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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_HG969193 Bartonella tribocorum strain BM1374166 plasmid BM1374166, complete sequence 0 crisprs NA 0 0 0 0
NZ_HG969192 Bartonella tribocorum strain BM1374166 3 crisprs cas3 0 1 13 0

Results visualization

1. NZ_HG969192
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_HG969192_1 1165483-1165620 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_HG969192_2 1341870-1341995 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_HG969192_3 2365316-2365407 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_HG969192_2 2.1|1341918|30|NZ_HG969192|CRISPRCasFinder 1341918-1341947 30 MN693707 Marine virus AFVG_250M784, complete genome 13714-13743 8 0.733

1. spacer 2.1|1341918|30|NZ_HG969192|CRISPRCasFinder matches to MN693707 (Marine virus AFVG_250M784, complete genome) position: , mismatch: 8, identity: 0.733

aagccttcttttggcaaagggacaacttgt	CRISPR spacer
ccgccttcctttggctaagggacaagccga	Protospacer
  ******.****** ********* ..* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 315304 : 423752 108 Acidithiobacillus_phage(14.29%) tail,capsid,terminase,plate,integrase,head,tRNA,portal attL 316540:316557|attR 430962:430979
DBSCAN-SWA_2 476795 : 562029 98 Acidithiobacillus_phage(13.04%) tail,capsid,terminase,plate,integrase,head,portal attL 495292:495314|attR 572279:572301
DBSCAN-SWA_3 578410 : 591239 18 Lactobacillus_phage(16.67%) NA NA
DBSCAN-SWA_4 935743 : 1013986 60 Tupanvirus(11.76%) tail,protease,tRNA NA
DBSCAN-SWA_5 1018888 : 1028729 18 Mannheimia_phage(10.0%) NA NA
DBSCAN-SWA_6 1033038 : 1111325 57 Edwardsiella_phage(25.0%) integrase,portal,terminase attL 1069637:1069670|attR 1126089:1126122
DBSCAN-SWA_7 1242368 : 1363935 116 Ochrobactrum_phage(77.59%) tail,plate,tRNA,transposase,holin NA
DBSCAN-SWA_8 1449871 : 1520474 64 Ochrobactrum_phage(78.95%) transposase,tail,plate,tRNA NA
DBSCAN-SWA_9 1527907 : 1536353 6 uncultured_Mediterranean_phage(66.67%) NA NA
DBSCAN-SWA_10 1930765 : 1971991 51 Ochrobactrum_phage(82.05%) transposase,tail,plate NA
DBSCAN-SWA_11 2239977 : 2257742 18 Brucella_phage(20.0%) tail,portal,capsid,terminase NA
DBSCAN-SWA_12 2264381 : 2272027 11 Acidithiobacillus_phage(16.67%) integrase attL 2266429:2266444|attR 2272305:2272320
DBSCAN-SWA_13 2462884 : 2557387 89 Ochrobactrum_phage(67.5%) tail,protease,plate,tRNA,transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage