CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_HG322950	Pseudomonas knackmussii B13	2 crisprs	csa3,DEDDh,DinG,cas3	0	0	12	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_HG322950_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_HG322950_1

1100709-1100801

Orphan

Consensus_repeat	Method
CCGCCAATACGGCGAGGCCAAGTGGCAGGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_HG322950_1

>merge|NZ_HG322950|1|1100709-1100801|CRISPRCasFinder
CCGCCAATACGGCGAGGCCAAGTGGCAGGGGGAGAAGGTCATCGTCACCGGCCCCCCCCCCCCCCGCCAATACGGCGAGGCCAAGTGGCAGGG

>NZ_HG322950|1|1|1100709-1100801|CRISPRCasFinder
CCGCCAATACGGCGAGGCCAAGTGGCAGGG	GGAGAAGGTCATCGTCACCGGCCCCCCCCCCCC
CCGCCAATACGGCGAGGCCAAGTGGCAGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_HG322950.1\|WP_043249599.1\|1098718_1099363_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|370767
NZ_HG322950.1\|WP_043249595.1\|1096272_1097385_+\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	unknown	unknown	gnl\|CDD\|234737
NZ_HG322950.1\|WP_043249601.1\|1099364_1100507_+\|outer-membrane-protein-assembly-factor-BamB	unknown	unknown	gnl\|CDD\|274511
NZ_HG322950.1\|WP_052355183.1\|1095190_1096270_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|224343
NZ_HG322950.1\|WP_043249587.1\|1092815_1093247_+\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_HG322950.1\|WP_043249617.1\|1109584_1111693_+\|TonB-dependent-copper-receptor	unknown	unknown	gnl\|CDD\|273801
NZ_HG322950.1\|WP_043249583.1\|1091989_1092328_+\|ISC-system-2Fe-2S-type-ferredoxin	unknown	unknown	gnl\|CDD\|131062
NZ_HG322950.1\|WP_043249609.1\|1104308_1105262_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381307
NZ_HG322950.1\|WP_043249607.1\|1103436_1104231_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|143599
NZ_HG322950.1\|WP_043249614.1\|1106987_1108658_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|235154
NZ_HG322950.1\|WP_043249611.1\|1105602_1106469_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|188637
NZ_HG322950.1\|WP_043256942.1\|1093274_1094423_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|183031
NZ_HG322950.1\|WP_043249586.1\|1092339_1092540_+\|Fe-S-cluster-assembly-protein-IscX	unknown	unknown	gnl\|CDD\|377339
NZ_HG322950.1\|WP_043249621.1\|1113238_1113739_+\|copper-chaperone-PCu(A)C	unknown	unknown	gnl\|CDD\|225403
NZ_HG322950.1\|WP_043249619.1\|1111745_1113113_+\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|225723
NZ_HG322950.1\|WP_043256950.1\|1109109_1109475_+\|DUF2946-domain-containing-protein	unknown	unknown	gnl\|CDD\|371400
NZ_HG322950.1\|WP_043249612.1\|1106533_1106869_+\|DUF5629-family-protein	unknown	unknown	gnl\|CDD\|376055
NZ_HG322950.1\|WP_043249597.1\|1097403_1098693_+\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234586
NZ_HG322950.1\|WP_043249604.1\|1102300_1103449_+\|pyridoxal-phosphate-dependent-aminotransferase	unknown	unknown	gnl\|CDD\|181642
NZ_HG322950.1\|WP_043249590.1\|1094438_1095194_+\|type-IV-pilus-biogenesis/stability-protein-PilW	unknown	unknown	gnl\|CDD\|225605

Protein	Function_ID	Function_description	E-value
NZ_HG322950.1\|WP_043249599.1\|1098718_1099363_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|370767	pfam09976, TPR_21, Tetratricopeptide repeat-like domain. This family resembles a single unit of a TPR repeat.	5.69576e-63
NZ_HG322950.1\|WP_043249595.1\|1096272_1097385_+\|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase	gnl\|CDD\|234737	PRK00366, ispG, flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase.	0
NZ_HG322950.1\|WP_043249601.1\|1099364_1100507_+\|outer-membrane-protein-assembly-factor-BamB	gnl\|CDD\|274511	TIGR03300, assembly_YfgL, outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. [Protein fate, Protein and peptide secretion and trafficking].	2.64043e-162
NZ_HG322950.1\|WP_052355183.1\|1095190_1096270_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|224343	COG1426, COG1426, Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown].	2.24924e-48
NZ_HG322950.1\|WP_043249587.1\|1092815_1093247_+\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	2.39081e-90
NZ_HG322950.1\|WP_043249617.1\|1109584_1111693_+\|TonB-dependent-copper-receptor	gnl\|CDD\|273801	TIGR01778, TonB-copper, TonB-dependent copper receptor. This model represents a family of proteobacterial TonB-dependent outer membrane receptor/transporters which bind and translocate copper ions. Two characterized members of this family exist, outer membrane protein C (OprC) from Pseudomonas aeruginosa and NosA from Pseudomonas stutzeri which is responsible for providing copper for the copper-containing N2O reducatse. [Transport and binding proteins, Cations and iron carrying compounds, Transport and binding proteins, Porins].	0
NZ_HG322950.1\|WP_043249583.1\|1091989_1092328_+\|ISC-system-2Fe-2S-type-ferredoxin	gnl\|CDD\|131062	TIGR02007, 2Fe-2S_ferredoxin, ferredoxin, 2Fe-2S type, ISC system. This family consists of proteobacterial ferredoxins associated with and essential to the ISC system of 2Fe-2S cluster assembly. This family is closely related to (but excludes) eukaryotic (mitochondrial) adrenodoxins, which are ferredoxins involved in electron transfer to P450 cytochromes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	3.47072e-60
NZ_HG322950.1\|WP_043249609.1\|1104308_1105262_-\|aldo/keto-reductase	gnl\|CDD\|381307	cd19081, AKR_AKR9C1, AKR9C family of aldo-keto reductase (AKR). Haloferax volcanii aldo-keto reductase is a founding member of aldo-keto reductase family 9 member C1 (AKR9C1).	8.81787e-173
NZ_HG322950.1\|WP_043249607.1\|1103436_1104231_+\|amidohydrolase	gnl\|CDD\|143599	cd07575, Xc-1258_like, Xanthomonas campestris XC1258 and related proteins, members of the nitrilase superfamily (putative class 13 nitrilases). Uncharacterized subgroup belonging to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup either represents a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer. XC1258 is a homotetramer.	2.31133e-147
NZ_HG322950.1\|WP_043249614.1\|1106987_1108658_-\|2-isopropylmalate-synthase	gnl\|CDD\|235154	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated.	0
NZ_HG322950.1\|WP_043249611.1\|1105602_1106469_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|188637	cd00950, DHDPS, Dihydrodipicolinate synthase (DHDPS). Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.	1.80897e-119
NZ_HG322950.1\|WP_043256942.1\|1093274_1094423_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|183031	PRK11194, PRK11194, ribosomal RNA large subunit methyltransferase N; Provisional.	0
NZ_HG322950.1\|WP_043249586.1\|1092339_1092540_+\|Fe-S-cluster-assembly-protein-IscX	gnl\|CDD\|377339	pfam04384, Fe-S_assembly, Iron-sulphur cluster assembly. This family of proteins is likely to be involved in the assembly of iron-sulphur clusters. It may function as an adaptor protein. In Escherichia coli IscX forms part of the isc operon, which encodes genes involved in iron-sulphur cluster assembly. Its structure is entirely alpha helical, and it contains a modified wing-helix structure, usually found in DNA-binding proteins. It binds to Fe2+ and Fe3+ ions and to the cysteine desulfurase IscS, the same surface of the protein is involved in both binding to iron and to IscS.	8.39439e-34
NZ_HG322950.1\|WP_043249621.1\|1113238_1113739_+\|copper-chaperone-PCu(A)C	gnl\|CDD\|225403	COG2847, COG2847, Copper(I)-binding protein [Inorganic ion transport and metabolism].	2.77408e-50
NZ_HG322950.1\|WP_043249619.1\|1111745_1113113_+\|PepSY-domain-containing-protein	gnl\|CDD\|225723	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown].	2.8838e-135
NZ_HG322950.1\|WP_043256950.1\|1109109_1109475_+\|DUF2946-domain-containing-protein	gnl\|CDD\|371400	pfam11162, DUF2946, Protein of unknown function (DUF2946). This family of proteins has no known function.	6.38365e-08
NZ_HG322950.1\|WP_043249612.1\|1106533_1106869_+\|DUF5629-family-protein	gnl\|CDD\|376055	pfam18629, DUF5629, Family of unknown function (DUF5629). This is a domain of unknown function found in hypothetical proteins from Pseudomonas aeruginosa.	2.09447e-50
NZ_HG322950.1\|WP_043249597.1\|1097403_1098693_+\|histidine--tRNA-ligase	gnl\|CDD\|234586	PRK00037, hisS, histidyl-tRNA synthetase; Reviewed.	0
NZ_HG322950.1\|WP_043249604.1\|1102300_1103449_+\|pyridoxal-phosphate-dependent-aminotransferase	gnl\|CDD\|181642	PRK09082, PRK09082, methionine aminotransferase; Validated.	0
NZ_HG322950.1\|WP_043249590.1\|1094438_1095194_+\|type-IV-pilus-biogenesis/stability-protein-PilW	gnl\|CDD\|225605	COG3063, PilF, Tfp pilus assembly protein PilF [Cell motility and secretion / Intracellular trafficking and secretion].	1.20216e-77

>NZ_HG322950.1|WP_043249601.1|1099364_1100507_+|outer-membrane-protein-assembly-factor-BamB
MMRWNHAALLALTLLAVGCSSNSKKELPPAELTDIKEEVRLDKQWSRSVGDGQGDLYELLTPAVDGSTIYAAAAEGRVMAMQRESGDVLWKKDLDLPISGGVGVGGGLVLVGTLKGDVVALNAADGEQKWRTRVPSEVLSAPVTDGDVVVLQTQDDKLIALDASTGNQRWVYENTVPVLTLRGTGSPIIAGRMAIAGLASGKVVAVDLQRGLPAWETRVAVPQGRSELDRVVDIDGGLILDDNVIYVATYQGRAAALDLASGRVLWQREASSYAGVSEGMGNVYVSDASGTVESLDGRSSSSLWSNDALARRQLSAPAVFSSNVVVGDLEGYIHLLSQVDGRFVGREKVDGDGVRVRPLVVDKWMYVYGNSGKLVAYTIR
>NZ_HG322950.1|WP_043249599.1|1098718_1099363_+|tetratricopeptide-repeat-protein
MTTRTEEEQLADIKDWWQRNGSPLLTGAALALVVVFGWKAWTKYQANQAQGASILYQELVESSLTPSGKPDTARVAELAGKLTSEYGGTPYAQYGRLFVAKVAVDAGKLDDAASELKGVVDKPADATLGELARQRLARVLAAQGKAEEGLKLLEGTADKAFVANREELKGDLLVQLKRTDEARAAYEKAKAALPEDAASGALQVKLDDLAKGGA
>NZ_HG322950.1|WP_043249597.1|1097403_1098693_+|histidine--tRNA-ligase
MSKSLQAIRGMNDILPEQTPAWRYLERTFADLLDGYGYSEIRLPILEFTELFARGIGEGTDVVDKEMYTFLDRNEESLTLRPEGTAGTVRAVLEHGMTGGGQVQKLWYAGPMFRYEKPQKGRYRQFHQIGVEVFNLAGPDIDAELIVLTWRLWKKLGLADSVTLQLNSLGSSEARATYRDALVAFLKERYDQLDEDSQRRLTTNPLRILDSKNETTQALLVGAPTLHDYLDEESRVHFEGLKARLDAAGIAYEINPKLVRGLDYYSRTVFEWVTTKLGSQGTVCAGGRYDGLVTQFGGKPTPGVGFAMGVERLVLLLETLGLVPAELARPADLYVCAFGEPAELAALTLAERLRDALPGVRLLVNAGAGSFKSQFKKADKSGAQFALIMGDDELAARVVGFKPLRGEGEQQNIAWDALPEHLAACLKQA
>NZ_HG322950.1|WP_043249595.1|1096272_1097385_+|flavodoxin-dependent-(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate-synthase
MHCASPIKRRHSRKIWVGSVPVGGDAPIAVQSMTNTDTLDVAATVAQIRRLEEAGADIVRVSVPDMDAAEAFGKIKQQVQVPLVADIHFDYKIALRVAELGVDCLRINPGNIGREDRVRAVVDAARDKNIPIRIGVNAGSLEKDLQKKYGEPTPEALLESAMRHVDHLDKLDFQNFKVSVKASDVFMAVAAYRLLAKQIEQPLHLGITEAGGLRSGTVKSAVGLGMLLAEGIGDTIRISLAADPVEEIKVGFDILKSLHLRSRGINFIACPSCSRQNFDVVKTMNELEGRLEDLLVPLDVAVIGCVVNGPGEAKEAHIGLTGGTPNNLVYIDGKPAQKLQNENLVDELERLIRAKAAEKAEADAALIVRG
>NZ_HG322950.1|WP_052355183.1|1095190_1096270_+|helix-turn-helix-domain-containing-protein
MMKMSQPEVAVATRANPGETLRQAREHKGWSTSQVAGQLNLTENSLRHLEQGNFDQLPGHTFARGYVRAYAKLLGMDQAQMVTAFDQFTGTDATGSTPQSLGRVAEPMRLSRNLLRLFSLLLLALLVGFGYMWWQERSGRNVAENSGLNMEHVEVESADGTTEVHSLDEPEDQAVAEDKANTPAAPVEPVGDAGAGAPEQAAPAPTEQAPAAEAPAVAPAAPASAAAPSAPVAMAPAPTAPVVASAAPVVPAAPVAPGTAAAPVAPAAPAAAPVVAAAGQGVVKVQFTADCWTQVTDADGKVVLSALKRKGDSMEVAAKAPLELHLGFARGAQVSYNGQPVDIARYSRGETARMKLGGN
>NZ_HG322950.1|WP_043249590.1|1094438_1095194_+|type-IV-pilus-biogenesis/stability-protein-PilW
MTFRAALFVLLAGMLAGCVTTGKPDPLTTTKGREEARDAYIQLGIGYLQNGNTEQAKVPLRQALELDSSSADAHAALALVYQMEMEPKLAETEYRKALSSRSDARILNNYGGFLFEQKRYQEAIEAYEKAADDSMYPERSRVFENLGLVSLKMNQREQAKQYFEKALRLNRRQPSALLEMSQMSYDDRQYVPARGYYEEYLKQGQQNAKSLLLGVRLAKVFDDKDTAASYGLQLKRLYPASPEYQAYQAEK
>NZ_HG322950.1|WP_043256942.1|1093274_1094423_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MTDTAVKANLLGMTKPQLEEFFESIGEKRFRAGQVMQWIHHFGAEDFDAMTNVGKALREKLKACAEIRGPEVVSQDISSDGTRKWVVRVASGSCVETVYIPQNGRGTLCVSSQAGCALDCSFCSTGKQGFNSDLTSAEIIGQVWIANKSFGTVPGKIDRAITNVVMMGMGEPLLNFDNVVPAMNIMMEDFGYGISKRKVTLSTSGVVPMIEKLGEVTDVSLALSLHAPNDELRNVLVPINKKYPLAVLLDSCKRYITRLGKERVLTVEYTLLKDVNDQPEHAEQLIALLKEIPCKINLIPFNPFPHSGYERPSNNAIRRFQDLVHKGGYNVTVRTTRGDDIDAACGQLVGQVMDRTRRSERYIAVRQLAAEAEQTPTASTRN
>NZ_HG322950.1|WP_043249587.1|1092815_1093247_+|nucleoside-diphosphate-kinase
MALQRTFSIIKPDAVAKNVIGEILTRFEKAGLRVVASKMVQLSEREAGGFYAEHKERGFFKDLVAFMTSGPVIVQVLEGEDAILRNRELMGATDPKKAEPGTIRADFAVSIDENAVHGSDSEASAAREIAYFFSSTEVCERIR
>NZ_HG322950.1|WP_043249586.1|1092339_1092540_+|Fe-S-cluster-assembly-protein-IscX
MSLKWTDVLEIAIQLAESKPDVDPRYVNFVDLHNWVLALPEFSDDSSRGGEKVLEAIQAAWIEEAE
>NZ_HG322950.1|WP_043249583.1|1091989_1092328_+|ISC-system-2Fe-2S-type-ferredoxin
MPQIVFLPHAEHCPEGAVVEAQPGETIIKAALRNGIDIEHACEMSCACTTCHVVVREGFNSLEASDELEDDMLDKAWGLEPESRLSCQAVVGEEDLVVEIPKYTINQVSEGH
>NZ_HG322950.1|WP_043249604.1|1102300_1103449_+|pyridoxal-phosphate-dependent-aminotransferase
MLTSKLPNVGTTIFTRMSQLAAECGALNLSQGFPDFDGPAALREAVGRHVMAGHNQYCPMTGLPALREQVAAKVASFYGRTVSADTEVTITPGATEAIFCAVQALIRPGDEAIVLDPCYDSYEPSVELAGGRCVHVALSLPEFRIDWQRLADAITPRTRVIFLNSPHNPSGALIDREDLDRLAALIRDREIYVISDEVYEHLIYDGVQHASVLAHDELYPRAFVISSFGKTYHVTGWKTGYVVAPPALTAELRKIHQYVNFCGVTPLQYALADFMAAHPEHLRELPGFYQAKRDLFCDLLGGSRFQFRRAAGTYFQVVDYSAIRPDLDDVAMAEWLTREHGVAAIPVSVFYQQAPADMRLVRFCFAKKEETLRQAAEKLCAI
>NZ_HG322950.1|WP_043249607.1|1103436_1104231_+|amidohydrolase
MRDLNQLPDLKLALVQTTLAWHDAPANRAHFTALLEQARGADLVILPEMFTTGFSMDSSALAEAEEGETYSWLREQAARLDAVVTGSVIVRAADGSHRNRLLWARPDGEILHYDKRHLFRMAGEHKHYSAGENQAVFECKGWRVRPLICYDLRFPAWSRDAQDTDLLLYTANWPAARRLHWNRLLPARAIENLCYVAAVNRVGEDGKGHAYSGDSQVLDFQGDYLLEPGAADGVFHVNLSAQALAAYRERFPAYLDADRFVIEP
>NZ_HG322950.1|WP_043249609.1|1104308_1105262_-|aldo/keto-reductase
MNLRELGRSGLAIPPLVFGGNVFGWTADEATSFRLLDALHEAGLTCIDTADVYSRWVPGHAGGESETLIGKWLKKTGKRNDMILATKVGMDMGNGFKGLAPAYIEQAVERSLQRLQTDYIDLYQAHCDDTHTPLEETLDAFANLAQKGKVRVIGASNYDARRLREAKTIADQLGAPCYHSLQPNYNLYDRADYETRLEPVVQELGIGVICYYALAGGFLSGKYRSREDLDKSAARADKVKGYLNERGVTLLAALDEVAEEYDATPTQVSLAWLMARPSITAPIASASNLDQLPDLIAATRLKLSLEDIHRLDAASAY
>NZ_HG322950.1|WP_043249611.1|1105602_1106469_+|4-hydroxy-tetrahydrodipicolinate-synthase
MSSFRGIWVALVTPFRAGEIDFAALQALVGKLLEDGVAGFVVCGTTGEAAALSHAEQLAVLDAVLQWVPSQRVIMGLAGNNLRELLAFQQEVQQRPLAGVLVPAPYYIRPSQQGLEAFFRQVADASTVPVVLYDIPYRTGVRIERETLRRIVRHPRIAAIKDCGGDAETTMALIADGNVEVLAGEDVQIFGNLCLGGAGAISASAHVRADLYVHMQRLVEEGDLPGARRTFYRLLPWMQAAFAEPNPAAVKAALALQGQIDDELREPMQRCAPATLERLHGVLATLAD
>NZ_HG322950.1|WP_043249612.1|1106533_1106869_+|DUF5629-family-protein
MTDHTLYLLDQLEMADMLLIDGLHAWQFELDEALLDRAEAAADAGEPFASEEVVLRVEVVDGRDRRQWQFTYNEVMEAQHQAEDDSWILLQGEQEHRLCCLGAHSASGEDD
>NZ_HG322950.1|WP_043249614.1|1106987_1108658_-|2-isopropylmalate-synthase
MTMLKDPSKKYRPFTQITLPDRTWPDKVIDKAPIWLSTDLRDGNQSLIEPMDAEKKMRFFKCLVQVGLKEIEVGFPSASQTDFDFVRELIEGGHIPDDVTIQVLTQARDDLIERTFESLKGAKRAIVHYYNACAPSFRKIVFNQDKAGVKAIAVAAGKTIKRLADAAPETQWGFEYSPEVFSSTETDFAVEVCNAVIDVFQPTPANRLILNLPATIECATPNNYADQIEWFGRHIDKRDSVLLSLHTHNDRGTGVAASELALMAGADRVEGCLFGNGERTGNLCLVTMALNMYTQGIDPQLDFSDIDAVRKVVEECNQIPVHPRHPYVGDLVHTAFSGSHQDAIRKGFAQQKDDAVWEVPYLPIDPADIGRSYEAVIRVNSQSGKGGITFLLEQEYGISLPRRMQIEFSQVVQNETDRLGLEMTAEQIYALLEAEYLQVVTPFALKNYRLQEENGICAIDIDVVHKGEQHRWHGKGKGTLEALVAALPVDVEIMDYNEHAIGAGTTARAAAYIELRVEGGRSLHGIGIDENITTASFRALFSALNRAVTLGHAKAA
>NZ_HG322950.1|WP_043256950.1|1109109_1109475_+|DUF2946-domain-containing-protein
MAIWLAFFAMLMIHLGPLVSQSMPMDHVMPAMAGMDEMACSDEARSGHHESVMPKPAAGFMEKCGYCGLLIHSPVLDAPQLFLPADLPGAAPAPQVVIEHPIPASPVFPGARSRAPPSMTA
>NZ_HG322950.1|WP_043249617.1|1109584_1111693_+|TonB-dependent-copper-receptor
MSNSFLRGRARPAYLRTFCALAALGVVPFASAADSDPHADHSIIELEPAVITAVQQSSPLTIVTNPKEARQPVPASDGTDYLKTIPGFSAIRNGGTNGDPVLRGMFGSRLNLRTNGGLMIGACPFRMDAPSSYIAPETFDKLTVVKGPETVIWGPGASAGTVRFDREPEHFGELGSRLNGSVLAGSNGRFDKVIDGAVGGPQGYLRVVGNQAQADDYKDGNGDTVPSRWDKWNGDVAAGWTPDADTLVELTAGKGNGKARYAGRGMDGSQFKRESLGLRFEKRNISEVFQKLEAQVYYNYADHIMDNFRLRTPDPSSMMPMPMASEVDRRTVGGRVAATLDWSDYQLVTGVDALRSEHRERNSSFDMMSDTFTDTDAFPWTKDAVMHDYGAFAELTWYAAERSRVIGGARLDRADAKDYRQTLGSMSMSMPNPTAGDTRSDTLPSAFARYEHDLADSPTTLYAGLGYVERFPDYWELFSPSNGPSGSVNAFDAIKPEKTTQLDIGAQYDDGKLQAWVSAYAGVVHDFILFDYDTDMMGMSSTQARNINARIMGGELGASYRLDSNWKTDTTLAYAWGKNTTDGRALPQMPPLEARLGLTYERDLWSVGGLWRLVAAQNRVAIGEGNVVGQDFDKTGGFGVFSLNGAYKLSKNFKVSTGIDNLFDKAYAEHLNLAGDAGFGFPGDKAINEPGRTYWTKVDFSF
>NZ_HG322950.1|WP_043249619.1|1111745_1113113_+|PepSY-domain-containing-protein
MKKTVDFYNLAWRWHFYAGLFVAPFMILLAFTGIIYLFKPQLDVLMYRDLLEVQPAAQVLSADEQLARLHQALPQAAVSKYLPPATAESSAQFVASLDGRETNLFVNPYSGELLGSQDAHYNLQAIARALHGELMIGTVGDRLIELAAGWGIVLVVSGVYLWWPRGRGKRGVLVPNREQRGRGWWRELHAVTGFWGAALLLFMLLSGMTWTGYWGESFADVWNRFPAAMWNDVPKSDVQARSLNEAHRQTVPWAMENTPMPVSGAHAEHAGHMAGGSMAAPQIGLQQVVDIARERGVTPGYSISLPKGEEGVFTVSVFADDPRNDATLHVDQYSGKVLADVRWKDYGLVARSVETGVMLHEGKMFGLANQLLMLAVCLMILFSAASGLWLWWLRKPAGRLGVPPLPHALPVWKVGLGIVVLLGIAFPLVGASLLLVWGFDWLVLSRLASGRQAFD
>NZ_HG322950.1|WP_043249621.1|1113238_1113739_+|copper-chaperone-PCu(A)C
MRKTLLAFAALLSFSAPLLAHEYKAGDLEIEHPWSLLLPAVSANGAAYFVVHNHGKSADRLVGADTERAASAEVHEHVMKDGMMKMQKVEGVDIPAGGTLTFAPGHYHLMLFGLKKPLADGERFPVTLHFQKAGDVKVEVEVQKQAPGAAEHDDHDMSDMPGMKMN

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Crispr_ID: NZ_HG322950_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_HG322950_2

6108442-6108559

Orphan

Consensus_repeat	Method
CACCGAGCCACCGATGTCTGTGCCGACGTGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_HG322950_2

>merge|NZ_HG322950|2|6108442-6108559|CRISPRCasFinder
CACCGAGCCACCGATGTCTGTGCCGACGTGCACCGAGGCTCGGCTTGAACCCGGCCAGCCCGCACCAGCCGGCCGGCAGGCGGGCCCACCGAGCCACCGATGTCTGTGCCGACGTGCA

>NZ_HG322950|2|2|6108442-6108559|CRISPRCasFinder
CACCGAGCCACCGATGTCTGTGCCGACGTGCA	CCGAGGCTCGGCTTGAACCCGGCCAGCCCGCACCAGCCGGCCGGCAGGCGGGCC
CACCGAGCCACCGATGTCTGTGCCGACGTGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_HG322950.1\|WP_043256663.1\|6111573_6112539_-\|L-carnitine-dehydrogenase	unknown	unknown	gnl\|CDD\|168796
NZ_HG322950.1\|WP_043256670.1\|6115896_6116367_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|377770
NZ_HG322950.1\|WP_043256659.1\|6109310_6109559_-\|hypothetical-protein	unknown	unknown	unknown
NZ_HG322950.1\|WP_043256672.1\|6116441_6118061_-\|alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|235000
NZ_HG322950.1\|WP_043256661.1\|6111048_6111522_-\|4-hydroxybenzoyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|236044
NZ_HG322950.1\|WP_043256652.1\|6102540_6103467_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224005
NZ_HG322950.1\|WP_043256642.1\|6095005_6095842_-\|xanthine-dehydrogenase-accessory-protein-XdhC	unknown	unknown	gnl\|CDD\|274366
NZ_HG322950.1\|WP_043256641.1\|6092880_6094809_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_HG322950.1\|WP_043256656.1\|6104427_6105993_+\|alkyl-hydroperoxide-reductase-subunit-F	unknown	unknown	gnl\|CDD\|237942
NZ_HG322950.1\|WP_043256644.1\|6098197_6099622_-\|xanthine-dehydrogenase-small-subunit	unknown	unknown	gnl\|CDD\|274365
NZ_HG322950.1\|WP_043256643.1\|6095838_6098205_-\|xanthine-dehydrogenase-molybdopterin-binding-subunit	unknown	unknown	gnl\|CDD\|274367
NZ_HG322950.1\|WP_043256665.1\|6112664_6113552_-\|3-keto-5-aminohexanoate-cleavage-protein	unknown	unknown	gnl\|CDD\|225785
NZ_HG322950.1\|WP_043256654.1\|6103680_6104244_+\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
NZ_HG322950.1\|WP_043256669.1\|6114772_6115726_+\|GlxA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|227311
NZ_HG322950.1\|WP_043256650.1\|6101373_6102474_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226962
NZ_HG322950.1\|WP_043256658.1\|6106118_6107543_-\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_HG322950.1\|WP_043256667.1\|6113621_6114560_-\|choline-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|188316
NZ_HG322950.1\|WP_043256647.1\|6099833_6101363_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226364
NZ_HG322950.1\|WP_043257882.1\|6110125_6111025_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_HG322950.1\|WP_043256673.1\|6118183_6119017_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213260

Protein	Function_ID	Function_description	E-value
NZ_HG322950.1\|WP_043256663.1\|6111573_6112539_-\|L-carnitine-dehydrogenase	gnl\|CDD\|168796	PRK07066, PRK07066, L-carnitine dehydrogenase.	0
NZ_HG322950.1\|WP_043256670.1\|6115896_6116367_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|377770	pfam07080, DUF1348, Protein of unknown function (DUF1348). This family consists of several highly conserved hypothetical proteins of around 150 residues in length. The function of this family is unknown.	1.96709e-95
NZ_HG322950.1\|WP_043256672.1\|6116441_6118061_-\|alcohol-dehydrogenase	gnl\|CDD\|235000	PRK02106, PRK02106, choline dehydrogenase; Validated.	0
NZ_HG322950.1\|WP_043256661.1\|6111048_6111522_-\|4-hydroxybenzoyl-CoA-thioesterase	gnl\|CDD\|236044	PRK07531, PRK07531, carnitine 3-dehydrogenase.	1.84728e-45
NZ_HG322950.1\|WP_043256652.1\|6102540_6103467_+\|ABC-transporter-permease	gnl\|CDD\|224005	COG1079, COG1079, Uncharacterized ABC-type transport system, permease component [General function prediction only].	1.02127e-102
NZ_HG322950.1\|WP_043256642.1\|6095005_6095842_-\|xanthine-dehydrogenase-accessory-protein-XdhC	gnl\|CDD\|274366	TIGR02964, conserved_hypothetical_protein, xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products. [Protein fate, Protein folding and stabilization, Purines, pyrimidines, nucleosides, and nucleotides, Other].	2.59746e-105
NZ_HG322950.1\|WP_043256641.1\|6092880_6094809_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	7.5432e-79
NZ_HG322950.1\|WP_043256656.1\|6104427_6105993_+\|alkyl-hydroperoxide-reductase-subunit-F	gnl\|CDD\|237942	PRK15317, PRK15317, alkyl hydroperoxide reductase subunit F; Provisional.	0
NZ_HG322950.1\|WP_043256644.1\|6098197_6099622_-\|xanthine-dehydrogenase-small-subunit	gnl\|CDD\|274365	TIGR02963, Includes:_Xanthine_dehydrogenase, xanthine dehydrogenase, small subunit. Members of this protein family are the small subunit (or, in eukaryotes, the N-terminal domain) of xanthine dehydrogenase, an enzyme of purine catabolism via urate. The small subunit contains both an FAD and a 2Fe-2S cofactor. Aldehyde oxidase (retinal oxidase) appears to have arisen as a neofunctionalization among xanthine dehydrogenases in eukaryotes and [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_HG322950.1\|WP_043256643.1\|6095838_6098205_-\|xanthine-dehydrogenase-molybdopterin-binding-subunit	gnl\|CDD\|274367	TIGR02965, xanthine_dehydrogenase, xanthine dehydrogenase, molybdopterin binding subunit. Members of the protein family are the molybdopterin-containing large subunit (or, in, eukaryotes, the molybdopterin-binding domain) of xanthine dehydrogenase, and enzyme that reduces the purine pool by catabolizing xanthine to urate. This model is based primarily on bacterial sequences; it does not manage to include all eukaryotic xanthine dehydrogenases and thereby discriminate them from the closely related enzyme aldehyde dehydrogenase. [Purines, pyrimidines, nucleosides, and nucleotides, Other].	0
NZ_HG322950.1\|WP_043256665.1\|6112664_6113552_-\|3-keto-5-aminohexanoate-cleavage-protein	gnl\|CDD\|225785	COG3246, COG3246, Uncharacterized conserved protein [Function unknown].	6.90748e-137
NZ_HG322950.1\|WP_043256654.1\|6103680_6104244_+\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.00734e-123
NZ_HG322950.1\|WP_043256669.1\|6114772_6115726_+\|GlxA-family-transcriptional-regulator	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	1.15625e-132
NZ_HG322950.1\|WP_043256650.1\|6101373_6102474_+\|ABC-transporter-permease	gnl\|CDD\|226962	COG4603, COG4603, ABC-type uncharacterized transport system, permease component [General function prediction only].	9.61104e-118
NZ_HG322950.1\|WP_043256658.1\|6106118_6107543_-\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	0
NZ_HG322950.1\|WP_043256667.1\|6113621_6114560_-\|choline-ABC-transporter-substrate-binding-protein	gnl\|CDD\|188316	TIGR03414, ABC_choline_bnd, choline ABC transporter, periplasmic binding protein. Partial phylogenetic profiling () vs. the genome property of glycine betaine biosynthesis from choline consistently reveals a member of this ABC transporter periplasmic binding protein as the best match, save for the betaine biosynthesis enzymes themselves. Genomes often carry several paralogs, one encoded together with the permease and ATP-binding components and another encoded next to a choline-sulfatase gene, suggesting that different members of this protein family interact with shared components and give some flexibility in substrate. Of two members from Sinorhizobium meliloti 1021, one designated ChoX has been shown experimentally to bind choline (though not various related compounds such as betaine) and to be required for about 60 % of choline uptake. Members of this protein have an invariant Cys residue near the N-terminus and likely are lipoproteins. [Transport and binding proteins, Amino acids, peptides and amines].	1.4752e-164
NZ_HG322950.1\|WP_043256647.1\|6099833_6101363_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226364	COG3845, COG3845, ABC-type uncharacterized transport systems, ATPase components [General function prediction only].	0
NZ_HG322950.1\|WP_043257882.1\|6110125_6111025_-\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	1.09425e-75
NZ_HG322950.1\|WP_043256673.1\|6118183_6119017_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	2.21737e-125

>NZ_HG322950.1|WP_043256658.1|6106118_6107543_-|cardiolipin-synthase
MSYSTYIAHLLVLIQLLGIVAAVHAVLTVRTAQGAIAWATSLAFMPLLTLLPYLVFGLRRFDAYIEARRQADQEMHRVAAELDWRPWVDEALAARQSSRYKALKAMSALARMPTLANNRVRLLINGKAAFDAMFEAIGQARKVVLVQFFILRDDALGQRLAQLLLERAANGVEVFVLYDAIGSHALPGRYVEQLRAGGVQVQAFSTGSGAINRFQLNFRNHRKIVVVDGATGFLGGLNVGVEYLGEKPPLSPWRDTHVALRGPAVACLQESFAEDWFWAARALPTLLVPDAFDSDGMLCQVVPSGPADKQETCSLFFVEAIHAASERVWITTPYFIPDEAVAAALRLAVLRGVDVRILLPSRPDHRTVYAVSSLYAQDAVRAGVRVFRYQPGFLHQKVMLVDRDFASVGSANLDNRSFRLNFEATLVTVDEGFASEVESMLLADFEDSVEMGLERSGRLQQLGMRVARLAAPIL
>NZ_HG322950.1|WP_043256656.1|6104427_6105993_+|alkyl-hydroperoxide-reductase-subunit-F
MLDANLKTQLKAYLEKVTQPFEIVASLDDSDKSRELSELLHDIVGLTDKITLREDGKDARVPSFSLNRPGANIGLAFAGIPMGHEFTSLVLALLQVGGHPSKLEAEVIEQVKGIQGKFEFETYFSLSCQNCPDVVQALNLMAVLNPNIRHVAIDGALFQEEVERRQIMSVPSIYLNGEVFGAGRMGVEEILAKIDTGAAAREAEKLSAKDAFDVLVVGGGPAGAAAAIYAARKGIRTGVAAERFGGQVLDTMAIENFISVQETEGPKLARALEEHVKQYEVDIMNLQRASALVPAKNAGELHEVKFEGGGSLKAKTLILATGARWREMGVPGEQEYKAKGVCFCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVSHVTLLEFDSKLRADAVLQRKLYSMPNVEVITSALTSEVKGDGQKVTGLVYKDRNTDEFKSVELEGIFVQIGLLPNSEWLKGSIELTPRGEIIVDQRGETSLPGIFAAGDVTTVPYKQIVIAVGEGAKASLSAFDHLIRSSAPA
>NZ_HG322950.1|WP_043256654.1|6103680_6104244_+|peroxiredoxin
MNLINTQVQPFKVNAFHNGKFIEVTEQSLKGKWSVLIFMPAAFTFNCPTEIEDAANNYAAFRDANTEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETLRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI
>NZ_HG322950.1|WP_043256652.1|6102540_6103467_+|ABC-transporter-permease
MDIDLLGNVLFAMVRTGTPLLLVALGELVCEKSGVLNLGQEGMMLFGAVIGFMVAFSTGSLWLGVLFAILAGMLLASLFAAVALGLNANQVACGLALTIFGVGLSSFVGAAWVGKPLQGFAPLALPWLAQLPVLGKMLFAQDALVYLSFALFAGVAWLLLKSRAGLVIQAVGENPDAAAAMGLPVLRVRLLAVLFGGAMAGLAGAYLSLAYTPMWAENMSAGRGWIALALVVFASWRVLRVLLGAWLFGLASILHLVAQGVGLSIPANLLAMLPYVATIVVLVLLSRDGLRTRLFAPVSLGQPWKAGH
>NZ_HG322950.1|WP_043256650.1|6101373_6102474_+|ABC-transporter-permease
MLLSLDPRGQQSRLMLLLSPLLAGLLTLLCGAALFAALGHPPLATLHTLLIEPVQDWYGVGELLVKATPILLCALGLALAYQARIWNIGAEGQLLVGALAGSAMALQLLGWESRWALVWTLLAGIAGGAAWAALVAWLRTHCNANEILTSIMLNYIALNLLLFCVHGPLKDPQGFNFPQSALFADSARLPTLFDDSRMHLGALFALFALVAVWVLAQRSFVGFQIKVLGLDRRAAGFVGFREKRLVWLALLLSGALAGLAGVCEVTGPIGQLVPQVSPGYGYAAITVAFLGRLNPIGILFASLLMALLYLGGETAQMSLNLPLALTGLFQGMMLFFLLACDVLILYRLRFSGGFRLQAARRKLSFS
>NZ_HG322950.1|WP_043256647.1|6099833_6101363_+|ABC-transporter-ATP-binding-protein
MSTTAPPRLELRAISKRYPGCLANDRVDLSIQPGEIHAMLGENGAGKSTLMKIIYGVTRPDSGELFWDGRAVSVKDPAQARALGIGMVFQHFSLFETLTVAENIALALGAAAGTPRQLAPRIREVSQRYGMPLEPERLVHGLSIGERQRVEIVRCLMQDIRLLILDEPTSVLTPQEAEDLFAVLRRLAAEGCSILFISHKLAEVRALCERATVLRGGRVSGDCVPAQCSDLELARLMVGDAEGLEAQYPKAQGGEALLQVSGLHRRSADPFGVSFAGLDLEVRAGEIVGIAGVAGNGQDELLALLSGEQRLPRAQAEAIRIAGEAIAHLPPDARRARGQAFVPAERLGHGAVPEMSLADNALLTGFQHGLVRHGLVQRGKVRAFADAIIQRFGVKTPDAQAAARSLSGGNLQKFILGREILQQPRLLIAAHPTWGVDVGAAAVIHRALIALRDAGAAILVISEDLDELFQISDRIGALCSGRLSPLVETAATDPLAVGRWMAGQFDAAA
>NZ_HG322950.1|WP_043256644.1|6098197_6099622_-|xanthine-dehydrogenase-small-subunit
MIQFLLDEELRQVDGLAPETSLLDYLRTQLGRTGTKEGCASGDCGACTVVLAEPEGEGLRYRAVNACITPIGAVHGRQLLTVESLAEAERLHPVQQAMVDCHGAQCGFCTPGIVMSLFAWHHAPCSHDRESALTALSGNLCRCTGYRPILDAAGKIAAEPDADRFSANEQAIAERLRALPADASLDCDEQHAFLPTSLDALDALLTNYPQARLVAGATDLALEATQALKSFPQLIHLERVAELRRLEEHPDHLLIGAARPYADCLDALHAFPGVPELLERLGSLQIRQRGTLGGNVANASPIGDMPPVLLALDARLRLRRAGEVREVPVDGFFTGYRQSVLQPGEYIETIVIPRLGGGQLFRVDKISKRRDDDISAVCLALRLDLDEQGSVRDVRLACGGMAATPLRGRKTEAALCGRPFDAAAVAAAQAALAEDFQPIDDLRASAAYRLKVAQNLLQRALLEWTPVIAEVRHA
>NZ_HG322950.1|WP_043256643.1|6095838_6098205_-|xanthine-dehydrogenase-molybdopterin-binding-subunit
MRSLPPLASNGAVEDIHSAGRPKTHDSAELHVSGAARYVDDIKEPRDLLYAAVGLSEIACGAIHSLDLDAVRAAPGVVAVLTLDQVPGHTDIGPVFPGDPLLAGDRVKHHGQALFAVAAETQLQARRAARLAKVEYTEETPLLDPLQAKAEERFVRPPHFMRRGDAEHALAASPYVLHAGQFVGGQEHFYLEGQASMAVPTDDGGMFVFTSSQHPSEVQKLVAEVLAIPLAKVTVEVRRMGGGFGGKETQAAPWACLAALLARQTGRAVKLRLPRADDMRLTGKRHPFHNQYQVGFDAEGRLLAAQLEVVGDCGHSPDLSDAIVDRAMFHADNAYFIPAVSIAGYRSFTNIVSHTAFRGFGGPQGMMLIERAMDDIARAVGQDPLDVRKLNLYGGSGRDLTPYHQRVEHNLLGELIERLEVSSDYRVRRAAIGQFNAASPVLKRGLALTPVKFGISFTAQHLNQAGALVHLYTDGSIQLNHGGTEMGQGLNTKVAQIVAEEFQVPLARVSITATRTDKVPNTSPTAASSGTDLNGMAARDAARTLKRRLAEFLAAREGGTPQEVRFEHGQVRVAGKALDFAEVVQAAYFARVQLSATGFYRTPKIHYDRETGQGHPFFYFAYGAAVSEVEVDTLTGEYRLLRVDILHDVGRSLNPAIDIGQIEGGFVQGMGWLTTEELKWDAKGRLLTTGPATYKIPAASDVPEDFRVALFDRPNEEDSVYLSKAVGEPPFMLAISVWSALRDAIASLADYRVSPALDTPATPERVLWACEALRAVDKPKTVAVEEPV
>NZ_HG322950.1|WP_043256642.1|6095005_6095842_-|xanthine-dehydrogenase-accessory-protein-XdhC
MTPTWMDAIARLRDGAEPYVLVTVVGVQGSTPRESGCKMLVTADTCYDTIGGGHLELAATEHARQLLLAGKDAQSLEHFPLGARLGQCCGGRASLLFECFAVRGPQVLLFGAGHVGRALAPLLAGLPLRLEWVDSRAGEFPAELPTGVRASLLDDPLEAVDKAAAGSYYLIMTHNHPLDYALAEAVLKRGDAGFLGMIGSQTKAQRFRLRLEQRGFSTGAIESMHCPIGLPGIPGKRPLEVAIAVAAQVVARYHQDAPMRATRSGVEWKALCSETAHT
>NZ_HG322950.1|WP_043256641.1|6092880_6094809_-|methyl-accepting-chemotaxis-protein
MRLRSIQTQLILSMGAALLISLLIVLGLYAVLVNRLSERYLLDQALPASIAAIRNDFERQLTGPLTAAADIAGNSLAQDWLAAGEDPARQADFVRYLGGVRTSQNAFAALMVGQASSAYYSDKGKERTLSRDNPQDTWYFHFIESGQAQVLNIDTDVGSGKLTLFIDRRIERDGKLLGIAGLGLNVDELSQLIRDFRFGKSGRVYLVKNDGQVQIHPDPAQAKGKALADLVGREAASALLGHRDFQSAQFERDGEDYLAASLPLHDLGWTLVSEVPQAEIYADAHSALRLSGLAGAAVAALCLLLVVLLARGLARPIRQVTAALLEIGAGGGDLTRRLDDSRADELGDLARGFNRFLEGQRALISAVLATSQQLQRSVGEVARVVDNTAERAGRQQDMTDMVATAVNEMGSTVQEIARNAEQAASASQQARSEAGEARQVVGGSLQHSQRMSDEIGHAAGVVGDLADQVAGIDQVLAVIRGISEQTNLLALNAAIEAARAGELGRGFAVVADEVRTLAGRTQGSTDEIQAMIQRLKQGADLAVSSMQSGQAATGEGLQASRRAGESLGSIADQVERISDINHQVAAATEEQSAVTEEINRNVQGIADLARATAGEVHQGREQCQTLRSLADDLQRQMGQFRL
>NZ_HG322950.1|WP_043256659.1|6109310_6109559_-|hypothetical-protein
MMHADLIDQDDFRERLQALGFAVPPDVTAEQACEYAVRALTPERSMALRRLVEEMLGGHATLLPAVREAISRQLLPALVPRP
>NZ_HG322950.1|WP_043257882.1|6110125_6111025_-|alpha/beta-hydrolase
MAAFVALTRSFASADPSLQAQREAYARMATAFSPPLPAGLQVRDLAPTGLPPLRLYLPKVAAPEVGWPAVLFLHGGGWMLGGLDSHAFLCQELALRLKVAVLAVDYRLAPEHPFPAALEDSLAAWRFLRDGALGIPLDRSRLAVAGDSAGGNLAAALCLALRDADEPQPRLQALIYPALGDQPTASSTECADAPLLSTADMQACLDAYLPVDSLRHCPLALPLRAHDLSDLAPAVIAVAEFDPLRDDGQLYAQRLQEARVPVDYFPGAGLVHGCLRARQLPEVDRLYEALFEALAKRLL
>NZ_HG322950.1|WP_043256661.1|6111048_6111522_-|4-hydroxybenzoyl-CoA-thioesterase
MHALKTYETPVLAEWTDYNGHLRDAFYLLIFSYATDALMDHLGLDEAHRAATHDSLFTLEIHLNYLHEVKQGEAVEVRTQLIAHDRKRLHVFHSLHRAGEDLALAASEQMLLHVNLEGGARSAPFEGVVLERVLALAEAHRSLPRPDYVGRTIGLPG
>NZ_HG322950.1|WP_043256663.1|6111573_6112539_-|L-carnitine-dehydrogenase
MAYITEIKTFAALGSGVIGSGWIARALAHGLDVIAWDPAPGAEAVLRQRVANAWPALQKAGLAPGASQDRLTFVATIEECVRNADFIQESAPERLGLKLDVHAKISAAAKPDAIIASSTSGLLPSEFYADAIHPERCVVGHPFNPVYLLPLVEVVGGEKTDPAAVQAAISVYSSLGMRPLHVRKEVPGFIADRLLEALWREALHLVNDGVASTGEIDDAIRFGAGLRWSFMGTFLTYTLAGGNAGMRHFMAQFGPALQLPWTYLPAPELTESLIDKVVEGTSEQQGSRSIAELERYRDDCLLAVLGAIKDTKARHGFAFVD
>NZ_HG322950.1|WP_043256665.1|6112664_6113552_-|3-keto-5-aminohexanoate-cleavage-protein
MNYEVIVTCAVTGAGDTVGKHPAIPVTPKEIAAAAIEAAKAGATVAHCHVRDPKTGKPSRDVNLYREVVERIRESDTDVIINLTAGMGGDLEIGKGEQPLEFGAGTDLVGPLERLKHVEELLPEICTLDCGTLNFGDGDFIYVSTPAQLRAGAKRITELGVKAELEIFDTGHLWFAKQMLKEGLLEDPLIQICLGIPWGAPADTTTMKAMADNIPDGLTWAGFGIGRSQMPMVAQAMLLGGNVRVGLEDNIWLDRGVHASNGQLVERAIEIIERLGGRALTPAEGRKKMNLKPRG
>NZ_HG322950.1|WP_043256667.1|6113621_6114560_-|choline-ABC-transporter-substrate-binding-protein
MKRMIKAVGCAAAVLASQSPWAAEQASCQDVRMGVVAWTDVVATSAMGDVLLESLGYRVKQTNAVQQIIFSGIRDNRLDIFLGYWKPAMDKNIAPFLQAKQVTVLEKPSLADAQATLAVPDYVYDGGLKTFADIAKYRDKLGNKIYGIEPGTGANANIKGMIDKDQFGLKGFQLVESGEAGMLAAVKRAGQRNEWVVFVGWTPHPMNINMKMHYLTGSQDVFGPDEGRASVSVVTAPDYAQRCPNVSRLLSNLTFSAAQESQLMVPIMERKDPKDVARQWLKDHPEDAKRWLDGVTTFDGKPADPAALTAAN
>NZ_HG322950.1|WP_043256669.1|6114772_6115726_+|GlxA-family-transcriptional-regulator
MSNDFWFLLLPGFSVMGFVSAVEPLRVANRFRGELYRWHLCSVDGGPVLASNGMSMNADSGLETLRRGDTLFVVAGFDPLGTCNPALVHWLRWLDREGVTLGGIDTGSFVLAEAGLLEGRRCTLHWEALDAFRESYPQLEATQELFEIDGPRITSAGGTASIDLMLDLIARAHGPELAVQVSEQFVVGRIRTRQDHQRLQLASRYGVTNKKLIQVLGKMERHTEPPLSTLELAEHIQVTRRQLERLFRLHLHDTPSNFYLGLRLDKARQLLRQTDMSVLEVGLACGFESPSYLSRSYRAKFGVCPSHDRAALPRVAT
>NZ_HG322950.1|WP_043256670.1|6115896_6116367_+|nuclear-transport-factor-2-family-protein
MSEQRPPLPPFTRETAIQKVRAAEDGWNSRDPQRVSLAYSPDSQWRNRSTFLRGRPQIVEFLAAKWRREQEYRLIKELWAFTDNRIAVRFAYEWRDDSGNWFRSYGNENWAFDENGLMFERHASINDLPISEGERLFRWPLGRRPDEHPSLSDLGL
>NZ_HG322950.1|WP_043256672.1|6116441_6118061_-|alcohol-dehydrogenase
MPHDPNAYDYLIVGAGSSGCVLANRLSADPSVRVCLLEAGGSDASPRIQTPAGTITLYKSRTYSWNFFSAPQKRLNDRALHCPRGKALGGSSSMNSMIYIRGHASDYDRWAELGCEGWSWREVLPYFRKSEGNRLGQDLALHGTQGELWVDRPRDPNPLSHLFVKAAQRIGLRHNDDFNGRELEGAGIYNVTQKDAKRLSSYRAFVAPLQRPNLTVLTDCQVHRLLLDGARVTGLELRSGERLLASREVLLSAGSLGSPQILLASGIGPRDELQAAGIEARHHLPGVGKNLQDHLDGLVTVRSPSPLSLGFSLGSLGQVLLSPFKYLLRRKGWLTTNYVEAGGFARTSLADGLADVQFHFVPGYRSHRGRLFEWGHGYAIHTCVLRPKSIGELRVKPGGDIEIDYNFLADEADGRVLVEGVKLARKILAQPEFDAIRGAEMLPGPQVQSDEQLLEHLRDHAATVFHPVGTCKMGHDPMAVVDPQLRVHGLKGLRVVDASIMPTLVSGNTNAPCIMIGEKAAAMILAERFAPVASAAVPA
>NZ_HG322950.1|WP_043256673.1|6118183_6119017_-|ABC-transporter-ATP-binding-protein
MGAVTAMHRNDAAPAAQGAQQPRLRVEQVSLRYRTPDGGTFAALDKVSFEVPDQQFAVIVGPSGCGKSSLLYLTAGLSEPTDGDIYVGGKRVEGPGPDRGMVFQSYTLFPWLTVRENIEFGLKRRGMPASERKEIVDYYLNEVGLANFAGNYPKQLSGGMMQRVAIARALANDPQILLMDEPFGALDSQTRMQMQKLLLRVWDHSKKTVVFVTHDIDEAILLGDRVYVMGARPGRIKRILDVPIERPRSLDMVMDRQFIDMKREILGLLHDDLEEAH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

580685 : 639352

uncultured_Caudovirales_phage(27.59%)

tail,tRNA,plate,holin

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043248811.1\|580685_581711_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	1.3e-106	56.1
WP_043248812.1\|581805_582375_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_043248814.1\|582457_582811_+	dihydroneopterin aldolase	NA	NA	NA	NA
WP_043248815.1\|582801_583338_+	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_043248817.1\|583413_584649_-	multifunctional CCA addition/repair protein	A0A076G5T8	Escherichia_phage	9.1e-78	42.4
WP_043248819.1\|584749_585259_-	DUF4136 domain-containing protein	NA	NA	NA	NA
WP_043248820.1\|585317_586871_-	SpoVR family protein	NA	NA	NA	NA
WP_043248822.1\|586867_588139_-	YeaH/YhbH family protein	A0A140HLI1	Bacillus_phage	1.9e-09	38.1
WP_043248824.1\|588241_590164_-	PrkA family serine protein kinase	NA	NA	NA	NA
WP_043248826.1\|590443_590773_-	thiosulfate sulfurtransferase GlpE	NA	NA	NA	NA
WP_043248828.1\|590793_591618_-	symmetrical bis(5'-nucleosyl)-tetraphosphatase	A0A2H4J0P0	uncultured_Caudovirales_phage	2.1e-09	34.0
WP_043248830.1\|591617_591998_-	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA
WP_043248831.1\|592027_592834_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	NA	NA	NA	NA
WP_043248832.1\|592942_593941_-	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA
WP_043248834.1\|594075_595368_-	peptidylprolyl isomerase SurA	NA	NA	NA	NA
WP_043248835.1\|595348_598138_-	LPS-assembly protein LptD	NA	NA	NA	NA
WP_043248837.1\|598266_599283_+	phosphotransferase	NA	NA	NA	NA
WP_043248839.1\|599279_599954_+	nucleotidyltransferase family protein	NA	NA	NA	NA
WP_043248841.1\|599954_600713_+	DnaJ domain-containing protein	NA	NA	NA	NA
WP_043248843.1\|600720_601704_-	alpha/beta hydrolase family protein	NA	NA	NA	NA
WP_084166560.1\|601855_604282_+	PAS domain S-box protein	NA	NA	NA	NA
WP_043248845.1\|604334_604964_+	response regulator transcription factor	NA	NA	NA	NA
WP_156958108.1\|605095_606133_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_043248846.1\|606335_607445_+	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.2e-29	34.9
WP_052355156.1\|607486_608545_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_043248848.1\|608722_609970_+	ABC transporter permease	NA	NA	NA	NA
WP_043248850.1\|609983_610811_+	ABC transporter permease	NA	NA	NA	NA
WP_043248851.1\|610965_611640_+	ribulose-phosphate 3-epimerase	NA	NA	NA	NA
WP_043248852.1\|611639_612464_+	phosphoglycolate phosphatase	NA	NA	NA	NA
WP_043248853.1\|612535_614029_+	anthranilate synthase component I	NA	NA	NA	NA
WP_043248854.1\|614141_614465_-	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_043248855.1\|614597_615368_-	helix-turn-helix transcriptional regulator	A0A1B0Z078	Pseudomonas_phage	1.1e-73	59.7
WP_043248857.1\|615769_615979_+	conjugal transfer protein TraR	Q9ZXI6	Pseudomonas_virus	2.8e-08	44.8
WP_043248858.1\|615997_616357_+	hypothetical protein	NA	NA	NA	NA
WP_084166561.1\|616420_616915_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_043248859.1\|617199_617547_+\|holin	holin	B5TK61	Pseudomonas_phage	3.6e-24	50.9
WP_043248861.1\|617579_618110_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.8e-27	38.6
WP_043248863.1\|618106_618670_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	4.9e-47	66.7
WP_043248865.1\|618773_619100_+\|plate	phage baseplate protein	A0A2H4JA09	uncultured_Caudovirales_phage	4.4e-32	62.6
WP_043248868.1\|619096_619987_+\|plate	baseplate assembly protein	A0A0M4REB7	Salmonella_phage	8.3e-89	61.2
WP_043248870.1\|619979_620594_+\|tail	phage tail protein I	A0A218M4J3	Erwinia_phage	2.3e-61	57.8
WP_043248873.1\|621935_623093_+\|tail	phage tail sheath family protein	Q38068	Phage_PS17	1.4e-176	79.0
WP_043248875.1\|623105_623609_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	5.4e-61	69.8
WP_043248877.1\|623619_623931_+\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	1.0e-17	53.8
WP_043248879.1\|624089_626057_+	hypothetical protein	NA	NA	NA	NA
WP_043248881.1\|626122_626971_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	1.4e-53	43.3
WP_043248883.1\|626954_627164_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	1.8e-15	63.2
WP_043248886.1\|627210_628239_+	phage late control D family protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.8e-95	53.6
WP_043248888.1\|628252_628891_+	glycoside hydrolase family 19 protein	J7I4M6	Pseudomonas_phage	1.6e-65	62.2
WP_043248890.1\|629001_629574_+	hypothetical protein	A0A0U4B0K9	Pseudomonas_phage	1.7e-55	54.2
WP_156957980.1\|629581_630115_+	hypothetical protein	X5I3B3	Pseudomonas_phage	1.7e-33	59.5
WP_043248892.1\|630118_630634_+	hypothetical protein	A0A0S3UFP9	Pseudomonas_phage	1.7e-57	70.4
WP_043248894.1\|630638_632105_+\|tail	tail fiber domain-containing protein	A0A291NX30	Escherichia_phage	8.7e-11	25.1
WP_052355158.1\|632171_632696_+	hypothetical protein	A0A0E3M0Y2	Rhodoferax_phage	5.8e-42	53.8
WP_043248897.1\|633177_633774_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	6.1e-72	62.6
WP_043248899.1\|633770_634820_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	8.5e-109	56.6
WP_043248901.1\|634816_635653_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.3e-69	54.6
WP_043248904.1\|636802_637891_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_043248906.1\|637894_639352_-	peptidoglycan DD-metalloendopeptidase family protein	O03937	Lactobacillus_phage	7.3e-18	45.0

DBSCAN-SWA_2

773629 : 807534

Pseudomonas_phage(89.74%)

transposase,head,integrase

attL 766167:766183|attR 816447:816463

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
766167:766183	attL	NA	NA	NA	NA
WP_043249116.1\|773629_773998_-	hypothetical protein	A0A0S4L0M4	Pseudomonas_phage	1.9e-39	66.1
WP_043249117.1\|773994_774576_-	regulatory protein GemA	Q5ZR14	Pseudomonas_phage	6.6e-71	72.2
WP_043249118.1\|774575_774788_-	hypothetical protein	NA	NA	NA	NA
WP_167333386.1\|774771_775434_-	HNH endonuclease	A0A2H4JEM6	uncultured_Caudovirales_phage	2.1e-20	32.8
WP_043249121.1\|775492_775894_-	hypothetical protein	J9SNQ5	Pseudomonas_phage	3.6e-44	67.7
WP_084166769.1\|775895_776480_-	DUF3164 family protein	A0A0M3LQ92	Mannheimia_phage	5.0e-42	43.5
WP_043256875.1\|776523_776877_-	hypothetical protein	A0A0S4L050	Pseudomonas_phage	2.5e-28	58.6
WP_052355163.1\|777002_777290_-	hypothetical protein	J9SGZ7	Pseudomonas_phage	4.2e-10	47.4
WP_043249123.1\|777286_777613_-	hypothetical protein	J9RWC3	Pseudomonas_phage	4.6e-21	54.4
WP_043249126.1\|777614_778808_-	AAA family ATPase	Q5ZR05	Pseudomonas_phage	1.5e-138	64.9
WP_043249127.1\|778807_780574_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	A0A0S4L2U5	Pseudomonas_phage	2.1e-197	62.3
WP_043249129.1\|780577_781504_-	hypothetical protein	A0A0S4L093	Pseudomonas_phage	6.4e-76	53.2
WP_043249131.1\|781555_781855_-	helix-turn-helix domain-containing protein	A0A0S4L7B4	Pseudomonas_phage	3.1e-32	78.1
WP_043249133.1\|781851_782076_-	hypothetical protein	NA	NA	NA	NA
WP_043249135.1\|782072_782555_-	hypothetical protein	A0A0S4L5L2	Pseudomonas_phage	2.4e-58	68.8
WP_043249137.1\|782672_782930_+	hypothetical protein	NA	NA	NA	NA
WP_043249139.1\|782940_783165_-	hypothetical protein	Q5ZR00	Pseudomonas_phage	1.3e-11	49.4
WP_043249140.1\|783176_783413_-	hypothetical protein	NA	NA	NA	NA
WP_043249142.1\|783439_783844_-	hypothetical protein	NA	NA	NA	NA
WP_052355164.1\|783939_784365_+	helix-turn-helix domain-containing protein	E5E3P4	Burkholderia_phage	1.6e-13	54.3
WP_043249144.1\|784386_785124_+	hypothetical protein	NA	NA	NA	NA
WP_043249146.1\|785166_785664_+	hypothetical protein	J9RWD8	Pseudomonas_phage	5.3e-61	77.5
WP_043249148.1\|785660_786089_+	hypothetical protein	NA	NA	NA	NA
WP_043256880.1\|786371_786629_+	membrane protein	Q5ZQZ2	Pseudomonas_phage	1.9e-30	80.0
WP_043256882.1\|786712_787318_+	lytic transglycosylase domain-containing protein	J9SHG5	Pseudomonas_phage	2.4e-95	85.9
WP_043249150.1\|787347_787551_+	hypothetical protein	NA	NA	NA	NA
WP_043249152.1\|787547_787751_+	hypothetical protein	J9RWE5	Pseudomonas_phage	1.7e-10	72.3
WP_043249154.1\|787737_788343_+	hypothetical protein	A0A0S4L1H0	Pseudomonas_phage	4.8e-56	61.1
WP_043249157.1\|788346_788736_+	hypothetical protein	Q5ZQY8	Pseudomonas_phage	5.6e-58	89.9
WP_043249159.1\|788725_789034_+	hypothetical protein	A0A0S4L0A3	Pseudomonas_phage	2.9e-49	90.2
WP_043249160.1\|789039_789612_+	DUF3486 family protein	Q5ZQY6	Pseudomonas_phage	9.4e-86	92.1
WP_043249161.1\|789611_791066_+	hypothetical protein	Q5ZQY5	Pseudomonas_phage	1.4e-247	86.4
WP_043249164.1\|791065_792538_+	DUF935 family protein	J9RWN4	Pseudomonas_phage	1.6e-259	89.6
WP_043249167.1\|792537_793788_+\|head	phage head morphogenesis protein	A0A0S4L0Q0	Pseudomonas_phage	1.5e-200	82.9
WP_043249170.1\|793784_794357_+	phage virion morphogenesis protein	J9SN67	Pseudomonas_phage	3.7e-82	77.4
WP_084166566.1\|794641_795808_+	peptidase	A0A0S4L0J5	Pseudomonas_phage	9.1e-128	74.7
WP_043249175.1\|795811_796192_+	DUF2190 family protein	A0A0S4L3C3	Pseudomonas_phage	2.2e-46	79.2
WP_043249177.1\|796203_797136_+	hypothetical protein	J9SVQ2	Pseudomonas_phage	7.7e-154	84.8
WP_052355412.1\|797657_797852_+	hypothetical protein	NA	NA	NA	NA
WP_043249181.1\|797851_798205_+	hypothetical protein	A2I2Y8	Vibrio_virus	2.3e-42	73.5
WP_043249182.1\|798215_798722_+	DUF1320 domain-containing protein	J9SN75	Pseudomonas_phage	4.6e-68	75.1
WP_043249183.1\|798723_799179_+	hypothetical protein	A0A0S4L2X9	Pseudomonas_phage	1.6e-64	76.2
WP_043249184.1\|799175_799388_+	hypothetical protein	NA	NA	NA	NA
WP_043249185.1\|799391_800150_+	hypothetical protein	Q5ZQX2	Pseudomonas_phage	2.2e-106	77.0
WP_043249186.1\|800152_800665_+	hypothetical protein	A0A0S4L2X3	Pseudomonas_phage	2.2e-54	64.7
WP_167333355.1\|800661_800805_+	hypothetical protein	J9SN84	Pseudomonas_phage	7.6e-05	58.7
WP_052355165.1\|800892_805089_+	hypothetical protein	J9SGV2	Pseudomonas_phage	2.7e-81	34.3
WP_052355166.1\|805085_806285_+	hypothetical protein	J9STL4	Pseudomonas_phage	1.8e-83	41.5
WP_043249187.1\|806274_807093_+	DUF2163 domain-containing protein	NA	NA	NA	NA
WP_043249188.1\|807103_807325_+	hypothetical protein	NA	NA	NA	NA
WP_043249189.1\|807321_807534_+	hypothetical protein	A0A0S4L3D9	Pseudomonas_phage	3.5e-14	55.4
816447:816463	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1176175 : 1211880

Catovirus(20.0%)

holin,protease,tRNA,transposase,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043249741.1\|1176175_1176658_+\|protease	serine protease inhibitor ecotin	NA	NA	NA	NA
WP_043249743.1\|1176819_1177425_+	DUF2238 domain-containing protein	NA	NA	NA	NA
WP_043249745.1\|1177852_1178425_-	DUF1003 domain-containing protein	NA	NA	NA	NA
WP_084166774.1\|1178659_1179817_+	GGDEF domain-containing protein	NA	NA	NA	NA
WP_052355188.1\|1180174_1181611_+	hypothetical protein	NA	NA	NA	NA
WP_043256973.1\|1181612_1181894_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_084166576.1\|1182225_1182498_+\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_043249750.1\|1182522_1183023_+	DUF3916 domain-containing protein	NA	NA	NA	NA
WP_052355189.1\|1183231_1183717_-	hypothetical protein	A0A0K1LTX3	Mycobacterium_phage	4.6e-09	33.1
WP_156957991.1\|1183921_1184722_-	hypothetical protein	NA	NA	NA	NA
WP_043249752.1\|1184915_1185821_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_043249755.1\|1185931_1187590_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	5.4e-41	25.9
WP_043249758.1\|1187705_1189325_+	MHS family MFS transporter	NA	NA	NA	NA
WP_043248478.1\|1189401_1190352_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_052355190.1\|1190828_1192280_-	hypothetical protein	NA	NA	NA	NA
WP_043249762.1\|1192392_1194756_-	DNA polymerase II	A0A0P0YM26	Yellowstone_lake_phycodnavirus	5.5e-31	26.1
WP_043249765.1\|1194965_1196588_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	5.6e-35	33.3
WP_043249768.1\|1196775_1197717_+	methyltransferase	NA	NA	NA	NA
WP_043249770.1\|1197812_1198556_+	YkgJ family cysteine cluster protein	NA	NA	NA	NA
WP_043249772.1\|1198607_1198970_-	EF-hand domain-containing protein	NA	NA	NA	NA
WP_043249774.1\|1199217_1200837_+	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.5e-11	33.2
WP_052355191.1\|1200811_1201327_+	purine-binding chemotaxis protein CheW	NA	NA	NA	NA
WP_043249778.1\|1201323_1202565_+	hypothetical protein	NA	NA	NA	NA
WP_043249780.1\|1202557_1203232_+	chemotaxis protein CheW	NA	NA	NA	NA
WP_043249782.1\|1203228_1205517_+	hybrid sensor histidine kinase/response regulator	Q56AR1	Bacillus_thuringiensis_phage	2.8e-08	28.4
WP_043249784.1\|1205784_1206792_+	chemotaxis response regulator protein-glutamate methylesterase	Q6XM27	Feldmannia_irregularis_virus	2.9e-05	26.5
WP_156958115.1\|1206869_1207835_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.8e-17	36.9
WP_156957993.1\|1207928_1209023_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	3.3e-07	44.8
WP_043249791.1\|1209141_1210662_+\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.3e-86	38.7
WP_043249792.1\|1210863_1211880_+\|transposase	IS110 family transposase	NA	NA	NA	NA

DBSCAN-SWA_4

1287284 : 1346683

Pseudomonas_phage(27.59%)

holin,protease,terminase,capsid,integrase,tRNA,portal

attL 1287702:1287718|attR 1336874:1336890

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043249913.1\|1287284_1288637_+\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
1287702:1287718	attL	NA	NA	NA	NA
WP_043249915.1\|1288709_1291097_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_043249918.1\|1291145_1291649_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_043249920.1\|1291648_1292710_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_043249923.1\|1292758_1293199_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_043249925.1\|1293195_1293972_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_043249926.1\|1293974_1295117_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_043249927.1\|1295116_1295728_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.5e-28	39.4
WP_043249929.1\|1295824_1299355_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	4.3e-197	37.5
WP_043249930.1\|1299470_1300421_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_043249931.1\|1300559_1301873_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_043249932.1\|1302042_1303671_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	8.1e-159	53.6
WP_043249933.1\|1303673_1304519_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.6e-49	41.5
WP_043249934.1\|1304567_1305857_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	4.8e-138	61.6
WP_043256990.1\|1305923_1306211_+	cell division protein FtsB	NA	NA	NA	NA
WP_043249935.1\|1306207_1306921_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_043249936.1\|1306929_1307511_+	hypothetical protein	NA	NA	NA	NA
WP_043249937.1\|1307522_1308413_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_043249938.1\|1308600_1309713_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	3.0e-35	29.3
WP_043249939.1\|1309765_1310623_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_043249940.1\|1310682_1311156_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_043249941.1\|1311152_1312211_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_043249942.1\|1312198_1312957_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	7.8e-64	49.8
WP_156958117.1\|1312979_1313615_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	7.1e-42	53.5
WP_084166779.1\|1313680_1314553_+	peptidoglycan DD-metalloendopeptidase family protein	A0A292GJG6	Xanthomonas_phage	2.9e-14	46.9
WP_043249944.1\|1314647_1315652_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	9.2e-36	37.6
WP_043249946.1\|1316074_1316398_-	ferredoxin family protein	NA	NA	NA	NA
WP_084166583.1\|1316464_1319032_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.8e-28	23.5
WP_043249949.1\|1319327_1319807_+	hypothetical protein	NA	NA	NA	NA
WP_043256993.1\|1319803_1320793_-\|integrase	tyrosine-type recombinase/integrase	A0A2H4J8E5	uncultured_Caudovirales_phage	3.1e-113	63.8
WP_084166584.1\|1320792_1320996_-	DUF4224 domain-containing protein	A0A2H4JC20	uncultured_Caudovirales_phage	9.5e-09	47.6
WP_043249950.1\|1321185_1321506_-	hypothetical protein	NA	NA	NA	NA
WP_156957996.1\|1321577_1322195_+	hypothetical protein	NA	NA	NA	NA
WP_043249953.1\|1322548_1323091_-	phosphohydrolase	A0A2D1GNL9	Pseudomonas_phage	1.4e-27	43.2
WP_043249955.1\|1323087_1323762_-	hypothetical protein	NA	NA	NA	NA
WP_043249957.1\|1323828_1324146_-	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_052355194.1\|1324142_1324595_-	hypothetical protein	NA	NA	NA	NA
WP_043249960.1\|1324598_1324802_-	hypothetical protein	NA	NA	NA	NA
WP_043249961.1\|1324791_1325085_-	DNA-binding protein	NA	NA	NA	NA
WP_043249963.1\|1325093_1325684_-	hypothetical protein	NA	NA	NA	NA
WP_043256998.1\|1325938_1326652_-	LexA family transcriptional regulator	F1C599	Cronobacter_phage	2.4e-22	34.5
WP_043249966.1\|1326759_1327035_+	phage regulatory protein	A0A2H4JA29	uncultured_Caudovirales_phage	3.2e-07	45.5
WP_043249969.1\|1327330_1327840_+	hypothetical protein	NA	NA	NA	NA
WP_043249972.1\|1327832_1328042_+	hypothetical protein	NA	NA	NA	NA
WP_043257000.1\|1328062_1330285_+	toprim domain-containing protein	A0A2D1GN57	Marinobacter_phage	1.5e-184	46.5
WP_043249974.1\|1330281_1330656_+	hypothetical protein	NA	NA	NA	NA
WP_043249976.1\|1331267_1331606_+\|holin	holin	B5TK61	Pseudomonas_phage	9.9e-27	55.6
WP_043249979.1\|1331580_1331967_+	HNH endonuclease	F1C587	Cronobacter_phage	1.7e-30	57.7
WP_043249980.1\|1332138_1332663_+\|terminase	P27 family phage terminase small subunit	NA	NA	NA	NA
WP_043249982.1\|1332625_1334452_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	1.2e-102	37.9
WP_043249984.1\|1334448_1334628_+	hypothetical protein	NA	NA	NA	NA
WP_043249986.1\|1334630_1335905_+\|portal	phage portal protein	Q8W6U7	Burkholderia_virus	2.7e-141	58.8
WP_043249988.1\|1335901_1336855_+	S49 family peptidase	A4JX00	Burkholderia_virus	1.5e-99	58.8
WP_043249991.1\|1336916_1338239_+\|capsid	phage major capsid protein	A4JX01	Burkholderia_virus	1.8e-127	55.8
1336874:1336890	attR	NA	NA	NA	NA
WP_043249994.1\|1338296_1338638_+	hypothetical protein	NA	NA	NA	NA
WP_043249997.1\|1338640_1339192_+	hypothetical protein	NA	NA	NA	NA
WP_043250000.1\|1339193_1339745_+	hypothetical protein	NA	NA	NA	NA
WP_052355195.1\|1339759_1340356_+	hypothetical protein	A0A0U4J906	Pseudomonas_phage	2.1e-32	47.0
WP_043250005.1\|1340414_1340849_+	hypothetical protein	NA	NA	NA	NA
WP_043250007.1\|1340877_1341666_+	hypothetical protein	A0A0U4ISK2	Pseudomonas_phage	4.2e-84	61.2
WP_043250009.1\|1341662_1342028_+	hypothetical protein	A0A0U4KLC4	Pseudomonas_phage	9.4e-15	40.7
WP_156957997.1\|1342054_1342204_+	hypothetical protein	NA	NA	NA	NA
WP_043250013.1\|1342203_1344399_+	tape measure protein	A0A0U3TH20	Pseudomonas_phage	1.2e-157	47.6
WP_043250015.1\|1344434_1344947_+	hypothetical protein	A0A0U4IIK1	Pseudomonas_phage	1.5e-29	42.3
WP_156957998.1\|1345063_1346683_+	hypothetical protein	A0A1W6JTA3	Pseudomonas_phage	5.0e-124	45.6

DBSCAN-SWA_5

1349813 : 1353511

Pseudomonas_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043250021.1\|1349813_1350227_+	cell wall hydrolase	A0A2D1GNI1	Pseudomonas_phage	1.2e-47	65.0
WP_043250023.1\|1350236_1350611_+	hypothetical protein	J7HXL1	Pseudomonas_phage	2.7e-33	66.1
WP_043250025.1\|1350607_1350868_+	hypothetical protein	A0A0S2SYC6	Pseudomonas_phage	2.4e-25	72.0
WP_052355198.1\|1351209_1351713_-	hypothetical protein	L7THB5	Pseudomonas_virus	3.4e-47	58.3
WP_043250029.1\|1351684_1352062_-	helix-turn-helix domain-containing protein	L7TKV7	Pseudomonas_virus	2.1e-46	76.6
WP_052355199.1\|1352952_1353384_+	translesion error-prone DNA polymerase V autoproteolytic subunit	A0A2H4J538	uncultured_Caudovirales_phage	4.2e-22	47.5
WP_043250031.1\|1353376_1353511_+	DNA-directed DNA polymerase	A0A218MNF2	uncultured_virus	2.1e-09	84.4

DBSCAN-SWA_6

2739139 : 2772863

Pseudomonas_phage(50.0%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043252300.1\|2739139_2739580_-\|tail	phage tail protein	NA	NA	NA	NA
WP_043252302.1\|2739587_2740019_-\|tail	phage tail protein	A0A059XEM3	uncultured_phage	6.1e-29	51.6
WP_043252305.1\|2740037_2741504_-\|tail	phage tail sheath family protein	I1TQ62	Pseudomonas_phage	1.6e-09	33.1
WP_052355271.1\|2741636_2742197_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_160287075.1\|2743636_2743939_-\|transposase	transposase	A0A1B0Z042	Pseudomonas_phage	2.8e-41	82.8
WP_084166632.1\|2743954_2744362_-\|transposase	IS3 family transposase	A0A1B0Z042	Pseudomonas_phage	1.2e-55	73.1
WP_052355272.1\|2744435_2745038_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_043252306.1\|2745088_2745976_+	threonine/homoserine exporter RhtA	NA	NA	NA	NA
WP_043252308.1\|2745977_2746877_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_043252311.1\|2747327_2748092_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_043252313.1\|2748181_2748985_-	2,5-didehydrogluconate reductase DkgB	A0A2H4PQR8	Staphylococcus_phage	1.2e-38	38.1
WP_043252314.1\|2749007_2750198_-	MFS transporter	NA	NA	NA	NA
WP_043252315.1\|2750621_2752088_-	sodium:solute symporter family protein	NA	NA	NA	NA
WP_043252316.1\|2752505_2753393_+	Dyp-type peroxidase	NA	NA	NA	NA
WP_156958030.1\|2753427_2753592_-	hypothetical protein	NA	NA	NA	NA
WP_052355273.1\|2754018_2754447_+	DUF4440 domain-containing protein	NA	NA	NA	NA
WP_043257281.1\|2754458_2755973_+	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA
WP_043252317.1\|2755969_2757412_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_043252318.1\|2757589_2758009_+	cupin domain-containing protein	NA	NA	NA	NA
WP_043252319.1\|2758337_2759285_-	hypothetical protein	NA	NA	NA	NA
WP_043252320.1\|2759464_2759989_-	cytochrome c552	NA	NA	NA	NA
WP_043252323.1\|2759996_2760518_-	methylamine dehydrogenase	NA	NA	NA	NA
WP_043252325.1\|2760536_2761154_-	methylamine dehydrogenase accessory protein MauD	NA	NA	NA	NA
WP_043257282.1\|2761157_2761697_-	methylamine utilization protein MauE	NA	NA	NA	NA
WP_043252328.1\|2761709_2762858_-	amine dehydrogenase	NA	NA	NA	NA
WP_043252330.1\|2763046_2764537_-	PAS domain S-box protein	NA	NA	NA	NA
WP_043252333.1\|2764772_2765927_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_043252335.1\|2765948_2766320_+	hypothetical protein	NA	NA	NA	NA
WP_043252337.1\|2766323_2766830_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_043252338.1\|2766826_2767972_+	amidase	NA	NA	NA	NA
WP_043252340.1\|2767982_2769266_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_043252341.1\|2769262_2769757_+	aromatic-ring-hydroxylating dioxygenase	NA	NA	NA	NA
WP_043252343.1\|2769767_2770508_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_043252346.1\|2770644_2771595_+	oxidoreductase	NA	NA	NA	NA
WP_156958130.1\|2771716_2772863_+\|transposase	IS3 family transposase	Q716C2	Shigella_phage	1.6e-81	55.1

DBSCAN-SWA_7

2847824 : 2919356

Hokovirus(33.33%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043249792.1\|2847824_2848841_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_043252462.1\|2849001_2849583_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_043257293.1\|2849756_2850971_+	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA
WP_043257294.1\|2851761_2852889_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_052355277.1\|2852885_2853581_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_043252463.1\|2853577_2855494_-	hypothetical protein	NA	NA	NA	NA
WP_043252465.1\|2855487_2856798_-	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_043252466.1\|2856794_2857781_-	polysaccharide deacetylase family protein	NA	NA	NA	NA
WP_043252467.1\|2857788_2858928_-	glycosyltransferase	NA	NA	NA	NA
WP_043252469.1\|2859874_2861248_-	O-antigen ligase family protein	NA	NA	NA	NA
WP_084166798.1\|2861244_2862243_-	glycosyltransferase family 4 protein	NA	NA	NA	NA
WP_043252472.1\|2862307_2863900_-	LPS biosynthesis protein	NA	NA	NA	NA
WP_043252474.1\|2863913_2864945_-	polysaccharide biosynthesis protein	NA	NA	NA	NA
WP_043252475.1\|2864958_2865606_-	tyrosine-protein kinase family protein	NA	NA	NA	NA
WP_156958032.1\|2865607_2866369_-	sugar transferase	NA	NA	NA	NA
WP_052355278.1\|2867274_2867937_+	hypothetical protein	NA	NA	NA	NA
WP_043252478.1\|2868226_2869354_-\|transposase	IS481 family transposase	NA	NA	NA	NA
WP_043252480.1\|2871977_2874626_-	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
WP_052355279.1\|2874835_2875525_-	hypothetical protein	NA	NA	NA	NA
WP_043257301.1\|2875671_2877504_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	C7U047	Ostreococcus_tauri_virus	9.6e-100	44.2
WP_043252481.1\|2877673_2878366_+	phosphoribosyltransferase	NA	NA	NA	NA
WP_043252483.1\|2878362_2879013_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_043252485.1\|2878997_2879555_-	phosphoribosyltransferase	NA	NA	NA	NA
WP_043252488.1\|2879830_2880298_+	YbaK/EbsC family protein	NA	NA	NA	NA
WP_043252490.1\|2880595_2882893_+	pyrroloquinoline quinone biosynthesis protein PqqF	A0A1V0SJA4	Klosneuvirus	3.7e-16	20.2
WP_043252491.1\|2883183_2884374_+	porin	NA	NA	NA	NA
WP_043252493.1\|2884573_2885737_+	GfdT protein	NA	NA	NA	NA
WP_084166635.1\|2885666_2888303_+	PAS domain-containing hybrid sensor histidine kinase/response regulator	A0A2K9L5I4	Tupanvirus	2.2e-12	26.8
WP_043252496.1\|2888522_2889383_-	DMT family transporter	NA	NA	NA	NA
WP_043252498.1\|2889392_2890058_-	response regulator transcription factor	NA	NA	NA	NA
WP_043252499.1\|2890103_2890655_-	PQQ-dependent catabolism-associated CXXCW motif protein	NA	NA	NA	NA
WP_043252501.1\|2890759_2891575_-	ABC transporter permease	NA	NA	NA	NA
WP_043252503.1\|2891571_2892303_-	ATP-binding cassette domain-containing protein	A0A1M7XV31	Cedratvirus	1.2e-13	29.9
WP_156958133.1\|2892299_2893259_-	PQQ-dependent catabolism-associated beta-propeller protein	NA	NA	NA	NA
WP_043252505.1\|2893304_2894510_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_167333367.1\|2894670_2894811_+	hypothetical protein	NA	NA	NA	NA
WP_043252507.1\|2895032_2895470_+	cytochrome c-550 PedF	NA	NA	NA	NA
WP_043252509.1\|2895477_2896371_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_043252510.1\|2896387_2897134_+	quinoprotein dehydrogenase-associated SoxYZ-like carrier	NA	NA	NA	NA
WP_043252512.1\|2897161_2898091_+	quinoprotein relay system zinc metallohydrolase 1	A0A1V0SGC6	Hokovirus	4.5e-05	37.1
WP_043252514.1\|2898392_2900171_+	PQQ-dependent dehydrogenase, methanol/ethanol family	NA	NA	NA	NA
WP_003106462.1\|2902250_2902322_+	pyrroloquinoline quinone precursor peptide PqqA	NA	NA	NA	NA
WP_043252516.1\|2902370_2903285_+	pyrroloquinoline quinone biosynthesis protein PqqB	NA	NA	NA	NA
WP_043252518.1\|2903297_2904047_+	pyrroloquinoline-quinone synthase PqqC	NA	NA	NA	NA
WP_043252520.1\|2904046_2904325_+	pyrroloquinoline quinone biosynthesis peptide chaperone PqqD	NA	NA	NA	NA
WP_043252522.1\|2904296_2905442_+	pyrroloquinoline quinone biosynthesis protein PqqE	NA	NA	NA	NA
WP_043252523.1\|2905443_2907276_+	S9 family peptidase	NA	NA	NA	NA
WP_043252525.1\|2907359_2908523_+	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_043252527.1\|2908506_2910198_+	response regulator	A0A1V0SGX0	Hokovirus	1.6e-19	25.8
WP_043252528.1\|2910359_2910869_+	DUF3015 domain-containing protein	NA	NA	NA	NA
WP_156958033.1\|2910947_2911217_+	hypothetical protein	NA	NA	NA	NA
WP_043252530.1\|2911820_2912321_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_043252532.1\|2912344_2913883_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_084166636.1\|2913903_2915100_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_084166637.1\|2914993_2915542_+	hypothetical protein	NA	NA	NA	NA
WP_043252535.1\|2915568_2917338_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_043252536.1\|2917301_2918393_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_043252537.1\|2918373_2918913_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_043252538.1\|2918918_2919356_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA

DBSCAN-SWA_8

3540858 : 3548275

uncultured_Caudovirales_phage(85.71%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043253214.1\|3540858_3541524_+	Bax inhibitor-1/YccA family protein	A0A2H4JFM9	uncultured_Caudovirales_phage	1.5e-82	78.9
WP_043253215.1\|3541639_3542032_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	2.7e-52	77.5
WP_043253216.1\|3542031_3542391_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	4.4e-33	60.8
WP_043253217.1\|3542390_3542690_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	9.1e-24	62.7
WP_043253218.1\|3542686_3543022_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	3.8e-39	71.2
WP_043253219.1\|3543018_3544017_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	4.0e-140	74.3
WP_043253220.1\|3544105_3545107_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_043257445.1\|3545260_3545593_-	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_043253221.1\|3545607_3546993_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_043253222.1\|3546994_3548275_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	8.2e-98	45.0

DBSCAN-SWA_9

4441954 : 4451656

Micromonas_sp._RCC1109_virus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043254137.1\|4441954_4443715_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	1.2e-131	49.5
WP_043254138.1\|4443917_4444544_+	bifunctional nicotinamidase/pyrazinamidase	A0A2K9L6K4	Tupanvirus	1.6e-22	38.8
WP_043254140.1\|4444553_4445912_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	2.6e-70	37.6
WP_043254142.1\|4446048_4447161_+	CapA family protein	S4VS02	Pandoravirus	4.5e-100	51.9
WP_043254145.1\|4447173_4448793_-	chaperonin GroEL	A0A240F779	uncultured_virus	1.6e-143	49.7
WP_043257582.1\|4448903_4449452_-	hypothetical protein	NA	NA	NA	NA
WP_043254148.1\|4449702_4450737_-	4-hydroxy-2-oxovalerate aldolase	E5EQ69	Micromonas_sp._RCC1109_virus	2.1e-43	33.7
WP_043254150.1\|4450747_4451656_-	acetaldehyde dehydrogenase (acetylating)	E5EQ71	Micromonas_sp._RCC1109_virus	9.2e-35	36.5

DBSCAN-SWA_10

4724097 : 4732092

uncultured_Caudovirales_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043254527.1\|4724097_4725306_-	nicotinate phosphoribosyltransferase	A0A2L0UZQ6	Agrobacterium_phage	6.9e-46	32.8
WP_084166701.1\|4725395_4725626_-	hypothetical protein	NA	NA	NA	NA
WP_043254528.1\|4725622_4726327_-	InaA protein	NA	NA	NA	NA
WP_043254530.1\|4726329_4727001_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_043254532.1\|4727082_4728360_-	HAMP domain-containing histidine kinase	A0A2K9L5I4	Tupanvirus	7.1e-09	26.4
WP_043254537.1\|4728349_4729033_-	response regulator transcription factor	W8CYM9	Bacillus_phage	5.6e-29	33.6
WP_043254540.1\|4729160_4729484_-	DUF190 domain-containing protein	A0A2H4J2R0	uncultured_Caudovirales_phage	8.9e-25	46.2
WP_043254542.1\|4729500_4729884_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	3.5e-36	69.9
WP_043254544.1\|4730106_4731747_-	chaperonin GroEL	A0A2I7SAK5	Vibrio_phage	5.6e-176	65.3
WP_043254546.1\|4731798_4732092_-	co-chaperone GroES	A0A221S322	uncultured_virus	1.6e-12	38.9

DBSCAN-SWA_11

5277626 : 5305077

Pseudomonas_phage(87.5%)

tail,portal,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043255377.1\|5277626_5277887_-	hypothetical protein	A0A125RNP3	Pseudomonas_phage	2.0e-27	80.5
WP_043255379.1\|5277883_5278258_-	hypothetical protein	J7HXL1	Pseudomonas_phage	5.6e-31	63.6
WP_043255381.1\|5278267_5278681_-	cell wall hydrolase	A0A2D1GNI1	Pseudomonas_phage	1.6e-47	64.2
WP_043255383.1\|5278746_5279805_-\|tail	tail fiber domain-containing protein	A0A0B5A596	Achromobacter_phage	2.0e-09	29.6
WP_043255385.1\|5280010_5280526_-	hypothetical protein	A0A0S3UFP9	Pseudomonas_phage	1.5e-58	72.8
WP_052355373.1\|5280529_5281063_-	hypothetical protein	X5I3B3	Pseudomonas_phage	6.1e-31	59.6
WP_043255387.1\|5281070_5281643_-	hypothetical protein	A0A1B0Z051	Pseudomonas_phage	4.7e-53	56.3
WP_043255389.1\|5281686_5282388_-	hypothetical protein	NA	NA	NA	NA
WP_043255391.1\|5282397_5284230_-	hypothetical protein	NA	NA	NA	NA
WP_052355374.1\|5284229_5284556_-	hypothetical protein	NA	NA	NA	NA
WP_052355375.1\|5284558_5286292_-	hypothetical protein	A0A1W6JTA3	Pseudomonas_phage	2.2e-125	42.6
WP_052355465.1\|5286292_5286790_-	hypothetical protein	A0A0A0YR40	Pseudomonas_phage	2.2e-35	46.5
WP_052355376.1\|5286846_5289441_-	tape measure protein	A0A1B0YZV6	Pseudomonas_phage	2.9e-174	47.6
WP_043255394.1\|5289543_5289855_-	hypothetical protein	A0A1B0YZV7	Pseudomonas_phage	2.7e-15	44.7
WP_043255398.1\|5290250_5291003_-	hypothetical protein	A0A1W6JT83	Pseudomonas_phage	1.8e-97	73.4
WP_043255400.1\|5291041_5291506_-	hypothetical protein	A0A1W6JT75	Pseudomonas_phage	2.6e-38	51.0
WP_156958152.1\|5291502_5291754_-	hypothetical protein	A0A1W6JT71	Pseudomonas_phage	1.2e-16	52.8
WP_043255402.1\|5291820_5292174_-	DUF2190 family protein	NA	NA	NA	NA
WP_043257731.1\|5292244_5294233_-	hypothetical protein	A0A2I7S8L6	Vibrio_phage	7.8e-87	32.1
WP_043255403.1\|5294240_5295746_-\|portal	phage portal protein	Q75QM9	Wolbachia_phage	1.7e-73	36.8
WP_043255404.1\|5295747_5295951_-	hypothetical protein	NA	NA	NA	NA
WP_043255406.1\|5295950_5297897_-\|terminase	phage terminase large subunit family protein	A0A1B0Z2K0	Pseudomonas_phage	1.7e-224	58.7
WP_043255407.1\|5297868_5298402_-	DNA packaging protein	A0A1B0Z033	Pseudomonas_phage	1.5e-24	50.4
WP_043255409.1\|5298558_5299311_-	hypothetical protein	A0A1B0Z000	Pseudomonas_phage	6.1e-93	69.1
WP_043257734.1\|5299307_5299679_-	hypothetical protein	W6MYB2	Pseudomonas_phage	8.6e-24	54.2
WP_156958071.1\|5299862_5300345_+	hypothetical protein	NA	NA	NA	NA
WP_052355378.1\|5300402_5300948_-	hypothetical protein	NA	NA	NA	NA
WP_043255410.1\|5301123_5301330_-	hypothetical protein	NA	NA	NA	NA
WP_043255412.1\|5301516_5301882_-	hypothetical protein	NA	NA	NA	NA
WP_043255414.1\|5302005_5302563_-	hypothetical protein	A0A0A0YRV6	Pseudomonas_phage	2.8e-58	76.4
WP_084166835.1\|5302559_5302823_-	hypothetical protein	A0A1W6JTC1	Pseudomonas_phage	3.1e-12	46.6
WP_043255418.1\|5302837_5304238_-	AAA family ATPase	A0A1W6JTB3	Pseudomonas_phage	2.8e-184	70.9
WP_043255420.1\|5304234_5305077_-	ATP-binding protein	A0A1W6JTD8	Pseudomonas_phage	5.8e-76	53.4

DBSCAN-SWA_12

5309111 : 5317540

Pseudomonas_phage(62.5%)

integrase

attL 5312845:5312858|attR 5323446:5323459

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_084166724.1\|5309111_5309333_-	transcriptional regulator	A0A2D1GND2	Pseudomonas_phage	1.5e-20	66.2
WP_156958073.1\|5309867_5310689_+	hypothetical protein	NA	NA	NA	NA
WP_156958074.1\|5310685_5311531_+	hypothetical protein	NA	NA	NA	NA
WP_043255433.1\|5311715_5312231_+	hypothetical protein	G8C7W4	Escherichia_phage	7.3e-29	43.6
WP_043255435.1\|5312309_5312510_+	carbon storage regulator CsrA	J7I430	Pseudomonas_phage	1.6e-13	72.5
WP_043255437.1\|5312512_5313595_+	hypothetical protein	A0A1W6JT97	Pseudomonas_phage	7.9e-09	32.9
5312845:5312858	attL	NA	NA	NA	NA
WP_043255439.1\|5313591_5313816_+	hypothetical protein	NA	NA	NA	NA
WP_043255442.1\|5313812_5314031_+	hypothetical protein	NA	NA	NA	NA
WP_084166726.1\|5314014_5314701_+	hypothetical protein	A0A1W6JTE0	Pseudomonas_phage	1.7e-33	38.9
WP_052355383.1\|5314697_5315414_+	HNH endonuclease	M1PKJ5	Streptococcus_phage	3.2e-06	30.9
WP_043255443.1\|5315376_5315619_+	hypothetical protein	NA	NA	NA	NA
WP_052355384.1\|5315851_5317030_+\|integrase	site-specific integrase	A0A1W6JTA0	Pseudomonas_phage	2.4e-208	93.0
WP_043255445.1\|5317096_5317540_+	SocA family protein	I6R0L8	Salmonella_phage	2.0e-43	54.4
5323446:5323459	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_HG322950

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection