| NZ_CP015376.1|WP_044143629.1|1449765_1450281_-|CinA-family-protein |
gnl|CDD|334938 |
pfam02464, CinA, Competence-damaged protein. CinA is the first gene in the competence-inducible (cin) operon, and is thought to be specifically required at some stage in the process of transformation. This Pfam family consists of putative competence-damaged proteins from the cin operon. Some members of this family have nicotinamide mononucleotide (NMN) deamidase activity.
|
1.25142e-48 |
| NZ_CP015376.1|WP_064103892.1|1444195_1445413_+|P44/Msp2-family-outer-membrane-protein |
gnl|CDD|366729 |
pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.
|
1.90466e-32 |
| NZ_CP015376.1|WP_187293668.1|1453166_1453289_-|P44/Msp2-family-outer-membrane-protein |
gnl|CDD|366729 |
pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.
|
2.36794e-08 |
| NZ_CP015376.1|WP_011451289.1|1452290_1452809_+|translation-initiation-factor-IF-3 |
gnl|CDD|234582 |
PRK00028, infC, translation initiation factor IF-3; Reviewed.
|
4.55332e-65 |
| NZ_CP015376.1|WP_044143570.1|1442834_1443512_+|dethiobiotin-synthase |
gnl|CDD|349763 |
cd03109, DTBS, dethiobiotin synthetase. Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms. The enzyme catalyzes formation of the ureido ring of dethiobiotin from (7R,8S)-7,8-diaminononanoic acid (DAPA) and carbon dioxide. The enzyme utilizes carbon dioxide instead of hydrogen carbonate as substrate and is dependent on ATP and divalent metal ions as cofactors.
|
2.36788e-52 |
| NZ_CP015376.1|WP_044143648.1|1438711_1438948_-|hypothetical-protein |
gnl|CDD|213552 |
TIGR00691, PppGpp_synthetase., (p)ppGpp synthetase, RelA/SpoT family. The functions of E. coli RelA and SpoT differ somewhat. RelA (EC 2.7.6.5) produces pppGpp (or ppGpp) from ATP and GTP (or GDP). SpoT (EC 3.1.7.2) degrades ppGpp, but may also act as a secondary ppGpp synthetase. The two proteins are strongly similar. In many species, a single homolog to SpoT and RelA appears reponsible for both ppGpp synthesis and ppGpp degradation. (p)ppGpp is a regulatory metabolite of the stringent response, but appears also to be involved in antibiotic biosynthesis in some species. [Cellular processes, Adaptations to atypical conditions].
|
0.00827974 |
| NZ_CP015376.1|WP_081250587.1|1454694_1455855_-|P44/Msp2-family-outer-membrane-protein |
gnl|CDD|366729 |
pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.
|
3.1144e-43 |
| NZ_CP015376.1|WP_145915531.1|1440464_1441376_-|P44/Msp2-family-outer-membrane-protein |
gnl|CDD|366729 |
pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.
|
1.88668e-44 |
| NZ_CP015376.1|WP_044143640.1|1450345_1452268_+|threonine--tRNA-ligase |
gnl|CDD|234752 |
PRK00413, thrS, threonyl-tRNA synthetase; Reviewed.
|
0 |
| NZ_CP015376.1|WP_180843623.1|1438135_1438513_+|MerR-family-transcriptional-regulator |
gnl|CDD|133393 |
cd04765, HTH_MlrA-like_sg2, Helix-Turn-Helix DNA binding domain of putative MlrA-like transcription regulators. Putative helix-turn-helix (HTH) MlrA-like transcription regulators (subgroup 2), N-terminal domain. The MlrA protein, also known as YehV, has been shown to control cell-cell aggregation by co-regulating the expression of curli and extracellular matrix production in Escherichia coli and Salmonella typhimurium. These proteins belong to the MerR superfamily of transcription regulators that promote expression of several stress regulon genes by reconfiguring the spacer between the -35 and -10 promoter elements. Their conserved N-terminal domains contain predicted HTH motifs that mediate DNA binding, while the dissimilar C-terminal domains bind specific coactivator molecules.
|
6.11748e-32 |
| NZ_CP015376.1|WP_011451304.1|1436932_1437481_-|redoxin-domain-containing-protein |
gnl|CDD|239264 |
cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
|
1.08322e-06 |
| NZ_CP015376.1|WP_044143569.1|1441843_1442761_-|signal-recognition-particle-docking-protein-FtsY |
gnl|CDD|236686 |
PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.
|
3.8762e-152 |
| NZ_CP015376.1|WP_011451292.1|1449366_1449753_+|50S-ribosomal-protein-L19 |
gnl|CDD|235418 |
PRK05338, rplS, 50S ribosomal protein L19; Provisional.
|
1.14571e-56 |
| NZ_CP015376.1|WP_064103893.1|1453551_1454634_-|P44/Msp2-family-outer-membrane-protein |
gnl|CDD|366729 |
pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.
|
1.10413e-25 |
| NZ_CP015376.1|WP_021799148.1|1437842_1438139_+|integration-host-factor-subunit-alpha |
gnl|CDD|259857 |
cd13835, IHF_A, Alpha subunit of integration host factor (IHFA). This subfamily consists of the alpha subunit of integration host factor (IHF) and IHF-like domains. IHF is a nucleoid-associated protein (NAP) that binds and sharply bends many DNA targets in a sequence specific manner. It is a heterodimeric protein composed of two highly homologous subunits IHFA (IHF-alpha) and IHFB (IHF-beta). It is known to act as a transcription factor at many gene regulatory regions in E. coli. IHF is an essential cofactor in phage lambda site-specific recombination, having an architectural role during assembly of specialized nucleoprotein structures (snups). IHF is also involved in formation as well as maintenance of bacterial biofilms since it is found in complex with extracellular DNA (eDNA) within the extracellular polymeric substances (EPS) matrix of many biofilms.
|
9.7817e-32 |
| NZ_CP015376.1|WP_052344146.1|1448152_1448668_+|16S-rRNA-processing-protein-RimM |
gnl|CDD|173056 |
PRK14592, rimM, 16S rRNA-processing protein RimM; Provisional.
|
1.64119e-90 |
| NZ_CP015376.1|WP_044143631.1|1448664_1449363_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD |
gnl|CDD|234581 |
PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.
|
1.66375e-139 |
| NZ_CP015376.1|WP_044143636.1|1446399_1447482_+|P44/Msp2-family-outer-membrane-protein |
gnl|CDD|366729 |
pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.
|
2.28933e-24 |
| NZ_CP015376.1|WP_081250584.1|1439357_1440404_-|P44/Msp2-family-outer-membrane-protein |
gnl|CDD|366729 |
pfam01617, Surface_Ag_2, Surface antigen. This family includes a number of bacterial surface antigens expressed on the surface of pathogens.
|
8.88249e-26 |
