CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	0 crisprs	csa3,DEDDh	1
NZ_CP015881	Ensifer adhaerens strain Casida A plasmid pCasidaAA, complete sequence	0 crisprs	csa3,WYL,DEDDh	2
NZ_CP015880	Ensifer adhaerens strain Casida A chromosome, complete genome	2 crisprs	csa3,DEDDh,WYL,cas3	3

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

243259 : 249141

Sinorhizobium_phage(50.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156553061.1\|243259_244386_-\|transposase	IS3 family transposase	U5P429	Shigella_phage	1.5e-90	62.0
WP_051659584.1\|244764_245046_-	hypothetical protein	NA	NA	NA	NA
WP_143106294.1\|245383_245590_-	hypothetical protein	A0A291AUJ1	Sinorhizobium_phage	3.4e-06	61.5
WP_082572772.1\|245627_246077_+	N-acetylmuramoyl-L-alanine amidase	A0A068CC96	Rhizobium_phage	5.1e-55	82.1
WP_034801528.1\|246194_246506_+	hypothetical protein	R9TN87	Rhizobium_phage	9.8e-13	46.1
WP_034801529.1\|248108_248375_-	hypothetical protein	A0A076G717	Sinorhizobium_phage	2.9e-37	85.2
WP_034801532.1\|248949_249141_+	helix-hairpin-helix domain-containing protein	A0A076G6K2	Sinorhizobium_phage	3.4e-24	82.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP015881

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1032731 : 1039754

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_034800622.1\|1032731_1033601_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	9.5e-90	57.6
WP_034800638.1\|1033616_1034504_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.2e-34	37.1
WP_034800620.1\|1034512_1035574_-	dTDP-glucose 4,6-dehydratase	A0A1D8EQC0	Escherichia_phage	6.6e-93	50.4
WP_034800618.1\|1035626_1036181_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	2.8e-34	41.8
WP_034800616.1\|1036412_1037648_-	hypothetical protein	NA	NA	NA	NA
WP_034800614.1\|1037652_1038822_-	acylneuraminate cytidylyltransferase	A0A1B1IVD3	uncultured_Mediterranean_phage	6.7e-06	29.6
WP_034800612.1\|1038821_1039754_-	N-acetylneuraminate synthase	A0A1B1IVE2	uncultured_Mediterranean_phage	5.5e-19	27.7

DBSCAN-SWA_2

1165051 : 1174092

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_082936560.1\|1165051_1166209_+	CDP-glucose 4,6-dehydratase	A0A222YY99	Synechococcus_phage	7.9e-15	25.0
WP_051659418.1\|1166198_1167449_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	C7U074	Ostreococcus_tauri_virus	5.8e-72	43.7
WP_034798286.1\|1167451_1168675_+	class I SAM-dependent methyltransferase	A0A1V0SJ68	Klosneuvirus	2.3e-41	29.9
WP_034798288.1\|1168768_1169749_+	NAD(P)-dependent oxidoreductase	A0A0E3FNQ3	Synechococcus_phage	1.8e-12	25.6
WP_156553063.1\|1169763_1170777_+	glycosyltransferase	I1TED8	Salmonella_phage	1.2e-43	33.3
WP_051659419.1\|1170748_1171186_+	GtrA family protein	NA	NA	NA	NA
WP_034798293.1\|1171303_1172203_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA
WP_034798295.1\|1172202_1174092_+	sulfate adenylyltransferase subunit CysN	A0A2K9L4R9	Tupanvirus	6.6e-27	43.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP015880

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP015880_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015880_1

1374421-1374524

Orphan

Consensus_repeat	Method
AAGAAGGCTCCGGCCAAGAAGAAGGCCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015880_1

>merge|NZ_CP015880|1|1374421-1374524|CRISPRCasFinder
AAGAAGGCTCCGGCCAAGAAGAAGGCCGCCGCCAAGGCTGAAGCCACGGAAGGCGAAGAAGCCGCTGCTCCGAAGAAGAAGGCTCCGGCCAAGAAGAAGGCCGC

>NZ_CP015880|1|1|1374421-1374524|CRISPRCasFinder
AAGAAGGCTCCGGCCAAGAAGAAGGCCGC	CGCCAAGGCTGAAGCCACGGAAGGCGAAGAAGCCGCTGCTCCGAAG
AAGAAGGCTCCGGCCAAGAAGAAGGCCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015880.1\|WP_034796587.1\|1378400_1379579_+\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|379751
NZ_CP015880.1\|WP_034796590.1\|1375686_1377102_-\|Si-specific-NAD(P)(+)-transhydrogenase	unknown	unknown	gnl\|CDD\|235373
NZ_CP015880.1\|WP_034796568.1\|1384440_1385658_+\|LL-diaminopimelate-aminotransferase	unknown	unknown	gnl\|CDD\|181674
NZ_CP015880.1\|WP_034796605.1\|1366234_1367077_+\|phytoene/squalene-synthase-family-protein	unknown	unknown	gnl\|CDD\|224478
NZ_CP015880.1\|WP_034796579.1\|1382057_1383896_-\|class-I-poly(R)-hydroxyalkanoic-acid-synthase	unknown	unknown	gnl\|CDD\|213656
NZ_CP015880.1\|WP_034796601.1\|1367761_1369180_-\|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO	unknown	unknown	gnl\|CDD\|235416
NZ_CP015880.1\|WP_064816989.1\|1369280_1369424_-\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|227744
NZ_CP015880.1\|WP_034796596.1\|1372035_1372617_+\|GDYXXLXY-domain-containing-protein	unknown	unknown	gnl\|CDD\|379571
NZ_CP015880.1\|WP_034796583.1\|1380448_1381288_-\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP015880.1\|WP_034796585.1\|1379663_1380452_-\|DNA-repair-protein-RadC	unknown	unknown	gnl\|CDD\|178801
NZ_CP015880.1\|WP_034796603.1\|1367207_1367675_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015880.1\|WP_034796588.1\|1377305_1378349_+\|magnesium-and-cobalt-transport-protein-CorA	unknown	unknown	gnl\|CDD\|213364
NZ_CP015880.1\|WP_034796607.1\|1365827_1366214_+\|membrane-protein	unknown	unknown	gnl\|CDD\|226260
NZ_CP015880.1\|WP_034796598.1\|1370929_1372039_+\|DUF2157-domain-containing-protein	unknown	unknown	gnl\|CDD\|227209
NZ_CP015880.1\|WP_034796570.1\|1384005_1384314_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015880.1\|WP_064816990.1\|1369857_1370001_-\|DUF1127-domain-containing-protein	unknown	unknown	gnl\|CDD\|227744
NZ_CP015880.1\|WP_034796609.1\|1363255_1365826_+\|protein-translocase-subunit-SecDF	unknown	unknown	gnl\|CDD\|237805
NZ_CP015880.1\|WP_034796581.1\|1381318_1382038_-\|DNA/RNA-nuclease-SfsA	unknown	unknown	gnl\|CDD\|234733
NZ_CP015880.1\|WP_034796592.1\|1374695_1375496_-\|endonuclease/exonuclease/phosphatase-family-protein	unknown	unknown	gnl\|CDD\|377028
NZ_CP015880.1\|WP_034796611.1\|1362874_1363210_+\|preprotein-translocase-subunit-YajC	unknown	unknown	gnl\|CDD\|224775

Protein	Function_ID	Function_description	E-value
NZ_CP015880.1\|WP_034796590.1\|1375686_1377102_-\|Si-specific-NAD(P)(+)-transhydrogenase	gnl\|CDD\|235373	PRK05249, PRK05249, Si-specific NAD(P)(+) transhydrogenase.	0
NZ_CP015880.1\|WP_034796568.1\|1384440_1385658_+\|LL-diaminopimelate-aminotransferase	gnl\|CDD\|181674	PRK09148, PRK09148, LL-diaminopimelate aminotransferase.	0
NZ_CP015880.1\|WP_034796605.1\|1366234_1367077_+\|phytoene/squalene-synthase-family-protein	gnl\|CDD\|224478	COG1562, ERG9, Phytoene/squalene synthetase [Lipid metabolism].	7.14365e-62
NZ_CP015880.1\|WP_034796579.1\|1382057_1383896_-\|class-I-poly(R)-hydroxyalkanoic-acid-synthase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NZ_CP015880.1\|WP_034796601.1\|1367761_1369180_-\|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO	gnl\|CDD\|235416	PRK05335, PRK05335, tRNA (uracil-5-)-methyltransferase Gid; Reviewed.	0
NZ_CP015880.1\|WP_064816989.1\|1369280_1369424_-\|DUF1127-domain-containing-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	1.52306e-13
NZ_CP015880.1\|WP_034796596.1\|1372035_1372617_+\|GDYXXLXY-domain-containing-protein	gnl\|CDD\|379571	pfam14345, GDYXXLXY, GDYXXLXY protein. This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 171 and 199 amino acids in length. It contains a conserved GDYXXLXY motif.	4.73165e-39
NZ_CP015880.1\|WP_034796583.1\|1380448_1381288_-\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	2.10514e-159
NZ_CP015880.1\|WP_034796585.1\|1379663_1380452_-\|DNA-repair-protein-RadC	gnl\|CDD\|178801	PRK00024, PRK00024, DNA repair protein RadC.	4.81651e-108
NZ_CP015880.1\|WP_034796587.1\|1378400_1379579_+\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|379751	pfam15887, Peptidase_Mx, Putative zinc-binding metallo-peptidase. This family has a highly conserved HHExxH motif with a highly conserved ED pairing downstream. HExxH is indicative of a zinc-binding metallo-peptidase.	1.83639e-141
NZ_CP015880.1\|WP_034796588.1\|1377305_1378349_+\|magnesium-and-cobalt-transport-protein-CorA	gnl\|CDD\|213364	cd12830, MtCorA-like, Mycobacterium tuberculosis CorA-like subfamily. This bacterial subfamily belongs to the Thermotoga maritima CorA (TmCorA)-like family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This subfamily includes the Mg2+ transporter Mycobacterium tuberculosis CorA (which also transports Co2+). Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.38059e-149
NZ_CP015880.1\|WP_034796607.1\|1365827_1366214_+\|membrane-protein	gnl\|CDD\|226260	COG3737, COG3737, Uncharacterized conserved protein [Function unknown].	4.32698e-64
NZ_CP015880.1\|WP_034796598.1\|1370929_1372039_+\|DUF2157-domain-containing-protein	gnl\|CDD\|227209	COG4872, COG4872, Predicted membrane protein [Function unknown].	1.29925e-45
NZ_CP015880.1\|WP_064816990.1\|1369857_1370001_-\|DUF1127-domain-containing-protein	gnl\|CDD\|227744	COG5457, COG5457, Uncharacterized conserved small protein [Function unknown].	1.55443e-14
NZ_CP015880.1\|WP_034796609.1\|1363255_1365826_+\|protein-translocase-subunit-SecDF	gnl\|CDD\|237805	PRK14726, PRK14726, protein translocase subunit SecDF.	0
NZ_CP015880.1\|WP_034796581.1\|1381318_1382038_-\|DNA/RNA-nuclease-SfsA	gnl\|CDD\|234733	PRK00347, PRK00347, DNA/RNA nuclease SfsA.	7.32756e-119
NZ_CP015880.1\|WP_034796592.1\|1374695_1375496_-\|endonuclease/exonuclease/phosphatase-family-protein	gnl\|CDD\|377028	pfam03372, Exo_endo_phos, Endonuclease/Exonuclease/phosphatase family. This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling. This family includes: AP endonuclease proteins EC:4.2.99.18, DNase I proteins EC:3.1.21.1, Synaptojanin an inositol-1,4,5-trisphosphate phosphatase EC:3.1.3.56, Sphingomyelinase EC:3.1.4.12, and Nocturnin.	1.18116e-09
NZ_CP015880.1\|WP_034796611.1\|1362874_1363210_+\|preprotein-translocase-subunit-YajC	gnl\|CDD\|224775	COG1862, YajC, Preprotein translocase subunit YajC [Intracellular trafficking and secretion].	1.62339e-34

>NZ_CP015880.1|WP_034796596.1|1372035_1372617_+|GDYXXLXY-domain-containing-protein
MTTAKTRWLNPLLAALLVAGVQTAALGYMIESRASILRSGRDVLLKTVPVDPRDLLRGDYVILSYDISRLQPELFKGDTPKQSEEAKVYVRLERQLDGFWAATEASFAPLSPAGDSVVLRSLPFTYYPSSALSSVNVEYGIERFYVPEGEGRTLEEARNAEALSVNIRVDAKGKAQIREIAVNGSPVYEEPLY
>NZ_CP015880.1|WP_034796598.1|1370929_1372039_+|DUF2157-domain-containing-protein
MYRARLERDFKHWMDKGLLQENAARAMLAEYDGRESTFRAGRVLLILAALLLSASILLLVAANWEALPRLARVAGIVALVWGFHFAAAWLTQTGRTTLAAAALVLGVAAFGGGIALIGQMYHLSGDAADAALLWFAGAVLTALAFRSAAMTAVAGGLAWFYFGTVLQDNGFGATPDWRVWSVPALAVIVVLLVRFTAADRARHLAYLLVLSWLAWLYLDNASLAFAGGLAAFGLVAFLAATLPGSPLRALAVDAGSAPAFYSFALALLGFTALQFEAVGVTTEVATGAGTLLVALLGIALAGAQNGAVRYLGYVAFAGELLYLAFETLGSMLGTSGFFLISGLVVAGIAWLVIRIEGHLANARGTEAPR
>NZ_CP015880.1|WP_064816990.1|1369857_1370001_-|DUF1127-domain-containing-protein
MNLARSFNNWRKYRQTCNELGRMTDRELSDLGIGRGDIPYVARQAIK
>NZ_CP015880.1|WP_064816989.1|1369280_1369424_-|DUF1127-domain-containing-protein
MNPIRIAKSWINYRRTVSELGNLSNHALNDIGITRYDIRNIAARSFR
>NZ_CP015880.1|WP_034796601.1|1367761_1369180_-|methylenetetrahydrofolate--tRNA-(uracil(54)--C(5))-methyltransferase-(FADH(2)-oxidizing)-TrmFO
MSKDTSSHSPIHVIGGGLAGSEAAWQIAEAGVPVILHEMRGVRGTDAHKTDGLAELVCSNSFRSDDATSNAVGVLHAEMRLAGSLIMKSADANQVPAGGALAVDRDGFSDAVSAAIAAHPLITVVREEVTGLPPKDWDLAVIATGPLTAPGLAEAIRAETGADALAFFDAIAPIVYTETIDMDICWFQSRYDKVGPGGTGKDYINCPMTEEQYNAFVDALIAGDKTGFKEWEGTPYFDGCLPIEVMAERGRETLRHGPMKPMGLTNAHNPTVKPYAVVQLRQDNALGTLYNMVGFQTKLKYGAQAEVFRMIPGLENAEFARLGGLHRNTYINSPTLLDGTLTLKSRPGLRFAGQITGCEGYVESASIGLLAGRFAAAERKGETLATPPATTAFGALLNHITGGHIVSDDEPGKRSFQPMNVNFGLFPPLDPGAITKPEGVKRFRGKEKAVAKKQATASRALADCAAWLGKSA
>NZ_CP015880.1|WP_034796603.1|1367207_1367675_+|hypothetical-protein
MLWLLLIAVIVLVGAFYMWMNARAERDWDNPDAGSAMVEFGRAFPDEAIRALHSTADRTAIFLRLHDGKAGFIQSHGTHYVCHVIQPGKVRVNSSETGRGLIVHFPDFAYLDNDFEFQSAGEAAEVSLWLLGSFSPKSEFEQPAAEPPHTAQATE
>NZ_CP015880.1|WP_034796605.1|1366234_1367077_+|phytoene/squalene-synthase-family-protein
MHDNSAQILADLRDTDRDRYLACLLAPADKQPALAALYAFSAEIARIRDLVHEPIPGEIRMQWWRDLIGNDASTGEGHPLAEALLGCIRAHRLPVSVFENMIDARIFDLYDDPMEDRSALEGYAGETASALIQLSSLVLDPENAAKSAEVAGHGGVAQTVAGLLMLLPLHLRRGQVYLPAELLRATGLDRETLIAGQDSAAISQAIRAFAGFGRDHLARARAQMEAIAPSNFPAFIPLALVEPILNRAEAAGAGLLQKPIRPAQWQRQWWMWRAARRRRF
>NZ_CP015880.1|WP_034796607.1|1365827_1366214_+|membrane-protein
MPKGIEIREAHFPGRAPIDAYGNGGFRFADMSHRGSILMLPSGVYAWDVAEGDALTVEKFYKVVDEAKDIEVLLVGTGKDIRPLPADVKTALRAANISSDPMSTGAAVRTYNVMLAESRAVAVALIAV
>NZ_CP015880.1|WP_034796609.1|1363255_1365826_+|protein-translocase-subunit-SecDF
MRRLPPLKRILVWLVALAGIAFALPNVLSREEAAELPSWLPHRQVALGLDLQGGSHFMLRAARSDIVAERLETIANEVGKSLRDADIAYIGLSGEGQSIAFRVRDRSQLSAARERLRPLTAPVDIGGFGSEPISEVVFDSAEPDELVRLRLTDEGIDYRLSLAVAQSIDVVRRRVAEVGAIEPLIQRRGDDRLIVQVPGLGDPQRLKDLLSQRANLALRMLDTSVPVQRAVEGQPPSGTEVLYSFDDPPVPYLVEKAPLLAAANFVAAQPEPDASGESASVAIKIDTASQQRVAALAAQQPPKDAAIVLDGQVIATLKLSEAVNSDTLRISADLPTEGATDLAALVRTGPLATPLTFVEERTVGPGVGGDAIADGLKAGLVAAVAVAASMIFFYGVFGVFAVIALALNIVLIIAALSLSGATLTLPGIAGIILTIGVAVDSNVLIYERLREEVRGAEPLRRTINNAFSRVFSSIFDANLTMLIASAILFYLGSGSVRGFAVTLAIGSVTTLFTAYTVTRLIVKRWLRQWKSERLPKGIRTGRFSDLDIRFMRIRNPVFILMAALSLASVLLLAGIGLNLGVDFKGGSIIELHSKGGPVDVADLRARLDELNFGEVQVQQLGSGEDVLVRVPSQEAGDNAEQTAAGVIRSELSDEYDFRRVEVVGPVVSGELTRAGTIGLAVSFLAILLYVWLRFEWRFAVGAIIATTHDVLLTIGFLVLTGIEFNLGSIAAVLTIVGYSLNDTVVIYDRIRENLARYKRMPLSVLIDTSINQTLSRTILTALTTVLALTALYLFGGGLIRAFSVTMLFGVIVGTISSIYIAGPILILFRKRTDHIPGDENASGADTGAAGAAKGAV
>NZ_CP015880.1|WP_034796611.1|1362874_1363210_+|preprotein-translocase-subunit-YajC
MFITEAFAQTAGAPSAGGADILMSILPFLLIFVVMYFLIIRPQRAQMKRREELLKNIRRGDQVVTGGGIVGKVTKVVDDSELEVEIADGVKIRVVRSGVSEVRVKGEPVKE
>NZ_CP015880.1|WP_034796592.1|1374695_1375496_-|endonuclease/exonuclease/phosphatase-family-protein
MRILSLNAWGGKLHSPLMKYLADVDADVLCLQEVARSPTTEAEWLSYRDADVELPQRANLFDEIAAVLPGHDGFFCPTARGTLFSGDTPVASEFGLATFVRRGYSVIGQALGFVHGSFSPDSWGPHPRARNAHCIRLFDHDAGTPITIAQMHGLREVGGKNDSPACRAQAEALVGLVHQVWPGDERLVVCGDFNVLPDSQTFQTLGQLGLVDLVVSRGHTDTRTSHYLKSGRFADYMLANGAVSVARFDVVAEPEVSDHRALLLDA
>NZ_CP015880.1|WP_034796590.1|1375686_1377102_-|Si-specific-NAD(P)(+)-transhydrogenase
MNQFDLIVVGSGPAGRRGAIQAAKLGKKVLVIEQGKRVGGVSVHTGTIPSKTLRETALNLSGWRERGFYGRSYRVKQEISADDLRQRLIITLNHEVEVLEHQFARNRVQQMRGKASFVNPTTLEVVKDDGETMLVSGTSIMLAVGTKPFRPDYMPFDGKTVLDSDELLDIETLPRSMVVIGAGVVGIEYATIFSALDTQVTVIDPKTTMLDFIDKEIVEDFIYQLRDRNMKLHLGQKADTVERLDDGKVLLTLDNGRKITTDMVLFAAGRMGATDTLNLPAAGLEADNRGRLKVNPETFQTSVPNIYAAGDVVGFPSLASTSMEQGRIAARVAIGAIAMEPQKYFPYGIYAVPEISTCGLSEEEVKERGIPYECGIARFRETSRGHIMGLDSGLLKMIFSLKTRRLLGVHIIGEGATELVHIGQAVLNLKGTVEYFVENTFNYPTLAEAYKIAGLDAWNRMGEIKQEAPKA
>NZ_CP015880.1|WP_034796588.1|1377305_1378349_+|magnesium-and-cobalt-transport-protein-CorA
MGLELTNRALPQSGAEGVMPHSQPQPGVVAAAVYENGVRVRDIRIEDAGKWRDRPGTVIWIGLHEPDAELLRQIQQEFDLHDLAIEDACKAHQRPKLEIYGDSIFVVARTAHMVGDEIAFGETHLFVGRGYVISVRHGASTSYMAVRQRCEASPAALAHGENYILYSILDFIVDNYMPVIEAIHEEVEELEDRLLRERLVKGDIERLYLLRRNLLRLRNAVVPLVDVCRRHEHIDLPGMDAALQPLFRDVTDHVRRVQEDIDALREVLAFTFEASLMVGQSEQTEISRKLASWAAILAVPTAIAGIYGMNFDDMPELKFRYGYFVVLAVIIGLCGTLYRFFRRAKWL
>NZ_CP015880.1|WP_034796587.1|1378400_1379579_+|DNA-polymerase-III-subunit-gamma/tau
MATLLQTLGDLIGTNWKHRDVPKRYSRTFVCRCGSHVFFGNMFCNSCQAPLGYLPGEDALLPLDPGPQPGIWAAGEERPLLKYCGNRDTPAQCNWMLMASEPGELCIACRLNRTIPNLDREDNASYWGLLEVAKRRLVSQLLALGLPVKSKVDEDEKHGLMFDFLRSPPNGPRVLTGHADGLITVNIEEADSVQREKMRLEFYEPYRTLLGHLRHEVGHYYWNRLVFNGPWLEPFRTLFGDERADYAAALKANYDNGAPPDWADRYISSYASTHPWEDWAETWAHYLHMIDSLGTALGFGLDAEDLEAIVEPFERDALYAPDDTGADGFLSLLNSWIEMTMVLNELARSMGQPDFYPFVMSKPSVAKLQFVHMVVEASRSAGTESVEAGFLG
>NZ_CP015880.1|WP_034796585.1|1379663_1380452_-|DNA-repair-protein-RadC
MTKRSISPDGDFVPSADERTFFPQLQLDNSPAAKKAPALEAHYHGHRDRLRARYRESGDAALADYEILEMLLFRLIPRKDTKPIAKALLARFGTLAGVFGAPIALLQEVSGIGEAVALDLKLISTIGHRTLKSELRQKQLLSSWSAVIDYCHAAMAYETKEQFRILFLDKRNTLIADEVQQKGTIDHTPVYPREVVKRALELSATAIILVHNHPSGDPTPSRADIDMTKLIVETAKPLGIAVHDHIIIGKDGHVSLKGLRLF
>NZ_CP015880.1|WP_034796583.1|1380448_1381288_-|type-I-methionyl-aminopeptidase
MVTYIEAGSAPYKNTGVIRLYGPEGFEGMRKACQVTARCLDELVSRVQPGVTTDEIDRFVFEFGMDNGALPATLNYRGYTKSSCTSINHVVCHGIPNDKPLREGDIVNIDVTYVVDGWHGDSSRMYPVGEIKRAAERLLDVTHESLMRGIAAVRPGARTGAIGEAIQVYAEAERCSVVRDFCGHGVGKLFHDAPNILHYGRANEGPELREGMIFTIEPMINLGRPHVKVLSDGWTAVTRDRSLSAQYEHTVGVTADGCEIFTLSPAGLFKPGVSTLGAA
>NZ_CP015880.1|WP_034796581.1|1381318_1382038_-|DNA/RNA-nuclease-SfsA
MIFDPPLTTATLVQRYKRFLFDALLPDGTAMTGSCPNTGSMRGLTTPGSRIWMSEHDSPTRKYRQMLEIVEADGTMVGINTGLPNRLAEEAIRLGLVSDLHTYEHSAREQKYGRNSRIDILLSDPERGRAYVEVKNVHFSRSPGLSEFPDSPTTRGAKHLDELGDMVEAGHRAVMIYLVQRDDCDRLRICREFDPAYARAFDRAMSRGVEAYAVKCQVSPTQIRPTGLMTVDEAALAAL
>NZ_CP015880.1|WP_034796579.1|1382057_1383896_-|class-I-poly(R)-hydroxyalkanoic-acid-synthase
MTAERNAEGKDGYAGFDPKSVEPYIVKDPESLAVNLARAMEQLGKAASAWLAPRESGQKSDTFAEPVTDMVKTLSKVSEYWLSDPRRTLEAQTHLMGSFFEIWSRTLHRMSGEETAEPAALQRNDKRFTDEDWVKNPFFDFIRQAYFVTSDWAERMVEDAEGLDDHTKHKAAFYVRQVSSALSPTNFVTTNPQLYRETVASSGANLVKGMQMFAEDIAAGRGDLKLRQTDTSKFAIGENIAMTPGKVIAQSDVCQVLQYEATTETVLKRPLLICPPWINKFYVLDLNPQKSFIKWAVDQGHTVFVISWVNPDERHATKDWEAYAREGIGFALDIVEQATGEREVNAIGYCVGGTLLAATLALHAAEGDDRIRSATLFTTQVDFTHAGDLKVFVDEDQISQIEQNMSVTGYLDGSKMATAFNMLRASELIWPYFVNNYLKGQEPLPFDLLYWNSDSTRMPAANHSFYLRNCYLDNKLSKGEMVLAGKQVSLGDVKIPIYNLATKEDHIAPPRSVFLGSASFGGKVTYVLSGSGHIAGVVNPPDKGKYQFWTGGAPTGDFDDWFKAAKETPGSWWPHWHQWIEKLDKRRVAPRKPGGPLNSLEEAPGSYVRARA
>NZ_CP015880.1|WP_034796570.1|1384005_1384314_+|hypothetical-protein
MLAVGKQRSITWVAGIVLLGTLAGCNSQGTNFENYPSVYGQKPAATSQMTNDEAASMQARLSSLGAARKSGAISEAEYQRRLKEMRALAEQHGADALKEIQN
>NZ_CP015880.1|WP_034796568.1|1384440_1385658_+|LL-diaminopimelate-aminotransferase
MEEFHKVRRLPPYVFEQVNRLKASARAAGADIIDLGMGNPDLPTPQSIVDKLCEAVQDPRTHRYSSSKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPTYPIHAFGFLMAGGVIRSISVEPDETFFGPLERAVRHSIPKPLALILNYPSNPTAQVATLDFYKDVIAFAKKHDIIVLSDLAYSEIYFNDAPPPSVLEVPGAIDCTVEFTSMSKTFSMPGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATQALNGDGSDIAEVRNIYKRRRDVMVDSFGKAGFEVPPPAATMFAWAKIPEKFRHLGSLEFSKLLVEKADVAVAPGIGFGEQGDDYVRLALVENEHRIRQAARNIKKFLSTADETMHNVISLNAHR

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Crispr_ID: NZ_CP015880_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP015880_2

1782095-1782183

Orphan

Consensus_repeat	Method
AACGACCTCAGCCAGCCTCCGTCGTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP015880_2

>merge|NZ_CP015880|2|1782095-1782183|CRISPRCasFinder
AACGACCTCAGCCAGCCTCCGTCGTTTGGCAGCCCGGGTGCCCAGCCACAGCCGGCCCCCTCAAACGACCTCAGCCAGCCGCCGTCGTT

>NZ_CP015880|2|2|1782095-1782183|CRISPRCasFinder
AACGACCTCAGCCAGCCTCCGTCGTT	TGGCAGCCCGGGTGCCCAGCCACAGCCGGCCCCCTCA
AACGACCTCAGCCAGCCGCCGTCGTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP015880.1\|WP_034788467.1\|1772221_1772617_-\|transcriptional-repressor	unknown	unknown	gnl\|CDD\|223806
NZ_CP015880.1\|WP_034788421.1\|1790662_1791757_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226359
NZ_CP015880.1\|WP_034788432.1\|1784220_1785249_-\|L-glyceraldehyde-3-phosphate-reductase	unknown	unknown	gnl\|CDD\|381376
NZ_CP015880.1\|WP_034788417.1\|1792704_1793613_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP015880.1\|WP_034788435.1\|1782838_1783945_-\|TRAP-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|227009
NZ_CP015880.1\|WP_089044240.1\|1791761_1792703_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP015880.1\|WP_034788445.1\|1779797_1780373_+\|TRAP-transporter-small-permease-subunit	unknown	unknown	gnl\|CDD\|227011
NZ_CP015880.1\|WP_034788457.1\|1774528_1775530_+\|zinc-ABC-transporter-substrate-binding-protein-ZnuA	unknown	unknown	gnl\|CDD\|226908
NZ_CP015880.1\|WP_034788461.1\|1773439_1774345_-\|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224046
NZ_CP015880.1\|WP_034788451.1\|1777297_1777699_-\|RcnB-family-protein	unknown	unknown	gnl\|CDD\|227742
NZ_CP015880.1\|WP_156552963.1\|1777094_1777262_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP015880.1\|WP_034788423.1\|1788098_1790573_-\|glycoside-hydrolase-family-2-protein	unknown	unknown	gnl\|CDD\|225789
NZ_CP015880.1\|WP_034788438.1\|1782275_1782689_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|380345
NZ_CP015880.1\|WP_034788429.1\|1786572_1787334_-\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP015880.1\|WP_034788464.1\|1772616_1773447_-\|zinc-ABC-transporter-permease-subunit-ZnuB	unknown	unknown	gnl\|CDD\|181938
NZ_CP015880.1\|WP_051659132.1\|1785378_1786557_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP015880.1\|WP_034788469.1\|1771640_1772171_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|223735
NZ_CP015880.1\|WP_034788426.1\|1787403_1788093_-\|D-lyxose/D-mannose-family-sugar-isomerase	unknown	unknown	gnl\|CDD\|377827
NZ_CP015880.1\|WP_034788449.1\|1777823_1779452_-\|glycoside-hydrolase-family-43-protein	unknown	unknown	gnl\|CDD\|226038
NZ_CP015880.1\|WP_034788454.1\|1775847_1777050_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597

Protein	Function_ID	Function_description	E-value
NZ_CP015880.1\|WP_034788467.1\|1772221_1772617_-\|transcriptional-repressor	gnl\|CDD\|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	5.18332e-38
NZ_CP015880.1\|WP_034788421.1\|1790662_1791757_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	4.3494e-162
NZ_CP015880.1\|WP_034788432.1\|1784220_1785249_-\|L-glyceraldehyde-3-phosphate-reductase	gnl\|CDD\|381376	cd19150, AKR_AKR14A1, Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ/AKR14A1) and similar proteins. Escherichia coli L-glyceraldehyde 3-phosphate reductase (GPR/YghZ), also called GAP reductase, is a founding member of aldo-keto reductase family 14 member A1 (AKR14A1). It catalyzes the stereospecific, NADPH-dependent reduction of L-glyceraldehyde 3-phosphate (L-GAP). It is also involved in the stress response as a methylglyoxal reductase which converts the toxic metabolite methylglyoxal to acetol in vitro and in vivo.	0
NZ_CP015880.1\|WP_034788417.1\|1792704_1793613_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.41416e-72
NZ_CP015880.1\|WP_034788435.1\|1782838_1783945_-\|TRAP-transporter-substrate-binding-protein	gnl\|CDD\|227009	COG4663, FcbT1, TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component [Secondary metabolites biosynthesis, transport, and catabolism].	0
NZ_CP015880.1\|WP_089044240.1\|1791761_1792703_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	9.082e-83
NZ_CP015880.1\|WP_034788445.1\|1779797_1780373_+\|TRAP-transporter-small-permease-subunit	gnl\|CDD\|227011	COG4665, FcbT2, TRAP-type mannitol/chloroaromatic compound transport system, small permease component [Secondary metabolites biosynthesis, transport, and catabolism].	3.36492e-95
NZ_CP015880.1\|WP_034788457.1\|1774528_1775530_+\|zinc-ABC-transporter-substrate-binding-protein-ZnuA	gnl\|CDD\|226908	COG4531, ZnuA, ABC-type Zn2+ transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism].	1.17424e-152
NZ_CP015880.1\|WP_034788461.1\|1773439_1774345_-\|metal-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	4.88354e-102
NZ_CP015880.1\|WP_034788451.1\|1777297_1777699_-\|RcnB-family-protein	gnl\|CDD\|227742	COG5455, COG5455, Predicted integral membrane protein [Function unknown].	1.85507e-36
NZ_CP015880.1\|WP_051659132.1\|1785378_1786557_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.10202e-72
NZ_CP015880.1\|WP_034788423.1\|1788098_1790573_-\|glycoside-hydrolase-family-2-protein	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	0
NZ_CP015880.1\|WP_034788438.1\|1782275_1782689_-\|cupin-domain-containing-protein	gnl\|CDD\|380345	cd02215, cupin_QDO_N_C, quercetinase, N- and C-terminal cupin domains. This family contains quercetinase (also known as quercetin 2,3-dioxygenase, 2,3QD, QDO and YxaG; EC 1.13.11.24), a mononuclear copper-dependent dioxygenase that catalyzes the cleavage of the flavonol quercetin (5,7,3',4'-tetrahydroxyflavonol) heterocyclic ring to produce 2-protocatechuoyl-phloroglucinol carboxylic acid and carbon monoxide. Bacillus subtilis quercetin 2,3-dioxygenase (QDO) is a homodimer that shows oxygenase activity with several divalent metals such as Mn2+, Co2+, Fe2+, and Cu2+, although the preferred one appears to be Mn2+. The dioxygen binds to the metal ion of the Cu-QDO-quercetin complex, yielding a Cu2+-superoxo quercetin radical intermediate, which then forms a Cu2+-alkylperoxo complex which then evolves into endoperoxide intermediate that decomposes to the product. Quercetinase is a bicupin with two tandem cupin beta-barrel domains, both of which are included in this alignment model. The pirins, which also belong to the cupin domain family, have been shown to catalyze a reaction involving quercetin and may have a function similar to that of quercetinase.	2.84231e-14
NZ_CP015880.1\|WP_034788429.1\|1786572_1787334_-\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	1.62432e-34
NZ_CP015880.1\|WP_034788464.1\|1772616_1773447_-\|zinc-ABC-transporter-permease-subunit-ZnuB	gnl\|CDD\|181938	PRK09543, znuB, zinc ABC transporter permease subunit ZnuB.	1.80115e-85
NZ_CP015880.1\|WP_034788469.1\|1771640_1772171_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|223735	COG0663, PaaY, Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only].	8.20472e-87
NZ_CP015880.1\|WP_034788426.1\|1787403_1788093_-\|D-lyxose/D-mannose-family-sugar-isomerase	gnl\|CDD\|377827	pfam07385, Lyx_isomer, D-lyxose isomerase. Members of this family of sugar isomerases belong to the cupin superfamily. The enzyme from Cohnella laevoribosii has been shown to be specific for D-lyxose, L-ribose, and D-mannose. E. coli sugar isomerase (EcSI) has been structurally and functionally characterized and shows a preference for D-lyxose and D-mannose.	5.24752e-132
NZ_CP015880.1\|WP_034788449.1\|1777823_1779452_-\|glycoside-hydrolase-family-43-protein	gnl\|CDD\|226038	COG3507, XynB, Beta-xylosidase [Carbohydrate transport and metabolism].	0
NZ_CP015880.1\|WP_034788454.1\|1775847_1777050_+\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	1.61743e-127

>NZ_CP015880.1|WP_034788445.1|1779797_1780373_+|TRAP-transporter-small-permease-subunit
MRALLGFSRLIDTITEFIGKSVSWLILAAVLVSAGNAVIRKIFNMSSNAWLEAQWYLFGAAFMFAAAYTLSQNEHIRIDVVYGQFSRRVQHWIDLLGHLLFLMPFVLLVLYYLFPYVKMSYVSGEVSSSAGGLIIWPAKAILLFGFLLLAFQGVSEIIKKIAIMTGNMEDPTPYVPTHAPLDDVVSPETRP
>NZ_CP015880.1|WP_034788449.1|1777823_1779452_-|glycoside-hydrolase-family-43-protein
MTAMIRNPILPGFNPDPSICRVGDDYYIATSTFEWYPGVQIHHSRDLVNWRLVRRPLERASQLDMRGNPDSCGVWAPCLSYDDGLFWLVYTDVKRFDGNFKDAHNYIVTAEAIEATWSDPVYVNSSGFDPSLFHDDDGRKWFLNMQWNHRTESFGGSPKHPAFDGILLQEWDERTRRLVGPVKNIFAGSPLGLVEGPHLFKRNGWYYLTTAEGGTGYDHAVTMARSRAIYGPYEMHPDIYLITSKDHPEAPLQRAGHGQYVETPDGQAYHTHLTGRPLPPGRRCTLGRETALQKCVWRDDGWLYLENGGPVPEVLVPAPGPAGQVATPVVTETHFDGQALPVEFQWLRTPEPERIFSLEWRPGHLRLFGRESIGSWFEQALVARRQEHHSFRAETTVDFTAVTYQQVAGVTHYYNRHKFHALGITWHETLGRALTILSCPGDFPHGRLQFPVGSGIAIPDGPIDLAMDVRDNDLQFFWRANAAVDWQPIGPVLDAGVVSDEGGRGEHGSFTGAFAGMFAFDTSGAGKAADFDRFRYVSLAAS
>NZ_CP015880.1|WP_034788451.1|1777297_1777699_-|RcnB-family-protein
MKRLLIALVASSVLITPVAALAQPAGSFEVAQNYDRSRRPVDRDYDRHMDRRVDRHVDKHVTIEKRVIVKKKERWARGHRLSPAERRHMAQVRDYRYYKLRQPPRGQQWVRSGNDFLLISLATGVIVGLAAAR
>NZ_CP015880.1|WP_156552963.1|1777094_1777262_+|hypothetical-protein
MALNAAGRPVPMFDPFLGDEPADEDAPEAAGAIELLLFGDRQNPCAGYRKGEGAA
>NZ_CP015880.1|WP_034788454.1|1775847_1777050_+|GTP-binding-protein
MEKLPVTVLSGFLGAGKTTLLNHVLSNRDGLRVAVIVNDMSEVNIDAALVRDGGAGLSRTEEQLVEMTNGCICCTLRDDLLKEVRNLAEQNRFDYLLIESSGISEPLPVATTFDFRDEDGESLADVARLDTMVTVVDAANLLADYSSLDFLADRGETAGEGDTRTLVDLLVEQIEFADVVVLNKVGTATPEQVDAARKIIVGLNPDARLIETDFGKVNLREVLGTGRFDLAKAEEHPLWYKELHGFKDHIPETEEYGIRSFVYRARRPLDPMRFQAFLNRSWPGVLRAKGFFWLATRPHYVGEISQAGPLVRTGKMGLWWSAVPQEQWPREPGFLKAVGPYLDPVWGDRRQEIVFIGADPMDEAELRAELDACLIADERFRPERWRDLADPFASWSPRAA
>NZ_CP015880.1|WP_034788457.1|1774528_1775530_+|zinc-ABC-transporter-substrate-binding-protein-ZnuA
MKSTSALLFASTMLLAAPAAADSPNVVVSIKPIHSLVASIMQGVGEPSLIVEGAASPHTYNMKPSNASALQAAKVVFWVGPGLEAFLDKPLDALSSGAKVVELSEAPGIEKLKFREGGAFEAHDHGDEGHSEEGQSEEGHKHAEGEAGHDHGHDHDHGHGDADLHMWLDPMNAKAMAAEIEKTLTEADPANAGAYKANLDALNKRLDALDAKLTETVAPVKDKPFVVFHDAYQYFEHRYKVRVAGSITVSPEVLPGADRVSQIHAKIKELGATCVFAEPQFEPKLINVVIEGTPAKSGTLDPEAGTLEAGPDLYFQMMEGIGTSLKTCLASAS
>NZ_CP015880.1|WP_034788461.1|1773439_1774345_-|metal-ABC-transporter-ATP-binding-protein
MLNFRSPEALPLVNLSNAGVRRNGRWLVRGVEFSISPGEIVTLIGPNGSGKSTTAKTAIGVLKPDEGYVERKPGLKVGYVPQKLAVDWTLPLTVERLMTLTGPLKGREIEEALSATGVLHLAKSEVQHLSGGEFQRALLARAIARKPDLLVLDEPVQGVDFSGEIALYELIKQIRNRTGCGILLISHDLHIVMAETDTVVCLNGHVCCRGTPQAVSQSPEYQKLFGRRAANTLAVYSHHHDHTHLPDGRVLHADGSITEHCYPGDGHHHDDEENVHDHGEDCGCGHHSRLHGYDVKEKRDA
>NZ_CP015880.1|WP_034788464.1|1772616_1773447_-|zinc-ABC-transporter-permease-subunit-ZnuB
MLDDFFVRALIAGIGIAVMAGPLGCFVIWRRMAYFGDTMAHSALLGVALSLLLELNLMLSVFIVAAVVSVLLLFLQRRGALSTDALLGILSHSALSFGLVIVAFMTWVRIDLVGFLFGDILAVSESDIDIIWGGGILVIFAIVYLWRPLLASTVNPELAEAEGLKPERTRLFFMLLMALVIAIAMKIVGILLITSLLIIPAATARRFSTSPEVMAVLASVIGALAVTGGLFGSLHWDTPSGPSIVVAAVGLFVLSLLPIGRRPLEAAHHSTPGGHH
>NZ_CP015880.1|WP_034788467.1|1772221_1772617_-|transcriptional-repressor
MATPQLTKNQTLVMDALSHSEGPMSAYTILDKLRDHGFRAPLQVYRALDKLLEYGLVHRLESLNAFVACSCPHDHEHDHGVTAFTICEGCGQVTEFHDEAIEQRLSTLTRAQNFKTEKTTIEIRGHCQSCA
>NZ_CP015880.1|WP_034788469.1|1771640_1772171_+|gamma-carbonic-anhydrase-family-protein
MPLYALGSLRPQTPPKGSYWVAPDANVIGQIEIGEEVGIWFGVTLRGDNEPIRLGARTNIQENVVIHVDPGFPVTIGEGCTIGHGAIIHGCTIGENSLIGMGATVLNGAKIGRNCLVGANALVTEGKEFPDNSLIVGAPAKAIRTLDDAAVEGLKRSAAHYVKNWRRYAADLTRLD
>NZ_CP015880.1|WP_034788438.1|1782275_1782689_-|cupin-domain-containing-protein
MPSEGQSVVLGPDEGRRYDMGAIQAVFKADGAETAGRFSVSEWWLEARHEGPGAHKHDDNDEIFYVIEGTASVLVGDIWHQKPKGSLFVIPRGTMHDFKNESEARIGLLNVYVGGPFEEAMPMIVDWYRDNPAKRLD
>NZ_CP015880.1|WP_034788435.1|1782838_1783945_-|TRAP-transporter-substrate-binding-protein
MDRRSFIKNASLGGLAAAGAAALATPAIAQANPKVNWRLASSFPKSLDTIYGGGEVLSKYVSEATDGAFQIQVFAAGEIVPGLQAADAAAAGTVEACHTVAYYYWGKDPTWALGAAVPFALNARGMNAWHYHGGGIDLFNEFLGTQGLVGFPGGNTGVQMGGWFRKEIKTVADMQGLKMRIGGFAGKVVEKLGVVPQQIAGGDIYPALEKGTIDAAEWVGPYDDEKLGFYKVAPYYYYPGWWEGGPTVHAMFNKAAFEGLPKNYQSLLRTACHATDANMLQKYDYLNPSAIKRLVASGAKLSPFSAEILSACFDKANEVYAEMEASNPTFKKIWDSIKAFRGEYYLNAQIAEYNYDTFMMIQQRGGKL
>NZ_CP015880.1|WP_034788432.1|1784220_1785249_-|L-glyceraldehyde-3-phosphate-reductase
MTWLPAENRYDTMKYNRLGRSGLKLPAISLGLWHNFGGDTPHDRKVDMCRTAFDLGITHFDLANNYGPPPGSAETAFGEIMRTDFAHLRDELIISSKAGYDMWAGPYGEWGSRKYMIASCDQSLKRMGLDYVDIFYSHRFDPETPLEETCGALDHIVRSGRALYVGISSYNSQRTREAAAILKDLGTPCLIHQPSYSMLNRWIEDDGLIHTLEDLGIGSIVFSPLAQGMLTTKYLGGIPSDSRAAQNHFLKKDFIRPEIIDNIRKLNGIAEKRGQTLAQMALAWVLRNGRITSALIGASRSEQIVDCVKALENDTFTADELAEIDLYAREADINLWAKSAEL
>NZ_CP015880.1|WP_051659132.1|1785378_1786557_-|Gfo/Idh/MocA-family-oxidoreductase
MTKELGVGIIGCGNISTTYFKLAPLFRGIKVVACADINPAAAEARAAEYGVKAESIEALLANPDVDIVVNLTIPDAHYPVSKAILEAGKHVYSEKPLVLSLEQGEELRAIAKAKGLSVGCAPDTFLGGAHQLARSYVDAGKIGRVTSGTCHVMNPGMEMWHPNPDFFFLPGGGPILDLGPYYIANLINLIGPVKRVAALATMANPTRTITSEPRKGEVIPVRTPTNIHALLEFENGATITLSASWDVWSHRHANMELYGTEGSLYVPDPNFFGGTVEASGRDKKIEPLEPWDHPFGVANQEHPQGPMANYRTAGLADMALAILEGRDARCSLDRALHGVDVMVSILKSGEEGRFVELSTTCTQPAALGIEEARALLRETEEEMSGNRVAAAS
>NZ_CP015880.1|WP_034788429.1|1786572_1787334_-|sugar-phosphate-isomerase/epimerase
MKDVSFQLYSARNFPPFANVLKALGDAGYSQVEGYGALYAALSDAEIASFKEGLDDNGLAMPTAHFGLDMLESDPARVLEIAKALGIKAIYCPYLMPDQRPTDAAGWRAFGERLQKAGKPYRDAGLIFGWHNHDFEFAALPDGSIPQDLIFAGGPDLSWEADIAWIIRGGADPIAWIKKYGDRITAVHVKDIAPTGEKKDEDGWADVGEGTVDWKGLFAALSGTKARYFIAEHDNPSDFKRFAKRSLASIQSY
>NZ_CP015880.1|WP_034788426.1|1787403_1788093_-|D-lyxose/D-mannose-family-sugar-isomerase
MKRSHVNDIIAESDAFMKSFGFTLPPFAYWSPEQLKARVASDSPTIFDARLGWDITDYGKGRFEEFGLVLFTLRNGNAANLKTGQGMVYAEKLMITAKDQVNPLHRHAVKTEDIINRGGGSLVLQMYNSKPDGSVDEESDVVVATDARLRTLKAGDLLKLKAGESVTLLPGNWHAFWAEGADVLMGEVSTVNDDLTDNYFREPVGRFSAIEEDAGPAHLLVSDYDTWLR
>NZ_CP015880.1|WP_034788423.1|1788098_1790573_-|glycoside-hydrolase-family-2-protein
MLSEDFTRTAIRLDLAGDWQLSSVDNSHALAMELPGDVHSALLKAGVIDDPYVGRNENDVQWVAHKDWVIERTVTVGADDIAGYWYLDLEYLDTVASVFVNDKLVLEAENCFRRYRPDVSKTLVAGENRIRIVLHSSIAEGARRQAEQPFYVPYHPGNSPIANGNMLRKPQCHFGWDWNLAIAPLGVYGEIALCRLEIARIEHVTSKQVWLEDGSVDLVVTLTLFADGPGIVPVHFSLDEDRERLDCAVGKGETRITHVFTMSEPKRWWPAGSGEQHLSRLTVEVPQEQVTRQIGFRTVELLTDKDEAGSRFAFRVNGREIFCKGANWIPADALASRVTREGVEDLLTSAVDANMNMIRVWGGGFYEPDWFYDLCDRLGLMVWQDFMFACNLYPSTPDFLENVAAEVDYQAKRLSSHPSIAVWCGDNELVGALTWFDEPRKDRDRYLVSYDRLNRTIEVALKAALPEAIWWPSSPASGYLDFGDAWHADGSGDMHYWSVWHENKSFDNYRTVRPRFCSEFGFQSYTSMPVIRQFSAEKDLNIASPVIESHQKNVGGNERIAGTMFRYFRFPKDFPAFVYLSQVQQGLAIRTAVDYWRSLKPHCMGTLYWQLNDTWPVASWSSLDYGGSWKAMHYMVRRFFQPVSVAAIPSADGKEIAFSMVNDTAEPVTVELQTFLVSLDGQRTPLAAVAGTCSPDRAATLATIAAFDIPEGDLLFWSFEASNGMRGEGHHVNGTYKALDLKPSGLTLDVAPAGEGAFDVTVKASGLALHVMIEADVAGRYSDNAFDLLAGETKVIRFTPKVPFDAGELPRFSAFDLESCQGKG
>NZ_CP015880.1|WP_034788421.1|1790662_1791757_-|ABC-transporter-ATP-binding-protein
MQNVSVSVKDLSLSFGAVTVLDTLNLDIKDGEFLVLLGSSGCGKSTLLNCIAGLLDVSDGQIFIKNKNVTWEEPKDRGIGMVFQSYALYPQMSVEKNLSFGLQVAKVPKEEIDKRVSRAAEILQIQPLLKRKPSELSGGQRQRVAIGRALVRDVDVFLFDEPLSNLDAKLRSELRVEIKRLHQSLKNTMIYVTHDQIEALTLADRIAVMKSGVIQQLADPMTIYNAPENLFVAGFIGSPSMNFFRGELQLRDQRAYVHANGVDFDVSAYPSRAPFVHGQKVVLGLRPEHVRVDEAASGAPASHRAVVDIEEPMGADNLLWLKLAGQSMSVRIAGQRRYAPGTAVTLSFDMGVASIFDATSENRL
>NZ_CP015880.1|WP_089044240.1|1791761_1792703_-|carbohydrate-ABC-transporter-permease
MVAFNSVTEEAALQAQTNRVVAGPRGAKPRRALSGRNIMIYGTLIVVALYYLLPLYVMVMTSLKGMPEIRLGNIFAPPVEITFEPWAKAWASACTGLNCDGLSRGFWNSVRITVPSTIVSIAIASVNGYALANWRFKGAELFFTILIVGAFIPYQVMIYPIVIVLREMGIYGTLTGLILVHTIFGMPILTLLFRNYFAGLPEELFKAARVDGAGFWTIYFKIMLPMSLPIFVVAMILQVTGIWNDFLFGVVFTRPEYYPMTVQLNNIVNSVQGVKEYNVNMAATILTGAVPLFVYFVSGRLFVRGIAAGAVKG
>NZ_CP015880.1|WP_034788417.1|1792704_1793613_-|sugar-ABC-transporter-permease
MAGYTQGSGRPNQWLRNLNAKIASVPMILTAVVIFLGGTIWTVVYSFTNSKLLPRLSFVGLDQYERLWAAPRWLISVQNLAIYGIFSLIFSLLIGFVLAALMDQKIRFENTFRTIMLYPFALSFIVTGLVWQWLLNPEFGIQSVVRSLGWESFTFDPLYNADIVIYGILIAALWQGTGLVMCLMLAGLRGIDEDIWKAARVDGIPMWKTYIFVVIPMMRGVFITTLVIIASGIVKVYDLVVAQTSGGPGIASEVPAKYVYDYMFQAQNLGQGFAASTMMLITVAIIIVPWAYLEFGGGRKRV

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1350363 : 1365826

uncultured_Mediterranean_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_051659352.1\|1350363_1351443_+	beta-N-acetylhexosaminidase	A0A1B1IVS3	uncultured_Mediterranean_phage	7.3e-23	42.6
WP_034796647.1\|1351496_1352363_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.5e-34	35.7
WP_082572998.1\|1352322_1353084_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	3.0e-39	46.4
WP_034796644.1\|1353166_1354279_+	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	2.5e-10	32.6
WP_034796642.1\|1354370_1354577_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	5.7e-09	72.7
WP_034796640.1\|1354651_1355368_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_034796629.1\|1355364_1356207_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	5.9e-44	42.8
WP_034796627.1\|1356253_1357537_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	7.5e-99	46.5
WP_034796625.1\|1357563_1358334_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.6e-24	32.2
WP_034796623.1\|1358330_1358984_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.8e-16	35.1
WP_034796617.1\|1359200_1359845_+	hypothetical protein	NA	NA	NA	NA
WP_034796615.1\|1360032_1361586_+	peptidoglycan DD-metalloendopeptidase family protein	Q8SBN9	Clostridium_phage	1.1e-14	35.9
WP_034796613.1\|1361702_1362572_-	ATP-binding protein	NA	NA	NA	NA
WP_034796611.1\|1362874_1363210_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.3e-10	36.5
WP_034796609.1\|1363255_1365826_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	8.0e-60	48.6

DBSCAN-SWA_2

2835057 : 2880426

Sinorhizobium_phage(89.36%)

integrase,tail,capsid,head,portal,terminase

attL 2834796:2834813|attR 2878946:2878963

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2834796:2834813	attL	NA	NA	NA	NA
WP_034797750.1\|2835057_2836671_-	arylsulfatase	A0A2P0VMN7	Tetraselmis_virus	9.9e-141	50.9
WP_034797752.1\|2837079_2837463_+	hypothetical protein	NA	NA	NA	NA
WP_034797754.1\|2837462_2837852_+	hypothetical protein	A0A291AUP7	Sinorhizobium_phage	8.5e-14	50.0
WP_156553026.1\|2837831_2838776_-	ATP-dependent DNA ligase	A0A076GD42	Sinorhizobium_phage	2.3e-166	90.9
WP_034797758.1\|2839151_2839445_-	hypothetical protein	A0A076G8I1	Sinorhizobium_phage	1.0e-51	93.6
WP_034797760.1\|2839734_2839929_+	hypothetical protein	NA	NA	NA	NA
WP_051659383.1\|2839929_2840649_+	hypothetical protein	NA	NA	NA	NA
WP_167550697.1\|2840695_2841646_+	hypothetical protein	NA	NA	NA	NA
WP_034797764.1\|2841784_2842111_-	hypothetical protein	A0A291AUN9	Sinorhizobium_phage	1.7e-55	97.2
WP_034797766.1\|2842112_2842358_-	hypothetical protein	J7F8X5	Agrobacterium_phage	9.7e-16	67.2
WP_034797768.1\|2842254_2842473_-	hypothetical protein	A0A291AUN8	Sinorhizobium_phage	2.0e-28	83.3
WP_034797770.1\|2842474_2843362_-	chitinase	A0A291AUN6	Sinorhizobium_phage	4.3e-130	78.8
WP_051659384.1\|2843531_2843963_+	hypothetical protein	NA	NA	NA	NA
WP_051659385.1\|2844732_2845638_-	hypothetical protein	A0A291AUN5	Sinorhizobium_phage	7.3e-93	53.9
WP_034797773.1\|2845651_2847214_-	hypothetical protein	A0A291AUN3	Sinorhizobium_phage	5.7e-312	97.3
WP_034797775.1\|2847213_2847432_-	hypothetical protein	NA	NA	NA	NA
WP_034797776.1\|2847509_2847743_+	hypothetical protein	NA	NA	NA	NA
WP_034797778.1\|2847899_2850431_-	DUF1983 domain-containing protein	A0A291AUN1	Sinorhizobium_phage	0.0e+00	89.6
WP_034797780.1\|2850440_2850845_-	hypothetical protein	A0A291AUN0	Sinorhizobium_phage	1.1e-72	97.0
WP_051659386.1\|2851068_2851704_-	hypothetical protein	NA	NA	NA	NA
WP_034797782.1\|2851764_2852358_-	DUF2163 domain-containing protein	A0A291AUM8	Sinorhizobium_phage	3.2e-105	97.0
WP_034797785.1\|2852354_2853005_-	hypothetical protein	A0A291AUM9	Sinorhizobium_phage	9.6e-111	93.5
WP_034797787.1\|2853004_2854855_-\|tail	tail tape measure protein	A0A291AUM6	Sinorhizobium_phage	1.3e-208	66.8
WP_034797789.1\|2854900_2855227_+	hypothetical protein	NA	NA	NA	NA
WP_156553028.1\|2855242_2855485_-\|tail	phage tail assembly chaperone	A0A291AUN4	Sinorhizobium_phage	2.8e-31	84.8
WP_034797791.1\|2855484_2855889_-	hypothetical protein	A0A291AUM7	Sinorhizobium_phage	4.6e-55	86.2
WP_034797794.1\|2855900_2856311_-\|tail	tail protein	A0A291AUM5	Sinorhizobium_phage	9.8e-53	77.9
WP_034797796.1\|2856343_2856808_-	hypothetical protein	A0A291AUM4	Sinorhizobium_phage	3.2e-68	84.4
WP_034797798.1\|2856809_2857103_-	hypothetical protein	A0A291AUM3	Sinorhizobium_phage	1.8e-40	91.6
WP_034797800.1\|2857104_2857434_-	hypothetical protein	A0A291AUL9	Sinorhizobium_phage	4.8e-50	94.4
WP_034797802.1\|2857430_2857877_-	hypothetical protein	A0A291AUM1	Sinorhizobium_phage	3.0e-31	91.5
WP_034797804.1\|2857957_2858986_-\|capsid	major capsid protein	A0A291AUL7	Sinorhizobium_phage	9.6e-198	98.5
WP_034797806.1\|2859014_2859371_-\|head	head decoration protein	A0A291AUM0	Sinorhizobium_phage	9.1e-55	97.5
WP_034797809.1\|2859375_2859930_-	hypothetical protein	A0A291AUL6	Sinorhizobium_phage	2.9e-60	95.1
WP_034797811.1\|2859954_2860863_-	S49 family peptidase	A0A291AUM2	Sinorhizobium_phage	5.5e-165	98.0
WP_034797813.1\|2860859_2862581_-\|portal	phage portal protein	A0A291AUL8	Sinorhizobium_phage	0.0e+00	98.3
WP_034797815.1\|2862577_2862814_-\|head,tail	head-to-tail joining protein	A0A291AUL5	Sinorhizobium_phage	9.3e-32	96.2
WP_034797817.1\|2862822_2864868_-\|terminase	terminase	A0A291AUK9	Sinorhizobium_phage	0.0e+00	95.4
WP_034797819.1\|2864864_2865527_-	hypothetical protein	A0A291AUL0	Sinorhizobium_phage	4.1e-101	91.3
WP_034797821.1\|2865671_2866418_-	hypothetical protein	A0A291AUL1	Sinorhizobium_phage	1.0e-132	96.0
WP_082936530.1\|2866649_2867291_-	antitermination protein NusG	A0A291AUL3	Sinorhizobium_phage	2.0e-81	69.5
WP_156552983.1\|2867280_2868546_-	hypothetical protein	A0A291AUK7	Sinorhizobium_phage	2.2e-228	94.8
WP_064817020.1\|2868542_2869553_-	phosphoadenosine phosphosulfate reductase family protein	B7SYG0	Stenotrophomonas_phage	2.7e-80	47.3
WP_034797829.1\|2869621_2870329_+	hypothetical protein	NA	NA	NA	NA
WP_034797831.1\|2870346_2870643_-	hypothetical protein	A0A291AUK8	Sinorhizobium_phage	4.3e-42	93.5
WP_034797832.1\|2870639_2870840_-	hypothetical protein	NA	NA	NA	NA
WP_167550706.1\|2870836_2872267_-	S-adenosylmethionine-binding protein	A0A291AUK6	Sinorhizobium_phage	1.2e-28	63.1
WP_167550698.1\|2872362_2872515_-	hypothetical protein	A0A291AUK4	Sinorhizobium_phage	6.4e-18	90.0
WP_034797836.1\|2872514_2873003_-	hypothetical protein	A0A291AUJ7	Sinorhizobium_phage	1.9e-79	96.3
WP_034797838.1\|2873230_2873500_+	hypothetical protein	NA	NA	NA	NA
WP_034797844.1\|2874185_2874854_+	helix-turn-helix domain-containing protein	A0A1X9HW95	Ruegeria_phage	7.2e-21	36.2
WP_034797846.1\|2875074_2875290_+	hypothetical protein	A0A291AUK1	Sinorhizobium_phage	8.5e-24	80.3
WP_167550699.1\|2875369_2875543_+	hypothetical protein	A0A291AUK2	Sinorhizobium_phage	1.2e-20	87.7
WP_051659387.1\|2875542_2875869_+	hypothetical protein	A0A291AUJ8	Sinorhizobium_phage	4.3e-51	89.8
WP_034797848.1\|2875865_2876195_+	hypothetical protein	A0A291AUR1	Sinorhizobium_phage	3.2e-46	83.5
WP_034797850.1\|2876191_2876581_+	DUF4326 domain-containing protein	A0A291AUJ3	Sinorhizobium_phage	7.3e-58	80.8
WP_034797854.1\|2877101_2877476_+	HNH endonuclease	A0A291AUJ4	Sinorhizobium_phage	3.2e-58	83.7
WP_051659388.1\|2877764_2878856_+\|integrase	site-specific integrase	A0A291AUF0	Sinorhizobium_phage	3.3e-55	38.5
WP_034797856.1\|2879244_2879757_+	disulfide bond formation protein B	NA	NA	NA	NA
2878946:2878963	attR	NA	NA	NA	NA
WP_034797858.1\|2879868_2880426_-	HNH endonuclease	A0A223W0A5	Agrobacterium_phage	7.3e-35	42.6

DBSCAN-SWA_3

3003834 : 3012345

Sinorhizobium_phage(25.0%)

integrase

attL 3009537:3009555|attR 3021351:3021369

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156553003.1\|3003834_3004005_+	hypothetical protein	A0A076G8E1	Sinorhizobium_phage	4.5e-12	76.1
WP_034806299.1\|3004004_3004280_+	hypothetical protein	NA	NA	NA	NA
WP_167550702.1\|3004321_3004654_+	hypothetical protein	NA	NA	NA	NA
WP_034806677.1\|3004703_3005063_+	hypothetical protein	NA	NA	NA	NA
WP_051659734.1\|3005151_3005907_+	hypothetical protein	K4NWX3	Pseudomonas_phage	4.7e-53	50.0
WP_051659733.1\|3005899_3006565_+	YqaJ viral recombinase family protein	A0A076G6X1	Sinorhizobium_phage	2.1e-92	77.5
WP_082936519.1\|3006564_3007020_+	single-stranded DNA-binding protein	R9TP78	Rhizobium_phage	4.3e-49	63.8
WP_051659732.1\|3007023_3007482_+	hypothetical protein	NA	NA	NA	NA
WP_082936520.1\|3007650_3008025_+	HNH endonuclease	A0A141GF07	Brucella_phage	5.8e-28	57.8
WP_034806292.1\|3008065_3008329_+	hypothetical protein	A0A1P8DIX1	Virus_Rctr197k	1.2e-14	52.6
WP_034806288.1\|3008330_3009266_+	hypothetical protein	NA	NA	NA	NA
WP_034806285.1\|3009262_3010054_+	DNA cytosine methyltransferase	A0A1B1IRC8	uncultured_Mediterranean_phage	1.5e-73	46.9
3009537:3009555	attL	NA	NA	NA	NA
WP_034806282.1\|3010050_3010413_+	hypothetical protein	NA	NA	NA	NA
WP_034806279.1\|3010405_3010711_+	hypothetical protein	NA	NA	NA	NA
WP_034806275.1\|3010707_3010914_+	hypothetical protein	NA	NA	NA	NA
WP_034806272.1\|3011340_3012345_+\|integrase	site-specific integrase	A7J266	Streptococcus_phage	1.2e-06	28.3
3021351:3021369	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP015882

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP015881

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP015880

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection