CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP036550	Bacteroides fragilis strain DCMOUH0042B chromosome, complete genome	2 crisprs	cas2,cas1,cas9,PrimPol,RT,DEDDh,PD-DExK,csa3,cas6,cmr1gr7,cas10,cmr3gr5,cmr4gr7,cmr5gr11,cmr6gr7,WYL	6	2	1
NZ_CP036551	Bacteroides fragilis strain DCMOUH0042B plasmid pBFO42_1, complete sequence	0 crisprs	NA	0	0	0
NZ_CP036552	Bacteroides fragilis strain DCMOUH0042B plasmid pBFO42_2, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP036550_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036550_1

357366-357719

TypeII

Consensus_repeat	Method
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	PILER-CR
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	CRISPRCasFinder

4 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP036550_1

>merge|NZ_CP036550|1|357366-357719|PILER-CR,CRISPRCasFinder
GTTATGATTTACTTTCAAATTAGTATCTTTGAACCATTGGAAACAGCGATTCGAAGATATGCAAATGTAGCAAGTATGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGCAAGTACAACATCGATACCGATACCCTTTCCGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGCGATCGTGTTTGCGGAGCATTACCAAGAGGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGCTTGTTGCTGTCCGTGTCGTCCAGCGGGTAGGTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC

>NZ_CP036550|1|1|357366-357719|PILER-CR
GTTATGATTTACTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	GATTCGAAGATATGCAAATGTAGCAAGTAT
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	AAGTACAACATCGATACCGATACCCTTTCC
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	GATCGTGTTTGCGGAGCATTACCAAGAGG
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	TTGTTGCTGTCCGTGTCGTCCAGCGGGTAG
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC

>NZ_CP036550|1|1|357366-357719|CRISPRCasFinder
GTTATGATTTACTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	GATTCGAAGATATGCAAATGTAGCAAGTAT
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	AAGTACAACATCGATACCGATACCCTTTCC
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	GATCGTGTTTGCGGAGCATTACCAAGAGG
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC	TTGTTGCTGTCCGTGTCGTCCAGCGGGTAG
GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036550.1\|WP_005797651.1\|369554_372713_-\|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223911
NZ_CP036550.1\|WP_032529624.1\|364839_365052_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036550.1\|WP_080713767.1\|366869_367799_-\|lipase	unknown	unknown	gnl\|CDD\|238863
NZ_CP036550.1\|WP_005792006.1\|348985_349798_-\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|376576
NZ_CP036550.1\|WP_032586489.1\|350579_350840_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036550.1\|WP_032497502.1\|356244_356472_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036550.1\|WP_080713766.1\|364518_364899_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376574
NZ_CP036550.1\|WP_005791999.1\|345894_346842_-\|phosphate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|378974
NZ_CP036550.1\|WP_010993657.1\|344441_345875_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP036550.1\|WP_009293010.1\|360130_364441_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	cd09643_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|375967
NZ_CP036550.1\|WP_008770318.1\|349937_350381_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036550.1\|WP_005791995.1\|343275_344136_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213197
NZ_CP036550.1\|WP_005792001.1\|346844_347660_-\|energy-transducer-TonB	unknown	unknown	gnl\|CDD\|367555
NZ_CP036550.1\|WP_005791607.1\|369242_369536_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036550.1\|WP_005791628.1\|358163_359096_-\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP036550.1\|WP_005792004.1\|348352_348958_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792
NZ_CP036550.1\|WP_032529646.1\|365395_366883_-\|MBOAT-family-protein	unknown	unknown	gnl\|CDD\|224610
NZ_CP036550.1\|WP_010993659.1\|357827_358160_-\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP036550.1\|WP_005797652.1\|367752_369126_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238863
NZ_CP036550.1\|WP_005792003.1\|347689_348340_-\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|376792

Protein	Function_ID	Function_description	E-value
NZ_CP036550.1\|WP_005797651.1\|369554_372713_-\|efflux-RND-transporter-permease-subunit	gnl\|CDD\|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP036550.1\|WP_080713767.1\|366869_367799_-\|lipase	gnl\|CDD\|238863	cd01825, SGNH_hydrolase_peri1, SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	8.10389e-67
NZ_CP036550.1\|WP_005792006.1\|348985_349798_-\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|376576	pfam01618, MotA_ExbB, MotA/TolQ/ExbB proton channel family. This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.	1.71919e-31
NZ_CP036550.1\|WP_005792004.1\|348352_348958_-\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	1.15551e-12
NZ_CP036550.1\|WP_080713766.1\|364518_364899_-\|hypothetical-protein	gnl\|CDD\|376574	pfam01610, DDE_Tnp_ISL3, Transposase. Transposase proteins are necessary for efficient DNA transposition. Contains transposases for IS204, IS1001, IS1096 and IS1165.	5.11722e-08
NZ_CP036550.1\|WP_005792003.1\|347689_348340_-\|biopolymer-transporter-ExbD	gnl\|CDD\|376792	pfam02472, ExbD, Biopolymer transport protein ExbD/TolR. This group of proteins are membrane bound transport proteins essential for ferric ion uptake in bacteria. The Pfam family consists of ExbD, and TolR which are involved in TonB-dependent transport of various receptor bound substrates including colicins.	1.68278e-20
NZ_CP036550.1\|WP_005791999.1\|345894_346842_-\|phosphate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|378974	pfam12849, PBP_like_2, PBP superfamily domain. This domain belongs to the periplasmic binding protein superfamily.	6.26613e-37
NZ_CP036550.1\|WP_010993657.1\|344441_345875_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.11106e-06
NZ_CP036550.1\|WP_005791995.1\|343275_344136_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213197	cd03230, ABC_DR_subfamily_A, ATP-binding cassette domain of the drug resistance transporter and related proteins, subfamily A. This family of ATP-binding proteins belongs to a multi-subunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryotic systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	1.74028e-49
NZ_CP036550.1\|WP_005792001.1\|346844_347660_-\|energy-transducer-TonB	gnl\|CDD\|367555	pfam03544, TonB_C, Gram-negative bacterial TonB protein C-terminal. The TonB_C domain is the well-characterized C-terminal region of the TonB receptor molecule. This protein is bound to an inner membrane-bound protein ExbB via a globular domain and has a flexible middle region that is likely to help in positioning the C-terminal domain into the iron-transporter barrel in the outer membrane. TonB_C interacts with the N-terminal TonB box of the outer membrane transporter that binds the Fe3+-siderophore complex. The barrel of the transporter, consisting of 22 beta-sheets and an inside plug, binds the iron complex in the barrel entrance.	9.40269e-21
NZ_CP036550.1\|WP_005791628.1\|358163_359096_-\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	1.84378e-135
NZ_CP036550.1\|WP_032529646.1\|365395_366883_-\|MBOAT-family-protein	gnl\|CDD\|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	3.18271e-86
NZ_CP036550.1\|WP_010993659.1\|357827_358160_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.3546e-26
NZ_CP036550.1\|WP_005797652.1\|367752_369126_-\|hypothetical-protein	gnl\|CDD\|238863	cd01825, SGNH_hydrolase_peri1, SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.	3.37201e-62
NZ_CP036550.1\|WP_009293010.1\|360130_364441_-\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|375967	pfam18541, RuvC_III, RuvC endonuclease subdomain 3. Cas9 proteins are abundant across the bacterial kingdom, but vary widely in both sequence and size. All known Cas9 enzymes contain an HNH domain that cleaves the DNA strand complementary to the guide RNA sequence (target strand), and a RuvC nuclease domain required for cleaving the noncomplementary strand (non-target strand), yielding double-strand DNA breaks (DSBs). The crystal structures of type II-A and II-C Cas9 proteins highlight the features in Cas9 enzymes that support their function as RNA-guided endonucleases. Cas9 enzymes adopt a bilobed architecture composed of a nuclease lobe containing juxtaposed RuvC and HNH nuclease domains and a variable alpha-helical lobe likely to be involved in nucleic acid binding. The RuvC domain forms the structural core of the nuclease lobe, a six-stranded beta sheet surrounded by four alpha helices, with all three conserved subdomains (I, II, III) contributing catalytic residues to the active site.	4.40484e-47

>NZ_CP036550.1|WP_032497502.1|356244_356472_-|hypothetical-protein
MPYFCIRFPRDGQHLILTCCNGVGRALQNNKNNFLFIWIIIIKVVIFAVRFAERGPLVVFSFPFAQRGLEIKDGH
>NZ_CP036550.1|WP_032586489.1|350579_350840_+|hypothetical-protein
MEKVLLTSPPIKQIIQSSETSYIKPIHSLESPLLQGSVPPRDAEIPTSSNNRYIGQEKAIGFPIAISIKKVLSGGQPGAPFPSLPV
>NZ_CP036550.1|WP_008770318.1|349937_350381_-|hypothetical-protein
MRTSVKFILMFVLLMLSFSISGNALNITECSHKSVNSCQVSASSLDTNYSYRYGSDITGFDKSQTLSVSDVELGFKPVSETYSSNNLRLRRILEDSDLFKDTMRKWCLVRENLLVLDQSKSYYSDKDPHYASISCHYYIFALRRILI
>NZ_CP036550.1|WP_005792006.1|348985_349798_-|MotA/TolQ/ExbB-proton-channel-family-protein
METTQKKSTKIVGIKNAGLVIICCFIIAVCIYHFILGNPTNFMNNDPNNHPLPGNFMGTIYKGGVIVPVIQTLLLTVLALSIERYFALRSAFGRGSLVKFVSNIKEALSVGDLRKAQEICDKQRGSVANVVTSTLRKYEEMENESSLSKDQKLLAIQKELEEATALELPMMEQNLPIIGTITTLGTLMGLLGTVIGMIRSFAALAAGGSADSMALSQGISEALINTAFGILTGALAVISYNYYTNKIDKLTYSLDEVGFSIVQTFAATHK
>NZ_CP036550.1|WP_005792004.1|348352_348958_-|biopolymer-transporter-ExbD
MGRAKIKKKSTFIDMTAMSDVTVLLLTFFMLTSTFVKKEPVQVTTPASVSEIKIPEKNILQILVDPNGKIFMSMDKQSDLKAVLESMGQEYGVTFTPEQEKKFMLASTFGVPMKNMKTYLDLPTDKQDAVLKNEGIPCDSLDNQFKSWVRNARAVNSDLRIAIKADADTPYSVIKNVMNSLQDLRENRYNLITSLKTTSEN
>NZ_CP036550.1|WP_005792003.1|347689_348340_-|biopolymer-transporter-ExbD
MSAEVQESGKKKGNSKQKKMTVRVDFTPMVDMNMLLITFFMLCTSLSKPQTMEISMPSNDKNITEEQQSKVKASQAITLLLGPDDKLYYYEGEPNYKDYTSLKETTYKPDGLRGILLKKNATAVRQVNDLKQKKLELKISEDEFTKQLSEIKSGKNTPTVIIKAMDNASYKNLIDALDEMQICNIGKYVITNIAEADEFLVKNFESKGELSQNIAD
>NZ_CP036550.1|WP_005792001.1|346844_347660_-|energy-transducer-TonB
MAKIDLTSFEWCELIFKGKNKAYGAYKMRADSPKRHNVAMVIVLIIALVGFSLPTLIKMATPKQKEVMTEVTTLSQLEEPEVKQEEMKRVEPVAPPPPALKSSIKFTAPVIKKDEEVHEDDEIKSQEELTQTKVAISIADVKGNDEANGKDIADLKQVVTQAEPAEEQVFDMVEQMPTFPGGTTELMKYIGEHLKYPPIAAENGTQGKVICRFVIGKDGQVRDVTIARSLDPYCDKEAIRVIKSMPKWIPGKQNGKAVAVNFTVPIVFKLQ
>NZ_CP036550.1|WP_005791999.1|345894_346842_-|phosphate-ABC-transporter-substrate-binding-protein
MTKKQFWLIGAWSLIALSACSSKPKDGLTDTYTSGVIAITADESFQPIVQEEIDVFEGLFPLAGIVPRYTTEVDAINQLLKDSVRLAITTRTLTPEEMNSFHSRKFFPREIKLATDGLALIVNRQNADSLISVRDIRRILTGQVQKWKELYPASGLGDIQLVFDNKNSSTVRFAVDSICKGAPLSDKDVKALKTNQQVIDYVAHTPDAIGVIGVNWLGNRSDTTNLSFRDEIRVMSVSADDVATVENSYKPYQAYLYYGNYPLARPIYVLLNDPRNALPWGFASFLTSDRGQRIILKSGLVPATQPVRIVDVKDE
>NZ_CP036550.1|WP_010993657.1|344441_345875_-|tetratricopeptide-repeat-protein
MKRFQLFLVGAFVAAGPLFAQSADADWHSEVAKVKELIQANPAQASEEAAQLLKGKNKKNTDLLIAIGQAYLEAGKVNEAEAYAALGQKANSKSAAVSVLQGDIAVAKKDAGKACQLYEQAIYFDPNYKEAYLKFADVYKGASPQLAIEKLEQLKNLDPSCVAADKKLAEVYYLNNKFDKAAEAYAHFINTPEATEDDLTKYSFALFLNHDFEKSLQIALMGLQKNPRDAAFNRLAMYNYTDLKRYDEAMKAADAFFKESDKADFSYLDYMYFGHLLNAVKKYDQAVEAYMKAITLDPAKTDLWREVSSSYELNNEFAKAIEAYKKYSESLSADKRTPDVQFQIGKLYYEKGTQSDTLTVSLDERKAALVSADSIFTEIAKVAPDSYLGNFWRARTNSALDPETTQGLAKPYYEEVAAFLIDKNDPRYNSALIECYSYLGYYYLVANKLPESKEYWNKILAIDPANATAKRALDGIK
>NZ_CP036550.1|WP_005791995.1|343275_344136_-|ATP-binding-cassette-domain-containing-protein
MKMITVENLSFLYRKSKRAVLHDFSLSLEKGRVYGLLGKNGAGKSTLLYLMSGLLTPKSGKVVYHDVDVRRRLPITLQDMFLVPEEFDLPPVSLISYIELNSPFYPRFSKEDMVKYLHYFEMDINIDLGALSMGQKKKVFMSFALATNTSLLLMDEPTNGLDIPGKSQFRKFIASGMTDDKTILISTHQVRDIDKVLDHVLIMDNSRVLLNESTMSICDKLFFTESENRELLQSSLFSTPSIQGNFLLLPNESGEDSEINLELLFNATLAVPERISALFHSKQIEL
>NZ_CP036550.1|WP_010993659.1|357827_358160_-|CRISPR-associated-endonuclease-Cas2
MDRFNEYRIMWVLVLFDLPTETKKEKKAYADFRKNLQKDGFTMFQFSIYVRHCGSSENAAVHIKRVKSFLPEFGHVGIMCITDKQFGDIELFYGKKVQDVNTPGQQLELF
>NZ_CP036550.1|WP_005791628.1|358163_359096_-|type-II-CRISPR-associated-endonuclease-Cas1
MIKKTLYFGNPVYLSLRNAQLVIKLPDVEKATVLPETLKKQAEVTKPIEDIGIVVLDNKQITITSGVLEALLENNCSVITCDSRSMPVGLMLPLYGNTTQNERFRKQLDTSLPLKKQLWQQTIQAKINNQASVLKDCMDEEVKCMRIWATNVRSGDPDNLEARAAAYYWKSLFSDVDSFTREREGIPPNNLLNYGYAILRAVVARGLVISGLLPTLGIHHHNRYNAYCLADDIMEPYRPYVDELVFSLIQEYGKNAELTKEMKTRLLTVPTLEVIIGGKRSPLMVAVGQTTASLYKCFNGELRRISYPER
>NZ_CP036550.1|WP_009293010.1|360130_364441_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKRILGLDLGTNSIGWALVNEAENKDERSSIVKLGVRVNPLTVDELTNFEKGKSITTNADRTLKRGMRRNLQRYKLRRETLTEVLKEHKLITEDTILSENGNRTTFETYRLRAKAVTEEISLEEFARVLLMINKKRGYKSSRKAKGVEEGTLIDGMDIARELYNNNLTPGELCLQLLDAGKKFLPDFYRSDLQNELDRIWEKQKEYYPEILTDVLKEELRGKKRDAVWAICAKYFVWKENYTEWNKEKGKTEQQEREHKLEGIYSKRKRDEAKRENLQWRVNGLKEKLSLEQLVIVFQEMNTQINNSSGYLGAISDRSKELYFNKQTVGQYQMEMLDKNPNASLRNMVFYRQDYLDEFNMLWEKQAVYHKELTEELKKEIRDIIIFYQRRLKSQKGLIGFCEFESRQIEVDIDGKKKIKTVGNRVISRSSPLFQEFKIWQILNNIEVTVVGKKRKRRKLKENYSALFEELNDAEQLELNGSRRLCQEEKELLAQELFIRDKMTKSEVLKLLFDNPQELDLNFKTIDGNKTGYALFQAYSKMIEMSGHEPVDFKKPVEKVVEYIKAVFDLLNWNTDILGFNSNEELDNQPYYKLWHLLYSFEGDNTPTGNGRLIQKMTELYGFEKEYATILANVSFQDDYGSLSAKAIHKILPHLKEGNRYDVACVYAGYRHSESSLTREEIANKVLKDRLMLLPKNSLHNPVVEKILNQMVNVINVIIDIYGKPDEIRVELARELKKNAKEREELTKSIAQTTKAHEEYKTLLQTEFGLTNVSRTDILRYKLYKELESCGYKTLYSNTYISREKLFSKEFDIEHIIPQARLFDDSFSNKTLEARSVNIEKGNKTAYDFVKEKFGESGADNSLEHYLNNIEDLFKSGKISKTKYNKLKMAEQDIPDGFIERDLRNTQYIAKKALSMLNEISHRVVATSGSVTDKLREDWQLIDVMKELNWEKYKALGLVEYFEDRDGRQIGRIKDWTKRNDHRHHAMDALTVAFTKDVFIQYFNNKNASLDPNANEHAIKNKYFQNGRAIAPMPLREFRAEAKKHLENTLISIKAKNKVITGNINKTRKKGGVNKNMQQTPRGQLHLETIYGSGKQYLTKEEKVNASFDMRKIGTVSKSAYRDALLKRLYENDNDPKKAFAGKNSLDKQPIWLDKEQMRKVPEKVKIVTLEAIYTIRKEISPDLKVDKVIDVGVRKILIDRLNEYGNDAKKAFSNLDKNPIWLNKEKGISIKRVTISGISNAQSLHVKKDKDGKPILDENGRNIPVDFVNTGNNHHVAVYYRPVIDKRGQLVVDEAGNPKYELEEVVVSFFEAVTRANLGLPIIDKDYKTTEGWQFLFSMKQNEYFVFPNEKTGFNPKEIDLLDVENYGLISPNLFRVQKFSLKNYVFRHHLETTIKDTSSILRGITWIDFRSSKGLDTIVKVRVNHIGQIVSVGEY
>NZ_CP036550.1|WP_080713766.1|364518_364899_-|hypothetical-protein
MDKVALSCGELSILSNKASHGGKGSIVAIIRGMDIYMVSSVLFRLSRRRYQVRDIKLDMTPNMEQIVRSCFPTAKRVIDRFHKKLAYEAVLETLVAQKRTRQMPHPKCFHNGIVLIVICFKLVTQR
>NZ_CP036550.1|WP_032529624.1|364839_365052_+|hypothetical-protein
MGSLVAEYGEFTARKGDFINTDVSTDILFKKQLILCMGKLIPVKITTNDCGITASEEHRQRYTKSSITYN
>NZ_CP036550.1|WP_032529646.1|365395_366883_-|MBOAT-family-protein
MFPIDIDFSRLLEAFKYNPDAPMIFSSGIFLWLFAAFMVIYTLLQHRNTARILFVALFSYYFYYKSSGTYFFLLAIVTVTDFVIAWLMDRTDVRWKRKFCVVLSVSVNLGLLCYFKYTNFLGGVIASLMGGEFTALDIFLPVGISFFTFQSLSYTIDVYRKEIKPLTSLLDYAFYVSFFPQLVAGPIVRARDFIPQIRKPLYVSQEMFGRGIFLIVAGLFKKAVISDYISINFVERIFDNPTLYSGVENLMGLYGYALQIYCDFSGYSDMAIGIALLLGFHFNLNFNSPYKSASITEFWRRWHISLSSWLRDYLYISLGGNRHGKFRQYLNLIITMFLGGLWHGASWNFVLWGTFHGVALALHKAWMSIIGRKKGETSHGIRRVLGVIITFHFVCFCWIFFRNADFHNSMDMLNQIFTAFRPQLFPQLMEGYWRVFALMAVGFLLHFAPDSWENAVCRGVIKLPFLGKAIVMVAMIYLVIQMKSSEIQPFIYFQF
>NZ_CP036550.1|WP_080713767.1|366869_367799_-|lipase
MEKNSMKGERPMRLNRWLGVLILLLSGVWSVRAQDLLPACPQVDKGTKACKPMREPGSLGDTVSVKIVFPVAFKGVGRNEVVDSLGILAPVLEHLRLVQNGSSEDTVRIVHIGDSHIRGHIFPRTTGARLTETFGAISYTDMGVNGATCLTFTHPDRIAAIAALKPELLILSFGTNESHNRKYNSNVHYRQMEELLELLHDSLPDVPILMTTPPGSYESFRQRRRRRTYAINPRTVTAVNTIHDFARRHKLVVWDMYNVVGGSLRACKNWSDARLMRPDHVHYLPEGYTLQGELLYEAIIKAYNEYVSH
>NZ_CP036550.1|WP_005797652.1|367752_369126_-|hypothetical-protein
MKNYLKYSLWLTLIVLFALIGMHWLPAITIDGHTMRRVDLLSDVRMPEPDKDEVVADSLPPVPVVKPAFVDTCRSGMTCIEDYSDSTMRGMTPFYRALDEIQSKGRLVRIAVFGDSFIEADIFTADLREMLQKRFGGCGVGFVTITSMTSGYRPTVRHSFGGWSSHAVTDSVYFDKKKQGISGHYFVPRERAYVELRGQNKYASLLDTCQIASIFFYNKGEVNLSVCVNRGEAEARDFSTTGRLQQMKVNGRIGSVRWDINRADSTLFYGVAMDGTQGVVVDNFSLRGSSGLSLRSIPSKMLQEFNAQRPYDLIILEYGLNVATERGRNYDPYKKGLLTAINHLKECFPQAGFLLLSVGDRDYKTDTGELRTMPGVKNLIRYQQNIAAESGIAFWNMFEAMGGEGSMAGLVHAKPSLANYDYTHINFRGGRHLAGLLYETLIYGKEQYERRKAYEAE
>NZ_CP036550.1|WP_005791607.1|369242_369536_-|hypothetical-protein
MKSVLITFDQAYYERIIALLDRLGCRGFTYLERVQGRGSKTGDPHFGSHAWPSMCSAIITVVDDKKVDPLLDALHRMDMQTEQLGLRAFVTNVERSI
>NZ_CP036550.1|WP_005797651.1|369554_372713_-|efflux-RND-transporter-permease-subunit
MSLYEGAVKKPIMTSLCFLAVVIFGLFSLSKLPIDLYPDIDTNTIMVMTAYPGASASDIENNVTRPLENTLNAVSNLKHITSRSSENMSLITLEFEYGNDIDVLTNDVRDKLDMVSSQLPDDVENPIIFKFSTDMIPIVLLSVQANESQSALYKILDDRVVNPLARIPGVGTVSISGAPQREIQVYCDPGKLEAYNLTIETISSIIGAENKNIPGGNFDIGNETYSLRVEGEFDDSRQLEDVVVGSYNGANVYLRDVARVVDTVEERAQETYNNGVKGAMIVVQKQSGANSVDISKKVAEALPKLQKNLPSDVKLGVIVDTSDNILNTIDSLAETVLYALLFVVIVVFLFLGRWRATLIICITIPLSLIASFIYLAVTGNTINIISLSSLSIAIGMVVDDAIVVLENVTTHIERGSDPKQAAVHGTNEVAISVIASTLTMIAVFFPLTMVSGMSGVMFKQLGWMMCAIMFISTVAALSLTPMLCSQLLRLQKKQSKTFKLLFGPIEKGLDALDTGYARMLNWAVRHRPIVIFGCIVFFVVSLFCAKSIGTEFFPAQDNARIAVQLELPIGTRKELAQEVSEKLTNQWLNKYKGVMTVCNYTVGQADSDNTWASMQDNGSHIISFNISLVDPGDRDISLEQVCDEMREDLKKYPEFSKAQVILGGSNTGMSAQASADFEVYGYSMEETDSVAARLKRELLNVKGVSEVNISRSDYQPEYQVDFDREKLALHGLNLATAGNYLRNRINGAIASKYREDGDEYDIKVRYAPEYRTSIESIENILIYNSRGEAVRVKELGKVVERFAPPTIERKDRERIVTVSAVISGEALGNVVNAGNAIIDKMDIPSDVTIQVAGSYEDQQDSFRDLGTLAILIVVLVFIVMAAQFESLTYPFIIMFSLPFAFSGVLMALFFTKSTLSVMSLLGAIMLIGIVVKNGIVLIDYITLCRERGLAVLNSVVTAGKSRLRPVLMTTATTVLGMIPMAIGGGQGSEMWSPMAIAVIGGLTVSTILTLVLIPTLYCVFAGTGIKHQRKVLRRKRELEAYFEEHKDEMIKK

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Crispr_ID: NZ_CP036550_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP036550_2

3687746-3689184

TypeIII

Consensus_repeat	Method
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	PILER-CR
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	CRISPRCasFinder
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	CRT

20 spacers

cas2,cas1,cmr6gr7,cmr5gr11,cmr4gr7,cmr3gr5,cas10,cmr1gr7

The CRISPR arrays of NZ_CP036550_2

>merge|NZ_CP036550|2|3687746-3689184|PILER-CR,CRISPRCasFinder,CRT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGACAAAACGGCACAACGACCGTTTATCTCAAATACGGCATGTAGATGTATTCCAGTATAATAAGGATTAAGACGTCTGATCGGTTTCAAAGCTCCCGTATTCGATAATGTAGATGTATTCCAGTATAATAAGGATTAAGACATTTTGAGAAACTTTCCAAATGTATCACATGTTTCAAATGTAGATGTATTCCAGTATAATAAGGATTAAGACGCTTTTTCATTTTTTAATAATTTTAAGTGTTATAAAATGTAGATGTATTCCAGTATAATAAGGATTAAGACTTGCTACTCTCTTGCTGTTGTTTTTTACTGAAGTTATGTAGATGTATTCCAGTATAATAAGGATTAAGACAACTCTTAAATTATTTAATTCAATTTCTTTTTCCACCATGTAGATGTATTCCAGTATAATAAGGATTAAGACAAAATTAATAAATAAACTTCCATAGCTTTTATTTTATGTAGATGTATTCCAGTATAATAAGGATTAAGACGATATTTTCAATCATATCATCCGTTTGCCGATACTATGTAGATGTATTCCAGTATAATAAGGATTAAGACATAAATCATTTAATTAAAAAACATTACTATAAAAAATGTAGATGTATTCCAGTATAATAAGGATTAAGACATAGTTATTAGGTCAGAAACAGCTCCCGTTTTTATGTAGATGTATTCCAGTATAATAAGGATTAAGACCATATATATCATAATTTCTGATGTCTCTTTTGCTGATATGTAGATGTATTCCAGTATAATAAGGATTAAGACGAGCGTCCAGCATTTCCGATTCAACGACTAAGAAAATGTAGATGTATTCCAGTATAATAAGGATTAAGACTTTGGAGCATTGTCTATCATAAAAATTCCGTAATATGTAGATGTATTCCAGTATAATAAGGATTAAGACAAGCCATCCCTGATGAGTTTTGCGACAGGAAAAAATGTAGATGTATTCCAGTATAATAAGGATTAAGACGAAAATCAAAGTTAAATTTTCCTTCTACAAAAACTTTATGTAGATGTATTCCAGTATAATAAGGATTAAGACACGCTTTTTCCAGAAGCCGGTTACGCCAATTCTATGTAGATGTATTCCAGTATAATAAGGATTAAGACACAAATTTCTAAGAACCAGAGACTGTGCCGCTTTGTATGTAGATGTATTCCAGTATAATAAGGATTAAGACAAATATGCCTGGGTACGCATATTAATTGTGTCATATGTAGATGTATTCCAGTATAATAAGGATTAAGACTTTCCTGTCCCGGTGTGAGCTTGACGCGAACTTTCATATGTAGATATATTCCAGTATAATAAGGATTAAGACCAATGCCCAGAAATACTGCAAACTTTCCTTATTAGCATGTAGATGTATTCCAATATAAAAATTTAACTACA

>NZ_CP036550|2|2|3687746-3688972|PILER-CR
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAAACGGCACAACGACCGTTTATCTCAAATACGGC
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GTCTGATCGGTTTCAAAGCTCCCGTATTCGATA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATTTTGAGAAACTTTCCAAATGTATCACATGTTTCAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GCTTTTTCATTTTTTAATAATTTTAAGTGTTATAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	TTGCTACTCTCTTGCTGTTGTTTTTTACTGAAGTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AACTCTTAAATTATTTAATTCAATTTCTTTTTCCACC
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAAATTAATAAATAAACTTCCATAGCTTTTATTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GATATTTTCAATCATATCATCCGTTTGCCGATACT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATAAATCATTTAATTAAAAAACATTACTATAAAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATAGTTATTAGGTCAGAAACAGCTCCCGTTTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	CATATATATCATAATTTCTGATGTCTCTTTTGCTGAT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GAGCGTCCAGCATTTCCGATTCAACGACTAAGAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	TTTGGAGCATTGTCTATCATAAAAATTCCGTAAT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAGCCATCCCTGATGAGTTTTGCGACAGGAAAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GAAAATCAAAGTTAAATTTTCCTTCTACAAAAACTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ACGCTTTTTCCAGAAGCCGGTTACGCCAATTCT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ACAAATTTCTAAGAACCAGAGACTGTGCCGCTTTGT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC

>NZ_CP036550|2|2|3687746-3689113|CRISPRCasFinder
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAAACGGCACAACGACCGTTTATCTCAAATACGGC
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GTCTGATCGGTTTCAAAGCTCCCGTATTCGATA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATTTTGAGAAACTTTCCAAATGTATCACATGTTTCAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GCTTTTTCATTTTTTAATAATTTTAAGTGTTATAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	TTGCTACTCTCTTGCTGTTGTTTTTTACTGAAGTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AACTCTTAAATTATTTAATTCAATTTCTTTTTCCACC
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAAATTAATAAATAAACTTCCATAGCTTTTATTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GATATTTTCAATCATATCATCCGTTTGCCGATACT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATAAATCATTTAATTAAAAAACATTACTATAAAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATAGTTATTAGGTCAGAAACAGCTCCCGTTTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	CATATATATCATAATTTCTGATGTCTCTTTTGCTGAT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GAGCGTCCAGCATTTCCGATTCAACGACTAAGAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	TTTGGAGCATTGTCTATCATAAAAATTCCGTAAT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAGCCATCCCTGATGAGTTTTGCGACAGGAAAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GAAAATCAAAGTTAAATTTTCCTTCTACAAAAACTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ACGCTTTTTCCAGAAGCCGGTTACGCCAATTCT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ACAAATTTCTAAGAACCAGAGACTGTGCCGCTTTGT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAATATGCCTGGGTACGCATATTAATTGTGTCAT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	TTTCCTGTCCCGGTGTGAGCTTGACGCGAACTTTCAT
ATGTAGATATATTCCAGTATAATAAGGATTAAGAC

>NZ_CP036550|2|1|3687746-3689184|CRT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAAACGGCACAACGACCGTTTATCTCAAATACGGC
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GTCTGATCGGTTTCAAAGCTCCCGTATTCGATA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATTTTGAGAAACTTTCCAAATGTATCACATGTTTCAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GCTTTTTCATTTTTTAATAATTTTAAGTGTTATAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	TTGCTACTCTCTTGCTGTTGTTTTTTACTGAAGTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AACTCTTAAATTATTTAATTCAATTTCTTTTTCCACC
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAAATTAATAAATAAACTTCCATAGCTTTTATTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GATATTTTCAATCATATCATCCGTTTGCCGATACT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATAAATCATTTAATTAAAAAACATTACTATAAAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ATAGTTATTAGGTCAGAAACAGCTCCCGTTTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	CATATATATCATAATTTCTGATGTCTCTTTTGCTGAT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GAGCGTCCAGCATTTCCGATTCAACGACTAAGAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	TTTGGAGCATTGTCTATCATAAAAATTCCGTAAT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAGCCATCCCTGATGAGTTTTGCGACAGGAAAAA
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	GAAAATCAAAGTTAAATTTTCCTTCTACAAAAACTTT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ACGCTTTTTCCAGAAGCCGGTTACGCCAATTCT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	ACAAATTTCTAAGAACCAGAGACTGTGCCGCTTTGT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	AAATATGCCTGGGTACGCATATTAATTGTGTCAT
ATGTAGATGTATTCCAGTATAATAAGGATTAAGAC	TTTCCTGTCCCGGTGTGAGCTTGACGCGAACTTTCAT
ATGTAGATATATTCCAGTATAATAAGGATTAAGAC	CAATGCCCAGAAATACTGCAAACTTTCCTTATTAGC
ATGTAGATGTATTCCAATATAAAAATTTAACTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP036550.1\|WP_005787783.1\|3682514_3683354_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	cd09682_cmr4gr7_CAS-III-B	gnl\|CDD\|274210
NZ_CP036550.1\|WP_005787805.1\|3694402_3694786_+\|GtrA-family-protein	unknown	unknown	gnl\|CDD\|377229
NZ_CP036550.1\|WP_022348096.1\|3684743_3687014_+\|CRISPR-associated-endonuclease-Cas1	cas1	cd09634_cas1_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|275209
NZ_CP036550.1\|WP_032529217.1\|3679560_3681363_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cls000742_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP036550.1\|WP_005815829.1\|3699005_3699278_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036550.1\|WP_032529219.1\|3683779_3684724_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|213662
NZ_CP036550.1\|WP_005815846.1\|3677653_3678133_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP036550.1\|WP_005793776.1\|3697579_3698200_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP036550.1\|WP_005787799.1\|3690100_3691285_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|99747
NZ_CP036550.1\|WP_137572667.1\|3678146_3679556_+\|hypothetical-protein	cmr1gr7	mkCas0086_cmr1gr7_CAS-III-B	unknown
NZ_CP036550.1\|WP_005787774.1\|3676181_3677657_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|213356
NZ_CP036550.1\|WP_032529218.1\|3683366_3683777_+\|hypothetical-protein	cmr5gr11	mkCas0098_cmr5gr11_CAS-III-B	unknown
NZ_CP036550.1\|WP_011202849.1\|3695761_3696877_-\|agmatine-deiminase-family-protein	unknown	unknown	gnl\|CDD\|377332
NZ_CP036550.1\|WP_005787793.1\|3687007_3687298_+\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP036550.1\|WP_005787816.1\|3698203_3698998_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|377092
NZ_CP036550.1\|WP_010993022.1\|3691519_3692563_+\|YegS/Rv2252/BmrU-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP036550.1\|WP_008660290.1\|3694865_3695750_-\|carbon-nitrogen-hydrolase	unknown	unknown	gnl\|CDD\|143597
NZ_CP036550.1\|WP_011202848.1\|3692644_3694402_+\|aspartate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234775
NZ_CP036550.1\|WP_005803563.1\|3696957_3697485_-\|ferredoxin	unknown	unknown	gnl\|CDD\|227082
NZ_CP036550.1\|WP_005815842.1\|3681355_3682495_+\|CRISPR-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|273855

Protein	Function_ID	Function_description	E-value
NZ_CP036550.1\|WP_005787783.1\|3682514_3683354_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|274210	TIGR02580, putative_CRISPR-associated_protein, CRISPR type III-B/RAMP module RAMP protein Cmr4. This model represents a CRISPR-associated protein from the family that includes TM1792 of Thermotoga maritima. This family is part of the broad RAMP superfamily (pfam03787) collection of CRISPR-associated proteins. It is the fourth of a recurring set of six proteins, four of are in the RAMP superfamily, that we designate the CRISPR RAMP module.	1.13035e-40
NZ_CP036550.1\|WP_022348096.1\|3684743_3687014_+\|CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|275209	TIGR04416, hypothetical_protein, group II intron reverse transcriptase/maturase. Members of this protein family are multifunctional proteins encoded in most examples of bacterial group II introns. These group II introns are mobile selfish genetic elements, often with multiple highly identical copies per genome. Member proteins have an N-terminal reverse transcriptase (RNA-directed DNA polymerase) domain (pfam00078) followed by an RNA-binding maturase domain (pfam08388). Some members of this family may have an additional C-terminal DNA endonuclease domain that this model does not cover. A region of the group II intron ribozyme structure should be detectable nearby on the genome by Rfam model RF00029. [Mobile and extrachromosomal element functions, Other].	8.81514e-77
NZ_CP036550.1\|WP_032529217.1\|3679560_3681363_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	4.61967e-19
NZ_CP036550.1\|WP_032529219.1\|3683779_3684724_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|213662	TIGR01898, repair_system, CRISPR type III-B/RAMP module RAMP protein Cmr6. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family, represented by TM1791 of Thermotoga maritima, is designated Cmr6 [sic], for CRISPR/Cas Ramp Module protein 6. This family is both closely related to and frequently encoded next to the TM1792 family of Cas proteins described by TIGR01867. The two proteins are fused in an example from Methanopyrus kandleri.	2.46977e-19
NZ_CP036550.1\|WP_005787805.1\|3694402_3694786_+\|GtrA-family-protein	gnl\|CDD\|377229	pfam04138, GtrA, GtrA-like protein. Members of this family are predicted to be integral membrane proteins with three or four transmembrane spans. They are involved in the synthesis of cell surface polysaccharides. The GtrA family are a subset of this family. GtrA is predicted to be an integral membrane protein with 4 transmembrane spans. It is involved is in O antigen modification by Shigella flexneri bacteriophage X (SfX), but does not determine the specificity of glucosylation. Its function remains unknown, but it may play a role in translocation of undecaprenyl phosphate linked glucose (UndP-Glc) across the cytoplasmic membrane. Another member of this family is a DTDP-glucose-4-keto-6-deoxy-D-glucose reductase, which catalyzes the conversion of dTDP-4-keto-6-deoxy-D-glucose to dTDP-D-fucose, which is involved in the biosynthesis of the serotype-specific polysaccharide antigen of Actinobacillus actinomycetemcomitans Y4 (serotype b). This family also includes the teichoic acid glycosylation protein, GtcA, which is a serotype-specific protein in some Listeria innocua and monocytogenes strains. Its exact function is not known, but it is essential for decoration of cell wall teichoic acids with glucose and galactose.	3.57955e-18
NZ_CP036550.1\|WP_005787799.1\|3690100_3691285_-\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|99747	cd06454, KBL_like, KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.	6.57706e-152
NZ_CP036550.1\|WP_011202848.1\|3692644_3694402_+\|aspartate--tRNA-ligase	gnl\|CDD\|234775	PRK00476, aspS, aspartyl-tRNA synthetase; Validated.	0
NZ_CP036550.1\|WP_005787774.1\|3676181_3677657_+\|hypothetical-protein	gnl\|CDD\|213356	cd12822, TmCorA-like, Thermotoga maritima CorA-like family. This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	5.01953e-07
NZ_CP036550.1\|WP_011202849.1\|3695761_3696877_-\|agmatine-deiminase-family-protein	gnl\|CDD\|377332	pfam04371, PAD_porph, Porphyromonas-type peptidyl-arginine deiminase. Peptidyl-arginine deiminase (PAD) enzymes catalyze the deimination of the guanidino group from carboxy-terminal arginine residues of various peptides to produce ammonia. PAD from Porphyromonas gingivalis (PPAD) appears to be evolutionarily unrelated to mammalian PAD (pfam03068), which is a metalloenzyme. PPAD is thought to belong to the same superfamily as aminotransferase and arginine deiminase, and to form an alpha/beta propeller structure. This family has previously been named PPADH (Porphyromonas peptidyl-arginine deiminase homologs). The predicted catalytic residues in PPAD are Asp130, Asp187, His236, Asp238 and Cys351. These are absolutely conserved with the exception of Asp187 which is absent in two family members. PPAD is also able to catalyze the deimination of free L-arginine, but has primarily peptidyl-arginine specificity. It may have a FMN cofactor.	6.61804e-172
NZ_CP036550.1\|WP_005787793.1\|3687007_3687298_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	4.70103e-19
NZ_CP036550.1\|WP_005787816.1\|3698203_3698998_+\|ABC-transporter-permease	gnl\|CDD\|377092	pfam03649, UPF0014, Uncharacterized protein family (UPF0014).	2.50282e-82
NZ_CP036550.1\|WP_010993022.1\|3691519_3692563_+\|YegS/Rv2252/BmrU-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	1.1697e-54
NZ_CP036550.1\|WP_008660290.1\|3694865_3695750_-\|carbon-nitrogen-hydrolase	gnl\|CDD\|143597	cd07573, CPA, N-carbamoylputrescine amidohydrolase (CPA) (class 11 nitrilases). CPA (EC 3.5.1.53, also known as N-carbamoylputrescine amidase and carbamoylputrescine hydrolase) converts N-carbamoylputrescine to putrescine, a step in polyamine biosynthesis in plants and bacteria. This subgroup includes Arabidopsis thaliana CPA, also known as nitrilase-like 1 (NLP1), and Pseudomonas aeruginosa AguB. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 11. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer; P. aeruginosa AugB is a homohexamer, Arabidopsis thaliana NLP1 is a homooctomer.	3.14745e-169
NZ_CP036550.1\|WP_005803563.1\|3696957_3697485_-\|ferredoxin	gnl\|CDD\|227082	COG4739, COG4739, Uncharacterized protein containing a ferredoxin domain [Function unknown].	7.75537e-53
NZ_CP036550.1\|WP_005793776.1\|3697579_3698200_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	2.63209e-36
NZ_CP036550.1\|WP_005815842.1\|3681355_3682495_+\|CRISPR-associated-protein-Cmr3	gnl\|CDD\|273855	TIGR01888, Hypothetical_protein_SSO1730, CRISPR type III-B/RAMP module-associated protein Cmr3. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This highly divergent family is found in at least ten different archaeal and bacterial species as part of the CRISPR RAMP modulue but is not a member of the RAMP superfamily itself. A typical example is TM1793 from Thermotoga maritima.	1.86644e-12

>NZ_CP036550.1|WP_005787793.1|3687007_3687298_+|CRISPR-associated-endonuclease-Cas2
MVKAKKIFCVVAYDIQDDRSRIQISKILEKYGTRINYSVFECMFTDRQFQKIQINLERWINRRYDTVVYYPMCINCYTRIIYQPIRKKIIKTVEIV
>NZ_CP036550.1|WP_022348096.1|3684743_3687014_+|CRISPR-associated-endonuclease-Cas1
MPDYYHSITTLHALQNAWRAVRAKNAAGGIDGFTLSHFEKRLNDNLIELQHELISQTWNPEPYLRIEITKNETEKRKLGLLCIKDKIVQQAIKTAIEPQLEKTFLNLSYGYRPNKGPERAIKRVVHDLKKLKSGYVAKLDIDNYFDTINHERLFTRLANWLKDDETLRLIRLCIQTGIVTPQLQWQEINKGVPQGAILSPLLANFYLHPFDQFAANKVPMYIRYADDFLIATSTEKQIKEAVELVKEELESQFYLQLNTPIIHNFHDGIEFLGITISDTGLSITEKKKKTLQERINSIKFIKSSLSSQSKETLQGIKNYYAKLLPESTLKELDCFLMNRLNALIIRNQNSINNKKELVSNLQKIEFYSENSNKNKSQLIQQLCSTYIVHSTKSKTRLTSTHIDNTKLITQKKKEYQKRENEGAELVISIPGSYIGATYKGITVKLQGKIINKPSPALKHITVVGKGISLSSNAITYCMNHKIPIDFFDGRGKQYGTVLNPVFLDGTLWNKQVELPLEQKIKLATQIIIGKLKNQLNLIKYYHKYHKDILGGKLSEKYVEVVLKIDKLIEKAKNYSQRNEKYTAELMAIESQAAIAYWSYIRVLTADDGIDFIRREHQGATDLLNSLLNYGYAILYARVWKNILAAKLNPSIGVLHAKQDGKPTLVFDVVELFRAQMVDRVVISLIQKKVSLKMHDGLLNESSKRVLIRYILERLNRYEKYRGEEITFSQIILRQAQEIALFISGDNLIFKPYVAKW
>NZ_CP036550.1|WP_032529219.1|3683779_3684724_+|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MPKNYTLQNASNLGWLFYKDYYRQEPNVDFISTQGKESDTTADFFRKTNQRITAYQLNSESPLVAAFNNHFGTPLQLKTIYPGLITGSGLPHQTGSKGEFKLGFQFDYTIGLPYIPGSSIKGTLRSMFPFSLKDKGSTKRILPEYRKERMEYIRDLIIEVTNINEISDTEIQALEYAIFTNSTPSGKTIEFSLEEKDVFYDAFVADSKDGVMLSDDYITPHGENPLKDPKPILFLKIRPDVTINFYFKLCTTHLYKEKVCSSKQIEEIKKQNDFSSSDYKMITAHQKRNLFEKILLCIGIGAKTNIGYGQLKKL
>NZ_CP036550.1|WP_032529218.1|3683366_3683777_+|hypothetical-protein
MKISKKQIEYAIEALRANNIITNDNQYPKVFKGYISSFGAAVIQSGLIPAIIFFENEDNDANADRHKIIGVLKDIINAMRQQYTVTDATILVSSQIPANYSLAQYIIEHGNTDQLLKEITEAAVAMKLALRMYKSE
>NZ_CP036550.1|WP_005787783.1|3682514_3683354_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MTTRMYVINTLSNMHVGSGEVNYGVIDNLIQRDSVTNLPNINSSGLKGAIREYFKENENLVRELFGSAPKDEKTLPGKVRFFEANLLSMPVRSDKVPFLMATSDEVLQELITKMKFFNCEEATQYISHLSTLLDNIKTQAQGTDFAYVFDPSLQGAIIEEVSIRATCPSHIPLQLSLKKLLGDRLVILSHKYFSILSDDNHLPVLSRNNLENGQSANLWYEQVLPRYSRLYFMLMDGNAQSEYLKKFRDTLCTPSTIIQIGANASIGYGYCQISELSPF
>NZ_CP036550.1|WP_005815842.1|3681355_3682495_+|CRISPR-associated-protein-Cmr3
MNRHYLITLTPMDWFFFGGERTLDDGKSADYISHSNKFPQQSALLGMIRYQLLKQHNLLSQFPYTENKPTEKEIMKTLIGEQSFRMTERKAKSLGLGVIKQISPLMLIECKDDTSSRSIYFPLPLDDGYKVSFNETSNEDKVFYNGIECPIPNVYPASEEQDSGNQKRKFFDHKTYNNYLFWCTQGNNQIKKLLSDEIWISKMQIGITKHVEEGEDNDKSFYKQEFLQLKKSFIYAFYITLSGESELSSDIIQLGGQRSVFRMEVESIEENSDIQEKYQTAAQFLTQSDRLLILSPTYVDNLKELSALCNFMWSDSIVFRNIQTTNASNFYGKPIKSSSKYHFLKPGSVLYFKQGKRKEVEKLLMDYTYLRLSGYNIYI
>NZ_CP036550.1|WP_032529217.1|3679560_3681363_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MKYIAITLGPITRTIEMAESTKELWAASYFFSYLAKKIVEPFVKKNRTFQLPLINEEMQKPHCGAGLFPDRYIFKSEPGDLELLKQHSDQVLIEIAGHIASPSLPGTAKDVSQIYHYLKSYIKIYFIEHTLESDDPHVVIPACEKYLNIIENQETFPEQEETMISHQKSDFLKFLITNVNGKIYRKDKNSIPRFTGSFLTRDAFGDMNGERLFESILEISASELNINIQQKALEVITANEKNKGEKYSDQIWDAEEIILNDNKAQLRPYHKYIAIIKSDGDSMGETIKSMGAYNIPITQLSKALLSFNIESINEIVAYGGKPIFIGGDDLLCFAPVCCNGNNVFNLVEKLSTCFDQCINQHLQQYINACSEAQRPLPSLSFGISITYHKYPMFEALHTTDYLLEMVAKDNLFKYTLSNKNILNENMKRFILKNKLAFSLQKHSGQIYHTAMSKKGKSYVKFNMLLQKYILKNKDMSKTQESEKFLSSVIQMIRAHAEILQIILQNEDKRTEMLKNYFDNNFNESCHLGYTGLFEDIQTLLCLRYQENIQDYQNRNEIIQQNTILTSDEKEILIVSPAMDAIHTIFTALQFIHFINYNKDE
>NZ_CP036550.1|WP_137572667.1|3678146_3679556_+|hypothetical-protein
MNQLTAILKQHTPMIHFQHNESGATLRASEVKPLLDKFILTKLGNGDIREGRLYAKKNNWLIDNEKNYALNYKLSISLQKKSRLEYLITSSTFPLPTERPSNFFTIQNSPYFAQEKCVGINTNSTIILKKSNSAPRKKEAEFKEKNWSQIDKKGLEWQDFTIKIFSLKGDLINKIQTYLPAFFICHNFGTRNNKGFGSFTVEYINNQKNICNVEDTLKENFAFVYKKKIALSCQSTLDFIYIYNQIFSTIKKDYQILKSGYNFRNEYIKSLLFCYFVSKYPNYRWEKRKMKQLIKARGYELKGDHSPISGIRENDNSWNDPNPNGYNYAYIRAILGLAEQYEFQLETPYQKAIVKIKSANNCISRYKSPLLFKIINNSIYLVGNEINTEILNKPFQYSYIEQTKNKNMRTGKSEITERTMHINEIEMNYNNRINYHYTPTSFSLIDFMQYAMSYKKNGKNILNYIPLKQ
>NZ_CP036550.1|WP_005815846.1|3677653_3678133_+|hypothetical-protein
MNWKLVECEIALIVSLTVIECVNMGQNSPKDITCLTVFFCIMIVLLPLIGVLQQWHLSCFQNRQKEKEYQAKQETDEKMKTWLLAREAIIKDKEKEELTNKVNGLQQKCDSLIENQENELKKFYLSILSIIGTKDDLKSIEENFKKMKDFFEEYKKITK
>NZ_CP036550.1|WP_005787774.1|3676181_3677657_+|hypothetical-protein
MIYSYHIFYFPFKWEIMGLENQAFSDQVNLDNIQYNRNSHWERSQKPDPGEEESLYNEKNYYYTFVHNILYDEEHSPLNLIHHFERKEPKLSNHIYYYIKKKGRNNPYKLIVDAMNINLYATGVGFLSFYLKNEDCTQNSPEDILAINQYGRRIMPPFFNDTRLRNEISEYIRIEGLNQTVYFEDFKSYTPYDSWQPSSSIKKLICELVTNLSIDPIIDDRMFVATWYKNNQLSQQFTNNAKAYFDSQDPFSDYWYRFLFIDGSNATCQNEKMKKELLEEHTYYRWQQWSSLYGISKYSLVYLTNNEVPDYLIEYFQTIYARMAELVLVQRASMLRFSGEITKVSQLSNQDVEAVSKRVSSLYKEYIRFVNQIYFREITAQDQGIEMYNKLHSCLQMESYIKDLDGEIEELHQYISLMEDRERNKKASLLNDIATLFLPITVITGFWGMNQISEVMEENGELSTGFIIQSLLLIIGTLCAICIIYKRKRKL
>NZ_CP036550.1|WP_005787799.1|3690100_3691285_-|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MGLLQEKLAKYDLPQQIKAKGVYPYFRCIESEQNTEVIMSGRKVLMFGSNSYLGLTNHPKVIEAAVEATRKYGTGCAGSRFLNGTLDLHLQLEKELAEFVGKEDAIIYSTGFQVNLGVVSCVTGREDYVICDELDHASIVEGRRLSFSTILKFKHNDMESLEKELQKCRPDAVKLIVVDGVFSMEGDIANLPEIVRLSKKYDANIMVDEAHGLGVLGNHGRGTCDHFGLTKEVDLIMGTFSKSLAAIGGFIAADESIINYLRHNSRSYIFSASNTPAATAAARAALQIMKNEPERIEHLWDITNYSLKCFRELGFEIGHTSTPIIPLYVRDMEKTFMVTKMLFDEGVFVNPVVPPACSPNDTLIRFSLMATHSKEQIDFAIGKLVKCFKALDLL
>NZ_CP036550.1|WP_010993022.1|3691519_3692563_+|YegS/Rv2252/BmrU-family-lipid-kinase
MSENKKKIIFIVNPISGTQSKELVLSLLDEKIDKEMYTWEVVYTERAGHAIEIAADAADKNTDIVVAVGGDGTINEIARSLVHTNTALGIIPCGSGNGLARHLQISMDPRKALEILNDGIIDIIDYGKINGTDFFCTCGVGFDAFVSLKFANAGKRGLLTYLEKTLQESLKYQPETYELETEDGTSKYKAFLIACGNASQYGNNAYIAPQATLTDGLLDVTILEPFTVLDVPALAFQLFNKTIDQNSRIKTFRCKKLCIHRSSPGVVHFDGDPMQADEDIKIELIQKGLRVVVPGDKKKDNPNVLQKAQEYVNGIKLINEAIVEDIAHKNKVILKKNKQLIQKLTKK
>NZ_CP036550.1|WP_011202848.1|3692644_3694402_+|aspartate--tRNA-ligase
MFRTHTCGELRISDVNKQVKLSGWVQRSRKMGGMTFVDLRDRYGITQLVFNEEIDAELCERANKLGREFVIQIVGTVNERFSKNSHIPTGDIEIIVSELNILNSAITPPFTIEDNTDGGDDIRMKYRYLDLRRSAVRSNLELRHKMTIEVRSYLDKLGFLEVETPVLIGSTPEGARDFVVPSRMNPGQFYALPQSPQTLKQLLMVSGFDRYFQIAKCFRDEDLRADRQPEFTQIDCEMSFVEQEDVITTFEGMAKHLFKVIRNIELTGPFPRMPWSEAMRLYGSDKPDIRFGMQFVELMDILKGHGFSVFDNATYIGGICAEGAAGYTRKQLDALTEFVKKPQIGAKGMVYARIEADGTVKSSVDKFYIQEVLQQLKEAFGAKPGDLILILSGDDAMKTRKQLCELRLEMGNQLGLRDKNTFACLWVVDFPLFEWSEEEGRLMAMHHPFTSPKPEDIHLLDTNPAAVRANAYDMVINGVEVGGGSIRIHDSQLQNKMFELLGFTPERAQEQFGFLMNAFKFGAPPHGGLAYGLDRWVSLFAGLDSIRDCIAFPKNNSGRDVMLDAPAALDPSQLEELNLIVDIKE
>NZ_CP036550.1|WP_005787805.1|3694402_3694786_+|GtrA-family-protein
MKESVRIFRFAVIGTLNALITAFVIWLMMDELSYDYIPANITAYIVAQIHNFIWSKYWIFPIENKKNNIWKQMLFFCSAFGLAYSAQFLFLVTLVECGDVNEYLAQFLGLFIYGTVNFIVNKKLTFR
>NZ_CP036550.1|WP_008660290.1|3694865_3695750_-|carbon-nitrogen-hydrolase
MRKIKVGIIQQANTSDIRINLMNLAKSIEACAANGAQLVVLQELHNSLYFCQTENTDLFELAEPIPGPSTGFYSELAAANRIVLVTSLFEKRAPGLYHNTAVVFDRDGSIAGKYRKMHIPDDPAYYEKFYFTPGDIGFEPIQTSLGKLGVLVCWDQWYPEAARLMALKGAEILIYPTAIGWESTDTDDEKKRQLNAWIISQRAHAVANGLPVISVNRVGHEPDPSGQTNGILFWGNSFVAGPQGEYLAQAGNDRSENMIVEVDLERSENVRRWWPFLRDRRIDEYGNLTKRFID
>NZ_CP036550.1|WP_011202849.1|3695761_3696877_-|agmatine-deiminase-family-protein
MGIMVGLPTSGGTEKDLQLNFGLTVNDQVEMLAPFLPAEWFLQSGIQLTWPHAGTDWAYMLAEVQECFINIAREIAKRELLLIVTPYPEEVRKQIIGTVNMDNVRFLKCDTNDTWARDHGAITLMDTGGASLLDFTFNGWGEKFEARLDNQITRRAVEAGALKGQYKDCLNFVLEGGSIESDGVGTLLTTSECLLSPHRNSPMNRVDIEEYLCRVFHLQRVLWLDHGYLSGDDTDSHIDTLARFCSPDTIAYVKCTDSEDEHYEALCKMEEQLKTFRTTSGAPYRLLALPMADKIEVEGERLPATYANFLIMNDVVLYPTYNQPENDKLAKEVLCEAFPTYEVVGIDCRALIKQHGSLHCVTMQYPTGVIK
>NZ_CP036550.1|WP_005803563.1|3696957_3697485_-|ferredoxin
MILNERDSRHEHVLNVARQMMTAARTAPKGKGIDIIETAIVTGEEIQQLSDTLKAMFEEFGMKFFLRDADNILQAECILLIGTREQAQGLNCGHCGYATCSGRSEGVPCALNSIDVGIAIGSACATAADLRVDTRVMFSAGLAAQRLEWLKGCHQVMAIPVSASSKNPFFDRKPK
>NZ_CP036550.1|WP_005793776.1|3697579_3698200_+|ATP-binding-cassette-domain-containing-protein
MLQIDNACIAFGEDILFSEFCMRLNKGETACIAGQSGRGKTSLLNAIMGFVPLRKGKIKVGGILLEPTTIDAIRRHIAWIPQELALPSEWVKEMISLPFALKANRHISFSEEKLFTCFDELGLDKELYQKRVGEISGGQRQRIMIAVAAMLEKPLIIVDEPTSALDAGSTDKVLAFFRNQAEKGTAILAVSHDRTFAYGCNQLITL
>NZ_CP036550.1|WP_005787816.1|3698203_3698998_+|ABC-transporter-permease
MGTIDISYFNLLIGLLLLVIPLFYLWKFKTGLLKATLIGTARMIVQLFLIGMYLKYLFLWNNPWINFLWVIIMIFVAGQTALVRTGLKREILLIPISVGFLCSVVLVGMYFIGIVLQLDNVFSAQYFIPIFGILMGNMLSSNVIALNTYYSGLKREQQLYCYLLGNGATRQEAQAPFIREAIIKSFSPLIANIAVMGLVALPGTMIGQILGGSSPNVAIKYQMMIMVITFTASMLSLMITISLASRKSFDEYGRILQVTKESQK
>NZ_CP036550.1|WP_005815829.1|3699005_3699278_+|hypothetical-protein
MTSTDSILQLISEIHIPGFFITVDFLQIGEAIPQGISGFLKEKYDKISHGASGRKFIYQESGWRMAFTFYPTDRVVDEKYAMKNKMIKKR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	BK010646	TPA_exp: Bacteroides phage p00, complete sequence	36771-36800	0	1.0
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	JQ680371	Unidentified phage clone 2207_scaffold314 genomic sequence	2824-2853	0	1.0
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	JQ680363	Unidentified phage clone 2020_scaffold1264 genomic sequence	6033-6062	0	1.0
NZ_CP036550_1	1.1\|357413\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357413-357442	30	MN694251	Marine virus AFVG_250M445, complete genome	2134-2163	6	0.8
NZ_CP036550_1	1.3\|357567\|29\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357567-357595	29	NZ_CP017565	Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence	248647-248675	6	0.793
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	NC_023286	Streptomyces sp. F12 plasmid pFRL6, complete sequence	73223-73252	6	0.8
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	NZ_CP040762	Paracoccus sp. 2251 plasmid unnamed2, complete sequence	177185-177214	7	0.767
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	NZ_CP029358	Azospirillum sp. CFH 70021 plasmid unnamed3	402022-402051	8	0.733
NZ_CP036550_2	2.4\|3687991\|36\|NZ_CP036550\|PILER-CR,CRISPRCasFinder,CRT	3687991-3688026	36	MF417875	Uncultured Caudovirales phage clone 10S_11, partial genome	42764-42799	8	0.778
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	BK010646	TPA_exp: Bacteroides phage p00, complete sequence	13936-13965	9	0.7
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	NZ_CP051517	Paraburkholderia aromaticivorans strain AR20-38 plasmid unnamed1	98227-98256	9	0.7
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	NZ_KJ909292	Aeromonas salmonicida subsp. salmonicida strain 2009-144K3 plasmid pAB5S9b, complete sequence	19739-19768	9	0.7
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	NZ_BK008853	Aeromonas bestiarum strain 5S9 plasmid pAb5S9, complete sequence	18915-18944	9	0.7
NZ_CP036550_1	1.4\|357643\|30\|NZ_CP036550\|PILER-CR,CRISPRCasFinder	357643-357672	30	NC_009476	Aeromonas bestiarum 5S9 plasmid pAb5S9, complete sequence	20932-20961	9	0.7
NZ_CP036550_2	2.7\|3688204\|35\|NZ_CP036550\|PILER-CR,CRISPRCasFinder,CRT	3688204-3688238	35	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	296308-296342	9	0.743
NZ_CP036550_2	2.6\|3688132\|37\|NZ_CP036550\|PILER-CR,CRISPRCasFinder,CRT	3688132-3688168	37	NC_007103	Bacillus cereus E33L plasmid pE33L466, complete sequence	9904-9940	10	0.73
NZ_CP036550_2	2.6\|3688132\|37\|NZ_CP036550\|PILER-CR,CRISPRCasFinder,CRT	3688132-3688168	37	NZ_CP009967	Bacillus cereus E33L plasmid pBCO_1, complete sequence	312233-312269	10	0.73
NZ_CP036550_2	2.6\|3688132\|37\|NZ_CP036550\|PILER-CR,CRISPRCasFinder,CRT	3688132-3688168	37	NC_019749	Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.02, complete sequence	82001-82037	12	0.676

1. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to BK010646 (TPA_exp: Bacteroides phage p00, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
ttgttgctgtccgtgtcgtccagcgggtag	Protospacer
******************************

2. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to JQ680371 (Unidentified phage clone 2207_scaffold314 genomic sequence) position: , mismatch: 0, identity: 1.0

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
ttgttgctgtccgtgtcgtccagcgggtag	Protospacer
******************************

3. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to JQ680363 (Unidentified phage clone 2020_scaffold1264 genomic sequence) position: , mismatch: 0, identity: 1.0

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
ttgttgctgtccgtgtcgtccagcgggtag	Protospacer
******************************

4. spacer 1.1|357413|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to MN694251 (Marine virus AFVG_250M445, complete genome) position: , mismatch: 6, identity: 0.8

gattcgaagatatgcaaatgtagcaagtat	CRISPR spacer
aattgacagataagcaaatggagcaagtat	Protospacer
.*** . ***** ******* *********

5. spacer 1.3|357567|29|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to NZ_CP017565 (Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence) position: , mismatch: 6, identity: 0.793

gatcgtgtttgcggagcattaccaagagg	CRISPR spacer
aagcgtgtttgcggagcactacaaagtcg	Protospacer
.* ***************.*** ***  *

6. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to NC_023286 (Streptomyces sp. F12 plasmid pFRL6, complete sequence) position: , mismatch: 6, identity: 0.8

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
gtggcgctgtccgtgtcgtcgagctggtgg	Protospacer
 ** .*************** *** ***.*

7. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to NZ_CP040762 (Paracoccus sp. 2251 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
ccggcgcggtccgtgtcgtccagcggctgg	Protospacer
..* .** ****************** *.*

8. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to NZ_CP029358 (Azospirillum sp. CFH 70021 plasmid unnamed3) position: , mismatch: 8, identity: 0.733

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
gacttgctgtcggtgacgtccagcggcacg	Protospacer
   ******** *** **********   *

9. spacer 2.4|3687991|36|NZ_CP036550|PILER-CR,CRISPRCasFinder,CRT matches to MF417875 (Uncultured Caudovirales phage clone 10S_11, partial genome) position: , mismatch: 8, identity: 0.778

gctttttcattttttaataattttaagtgttataaa--	CRISPR spacer
cctttttcatattttaataaatttaa--gctatgattt	Protospacer
 ********* ********* *****  *.***.*

10. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to BK010646 (TPA_exp: Bacteroides phage p00, complete sequence) position: , mismatch: 9, identity: 0.7

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
ccggtgctgtccgcgtcgtccagcgccctc	Protospacer
..* *********.***********  .

11. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to NZ_CP051517 (Paraburkholderia aromaticivorans strain AR20-38 plasmid unnamed1) position: , mismatch: 9, identity: 0.7

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
ttgttgttctccgtgtcgtccaggaaagcc	Protospacer
******.* ************** ...

12. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to NZ_KJ909292 (Aeromonas salmonicida subsp. salmonicida strain 2009-144K3 plasmid pAB5S9b, complete sequence) position: , mismatch: 9, identity: 0.7

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
gcttttctgtccgtgtcgtccagctcatgc	Protospacer
 . ** ******************  .*.

13. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to NZ_BK008853 (Aeromonas bestiarum strain 5S9 plasmid pAb5S9, complete sequence) position: , mismatch: 9, identity: 0.7

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
gcttttctgtccgtgtcgtccagctcatgc	Protospacer
 . ** ******************  .*.

14. spacer 1.4|357643|30|NZ_CP036550|PILER-CR,CRISPRCasFinder matches to NC_009476 (Aeromonas bestiarum 5S9 plasmid pAb5S9, complete sequence) position: , mismatch: 9, identity: 0.7

ttgttgctgtccgtgtcgtccagcgggtag	CRISPR spacer
gcttttctgtccgtgtcgtccagctcatgc	Protospacer
 . ** ******************  .*.

15. spacer 2.7|3688204|35|NZ_CP036550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 9, identity: 0.743

aaaattaataaataaacttccatagcttttatttt	CRISPR spacer
acatcatctaaaaaaacttccatagcttttctttg	Protospacer
* * .   **** ***************** ***

16. spacer 2.6|3688132|37|NZ_CP036550|PILER-CR,CRISPRCasFinder,CRT matches to NC_007103 (Bacillus cereus E33L plasmid pE33L466, complete sequence) position: , mismatch: 10, identity: 0.73

aactcttaaattatttaattcaatttctttttccacc	CRISPR spacer
gattatataattatttaattctttttctttttcctta	Protospacer
.*.* *  *************  *********** .

17. spacer 2.6|3688132|37|NZ_CP036550|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009967 (Bacillus cereus E33L plasmid pBCO_1, complete sequence) position: , mismatch: 10, identity: 0.73

aactcttaaattatttaattcaatttctttttccacc	CRISPR spacer
gattatataattatttaattctttttctttttcctta	Protospacer
.*.* *  *************  *********** .

18. spacer 2.6|3688132|37|NZ_CP036550|PILER-CR,CRISPRCasFinder,CRT matches to NC_019749 (Stanieria cyanosphaera PCC 7437 plasmid pSTA7437.02, complete sequence) position: , mismatch: 12, identity: 0.676

aactcttaaattatttaattcaatttctttttccacc	CRISPR spacer
ttcttttaaattatttaattcactttctgtaagagta	Protospacer
  **.***************** ***** *    ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

591582 : 663329

Catovirus(14.29%)

tRNA,transposase,protease,integrase,holin

attL 581988:582004|attR 665949:665965

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
581988:582004	attL	NA	NA	NA	NA
WP_005822344.1\|591582_592209_-\|holin	LPS cholinephosphotransferase	A0A1V0SAS8	Catovirus	1.0e-08	40.0
WP_032529527.1\|592205_594011_-	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_032529528.1\|594147_595371_-	TIGR04150 pseudo-rSAM protein	NA	NA	NA	NA
WP_005803960.1\|595367_596837_-	radical SAM peptide maturase	NA	NA	NA	NA
WP_029327251.1\|596833_598075_-	6-bladed beta-propeller	NA	NA	NA	NA
WP_005803957.1\|598186_598438_-	rSAM-modified peptide	NA	NA	NA	NA
WP_005803955.1\|598640_599858_-	TIGR04157 family glycosyltransferase	NA	NA	NA	NA
WP_005803953.1\|599864_600572_-	hypothetical protein	NA	NA	NA	NA
WP_032529203.1\|600927_602277_+	glycosyltransferase family 8 protein	NA	NA	NA	NA
WP_032529204.1\|602337_603453_-	6-bladed beta-propeller	NA	NA	NA	NA
WP_032529205.1\|604744_605995_-	6-bladed beta-propeller	NA	NA	NA	NA
WP_032529206.1\|606179_607484_-	6-bladed beta-propeller	NA	NA	NA	NA
WP_032588750.1\|607537_608845_-	6-bladed beta-propeller	NA	NA	NA	NA
WP_005791209.1\|609015_609375_-	LytTR family transcriptional regulator	NA	NA	NA	NA
WP_011203687.1\|609436_609682_-	hypothetical protein	NA	NA	NA	NA
WP_032529368.1\|609731_610919_-	DUF4934 domain-containing protein	NA	NA	NA	NA
WP_080713742.1\|611086_612262_-	DUF4221 family protein	NA	NA	NA	NA
WP_077687828.1\|612802_613009_-	hypothetical protein	NA	NA	NA	NA
WP_008661581.1\|613113_614772_-	6-bladed beta-propeller	NA	NA	NA	NA
WP_005792215.1\|614968_615493_+	NUDIX domain-containing protein	NA	NA	NA	NA
WP_005791196.1\|615532_618541_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_005791194.1\|618547_620251_+	TonB-dependent receptor	NA	NA	NA	NA
WP_008770105.1\|620529_622875_+	type I DNA topoisomerase	A0A1V0SCS0	Indivirus	9.6e-145	40.7
WP_032529366.1\|623046_624021_+	DUF4842 domain-containing protein	NA	NA	NA	NA
WP_005803924.1\|624206_626000_-\|tRNA	arginine--tRNA ligase	A0A2I2L3K1	Orpheovirus	9.9e-49	29.3
WP_005791188.1\|626087_626360_-	HU family DNA-binding protein	A4JWM7	Burkholderia_virus	6.8e-18	55.6
WP_005791187.1\|626607_627282_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_005791185.1\|627262_628162_+\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_005791183.1\|628165_629263_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_032529365.1\|629427_629895_+	hypothetical protein	NA	NA	NA	NA
WP_009293084.1\|630074_633098_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	3.0e-29	31.8
WP_005791180.1\|633398_633689_-	HU family DNA-binding protein	A3E2K9	Sodalis_phage	2.2e-11	42.7
WP_032529364.1\|633729_638253_-	hypothetical protein	NA	NA	NA	NA
WP_032529363.1\|638289_641421_-	hypothetical protein	NA	NA	NA	NA
WP_032529362.1\|641692_642676_-	FimB/Mfa2 family fimbrial subunit	NA	NA	NA	NA
WP_032529361.1\|642758_643823_-	hypothetical protein	NA	NA	NA	NA
WP_077687830.1\|643902_645564_-	hypothetical protein	NA	NA	NA	NA
WP_005791170.1\|645651_646212_-	DUF3575 domain-containing protein	NA	NA	NA	NA
WP_008770336.1\|646397_646592_+	hypothetical protein	NA	NA	NA	NA
WP_005791978.1\|646594_647482_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_057058805.1\|647728_648937_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_011203698.1\|648999_649230_-	hypothetical protein	NA	NA	NA	NA
WP_005791976.1\|649933_651784_+	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_005791975.1\|651787_652798_+	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_032529360.1\|653036_654641_-	hypothetical protein	NA	NA	NA	NA
WP_032529371.1\|654997_656221_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	4.7e-26	28.6
WP_032529359.1\|656217_656607_+	hypothetical protein	NA	NA	NA	NA
WP_032529358.1\|656882_658088_+	helicase	NA	NA	NA	NA
WP_032529357.1\|658363_659302_+	DNA primase	NA	NA	NA	NA
WP_032529356.1\|659470_659833_+	MobC family plasmid mobilization relaxosome protein	NA	NA	NA	NA
WP_032529355.1\|659829_660771_+	relaxase/mobilization nuclease domain-containing protein	NA	NA	NA	NA
WP_080713743.1\|660819_661527_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_137572646.1\|661591_661798_-	hypothetical protein	NA	NA	NA	NA
WP_137572647.1\|661847_662030_-	hypothetical protein	NA	NA	NA	NA
WP_005805709.1\|662042_663329_-\|transposase	IS1380-like element IS613 family transposase	NA	NA	NA	NA
665949:665965	attR	NA	NA	NA	NA

DBSCAN-SWA_2

3112572 : 3186120

unidentified_phage(28.57%)

protease,integrase

attL 3160928:3160941|attR 3186276:3186289

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_008659778.1\|3112572_3115056_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	6.3e-102	33.0
WP_005787102.1\|3115068_3116448_-	type VI secretion system contractile sheath protein TssC	NA	NA	NA	NA
WP_005787103.1\|3116463_3116913_-	hypothetical protein	NA	NA	NA	NA
WP_005787106.1\|3117002_3117392_-	hypothetical protein	NA	NA	NA	NA
WP_005787112.1\|3117832_3118576_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_080690188.1\|3118735_3118912_+	hypothetical protein	NA	NA	NA	NA
WP_008659781.1\|3118920_3120192_+	pyridoxal phosphate-dependent aminotransferase family protein	D2TEZ5	Emiliania_huxleyi_virus	1.7e-39	30.3
WP_032529568.1\|3120413_3123488_-	ATP-binding protein	NA	NA	NA	NA
WP_005794648.1\|3123516_3123702_-	4-oxalocrotonate tautomerase	NA	NA	NA	NA
WP_008768480.1\|3123872_3124037_+	hypothetical protein	NA	NA	NA	NA
WP_008659784.1\|3124033_3124333_+	hypothetical protein	NA	NA	NA	NA
WP_008659785.1\|3124908_3125253_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_032529569.1\|3125236_3127282_+	bifunctional DNA primase/helicase	NA	NA	NA	NA
WP_005643639.1\|3127294_3127648_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_014298755.1\|3128824_3129556_+	DUF3800 domain-containing protein	Q71TB8	Escherichia_phage	5.6e-35	36.9
WP_014298756.1\|3129614_3130079_+	hypothetical protein	NA	NA	NA	NA
WP_032497403.1\|3130350_3130491_-	hypothetical protein	NA	NA	NA	NA
WP_032497469.1\|3131851_3132841_+	hypothetical protein	NA	NA	NA	NA
WP_137572665.1\|3134018_3134699_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_032497471.1\|3137533_3138328_+	hypothetical protein	NA	NA	NA	NA
WP_032529570.1\|3138439_3139120_+	hypothetical protein	NA	NA	NA	NA
WP_008659817.1\|3139202_3139394_+	hypothetical protein	NA	NA	NA	NA
WP_008659818.1\|3139406_3140357_+	hypothetical protein	NA	NA	NA	NA
WP_008659819.1\|3140353_3140734_+	hypothetical protein	NA	NA	NA	NA
WP_032575858.1\|3140783_3141830_+	hypothetical protein	NA	NA	NA	NA
WP_008659820.1\|3141834_3142737_+	hypothetical protein	NA	NA	NA	NA
WP_008659821.1\|3142753_3143662_+	hypothetical protein	NA	NA	NA	NA
WP_008659823.1\|3143907_3144588_+	hypothetical protein	NA	NA	NA	NA
WP_008659825.1\|3144977_3145925_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_008659827.1\|3146065_3147187_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_008659829.1\|3147359_3148154_+	hypothetical protein	NA	NA	NA	NA
WP_008659830.1\|3148398_3148770_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_008659831.1\|3148772_3149795_+	AAA family ATPase	NA	NA	NA	NA
WP_008659834.1\|3153002_3157226_+	hypothetical protein	NA	NA	NA	NA
WP_008659836.1\|3157233_3159027_+	AAA family ATPase	NA	NA	NA	NA
WP_008659841.1\|3160650_3160932_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
3160928:3160941	attL	NA	NA	NA	NA
WP_008659843.1\|3161249_3162425_-\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.0e-46	34.3
WP_005800293.1\|3163027_3163648_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_005817965.1\|3163806_3164721_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_121971863.1\|3164716_3164803_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_008659845.1\|3165014_3165602_+	hypothetical protein	NA	NA	NA	NA
WP_022347520.1\|3165699_3166551_+	hypothetical protein	NA	NA	NA	NA
WP_080713730.1\|3166575_3167049_+	hypothetical protein	NA	NA	NA	NA
WP_008659851.1\|3167091_3167559_+	hypothetical protein	NA	NA	NA	NA
WP_005800283.1\|3167602_3168034_+	hypothetical protein	NA	NA	NA	NA
WP_011202669.1\|3168257_3168710_+	hypothetical protein	NA	NA	NA	NA
WP_005787146.1\|3168800_3169589_+	DUF1266 domain-containing protein	NA	NA	NA	NA
WP_011202670.1\|3169650_3169896_+	hypothetical protein	NA	NA	NA	NA
WP_032529274.1\|3171475_3176734_+	DEAD/DEAH box helicase	A0A1B1IUF6	uncultured_Mediterranean_phage	3.7e-59	21.8
WP_008659858.1\|3176735_3179660_+	DEAD/DEAH box helicase family protein	A0A1B1IUI1	uncultured_Mediterranean_phage	8.3e-37	26.5
WP_137572674.1\|3182435_3183641_+	hypothetical protein	NA	NA	NA	NA
WP_032529190.1\|3184962_3186120_+\|integrase	site-specific integrase	H7BUI8	unidentified_phage	1.7e-22	30.0
3186276:3186289	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr_ID: NZ_CP036550.1|WP_002560961.1|2739497_2739914_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP036550.1|WP_002560961.1|2739497_2739914_+|hypothetical-protein

2739497_2739914_+

138 aa aa

hit_Aca_id	identity	query_coverage	hit_coverage
gnl\|BL_ORD_ID\|40	0.5571428571428572	0.9855072463768116	0.9929078014184397

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP036550

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information