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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP008896 Pseudomonas fluorescens strain UK4 chromosome, complete genome 1 crisprs DinG,RT,DEDDh,csa3,cas3,WYL,PD-DExK 0 0 14 0

Results visualization

1. NZ_CP008896
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008896_1 1728397-1728510 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 344166 : 390484 67 Pseudomonas_phage(59.18%) holin NA
DBSCAN-SWA_2 697504 : 745282 34 Bacillus_phage(33.33%) protease,transposase,integrase attL 696704:696719|attR 747672:747687
DBSCAN-SWA_3 750262 : 821462 56 Brazilian_cedratvirus(25.0%) protease,integrase attL 793086:793101|attR 830570:830585
DBSCAN-SWA_4 1291666 : 1331308 35 uncultured_Caudovirales_phage(41.18%) protease,tRNA,transposase,holin NA
DBSCAN-SWA_5 1954411 : 2010212 58 Pseudomonas_phage(68.97%) tRNA,lysis,tail,terminase,portal,capsid,protease,head,integrase attL 1968123:1968149|attR 2014690:2014716
DBSCAN-SWA_6 2094723 : 2162605 58 Bacillus_phage(20.0%) transposase,integrase attL 2090721:2090741|attR 2121324:2121344
DBSCAN-SWA_7 2459243 : 2521007 65 Pseudomonas_phage(21.74%) plate,tRNA,tail,holin NA
DBSCAN-SWA_8 3255552 : 3266887 9 uncultured_Caudovirales_phage(75.0%) NA NA
DBSCAN-SWA_9 3283886 : 3298562 22 uncultured_Caudovirales_phage(88.89%) transposase NA
DBSCAN-SWA_10 3347752 : 3392296 38 Tupanvirus(20.0%) protease,holin NA
DBSCAN-SWA_11 3844290 : 3848076 6 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_12 4725949 : 4772376 47 Salmonella_phage(15.38%) transposase,integrase attL 4749645:4749660|attR 4761645:4761660
DBSCAN-SWA_13 4821314 : 4833600 14 Escherichia_phage(42.86%) transposase NA
DBSCAN-SWA_14 5307475 : 5312417 6 uncultured_Mediterranean_phage(33.33%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage