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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP008724 Staphylococcus xylosus strain SMQ-121 chromosome, complete genome 2 crisprs WYL,csa3,DEDDh,cas3,DinG 0 1 6 0

Results visualization

1. NZ_CP008724
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008724_1 173384-173484 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008724_2 1138325-1138406 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP008724_2 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder 1138351-1138380 30 NZ_CP012101 Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence 182767-182796 8 0.733
NZ_CP008724_2 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder 1138351-1138380 30 NZ_CP013276 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence 116163-116192 8 0.733
NZ_CP008724_2 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder 1138351-1138380 30 NZ_CP039722 Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence 253501-253530 8 0.733
NZ_CP008724_2 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder 1138351-1138380 30 NZ_CP009349 Bacillus thuringiensis HD1002 plasmid 1, complete sequence 192163-192192 8 0.733
NZ_CP008724_2 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder 1138351-1138380 30 NZ_CP045023 Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence 116164-116193 8 0.733
NZ_CP008724_2 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder 1138351-1138380 30 NC_018689 Bacillus thuringiensis MC28 plasmid pMC429, complete sequence 23867-23896 8 0.733
NZ_CP008724_2 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder 1138351-1138380 30 NZ_CP045608 Bacillus cereus strain SB1 plasmid p2, complete sequence 127271-127300 8 0.733
NZ_CP008724_2 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder 1138351-1138380 30 MK448506 Streptococcus satellite phage Javan462, complete genome 11918-11947 9 0.7

1. spacer 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder matches to NZ_CP012101 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-2, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcattgcaattttctatataccctgtt	CRISPR spacer
ttagcattacaattttttatatacccttaa	Protospacer
  * ****.*******.**********   

2. spacer 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder matches to NZ_CP013276 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-1-360K, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcattgcaattttctatataccctgtt	CRISPR spacer
ttagcattacaattttttatatacccttaa	Protospacer
  * ****.*******.**********   

3. spacer 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder matches to NZ_CP039722 (Bacillus thuringiensis strain BT-59 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcattgcaattttctatataccctgtt	CRISPR spacer
ttagcattacaattttttatatacccttaa	Protospacer
  * ****.*******.**********   

4. spacer 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder matches to NZ_CP009349 (Bacillus thuringiensis HD1002 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcattgcaattttctatataccctgtt	CRISPR spacer
ttagcattacaattttttatatacccttaa	Protospacer
  * ****.*******.**********   

5. spacer 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder matches to NZ_CP045023 (Bacillus thuringiensis strain JW-1 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcattgcaattttctatataccctgtt	CRISPR spacer
ttagcattacaattttttatatacccttaa	Protospacer
  * ****.*******.**********   

6. spacer 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder matches to NC_018689 (Bacillus thuringiensis MC28 plasmid pMC429, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcattgcaattttctatataccctgtt	CRISPR spacer
ttagcattacaattttttatatacccttaa	Protospacer
  * ****.*******.**********   

7. spacer 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder matches to NZ_CP045608 (Bacillus cereus strain SB1 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.733

aaatcattgcaattttctatataccctgtt	CRISPR spacer
ttagcattacaattttttatatacccttaa	Protospacer
  * ****.*******.**********   

8. spacer 2.1|1138351|30|NZ_CP008724|CRISPRCasFinder matches to MK448506 (Streptococcus satellite phage Javan462, complete genome) position: , mismatch: 9, identity: 0.7

aaatcattgcaattttctatataccctgtt	CRISPR spacer
caatcattgcaattttttatataaataaag	Protospacer
 ***************.******  . .  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1109430 : 1147720 39 Staphylococcus_phage(96.3%) tRNA,protease NA
DBSCAN-SWA_2 1269231 : 1278430 7 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_3 1407743 : 1420105 14 uncultured_Mediterranean_phage(25.0%) NA NA
DBSCAN-SWA_4 1868548 : 1877024 9 Prochlorococcus_phage(33.33%) NA NA
DBSCAN-SWA_5 2115581 : 2131539 13 uncultured_Caudovirales_phage(41.67%) NA NA
DBSCAN-SWA_6 2144809 : 2152199 9 Pandoravirus(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage