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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP011973 Pseudomonas syringae pv. actinidiae ICMP 18884 plasmid unnamed, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP011972 Pseudomonas syringae pv. actinidiae ICMP 18884 chromosome, complete genome 0 crisprs RT,csa3,PD-DExK,DEDDh,cas3,DinG,WYL 0 0 25 0

Results visualization

1. NZ_CP011972
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 220726 : 284664 56 Planktothrix_phage(20.0%) transposase,protease NA
DBSCAN-SWA_2 287704 : 324802 47 Pseudomonas_phage(70.0%) integrase,terminase,plate,capsid,portal,tail,head,lysis,transposase attL 284734:284780|attR 321602:321648
DBSCAN-SWA_3 466371 : 539302 65 Pseudomonas_phage(42.42%) tRNA,plate,tail,lysis,transposase NA
DBSCAN-SWA_4 694803 : 756613 39 Ralstonia_phage(28.57%) transposase,protease NA
DBSCAN-SWA_5 921263 : 983794 58 Acinetobacter_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_6 1064628 : 1115586 43 Pseudomonas_phage(15.38%) transposase,tRNA NA
DBSCAN-SWA_7 1734469 : 1784283 49 uncultured_Caudovirales_phage(40.0%) transposase,integrase attL 1755662:1755675|attR 1787630:1787643
DBSCAN-SWA_8 2520967 : 2528919 9 uncultured_Caudovirales_phage(71.43%) tRNA NA
DBSCAN-SWA_9 2800797 : 2863634 55 Tupanvirus(28.57%) transposase,tRNA,integrase attL 2798718:2798777|attR 2868795:2870599
DBSCAN-SWA_10 2925509 : 2982872 44 Salmonella_phage(25.0%) plate,transposase NA
DBSCAN-SWA_11 3278778 : 3300841 17 Enterobacteria_phage(33.33%) transposase NA
DBSCAN-SWA_12 3307635 : 3359884 39 Acidithiobacillus_phage(57.14%) transposase,integrase attL 3301906:3301965|attR 3359910:3360021
DBSCAN-SWA_13 3533044 : 3579716 46 uncultured_Caudovirales_phage(27.27%) transposase,tail,integrase attL 3576041:3576055|attR 3582556:3582570
DBSCAN-SWA_14 3723533 : 3783908 53 Planktothrix_phage(28.57%) transposase,tRNA,integrase attL 3715104:3715121|attR 3753928:3753945
DBSCAN-SWA_15 3889151 : 3944091 60 uncultured_Caudovirales_phage(28.57%) holin,transposase,tRNA,integrase attL 3893770:3893829|attR 3947635:3949301
DBSCAN-SWA_16 4007597 : 4067953 38 Acidithiobacillus_phage(22.22%) transposase NA
DBSCAN-SWA_17 4494665 : 4527788 25 Pseudomonas_virus(25.0%) transposase NA
DBSCAN-SWA_18 4530841 : 4586785 43 uncultured_Caudovirales_phage(22.22%) transposase,tRNA,protease NA
DBSCAN-SWA_19 4723354 : 4788729 51 Pseudomonas_phage(28.57%) transposase,tRNA,protease NA
DBSCAN-SWA_20 4900731 : 4956713 54 Acinetobacter_phage(33.33%) transposase NA
DBSCAN-SWA_21 5023697 : 5161385 115 Pseudomonas_phage(20.0%) transposase,tRNA,integrase,protease attL 5085939:5085953|attR 5164280:5164294
DBSCAN-SWA_22 5205693 : 5215880 10 Burkholderia_virus(37.5%) NA NA
DBSCAN-SWA_23 5992694 : 6056540 49 Pseudomonas_phage(14.29%) holin,transposase NA
DBSCAN-SWA_24 6095706 : 6132667 28 Bacillus_virus(16.67%) holin,transposase,tRNA,protease NA
DBSCAN-SWA_25 6400864 : 6531863 93 Acidithiobacillus_phage(18.75%) transposase,integrase,protease attL 6466577:6466592|attR 6530029:6530145
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage