Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NZ_CP008849 | Alteromonas australica strain H 17, complete genome | 1 crisprs | RT,cas3,DEDDh,WYL,Cas9_archaeal,csa3,DinG | 0 | 0 | 0 | 0 |
1. NZ_CP008849
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_CP008849_1 | 2719672-2719768 | Orphan |
NA
Consensus repeat of NZ_CP008849_1
|
1 spacers
spacers of NZ_CP008849_1
>1.1|2719700|41|NZ_CP008849|CRISPRCasFinder CGTTAATGCTCGTTATTGCTGTGCCTGTCTCGAAACAAGTG |
CRISPR arrays and Neighbor proteins around NZ_CP008849_1
The CRISPR arrays of NZ_CP008849_1 >merge|NZ_CP008849|1|2719672-2719768|CRISPRCasFinder TTATAAGAGACACGAGAAGTGCCTGTCACGTTAATGCTCGTTATTGCTGTGCCTGTCTCGAAACAAGTGTTATAAGAGACACGAGAAGTGCCTGTCA >NZ_CP008849|1|1|2719672-2719768|CRISPRCasFinder TTATAAGAGACACGAGAAGTGCCTGTCA CGTTAATGCTCGTTATTGCTGTGCCTGTCTCGAAACAAGTG TTATAAGAGACACGAGAAGTGCCTGTCA
>NZ_CP008849.1|WP_044057498.1|2718645_2719572_-|hypothetical-protein MPQPRKSLICLESTPYYHCVSRCVRRAYLCGVDELTGKCYEHRRQVIEDRALKLSTSFAIDICAFAIMSNHTHLVLHVNKAKALALNNDEVLARWHRFHKGTVLSRRYVDTKQRHTLSEAELKSVEALVKVYRQRLYSISWFMRLLNEYIARMANKEDECTGHFWEGRFKSQALLDEAALLACMAYVDLNPIRAGVAKTLETSPHTSIKRRIKAVKNNVQPKKLMPFIGSRERTHIGLRFELKDYLQLVDDTGRSIRQDKPGSISANSEPILTRAGLTEVSWQLMVNTIETQFSTSVSASILEHKKCA >NZ_CP008849.1|WP_044057497.1|2717373_2718219_-|formate/nitrite-transporter-family-protein MTEKSQQSKDREKDVALSHTEEQDVRDNQSLNSVSLYAIVHREGLEELQRPVMSLWWSGVAAGIGISLSILAEGILHHLFEDSQYQFVIENLGYTVGFVLVIVGRLQLFTENTLSVILPLLSKPSVNMTLCIARLWLIVFAANMVGTFLAAVFSYTLQAVPPELVEGMTAISKHYAEFSASEAFSYGITSGFIIAAIVWMKPSVKHSQVLMIVIFTYLIAIGNFTHVIAGSTELFLLVLQGHISAAETVALIGATLMGNIVGGTGLFALLAYGQVVREIER >NZ_CP008849.1|WP_052364383.1|2716106_2717057_+|LysR-family-transcriptional-regulator MDKRLKWLNNLLCFEVAARNESYSKAAKELHISQAAVSQQMRQLEANLGISLFRRQGRKMLLTAPGRTLLASCKNGFSEIINGLNQVQEEPIEGSLTISSTQAFCALWLMPNLFAFFNLFPDINVNIQASNRIENLHDGNIDVAIRFSTSTTSLLDDTLVVEKFAEDGVIPACSPEFQSKMQLKTVKDLLNARLLSLACEEKANWENYFENDKIDLSNTVLNKTTVSSSDLALSAALAGQGVMLAGDFMIRQYLNSGQLVIPVAKPHPVRWKYHFVYLKNSPKQQRIAHFCDWLKKQMTANEVKLSSKELHYLVTQ >NZ_CP008849.1|WP_044057495.1|2714941_2715559_+|bifunctional-phosphoribosyl-AMP-cyclohydrolase/phosphoribosyl-ATP-diphosphatase-HisIE MIITNENSNKLAWDKMDNLLPAIVQDALSGKVLMQGYMDQDALTKTLETGKVTFFSRSKQRLWTKGETSGHTLDLMSVACDCDQDSLLVLANPNGPTCHTGAESCWFEGNTPAFTFLADLERVLADRKDADPKSSYTASLYNKGIKRIAQKVGEEGVETALAATVHDKEELKNEAADLLYHLTVLLQASDMSLNDALNVLRERHK >NZ_CP008849.1|WP_044057494.1|2714132_2714945_+|imidazole-glycerol-phosphate-synthase-subunit-HisF MLAKRIIPCLDVRDGKVVKGVQFRNHEIIGDIVPLAEQYAKAGADELVFYDITASSDARVVDKSWVSRIAQVIDIPFCVAGGIKSIEDAGRILEMGADKISINSPALSNPELINALHDVYGQQCVVIGIDSFYNEATDQYEVYKFTGDENRTQKSQWQTIDWIKEVQSRGAGEIVLNCMNQDGVRKGYDVKQLKAVRDVCEVPLIASGGAGEIAHFTDVFQQADVDGALAASVFHKGIINIDELKAELTSNGIAMRKRHGLTAQAEGVNP >NZ_CP008849.1|WP_044057493.1|2713413_2714151_+|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase MIIPAIDLIDGHVVRLYQGDYKQKTQYELDPVDVVHDYADQGATWLHIVDLTGAKDTSKRQLELIKAMVDTKRMQFQAGGGIRSEEEVAQLLETGVSRVVIGSLAVKQPELVKSWVEKYSPERIVLALDINISESGEKLIATHGWQENSGVALEGLLEDFGTVGAKHVLCTDISRDGTLQGANTELYQEMAARFPNVSWQASGGIGSINDIETLKPTNVAGVILGRALLEGKFTVKEAIACWQNA >NZ_CP008849.1|WP_044057492.1|2712772_2713414_+|imidazole-glycerol-phosphate-synthase-subunit-HisH MSVVNTSQRQKIVIVNTGCANISSVRFALERLGVEVDVSDDVKVIKSADKVFLPGVGTATAAMASIKQKALVDALQTLTQPVLGVCLGMQLMVETSAEGGFQGTGNIECLNLMPGHVARMESKGVRLPHMGWNTVSHNSEHKEESLFKGIPQDTYFYFVHSFAVPEYEHTLASCTYGNTFSAAINKNNFYGVQFHPERSGEAGAQLLTNFVNL >NZ_CP008849.1|WP_044057491.1|2711702_2712773_+|bifunctional-histidinol-phosphatase/imidazoleglycerol-phosphate-dehydratase-HisB MSQQAILFIDRDGTLVEEPPVDKQLDSLEKLVFEPNVIPVLLKLKAAGYKLVMVSNQDGLGTDSFPQEDFDKPHNAMMAIFESQGVTFDDVLICPHFDEDNCTCRKPKLGLVKDYLQQGKVDFTRSFVIGDRITDVQLAENMGIRSFQYHRESLNWNDIQKSLLASSRIAEVVRTTSETDIKVRVDLDSQAKSTIQTGLGFFDHMLDQIATHGGFELNVTVDGDLHIDDHHSVEDTALALGEALKKALGDKRGIGRFGFALPMDECRAECIMDISNRPYLKFDAEFSRDKVGEMATEMVPHFFYSLAQSMGLSLHLSTSEGNAHHQVESLYKVFGRALRQAITRQGDALPSSKGAL >NZ_CP008849.1|WP_044057490.1|2710629_2711706_+|histidinol-phosphate-transaminase MSKLIDTLINENLVPLKPYESARRLFSGGQDWLNANESPFANEYHVDSSNFNRYPSCQPTGVVEGYANYSGLDASNVLITRGADEGIELLIRTFCTPGKDNILICPPTYGMYAISAETCDVGVKKVALNDDFSLNVNAICAEEDVNIIFICAPNNPTGTSVAREDIKTVLEHFADTALVVVDEAYIEFDASNTWATEIANYTNLVVLRTLSKAFALAGLRCGFTLAQEPVIQALLKVIAPYPIPEPVAQIAANALSSDSLALIALQVDTINREKEALAESLAAIEGFTLVGDRKANFILFRYAKSAELMQFLVSRGMLIRDQSKQLNLQNCLRVTIGTEEQNQRLMQLINEFLNEDAA >NZ_CP008849.1|WP_044057489.1|2709322_2710630_+|histidinol-dehydrogenase MITWSSLSSDEKKQALARPAMANSQQLKQTVSDIIAKVETSGDEAVLDYTRTFDCPDLQSLILSQENIDALAAQVTPEVAAAIDTAFNNIKQFHEAQSPTDIALTTTPGVDCELRFTALDAVGLYIPGGSAPLPSTVLMLGVPALVAGCENKLLCTPPNKAQLIAPEIAYAARKCGIDKIFLCGGAQAIAAMALGTQTIPQVDKIFGPGNSFVTEAKQQVSQRADGAAIDMPAGPSEVLVLADALADAEFVAADLLSQAEHGPDSQAILVSDDATLIANAKAAVERQLATLSRAEIARPAMENARYILAGSIEEAIEVSNAYAPEHLIVQIEDARRYLSKIKYAGSIFLGPWSPESAGDYASGTNHVLPTYGYAKNYSSLGLLDFMRRFTIQELSADGMRNLGPAIMALANAEGLDAHEQAVALRMKKLGFGGNA >NZ_CP008849.1|WP_044057499.1|2720040_2722653_+|TonB-dependent-receptor MKLFPISALAGAVIFSLPNSLSAQEANSEIADTFSEEAEQIVILGSRRPGRSVVESNVPIDLIGEDTLQAGGFTDISRQLQNVVPSFNYYQPSLVDGTEHIKPASLRGLAPDQTLVLLNGRRFHSSAILNLNGTAGRGSVSVDLNAIPSAAIKRVEILRDGAAAQYGSDAIAGVINIITKDDSEGGAISVSGGSYYTTVDGVPELVGVQVDDTGAVVGNGSSRVAGVYGDDISRNDGENYTISGNWGLQLSSDGYVNISAEYAHANRTSRGGYDDGDTYPKNEDGSFDLREIDADRDRFYYGLPETESYTLLGSAGYVFNNGIEAYSTVTFQDKDSLSGAFYREASDEALLIQEIYPDGFTPRILAEIKDYSVLAGIKGSADIWDYNASVVTGKNTVDYTTSNTANATYLLDTPTRFYGGELASTQTTLSFDASRYIDLDSLYSPISFAMGIEYRQDAFQITAGDEEAYTNRQMTDESGNPIFDESGNPVYPTNSLFAQGAIYFSDAAEVDEDRHAYAFYVDVDSDITEAWNIALAGRFEDYSDFGTTLNGKIATRYTFNDGFALRGSISSGFRAPSLQQQFYTSISTNFVDGVAYEVGTIASTSAAAVALGGEQLDAEESTNYSIGFTWTVTDKLNITADAYRIEIDDRIVLSETLGDSDDEAVIVQQVFADNNIEGVGAVRFFMNGVNSVTEGVDVVANYTAGTVLNGDLSLSLGANYNNTDVSDVVATAGPSDLFEPDQLFARRERERLENAAPEVKANLTANWRGDALSLMFRTNYYGEVTQPGTTQEGDVTVDAAFIVDVEAGYLFTDNLEGKVGVNNLLDKYPESAVITDQPNPGQFDYIIPFPNFSPYGFQGRYAYAKVTYSF >NZ_CP008849.1|WP_044057500.1|2722734_2723130_-|glutathione-S-transferase MVLPITAFYVSLLGICYIYLSFLVIGVRRSAQISLGDGGNEDLKRLTRAHGNFSEYVPITLIMIACFEANTGQGWIVHGLAAALLFGRVLHAYGLRQHAGASWQRIAGMMLTFASMLMAAIANLVLIHFGL >NZ_CP008849.1|WP_044057501.1|2723240_2723885_-|adenylate-kinase MRIILLGAPGAGKGTQAQFLMGKYGIPQISTGDMLRAAIKAGTELGLKAKQVMDEGKLVSDDIIIGLVKERIAQDDCKDGFLLDGFPRTIPQADAMKEAGVKVDHCIEFDVPDDVIVERMGGRRVHPASGRVYHVVYNPPKEEGKDDVSGEDLIIRDDDKEETVRKRLAIYHEQTKPLVNYYSAEAEAGNCEYHKLDGTRPVDEVSAELAKRLG >NZ_CP008849.1|WP_044057503.1|2724204_2726127_-|molecular-chaperone-HtpG MAEAAHKETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRFRALEDGSLYENDGDLAVKISVDKEASTVTIADNGIGMTRDEVIANLGTIAKSGTKDFFSKLSGDNAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGTDAAEAIEWVSEGEGEFTIAEINKPTRGTEIVLHLREDEKEFADAWRLRSIISKYSDHISIPVQMWKDEVPESEGPDGEKIEAQPGEWEVVNKATALWTREKSDISDEEYNEFYKHISHDFTDPLAWAHNKVEGKTEYTSLLYIPSKAPFDMWNRDQNHGLKLYVQRVFIMDDAEQFMPTYLRFVKGLLDSNDLPLNVSREILQDNKITQTLRQGCTKRVLQMLEKMAKNDAEKYQSFWNEFGNVLKEGPAEDFSNREKIAGLLRFSSTHADSDAQTVSLADYIERMKEGQDKIYYVTADSLQAAKSSPHLEIFRKKGIEVLLMGERIDEWLMSHLTEFSEKQFVSIAKANLDLGDLEDEESKKAKEEAEKEVEGLLERAKTALGDKVGEVKFTHRLTDSPACIVADDNGMTTQMMKLMQAAGQTVPDVKYHLELNPEHALVKMLADTQDEALFNEWVGVLFDQAALSEQGSLKDPSTFVQNLNSLLMKLAK >NZ_CP008849.1|WP_044057504.1|2726266_2726866_-|recombination-protein-RecR MKFSPLLTELIQALTCLPGVGQKSAQRMAFHLLERNRTGALDLSNVLHNAMEHIHHCERCRTFTEDALCEICRHPEREASGLLCIVESPQDVLAIEQTLSYKGQYFVLMGHLSPIDGVGPNEIGLDELERRLSAGGINEVILATNPTVEGEATAHYIGQVCASHNIDASRIAHGVPVGGELEYIDGNTLTHAFSGRRKL >NZ_CP008849.1|WP_044057505.1|2727075_2727909_+|hypothetical-protein MKFRRPLMCAIVLSTSLTTPLALAQTAQIHHEVSLGISDIKDADDKFLGVGYRYYFDTVNMATQPWAISPYLQRANNASVNYFAIDDLNSINIDGEWFYSDTLIVRGRYGRISDERNLSDVTQQRVGISLSTFANDHWEYGAGIDLFDIEEAFYAYDDPTTRYKADDNELSFSIFARYTSFGGTAKSFTPGWDIAMKGTHFDDEFSIEIDADYYLKPNWSVGVAALYENHDGYSSENLVELGTNYWFNPYSSLRFGLGYDTDDGDLGSITLLGTFRF >NZ_CP008849.1|WP_044057506.1|2727915_2728848_-|hypothetical-protein MIKKPVVLISLLLACMAMLFTVGAAYSLYSKKQHDIDPKVREISGIEFDKKLRLWAINDSGDGPKLYMLNDDGSVAREVTVTNAKNIDWEDMTQNEFGHFFLGDFGNNENNRRWLTIYKIENPIDIKTDTTEAEIIKFTYPEMDGTPVEPHQKNFDLEAFIEFDHNLYLFTKNRTAPFDGITNVYKVGDHAANFNAEKIDAFKTCTTLEKLCWITSAAISPDRKRLVLLDSTSIWLFENFPSDRFFSGDIYRIDLGLITQKEAVTFYDNNTLVFTDEEFKGLIGGNAYKIELDKVAKQPIRTSSPSNPAE >NZ_CP008849.1|WP_044057507.1|2729001_2729328_-|YbaB/EbfC-family-nucleoid-associated-protein MFKGGMGNIMKQAQQMQERMQKVQDDLANLEVTGEAGAGMVKVTMTCNHNVRRVDIDDSLMDDDKDMVEDLVAAAFNDAVRRVQETSKEKMGDVTGGMPLPPGFKMPF >NZ_CP008849.1|WP_044057508.1|2729365_2731906_-|DNA-polymerase-III-subunit-gamma/tau MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSKSLNCEEGQGANPCGQCNTCKEIEHGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRYKVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSREQIVGQLTHILQEESLPFEPSALALLARAAQGSMRDALSLTDQAIAQGGNAVIASVVTDMLGLMDKNQLVKLLHAVVTKTPTDVMQLVQDIAEQAPDYSQVLGELASTLHQIALTQWVPDVCKLETTSAKAIFQLAKSIAPEQVQLFYQIALQGRKDLPLALDGRSALEMTLMRMMTFAPNEPISDTEEIISTGKSQLNSPVSAITASEASSAVVAEKPAEESSSVSQRQASHSDEQSSLTPESETTLTQPVEPQPVELTPEESGAAPTQPEQAPPIDEPVTEAQSPALTPETLPPSDESPFNDTPPLDAYHDDLPPQETGMFEGEFGYQEPVHINEATEKNADAEHLSDTSHGALQHGDNDAQLTSTADMLALRQKLKQQKVESAAESTKKAAKNDKDDGLFNRLSRGNGAQDITQAAQEPVAKENAPHTPDLGDDSPPWATESKGDDNPSSQSMAEPAQVEAPSRQVQTEEDLVTSQSHAPFAHESEPHANMPRNENSVDSQMSSDPLQPSEASDTGVAPQQYKGQLTAYLEDGKKLVHASQIDKWSYLVEQMPLAGLLKQLVLHASFSKNNGQVTLEIDNSQAHLLNESAKKQLLDALHHTLGEQVEIEIVLGNPAQTPYSLQQEIVAMREAYAHEVLESDEKIQALLSMFDASIVTDTVKAR >NZ_CP008849.1|WP_044057509.1|2731923_2732460_-|adenine-phosphoribosyltransferase MTAEYIKSVVKTVPDYPKPGILFRDVTSVLEDHKAFSSCISLLLEKYQGMGFNKVAGTEARGFLFGAPLAIEMGIGFVPVRKPNKLPREVVSECYELEYGTDTLEIHKDAIQPGDKVLLIDDLLATGGTIAASAKLIRRLGGEVEHAGFIINLPDLGGREKLDQIGVESFSLCEFEGE |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation |
|---|
| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
|---|