CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP011385	Calothrix sp. 336/3 plasmid unnamed3, complete sequence	0 crisprs	NA	0	0	0
NZ_CP011384	Calothrix sp. 336/3 plasmid unnamed2	0 crisprs	NA	0	0	0
NZ_CP011383	Calothrix sp. 336/3 plasmid unnamed1	2 crisprs	PD-DExK	0	2	1
NZ_CP011382	Calothrix sp. 336/3 chromosome, complete genome	19 crisprs	csx3,cas10,csm3gr7,csx10gr5,csm2gr11,csm6,csx21,2OG_CAS,DEDDh,PD-DExK,WYL,csa3,cas14j,cas6,csc1gr5,csc2gr7,cas10d,cas3,DinG	2	6	3

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011383_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011383_1

30523-30634

Orphan

Consensus_repeat	Method
AATGTAAGTGATTACAGGGCTTAATCTCCAGTTGTAAAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011383_1

>merge|NZ_CP011383|1|30523-30634|CRISPRCasFinder
AATGTAAGTGATTACAGGGCTTAATCTCCAGTTGTAAATGCCAAATCTATCGGCTACGTGTTCCCCATAGGTCAATGTAAGTGATTACAGGGCTTAATCTCCAGTTGTAAAT

>NZ_CP011383|1|1|30523-30634|CRISPRCasFinder
AATGTAAGTGATTACAGGGCTTAATCTCCAGTTGTAAAT	GCCAAATCTATCGGCTACGTGTTCCCCATAGGTC
AATGTAAGTGATTACAGGGCTTAATCTCCAGTTGTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011383.1\|WP_035159951.1\|38485_39463_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP011383.1\|WP_035152048.1\|25498_26824_+\|IS4-family-transposase	unknown	unknown	gnl\|CDD\|376573
NZ_CP011383.1\|WP_144416134.1\|36199_36391_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309752
NZ_CP011383.1\|WP_035159846.1\|31696_32011_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|379262
NZ_CP011383.1\|WP_035159836.1\|23116_23473_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_035159835.1\|22379_22643_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_052754566.1\|32098_32998_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_035159841.1\|28415_29435_+\|tRNA-dihydrouridine-synthase-family-protein	unknown	unknown	gnl\|CDD\|239200
NZ_CP011383.1\|WP_052754565.1\|31040_31304_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225687
NZ_CP011383.1\|WP_035159839.1\|27561_27771_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238192
NZ_CP011383.1\|WP_035159848.1\|34117_35692_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP011383.1\|WP_082127476.1\|36512_37229_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_CP011383.1\|WP_168163543.1\|37489_37642_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_144415958.1\|21428_22120_-\|IS1-family-transposase	unknown	unknown	gnl\|CDD\|224576
NZ_CP011383.1\|WP_035159843.1\|31315_31579_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_082127481.1\|18745_20770_-\|NACHT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227922
NZ_CP011383.1\|WP_035159837.1\|23851_24673_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378956
NZ_CP011383.1\|WP_082127475.1\|24669_25527_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|236093
NZ_CP011383.1\|WP_052754567.1\|32994_33375_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_035159842.1\|29788_30427_-\|glutathione-S-transferase	unknown	unknown	gnl\|CDD\|198298

Protein	Function_ID	Function_description	E-value
NZ_CP011383.1\|WP_035152048.1\|25498_26824_+\|IS4-family-transposase	gnl\|CDD\|376573	pfam01609, DDE_Tnp_1, Transposase DDE domain. Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contain three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction. This family contains transposases for IS4, IS421, IS5377, IS427, IS402, IS1355, IS5, which was original isolated in bacteriophage lambda.	1.602e-11
NZ_CP011383.1\|WP_144416134.1\|36199_36391_+\|hypothetical-protein	gnl\|CDD\|309752	pfam04755, PAP_fibrillin, PAP_fibrillin. This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins.	0.00958689
NZ_CP011383.1\|WP_035159846.1\|31696_32011_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|379262	pfam13560, HTH_31, Helix-turn-helix domain. This domain is a helix-turn-helix domain that probably binds to DNA.	9.73871e-08
NZ_CP011383.1\|WP_052754565.1\|31040_31304_+\|hypothetical-protein	gnl\|CDD\|225687	COG3145, AlkB, Alkylated DNA repair protein [DNA replication, recombination, and repair].	1.31528e-13
NZ_CP011383.1\|WP_035159841.1\|28415_29435_+\|tRNA-dihydrouridine-synthase-family-protein	gnl\|CDD\|239200	cd02801, DUS_like_FMN, Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also in some archaea. Most dihydrouridines are found in the D loop of t-RNAs. The role of dihydrouridine in tRNA is currently unknown, but may increase conformational flexibility of the tRNA. It is likely that different family members have different substrate specificities, which may overlap. 1VHN, a putative flavin oxidoreductase, has high sequence similarity to DUS. The enzymatic mechanism of 1VHN is not known at the present.	1.46548e-79
NZ_CP011383.1\|WP_035159848.1\|34117_35692_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.15766e-14
NZ_CP011383.1\|WP_035159839.1\|27561_27771_+\|hypothetical-protein	gnl\|CDD\|238192	cd00315, Cyt_C5_DNA_methylase, Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group to cytosine within the context of the CpG dinucleotide, has profound effects on the mammalian genome. These effects include transcriptional repression via inhibition of transcription factor binding or the recruitment of methyl-binding proteins and their associated chromatin remodeling factors, X chromosome inactivation, imprinting and the suppression of parasitic DNA sequences. DNA methylation is also essential for proper embryonic development and is an important player in both DNA repair and genome stability.	0.000151579
NZ_CP011383.1\|WP_082127476.1\|36512_37229_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	5.20958e-36
NZ_CP011383.1\|WP_144415958.1\|21428_22120_-\|IS1-family-transposase	gnl\|CDD\|224576	COG1662, InsB, Transposase and inactivated derivatives, IS1 family [DNA replication, recombination, and repair].	1.46919e-30
NZ_CP011383.1\|WP_035159951.1\|38485_39463_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	1.09902e-47
NZ_CP011383.1\|WP_082127481.1\|18745_20770_-\|NACHT-domain-containing-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	7.79242e-56
NZ_CP011383.1\|WP_035159837.1\|23851_24673_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|378956	pfam12802, MarR_2, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	6.82742e-07
NZ_CP011383.1\|WP_082127475.1\|24669_25527_+\|AAA-family-ATPase	gnl\|CDD\|236093	PRK07773, PRK07773, replicative DNA helicase; Validated.	1.33013e-93
NZ_CP011383.1\|WP_035159842.1\|29788_30427_-\|glutathione-S-transferase	gnl\|CDD\|198298	cd03189, GST_C_GTT1_like, C-terminal, alpha helical domain of GTT1-like Glutathione S-transferases. Glutathione S-transferase (GST) C-terminal domain family, Saccharomyces cerevisiae GTT1-like subfamily; composed of predominantly uncharacterized proteins with similarity to the S. cerevisiae GST protein, GTT1, and the Schizosaccharomyces pombe GST-III. GSTs are cytosolic dimeric proteins involved in cellular detoxification by catalyzing the conjugation of glutathione (GSH) with a wide range of endogenous and xenobiotic alkylating agents, including carcinogens, therapeutic drugs, environmental toxins, and products of oxidative stress. GSTs also show GSH peroxidase activity and are involved in the synthesis of prostaglandins and leukotrienes. The GST fold contains an N-terminal thioredoxin-fold domain and a C-terminal alpha helical domain, with an active site located in a cleft between the two domains. GSH binds to the N-terminal domain while the hydrophobic substrate occupies a pocket in the C-terminal domain. GTT1, a homodimer, exhibits GST activity with standard substrates and associates with the endoplasmic reticulum. Its expression is induced after diauxic shift and remains high throughout the stationary phase. S. pombe GST-III is implicated in the detoxification of various metals.	6.80234e-45

>NZ_CP011383.1|WP_035159842.1|29788_30427_-|glutathione-S-transferase
MIVVHHLNNSRSQRVLWLLEELGIEYELKYYERDPKTMLAPASLRQVHPLGKSPVITDADLTIAESGAIVEYLVNTYGNGRLIPAPSIPEHLRYTYWLHYAEGSAMPPLLLKLIFENFGIGDSDAMSAFIAPQIQLHFDYIESELSNNTWFVSEEFTAADIQMSFPLEMLATNATEVDNRPKIKGFLERIHARPAYKRALERGGKYNFANSI
>NZ_CP011383.1|WP_035159841.1|28415_29435_+|tRNA-dihydrouridine-synthase-family-protein
MFQISLPQSLHPDLPLTALAPMQDVTNLWFMKVIAHYGSPDYFFTEYFRVHDTSRLNRSILAAITENDTGRPVFAQMIGESIPDLVRTARELCRYDIAGVDLNMGCPAPRIYRKNVGGGLLREPEKVDRILGELRSTVNDRPLTVKMRVGFENTDNFYEILDIINCHSIDLLSLHGRTVKDMYHGEVKYNLIAEAVRRVDCPVLANGNINSATIAKQVLSQTGAAGVMVGRWAIGNPWIFNQIRQALRGEAIAPVPLVEVRNYIDRLWQTPNLETIPMSSRVGYLKMFLNYIAVLVDAEGDFLRLMRKTQTEVELLNLCDRILLADSNENLANSTDSSL
>NZ_CP011383.1|WP_035159839.1|27561_27771_+|hypothetical-protein
MAAKQTGGIQTTQLVEINPNAQRVLKYHFPDIPIHSDIRDYYPQPGEFELITLGFPFFFTTPTHISRLV
>NZ_CP011383.1|WP_035152048.1|25498_26824_+|IS4-family-transposase
MPTKKPRNPDHVRRRNTPLADNEAISEHLKNLLSPAIYAQSAYYRSLGLRDRILNLSLMVAAMLTVIWRQVASVHELTRMLEQEELLWGKAVKVSQQGLSQRFLSFPAELFERVFHDLLPLLKSRWLLREKRTLPAAVKYAKKHFVNIWIADGSTLEALFRKLDSLKDVPQGKLAGKICTVIDLLTRLPVQVWFHTNPLAHDTNFLDDLINIASAKTLLVLDRGFYDFGFFLRLIAKQVDFITRIKSNAVFDVERIFSYDYTLRDRIISFNTEDKHQKILRLRLIEVKQGKTWYAYVTSVLDPQILPPYVVADLYAKRWRIEEAFNTAKRLLGLSYLWTGSVNGVKLQVWATWLFYAVLIDLADAVADEIALPFERISLEMIFRGLYHFNHAYNKGRATDPVLFFAAPENKNLDVVKTIRKEPQTLDLSPFPLPLTIPAFP
>NZ_CP011383.1|WP_082127475.1|24669_25527_+|AAA-family-ATPase
MTDNLPPQNIEAEEAILGGIMLDPQAISRVSDRLVPEAFYISAHKDIYQSTLRLHQQGKPTDLLSVTSWLTDQDLLARIGGRNKLAYLVNCTVSAVNIDALAELVMDKYLRRRLIRVGNEIVELAYQQEAELPTILDRSEQKLYQVSNQKFSTNTEHNSTITAVAYSDLENTNPIYPTGFYDLDELIVGFEGGTLTLVAGRPSMGKSAIAMNLALQIMLLHKLPVAVFSLEMTKKQLEYRLWRIRDKLRFLRFCQEQYRGTQKAEKLVIVHLLVQNHANQKTEKP
>NZ_CP011383.1|WP_035159837.1|23851_24673_+|MarR-family-transcriptional-regulator
MNQLKKDKAPLFYQLTNEEWVETVKDLTGAEIKVLYYLRSLDPFGDRELDCSVTQIAIKLGLSKGAVSKALKRLDQMGLIAVELVRVKVRIKTGNNNVTEFPKENSVSYRKRKLPIGNDSLPEETEVSYSEQPLPIRNNQEPEVLPDEDFSTSKTIKTYSDFIKTLSEEERAKFLEFCQEKTKNLSQEVNDIEAWLAHKNKAGANRWEVYYEKFVLASQQKKNQSEQEKNELDKRESARRQFAEWQRELEESRLRGRKSGQEQAQNQSSGGET
>NZ_CP011383.1|WP_035159836.1|23116_23473_-|hypothetical-protein
MNFSQALDKTLDKFSISAKWLSEKTGVSQQMISGFRRGNQRIYSDSLEKILAGLPTDARNYLLFQLAEVDTNKVDLRSLIAQAPPEQKAEVLHLIADSFANHNRNPEPVAAVELLEAV
>NZ_CP011383.1|WP_035159835.1|22379_22643_+|hypothetical-protein
MNTNKTKKSGSSNEVFKFDHLFSRLSKWTAYGIGLYAAFTLTVQQNPQGVHLIPLAEIFVQAAKIEVVEQKKNGQPGDRPNHSNKKQ
>NZ_CP011383.1|WP_144415958.1|21428_22120_-|IS1-family-transposase
MECPRCGSSHTRKNGKKRGKQNHICCDCNRQFIDRYEPPQGYSDEVKRECLKMYVNGMGFRAIERVKGVHHTTLITWVKLVGELLPETYDPETIPEVGELDELETFVGFKKNKIWLWTAVNHFKQGILAWVLGDHSAETFRPLWDIVGTWQCYFYVTDGWLVYPGFIPEGDQIVSKTYMTRVEGENTRLRHYLARLHRKTLCYSKSVQMLRYSIRLLLYYLRFWDVPIPQ
>NZ_CP011383.1|WP_082127481.1|18745_20770_-|NACHT-domain-containing-protein
MREPIKLEWVYTGVKFLGNEAIRSFESIENLEQFYRQGSRRRFKSQDKGKQEGIIVANKKQYLMVLGAPGAGKSTFLRKMGLEALKGQDGGFKHDCIPVFIELKRFQHRDINIENFIVKEFSNCEVPQPEEFTTQALKEGKLLILLDGLDEVPTKKLTNVISHIEDFVETYKKNRFIASCRIAAYRSSFRRFSDVTMADFDDNQIQQFIQNWFHSETDKEAQTGDKCWELLQKPENNAAKELAHTPLLLTFLCLVYDRSQNFPNNRSVLYKKALRILLEEWASEKKILRDEIYQGLHTELEEILLSEIAYTGFEADRLFFPGRDIVDKIKEFLASNLNAPQHLDGEAVLNAIAVQQGILVERAEDIFSFSHLTLQEYLTAQYIDDHRLVEKLVTKHLIDKRWKEVFLLVAGLMRGGADDLLLRMEKEAQKYINTPKLQALLNWAEQATTGSTGDFKSVGKRAVAIGYAIANAYANANANANAYAIAIAIANANANAYADAEAIAYAYAEAIADAEAIANANAYAKAIANANAYAKAIAYAEAIANAEAIANADANADAIAYAIKYIRQLEELTIFNNVNFTKLIDSLNKLKTKIPDEKQPQKVRQEFLQHLQQTLLNAFNLSPDIINLSKSESKALENYLYANKLLIQCKQASVRLSPTTWEGIEERMLLVLGN
>NZ_CP011383.1|WP_052754565.1|31040_31304_+|hypothetical-protein
MGTRPAIASAKRSFIAFLTLGATRKFQLRPNNAGKPTDFWLEHGSLLLMQGYQEGWVHQVPKTSKLIGERINLTFRPHVNGKTKDYD
>NZ_CP011383.1|WP_035159843.1|31315_31579_+|hypothetical-protein
MLIIHQMSAIQKLLEEKNWNISQLAVAYGKAESPGISDEEAIKKYGSIMRKVVKNPEDTKHKIVQKVVEILGGRLVVKIDRTDELPL
>NZ_CP011383.1|WP_035159846.1|31696_32011_+|helix-turn-helix-domain-containing-protein
MSINSKDKLMISLKYVDKLKWSPELGKRLQELRGDISMRALAEKVSSLGLNCSHQYIYKLEDGRAEAVSTDIIVAICKVLGTDFKVLFPSAYLDISHLLAQDCI
>NZ_CP011383.1|WP_052754566.1|32098_32998_+|hypothetical-protein
MTHLPLPERTDSQKVVGGFYPLQKQELIALRQAKLINNVAYVHLALRYENPFCDRPIEIVAKEFALRWLLPESSLYEALGKLRKLEAIIVKAGKLLVQWAHSQQESDSENPELITESQNELQDVITDSEIPENQCPKPLLEKDFISPQTIQTIQTNKTRAVSEKNAEETAPTDVTPKLPSPQQTQTSAQKDDFQIPQDLQGKLQQLNIPLDTRVRTALSNHDLSQAYGALAHIERTWETINNPRSIFLFQISRQPVEPMGTRLPVKTAADWQWDLEYIKRMYPTTWQEAAAYFGVEVFP
>NZ_CP011383.1|WP_052754567.1|32994_33375_+|hypothetical-protein
MSGLFDDQPNNQLMPSDTLSVEVVQPEQQTLEEQREPLSQEELHLRLHLERKVERAFYEAGKALQSLRDRRLYRSTHKNFEEYCRDRFGFERRHPYRLIDAADVVDNLAQMCPNGLQILPTSDTNS
>NZ_CP011383.1|WP_035159848.1|34117_35692_-|GMC-family-oxidoreductase
MSQMLNRRRFLQASAAAAASIGVSTVRTWAGGVDEYVEAIVIGSGFGGAVASLRLGQAGIETVVLERGRRWQITDAGNTFSTTNNPDGRSTWLSPTTVLPPPVPEIPIDVYTGVLDVKRGNGINAYRGAGVGGTSLVYGGITYQPTEELFYKVFPRTIKYSELDRVYYPRVRSILKASPIPDDILQTKYYLASRILQEQAAKAGLQTRKIDIAFDWDIVRQEISNQKVASVIAGQIYYGTNSGAKNSLDRNYLSMAEATGNVEIRPLHVVTMIGESDRGRYRVVCNQINEQGEVLFQKSFVCRYLFLAAGSIGTTELLLRAKTNRTLRRLNNHVGKFWGTNSDSNTVMINAGETNPTLGTPGVIAVEHLDNPIAPVVLEPFQSLPFIPQGLIPVLGQGISQPEGYLTFNTATQSSDLFWPINSADSQKNAQALQYTYQRLNLANSTSLAAPPDYSSTAHPLGGATVGRVCNTHGQVFGYPNLFIVDGSFIPGSTACSNPSLTIAALAERSMDHFLNWIPRLRKI
>NZ_CP011383.1|WP_144416134.1|36199_36391_+|hypothetical-protein
MSVFALESLNVLIHKGFSHFFSLIRNKSNDEDHELEKYIGYDLDGEIRIGRGATGNLFVFRRA
>NZ_CP011383.1|WP_082127476.1|36512_37229_+|glutathione-S-transferase-family-protein
MIQQLPVRLLTFTSAIIFGYFPIYPILAVPVSQNNIPRASTNQTKLKLYGGAKTRTPMVQWYLEELGIKYEYISLNISAGENRKPEYLAINPMGKVPAISDGNLKLWESGAILLYLSEKYQKKTGSIEEYPQVTQWVFFANATLSPALFTEEKRKTEMPRLLTVLNQILQNKSFLVGNNLTAADIGIASYLYYAKILVPVNYDRYPAITAYLNAMEARPAFKNTLGQRNANTKNKNQS
>NZ_CP011383.1|WP_168163543.1|37489_37642_-|hypothetical-protein
MDGLHDHIQATAKMEGYQIPEATGPVKIEGEQATATSSLAGDQTQTVAPS
>NZ_CP011383.1|WP_035159951.1|38485_39463_-|ParB/RepB/Spo0J-family-partition-protein
MKPTTTKTTKKEQPYSSKLQGVAALLGENAYIKESETAQNPPISIAIALIKLPPSQPRRYFDLNKLEELSRSIQDLGVIEPLLVRPLTGGNYELVAGERRYKAAQLAGLTEVPVVVREMNDVTTSKVQIVENLQREDLNPIEETEGILDLLGLQLKWQRDEVTSHLNKMRNVCDRHSENSAVRHNVMSQQKTKIIEELFASLGRMSWESFIKNRLPLLNLPSCVLEALRQGKLEYTKARAIAKVKDEESRQQLLQDAIAYNLSLNEIKRKIKEIEQPAKPEASIKDKVDDTFRRLKKSQVWDDPKKKVKVEKLLSQLDALMQDEK

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Crispr_ID: NZ_CP011383_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011383_2

43440-43532

Orphan

Consensus_repeat	Method
GTAGTTGGGAGGGCGATCGCTTTCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011383_2

>merge|NZ_CP011383|2|43440-43532|CRISPRCasFinder
GTAGTTGGGAGGGCGATCGCTTTCCTATATTTCCTTGTAGATGAGGCAACATTGATGCGTGGGGTGTGTAGTTGGAAGGGCGATCGCTTTCCT

>NZ_CP011383|2|2|43440-43532|CRISPRCasFinder
GTAGTTGGGAGGGCGATCGCTTTCCT	ATATTTCCTTGTAGATGAGGCAACATTGATGCGTGGGGTGT
GTAGTTGGAAGGGCGATCGCTTTCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011383.1\|WP_144416134.1\|36199_36391_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|309752
NZ_CP011383.1\|WP_035159871.1\|58038_61167_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223704
NZ_CP011383.1\|WP_046815075.1\|50225_52496_-\|type-IV-secretion-system-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|313610
NZ_CP011383.1\|WP_035159866.1\|53302_53932_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_035159869.1\|55822_56506_+\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|238119
NZ_CP011383.1\|WP_082127479.1\|55321_55534_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	unknown	unknown	gnl\|CDD\|379750
NZ_CP011383.1\|WP_052754566.1\|32098_32998_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_035159848.1\|34117_35692_-\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP011383.1\|WP_082127477.1\|43734_44133_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|271197
NZ_CP011383.1\|WP_144416137.1\|54710_54917_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_082127476.1\|36512_37229_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223698
NZ_CP011383.1\|WP_168163543.1\|37489_37642_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_144416135.1\|43083_43335_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011383.1\|WP_052754569.1\|56519_57974_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011383.1\|WP_035159951.1\|38485_39463_-\|ParB/RepB/Spo0J-family-partition-protein	unknown	unknown	gnl\|CDD\|275105
NZ_CP011383.1\|WP_035159851.1\|39462_40230_-\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP011383.1\|WP_035159860.1\|48989_49679_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|349760
NZ_CP011383.1\|WP_144416136.1\|52560_53313_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349771
NZ_CP011383.1\|WP_082127446.1\|40585_41785_-\|ISAzo13-family-transposase	unknown	unknown	gnl\|CDD\|369439
NZ_CP011383.1\|WP_052754567.1\|32994_33375_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011383.1\|WP_144416134.1\|36199_36391_+\|hypothetical-protein	gnl\|CDD\|309752	pfam04755, PAP_fibrillin, PAP_fibrillin. This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins.	0.00958689
NZ_CP011383.1\|WP_046815075.1\|50225_52496_-\|type-IV-secretion-system-DNA-binding-domain-containing-protein	gnl\|CDD\|313610	pfam10412, TrwB_AAD_bind, Type IV secretion-system coupling protein DNA-binding domain. The plasmid conjugative coupling protein TrwB forms hexamers from six structurally very similar protomers. This hexamer contains a central channel running from the cytosolic pole (made up by the AADs) to the membrane pole ending at the transmembrane pore shaped by 12 transmembrane helices, rendering an overall mushroom-like structure. The TrwB_AAD (all-alpha domain) domain appears to be the DNA-binding domain of the structure. TrwB, a basic integral inner-membrane nucleoside-triphosphate-binding protein, is the structural prototype for the type IV secretion system coupling proteins, a family of proteins essential for macromolecular transport between cells and export.	1.41995e-38
NZ_CP011383.1\|WP_035159869.1\|55822_56506_+\|VWA-domain-containing-protein	gnl\|CDD\|238119	cd00198, vWFA, Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains.	1.07939e-08
NZ_CP011383.1\|WP_035159860.1\|48989_49679_+\|ParA-family-protein	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	4.23559e-43
NZ_CP011383.1\|WP_035159848.1\|34117_35692_-\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	2.15766e-14
NZ_CP011383.1\|WP_082127477.1\|43734_44133_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|271197	cd01197, INT_FimBE_like, FimB and FimE and related proteins, integrase/recombinases. This CD includes proteins similar to E.coli FimE and FimB and Proteus mirabilis MrpI. FimB and FimE are the regulatory proteins during expression of type 1 fimbriae in Escherichia coli. The fimB and fimE proteins direct the phase switch into the 'on' and 'off' position. MrpI is the regulatory protein of proteus mirabilis fimbriae expression. This family belongs to the integrase/recombinase superfamily.	2.81752e-27
NZ_CP011383.1\|WP_035159871.1\|58038_61167_+\|hypothetical-protein	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	2.74678e-07
NZ_CP011383.1\|WP_082127476.1\|36512_37229_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223698	COG0625, Gst, Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	5.20958e-36
NZ_CP011383.1\|WP_082127479.1\|55321_55534_+\|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family	gnl\|CDD\|379750	pfam15738, YafQ_toxin, Bacterial toxin of type II toxin-antitoxin system, YafQ. YafQ is a family of bacterial toxin ribonucleases of type II toxin-antitoxin systems. The E.coli gene is expressed from the dinB operon. The cognate antitoxin for the E. coli protein is DinJ, in family RelB_antitoxin, pfam02604.	5.69401e-17
NZ_CP011383.1\|WP_052754569.1\|56519_57974_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	9.32683e-17
NZ_CP011383.1\|WP_035159951.1\|38485_39463_-\|ParB/RepB/Spo0J-family-partition-protein	gnl\|CDD\|275105	TIGR04285, parB-like_partition_protein, nucleoid occlusion protein. This model describes nucleoid occlusion protein, a close homolog to ParB chromosome partitioning proteins including Spo0J in Bacillus subtilis. Its gene often is located near the gene for the Spo0J ortholog. This protein bind a specific DNA sequence and blocks cytokinesis from happening until chromosome segregation is complete.	1.09902e-47
NZ_CP011383.1\|WP_035159851.1\|39462_40230_-\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	5.98193e-65
NZ_CP011383.1\|WP_144416136.1\|52560_53313_+\|hypothetical-protein	gnl\|CDD\|349771	cd05386, TraL, transfer origin protein TraL. The transfer origin protein TraL is member of the SIMIBI superfamily which contains a ATP-binding domain. Proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion. The specific function of TraL protein is unknown.	1.0714e-19
NZ_CP011383.1\|WP_082127446.1\|40585_41785_-\|ISAzo13-family-transposase	gnl\|CDD\|369439	pfam07592, DDE_Tnp_ISAZ013, Rhodopirellula transposase DDE domain. These transposases are found in the planctomycete Rhodopirellula baltica, the cyanobacterium Nostoc, and the Gram-positive bacterium Streptomyces.	7.66957e-113

>NZ_CP011383.1|WP_144416135.1|43083_43335_+|hypothetical-protein
MISKKSQDIIPDKLKRFDAAYSIMARLAAFSVACLGTWMCASGNPSNAAFLLGIADIFLKAAQTQTLAPDQKKDAPAQPEDKD
>NZ_CP011383.1|WP_082127446.1|40585_41785_-|ISAzo13-family-transposase
MQLTENLKSLYIKTAKKLKGSDRRQFMAEVVKGLGIGGQTLVERELGWNRRTIRKGMQELESGQPFIDGFERSGRRRVETKLPNLLSDIKSLVDPQSQTDPSFKSIRLYTRMTASEVRRQLIEQCGYSDEELPSSETIRRRLNDLGYTLKRVLKTKPTKKIPETEAIFEQVEQINTEADNDPHTLRISIDAKVAVKVGEFDRGGKTRVPTISLDHDFAPETTLIPYGIFLPEYNELFLFFVSSKLTADCIVDIVESWWQSIKHRFTHIQKLVINQDNGPENHSRRTQFMKRIIDFATSSKLSLQLAYYPPYHSKYNPVERCFGWLEQHWNGSLVDTVEAVLNFAKTLTFKGQNPVVTLVEKVYSTGVKLTNKAMAEVEKQIYRLPNLRKWFVEVFAKPA
>NZ_CP011383.1|WP_035159851.1|39462_40230_-|ParA-family-protein
MSKTRVIALFNQSGGVGKTSLTMNLGYHLAQKKKNRVLLLDLDPQASLTTFMGLESENLTKTVYEAVVGEEDLPVHPELIHGMAIVPANINLSAAELELVAALMREMRLKNAIAPVLDKYDYILIDCPPSLGILSVISLVAATHVLVPIQCQFKSFQGTDLLLKTVAALRKGANPTLAIAGFIPTMYDARTAQESRTNQAIKEQLSPLATVFDPIPKTIAFADASEARLPLALYNSKNSAVSVLKKIASSLEKLS
>NZ_CP011383.1|WP_035159951.1|38485_39463_-|ParB/RepB/Spo0J-family-partition-protein
MKPTTTKTTKKEQPYSSKLQGVAALLGENAYIKESETAQNPPISIAIALIKLPPSQPRRYFDLNKLEELSRSIQDLGVIEPLLVRPLTGGNYELVAGERRYKAAQLAGLTEVPVVVREMNDVTTSKVQIVENLQREDLNPIEETEGILDLLGLQLKWQRDEVTSHLNKMRNVCDRHSENSAVRHNVMSQQKTKIIEELFASLGRMSWESFIKNRLPLLNLPSCVLEALRQGKLEYTKARAIAKVKDEESRQQLLQDAIAYNLSLNEIKRKIKEIEQPAKPEASIKDKVDDTFRRLKKSQVWDDPKKKVKVEKLLSQLDALMQDEK
>NZ_CP011383.1|WP_168163543.1|37489_37642_-|hypothetical-protein
MDGLHDHIQATAKMEGYQIPEATGPVKIEGEQATATSSLAGDQTQTVAPS
>NZ_CP011383.1|WP_082127476.1|36512_37229_+|glutathione-S-transferase-family-protein
MIQQLPVRLLTFTSAIIFGYFPIYPILAVPVSQNNIPRASTNQTKLKLYGGAKTRTPMVQWYLEELGIKYEYISLNISAGENRKPEYLAINPMGKVPAISDGNLKLWESGAILLYLSEKYQKKTGSIEEYPQVTQWVFFANATLSPALFTEEKRKTEMPRLLTVLNQILQNKSFLVGNNLTAADIGIASYLYYAKILVPVNYDRYPAITAYLNAMEARPAFKNTLGQRNANTKNKNQS
>NZ_CP011383.1|WP_144416134.1|36199_36391_+|hypothetical-protein
MSVFALESLNVLIHKGFSHFFSLIRNKSNDEDHELEKYIGYDLDGEIRIGRGATGNLFVFRRA
>NZ_CP011383.1|WP_035159848.1|34117_35692_-|GMC-family-oxidoreductase
MSQMLNRRRFLQASAAAAASIGVSTVRTWAGGVDEYVEAIVIGSGFGGAVASLRLGQAGIETVVLERGRRWQITDAGNTFSTTNNPDGRSTWLSPTTVLPPPVPEIPIDVYTGVLDVKRGNGINAYRGAGVGGTSLVYGGITYQPTEELFYKVFPRTIKYSELDRVYYPRVRSILKASPIPDDILQTKYYLASRILQEQAAKAGLQTRKIDIAFDWDIVRQEISNQKVASVIAGQIYYGTNSGAKNSLDRNYLSMAEATGNVEIRPLHVVTMIGESDRGRYRVVCNQINEQGEVLFQKSFVCRYLFLAAGSIGTTELLLRAKTNRTLRRLNNHVGKFWGTNSDSNTVMINAGETNPTLGTPGVIAVEHLDNPIAPVVLEPFQSLPFIPQGLIPVLGQGISQPEGYLTFNTATQSSDLFWPINSADSQKNAQALQYTYQRLNLANSTSLAAPPDYSSTAHPLGGATVGRVCNTHGQVFGYPNLFIVDGSFIPGSTACSNPSLTIAALAERSMDHFLNWIPRLRKI
>NZ_CP011383.1|WP_052754567.1|32994_33375_+|hypothetical-protein
MSGLFDDQPNNQLMPSDTLSVEVVQPEQQTLEEQREPLSQEELHLRLHLERKVERAFYEAGKALQSLRDRRLYRSTHKNFEEYCRDRFGFERRHPYRLIDAADVVDNLAQMCPNGLQILPTSDTNS
>NZ_CP011383.1|WP_052754566.1|32098_32998_+|hypothetical-protein
MTHLPLPERTDSQKVVGGFYPLQKQELIALRQAKLINNVAYVHLALRYENPFCDRPIEIVAKEFALRWLLPESSLYEALGKLRKLEAIIVKAGKLLVQWAHSQQESDSENPELITESQNELQDVITDSEIPENQCPKPLLEKDFISPQTIQTIQTNKTRAVSEKNAEETAPTDVTPKLPSPQQTQTSAQKDDFQIPQDLQGKLQQLNIPLDTRVRTALSNHDLSQAYGALAHIERTWETINNPRSIFLFQISRQPVEPMGTRLPVKTAADWQWDLEYIKRMYPTTWQEAAAYFGVEVFP
>NZ_CP011383.1|WP_082127477.1|43734_44133_+|tyrosine-type-recombinase/integrase
MISHPHPPVKVASKREREYLRPKEVEAMIKGAHSFGRHGVRDAAIILLMFRHGFRTAELVSLKWSQIDLNDGYIEIRRVKHGHDSTHPLRAPELRALRQIKRDYPETQYVFVSERKAPLSTRTIRHIIARAD
>NZ_CP011383.1|WP_035159860.1|48989_49679_+|ParA-family-protein
MTAKIIAIVNQKGGSGKTTTTMQLAGAIARRGNKVLVVDADPQGTATRWAASADDEIPFPASVVGLSAANAKVHREVKKFVDDYDFILIDCPPAADSPVPQSALLISDVALVPIIPSPLDMWAAVGIKQVIQNVADFNDTLQSRLVLNQCQPKTTLAQECLQVLPEFEIPLAKTQIQHRQVYRQSAVFGQTVHNLGNKATAAISEVENLADEVLEILGIATKKKKKKNS
>NZ_CP011383.1|WP_046815075.1|50225_52496_-|type-IV-secretion-system-DNA-binding-domain-containing-protein
MPDIDTHCQVGNTVFAFSPLLATTGCCLRGIMKFFSSLERLFEELLERWIDPISEWEHRFENFWTNVLVSWAVIGVWGLFALLWMNLVSAHSFFRFLDQSGLLLYFCGGVLVVACFYFAWKPVAKGRTIGLFVVWLVILGMNAQTPAHMQTASADGQWLVHFCKALYSTHPFYLGGWYGLTAWQTLVLVFRHHKAKQPHYWGLLLSGFILLTIIYLISPGLGFLFALTVPNEFFNRWLQSTAENDIHIRGSKLTPSKKARYAYRKRLGADARASEQTFLLGNVDIPVQELTTHLVACGSSGSGKSITLKLIMQACLPLITPDSIFRAVVFDPKHNAQGEILGIDGIQGEVLNFNAFQHGACRYDMAKDFVTPTHAQAFADILIPEPKSAERGDRFFRDAAINILTGVTLLFIINAPGQWRLADIVRAFGSEKILSALLTSDPQTAFYLNSLGSEKTSANILASVCAEIYRYLPIAALWEHAPRSASVREWLNGGQIWLLGEDEEARPAMNALNRLILTRMSQSLLKETDYPEPRTFLFLDELQSIHVEALQEIATKGRSKGICLIAAFQSIQGMYNRYGKEVSDSILGQIRHKAFLKMSDAPSAQWACAQMGDAEVKRQQATSSFSRGVGGLITWSDRTGGSQSIQQTPVVMASEFINIPPVHPPTNQGLTGFYQTSINYKDYIPWDKLHPLLQPAATVDIHPAPPDWQRLEPWREDDWERLGIAEVMHKLNTENTMPMPPPPPAMPDYPSWLSGD
>NZ_CP011383.1|WP_144416136.1|52560_53313_+|hypothetical-protein
MLFLLVVVYKNLSPIMDAVIVYNPKGGVGKSMVCSTVYQYLLDHNTPFIAFDTDRNNPDCYRRYKDLLPVKLAIFSEANKYEDAANSLFNEAMNNLVVVNMPAQVHQPFKDWLEKNEILEIAPEVGVRFHLWFVTDSGFDSLNLLQKTLELYQDKMRYTIVRNFGRSEEFDAFEQHEAIQKLLKTLQATVIDFPVLNGSMVRHRLDSESLSYGVALAREDFGIIEKQRIRKFLRESYAAFAKTEVFAHVN
>NZ_CP011383.1|WP_035159866.1|53302_53932_+|hypothetical-protein
MSTSRTSQDLLDRVLVGRDDTTKARVLDLVLRLGISPQDELFIIMIALNHLQLLIEDAPQDWQTLFVDFQQELEEWSQINLDTLDAIIRKSEQEMLLAQTAQQLVSALTTSTACWTELSTLLSKSPLLSRVSNQTSQLQELSAQLQSIQTTQKQQGERLNKLLATTTKSTVNRLHLPPWLIILLTLLTLSSILNYLLLQAINGAIAKGG
>NZ_CP011383.1|WP_144416137.1|54710_54917_+|hypothetical-protein
MFHPFRTIARFITLTFIIALLLYSHHAAFKAGMAAGENPMTNTLAQFMGLGSSSSCASPLKEKKFYFF
>NZ_CP011383.1|WP_082127479.1|55321_55534_+|type-II-toxin-antitoxin-system-mRNA-interferase-toxin,-RelE/StbE-family
MRYHLKISRGYQRDLERLKRKRHDLNRLLKTLTMLRHGESLPASYRPHRLRHASYAGFYECHLAFDWLLV
>NZ_CP011383.1|WP_035159869.1|55822_56506_+|VWA-domain-containing-protein
MTDIASKVLYAADIVLVIDTTASMGPFIEDTKKLAMGFHERISREMRAKGKTVDQLRVRLIVFRDYYDKEENAIVATPFWKMPEEEGKLVEFVSMLQAGGGGDEPENGLEALALAIRSSWEQGQGFQKCRHSIVVFTDASAHPLEHPGKPPSYPKDMPKDLNELTDMWFAEMRNTAKRLTIFAPDVPPWNIFEGAWDCTQHHKSHAGSGLDEQTLSDLVEGITNSIT
>NZ_CP011383.1|WP_052754569.1|56519_57974_+|protein-kinase
MVLRKGDELRNPSGASYRVRTDFSSKDAGTSQWGFVEGEGAEYFAKRYLSPVNPGIKALGSEDVKRQRRSACAVFEERQQRLNNTLRDCSAAVTFVDFFAFGDESNRHYYKICPKIAPIATVEQIHAASAFAKLHVMQAAATALTMFHDCGLIHLDIKPQNILIHGTNLERPQAYLIDFDNSIFCLEDIKGAELVGDMSYYSPEVAERIVTNTLASTLTQKADIFSLGVVFFEYCTGHPVLATYGKEFYQWATENCKKRWILEDIDLWGRNSASTYQREVNGMFTSLISNMLSFDVSARTSLKEVLAILKKIIALIESEHMGYKLQEAYRDNRILEEDNQKLNEEIEELILIENQYESLQLKYKEQQKFLEKYKKLYSNNEELKKAQEKNIVKLRENLNDDDKYINFLEEKLHFYTNLSVILSVWVVPSVLWAFSTLPFFPLSFGFKVQREVIEERRPLGESVLGEPTEPPLLPADVPPPEKSR
>NZ_CP011383.1|WP_035159871.1|58038_61167_+|hypothetical-protein
MINDDLRAVVLVEKTLDEGEDGVPVCVRGDNSIGLAVFDGLGGDAAYGEIASAIISNFTNKFLQQNRDTVLTREKMLTFEQQANARLLAEAQRLKTEEQAGTRPLTDKKYRCVTTIALANILPQNDGSYRTQLSWAGDSRVYFLSPSKGLQALTLDDSWRKSIRPITDKTRPPISKDFPFNAATRPVRPTKETYTVEDIYRSDSTGHSFAEKKVRMPWDDNIYAINFKEEIIREPGIFIVCTDGAYSSMVAPQDEEERYLDFIEAATSAEDFREAPARFFETNKKTAFSDDAVSIVMQPVGFNDFADMQKQFQERINFVRGLAAPDFVAQGCNDAEARTKRMEHTQKIWEEHIRDTYTEMLFSDMVFESAKDSRDISLSPVVVPDVLPASITEPPASPVTMEVVSETKVTEETATESPEGSSTLAEETSSIPSAVMPSPSLWQTICEQVGQVVRPLARLLGFDPEHLRRDSDQENERRLAKIGDDFTYRGELPSADLPAKAATLTDLAKMVATHTVPKELLSVDEALYAETRAAFAELRASCEQYDHLLEGATLTNALTVATDASSIRPNPPGFFFPDSVLSAPPLPPPLPLPSAAPAPAGGFGTDSTTTSTSNSVSSVPPSTVAVPPPISRTPWWKSSTFWKAAAVTAGIVGLGFGTYMLASQYEHSAPDTNHTGVPPPDTNIPNSIRPPAWVEPISRDMANGVLSERSLAAMQNLPENWTETLARHNPEAAHKLHQVLGQYIDGQEKVAGMLADSQMRALRDCGGVAIAGYTPGDESATLAFINQTFARYGLSEQFASYADAQTYIAQHAAQQYGKVDQLLGLDTETTYRRFDTAIQSVPGDGIYEQLRQQWAGQGAALQEVRQKLAHSLQATTAVPGLQPATTSGTGLAMLPVPAPSLSHIALTMGTGVSQMATRMALAHAVPVVGAAITAYSLGKRTYDHLMTKADTLGILEERKDSPLVERLLHSPGDMGRTVAKAVKDAPTDFKNMLQRFAKVAQHTITATAQVIKNRTLLPPALGNEVEDVAAYLSGYSSERKGY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011383_1	1.1\|30562\|34\|NZ_CP011383\|CRISPRCasFinder	30562-30595	34	NZ_CP011383	Calothrix sp. 336/3 plasmid unnamed1	30562-30595	0	1.0
NZ_CP011383_2	2.1\|43466\|41\|NZ_CP011383\|CRISPRCasFinder	43466-43506	41	NZ_CP011383	Calothrix sp. 336/3 plasmid unnamed1	43466-43506	0	1.0

1. spacer 1.1|30562|34|NZ_CP011383|CRISPRCasFinder matches to NZ_CP011383 (Calothrix sp. 336/3 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

gccaaatctatcggctacgtgttccccataggtc	CRISPR spacer
gccaaatctatcggctacgtgttccccataggtc	Protospacer
**********************************

2. spacer 2.1|43466|41|NZ_CP011383|CRISPRCasFinder matches to NZ_CP011383 (Calothrix sp. 336/3 plasmid unnamed1) position: , mismatch: 0, identity: 1.0

atatttccttgtagatgaggcaacattgatgcgtggggtgt	CRISPR spacer
atatttccttgtagatgaggcaacattgatgcgtggggtgt	Protospacer
*****************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2927 : 62021

Escherichia_phage(18.18%)

integrase,tRNA,transposase

attL 21405:21464|attR 61987:62742

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035159822.1\|2927_3926_-\|integrase	tyrosine-type recombinase/integrase	A0A0H3V0V1	Geobacillus_virus	9.8e-06	22.1
WP_052754563.1\|4013_4235_-	hypothetical protein	NA	NA	NA	NA
WP_035152048.1\|4324_5650_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_052754564.1\|5657_6041_-	hypothetical protein	NA	NA	NA	NA
WP_035159824.1\|6144_6798_-	hypothetical protein	NA	NA	NA	NA
WP_035159825.1\|7324_7636_+	hypothetical protein	NA	NA	NA	NA
WP_035159826.1\|7880_9314_+	S8 family serine peptidase	NA	NA	NA	NA
WP_035159827.1\|10108_11164_+	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_035159828.1\|11540_13037_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.3e-21	33.6
WP_046815071.1\|13069_14140_+	ABC transporter permease	NA	NA	NA	NA
WP_035159830.1\|14760_15696_+	ABC transporter permease	NA	NA	NA	NA
WP_144416132.1\|15774_15978_+	hypothetical protein	NA	NA	NA	NA
WP_035159833.1\|16123_16699_-	Uma2 family endonuclease	NA	NA	NA	NA
WP_144416115.1\|17175_18426_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_082127481.1\|18745_20770_-	NACHT domain-containing protein	NA	NA	NA	NA
21405:21464	attL	NA	NA	NA	NA
WP_144415958.1\|21428_22120_-\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	8.3e-20	29.5
WP_035159835.1\|22379_22643_+	hypothetical protein	NA	NA	NA	NA
WP_035159836.1\|23116_23473_-	hypothetical protein	NA	NA	NA	NA
WP_035159837.1\|23851_24673_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_082127475.1\|24669_25527_+	AAA family ATPase	A0A2H4PAV8	Aphanizomenon_phage	4.1e-53	49.6
WP_035152048.1\|25498_26824_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_035159839.1\|27561_27771_+	hypothetical protein	U5XHV6	Phormidium_phage	4.4e-09	55.3
WP_035159841.1\|28415_29435_+\|tRNA	tRNA-dihydrouridine synthase family protein	NA	NA	NA	NA
WP_035159842.1\|29788_30427_-	glutathione S-transferase	NA	NA	NA	NA
WP_052754565.1\|31040_31304_+	hypothetical protein	A0A1V0SJ11	Klosneuvirus	5.2e-07	51.5
WP_035159843.1\|31315_31579_+	hypothetical protein	NA	NA	NA	NA
WP_035159846.1\|31696_32011_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_052754566.1\|32098_32998_+	hypothetical protein	NA	NA	NA	NA
WP_052754567.1\|32994_33375_+	hypothetical protein	NA	NA	NA	NA
WP_035159848.1\|34117_35692_-	GMC family oxidoreductase	NA	NA	NA	NA
WP_144416134.1\|36199_36391_+	hypothetical protein	NA	NA	NA	NA
WP_082127476.1\|36512_37229_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_168163543.1\|37489_37642_-	hypothetical protein	NA	NA	NA	NA
WP_035159951.1\|38485_39463_-	ParB/RepB/Spo0J family partition protein	S5VTK0	Leptospira_phage	2.0e-11	25.4
WP_035159851.1\|39462_40230_-	ParA family protein	Q8JL10	Natrialba_phage	3.1e-15	28.2
WP_082127446.1\|40585_41785_-\|transposase	ISAzo13 family transposase	NA	NA	NA	NA
WP_144416135.1\|43083_43335_+	hypothetical protein	NA	NA	NA	NA
WP_082127477.1\|43734_44133_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_035159860.1\|48989_49679_+	ParA family protein	A2I303	Vibrio_virus	9.7e-21	31.5
WP_046815075.1\|50225_52496_-	type IV secretion system DNA-binding domain-containing protein	NA	NA	NA	NA
WP_144416136.1\|52560_53313_+	hypothetical protein	NA	NA	NA	NA
WP_035159866.1\|53302_53932_+	hypothetical protein	NA	NA	NA	NA
WP_144416137.1\|54710_54917_+	hypothetical protein	NA	NA	NA	NA
WP_082127479.1\|55321_55534_+	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA	NA	NA	NA
WP_035159869.1\|55822_56506_+	VWA domain-containing protein	NA	NA	NA	NA
WP_052754569.1\|56519_57974_+	protein kinase	M1HUJ3	Paramecium_bursaria_Chlorella_virus	1.7e-06	26.5
WP_035159871.1\|58038_61167_+	hypothetical protein	NA	NA	NA	NA
WP_144415958.1\|61330_62021_+\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	8.3e-20	29.5
61987:62742	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP011382

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP011382_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_1

321381-321457

Orphan

Consensus_repeat	Method
CGTAATGCTCCCTGCGGGAGAGCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_1

>merge|NZ_CP011382|1|321381-321457|CRISPRCasFinder
CGTAATGCTCCCTGCGGGAGAGCTTCGCTAACGTAATTCGTAATTCGTAATGCTCCCTGCTCCCTTCGGGAGAGCTT

>NZ_CP011382|1|1|321381-321457|CRISPRCasFinder
CGTAATGCTCCCTGCGGGAGAGCTT	CGCTAACGTAATTCGTAATTCGTAATG
CTCCCTGCTCCCTTCGGGAGAGCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035149269.1\|323058_323925_+\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|277331
NZ_CP011382.1\|WP_035149265.1\|320537_321113_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|237125
NZ_CP011382.1\|WP_035149250.1\|314839_315802_+\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP011382.1\|WP_035149283.1\|329942_330920_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035149276.1\|325602_325806_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP011382.1\|WP_035149273.1\|325396_325606_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP011382.1\|WP_035149261.1\|318723_319689_-\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
NZ_CP011382.1\|WP_035158275.1\|323966_324164_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227751
NZ_CP011382.1\|WP_035149278.1\|326009_327848_-\|formylglycine-generating-enzyme-family-protein	unknown	unknown	gnl\|CDD\|224182
NZ_CP011382.1\|WP_144416087.1\|312678_313878_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340828
NZ_CP011382.1\|WP_035149253.1\|315801_317010_+\|ATP-phosphoribosyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|237043
NZ_CP011382.1\|WP_035149271.1\|324414_325287_-\|formylglycine-generating-enzyme-family-protein	unknown	unknown	gnl\|CDD\|224182
NZ_CP011382.1\|WP_035158276.1\|327854_328925_-\|VWA-containing-CoxE-family-protein	unknown	unknown	gnl\|CDD\|226346
NZ_CP011382.1\|WP_035149247.1\|313936_314752_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238817
NZ_CP011382.1\|WP_035149263.1\|319685_320264_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|315619
NZ_CP011382.1\|WP_035149243.1\|311028_311934_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|366659
NZ_CP011382.1\|WP_035149281.1\|328963_329923_-\|MoxR-family-ATPase	unknown	unknown	gnl\|CDD\|223786
NZ_CP011382.1\|WP_035149257.1\|317933_318662_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP011382.1\|WP_035149267.1\|321631_322819_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP011382.1\|WP_035149254.1\|317563_317788_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|224069

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035149269.1\|323058_323925_+\|metallophosphoesterase	gnl\|CDD\|277331	cd07385, MPP_YkuE_C, Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	9.85668e-63
NZ_CP011382.1\|WP_035149265.1\|320537_321113_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|237125	PRK12519, PRK12519, RNA polymerase sigma factor; Provisional.	1.76991e-42
NZ_CP011382.1\|WP_035149250.1\|314839_315802_+\|DnaJ-domain-containing-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.1802e-12
NZ_CP011382.1\|WP_035149276.1\|325602_325806_-\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	7.64802e-14
NZ_CP011382.1\|WP_035149273.1\|325396_325606_-\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.23964e-16
NZ_CP011382.1\|WP_035149261.1\|318723_319689_-\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	2.35576e-156
NZ_CP011382.1\|WP_035158275.1\|323966_324164_+\|hypothetical-protein	gnl\|CDD\|227751	COG5464, COG5464, Uncharacterized conserved protein [Function unknown].	1.02142e-07
NZ_CP011382.1\|WP_035149278.1\|326009_327848_-\|formylglycine-generating-enzyme-family-protein	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	5.65722e-87
NZ_CP011382.1\|WP_144416087.1\|312678_313878_+\|glycosyltransferase	gnl\|CDD\|340828	cd03798, GT4_WlbH-like, Bordetella parapertussis WlbH and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.	3.94271e-69
NZ_CP011382.1\|WP_035149253.1\|315801_317010_+\|ATP-phosphoribosyltransferase-regulatory-subunit	gnl\|CDD\|237043	PRK12292, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional.	2.27626e-143
NZ_CP011382.1\|WP_035149271.1\|324414_325287_-\|formylglycine-generating-enzyme-family-protein	gnl\|CDD\|224182	COG1262, COG1262, Uncharacterized conserved protein [Function unknown].	2.96373e-84
NZ_CP011382.1\|WP_035158276.1\|327854_328925_-\|VWA-containing-CoxE-family-protein	gnl\|CDD\|226346	COG3825, COG3825, Uncharacterized protein conserved in bacteria [Function unknown].	7.00087e-19
NZ_CP011382.1\|WP_035149247.1\|313936_314752_+\|inositol-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	6.26774e-120
NZ_CP011382.1\|WP_035149263.1\|319685_320264_-\|hypothetical-protein	gnl\|CDD\|315619	pfam12973, Cupin_7, ChrR Cupin-like domain. Members of this family are part of the cupin superfamily. This family includes the transcriptional activator ChrR.	8.17983e-17
NZ_CP011382.1\|WP_035149243.1\|311028_311934_-\|peptidoglycan-binding-protein	gnl\|CDD\|366659	pfam01471, PG_binding_1, Putative peptidoglycan binding domain. This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.	0.00127054
NZ_CP011382.1\|WP_035149281.1\|328963_329923_-\|MoxR-family-ATPase	gnl\|CDD\|223786	COG0714, COG0714, MoxR-like ATPases [General function prediction only].	2.36333e-31
NZ_CP011382.1\|WP_035149257.1\|317933_318662_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	1.49271e-119
NZ_CP011382.1\|WP_035149267.1\|321631_322819_+\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.60235e-05
NZ_CP011382.1\|WP_035149254.1\|317563_317788_+\|ferredoxin-family-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	2.94454e-10

>NZ_CP011382.1|WP_035149265.1|320537_321113_-|sigma-70-family-RNA-polymerase-sigma-factor
MTTQTETDQAALIARIAQQDESALSELYDRYGKILYAVAFKMLGTVEEAEETVLDVFHQVWRTAQRYDATKARVDTWLFMQLRSRAIDKLRIRERMTRTPIVSLDAVEQEARSLSVDPSEEIIFSERRTLIQTAIRELPPEQQQVLELAYFQGWSHTEISTQTGIPLGTIKTRIRLGLTKLRGVLASLRES
>NZ_CP011382.1|WP_035149263.1|319685_320264_-|hypothetical-protein
MQYEEYLELAALSALNSLDENETLLLETAIADFPELSLEVRKFQEAVTSLAYSAPPVPMAVELKQRLFQRIHSNDIPPSPSVCDLTAQATEVNWEPLPQPGVMIGKLFENSQTREIGFFVNATEQTRFSNHKHARNEEIVVLAGSLIIDGKTYVSGDRIYSSPDTIHQPETPTGCLIFVKTSLDDEIIAQSP
>NZ_CP011382.1|WP_035149261.1|318723_319689_-|glutathione-S-transferase-family-protein
MTKNKSLPSKYIIKTAKFVWKTLWQTMMSNLAPRNPQGEYIRPQSQFRHTINTDSNNPYQPSKDRYRLYVGLGCPWAHRTLVVRALKALTDTISVSIVNPSPDEGFWVLNQPEFGCRTLPELYNFAQPGYQGRCTVPVLWDLQTNTIVNNESAEIIVILNSQFHDFANNQDLYPPALQPEIDRWNEKIYHTVNNGVYRCGFAQSQAAYDTACQELFTTLDTIEQTLENNPYLCGDTLTLADVRLFTTLFRFDIVYYSLFKCNIRRIQDYKNLSNYLRIIYNLPGVAETCDLESIKRDYYGNLFPLNPGGIIPQGPDMQYLK
>NZ_CP011382.1|WP_035149257.1|317933_318662_+|ABC-transporter-ATP-binding-protein
MTNNYLLELKNVHAGYIKDVDILQGVNFCVHPGELVTVIGPNGAGKSTLAKTVFGLLTPHTGTITFKGENIAGCKSNQIVKKGMCYVPQISNVFPSLTIEENLEMGAFVRNIALQPLKDKIFAMFPKLAERRRQRAGTLSGGERQMLAMGKALMLEPSLLLLDEPSAALSPILVNQVFEQIQQVNQTGTAIVLVEQNAKKALEMAHRGYVLESGRDAISGTGKDLLNDPKVGELYLGAGKPH
>NZ_CP011382.1|WP_035149254.1|317563_317788_+|ferredoxin-family-protein
MAHTIVTNVCEGVADCVDACPVACIHEGPGKNVKGTDWYWIDFSTCIDCGICLQVCPVEGAIVPEERPDLQKTP
>NZ_CP011382.1|WP_035149253.1|315801_317010_+|ATP-phosphoribosyltransferase-regulatory-subunit
MVYQPPAGARDLLPLDVTQKRWIEDRIQQVFHRWGYHRIITSTLERMDTLMAGGAIQRSTVLQLQNGEDEELGLRPELTASIARTAVTRMAGTTYPQRLYYNANVFQRMAEFRRNQPQEFYQAGVELLGGEGLLADAEVLLLVADCLQALDLKGWHLILGEAGITQSLLSVFPANLQNQVRSAIAHLDRIAIDNLPMEEELRERARTILDLRGSSQDVLAKVKSLNLDSPQQVAVDSLTSLVNLLESRGNFPVILDLSLIQTFDYYTGISFEVVSNTSLGARVIGRGGRYDQLLGQYHPQGENIPGIGFALFLEDLYQVLAASQQLPQTTPATNWLVVAETPEVYTAAFNYAQTLRDSTHLVRVEMDLGGRKAEEIRQYAGDRQIAQIAWIKADGSTVIETV
>NZ_CP011382.1|WP_035149250.1|314839_315802_+|DnaJ-domain-containing-protein
MSSKLERGLFKYDFIDHHAILCMPVDADAKDVRKRYLKIARRLHPDSNSTATDAEKKLASDLLSKLVNPAYEKLFSDKNRTEYMIVLSQMGKQFTQQSGTVELTTDLARQLAGTPNIDHAYRTAIAKIAETQFENLGQVIQIINLVSELNLVYLMRSAGKSLSAPPPPPPNPGVTSGNTGGTRTPSAPPPPPAPKEDTAVVMYIRRAEELISKNQFIPARVELQDALKLSPNNSRCHSLIGVVYLKQNQTTMAKVHFDRALQLDPQDPMALDGKRKLEKILGQKSGNAKPATATASTGAKSADKSGGSGLFGGLFGGKKK
>NZ_CP011382.1|WP_035149247.1|313936_314752_+|inositol-monophosphatase
MHNLQIFLDIATEAALAAGAVLQNYLGKVEDDITEKGRSGDLVTIADKASEAVILEYLDRHFPHHAILSEESGKLGNQDNEFLWAIDPLDGTTNFAHQYPFFAVSIGLLINGEPQVGVIYDPSHQELFRAAEGLGASCNRRPIHVSRTSELSKSLLVTGFAYDRRETPDNNYAEFCHFTHLTQGVRRSGAAAIDLAHVACGRIDGYWERGISPWDIVAGVIILKEAGGTVTAYDGKPLEIASGRILATNGYLHKSLSEELGRVNPLSSWSK
>NZ_CP011382.1|WP_144416087.1|312678_313878_+|glycosyltransferase
MQQLCVAEEPLYTKSVNTPLAYRVVLVHPSAGVNWSGGAETFAIELSRQLSQYCQIELLSGADCGHFSHPISSLTRTHSYNLLHHPLVKPLWSKFTRFPEIWLEHLTSFLPCLTYLLQNPPDLILPCNEKGGLAIASVVRALKGTPILYTEHGSFLDGGRHLQANLRFQPDKLVVLSDAVEKYVKNLRPQQSTAVIPNGVDLQRFTPDGDRLDFGLSGPIILCVASYLGRAGIKRIELAIEAVSRLPQGSLVVCGRGPDVDYYQALGEKFLGSDRFAIRTFSQKQMPQVYRSADLFTLPSFEEPFGIAYIEAMASGLPVVATDDAMRRYIIGDGGIVCDVTDIDSYSNALQTALSQSWETKPRDNAQRFDWQAIALQYRDVIMETIQRSQIPHPVLSTN
>NZ_CP011382.1|WP_035149243.1|311028_311934_-|peptidoglycan-binding-protein
MKLEQLLETNNQLAYDAIAKDIDLSKQIQSQLVNLNLLQPPVDGKFGLMSIAALKEFQELVKASEREFLGPITAKQLLEMKQEMLPQPSMNLGNDLASRIIKYMVSKNYRVFTEPKEYNIVYVEGMNENGTLNDDAPNAFNDRRMVIEFNNGVPKIVNQWQATTEPGSQYTYTPMNPGGAARIKFGQYKSWSVGMHGNGDRHEALIQVAPITVHRDFNKDFKRTNDKSDTGMFAVNQHWGYDAPQNDIKNASAGCLVGRMRQGHREFMALIKQDRRYIRNSGYVFYTTIIPGDDLVKMFPG
>NZ_CP011382.1|WP_035149267.1|321631_322819_+|MFS-transporter
MQRLNYSSRILWQQVGSLAGLLAAIMFSWMVYGYYQSQILMKLEFPFLANWLGIIQGLIAAIIEPGVGAIADKIQGKYGSKLPIISVGVVLAGLIFVASSLLLEQHLSGMVRWIVPVMMTVWVIAMIIFRGPAIALLRQFAPVEELPQANALLVMIFGLVGATSPLLDLFLKNIGASIAFILAAIALVISTYILRNFTNPRSFIPENVTEHTPPIPFLLLILLFIVGMSASLEVNLLTSLVPQILQQQLPNYSPQIICSVILLIAAILSVPLGDFASKFGSDKTILLGLISISTLMGISLINSWNFVTFLLIFAFALAFCLVFISMIPFTLTKVPASKAGLGTGFYFGGAGGATALLTLLMKQEFFNSLLGFVCSAIACIVATICIAKIHRIQAI
>NZ_CP011382.1|WP_035149269.1|323058_323925_+|metallophosphoesterase
MHWLLSGRLSVEKITVKIADLPVSLAGTKLVQMSDFHDDGKRLSEEMLEQAIAITNAAEADLILLTGDYITTNPSPIHHLASRLKNLQSRYGIYAILGNHDIYYKHPHRKPKTPAPYLGIKPEIIAAFENIGIHVLWNQIAYPLGEKLPIIGLADYWSEDFQPASVMEKIDPKIPRIVLSHNPDTAEILQQWRVDLQLSGHTHGGQIVIPGVGTVIPFYNKAIIKIPRQLRRLIPFFPSSPIKVIQHWEWTMGLHQVGNNQLYVNRGLGTYAPGRLFCPPEVTIITLL
>NZ_CP011382.1|WP_035158275.1|323966_324164_+|hypothetical-protein
MFGLSELKQTRFYQQAFAEGEQECKQEGKLLAVQPMLAAGLIVEQIAHALSLTVEDVRKAAQQSE
>NZ_CP011382.1|WP_035149271.1|324414_325287_-|formylglycine-generating-enzyme-family-protein
MAKIAINRSQGTAQFYIENLGVENLENQIQLEMMLIPGGTFIMGAPETEEGSSDYERPQHEVTVPTFFMGKYPVTQAQWEFVASLPQVNHELKPKPSRFEGANRPVECVSWYDAVEFCQRLTQHTQRPYRLPSEAEWEYACRAGTTTPFHFGETITTDLANYRGTDNEELNWSGSYGRGPKGIYREETTEVGHFGVANTFGLYDMHGNVWEWCADQWHSNYEESPTDDSAWIENNNNDNQYRLLRGGSWYLNPGYCRSAIRNNSVPDIDGNDVGFRVVCGVFSSRTLPNP
>NZ_CP011382.1|WP_035149273.1|325396_325606_-|type-II-toxin-antitoxin-system-HicA-family-toxin
MKSVSGKQLCKIVEQRGWILQRTTGSHHIYQNPDFDKILSIPVHKNKDLKIGTLKALMKIVDLVEEDLM
>NZ_CP011382.1|WP_035149276.1|325602_325806_-|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MKIKAIIHLAEEGGYWAEVPALPGCITEGDTMEEVLTNLKDAIEGWLEVANSTHSLESNAQIVEIAV
>NZ_CP011382.1|WP_035149278.1|326009_327848_-|formylglycine-generating-enzyme-family-protein
MAADAPQLKELRQQAKQTVDRFVRRFDESYRSLAYHAALPLVLTPELVNYLRNEFLRNEKVPWVAEVDLLLSDFCSQVGYELYAIDTHVRGYLLEQMKSDPRFGERRMREVAQVLYSYVNYLSRLNPGQRQQELEAQRLAAMVYLGDRECQQAAQEIARRLLEVSSGVSGANLDELGIRAELARLTRITEELAPQLQEEPSLLEYANLVQKLLRTPEDVTATEINRSYQVGELELSPAISLSLFPVVGEKLRLSQQPSSGTENVAGEKVLNLENFPPLQTCNFEIATITVEDGENIEEREYESENNPEITPEINLQLFEFEVKTIEVQKSGDNTELIINRDIQIAYSFIEYLENEGNEIALEMVQIPGGSFMMGASKNEEGIRDSERPQHEVTVPPFFMGKYPVTQAQWKFVASLPQVNRELKSDPSRFKGENRPVERVSWFDAVEFCDRITQHTGKNYRLPSEAEWEYACRAGTTTPFHFGETITSELANYNAEYTYGAGVKETYRGETTEVGSFGVANGFGLCDMHGNVWEWCADEWHDNYEGAPTDGSAWIENSKNDNHFRLLRGGSWLYNPALCRSANRSNYDPDTGAYDIGFRVVCGVFSSRTLPSP
>NZ_CP011382.1|WP_035158276.1|327854_328925_-|VWA-containing-CoxE-family-protein
MPPIDPQELTIRTFISLRSKNFKLGVGELLAAKEAIAGGFGQTPAELAETLKILWCHNRSQQEQFEPIWSSVIASIPVPQQNPPQLPERQPTKIESSPERIDPLAEITPPPVSQSILEPKAEPQLSSLPIRAPFTPAENEETSPFQTYYPITRRSLVYNWRYLRRLVADGPRNVVDIDATIDEVTHQGFYLAPVYRRQERNDASLLLLLDQNGSMTPFHRFERDLIETALYESCLEREQVNVFYFHNVPAANVYKDVYLTEPISLETVLANCSDCTSILIVSDGGAARGYRELKRIRATTSFLSKLKQHSSLIAWLNPMPEDRWIGSSAEIIANLIPMYEMDNNGLSNAIDIVRGL
>NZ_CP011382.1|WP_035149281.1|328963_329923_-|MoxR-family-ATPase
MSLIFENNPEKRSPNPHPDSPQYPEPYVVSPGLKKAVNLAIYLRRPLLLEGDAGCGKTRLASAVAYELGLPLYRWDVRSTTKAVDGLYEYDAILRLHDVQTQKVESQSARNPSNPQDYRTFGALGKAFRLEQCPAVVLIDEIDKADLDFPNDLLTVLDEPWEFTIKETGETITATYPNRTNNPIDARIDCRPIVIITSNKEKGNLPAPFLRRCLYHYLDFPNDADLLQEIVRSHYQICQENPPTSDLMQTAIKRFLNIWNEGGLFKKPGTSEFLDWLTALHQFGSEPYNAAQLAEDKLLPYRELLFKLQQDWKKYAKAP
>NZ_CP011382.1|WP_035149283.1|329942_330920_-|hypothetical-protein
MLSESERRKLTLEYADLIKEEEACSTQYRSTIDDAQKVILKRKLDDYQQKLTNLENRLYGEDSVNEANLNRRFCAIEQKLSKIDFKKQKKIIENILEDFLEYGNAIFFVNDSLYMAGELFSKEIKKILEEETTDLKYYPIAFTIGGSLDEVGFLQALAGHLGIEAIHTKDDYDSISKKINHSIENGSIIFIELNKIDLLDKKDSFLCWLLNDFCKFLNNNLIKTCHDKKIGFVRFIVLVSSDDYILDDLEECNGLDIFCDGEEFSESQIFPITLSHWSEQDIDTWLQKHSGLPTNQILSMSKSIHRSSRGGTPKLICEALRSKLS

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Crispr_ID: NZ_CP011382_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_2

1147191-1147299

Orphan

Consensus_repeat	Method
GTTTCCATCCCCTTTCGGGGAGATGTGATTGTAAAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_2

>merge|NZ_CP011382|2|1147191-1147299|CRISPRCasFinder
GTTTCCATCCCCTTTCGGGGAGATGTGATTGTAAAGTTGAATGAGGATCTGAAGTCAATGAAAGCTCGTGATGTTTCCATCCCCTTTCGGGGAGATGTGATTGTAAAGT

>NZ_CP011382|2|2|1147191-1147299|CRISPRCasFinder
GTTTCCATCCCCTTTCGGGGAGATGTGATTGTAAAGT	TGAATGAGGATCTGAAGTCAATGAAAGCTCGTGAT
GTTTCCATCCCCTTTCGGGGAGATGTGATTGTAAAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035150532.1\|1162431_1167717_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_CP011382.1\|WP_035150525.1\|1149818_1152485_-\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234
NZ_CP011382.1\|WP_035150517.1\|1137646_1138714_+\|dTDP-glucose-4,6-dehydratase	unknown	unknown	gnl\|CDD\|224013
NZ_CP011382.1\|WP_035150519.1\|1141295_1141709_+\|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl\|CDD\|223149
NZ_CP011382.1\|WP_035150527.1\|1153640_1154768_-\|DUF1822-family-protein	unknown	unknown	gnl\|CDD\|370155
NZ_CP011382.1\|WP_082127256.1\|1141902_1142556_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|153251
NZ_CP011382.1\|WP_035150510.1\|1135177_1135966_+\|multidrug-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226953
NZ_CP011382.1\|WP_082127257.1\|1142552_1143563_-\|phosphatidate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|226955
NZ_CP011382.1\|WP_035150523.1\|1147427_1148639_-\|TniQ-family-protein	unknown	unknown	gnl\|CDD\|377670
NZ_CP011382.1\|WP_035150521.1\|1144357_1146538_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173820
NZ_CP011382.1\|WP_035150535.1\|1175588_1180676_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP011382.1\|WP_035150520.1\|1143564_1144170_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|223632
NZ_CP011382.1\|WP_035150522.1\|1146776_1147049_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_082127420.1\|1140128_1140488_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035150529.1\|1155568_1156735_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|274357
NZ_CP011382.1\|WP_052754384.1\|1148628_1149819_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379165
NZ_CP011382.1\|WP_035150530.1\|1156894_1162246_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_CP011382.1\|WP_168163419.1\|1153389_1153551_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035150513.1\|1136007_1137366_-\|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	unknown	unknown	gnl\|CDD\|223841
NZ_CP011382.1\|WP_052754386.1\|1168003_1175143_-\|PAS-domain-S-box-protein	unknown	unknown	gnl\|CDD\|226415

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035150532.1\|1162431_1167717_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0
NZ_CP011382.1\|WP_035150525.1\|1149818_1152485_-\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	6.88806e-09
NZ_CP011382.1\|WP_035150517.1\|1137646_1138714_+\|dTDP-glucose-4,6-dehydratase	gnl\|CDD\|224013	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane].	0
NZ_CP011382.1\|WP_035150519.1\|1141295_1141709_+\|Hsp20/alpha-crystallin-family-protein	gnl\|CDD\|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	1.17902e-26
NZ_CP011382.1\|WP_035150527.1\|1153640_1154768_-\|DUF1822-family-protein	gnl\|CDD\|370155	pfam08852, DUF1822, Protein of unknown function (DUF1822). This family of proteins are functionally uncharacterized.	1.10245e-105
NZ_CP011382.1\|WP_082127256.1\|1141902_1142556_-\|1-acyl-sn-glycerol-3-phosphate-acyltransferase	gnl\|CDD\|153251	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like. Lysophospholipid acyltransferase (LPLAT) superfamily member: acyltransferases of de novo and remodeling pathways of glycerophospholipid biosynthesis which catalyze the incorporation of an acyl group from either acylCoAs or acyl-acyl carrier proteins (acylACPs) into acceptors such as glycerol 3-phosphate, dihydroxyacetone phosphate or lyso-phosphatidic acid. Included in this subgroup are such LPLATs as 1-acyl-sn-glycerol-3-phosphate acyltransferase (AGPAT, PlsC), Tafazzin (product of Barth syndrome gene), and similar proteins.	1.52342e-36
NZ_CP011382.1\|WP_035150510.1\|1135177_1135966_+\|multidrug-ABC-transporter-permease	gnl\|CDD\|226953	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only].	1.68264e-86
NZ_CP011382.1\|WP_082127257.1\|1142552_1143563_-\|phosphatidate-cytidylyltransferase	gnl\|CDD\|226955	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only].	7.27517e-118
NZ_CP011382.1\|WP_035150523.1\|1147427_1148639_-\|TniQ-family-protein	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	4.73435e-13
NZ_CP011382.1\|WP_035150521.1\|1144357_1146538_-\|S8-family-serine-peptidase	gnl\|CDD\|173820	cd07496, Peptidases_S8_13, Peptidase S8 family domain, uncharacterized subfamily 13. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	6.44815e-46
NZ_CP011382.1\|WP_035150535.1\|1175588_1180676_+\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.39201e-100
NZ_CP011382.1\|WP_035150520.1\|1143564_1144170_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	6.82008e-18
NZ_CP011382.1\|WP_035150529.1\|1155568_1156735_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.48047e-11
NZ_CP011382.1\|WP_052754384.1\|1148628_1149819_-\|AAA-family-ATPase	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	8.12932e-05
NZ_CP011382.1\|WP_035150530.1\|1156894_1162246_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0
NZ_CP011382.1\|WP_035150513.1\|1136007_1137366_-\|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase	gnl\|CDD\|223841	COG0770, MurF, UDP-N-acetylmuramyl pentapeptide synthase [Cell envelope biogenesis, outer membrane].	6.21795e-161
NZ_CP011382.1\|WP_052754386.1\|1168003_1175143_-\|PAS-domain-S-box-protein	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0

>NZ_CP011382.1|WP_035150522.1|1146776_1147049_-|hypothetical-protein
MPLYTYVVNYKGDTYVGQDKKSNFKGFVSSWTSEIPSSALKSLTPQLAQELKKLAYSDDFIPVAGRTNVWRKTILLDDSEFVVIAVQTET
>NZ_CP011382.1|WP_035150521.1|1144357_1146538_-|S8-family-serine-peptidase
MNRQLAVSSILLASTMLAVTSIFPLTAINRQFKSTAAAQTPESQNNQLFYLYQGKPVPLTQQKDAIAVEFKPVSNARNRGANPLYLQLEQDLAKGAGTRGGSQIQVKPLGGNYAVVALPAVNADAIRQKIKNQSYVKTSLPVLSRASSQDTIILPNEIIVSFQPNMGEKERASILKQNNLEIIRPLRFLPNIYIVKSTTVTDTAVLNVANQLNQVKGITSAAPNFLQSVADSVDITQQKSQGLNLDSGEKQSANATQRGNKSSSTYLGLQWHLNSAPLQTCLQQKINNFAELQSCLQEQSVKEKQTKPPVTLPRTDLRVTEAWQNSNGGKGVVVAVVDSLIQWNHPDLQNNLYKVSAADKCPGEEYGWDFSEPSNSKNPCEIGDADTKMSPLEMNILRKKLQDTFKLSDGELIKRYLSPQQIAKINPQLSQKQIGDRLRTMLRSQVGGEFHGTLVSGVIAAKPQTSEGMWGVAPNAKILPVRVFGLNGSIQNGAVLEAVAYSANRGADVINLSLGKMIPTDVEDMTYKQILQQNPKLVIVASSGNSNYPRVGFPSGYEGVLSVGATNLFGDRAPYSNYGMGLGVVAPGGDLSTSVGLLGGIATTGGTWMESFWQGLAYPNFRWSEVVDARGKYWWMQGTSFSSPAVAGVVALMKGEDGDRRLNRQQIINILKSTASYDSLRVSQKEKEKYRSLVNEGLISSGMTEQQVFFGSGLINADAAVRAVKK
>NZ_CP011382.1|WP_035150520.1|1143564_1144170_-|CDP-alcohol-phosphatidyltransferase-family-protein
MRSLYELKPTFQNQLRPLVNQLAHRGVTANQVTIFATILSIFAGITITIGHEYPQLLLIIPPLMLIRMALNAIDGMLAREHGMKSILGGILNELTDVISDAFIYLPFALIPGITSPLVVVIVILAIISEMAGILGVVAGGTRRYDGPMGKSDRAFIFALISLLLGCGIISGTWLNILFAMTIILLIINIINRVRNTLAEVS
>NZ_CP011382.1|WP_082127257.1|1142552_1143563_-|phosphatidate-cytidylyltransferase
MNINNYLTETSTLQSIITGLFHLPPPNVLWAFAGIFTLLIIASIVIAILALRQPETDYTELKQRVQSWWIIVILFTIALTVNKSIAIIFFAFLSFLALKEYFSLIPTRIEDRRVIFWAYLGLIIEYYWIHINWYVMFLIFIPVYMFLFLPMRMVIIGETEGFLKAVGTIHWGLMLTVYCFGHMAYLLMAPAEVNPVAGGAGFILYLVFLTQINDIAQYIWGKSLGKHKVLPTVSPNKTWEGLLGGIFTTTVMAVIIAPWLTPFPPLYALSVGILIGVAGFIGDVTISALKRDLGVKDSGNLIPGHGGILDRIDSLTYTAPLFFHFTAYFYFQSLLR
>NZ_CP011382.1|WP_082127256.1|1141902_1142556_-|1-acyl-sn-glycerol-3-phosphate-acyltransferase
MKIFLTRLLRLIFFLIIVRVVILIIIGLRIVNKEGLPQSGPAIIVANHNSHLDTMVLMTILPIKLLNKLRPVAAEDYFLKNSLLAWFSLNILNIISLKRQNINSRENPFLSCSEALLQEDILIIYPEGSRGKPESLSTFKSGIAHLAKNHPDVPIYPIFMYGLGKVLPKGEALLVPFFCDVFVGDKIFWTGNKKSFMDLLNQRIQDLASEKKLPSWE
>NZ_CP011382.1|WP_035150519.1|1141295_1141709_+|Hsp20/alpha-crystallin-family-protein
MTIIRYNPWAEFNTVQRQLDRLFEDLQAPNLRTPAAELTETEDALHLKLELPGIEAKDVDIEVTTNAVKVVAERKNERKEGTRSEFYYGKLQRIIPLNTKVQNTNVTAEYKNGILNLTLPKVEEEKNKVVKVSLEQN
>NZ_CP011382.1|WP_082127420.1|1140128_1140488_-|hypothetical-protein
MEELKIVRNREDLMGLSGKKVKLVGYYTSQSYKPQVTGNPDFQGVYIKSQIVLEDGTVVNIFPSWNKQSLRSPSEAQKYTGKIVQGIGVVEFEATSRMINSQIRESVIYLEELNFTVLP
>NZ_CP011382.1|WP_035150517.1|1137646_1138714_+|dTDP-glucose-4,6-dehydratase
MNHRRLLITGGAGFIGTNFVYHWLQNHPGDRVVVLDALTYAGNRANLASLETQENFRFVQGDIGDRLLIDQLLSQEKIDTIAHFAAESHVDRSILQPGAFIQTNVVGTFTLLEAFRQHWEQQKQPSEYRFLHVSTDEVYGSLNPTDTPFTETTPYAPNSPYSASKAGSDHLVRAYYHTYNLPTIITNCSNNYGSYQFPEKLIPLMCINILQGKPLPIYGDGKNVRDWLYVGDHCSALDIVINQGIPGETYNIGGDNEVENIKLVEMLCTLMDELAPELPVSPSSKLITFVKDRLGHDRRYAIDASKITNQLGWQPSVTVEQGLRLTVKWYLSHFEWWQALLSEDYQAYYQQNYQK
>NZ_CP011382.1|WP_035150513.1|1136007_1137366_-|UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D--alanine-ligase
MAFSATLNQLIHVLGAKSVNLSGDTGTEVITGIQTDSRIIQSGEIFVAFRGEKFDGHDFVSTAIAKGAVAAIVDFDYNHPQFPLLQVENTLTAYQQLGRWWRDRLSIPVISVTGSVGKTTTKELIAGVLATQGRVHKTYGNFNNEIGVPKTLLELTEEHDFAVIEMAMRGRGQIAELTQIARPTIGIITNVGTAHIELLGSELAIAEAKCELLVEMPSESVAIMNYDNPLLRQVAAELWQGKVISFGFEGGDIQGTMVDSQTLKVADQEFILPLPGRHIAANYMAALAVARVLNIDWASLQSGIVVDMPGGRSQRYTLPNDVVILDETYNAAPEAMIAALNLLAETPGKRRIAVLGAMKELGERSPQLHQRVGETVRQLNLDALLVLADGEDAATIASSAQGIPTECFSNHGELVAGLNSFVQPGDRILFKAAHSVGLDQVVNQFRGKFAPV
>NZ_CP011382.1|WP_035150510.1|1135177_1135966_+|multidrug-ABC-transporter-permease
MNKILKTATTLLSVYYAYMVEYRAELILWVLAGSLPLILMGAWVQAAQGGNFGFTSVEFARYFLAVFIVRQITVVWVIWEFEREVVEGKLSSRLLQPLDPVWHHVASHLGERIARVPFAIILIGLFFLIYPQAFWIPKITNIILFIIATILAFTLRFVIQYTFAMFAFWTERAAAIENFWFLFYLFLSGMIAPLDVFPPQLKAIILCTPFPYLIDFPASLLVGFNVDITRGFLSIIAWILIFVGVNRILWRQGLKKYSGMGA
>NZ_CP011382.1|WP_035150523.1|1147427_1148639_-|TniQ-family-protein
MLSDNFNFQSPDFTQQLNLPKRSHLYPLQPLLLGTPLTESFTSYVTRLAAIHRVPTGVLLAQELAPTISRYPVKNSNHLSNLFFHAFFSQTGAWNGTGTMALEPVLVLQKLTQQPNLKYLTLIHWQNVLSTRNLLRKYKAWCPLCYSESSQKGIMLYEPLIWCVSAVKICPIHKYPLMNYCPNCGQHIYLLAWNTKNGFCCRCHYWLGSSCSTIELYNVNRQDIEWHSFIAQQVGLLIANTPYLIEIPKREFVAIAIDKCIEVLTKGNAKAFAQEMFLSSTVPRDWRVGNALPQLDKLLRVCYRLSIPLIDIYLGQLKLDAPIYLKELPLSEQYFKTNRPFDAQMVQEFLEQHQESFPPQSLKELALQIGYDSRDLYKYFPDLCHEISTRYKLYKPKSSKPHV
>NZ_CP011382.1|WP_052754384.1|1148628_1149819_-|AAA-family-ATPase
MHSTSDISQEILTASDNEKINYFINFTVVHRLLKQVYEEFLDAINNPGGASLIFLFGPTGVGKTTLMAQVMKIIFEQNQALMIQDLSFLPIAGVEARSPDTGSFDWKVYYKSVLIALSEPFADYKTRTGSHRVYGNGGEQKTVKVKPNLVDLRADVEHIFQQRRLKVFLVDEAQRFAKITSGHKQQDQMDAIQSMASFTQTRHGLFGTYELLQLRNLSGQLSRRSIDIHFPRYQSENPEDIKDFQRVLKSFSFAMPLPETPDLEKHWDYFYERSIGCVGIVKDWLTQSLRKALSESSNCLSYKHLQAYAPAVSKSVRMLTEAIEGENILSSGENQVEKLRSSLGLVVRDNQNISVRDTSSHHNLSTSAETKNNRKKRRPGERKINRDIVGGGGNAL
>NZ_CP011382.1|WP_035150525.1|1149818_1152485_-|DDE-type-integrase/transposase/recombinase
MLTESELEEWSASLDLSSAQYTIIQSIRSSPPSRRVRGNAGNVVGRYPSKKMGVVIQFESHHNELARIYEMEYDPDVLEYYDQPPKIKLQYTCLNGRRIGVLHTADFFVIRSKSAGWEECKTASELSALASKMPNRYQLDSNGKWRCPPGEEFALNLGLYYVVRSDKEINWKKQRNIYFLSDYLSINLEVPREDIVKIIKIISIFPGIKLSELLEKGINPDYIYKLIADQTVYVDLDSFSLSTELERISVFVNKETAEALDISRNDIAWSPRKFLDLSHVGAIGKWDGQIWHVINVGEKSISLLSESSQIISLPNQEWRRLIEQDKFQAISNTQNSQDIQEFFKCSSVEDCIEASRRYSIISGYLQGEKADFTEVPRRTFYRWVRKWLEADKQYGCGYLGLLPKHKNQTANQGKLPVQTQKLIDEFIENDYLNVKQKGKYATYCSLRQTCIDKGLIPPSYKTFLKNLKKIPQFETKLHRQGKRIAYKNECFYWELELTTPRHGDRPFEICHIDHTELDIELVSSYSKVNLGRPWLTFLIDAYSRRILAIYLTFDPPSYRSCMMVMRECVRRYGRFPSTLVVDGGKEFESIYFETLLAAYTCTKKTRPQAKPRFGSVCERIFGTANTMLIHNLQGNTQITRNPRGVTKSVNPKNLAIWTLGSLYQNLYDWAYEFYDNKEHPALSQSPRSMFEDGFLRTGLRSHKVIKYDGNFKIFTLPTTPKGTAKVIPNNGIKINNIYYWHNIFRHPEIEKTQVPVRYDPYDMGVAYAYVDNQWVTCISQHYSSLVGHSEREIRIASEEIRQRHSCANRQFVVTASSLAEFLNKSEQQEVILLQRMQDIEAKEIYATTPNNQTPVIQTTMIEMLELPIQEPEEKELIAEDIKPYEEFW
>NZ_CP011382.1|WP_168163419.1|1153389_1153551_-|hypothetical-protein
MAIELRSTKAAIGFQPAEAAIAYHLPFLTNHPPTFGNFVKKYMGYIACGVRIW
>NZ_CP011382.1|WP_035150527.1|1153640_1154768_-|DUF1822-family-protein
MHHLLLEIPPDGQNQAWEQSQTCSHSTSRYQAYINRLCWDAVFPWLQTDVTPQAKSMTSTTALPSFWELVNGFDITADGVRFILVPSENIDLEEFRVPQEWVDIPNWVGDYYLAVQVETDDNYVRVWGYSTHNQLKNLGKYDSSDRTYSLDADHLINDITILTLTPPETTRTPLSPLPQISIPQAHNLINRLGNPGIIHPRLEIPFPIWGGLVSHDGWRQNLYCQRTAQTEPFSVYEWLENGISRFAQQLGWQAVNLQLSTASARSTETIPHTTILSRQLTIAGQPYTLQLIPRREGDMVIWRFTLQHHAVGALIPGGFILRLLTEDLQDFENNQGIATTATEQLYVEVALEPAEGIIWEVTPLPENYQREILRF
>NZ_CP011382.1|WP_035150529.1|1155568_1156735_-|sigma-70-family-RNA-polymerase-sigma-factor
MHPRSNNIEIFSTFLLLDGNRLQQWVTDGRLRQSMQRVLQESPQEYGENFWAIYWHKLWQSQSRNLPQAHLTAYLQEACFWVARKTANNLTSTQYKLADCFQIAIAQVEKILKGFNPQQGFSLKNYASAIFITVIRENLRQSHEMDICSEWGLLRKTSQKRLQEALQAISLPRDTITNYTSAWQCFKSLYAPTQPQGSRKLPPPDAATWEAIATAYNQKNSENITPQTLETWLLNIAKALRRYLHPPVTSINISTSGETGNELIDNIPSNQQESLLSEIITQEEESNRDKQQAEIHQLLTTALTQLEPQTQEILQLYYTQALTQQEIAQKLALQQYTVSRRLTKTRETLLKTLAQWSQQTLHISLNSDILKSINTVMEEWLQGYFGKE
>NZ_CP011382.1|WP_035150530.1|1156894_1162246_-|AAA-family-ATPase
MISSTTTFPQSFPEISGYRLTQQIYLGCRTVVYRGVQTATQQPVVIKVLRREYPRFDELVQFRNQYTITKNLTIPGIIHSLSLESLDSGYALVMEDWGGIDLAKYLERQSLTLPEVLEIALQLTEILHELVQHRLVHKDIKPANILINPESKQIKLIDFSIASLLPKETQEIQSANTLEGTLAYLAPEQTGRMNRGIDYRADFYTLGVTLYQLLSGKLPFESDDPLELMHCHIAKQPLAVDQVNPEVPAMVAAIVSKLMAKNAEDRYQSAMGLKHDLHHCLTQWKTCGEISKFELGQQDLSDRFLIPEKLYGRETEVKTLLAAFDRVAGNSQSHPNPKSELMLVAGFSGIGKTAVINEVHKPIVKQKGYFIKGKFDQFNRNIPFSAFVQAFRDLMGQLLSESDEQLEQWRTKIHLALGENGQVLVEVIPELEQIIGKQPPAPELSGTAAQNRFNLLFQKFIQVFTTPDHPLVIFLDDLQWADSASLQLLSLLMNEGSYLLMLGAYRDNEVSPVHPFILMVEELNKTEAIVNTITLAPLAFADTNRLIADTLKCSLELAQPLTQLVERKTQGNPFFTTQFLKALYEDGQITFNRVRGNSENGNSCYWECDIAQVNALALTDDVVEFMALQLQKLPAETQLVIQLAACIGNQFDLATLAIVCQQSPTETATALWRALQEGLLLPTSQMYKFFQETEQVDSNHVANPIYRFLHDRVQQAAYSLIPEDKKQVTHWKIGQLLLQGTSQAQQSEQIFDIVNQLNLGRATITDSQQKYQLAQLNLQAGQKAKLSAAYQAAQNYCEIGIDSLPDQAWQLDYALTYALYRDGSEAAYLSSDFDRAETLYTQALAQAQTSLDKATIYRVQMTQYQLQGRNAEAIAIQRQSLQLLGWTMPTEPEQIQASLDEQIAIVNRYLEQQPIVSILELPKMADSNIAEMLRILQILFYAAWLDGQGTLALLALAKMTTLSFQYGNSDMSPFGYVGYGLIANALLKDAHQAYQFGDTAVQLCEQFDNADVRGMTNFLFAADVHSWSRPLQAADKYYDNAFTYGMDAGNWLTVGFMMMQSGSDRLTYGKNLDDLYAIAQTHVGFLRQIKSLENLDALTVGVLQPLRQLLGLTTNVLSFDDESFSEAEYLQKYHDTPYHLAWFYSVKIRHAYLFNQQTTYLTLIPQLTIIESTVPSHAKVPSSVFYVILMHLALVETAQNEADREFHWQAIIPLEERLTRWQQDCPANIQHKCLLIQAEKARLKGQKLEAIDYYDQSIAQAQAEGYGYEAAIANELAAKFYLAWGKEKVAAGYIQEAYYCYAHWGARAKTNDLEKRYPNLLQPIFQSTAIPLNLLDNLATITPIESIHNRTNSSSSSSSNINNILDFASILRAAQSLSGIIEIGELLHQLTQIILKYSGGDRCAIILPDSNNGWQVEALGTSETTTLVNEPLIGNPHLPVKLINYVKNTQGTVVIDNLDTDLPVIDNYLTQQQPQSLLCLPLLNQGKAIAILCLENQITSGVFSRNRLQILNFLSTQAAISLENAKLFRDRKAYEEELEQTNAELIRATRLKDEFLATMSHELRTPMNAILGMTEALQEEIFGEINAQQLQALATVERSGNHLLELINDILDVSKIASGQIELDCQNTAIIPLCQQSLEFIKPQAAKKSIQLVSKLPTNLPDFNLDERRIRQVLINLLNNAVKFTPEGGCITLEVIYPTTIKQQNYLQINVKDTGIGIAPENLKKVFEPFIQVDSALNRNYEGTGLGLALVKRIVEMHHGEVTLTSELEVGSCFAIALPYVSK
>NZ_CP011382.1|WP_035150532.1|1162431_1167717_-|AAA-family-ATPase
MISTQVSLPGYHVREIIYEGSRTVVYRGNRETDLLPVVIKLLKNPYPSFKELVQFRNQYTIAKSFNFSGIVKVYSLENYQNGYMLVMEDFEGISLSEWMGKSPLSLLDFLQIAISLCDILDILSRKRIIHKDIKPSNILINPHIKEVKLIDFSIASLLPKEVQNLKNINVLEGTLAYISPEQTGRMNRGIDYRTDFYSLGIVFHEMLTGKLPFQSEDIIELIHSQIAKTAPLLHEINPQISTVISEIVSKLMAKNAEDRYQSVWGLKFDLEKCLVQFQDKGKIESFIIAQRDLCDRFIIPEKLYGREAEVKSLLAAFERVSQGATEIMLVTGFSGIGKTAVVNEIHKPIVKQRGYFIKGKFDQFNRNIPFSAFVEAFRDLIGQLLTEGDAQLQIWQQQILTALGENGQVIIEVIPELERIIGKQSPIAELSGTAAENRFNLLFQKFTQIFTNQQHPLVIFLDDLQWADSASLKLIQRLIADTRHLFLIGAYRDNEVNSAHPLMLTLREVKKSSAIINQINLAPLSQLQVNNLVADTFKCSELLVGKLSKLVFQKTQGNPFFVTQFLKSLYQDQLIQFNFDLGCWESDIAQVSQLAVTDDVVAFMAFQLRRLPASTQYILQLAACIGNQFDLQTLAIVSEESQIETASHLWKALEEGLIVPTSNIYRFYVGEKNSITNTDIQDIQETFTYKFLHDRVQQAAYSLIPSNQTPKVHLQIGRLLLNRTPKVERESQAFNSQIFQIVNQLNCGIPLIENAKEREELAELNRRAGEKARFSSAYDAAMSYLNLGLELLQSQAWEHQYFLCLGLHQLAAEVAYLSADYDRMTKLIVIGLDRAKNDIDRVKFYETQILAFVAQNQPREAVDYARRVLRQFGVRLPQNPSPLRTMLGFFATLYRMSKKKPEGLLKLPPMTNPSKLAACQIFNAVGSAAASGMPEMLPFITFNGLSLYLRYGNIPKSSMGYIIYGYLLCEKLGWVDAGYAIGKAAIALSQQNSSQEALAPTLFLWHHFIAYRKELLHNTSALLLEAYQAGLAVGDIEYAAYSLVIYFTQAYWTGKNLADLQQEAIASRTNLQRLQQLIILDIYNLNCQVVENLCSGSNDVCELVGDFFDETAIPVDDVRLTVHTSFRKLQLAYLFDRHILATEQIAIIEANLDPLNGTFVKVMFYFYSALVWLARYPDLSKKQQKACLRRIKTARRNLSKFAKYAPTNYQHKWLLVEAEYLRVFKKSTQAGEYYDRAISLAKTNNYIQEAALANELTAKFYLHCDRENIACVYMQEAYYCYTKWGAKAKTDDLSERYPHLLQPILQPKPQPGNLLDILATITTPDLSISESTESSKLSGKNINQALDFAAILTASQTLASKIELDELLRQLSQIILKYSGGDRCGIILPNQDHIWQLEALATPETVEIASFPLEGNIALPVKLINYVKNTQEAVVIDALNTELPVIDDYLYQQQPQSLLCLPLLNQGKAIAILLLENQITSGVFSHNRLQILNFLSTQAAISLENAKLFRDRKAYEERLEKNNAELIRATRMKDEFLATMSHELRTPMNAILGMTEALQDEIFGEINAQQLKALATVERSGNHLLELINDILDVSKIASGQIELEYQSTEIIPLCQQSLEFIKPQAAKKSIQIVSQLPTNLPNLNIDERRIRQVLINLLNNAVKFTPEGGCITLEVIYPTTIKQQNYLQINVKDTGIGIAPENLNKVFEPFIQVDSALNRNYEGTGLGLALVKRIVEMHHGEVTLTSELGVGSCFAIALPS
>NZ_CP011382.1|WP_052754386.1|1168003_1175143_-|PAS-domain-S-box-protein
MDSTQVNILGYRIHETLYDGSKTLVCRAFREADNLPVVIKLLKNSYPDFSELVKFRNQYTIAKNLNHPGIIQTYSLESLQNCFMLVMEDFGGISLKSYFSHRETRFIPSLEEFLQIAISLCDTLDVLYHQRIIHKDIKPTNILINPDTRQVKIIDFSIASLLPRETQTLISSNILEGTLSYISPEQTGRMNRGIDYRTDFYSLGVTFYELLTGELPFHSEDAMELIYFHIAKTAPLVNEINQQIPTVISEIIRKLMAKNPEDRYQSALGLKYDLEKCLMQFQETGRVEDFPIAQRNICDRFIIPDKLYGRETEVQTLLEAFVRVASPNGATEIMLISGFSGIGKTAVVNEVHKPIVQQRGYFIKGKFDQFNRNIPFSAFVQAFRNLMGQLLTESDTQIQLWKHKILEAVAENGQIIIEVIPELEKIIGKQPLATELSGAAAENRFNLLFQSFTQVFASDKHPLVIFLDDLQWADSASLKLIQLLISNTHHILLIGAYRDNEVNAGHLLMLTLNDIHKAKITINRIILAPLSPTTVNILVSETLQCSNNTVWKLSQIIHKKTEGNPFFIVQYLKALHQDKIINFNFDLGCWECDITLLKYQNITDDIVGFISSQVQKLVPLTQNILQLAACIGNQFDLETLAIISQQSQSDTAAILWEALQEELILPVDEIYKFFVGQETSVGTWGNTHTVTYKFLHDRVQEAAYSLIPDHQKQATHLQIGRLLLKNTSPERQEEKLFTIVNHLNMGSTLITQAQEREHLAKLNLTAGKKAKISHAYSAAIAYLEQGIQLLPNDCWDRLYSLTLALHKEITNVSYLNSDFAAVEKWSSVVCQEAKTLIDTIKVQQNRIIAANVQGKLFDALQIGLSFLRSLGLEFPEQPTQEDIAQAFGRTRSLWADKPISSLLDLPPLNDTHLLAQMEILTVLSSTAYVAAPSLMPLLIFKQVEICIQFGNCPISVFTYSDFGVILCGVIGDIESGYEFGELAINLRERWQLSSFKSRTLFVINYFVKHWKTSLSQIVPSIEEAYQSGIETGDVESGILNAGIYCFCAYYQGQVLTELLPKMDAYRQIIINHKHLHCLFLQSITHQTMINLLGRNQEPDRLTGDIFDADTLLPQIQANNYRSVIAHWQLSQLILYYLFNKNDEAARISAQALEYLDGATATFGIVLYSWFDALNQLQLYPNLDPAERQEILQQIQQQQDKLQHWANFAPTNHQHRWELVTAEKNRVEDNKIAAIEYYDRAITSAKTNGFIQDVALANELAAKFYLAWGKEKFAAIYMQEAYNCYKQWGAKAKTQDLAQNYPQLLISVLAPVQGAVVSTAHISESAREFSATLDLNTVLTANQALSREIHLDQLLQNLIQLVITNAGASKAALFLNCDGSLELGVLYFDHAVQSLERKPLDSCQYLSHRLIRYVERTLETVITDFKTHVSTTNDPYCLQFRPKSLLCTPILNQGQLVAVLYLENSITAEVFTNERVELLKLLCSQAAISLANARLYEQSQSYAQQLERSLQKLSESQSQFQALAKNIPGVIFKVSVNLKDGSESIPYASSGCYELYGVTAESFMAGEYFFRDFEHPEDYPRIEQAIQKSIKHLTPLREELRIITKTGEMKWIQIVAQPQILPGGFIVSDGVLLDISERKQAEAALGESEAKFRGLVEGVTDVIWSSNTDGTLTYLSPQFQTLFGWNPADWIGKSFSTLIHPDDLQETMESSMATIIQGKKLSNQEFRHLCHDGSYLWVTVNAGPIFDADGNITRHQGIVRDISDRKQAEIELEKSRQKYYSLIQSVNGIVWEYDLQTNRFTFVSNKAEQILGYPVEDWLNEPLFWKNHVYAEDIEVEKSFDEAIQNQSGCEFEYRMVAADGSLVWIYDISSPNFDENGNLTSSSGVLIDISDRKKLEEEQSRLMDILEATPDYIGLASVSGKIIWHNKQLRELRQDLISHKNISECHPAWVNEIILNQVFPILMEQGSWSGELALLDSNGQEIPVSQVIIAHKSQSGEVQYISTIMRDISEQKAAEKQLILTKFAIESTVTSIFWISEQAGFIDVNDAACTALGYSAAELKQMFVWDIDPNVSKEAWAERLEILKLSRYERFETLHRSKDGSIYPVEITSNYLEYGGVGYIFAQGQNISDRKAYEERLEKNNAELIRATRMKDEFLATMSHELRTPMNAILGMTEALQDEIFGEINAQQLKALATVERSGNHLLELINDILDVSKIASGQIELEYQSTEIIPLCQQSLEFIKPQAAKKSIQIVSQLPTNLPNLNIDERRIRQVLINLLNNAVKFTPEGGCITLEVIYPTTIKQQNYLQINVKDTGIGIAPENLNKIFEPFIQVDSALNRNYEGTGLGLALVKRIVEMHHGEVTLTSELGVGSCFAIALPL
>NZ_CP011382.1|WP_035150535.1|1175588_1180676_+|hypothetical-protein
MSPIGITTSNLSSVKKSPTPKLWLLILGVSQYQDTDLPNLTYPSGDCQGLAKALVEATQGLYSTELKIYHDFSPLIPTLENILTTLEDIRQSAQNTDTILFYFSGHGIVDNSTQQVFLCLQNTKKSNLLQTALPLPQLLQLLNQCAVKNQLIWLDACHSGGMTLRGANPTPQLIATLQKCASQTQGFYALLSCDNHQQSWEFPELGHGVFTYFLMQGLQGAAADNQGQISIDSLYRYVYHKTLQYIDKTNQQIRLINQQKRGKGEAQLFQEYPLQTPKRIVEGVGEFILAKKAGLWKNSLSRRCGLLIEGRGTNSLSLDISKKITSIGQFKLEYLSGNRLSMGEIPTIIETCCQTPELETVLIYLRGKVSETETGEYLIFGNDIFLKRSWLKQILRHCHGKQIIILDIIATSDNISGQIWVDDLQIDSQSGQCIMAAISPPEQPDLFAEVFLDTLQSATTTEGLSAAGAIAQLQLKLAGSSIPLNIWLSGSQGIIEILPPQAENPEENTALDLGVCPYMGLSAFSEADSQYFYGRETLTQQIIHHLTHHSLTAVIGASGSGKSSLIQAGVIPQLRHGKQIPHSQEWFIATMRPGATPLVELAKVLPASSSLLEGFIYQGVESFVYWLRSLSYPVVLLFIDQFEELFTLCPAPEREKFIQLLLGIREYAGDRCKIIITLRADFIASCLEFADLATVLQTTNILVSPTLTLDDYRRVIINPSQQVGLRVEPELVEVLLRELNSSPGDLPLLEFVLEQLWQNRVEGELTLQVYQEKLGGLQGTLELSCQQVYGNLEREIQDCAKWIFLSLTQLGEGTEDTRRRVYKSELIVTKYPQQLVEQTLNILTAAKLIVMNVETTTIGSEKGEETANSTIIPSNITVEVAHEILIRHWSTLRWWLEENRSRLRSQRQIAQAAQLWYQHQEQPDFLLQGVRLAEAEDIYIKYTDELSQDVQQYIAACLAQRKQQQFLEKQRLKQAQRAVVALSIFGVVAVSSGGLAYWQSREAVLREIQALNSSAQANLLSHQQLEALLTSVRAAHQLKRVISTPQNIQSSTINILQRNLNNIQEKNRILAHDANITSIDISSNGQNIASASDDGTWKLWTHHGKLIQKITAHQAPIKSLSFSPDGEMVATASFDKTVKLWRVRDGSLLRSFTGHQAEVLSVAWSRDGQFLASSGADNLIQIWQPDNGNLVKTITTQSAIINSITFSPDSQTIAAANSNQTLTIWRVKDGNLIKTIPAHSGEVYTIAFSPDGQTLASGSADKTIKIWQVRDSKLIHTFTAHSAEVKSVNFSPDGQSLVSGSLDSTIKVWNLADGTLLENFSGHSIGIFSVKFFPNGQNIISGSADKTIRIWQRNNPLQKTLTGHTGEIFSVNFHPQGNLLATGSSDTNIKLWNIPAGNLRQTLLGYQKSIYGHSSPIYSTVFSPQGDILASASKDYYIKLWRVADGYMIKTLQGHEDSVNSLSFSPDGKFLASGSDDQTVKIWQVYQHTLVKTFRGHNNQVLTVSFHPQGHLLASGSRDNTIKIWRVADGKLLQTLTGHSNTVNGVVFHPQGKILASASSDKTVKLWYLEDIATAKFNPQPQTLTGHSDSVWGVNFSPDGEIIASASSDKTVKLWNLAGQELKTLQGHSDTVFGVALQNQLLASVSFDGTGKLWQLNRRELQTADLDHLLVRSCRWLGDYLDNHPQENQPEKVCP

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Crispr_ID: NZ_CP011382_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_3

1992659-1992750

Orphan

Consensus_repeat	Method
TCTTGTCCCAGATGTGTCCCAGAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_3

>merge|NZ_CP011382|3|1992659-1992750|CRISPRCasFinder
TCTTGTCCCAGATGTGTCCCAGATAGATTTTCCCCGTTTTGAGAAAAAACGCTGTATCCATTACCCTGACTTGATTCTGGTTTGTCCCAGAT

>NZ_CP011382|3|3|1992659-1992750|CRISPRCasFinder
TCTTGTCCCAGATGTGTCCCAGAT	AGATTTTCCCCGTTTTGAGAAAAAACGCTGTATCCATTACCCTG
ACTTGATTCTGGTTTGTCCCAGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_168163442.1\|1996946_1997189_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151856.1\|1986238_1986565_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_144416011.1\|1997923_1998124_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_144416010.1\|1997387_1997705_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151900.1\|1998285_1998801_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_046814757.1\|1985201_1985921_-\|LamG-domain-containing-protein	unknown	unknown	gnl\|CDD\|379155
NZ_CP011382.1\|WP_035151854.1\|1985921_1986239_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151881.1\|1995167_1995443_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_168163441.1\|1996570_1996741_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151873.1\|1991683_1991992_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151861.1\|1986899_1987409_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_144416009.1\|1996725_1996917_-\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151883.1\|1995445_1995784_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151870.1\|1988270_1989092_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151863.1\|1987392_1987617_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151866.1\|1987609_1988152_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_168163440.1\|1995848_1996190_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151859.1\|1986561_1986903_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151878.1\|1994938_1995181_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035151871.1\|1989091_1991614_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|283306

>NZ_CP011382.1|WP_035151873.1|1991683_1991992_-|hypothetical-protein
MTAFNKDTDLPSNIDSLEKLAFWVGSALAQINLTTTAIEAPGYTQRVAQHGVFYVEADNKYRALIRMSIPMNVEHLIGANNPWTYAMPISETAIPASFKTAA
>NZ_CP011382.1|WP_035151871.1|1989091_1991614_-|hypothetical-protein
MDFEEPKKSKPKLDLNFDNPAPKTKPKLEFLRVEKGGELARPPISNKVIDESSQSFNNAVRELVEKQEALKNAFEQRKQIDDLYKRVTGSDAFIREVEILPPDGFDQLNKPPRNITPPNELEDIIRLRQEQLNRVKSPSVQHPPSTPSTVDLAPPSATPGARPGYKTQIDPLFDPSQKVPDFIPHTTPKNPVKVQVKEVKFDLPTPAKPKGFLAPPSSPKNFTPTGKPGKFGKLIPGLGVVTTSLEFGMRISNGQPLAEAAAATVITTTAGTIGATLGSLAGPVGTFAGSIIGSMIGNYVADVFFPPPSPTESPLTPIPGNTTYIDTEGQPNGAAYYADFLVSNIFGSEVVRYVFWSPFAGYRFVSEPWGQSFDLLSRGRTNRGATPDINWASFGGSGQANYYTEFSLLDHGPVEGSTPKPVSHSSPSSRRDFTPTGSSYPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNPNPGTTSDPEKAPKQFPPVLPRPNVSPGIPQSQPEPAPGSTCDPCGASIFKQGKDTLQQSKDNGDKLDQLNAILNGLDLVGLQEVLNRLGPKVHQNGLSGQTQAFFEDYTRRVGPQIIGKGGQPIGLTDYTKMFTKWLKVDRLLNVFTWVNTLHNAYMLSSSIGDTLFGVVDNIANIFFEDLEGVGFNSREIIGDFVDNIAKGIFGVETWSGMKTTWKKWNRIYQSAANIASSVRSMFDSARSVAEWTAENTGKIGNALKRFGVVGEKAYNWMPERVNAQSKWQQRLENLEEAASGIEMVTSEIVSIQDNLNELNEQRNEFNKNLEDALPKDRPDNKATKQRKDTEKAVSEGKDITDSDKEEDE
>NZ_CP011382.1|WP_035151870.1|1988270_1989092_-|hypothetical-protein
MPLPNGFSEFEHLQDSIRREHNKAVRAYFKNQADNDISTPKASLKHACLIKDDDSGIMMQQRQWLFEVVVGRLQSVQRPVYGIPVQEYQPDRRFKPQVKLYFLEPWDTVTHATNKVPQAEGEITFRLMNETQETISRAKAEQLARAIKQEIATPALIWEKGWFKATYQDLERGYDLRLFVKNKAEGERVVRKVLSIQNHTFDRDNFQFVEHDRTYSTNPGTHRVYGRQVNKPIRRRRVDVRFRYAQLLIWGQHHPVNLVAFGSTRLRSVIERV
>NZ_CP011382.1|WP_035151866.1|1987609_1988152_-|hypothetical-protein
MARRKSVRELEKQLEYARNRAAYKAPDREDGTATQRRPKLSLAYKPMSIAAGEGAKKYRVQASKESVQFFTQTALNLVDSTAEDPLPRGAQPAKAHAIVADASPEVIRAAGSKRPYVHYGKGTRGSKSQYSYTAPFSIQSVAAMDTEIRTLFNSVKSKLGGAYGRVWYSPEKFLITGSGE
>NZ_CP011382.1|WP_035151863.1|1987392_1987617_-|hypothetical-protein
MSNLFLPTPGLWYPGQSEKEWEEEVDLMILRANATDAFSRGEVDADWFLNFLHELGTDVFTAAEGWASTDELII
>NZ_CP011382.1|WP_035151861.1|1986899_1987409_-|hypothetical-protein
MSLSFNPSELGSWELVYSARLTNQNPDQPVGVRIPYIDPVEVPLIPTSRIFLIGTFSREARPSWYRAGYLTQEIIGVSISDEVVFEGLPGTPSTAIDGNSRIIGLNRIQLVIFPKYSSNFRLRFDAVAWLKSLTLSIWEYRGEETDTTEELIQAARAKLETIEAKIDNL
>NZ_CP011382.1|WP_035151859.1|1986561_1986903_-|hypothetical-protein
MNLTYAALADKLPPGAVEFVGNNQLKLNLSQLTGDTLTTESSLIEGIVKLMQSLATLTNSVNDARGDANPPLHPITFCSQDLVGTPDQPEFEFTVRVAVNTAQFVNNLIDPTE
>NZ_CP011382.1|WP_035151856.1|1986238_1986565_-|hypothetical-protein
MINNPGAILPESSDSGFIKCNNDEIAIPKNTPVTVLNGNGKRTYAAFINNSLSDITLVLEDKTKAAINKGIVLKPNGSFEITSINLYKGKVSVISAQNSKLSFVECSE
>NZ_CP011382.1|WP_035151854.1|1985921_1986239_-|hypothetical-protein
MPISNPSPTFSNTETVSTQAPQISNSLSTTASVLVASNSNRKGLTFFNSSDKTIYVDFSNSVTTSDYAFKLAPDAYYEMPQPIYTGAFHAILSTGTASIEVREFS
>NZ_CP011382.1|WP_046814757.1|1985201_1985921_-|LamG-domain-containing-protein
MPISNLQKSENINTPTIVNSGLQLEYRFTETTITDYSGNNRTGQSGNSSATDSQDVTPIDWLNVGVDFIDDNYIACPSGIYFPGAFTVETCLFLRDYAAWARIFDFGNGQANENVLLSSSNNGSGRLHLDIIANGQFSSPVVAPFSTKLLEWVYICVSFSSGTGKIYINNSLQARGNLLTPSNLTRNNNFLGRSNWNGEAYLNGCLSLFRIYNRELSNTERTDNFKQSRLWLADKGIIL
>NZ_CP011382.1|WP_035151878.1|1994938_1995181_-|hypothetical-protein
MKEIDAIAFVQASNDFGLSKDRFLSYLQKEYQLTEVQSLKLAAEILHVFPRNVEGNPKVKATIKAASIRIKLSESNGINN
>NZ_CP011382.1|WP_035151881.1|1995167_1995443_-|hypothetical-protein
MTQHKTEESGIPIGLFKASQACGSSLALFSDFLEKKLDINAIEATWVLAFFLHSMPQCVNDNPSLEQALRRTVIEVRQKLKDMEKGNNEGN
>NZ_CP011382.1|WP_035151883.1|1995445_1995784_-|hypothetical-protein
MDKDQYQKLTQQLNRCGLSWHHARTTIFIQKVCNRYLQLTPFTPESLPPKAAKHLEAILDNYEAVNEHLRRIQSNWDDPLIKSFFRQHAKNNQLTLAQWRELKNYLFEYIAF
>NZ_CP011382.1|WP_168163440.1|1995848_1996190_-|hypothetical-protein
MHPKKSEEWYVEKVIINLSQRTKTIPPNNYPVVPIKQHQPYVNKHHEPTSIPFPTPRQHNAKTRELFGKLVRLLHGDSAAANRLVDAQRLKTPAKGEEWILEKVIHDLGRDRY
>NZ_CP011382.1|WP_168163441.1|1996570_1996741_-|hypothetical-protein
MLRQLIKDYRGQVARKKNELQRLNEETRRITNDLEALEERIREFEVLEIELNTPEQ
>NZ_CP011382.1|WP_144416009.1|1996725_1996917_-|ribbon-helix-helix-protein,-CopG-family
MRKPLHGQRKKDLTLSITPEGFDLLDAKAKAMGISKSELVERIARDKVSSASEQQFLGECSAN
>NZ_CP011382.1|WP_168163442.1|1996946_1997189_-|hypothetical-protein
MCPTSPSKSFSGSMPTGCYLCVVWGFFLFALRYSYPACFGQPESDRWCFLGYLRLQTLLYPGTTKYSLLLPGLKVKIVPG
>NZ_CP011382.1|WP_144416010.1|1997387_1997705_+|hypothetical-protein
MEARTAKNHGGNRAKSNEGTMKPIGYYVDTKIPVVGEIEQSFGSCLQGLTKEQKIYLVFNLAGNLEDSFPYVHPANIEELCSKINKEISEESDAIGLMKALVNSL
>NZ_CP011382.1|WP_144416011.1|1997923_1998124_+|hypothetical-protein
MRFKAASAIQEAYASVEAGWLNAEISDYSLATEDVETAILMIENLENEQIESLLTAIQSLINTHET
>NZ_CP011382.1|WP_035151900.1|1998285_1998801_+|hypothetical-protein
MTIFARSPSVNTTLSQWFNRFGWASMFVNMITLTWFFWGKYQQAFWLIRLTGCIAVSALILGIEFAALSVLFEPAVLDEFIGQNKQQNSISNAITTAGMVAVSFIAGAAFWYDWVINTSAFQLKTNDLDYQILAAVIVLISEIFFWVANVCEISGKRKPLPKTTNKPEPKE

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Crispr_ID: NZ_CP011382_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_4

2342816-2343722

TypeI-D

Consensus_repeat	Method
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CRISPRCasFinder
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CRT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	PILER-CR

12 spacers

cas6,csc1gr5,csc2gr7,cas10d

The CRISPR arrays of NZ_CP011382_4

>merge|NZ_CP011382|4|2342816-2343722|CRISPRCasFinder,CRT,PILER-CR
CTAACAGAAGAAATAACGGGTTTCATTTATTAGAAAGCAGGAATAAGCGAAGATATCAACGGAACAATGTAGTTTCAATCCCGCGAACGGGTTTCATTAATTTGAAAGCTGGACAATAATATTATTCAGCAAAATCCATGGGCGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGCCAGGCTCCATGGTGTTATCTTGTGGTCTGTAGAAGATGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGTCGGTGAACTGGCAAGAATGGGCATCAACAGAATGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGTTAGAAGAATTAAGCCTTGGGTGGGAAGAGATGGGAAATAGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGGCAACATCTGGTCTGTTACTTGACCCAGCTGAACGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGCGTATCGCCTACGATAAAACCTATGTCGGACGTGAATTGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGTATTATCCGCAGTTGCGACGGATTTTTTAGCTGAGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGTTTTATAGTCATCTAACCTATAGACAGATAAATTGGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGATAACCCGTGATGATAGAATCTGCCGCAATGGGGGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGCTGCCCCGTATGATGGGGACACTGATAATGGTTTGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAGCATTGTCCGCAATCATGTAGAGATGTAATCCTAAGTGTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG

>NZ_CP011382|4|4|2342816-2343722|CRISPRCasFinder
CTAACAGAAGAAATAACGGGTTTCATTTATTAGAAAG	CAGGAATAAGCGAAGATATCAACGGAACAATGTA
GTTTCAATCCCGCGAACGGGTTTCATTAATTTGAAAG	CTGGACAATAATATTATTCAGCAAAATCCATGGGC
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CCAGGCTCCATGGTGTTATCTTGTGGTCTGTAGAAGAT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TCGGTGAACTGGCAAGAATGGGCATCAACAGAAT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TTAGAAGAATTAAGCCTTGGGTGGGAAGAGATGGGAAATA
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	GCAACATCTGGTCTGTTACTTGACCCAGCTGAAC
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CGTATCGCCTACGATAAAACCTATGTCGGACGTGAATT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TATTATCCGCAGTTGCGACGGATTTTTTAGCTGA
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TTTTATAGTCATCTAACCTATAGACAGATAAATTG
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	ATAACCCGTGATGATAGAATCTGCCGCAATGGGG
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CTGCCCCGTATGATGGGGACACTGATAATGGTTT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CATTGTCCGCAATCATGTAGAGATGTAATCCTAAGT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG

>NZ_CP011382|4|1|2342816-2343722|CRT
CTAACAGAAGAAATAACGGGTTTCATTTATTAGAAAG	CAGGAATAAGCGAAGATATCAACGGAACAATGTA
GTTTCAATCCCGCGAACGGGTTTCATTAATTTGAAAG	CTGGACAATAATATTATTCAGCAAAATCCATGGGC
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CCAGGCTCCATGGTGTTATCTTGTGGTCTGTAGAAGAT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TCGGTGAACTGGCAAGAATGGGCATCAACAGAAT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TTAGAAGAATTAAGCCTTGGGTGGGAAGAGATGGGAAATA
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	GCAACATCTGGTCTGTTACTTGACCCAGCTGAAC
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CGTATCGCCTACGATAAAACCTATGTCGGACGTGAATT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TATTATCCGCAGTTGCGACGGATTTTTTAGCTGA
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TTTTATAGTCATCTAACCTATAGACAGATAAATTG
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	ATAACCCGTGATGATAGAATCTGCCGCAATGGGG
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CTGCCCCGTATGATGGGGACACTGATAATGGTTT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CATTGTCCGCAATCATGTAGAGATGTAATCCTAAGT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG

>NZ_CP011382|4|1|2342887-2343722|PILER-CR
GTTTCAATCCCGCGAACGGGTTTCATTAATTTGAAAG	CTGGACAATAATATTATTCAGCAAAATCCATGGGC
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CCAGGCTCCATGGTGTTATCTTGTGGTCTGTAGAAGAT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TCGGTGAACTGGCAAGAATGGGCATCAACAGAAT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TTAGAAGAATTAAGCCTTGGGTGGGAAGAGATGGGAAATA
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	GCAACATCTGGTCTGTTACTTGACCCAGCTGAAC
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CGTATCGCCTACGATAAAACCTATGTCGGACGTGAATT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TATTATCCGCAGTTGCGACGGATTTTTTAGCTGA
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	TTTTATAGTCATCTAACCTATAGACAGATAAATTG
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	ATAACCCGTGATGATAGAATCTGCCGCAATGGGG
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CTGCCCCGTATGATGGGGACACTGATAATGGTTT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG	CATTGTCCGCAATCATGTAGAGATGTAATCCTAAGT
GTTTCAATCCCGCGAACGGGTTTCATTTATTAGAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_082127302.1\|2344416_2345355_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP011382.1\|WP_082127303.1\|2351262_2351583_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371659
NZ_CP011382.1\|WP_144416023.1\|2343974_2344112_-\|CRISPR-associated-endonuclease-Cas2	unknown	unknown	unknown
NZ_CP011382.1\|WP_035152549.1\|2347277_2350211_-\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	cas10d	cd09712_cas10d_CAS-I-D	gnl\|CDD\|187843
NZ_CP011382.1\|WP_035152521.1\|2337768_2338050_+\|monovalent-cation/H(+)-antiporter-subunit-G	unknown	unknown	gnl\|CDD\|377023
NZ_CP011382.1\|WP_035152537.1\|2341497_2341989_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|225778
NZ_CP011382.1\|WP_035152545.1\|2345323_2346133_-\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	csc1gr5	cd09711_csc1gr5_CAS-I-D	gnl\|CDD\|274458
NZ_CP011382.1\|WP_168163534.1\|2340332_2340890_-\|DUF1349-domain-containing-protein	unknown	unknown	gnl\|CDD\|226037
NZ_CP011382.1\|WP_035152535.1\|2341004_2341478_-\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|225778
NZ_CP011382.1\|WP_035152530.1\|2339700_2340333_-\|uridine-kinase	unknown	unknown	gnl\|CDD\|180660
NZ_CP011382.1\|WP_035152518.1\|2337514_2337772_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035152553.1\|2352011_2352212_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035152543.1\|2343767_2343980_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035152540.1\|2342100_2342607_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP011382.1\|WP_035152524.1\|2338039_2338624_+\|DUF4040-domain-containing-protein	unknown	unknown	gnl\|CDD\|236006
NZ_CP011382.1\|WP_035152546.1\|2346223_2347219_-\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	csc2gr7	cd09709_csc2gr7_CAS-I-D	gnl\|CDD\|375747
NZ_CP011382.1\|WP_035152526.1\|2338620_2339280_+\|Na(+)/H(+)-antiporter-subunit-B	unknown	unknown	gnl\|CDD\|237140
NZ_CP011382.1\|WP_035152516.1\|2337131_2337518_+\|cation:proton-antiporter	unknown	unknown	unknown
NZ_CP011382.1\|WP_052754438.1\|2352383_2356529_+\|NACHT-domain-containing-protein	unknown	unknown	gnl\|CDD\|227922
NZ_CP011382.1\|WP_035152551.1\|2351575_2351911_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_082127302.1\|2344416_2345355_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	6.28743e-16
NZ_CP011382.1\|WP_082127303.1\|2351262_2351583_-\|hypothetical-protein	gnl\|CDD\|371659	pfam11663, Toxin_YhaV, Toxin with endonuclease activity, of toxin-antitoxin system. YhaV causes reversible bacteriostasis and is part of a toxin-antitoxin system in Escherichia coli along with PrlF. The toxicity of YhaV is counteracted by PrlF by the formation of a tight complex which binds to the promoter of the prlF-yhaV operon. In vitro, YhaV also has endonuclease activity.	2.34489e-33
NZ_CP011382.1\|WP_035152549.1\|2347277_2350211_-\|type-I-D-CRISPR-associated-protein-Cas10d/Csc3	gnl\|CDD\|187843	cd09712, Cas10d_I-D, CRISPR/Cas system-associated protein Cas10d. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Large proteins, some contain Zn-finger domain. Fused to N-terminal HD domain; signature gene for I-D subtype; also known as Csc3 family.	0
NZ_CP011382.1\|WP_035152521.1\|2337768_2338050_+\|monovalent-cation/H(+)-antiporter-subunit-G	gnl\|CDD\|377023	pfam03334, PhaG_MnhG_YufB, Na+/H+ antiporter subunit. This family includes PhaG from Rhizobium meliloti, MnhG from Staphylococcus aureus, YufB from Bacillus subtilis.	2.37297e-11
NZ_CP011382.1\|WP_035152537.1\|2341497_2341989_-\|DMT-family-transporter	gnl\|CDD\|225778	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown].	1.32536e-41
NZ_CP011382.1\|WP_035152545.1\|2345323_2346133_-\|type-I-D-CRISPR-associated-protein-Cas5/Csc1	gnl\|CDD\|274458	TIGR03159, cas_Csc1, CRISPR type I-D/CYANO-associated protein Csc1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family is a CRISPR-associated (Cas) family strictly associated with the Cyano subtype of CRISPR/Cas locus, found in several species of Cyanobacteria and several archaeal species. This family is designated Csc1 for CRISPR/Cas Subtype Cyano protein 1, as it is often the first gene upstream of the core cas genes, cas3-cas4-cas1-cas2.	2.7279e-63
NZ_CP011382.1\|WP_168163534.1\|2340332_2340890_-\|DUF1349-domain-containing-protein	gnl\|CDD\|226037	COG3506, COG3506, Uncharacterized conserved protein [Function unknown].	5.23978e-106
NZ_CP011382.1\|WP_035152535.1\|2341004_2341478_-\|DMT-family-transporter	gnl\|CDD\|225778	COG3238, COG3238, Uncharacterized protein conserved in bacteria [Function unknown].	2.57041e-37
NZ_CP011382.1\|WP_035152530.1\|2339700_2340333_-\|uridine-kinase	gnl\|CDD\|180660	PRK06696, PRK06696, uridine kinase; Validated.	2.60373e-25
NZ_CP011382.1\|WP_035152546.1\|2346223_2347219_-\|type-I-D-CRISPR-associated-protein-Cas7/Csc2	gnl\|CDD\|375747	pfam18320, Csc2, Csc2 Crispr. The Csc2 Crispr family of proteins forms a core RNA recognition motif-like domain, flanked by three peripheral insertion domains: a lid domain, a Zinc-binding domain and a helical domain. The CRISPR-Cas system is possibly a mechanism of defence against invading pathogens and plasmids that functions analogously to the RNA interference (RNAi) systems in eukaryotes.	0
NZ_CP011382.1\|WP_035152540.1\|2342100_2342607_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.25506e-21
NZ_CP011382.1\|WP_035152524.1\|2338039_2338624_+\|DUF4040-domain-containing-protein	gnl\|CDD\|236006	PRK07377, PRK07377, hypothetical protein; Provisional.	5.39636e-81
NZ_CP011382.1\|WP_035152526.1\|2338620_2339280_+\|Na(+)/H(+)-antiporter-subunit-B	gnl\|CDD\|237140	PRK12567, PRK12567, putative monovalent cation/H+ antiporter subunit B; Reviewed.	4.97104e-104
NZ_CP011382.1\|WP_052754438.1\|2352383_2356529_+\|NACHT-domain-containing-protein	gnl\|CDD\|227922	COG5635, COG5635, Predicted NTPase (NACHT family) [Signal transduction mechanisms].	7.09557e-48

>NZ_CP011382.1|WP_035152540.1|2342100_2342607_+|MarR-family-transcriptional-regulator
MNKDRIDIILEEWQQELPQLDTSAVSITGRVLRIARLLEKHRESVLVEYGLNVWSFDVLATLRRQGQPFRLKPTELYSLLMLSSGAMTNRIDRLEQDGIVMRVRDAEDRRSVMVQLTPKGIQLADTVMPILFEKEKQMLSQFTADEVQLSIPMLRKLLMLLEQDAKSV
>NZ_CP011382.1|WP_035152537.1|2341497_2341989_-|DMT-family-transporter
MTPIRLVLRGSVPNGQSYLYVLLALLNGAILPIQSNLNAQLARSLNSVPLAADISYLVGSIALISLLYTGWFGHPDWSALAKAPRWSLMGGLFGVWYITSSAYFTSILGTTLTQGLIICGQAIAGLVTDHFGWLGVNRRRLTANRRLVMGLLVVAIFLLSLPT
>NZ_CP011382.1|WP_035152535.1|2341004_2341478_-|DMT-family-transporter
MEIFLALLGAGSAGGFSTISAAVNAQLKTILRSPIAAATINFVVGFSILTLLLALGIFPLYKLDLLFITPWWAFLGGLLGAIFVTLSSLIVPKLGLTTTTLVVVFSQMFMSLVIDQLGWFGAIKYPITTPKILGIATLVVAIAINQLDKNYSAQNYK
>NZ_CP011382.1|WP_168163534.1|2340332_2340890_-|DUF1349-domain-containing-protein
MKNMEWLNEPPNWSHSHQRIIVTTAPKTDFWRRTHYGFIRDSGHFYFDRISTDFVVDVKIKGNYKDLYDQAGIMIRADEKHWIKTGIEYVDGVQNISAVVTHNYSDWSFTPLLNPPNIFQLRVERCQEAIHIAYLDEYDRYVPFRMAYFPVEQDIQVGIMCASPQGNGYEIIFDDYKLTKKSDKS
>NZ_CP011382.1|WP_035152530.1|2339700_2340333_-|uridine-kinase
MNIEYLADSILRKQSELSVDRGFLVAISGIDGSGKGYITEKLITALNEQNINAISINLDAWHKLPNERFNSEHPAEHFYHHAFHFDALFQQLLLPLKSQRMINLTTVLTGISGIPQTYHYQFQNVDVIVIEGIFLLKRSLLHFYDFKIWIDCSFETALERAIQRNQEGISLEQIIEDYQKIYFPAQKAHLAIDNPKSSTDMIYINDAKLF
>NZ_CP011382.1|WP_035152526.1|2338620_2339280_+|Na(+)/H(+)-antiporter-subunit-B
MKWVYILAGIALFVKMLVMPHPDANFDVDIVAAIVKDSGVPNAVSGVIFRNRLYDTIFEVIVFTIAIMGANYLLANERPSCTIYQFTDQGSIVLARLGATIAALVGIELAIRGHLSPGGGFAAGVAGGTAIGLVAITSSPEWMQSIYQRWRAATWEKVSVLVFIVLAVITLAGYELPHGELGTLFSGGALPLLNFLVAVKVALGSWAVILIFIRYRGLL
>NZ_CP011382.1|WP_035152524.1|2338039_2338624_+|DUF4040-domain-containing-protein
MNHDSYLYVIIALLPLAAGLLVTQPNPYHALILRGVLGAIAAMVDALLGAADVALTEALMGTMLAIALYAVAVRSSLVMRLGIITEEDGEKSSLQPSGEQDFAQLLENLRSICRKRYMRLELVSYTNPQALQRALIEKEVHAICTQPSQPQEEQVKYHTQTRIPRLYDIMQTELSTPGATLSYVNIADLGEEKL
>NZ_CP011382.1|WP_035152521.1|2337768_2338050_+|monovalent-cation/H(+)-antiporter-subunit-G
MINLLSYTCIGIGIIFWFWGTWHLVSDRSVLYKLHGLSVADTLGSMIIIVGLMLQIPGKLPLLLLGIISLAIWNTMLGYVLAYCSTQETNRES
>NZ_CP011382.1|WP_035152518.1|2337514_2337772_+|hypothetical-protein
MNLEIVMIAMIVALLIPIYEAWKSDDVWQLMLAFGSISSKVAIIILLVSVLRDDWMIGVVAVIILSVGNAGLMLLAHILRRLNEV
>NZ_CP011382.1|WP_035152516.1|2337131_2337518_+|cation:proton-antiporter
MIGHLILRLVIWFLLTSDLSLVNIIIGVAIALLLPRGYTSPEKLKDWLDVIVKTLVAIPVAYMEAFEIIFRPHKQEDIILERVKSRRSPRLIFIDIFLITFTPKTIVLKYREEGWYEVHQIHRGKKQS
>NZ_CP011382.1|WP_035152543.1|2343767_2343980_+|hypothetical-protein
MPGENQNSISAIDKERSLKTENAKTIQLSRFWAFAGGLGFLTVLSHGRKTADLIITPPQLQRNQRKIKPS
>NZ_CP011382.1|WP_144416023.1|2343974_2344112_-|CRISPR-associated-endonuclease-Cas2
MHRRRKNHLPPSVDSVRIYVLDAGSVRKTITYGSEKPRQEDTIIL
>NZ_CP011382.1|WP_082127302.1|2344416_2345355_-|CRISPR-associated-endoribonuclease-Cas6
MEPETSQLQHELSDNITNSYTNKSTTLHSIVVELAAAENGEIPPTLSRALHALVLHWIAIANPAIAESIHNAQNSPITISNLLGNRRREGTRIGDYFYFRISLLDGSLIEPLMRGFEQSETQAIALADFRFVLRNLYALPGTHQLAGAADYSLLSNPPQVLHDIELNFLSPTSFKQNQNIQTFPLPELVFNSLQRRWNIFAPTQYHLPNCEWNGTVSAYELKTYALKMEGGAEVGAQGWVRYRFNDNETARFATILANFAFFAGVGRKTAMGMGQTQLCLGMREMREMRGTKGRGEERGTKGRGEKRGTRGK
>NZ_CP011382.1|WP_035152545.1|2345323_2346133_-|type-I-D-CRISPR-associated-protein-Cas5/Csc1
MALYHCILTLHDNVFFATREMGILYETEKYLHNWGLSFALFSVDYIPQPYRLQGELAQKPTYLDNKAERNLLHLNQAEIYVFPAHPIHWSYQINTFKSAQVAYYGKSKQFGDKGAEKNYPINYGRAKELAVGSQYRTYIIAPDDIKIPHWIRLGKWAAKIKVETIKIPDNLLKNKSGNYICSHPLNPLDLASNTRILLYNRIVMPPASLISQAQLNGEYLFTNKKDDKQKQDWETFQSQLNPGEYEQIPEQIHLPQGAFYGAGNLAATA
>NZ_CP011382.1|WP_035152546.1|2346223_2347219_-|type-I-D-CRISPR-associated-protein-Cas7/Csc2
MTILSTLKPEFQTSFPRLASGKYIHFIMLRHSQSFPVFQTDGILNTARTQAGLGNTDASKKQISRLVMFKRKQTTPERLAGRELLRGLNLTSADASVKDKYCEYNGENSCKKCPDCIIYGFAIGDSGSERSKVYSDSAFSLSAYEESHRSFTFNAPFEGGTMSEAGEMRSSINELDHVIPEVTFPTVETLRDSTYEGFLYVLGNLLRTKRYGAQESRTGTMRNYLGGIVLCDGEIFSNLHFTQALYDALKGDVDTPVADILQQVETVSNNLLSAEPVRKNKLIFGAELEDLIGEVNQLFQDETRLQETMATLYGQTKAYAESFGALKKKGK
>NZ_CP011382.1|WP_035152549.1|2347277_2350211_-|type-I-D-CRISPR-associated-protein-Cas10d/Csc3
MSTLLQTLLIETLPEDTDPILCLYIEKLLPALEREFGLISALGGSYEAHLQMLSQLGDKYAQEKAQRFSNFADQSLLVHVLNGLLTAWNISKYLAEPLADVEKYLLCLGLTLHDYNKYCNGQGEETPKNWEVEEIINVCRELGEKLEFELFWQEWRDYLPEIAYLAQNTQGKTSTNLYPANWSKMKTGDRRRLENPLRRLLAFGDIAVHFCDPADTDTQTGGDRLREQLRFLSINKQLVYHRLRDTVGILSNGIHNATIQFAKALDWEPILFFAQGAIYLAPTDTNTPDISDLQAYIWEQVSGALASRMMGGDIGFKRDGKGLKVAPQTLELFSPAELIPKLPRVIDVKVTNIKNPATPKRLEKLDLSESEREFLNQGADIRADRIAEFIFLTQKEFFSNSTEYINWMLSTLKIQDKISPEQTQLQAGGVNYGWYHAAAYYVASNATLQPEDISEKMETWAENLTIWARKNNLLPQHSSPIRDIFYDYLSQYLEVKGWNSHNTSFEAEFAAYTNAKTKLAKQPICSLSSPGFPSEDQMDSVVLFKPQQYSNKNALGGRQIKRGISKIYALEMLLRQAFWSVPAGKLEEQQPVFLYIFPAYVYSPQTANAIKLLVNNMKQVNLWDVRKQWLGNGMKLNALQTVNWLNEEVELGRFQKDKYEKDNLHFMAMNYTTTRGKTLTDAWVKPAFLALSLPILLGVKVIATSSSVPLYNSDSDFKESVILDAPASFWNLLGISNSLRIQDFERAMQRLLIAYSLHLDTRSSPPDSKWRDLIKTVREVTTNVLNIFSMATAKLREDKREPSNEEIYRYWEYANKWIEQDKSHGDRGAYIMELIEKIVRQYRVFYQANLSESSHTILLPISKALEIILSVPQQIDGDNLILQASGQIKDAIQRQEVYKRPLIMDKTVDFAIREEKELMAIHEFVTTCVRELFMRLYKGDRALLQENRNRIKSGAEFAYRWLALQEKSAKSSAQKDT
>NZ_CP011382.1|WP_082127303.1|2351262_2351583_-|hypothetical-protein
MANFVSNGWEIYFHPQLFGSQYQELFDRVSKLKEKLPNSEFKTHARVKLFAAITVAVETKITSDPFASYFALTGALKRYGRVKKMGLLERYRLFFRAFDTPELKLF
>NZ_CP011382.1|WP_035152551.1|2351575_2351911_-|hypothetical-protein
MSNSYKIRSTKIGNSAGFRLPAEFYREYPQFANASGWIEVLSPDTAIVKIIPESIDEEEEDDSLMMRLFLDFATTEALKNNSLQPYTIEMSEAANKLIEGVELEDELLEDG
>NZ_CP011382.1|WP_035152553.1|2352011_2352212_-|hypothetical-protein
MSARKPNSSLSQKAIALLLIVKLMLVGIQADNRIQQGDAPIEVLIWLINQCVPVLQQAGKLEDKQK
>NZ_CP011382.1|WP_052754438.1|2352383_2356529_+|NACHT-domain-containing-protein
MVRNSRRDDSVLENAIALVAALLELGEQELGDVKAPLVVRWENHRLRVTGYTTKQISGKRSRTSEVGTTKQDLLTQIKAAGKSLKCPKNMQLKELDEIQIVLDSLRKLGLFEDERLRKNAPWKFSLTLKHQTATIEANLEVIKRKWREHPKNSSSQNSPIPEISNTSINWHNICGEMLRKYKRLTTNQLLLDDDTKFEFDEIHVPLALVERTKTEKRQENISPEFGSQLLQPSEYQEKQKFKHDDFLEQILQQGNGKTQGKRIALIGEPGAGKTTLLQAIAFWILDKNLGLPIWISLADLQLPDGSLKDFREHLQESWLGRAIANVTPAIKTEFTNQITSGQVWLLLDGVDEIAMSNSSPLEAISSQLVGWIAKSRVVLTCRVNVWEGNLNALEDFETYRLLDFNYPSDVKQFIENWFKPRNSHTTNHQAEELWQELSKPGHQRIQDLVKNPLRLTLLCATWQSSAKGLPETKAGLYSLFVNYFYKWKSNRFKTKEKQQRELNTALGELAKIAIDGEVARFRLKYGLVSSVLGDADEEDSLFCLALKLGWLNKVGIAAESDIQEEVYAFYHPTFQEYFAGKWLAEYVEKQKEGQQSDEELQWNYLNHLKWTEPAALMMGLLSNEGLALRVVRLALQVDWQLGARLAGEVKVEWQEKTVALVKSLNIPPLLKIRLLESAKSNASIPELMKFLEYEDSDVRYRAVHALREIKSETAIPGLIKLLQHENRDVRYTAAILLEDITSEDAIPELIKIIKLTDYENSNLRSIAQSALGKIESQSAIMELIKLLEYEDNNIRWNAEYALGKIKSKASIPQLIKLLEHDSLSVRSNVIKALGEIKYEAAIPKLIQLLQEDSYVRKEVIEALKKMESESSTAELIKLIKYENSFVQDDSSFVRRNAISALGEIKSEAAIPQLLKLLEDGNSSVRWLAVYALREIKSEAAIPELIQCLKDDDIDVRIYAEKTLIEIKSETVISALVKYIENENYQTDNHANKSQKTINYETNISKLVKLLNHKNYRKIALFALGQLKSEEAIPGLIALIKYGKHITYEDRIISEKAVDTLIHINSEQAIPGLIEIIECVNPGIRGNYHAFSGALRALTEINSEVAFSKLIQLLEYQNYRVRDIVKSALEKIEYPVPIVKLITLLHNANDFVSAIAVKLLIKSKSDAKIPELIKLLDNEDYSVRKKAIFALANIKSEAAIPGLMKILEDEDFDKRSRAAIALTKIKCESAIPGLIKSLEDKNIYLISGIRPELVNALGEIKSEKAIPHLIKLCSGSYEELSISVASALGKIKSEAAIPGLIQLLEDENTSVSDSAASALGEIKSEVTMINLINILNNQNLLQKNNGYNALYALESLEEIQQHLGYINHSQTKHRKLILFYLH

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Crispr_ID: NZ_CP011382_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_5

2774640-2774837

Orphan

Consensus_repeat	Method
GTGGCTTTTGGCGTGGCT	CRT

4 spacers

PD-DExK

The CRISPR arrays of NZ_CP011382_5

>merge|NZ_CP011382|5|2774640-2774837|CRT
GTGGCTTTTGGCGTGGCTTTTGGCGTGGCGGTCGGCGTGGCTTATGGCGTGGCTTTTGGCGTGGCTTATGGCGTGGCTTTTGGCGTGGCTTTTGGCGTGGCTTATGGCGTGGCTTATGGCGTGGCTTATGGCGTGGCTTATGGCGTGGCTTTTGGCGTGGCTTTTGGCGTGGCGGGAGGCGTGGCTTTTGGCGTGGCT

>NZ_CP011382|5|2|2774640-2774837|CRT
GTGGCTTTTGGCGTGGCT	TTTGGCGTGGCGGTCGGCGTGGCTTATGGC
GTGGCTTTTGGCGTGGCT	TATGGCGTGGCTTTTGGC
GTGGCTTTTGGCGTGGCT	TATGGCGTGGCTTATGGCGTGGCTTATGGCGTGGCTTATGGC
GTGGCTTTTGGCGTGGCT	TTTGGCGTGGCGGGAGGC
GTGGCTTTTGGCGTGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035153269.1\|2782855_2783224_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275056
NZ_CP011382.1\|WP_035153243.1\|2768848_2769484_+\|hypothetical-protein	PD-DExK	mkCas0061_PD-DExK_CAS-I:CAS-III	gnl\|CDD\|381326
NZ_CP011382.1\|WP_035153259.1\|2770493_2770796_-\|urease-subunit-gamma	unknown	unknown	gnl\|CDD\|183913
NZ_CP011382.1\|WP_035153275.1\|2784668_2786039_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|129571
NZ_CP011382.1\|WP_035153262.1\|2771664_2772702_-\|methyltransferase	unknown	unknown	gnl\|CDD\|366359
NZ_CP011382.1\|WP_035153239.1\|2766039_2766762_-\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|226983
NZ_CP011382.1\|WP_035158925.1\|2783268_2783547_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035153235.1\|2764804_2765905_-\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|223715
NZ_CP011382.1\|WP_035153261.1\|2770808_2771645_-\|urease-accessory-protein-UreD	unknown	unknown	gnl\|CDD\|223899
NZ_CP011382.1\|WP_035153264.1\|2777018_2778656_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP011382.1\|WP_035153241.1\|2766795_2768502_-\|urease-subunit-alpha	unknown	unknown	gnl\|CDD\|237305
NZ_CP011382.1\|WP_035153272.1\|2783600_2784050_-\|anti-sigma-regulatory-factor	unknown	unknown	gnl\|CDD\|225083
NZ_CP011382.1\|WP_035153247.1\|2770097_2770463_-\|urease-subunit-beta	unknown	unknown	gnl\|CDD\|237303
NZ_CP011382.1\|WP_046814800.1\|2769524_2770091_+\|Uma2-family-endonuclease	unknown	unknown	gnl\|CDD\|99749
NZ_CP011382.1\|WP_168163466.1\|2779948_2780092_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035153263.1\|2773242_2773497_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035158922.1\|2781380_2782772_-\|asparagine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235176
NZ_CP011382.1\|WP_035153266.1\|2778809_2779121_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP011382.1\|WP_035153267.1\|2780412_2781090_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP011382.1\|WP_168163465.1\|2779597_2779756_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035153243.1\|2768848_2769484_+\|hypothetical-protein	gnl\|CDD\|381326	cd19100, AKR_unchar, uncharacterized aldo-keto reductase (AKR) superfamily protein. This family includes a group of uncharacterized AKR superfamily proteins. Aldo-keto reductases (AKRs) are a superfamily of soluble NAD(P)(H) oxidoreductases whose chief purpose is to reduce aldehydes and ketones to primary and secondary alcohols. AKRs are present in all phyla and are of importance in both health and industrial applications.	0.00716385
NZ_CP011382.1\|WP_035153259.1\|2770493_2770796_-\|urease-subunit-gamma	gnl\|CDD\|183913	PRK13241, ureA, urease subunit gamma; Provisional.	7.94943e-72
NZ_CP011382.1\|WP_035153275.1\|2784668_2786039_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|129571	TIGR00479, 23S_rRNA_uracil1939-C5-methyltransferase_RlmD, 23S rRNA (uracil-5-)-methyltransferase RumA. This protein family was first proposed to be RNA methyltransferases by homology to the TrmA family. The member from E. coli has now been shown to act as the 23S RNA methyltransferase for the conserved U1939. The gene is now designated rumA and was previously designated ygcA. [Protein synthesis, tRNA and rRNA base modification].	7.72296e-169
NZ_CP011382.1\|WP_035153262.1\|2771664_2772702_-\|methyltransferase	gnl\|CDD\|366359	pfam00891, Methyltransf_2, O-methyltransferase. This family includes a range of O-methyltransferases. These enzymes utilize S-adenosyl methionine.	2.88935e-46
NZ_CP011382.1\|WP_035153239.1\|2766039_2766762_-\|Uma2-family-endonuclease	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	9.85083e-05
NZ_CP011382.1\|WP_035153235.1\|2764804_2765905_-\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.26623e-50
NZ_CP011382.1\|WP_035153261.1\|2770808_2771645_-\|urease-accessory-protein-UreD	gnl\|CDD\|223899	COG0829, UreH, Urease accessory protein UreH [Posttranslational modification, protein turnover, chaperones].	1.18265e-95
NZ_CP011382.1\|WP_035153264.1\|2777018_2778656_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP011382.1\|WP_035153241.1\|2766795_2768502_-\|urease-subunit-alpha	gnl\|CDD\|237305	PRK13207, ureC, urease subunit alpha; Reviewed.	0
NZ_CP011382.1\|WP_035153247.1\|2770097_2770463_-\|urease-subunit-beta	gnl\|CDD\|237303	PRK13203, ureB, urease subunit beta; Reviewed.	8.07149e-73
NZ_CP011382.1\|WP_046814800.1\|2769524_2770091_+\|Uma2-family-endonuclease	gnl\|CDD\|99749	cd06260, DUF820, Domain of unknown function (DUF820). This family consists of hypothetical proteins that are greatly expanded in cyanobacteria. The proteins are found sporadically in other bacteria. They have been predicted to belong to the PD-(D/E)xK superfamily of nucleases.	1.77469e-44
NZ_CP011382.1\|WP_035153269.1\|2782855_2783224_-\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.00118221
NZ_CP011382.1\|WP_035158922.1\|2781380_2782772_-\|asparagine--tRNA-ligase	gnl\|CDD\|235176	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated.	0
NZ_CP011382.1\|WP_035153266.1\|2778809_2779121_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	1.13992e-47
NZ_CP011382.1\|WP_035153267.1\|2780412_2781090_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.14758e-55
NZ_CP011382.1\|WP_035153272.1\|2783600_2784050_-\|anti-sigma-regulatory-factor	gnl\|CDD\|225083	COG2172, RsbW, Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms].	5.55753e-30

>NZ_CP011382.1|WP_035153263.1|2773242_2773497_-|hypothetical-protein
MRKQNISPAFLLVFSTVVSLTLVSGSTSLWLSSQPQLSEYQVRTLENFTATWQTGIGAIFGLLGGKAAELLDSEGEDEDDDESL
>NZ_CP011382.1|WP_035153262.1|2771664_2772702_-|methyltransferase
MTQSIQAPVVGDIPLQVVLMQMVTSNWVSQSVYAAAKLGIADLLKDGNKNYYELAEATKTHPRSLYRLLRALASVGVFAETETGYFTLTPLANYLRSDISESLRAMAIMNGEEQYHAWGNLLYSLQTGENTFKHLYGSELFDWFNQNPPQAKIFDDAMTSYSVVQNPGVVAGYDFSGIKTLVDVAGGHGKLLTDILKDNPRMQGILFDQESVIEGAKSFIAGSEVGDRCTLVSGDFFESVPSGGDAYILKMIIHDWSDELAIKILKNCRTVMPKDGKLLIVEQVVPPGNQASFSKFLDLHMLLMCEGGCERTEEEFQVLLEKAGFQMTRIVPLESVMSVVEAIPI
>NZ_CP011382.1|WP_035153261.1|2770808_2771645_-|urease-accessory-protein-UreD
MDKSLNSWHGKLHLTYGSHGGKTQLVSSQNQAPLKVQRPFYPEGEAVCHSIILHTAGGVVGGDRLSTNIHLQPQSQVLLTTAAASKIYKSNGLQARQDVTIHIDSHACLEYLPQETIVFNSANYRQDVRIHLAVDASFLGWEITRFGRTARNEQFIQGEWRNYTEIWRDNQPLWIDRQYLPGDMAVFHSPHGLNSQAIAGSFIYLGKQISPQLITQIRQMWGENSPSAVGVTALEHGFLCRYRGNSTSEVRNWFISVWQLLRQSIGNRGNCVPRVWQI
>NZ_CP011382.1|WP_035153259.1|2770493_2770796_-|urease-subunit-gamma
MQLTPQEKDKLLIFTAALVAERRKQRGLKLNYPEAVAYISAAILEGARDGRTVAELMSYGTTLLTHDEVMVGVPEMIHEVQVEATFPDGTKLVTVHNPIR
>NZ_CP011382.1|WP_035153247.1|2770097_2770463_-|urease-subunit-beta
MIPGEYIVADGEIELNAGRETVKLLVANSGDRPIQVGSHFHFFEVNSALQFPRESARGMRLDIPAGTAVRFEPGDEKEITLVPLVGSRQVYGFNGLINDSLEADKNFGKKGKDKQKEKKKK
>NZ_CP011382.1|WP_046814800.1|2769524_2770091_+|Uma2-family-endonuclease
MVANPQFPHMTRQEYLEWEANQELRYEYIDGEVWAMTGGTKPHNRIALNFATSLDTFLAGKGCDVYINDVKVQISALNSYHYPDVVVTCDARDRESNDLVQYPCLIIEVLSPSTETFDRGKKFARYRQIPTLKEYILIASEEICVDCFRRGEQGLWIYSSYTPEDKLTLETLGFSIYVKDLYRQVNFK
>NZ_CP011382.1|WP_035153243.1|2768848_2769484_+|hypothetical-protein
MSFDSYKNIAEVLQEYRITSCTEKFIIETHIPIRESFREDLDFSLKALTWEESESAICEAIIFPSLKEIYRSHCEYFTLWSHKQLNFDEKLSGTPDYIIAQKSPLGKEIFSQPFLVAVEAKKDDFIKGWGQCLAEIVAIQKINQIPTQNIFGIVTNGQFWQFGKLRENIFTKEVTSYTLSDLEQLFAAIHYIFLQCRRELELIHQKSPEFG
>NZ_CP011382.1|WP_035153241.1|2766795_2768502_-|urease-subunit-alpha
MPYRMSRRAYAETYGPTVGDKIRLADTELFIEVERDFTTYGDEVKFGGGKVIRDGMGQSPISQADGAVDLVITNALILDWWGVVKADIGIKDGKIFQIGKAGNPYIQDNIDIIIGPGTEAIAGEGMILTAGGIDTHIHFICPQQIEVAIASGITTMIGGGTGPATGTNATTCTPGPWNIYRMLQAADAFPVNLGFLGKGNTSQPQGLIEQVLAGAIGLKLHEDWGTTPATIDTCLTVADEYDVQVAIHTDTLNEAGFVEDTIAAFKNRVIHTYHTEGAGGGHAPDIIKVCGEGNVLPSSTNPTRPYTVNTLDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVIIRTWQTGHKMKVQRGSLPGDSTADNLRAKRYVAKYTINPAIAHGIADYVGSVEVGKLADLCLWQPAFFGVKPEMVIKGGMIAWAQMGDANASIPTPQPVHMRPMFASFAGARHATSLTFLSHAALRREIPEQLGLRKQAVQVSGIRQLTKRDMKLNDAMPHIEVDAETYEVRADGELLTCEPATILPMAQRYFLF
>NZ_CP011382.1|WP_035153239.1|2766039_2766762_-|Uma2-family-endonuclease
MLAHSYQVTWEKLPDDFVLDDQPVDNINQPLLAAALTESLELAGKLPTTSLATTNYGICATLNNQLVIKAPDWGYVPSIRVPRDEVIRSYTPQLQGDIPAIVMEFISDTEGTEYSSKPTYPPGKWFFYEKILKVPNYAIFSPDTGVLEVYQLDDLDNYQLLPADDNQRYWIAPMQLFLGVWAGMRENRSGYWLRWWDEQGNLLLWGGELANQERQRAEVERQRAERLLQQLRDAGIEPNL
>NZ_CP011382.1|WP_035153235.1|2764804_2765905_-|hybrid-sensor-histidine-kinase/response-regulator
MISPSPHPDKILVVDDSPDNVFLIKTILEEEGYVVATAENGHRALAQVAASNFDLVLLDLMMPGMDGYEVTKNIRGNTSLPFTPILLITAHDSPNVAQGLDLGADDFIRKPVTVDELLARVRSLLRLKHSIDERDEIARQRQDFVSRLTHDLRTPLVAAERMLDLLQQGALGELSPQMQEIITIMGRSNSNLLAMVNTLLEVYRFEAGRKNLAFFPVDLSQLLTEVAGELATLGEQKGLKIITDFSESATDMKIMGDRLELHRLFTNLVGNAIKFTDSGFIQICLIPGSTDNFLTVKVIDTGCGISEQEQNSLFERFRSGSHKGSGSGLGLYLSRRIVEAHQGMIQVSSELGKGSIFTVTLPKKQA
>NZ_CP011382.1|WP_035153264.1|2777018_2778656_-|chaperonin-GroEL
MAKRIIYNENARRALERGMDILAEAVAVTLGPKGRNVVLEKKFGAPQIVNDGVTIAKEIELEDHVENTGVALIRQAASKTNDAAGDGTTTATVLAHAVVKEGLRNVAAGANAILLKRGIDKATGFLVEKIASHARQVEDSKAIAQVGAISAGNDDEVGAMIAQAMEKVGKEGVISLEEGKSMTTELEITEGMRFDKGYISPYFATDTERMEAIFDEPYILLTDKKIALVQDLVPILEQVARSGRPLIILAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDIAVLTGGQLITEDAGLKLDNTKLDMLGKARRITITKDNTTIVAEGNDQAVKARCEQIRRQMDETESSYDKEKLQERLAKLSGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHLAPELETWANANLSGEELIGALIVARALPAPLKRIAENAGQNGAVIAERVKEKEFNVGYNAANNEFVDMFAAGIVDPAKVTRSALQNAASIAGMVLTTECIVVDKPEPKDNAPAGAGAGMGGDFDY
>NZ_CP011382.1|WP_035153266.1|2778809_2779121_-|co-chaperone-GroES
MAAVSLSVSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVAVGDGKVKDDGSRQSLDVKVGDKVLYSKYAGTDVKLGTDEYVLLSEKDILAIVN
>NZ_CP011382.1|WP_168163465.1|2779597_2779756_+|hypothetical-protein
MGDNTEIQANLQISLEHSGSRQASSQCVENLGFAQIRRHIFLGTDQIILKCA
>NZ_CP011382.1|WP_168163466.1|2779948_2780092_+|hypothetical-protein
MSASFKNFDWRSPRWKIVTQRWKSMRFSSIQPKSAQLTCEQLIEAEP
>NZ_CP011382.1|WP_035153267.1|2780412_2781090_+|response-regulator-transcription-factor
MELSATSATAMKEPSMKDYKRLLLIDDDPNLILLVKDYLEFRGYEVVTAENGREALEILEQDIPDMIICDVMMPEMDGYTFVEQVRQTERTSWIPVLFLSAKGQSADRVKGLNKGADVYMVKPFEPEELVAQVESSLKQTIRWKEHQAKGGENGSRIQVPFDVQLTPTELKVVQFVARGLANREIAEELNVSQRTVESHVSNMLGKTNLHNRTELARWAIENQMA
>NZ_CP011382.1|WP_035158922.1|2781380_2782772_-|asparagine--tRNA-ligase
MVNRRIAEILRSGQAEEVIKIQGWVRTKRESKGFSFIEVNDGSSLASLQVIINQDVPDYEASLKKINTGASVEVSGVIVPSLGKGQRIELKAQTVQVYGEADPETYPLQKKRHSFEFLRTIGHLRSRTNSFGAVFRVRNACATAVHQFFQERGFMWVHTPIITASDCEGAGELFSVTSLNLKDIPRTPENNIDYSQDFFAKPTYLTVSGQLEAEVMAMAFSNVYTFGPTFRAENSNTSRHLAEFWMIEPEMAFCDLQGDMDLAEAFLKHIFKYVLEKCPEDMEFFNQRIDNTVLSTAENIIHNQFERITYTEAIKLLETADVQFEYPVSWGLDLQSEHERYLSEQLFKKPTIVTDYPAKIKAFYMRLNEDEQTVAAMDILAPKIGEIIGGSQREERLDVLERRVIAQGMQPQDLYWYLDLRRFGTVPHAGFGLGFERLVQFMTGMGNIRDVIPFPRTPQSAEF
>NZ_CP011382.1|WP_035153269.1|2782855_2783224_-|hypothetical-protein
MEQPQTPQEPLDEEYQEGDFAQELAEVERSLLALRERYAQVQSDRAQQEELQQYYQHIKHSKAPPAEIRDELRQIKQQLEVLEVSLESQLFSWGSIKEPFWQAIRFGGLGVIIGWILKSCAG
>NZ_CP011382.1|WP_035158925.1|2783268_2783547_+|hypothetical-protein
MSQFTQLPQNSQLNELSTLELAQALMARLTITPEDWHRLKSNRQARASEQTAAALVFLLKEQPQEALSRLEMATGWLDRSVSAPPCPSHGSK
>NZ_CP011382.1|WP_035153272.1|2783600_2784050_-|anti-sigma-regulatory-factor
MITISLRPVGRNWGTISFASTLYLCPILDLLLAEIPAKMQAELRLGLQEALVNAAKHGNNLDPSKTVVVRFSLIDNQYWWVISDQGSGFHPTCNCDTDPTEFLPPDESENGRGMSILHQIFDQVEWNRKGTELRLCKQLENRSRLSLKR
>NZ_CP011382.1|WP_035153275.1|2784668_2786039_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MTNWQQGELIELTIADLSDTGDGVGRWEERVVFVPDTVPGDRALVRLLHVKPTFAHAKLQEILQPSSHRIRPSCIVADKCGGCQWQHLDYAYQLQAKHNQVVQALERIGGFTNITVDPVLAASAPLGYRNKATYPVGMSRTGQVQTGYYQKGSHLLINLNQCPVQDERLNSFLREIKQDIQKHNWQIYNEELHTGNIRHLGLRIGRRTGEILLTLVVKNWHLPEIEKQAQLWLKRYPQLVGVALNCNPARTNAIFGQETRCIAGAAYLREEFAGLELQIRPDTFFQVSTETAEALLEVIQSELNLQGHEMLLDAYCGIGTLSLPLARFVKQVIGLELQDESVQQATLNAANNRIHNATFITGRVEELLPNLDCKPDIVLLDPPRKGCDRQVLETLLETKPQQIVYVSCKAATLARDLKILCQDNVYNITRVQPGDFFPQTAHVETAVFLRRSLSHQ

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Crispr_ID: NZ_CP011382_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_6

3152041-3152125

Orphan

Consensus_repeat	Method
CCTATGGTTGTTTTTGATAACAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_6

>merge|NZ_CP011382|6|3152041-3152125|CRISPRCasFinder
CCTATGGTTGTTTTTGATAACAAAAGTCACTCAAGATTTTAAATGTATACAATTGAGTTGCCCATGGTTGTTTTTGATAACAAAA

>NZ_CP011382|6|5|3152041-3152125|CRISPRCasFinder
CCTATGGTTGTTTTTGATAACAAAA	GTCACTCAAGATTTTAAATGTATACAATTGAGTTG
CCCATGGTTGTTTTTGATAACAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035153744.1\|3158022_3159672_-\|Ppx/GppA-family-phosphatase	unknown	unknown	gnl\|CDD\|223326
NZ_CP011382.1\|WP_035153720.1\|3136074_3136644_-\|heme-NO-binding-protein	unknown	unknown	gnl\|CDD\|377902
NZ_CP011382.1\|WP_035153724.1\|3138080_3139013_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176111
NZ_CP011382.1\|WP_035153732.1\|3152199_3153006_-\|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|184588
NZ_CP011382.1\|WP_035153716.1\|3124884_3126195_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|213754
NZ_CP011382.1\|WP_035153746.1\|3160161_3161043_+\|4-hydroxybenzoate-solanesyltransferase	unknown	unknown	gnl\|CDD\|237240
NZ_CP011382.1\|WP_035153742.1\|3157223_3157682_+\|lipoprotein-signal-peptidase	unknown	unknown	gnl\|CDD\|234739
NZ_CP011382.1\|WP_035153734.1\|3153120_3154020_-\|phosphate-ABC-transporter-permease-PstA	unknown	unknown	gnl\|CDD\|223654
NZ_CP011382.1\|WP_035153739.1\|3156589_3157177_+\|biotin-transporter-BioY	unknown	unknown	gnl\|CDD\|376871
NZ_CP011382.1\|WP_035153748.1\|3161047_3161395_-\|XisI-protein	unknown	unknown	gnl\|CDD\|341357
NZ_CP011382.1\|WP_082127323.1\|3139168_3140764_+\|mucoidy-inhibitor-MuiA-family-protein	unknown	unknown	gnl\|CDD\|274045
NZ_CP011382.1\|WP_046814811.1\|3133544_3136085_-\|response-regulator	unknown	unknown	gnl\|CDD\|236848
NZ_CP011382.1\|WP_035153736.1\|3154044_3154989_-\|phosphate-ABC-transporter-permease-subunit-PstC	unknown	unknown	gnl\|CDD\|223646
NZ_CP011382.1\|WP_168163475.1\|3151837_3152014_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035153726.1\|3140931_3141537_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035159019.1\|3141557_3146948_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_CP011382.1\|WP_035153718.1\|3127367_3133226_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226415
NZ_CP011382.1\|WP_035153737.1\|3155175_3156351_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	unknown	unknown	gnl\|CDD\|273374
NZ_CP011382.1\|WP_082127322.1\|3123467_3124676_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|130253
NZ_CP011382.1\|WP_035153749.1\|3161382_3161802_-\|fatty-acid-oxidation-protein-subunit-alpha	unknown	unknown	gnl\|CDD\|370136

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035153744.1\|3158022_3159672_-\|Ppx/GppA-family-phosphatase	gnl\|CDD\|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	1.65445e-160
NZ_CP011382.1\|WP_035153720.1\|3136074_3136644_-\|heme-NO-binding-protein	gnl\|CDD\|377902	pfam07700, HNOB, Haem-NO-binding. The HNOB (Haem NO Binding) domain, is a predominantly alpha-helical domain and binds heme via a covalent linkage to histidine. It is a haem protein sensor (SONO) that displays femtomolar affinity for nitrous oxide, NO. It is predicted to function as a haem-dependent sensor for gaseous ligands and to transduce diverse downstream signals in both bacteria and animals.	8.50319e-72
NZ_CP011382.1\|WP_035153724.1\|3138080_3139013_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176111	cd08419, PBP2_CbbR_RubisCO_like, The C-terminal substrate binding of LysR-type transcriptional regulator (CbbR) of RubisCO operon, which is involved in the carbon dioxide fixation, contains the type 2 periplasmic binding fold. CbbR, a LysR-type transcriptional regulator, is required to activate expression of RubisCO, one of two unique enzymes in the Calvin-Benson-Bassham (CBB) cycle pathway. All plants, cyanobacteria, and many autotrophic bacteria use the CBB cycle to fix carbon dioxide. Thus, this cycle plays an essential role in assimilating CO2 into organic carbon on earth. The key CBB cycle enzyme is ribulose 1,5-bisphosphate carboxylase/oxygenase (RubisCO), which catalyzes the actual CO2 fixation reaction. The CO2 concentration affects the expression of RubisCO genes. It has also shown that NADPH enhances the DNA-binding ability of the CbbR. RubisCO is composed of eight large (CbbL) and eight small subunits (CbbS). The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.29056e-114
NZ_CP011382.1\|WP_035153732.1\|3152199_3153006_-\|phosphate-ABC-transporter-ATP-binding-protein	gnl\|CDD\|184588	PRK14243, PRK14243, phosphate transporter ATP-binding protein; Provisional.	0
NZ_CP011382.1\|WP_035153716.1\|3124884_3126195_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|213754	TIGR02971, devB-like_secretion_protein, ABC exporter membrane fusion protein, DevB family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. DevB from Anabaena sp. strain PCC 7120 is partially characterized as a membrane fusion protein of the DevBCA ABC exporter, probably a glycolipid exporter, required for heterocyst formation. Most Cyanobacteria have one member only, but Nostoc sp. PCC 7120 has seven members.	7.31502e-74
NZ_CP011382.1\|WP_035153746.1\|3160161_3161043_+\|4-hydroxybenzoate-solanesyltransferase	gnl\|CDD\|237240	PRK12870, ubiA, 4-hydroxybenzoate octaprenyltransferase.	1.53133e-159
NZ_CP011382.1\|WP_035153742.1\|3157223_3157682_+\|lipoprotein-signal-peptidase	gnl\|CDD\|234739	PRK00376, lspA, lipoprotein signal peptidase.	6.66656e-53
NZ_CP011382.1\|WP_035153734.1\|3153120_3154020_-\|phosphate-ABC-transporter-permease-PstA	gnl\|CDD\|223654	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	3.60066e-91
NZ_CP011382.1\|WP_035153739.1\|3156589_3157177_+\|biotin-transporter-BioY	gnl\|CDD\|376871	pfam02632, BioY, BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is a component of the BioMNY transport system involved in biotin uptake in prokaryotes.	3.56267e-29
NZ_CP011382.1\|WP_082127323.1\|3139168_3140764_+\|mucoidy-inhibitor-MuiA-family-protein	gnl\|CDD\|274045	TIGR02231, Hypothetical_protein_ZK1055.6b, conserved hypothetical protein. This family consists of proteins over 500 amino acids long in Caenorhabditis elegans and several bacteria (Pseudomonas aeruginosa, Nostoc sp. PCC 7120, Leptospira interrogans, etc.). The function is unknown.	2.21581e-171
NZ_CP011382.1\|WP_046814811.1\|3133544_3136085_-\|response-regulator	gnl\|CDD\|236848	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional.	3.80848e-131
NZ_CP011382.1\|WP_035153736.1\|3154044_3154989_-\|phosphate-ABC-transporter-permease-subunit-PstC	gnl\|CDD\|223646	COG0573, PstC, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism].	2.3529e-101
NZ_CP011382.1\|WP_035153748.1\|3161047_3161395_-\|XisI-protein	gnl\|CDD\|341357	cd16382, XisI-like, XisI is FdxN element excision controlling factor protein. This family contains XisI proteins, also known as FdxN element excision controlling factors, and similar proteins. FdxN element is excised from the chromosome during heterocyst differentiation in cyanobacteria. This is accomplished by the large serine recombinase XisF (fdxN element site-specific recombinase). The xisH as well as the xisF and xisI genes are required. XisI may function as recombination directionality factor (RDF), and needs XisH which may function as an endonuclease.	3.46706e-57
NZ_CP011382.1\|WP_035159019.1\|3141557_3146948_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0
NZ_CP011382.1\|WP_035153718.1\|3127367_3133226_-\|AAA-family-ATPase	gnl\|CDD\|226415	COG3899, COG3899, Predicted ATPase [General function prediction only].	0
NZ_CP011382.1\|WP_035153737.1\|3155175_3156351_-\|phosphate-ABC-transporter-substrate-binding-protein-PstS	gnl\|CDD\|273374	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88., phosphate ABC transporter, phosphate-binding protein. This family represents one type of (periplasmic, in Gram-negative bacteria) phosphate-binding protein found in phosphate ABC (ATP-binding cassette) transporters. This protein is accompanied, generally in the same operon, by an ATP binding protein and (usually) two permease proteins. [Transport and binding proteins, Anions].	1.1492e-129
NZ_CP011382.1\|WP_082127322.1\|3123467_3124676_-\|FtsX-like-permease-family-protein	gnl\|CDD\|130253	TIGR01185, membrane_spanning_subunit, DevC protein. This model describes a predicted membrane subunit, DevC, of an ABC transporter known so far from two species of cyanobacteria. Some experimental data from mutational analysis suggest that this protein along with DevA and DevB encoded in the same operon may be involved in the transport/export of glycolipids. [Transport and binding proteins, Other].	0
NZ_CP011382.1\|WP_035153749.1\|3161382_3161802_-\|fatty-acid-oxidation-protein-subunit-alpha	gnl\|CDD\|370136	pfam08814, XisH, XisH protein. The fdxN element, along with two other DNA elements, is excised from the chromosome during heterocyst differentiation in cyanobacteria. The xisH as well as the xisF and xisI genes are required.	4.4149e-77

>NZ_CP011382.1|WP_168163475.1|3151837_3152014_-|hypothetical-protein
MSDYSVENLQSMGFHSNYETDKNSQTLVKSGLIDYLANLLQSKYWELGLLDLQHFWEY
>NZ_CP011382.1|WP_035159019.1|3141557_3146948_-|AAA-family-ATPase
MTPTAPQFPAISGYTLTEQLYLGSRTAVYRAVQNNQQLPVVIKVLQREYPTFGELVQFRNQYAITKNLHVAGIVQPLTLETLRNSYALVMADWGGISLEQYIQQHQLDLTEKLAIALQITDILHELHSCRVIHKDIKPANILIHPESKQVKLIDFSIASVLPKETQEIQNPNTLEGTLAYLAPEQTGRMNRGIDYRSDFYALGVTLYQLLTGRLPFTTDDPLELVHCHIAKIAVPLNEVSTDVPEMVGAIVAKLMAKNAEDRYQSALGLKHDLGECLSQWKETGSITEFELGQKDLCDHFNIPEKLYGREEEVKTLLEAFDRVAQGASEMMLVAGFSGIGKTAVVNEVHKPIVKQRGYFIKGKFDQFNRNIPFSAFVQAFRDLMGQLLSESDVQLQTWKTQIIEALGENAQVIVELIPELEQIIGNQPPAPELSGTAAQNRFNLLFQRFIQVFTTPEHPLVMFLDDLQWADSASLNLIQVLMSEVKASCLLLLGAYRDNEVFPAHPLMLSLSDMEKAGAKINTITLKPLTFSSLNYLVADTLHAGLGVVKPLTELVMQKTQGNPFFVTQFLKVLYQDQLITFDQDAGHWQCDIVQVQDAALTDDVVEFMAQQLRKLPETTQEMLKLAACIGAQFDLEILAIVSERSQTDVATALWKALQEGLILPQSDLYKFYVGEAQATEDQPNETLNYKFLHDRVQQAAYSSILEECKAPIHYRIGRLLLTHFSSDTYEERIFEIVGHLNLGSDVTSDSLELLELARLNLLAGRKAIDSTAYAAALTYLNRGIELLPEDCWEKHYTLTLDLHHRRLDAAYLNTEFENLEAWGELVLKQANSLLDCIKVYETRIMALRSQGEFLQVVEIGLQVLKQLGVEFPPHPTPADIGAAYERSRQSWQGREPLSLLELPTMEDPQMLAAMQILTKLVPSAYIASPFLVPLLIFKQVELSIQYGNSQISIFSYADYSLILCGIMGDISTGYKFGQLSLTLLEKLQITSFKSRAYLVVSTFTRHWQEPLHDVIPSLLAGYLSGLESGDWECVALNLSTYSYYKYWAGGELQELKTEMLAYRQVMEQVKQQATLLSHEVYLQAVLNLLGDAQVPYHLQGEIFDAEQLIPSLERQNDLAGLFHIYLNQAWLCYLFEQNEQAVQLAALLEKYSNGVCGLFLIPIWKYYDALIQVRCYPNAEPEQQALILERITADQEQLKGWATHAPFNHKHRWQLIEAETYRVLDQKVEAIAHYDMAITSAQAHRFIQDEALANELAAKFYLDWGKEKVAASYMQEAYYCYSRWGAKAKVADLETRYPNLLRPILQAAEVSAGSWNTLMTISPLTASIHSSSHKSSSNTSINQAFDFAAILKASQALSSTIELDQLLHQLTQIILQNSGGDRCALILPNEAGEWQVQAIATLEDTQIYTEPLTNNPNLPVKLIQYVKNTQKTVVINELKTDLPVIDDYLMERQPKSVLCLPLLNQGQLIGILYLKNQFTIGAFTSDRVEVLNFLCTQAAISLENARLYQKAQEYAQQLEQSQMQVVQSEKMSALGNLVAGVAHEINNPIGFLNGSISNAKDYVQDLFEHLETYQKQQPPNDVVQESAEEIDLEFLSSDLPKLLDAMKGATDRIKGISTSLRTFSRADTDRKVSANLHEGLDSTLLILKYRLKANENRPAIKITQNYGDLLTIECFPGQLNQVFMNILANAIDMFDEMAQTQTYQDIEANPQEISIRTSVESNHVYIRIHDNGKGMTEEVQAKIFDHLFTTKAVGKGTGLGLAIARQIVVEKHGGSLNVWSEPGKGTEFCIALPIS
>NZ_CP011382.1|WP_035153726.1|3140931_3141537_+|hypothetical-protein
MKQSLINQRNSSAQLMKAGIFLALLFGSLGVIGGGFYFSQIFSPATKTKMINNSSHYREIRHKLWSNSTQIQHFPSDISPAAKNVSLSYSPGGSQTNSFFQVRMKLSPSEIQKILLTYRPQAQRVYHGGNTNDHANLPKGIPTTFFYTSNTTEDSFPPSYEILVLGANDRGNTNFPWNHGDSYGVAIDSSTSDIVYWAEAW
>NZ_CP011382.1|WP_082127323.1|3139168_3140764_+|mucoidy-inhibitor-MuiA-family-protein
MRQILESQIINVTVYTDQALVTRRSVVSLTGQEQELAIAHLPVTLQPESVRVKGKGSMVVQILGVSTERTFFTEPVAPRVAQITQQIQQLEAQKRNLQAQIDALALQSSFIQGLREKTGEQFSVGLARKNLSLSEVLDFVNFLGSQYSEYAIATEDYKNQQREIEKQLQALRKQLQQVQTPEPQESINVLVEIQSAGAGELELEVSYVVNHASWHPLYDLRVDSQSQTVNLGYLAEIQQNTGEDWQDVNLTLSTAKPGLGTLPPQIQPWYIDIFRPSPPMMTRSIMPMAAPAASRGMDEAASLEAESLDMDGIVPITAAGVEVSKQGSVVTFKLAGGGNIPSDGSPHKKTIFHENYPCRFQYIAIPRLVSFAYLEAQVKNPGDGATLLPGNANIFRDQMFVGTTELANIAPGEDFSVNLGIDEGLKIVRNLVERVADKKLLGSYRKVTFAYRLSITNLLDQEATFKVTEQLPVSRNEQIKVRLLRSQPSIQLGEMGILEWVLVLPAQGKQELYYQFTVEYPPEIGIIGLDI
>NZ_CP011382.1|WP_035153724.1|3138080_3139013_+|LysR-family-transcriptional-regulator
MNQATLHQLKVFEAAARHGSFTRAAEELFLTQPTVSMQIKQLTKSVGLPLFEQVGKRLYLTEAGRELFATCRQIFETIAQFEMKVADLKGLKQGQLRLAVITTAKYFIPRLLGPFCQLYPGIDIALQVTNHEGILERMTNNMDDLYIMSQVPDHLDVSYEQFLENPLVVLAPTNHPLVGEKNISIQRLGEEPFIMREPGSGTRRSIQKLFDEHGIEVKVKLELGSNEAIKQAIAGGLGISVLSRHTLIPDTGDLVILDVENFPIKRSWYMVHPSGKQLSIVARTYFEYLLDASRKLADRQFNYHEKVTVG
>NZ_CP011382.1|WP_035153720.1|3136074_3136644_-|heme-NO-binding-protein
MYGLVNKAIQDMVCKNHGEETWETIKQKAGLEDIDFFISMDAYSDDITYRLVEAACEVFGMPAEDILKAFGEYWVTYTAEEGYGELLDSAGDSLPQFVENLDNLHARVGLSFSELRPPSFDCEHTSEKSMELHYQSTRKGLAPMVIGLLHGLGKRFHTKVDITQTSSREEGAAYDSFSIEYDSSQSHDN
>NZ_CP011382.1|WP_046814811.1|3133544_3136085_-|response-regulator
MTTEPPTQFQQLQFSLDFEQFASLFPFHLVINREMKIIQIGQVLQRIFEPLNLLGSPLDIYFQINRPKCLNTFEAILDQRRSLFLLQCHHQDIQLKGQMVYVENGDSLLFLASPWITDISDLKKLGLNINDFPLHDSVSDYLFLLQAKNTALADAKKLNTKLTAQRSELRKSEEQLKLALDAVEEGLWDWNLQTGEVYRSKHWFTILGYEPDELTKDIKARNSLIHPDDRSRMQKQLIAHIHGKNPVYEAEIRLLTKSGEWKWILDRGKVVNRDRRGKPLRMVGTHLDISDRKQAEEALKLAKQAAEAANSAKSDFLAMMSHEIRTPMNGIIGMADLLANTPLQPEQNDYLQTIRNSGDALLTIINDILDFSKIESGKLELEESLFDLRVCVEEVLDLLAPQAASKNIELIFHLEPHTPTQIIGDITRLRQIICNLVSNAVKFTTVGEIIVTVSTHRQIPAETSYPCNCELQFAISDTGIGIPGDRLNRLFQPFSQVDASTTRRYGGTGLGLAISKRLAEIMGGSMWVESKEGKGSTFYFTTNFQVHGSSFKKTHVEPEFAGKQLLLAIDNTKLRLCLTRQLQSMGLKVQAVESSTMILPIVEENFFNAAIIDIDSPQFNNLDLIQKIRVIPQQQDLPLVILSYQAKQHLELQPIAAEFTAFLQKPVRHYQLYNTALQIIRGIWSIKSQNTHTEILSYSRTAPNNISINNTQIAKILPLKILLVEDGLVNQKIALKLLERLGYQADVANNGLEAVKAVQNQTYDLVFMDVQMPEMDGLEATRYIRQEISLNKQPQIIAMTANARPEDRQECLNAGMDDFISKPIRLDAIEVVIKKISIPDGETYSS
>NZ_CP011382.1|WP_035153718.1|3127367_3133226_-|AAA-family-ATPase
MITTQVSISGYKVGEQLYDGSRTQVYRCIREADSLPVVIKLLKNSYPSFNELLQFRHQYTIGKSLLHPRIVQTYSLESCQNSYGLVMEDFGGISLKDYFTKNHHAPSLEEFFQIAISLCETLDVLYRHRIIHKDIKPSNILINPKTKEIKLIDFSIASLLPRETQEIKSLNVLEGTLAYIAPEQTGRMNRGIDYRSDLYSLGVTFYELLTGELPFICDDAMELVHCHIAKKPPSIPSQKIPQVLDGMIQKLMAKNAEDRYQSALGLKYDLEKCLVQLQENGRIESFPIAQRDLCDRFLIPDKLYGRETEVETLLEAFVRVASVKEKGVSNGVTEMVLIAGFSGIGKTAVVNEVHKPIVRKRGYFIKGKFDQFNRNVPLSAFVQAFRNLLGQLLSESDAQLGVWRSQILEAIGTEGQVLIEVIPELQRLIGVQPGVEALSGMAVQQRFNRLFQQFLGVFTRPEHPLVLFLDDLQWADNASLKLLQLLMEDGGNLLILGAYRDNEVSPIHPFVQTVEEVVKAGHTVNTITLKPLELSQINRLVADTLGCDGVVAAPLTELIAQKTQGNPFFTTQFLLGLHQDGYITFNREAGIWECDIVQVRSLALTDDVVAFMVQQLQKLPASTQIALQRAACIGSQFDLKTLAIICEQTEHQAAEALWSAIQGGLILPINENYKFFHSEQQVKNQENLTVPYKFLHDRVQQASYALIAEEQKQIVHRTIGQLLWQNTPESERESQIFHIVNQLNQGDNENLSVAEGVFLAELNLMAARKARQSTAYGTALNNGRVGIGYLPDDAWQTQYSLTLALHTIVVETAYLSGDFTGMEAWAAITLPHCQTILDSIPIQESKILACLAQQQPTEAIAIGLESLKLLGVDIPAAPTQEDFQEILQATVMQLGEVGMENLLDIPPMDNPQIEAAMGILIKIGAACMSVNPLLSLMGTLTQVQLSLKHGHNSLSAIGYSYYVILLYSIFNDFDAAFRLSNIALELSQRFFSKTAAAQVLIGSGIFARHWKVHLREALPLLRQGTEYGVESGEYDFTSWGYFTEGWILYFMGTELSEVENFLQQKSAAIAAMKQSMQLSYNQALHQATLNLMGEEVEDVCTLTGSAFNEAEGFARHQRTGEMSALFCGYLHKLILSYRFGRYKQAIAMSEAAFQYVAAAGVQTGLAPLYWFTTLAQLAVYDNTNPEEQAAILERVDSHYTTIQHWASHAPMNYAHYADLVAAEKYRCLGETTKAITHYGRAIQGAKENGYLQDEALANELTAKFYLGWSQEKAALGYMQEAYYCYARWGAKAKTDDLEERYPQLIQPILHHQQITLNPWETIATIAFPRTSSSTRTSTTGSTSISHTLDFSSILKAAQAISSSIQLEELITNLTQIILENSGAKKSVLILPHNHTWQVRAITFLNSQARIQTTIDSQSVDTCPDIPRKIINYVRNTQEIIIIDDCQTDIPGLIGEYILEHQPKSVLCTPIMNQGHLVGILYLENQIASGVFTKERMQVINLLSSQAGISLDNCQLYTQQQEKIREIAEKESEYRSIFECVNDGLSICDLETGKIVANNPMIYQMHGYTQEEWQYLTPGDFLHSDSVHVFSNFLETIKLGKHFYAQGIAKRKDGSFFDFEVKAVPFIYKGKLHGLTILRDISQQQREQRERQKAELSVQQKSQELEQALQELQQAQLQIVQNEKMSALGNLVAGVAHEMNNPLGFISATLKQAKPTLADITEHLKLYQGSVENPDTEILEHAAEIDLEYTLEDFPKMLDAMVIACDRLKNISTSLRTFSRADKDYKVPFNLHEGIDSTILILKHRLKANEQRPAIEVVSEYGSLPKIDCFPGQLNQVFMNILANAIDALDESNTGRSFEEIKVNPNKIIIKTSIVDNQVQISIADNGKGMSESIKEKIFDHLFTTKAVGKGTGLGLAIAKQIIEETHGGKLQCDSVLGEGTVFIISIPISQSI
>NZ_CP011382.1|WP_035153716.1|3124884_3126195_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MSRVREESNSQESRKKPVESDRRWLGIAIAIPLVIATGVLSVAKIEQLRKVDTPVSNQPSVTTINALGRIEPRGEVVKLSAPTGAAGRVEQLLVREGEKVRKGQVIAILDSFAGNKAAVEEARAKLQESRANFVSIRTGSPKDIQAQGSVISRLQAQLRGEREAQQATINRLEAQLQGQREVLKATVRRVGAEQRNAEVDAQRYDYLYKAGAISQQERDRRRLSATSSSEQLAESKANRQQTIATLQQQIVEARVNRDKTIATLQQQIEEERTRLSKIEQVNPSNVQIAQAQVNNAIALMRKAEAQLRLSYVMSPINGEILKIYTKAGEIMTANGIAEIGRTDQMIVVAEVPEDSISKIRLGQTANISSENNAFNGTLQGTVAEIGRKIGKKDVLNNDPAADVDARVVEVKIALSPGDSEKVSGLTYAKVVVAINL
>NZ_CP011382.1|WP_082127322.1|3123467_3124676_-|FtsX-like-permease-family-protein
MLKRLFSQLRQILPDIFNLNDKIPLAWLQLKREKTRLAVALAGIAFADILMFMQLGFQDSLYFSNVRFHTSLKGDIVLINPQSSALLSMKPISQRRLYRAMDLKSVASVSPVYIDYTSWKNPVTGIPRNLLVIGINPENDILDLPGLKENIDKIKLSDVVLFDRSSRTEYGPIVKDFESGKIVTAEVRRRLVTVGGLFNLGTSFGADGNLITSDINFLRLFPIRQQGLIDLGLIKLKPGYNADEVAEELRKYFTSDILVLTKEQYINKERTFWATSTAIGFIFTLGTIMGFIVGTVIVYQILYTEVADHLVEYATLKAIGYTQKYLLIVILQEAFILALLGYIPGFFVSMLLYKTAREATLLPIYMSALRSFQVLILTIIMCFISGAIAVKKLRYADPADIF
>NZ_CP011382.1|WP_035153732.1|3152199_3153006_-|phosphate-ABC-transporter-ATP-binding-protein
MATNVRVQQQTETVLHTEGLNVYYGNFLAVRDIWMNIPKNRVTAFIGPSGCGKSTILRCFNRLNDLVESFRAEGSIYYYGENLYAPQIDPVEVRRRIGMVFQRPNPFPKSIYDNIAFGPRLNGFKGDMDELVERSLKQAALWDEVKDKLRQSGYSLSGGQQQRLCIARAIATQPDVILMDEPCSALDPISTLRVEDLIHELKEQYTIIIVTHNMQQASRVSDMTAFFNVQASEKGGRTGYLVEFDRTENIFQNPQQEATKEYVSGKFG
>NZ_CP011382.1|WP_035153734.1|3153120_3154020_-|phosphate-ABC-transporter-permease-PstA
MSSTYRDQPPPFVPGSLNHSRLSPRTLFSNIMTGLAFLCGILSILPLVAVLSYVLIQGFSSLSLNLFTELPPPPLVKGGGFGNAIIGTLIMVGIGALISIPLGVLAAIYLTEFSSGKIAYWVRFATNVLSGVPSIIAGVFAYGIVVATTGGFSAFAGGFALSILMLPIIVRTTDEALQLVSNDLRQAAKGLGATNFQTVMWVVLPAALPAIVTGTTLSIARASGETAPLLFTALFSQFWSNSLFAPTASLAVLVFNFAISPFKNWQALAWAASLILVLMVLITSIIARWATRQTTHTAH
>NZ_CP011382.1|WP_035153736.1|3154044_3154989_-|phosphate-ABC-transporter-permease-subunit-PstC
MSSSVQNHQIQPRSKLDKSLDVGFIGLTRLFALAIAGTLLWIAVQVAIQAMPAIQKFGLTFLTESSWNPVTNDYGVLPQVYGTIASAFIGLLISVPIGVGTAILLSENLLPKPVRTVIVFLVELLAAIPSVVYGVWGIFVLVPIITNVGKWLHSSLGWIPFFSTSPTGPGLFPAGVILAIMTLPIITAISRDALISVPPSLRQAAMGLGATRWETIFQVLIPAAFSGIVSAVMLALGRAMGETMAVTMLIGNSNNISASIFAPANTISSLLANQFAEASGLQVGALMYAALVLFVLTLIVNILAQLIVVRMKRI
>NZ_CP011382.1|WP_035153737.1|3155175_3156351_-|phosphate-ABC-transporter-substrate-binding-protein-PstS
MLFRNPVTNKSRLARVASVLALTMSLAACSGGTQDNNAANEATPGAAKDATASSPAKLDLGGNVSLTGAGASFPAPLYQTWFQGLNKKYPNLQVNYQSVGSGAGVEQFTKGTVDFGASDVAMKDEEIAKVEKGVMMLPMTAGSIVLAYNLPDVAELKLPRTVYVDILLGKIKSWDDAAIAKANPGVTLPKEPITVVYRSDGSGTTGVFTKHLSAISPEWKTKVGDGKSVKWPVGVGAKGNEGVTAQVAQTKGSIGYIEYGYAKQNSLKFAALENKAGKFVVPNDASASKTLESVTLPENLRAFISDPEGEASYPIVSFTWILAYKQYPDAVKAKAIEAMIEYGLTDGQKLAVELGYVPLPQNVIQKVAAAADAISPEYKISVTGNSNSASK
>NZ_CP011382.1|WP_035153739.1|3156589_3157177_+|biotin-transporter-BioY
MLTTSNQLLWSMIGLLLTMGGTFLEAHITTLPWSWGEQGLHSLSLGVTFQIGGVLLVGCLGGKNAGALSQIAYIVMGLTLLPVFADGGGIGYIKLSQFGYLLGFIPGAWICGLIAFKAKPKLETLAFSCVCGLLSVHLCGISYLVISYILQLKGTETMSLMQAIERYSWFAIPGQLSVVCVVTLIAYILRHLMFY
>NZ_CP011382.1|WP_035153742.1|3157223_3157682_+|lipoprotein-signal-peptidase
MRLRNRIFWITAVSAFIIDQLTKYWVVQTFDLQQTLALLPGVFHFTYVINTGAAFSLFSGKVEWLRWLSLAVSLGLMALAWFSRWLTFWEQLGYGFILGGALGNGLDRFALGYVVDFLDFRLINFPVFNIADVCINIGIACLLISAWQKPPK
>NZ_CP011382.1|WP_035153744.1|3158022_3159672_-|Ppx/GppA-family-phosphatase
MVNLVSALLKSVSTPAVEQHRIIAAIDMGTNSLHMVIVRIEPSLPAFSIIGREKETVRLGDRDLVTGNLKPEVMARAIASLHRFQEVAKTLNVETVIAVATSAVREAPNGKDFLQQVESELGLKVDLISGQEEARRIYLGVLSGMEFNNQPHIIIDIGGGSTEIILGDSNEERTLTSTKIGAVRLTGELIATDPLSAAEFQYLQAYARGMLERSVEEVLAHLRFGEHPKLVGTAGTIETLALINVREKTGMVPSTLNGYQFSLKDLQEWVNRFRKMTNAERAAIPGMPEKRSEVILAGAVILQEAMTLLGVENITVCERSLREGVVVDWMLTHGLIENRLRYQGSVRQRSVLKVAKKFQINLEHSDRIAVFALSIFEQLQGILHNWGDEERQLLWAAAILHNCGHYVNHDSHHKHSYYLIRNGELLGYNETEIEIIANIARYHRKSPPRKKHENYGNLLHKEHRRMVNHFSAILRLAVALDRRQIGAIVSVECLFNPSTRELLLRLLPSHPDDDCALEIWSLDYKKGVFEEEFAVKVRTQLESSIAAFN
>NZ_CP011382.1|WP_035153746.1|3160161_3161043_+|4-hydroxybenzoate-solanesyltransferase
MLSTPEINQESLVSRVFRLLRWNKPEGRLILMIPALWAVFLAAGGKPPLPLVGVIILGTLATSAAGCVVNDLWDRNIDPEVERTRDRPLASRALSIQVGIIVAVVAMACAAILAFYLNRLSFWLSVAAVPVILLYPGAKRVFPVPQLVLSIAWGFAVLISWSAVTQNISLPTWLLWGATVLWTLGFDTVYAMSDREDDRRIGVNSSALFFGNYASVAIALFFAGTTLCLGWMGWQIHLHVAFWITLGIATAAWIWQVIRLMQPELPNSSYAEMFKQNVWIGFVILAGMIFGNF
>NZ_CP011382.1|WP_035153748.1|3161047_3161395_-|XisI-protein
MEKVENYREYIKFLISDYAANRTSNHSDNDLEMQQVFDTQHDHYQLIYIGWDKKGRRIFGPVMHLDIKNGKIWIQWNGTEDDIAAELVAMGVEKEDIVLGFHSPYMRQFTDFAVG
>NZ_CP011382.1|WP_035153749.1|3161382_3161802_-|fatty-acid-oxidation-protein-subunit-alpha
MSAKDKFHYAVKVALEKDGWTITDDPLYIPLERITGMYIDLGAEKLIVADKENQQIAVEVKSFLGASTISEFHTAIGQFTNYRYALADYQPERILFLAISNKIYEDFFTTPFIQSVIQRSQINLLIFNPGTEEIVAWKK

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Crispr_ID: NZ_CP011382_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_7

3181662-3181757

Orphan

Consensus_repeat	Method
TTGGATCCCCCTAAATCCCCCTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_7

>merge|NZ_CP011382|7|3181662-3181757|CRISPRCasFinder
TTGGATCCCCCTAAATCCCCCTTGGAAAGGGGGACTTTGAGAGTTAAGGTTTTGGTGTTGCTAGTTGAGTATCATGGATCCCCCTAAATCCCCCTT

>NZ_CP011382|7|6|3181662-3181757|CRISPRCasFinder
TTGGATCCCCCTAAATCCCCCTT	GGAAAGGGGGACTTTGAGAGTTAAGGTTTTGGTGTTGCTAGTTGAGTATC
ATGGATCCCCCTAAATCCCCCTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035153799.1\|3192323_3194672_+\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP011382.1\|WP_035153791.1\|3187081_3188140_+\|GTP-binding-protein	unknown	unknown	gnl\|CDD\|223597
NZ_CP011382.1\|WP_035153793.1\|3188391_3189042_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
NZ_CP011382.1\|WP_035153788.1\|3186499_3186757_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035153770.1\|3176728_3177505_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226983
NZ_CP011382.1\|WP_035153761.1\|3170165_3171443_-\|adenosylhomocysteinase	unknown	unknown	gnl\|CDD\|235488
NZ_CP011382.1\|WP_035153801.1\|3195059_3196316_+\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|236844
NZ_CP011382.1\|WP_035153786.1\|3184632_3186486_+\|threonine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237050
NZ_CP011382.1\|WP_035153762.1\|3172058_3172322_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035153772.1\|3177518_3178199_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP011382.1\|WP_035153797.1\|3190479_3192327_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|335962
NZ_CP011382.1\|WP_035153781.1\|3181223_3181595_-\|endonuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|238509
NZ_CP011382.1\|WP_035153766.1\|3173741_3174920_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP011382.1\|WP_035153779.1\|3179182_3180607_+\|serine/threonine-protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011382.1\|WP_035153764.1\|3172487_3173639_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340839
NZ_CP011382.1\|WP_035153768.1\|3175814_3176666_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP011382.1\|WP_035153785.1\|3183823_3184405_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372967
NZ_CP011382.1\|WP_035153783.1\|3182176_3183820_-\|trypsin-like-serine-protease	unknown	unknown	gnl\|CDD\|238121
NZ_CP011382.1\|WP_035153795.1\|3189421_3190189_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035153777.1\|3178767_3179094_+\|YbjQ-family-protein	unknown	unknown	gnl\|CDD\|376657

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035153799.1\|3192323_3194672_+\|tetratricopeptide-repeat-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	1.10027e-16
NZ_CP011382.1\|WP_035153791.1\|3187081_3188140_+\|GTP-binding-protein	gnl\|CDD\|223597	COG0523, COG0523, Putative GTPases (G3E family) [General function prediction only].	2.30165e-111
NZ_CP011382.1\|WP_035153793.1\|3188391_3189042_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	5.77844e-119
NZ_CP011382.1\|WP_035153770.1\|3176728_3177505_+\|hypothetical-protein	gnl\|CDD\|226983	COG4636, Uma2, Endonuclease, Uma2 family (restriction endonuclease fold) [General function prediction only].	1.18118e-14
NZ_CP011382.1\|WP_035153761.1\|3170165_3171443_-\|adenosylhomocysteinase	gnl\|CDD\|235488	PRK05476, PRK05476, S-adenosyl-L-homocysteine hydrolase; Provisional.	0
NZ_CP011382.1\|WP_035153801.1\|3195059_3196316_+\|glycosyl-hydrolase	gnl\|CDD\|236844	PRK11097, PRK11097, cellulase.	1.90879e-45
NZ_CP011382.1\|WP_035153786.1\|3184632_3186486_+\|threonine--tRNA-ligase	gnl\|CDD\|237050	PRK12305, thrS, threonyl-tRNA synthetase; Reviewed.	0
NZ_CP011382.1\|WP_035153772.1\|3177518_3178199_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	5.54048e-14
NZ_CP011382.1\|WP_035153797.1\|3190479_3192327_+\|hypothetical-protein	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	2.09547e-05
NZ_CP011382.1\|WP_035153781.1\|3181223_3181595_-\|endonuclease-domain-containing-protein	gnl\|CDD\|238509	cd01038, Endonuclease_DUF559, Domain of unknown function, appears to be related to a diverse group of endonucleases.	2.16666e-42
NZ_CP011382.1\|WP_035153766.1\|3173741_3174920_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	4.70574e-58
NZ_CP011382.1\|WP_035153779.1\|3179182_3180607_+\|serine/threonine-protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	2.05542e-64
NZ_CP011382.1\|WP_035153764.1\|3172487_3173639_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340839	cd03811, GT4_GT28_WabH-like, family 4 and family 28 glycosyltransferases similar to Klebsiella WabH. This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.	4.55807e-49
NZ_CP011382.1\|WP_035153768.1\|3175814_3176666_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	7.03228e-112
NZ_CP011382.1\|WP_035153785.1\|3183823_3184405_-\|hypothetical-protein	gnl\|CDD\|372967	pfam14218, COP23, Circadian oscillating protein COP23. This family includes the circadian oscillating protein COP23 from Cyanothece sp. (strain PCC 8801). The levels of this peripheral membrane protein display a circadian oscillation.	8.50215e-31
NZ_CP011382.1\|WP_035153783.1\|3182176_3183820_-\|trypsin-like-serine-protease	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	2.66049e-125
NZ_CP011382.1\|WP_035153777.1\|3178767_3179094_+\|YbjQ-family-protein	gnl\|CDD\|376657	pfam01906, YbjQ_1, Putative heavy-metal-binding. From comparative structural analysis, this family is likely to be a heavy-metal binding domain. The domain oligomerizes as a pentamer. The domain is about 100 amino acids long and is found in prokaryotes.	5.10451e-37

>NZ_CP011382.1|WP_035153781.1|3181223_3181595_-|endonuclease-domain-containing-protein
MTNQLNSSDFHLPYNPKLVERAKELRKNMTPAEKKLWHEYLKSFKFRVLKQRPIDNFIVDFYCPALRIVIEVDGESHFTNAGQEYDIERTKILEGYGLKIIRFTNTQVLNQFSSVCEQIQSFT
>NZ_CP011382.1|WP_035153779.1|3179182_3180607_+|serine/threonine-protein-kinase
MIGQILDGRYQIIQELGRGGFGETFVAIDTKRPGNPHCVVKQLQPKSTHPRALELGERLFRQEAEKLENLGNHDQIPRLLAYFQERGEFYLVQEFIPGSDLTKELPPGVQLSETYVIRLLQEILEVLAFVHQSNLIHRDLKPSNIRRRQSDQKIVLIDFGAVKEVTSQEINAEGKTKFTIPIGSPGYMPNEQANGQPKFSSDIYAVGIIAIQALTGINPDPRALNGGITTDTSTGEIAWKHRVAVNSRLGAVIDKMVRANHLQRYQNAAEALQAITSLTNNSHSNNPTRFLGKWWLGIGLVGVVIPALVWWMTSQIKPPFKMLNYSNYGINIKYPEMWRKREDGFSDGVKFFPSAANQAQNCTTEISVNRSNLAQKILSLDEYKKSVIRQLKESNPQGKVTESSTYLTPESFDAYKLVYNRKEDNCNFQIMEIGTVRNAKAYVVIYSAPPSEYEKYLPIAEEMINSLTIVNTSD
>NZ_CP011382.1|WP_035153777.1|3178767_3179094_+|YbjQ-family-protein
MILTTTDVIQGRVIDSYLGIVTAEVVYGSNFLRDFFASIRDVIGGRTASYERLFEEGQRKAFAELEQRAARLGANAIVGIEVDTGTINVDQSGVLILITATGTAVKIK
>NZ_CP011382.1|WP_035153772.1|3177518_3178199_-|tetratricopeptide-repeat-protein
MYNRTSLLISIFLLGGITTIVPTAAEAQVLVAQKSTQRVRELLNEGRKLVDAGDYNGAIAIYQQAASLEPKNASIHSGIGYLYAIQNNMRASLAAYKRAVALNPNNGDYQYALGYVSATLGDIKGAKNAYRQAIQANRNHVNAYLGLATILMRQGEYENAGWAYVQLAKLDPRNPQVYELRGNILKKYGKAKEAIAYFKKARDAYAQQGKQDSVARVEAVLKQIGG
>NZ_CP011382.1|WP_035153770.1|3176728_3177505_+|hypothetical-protein
MYQPIPPRPPWETLPTMYDLPSELIGESGLPDEFHIFQPRLLNETCQPGNYPESEILLATDLNLYYDPRHFLWYKRPDWYLVLGVSRSTEQQSSRLSYVVWQEGVNPFLIVELLSPGTEGEDLGQTLREVNQPPTKWEVYERILRVPYYVVYDRYENNFRAFRLSGACYEPVALSESGLWLPEIGLGLGLWQGSYEGMTGLWLRWYDGQGWIPTQVERIEQERQRAETERQRAETERQRAEKLAEYLRSQGINPDELP
>NZ_CP011382.1|WP_035153768.1|3175814_3176666_+|ABC-transporter-ATP-binding-protein
MSVALSLENVHKVYNNRAVVNDLSFSIQAGEMFGLLGPNGAGKSTTIRMLTTLTKATQGKIEIFGYDVARQPMLAKQSIGVVLQQISVDGDLTVWENMELQGRLHHIPNPQRQRVINQWLEYVELTEKRHDLVKTLSGGMKRRLQIARALLHQPQILFLDEPTVGLDPQTRRRLWEIIRDLNKQGMTMLLTTHYMEEVEYLCNRIGIMDSGNLISLGTLPELRSRYGEGLVMKQVEDRWEYLFFPTLQAANTYLDEQEDKTGMMVRPSNLEDIFVELTGRQLD
>NZ_CP011382.1|WP_035153766.1|3173741_3174920_-|glycosyltransferase-family-4-protein
MGVECTKITQMSKPASILCLGLGWFPLTPGGLERYVYELTQRLVANHDQVELCGLGLPDTDEDSPIKFTNLATPDSSIVKRLWAIRSNFQKTRISQPDAVNLHFALYSLPILDLLPKNVPITFNFHGPWASETQEEVVRAGLGQILKRYVVEQRTYNRCDRFIVLSKAFGKILHNNYQIPWEKIYVIPGGVDIQHFQPCLSKQAAREKLGWKSDRKIIFTSRRLVHRVGIDKLLTALAEIKPRVPDFWLAIAGRGHIQAALQQQALDLGLDEQVKFLGFLPDELLPVAYQAADFTIMPSQSFEGFGLAVVESLSCGTPVVCTPVGGMPEILQQFSPELITDSITVGAIADKLEQILLGKISLPSTQECRDYAVNNYDWDKIAMDIREIILAK
>NZ_CP011382.1|WP_035153764.1|3172487_3173639_-|glycosyltransferase-family-4-protein
MKILFLDQSGKPGGAELCLIDIAKPYRETSLVGLFADGEFKNILQENQIPVQILTQKSLQVRKESSLFQALGSVGQLIPLVQKVAQLAKNYDCIYANTQKALVVGALGSFLSDRPLIYHLHDILSPEHFSNTNRRVAVTLANRFASLVIANSQASKTAFIQAGGRSEITEIVYNGFHPQTYEIPMSTAQEMREKLGLSGKYIVGHFSRLAPWKGQHILLEALSKCPEDVAVILVGDALFGEQDYVQKLHQQVADLGLTNRVKFLGFRSDIPQLMAACDVVTHTSTAPEPFGRVIVEAMLCGKPIIAAKAGGAMELVENEVNGFLVEPGKSEDLALVISDCFHHREKTGKIAENARLSASQRFDVVNINQQIAQLLLRVLPIKP
>NZ_CP011382.1|WP_035153762.1|3172058_3172322_+|hypothetical-protein
MIKHYILSLNPTAKHEWDRCILREPLTAKRPDIAKLVAEVVGTDAGNYLVSVNIEVKVLEQTVATQTEQLTLNFAEVNEKPHLREVA
>NZ_CP011382.1|WP_035153761.1|3170165_3171443_-|adenosylhomocysteinase
MTATSPRLKHEVKDLALAPLGRQRIEWAGREMPVLKQIRDRFEQEKPFAGIKISACCHVTTETAHLAIALKAGGADAILIASNPLSTQDDVAASLVVDYGIPVFAIKGEDEATYNRHVQIALDHRPNIIVDDGCDVVATLIQQRPHQIADLIGTTEETTTGIVRLQAMLKDGVLTFPAMNINDADTKHFFDNRYGTGQSTLDGVIRATNVLLAGKTVVVAGYGWCGKGTAMRASGMGASVIVTEIDPVKGIEAVMDGFRVMPMAEAAPLGDLFITVTGNKHVIRSEHFDVMKDGAMVCNSGHFDIEIDLKSLASKAKEIKDVRPFTQEYKLNNGKSVVVLGEGRLVNLAAAEGHPSAVMDMSFANQAMGAEYLVKNKGKLQPGIHAIPADVDKEIARLKLQAMGITVDTLTQDQIDYSNSWTSGT
>NZ_CP011382.1|WP_035153783.1|3182176_3183820_-|trypsin-like-serine-protease
MNFSPRYSALALLGVGFALVQIQLATAQIPAEVNTIAQQVTVRIDGANTGSGVIIQRQGNTYTVLTNWHVVAISGGYTIRTTDGRTHRITAIKRLGKIDLAEVQFTSSENYRPVNMATSRVSAGTTVYISGWADPDAVSTAREYIILPQTITRVAQNPKNEYALVFSNPTKPGMSGGPVLDAQGRLVGIHGQGKEDVRTGATDFLGIPIDTYRKIAAAPQVKPVTPTQAKPVTAQPEKTPPPDLSQPVKSPSPWTLASTLTGHSNWVSSVAFSPDGQTLASGSLDNTIKIWNPKTGKLITTLTGHSNWVSSVAFSPDGQTLASGSGDKTIKIWNPKTGKLITTLTGHSDSVYSVAFSPDGQTLATGSHDKTIKIWDPRTGELITTLKGGHYGWVSSVAFSPDGQTLASVSEDTNIKIWNPRTGKLITTLKGGHYQLVTSVVFSPDGQTLATGSRDNTIKIWNPKTGRLITTLTGHSGSVWSVAFIRDGQTLATGSGDYTIKLWNPRTGKLITTLTGHSNGVNSVAFSPDGQTLASGSDDKTIKIWRY
>NZ_CP011382.1|WP_035153785.1|3183823_3184405_-|hypothetical-protein
MQLKLGQILSAAMTVAISSVVIVANVSNQPSYAGNQKFICRTENGVSVTKVYTPRRGYETFIRWVVKDFKKFPPSQRCKMVTARLQRYYDNGKVYITERNELNGYPVLCIANTKGSDCAKDNILVTLKPGTDTGKILRQIIAFRDRATGEPINLSGSNYATYVNGDVYIDIKQLVDADTSQSKPQLTPVEPRF
>NZ_CP011382.1|WP_035153786.1|3184632_3186486_+|threonine--tRNA-ligase
MVSSVTQSPQDVKDTQEYERIRHTCAHVLAMAVQKLYPGTKVAIGPVTETGFYYDFDSPVNFTPEDLEKISVQMRRIIKANLPVIREEVERTEIRQEIEKNHEIYKLEILARIPEGETITRYFIGSPDILQGENSEPSLFANTSLQPSENNTWWDLCAGPHINSTGEINPQAFALLNVAGAYWLGDENKPMLQRIYGTAWHTKEELELYLKQREEALRRDHRKIGQELNLFSIQDDAGGGLVFWHPKGSLIRHIIENYWKNSHLEAGYQLLYTPHLANLDLWKTSGHYDFYRENMFESMDIENQAYQIKPMNCPFHVLTYKNQLHSYRELPIRVCELGTVYRYERSGALHGLMRVRGFTQDDAHIFCLPEQIAPEILEVLNLTEKILSDFGFKNYEVNLSTRPDKFVGKDEVWKLATIALQDALQAKGWDYVIDEGGGAFYGPKIDIKIEDAIGRRWQCSTIQVDFNLPERFDMEYVDSNSSRQRPIMIHRAIFGSLERFFGILIENYAGDFPLWLAPVQVKLLPVSDDVRNYAEFVADNLKKSGIRVEIDNTGERLGKQIRAAELEKFPVVGVIGKKEVESQSLSIRTRKSGDLGILTIPELKQKLQLTIDSKSVI
>NZ_CP011382.1|WP_035153788.1|3186499_3186757_+|hypothetical-protein
MSFSFRNQSTKASLENTQQVKELIYRLWNLDADTVISLSQLNCHKSDCPPVETVITVMTNPIQSYKIHKAISDINEEDILCLNNI
>NZ_CP011382.1|WP_035153791.1|3187081_3188140_+|GTP-binding-protein
MQASILPNLNHDVEMPKRGMPVSIITGFLGSGKTTLLNQILKNKQDLKVAVLVNEFGDINIDSQLLVSVDQDMLELSNGCICCTINDSLVDAVYRILEREERIDYLVIETTGVADPLPIILTFLGIELRDLTNLDSILTVVDAESFNREHFNSESALKQITYGDIILLNKTDLVSLDKIRELQSFINEVKVGARILRTSHGEVPLPLILGVGLTPKDKYVYEDEHHHHEHDHHDHHHHEHDHHDHHHHEHHNHHSDHLQNDGFISVSFQSDRPFDVHKFEHFLTEEMPQEVFRAKGILWFDDSQLRHIFQLSGPRYNLHADEWQTAPKNQLVFIGRNLDAGKIHSQLYNCLL
>NZ_CP011382.1|WP_035153793.1|3188391_3189042_+|GTP-cyclohydrolase-I-FolE
MTLSIRPELTSADQVLSNVPNKVTAKVTEAEMTQAVRTLLIGLGEDPDREGLIDTPKRVVKALQFLTKGYNESLDELLNGAVFTEDANEMVLVRDIDIFSSCEHHILPIIGRVHVAYIPNGKVIGLSKIARICEMYARRLQVQERLTMQIADALQGLLKPQGVAVVLEATHMCMVMRGVQKPGSWTVTSAMRGVFAEDVRTRQEFMNLVRHNANFH
>NZ_CP011382.1|WP_035153795.1|3189421_3190189_-|hypothetical-protein
MILPKNPCIPVITSRIVLFLLLVTSSSGCNQKSQQEIQLEIKAVEFQGSGGKYNITGSSNLPNSSQITVAAVRYLQPKAAPKQELTESNIDTNRSILARQIVKVEQGKWEANLNLWEEVSPQGNYQEPWQKNPMQSQFTPEGDVTFIATFDPTSQWQRLDQQTGKIPEPETQKLEGKSLRFTSEGEKYVQASQIISVSLPTGKTTPPTKGAEDINDGWGNRYQLRSQPLTATNPVPPVRKSRQNTAPLSPSEFMR
>NZ_CP011382.1|WP_035153797.1|3190479_3192327_+|hypothetical-protein
MKPRILERHKYTFPTRFHNLNLLLCVTSVSCLCLLAESHFSLVTANPPPNLQLGLGNLPVPASPTPGVRTQPRGNVPPPPGEVTPGMAVAPILNPLSKTTQQSPGDAIKELENSLIQQQSRNPKGNRQKKPVAQNTLRFVPVKLPTVTAAEDTSDTGLRLLGVTNTPSNLETTNSPVTPTFNQYLYSQGKPVQVLPNTTPTQEFTAPSSMAPLPPLPGTTTQSEFSSNSTPTFNQFLSSQNSPTFSQPVVPNTSNYRTVPTSVPSSTAIKQPGVVQQRPVINSTALKEPSLRVQGVYVTQGEDTSARARLAGIYPLTPQLLLGATLDLTSEGTSFDDSRREGLNINELYLATSVGGLPNLRFAVGQLDLTSYFDRNSFAKDGASQFFNPVFQTNPALAVAGISSRTGFLLNWSVNDNIEAKGAVFSSSDKLSDFSLDGFAGEIGVRFGNAIIRGTYATNRDAGIRDSFAESFGIARNAERTVFGTQKDDREEAYGVNAEVFIPNLKLGLFGRYGRYENRDLGEGADTYVVGASFLDLFTADDKLGLAYGRGLSNDRLRSQRKDDVPDVLEMFYDFPLVSNLRLGFTVQGRDSFEETVFGIRVKTEFDVTPRGRNR
>NZ_CP011382.1|WP_035153799.1|3192323_3194672_+|tetratricopeptide-repeat-protein
MIQKRKGINGKGVISLSLLPFYFLVMTAITSVSPLLSLTVVQAQTSSATVQKGFNLLKKGWVNDAIATFQQALKRQPQSLQAKLGLAIAYNRAGRIPEAWNAYQQVLAQDPNNQSALKIVGIMGTYRPEWNRRGINALTTLLQLNPSDTQARGYRALLYSYQGQFSEAIADYQIALNNNPTPDIIIGAAQAYSYGGDYSRALELFNRYRTTGKSINGFAAVAYATSLRQTGNIPGAIQVLEAQLQNSTSLDSVAIETRSELAKAYLANNQQAQALAILDPLRGRSEAILPLARSLNEIRQRNQNPTLAQEVANLYRQVLNNNPNPSPNLLREIADVFTGLPGGEQTALQLYRQAAIQQPNDQSLQIRQLAMENKLGMISKTELRQRLATILQTLPNDGVKLQQIAVAVADIDNPDPELLTVYQSLLHSKLNNGGIRVPFLYFRLAQIYAQKNDLVGARQALAAYTSTPEGKRSLIPQLMAAEIERREGSLEASAKRYQAVLNTQPNSEITDAALRGLAGVRLQQRRYDDALAVYDQLLSRQPSSLITQLGRTSVALQANRIVPGEAEAVLNNWLATQPITNTPPELFSLVGVLPATTQREPLYNYLAQVDPSYIPVQKRLVEAIALRSPAQAKITAKQIIANNPNSYQLQAEVARAAGDLDLASKTYETVLSQQPDNVDALAALGGIRFEQQRFTEAQQIYSRVLEQKPEDRDSRRALADLTAIDDQPLAALAQLEQLQIEQGSQGGTDSEVSRRMQEIQEDFLQRRGFQPPWEDYQRRQKK
>NZ_CP011382.1|WP_035153801.1|3195059_3196316_+|glycosyl-hydrolase
MPCLSRVAVIVSLLGLSACYSSYSLSKSSQPDERANTPVKSVSESTAIFLAALPESTANRQLLAESWDSYRRRFIQSDGRVIDYEASDRSTSEGQAYAMLRAVLINDPETFELTLKWAENNLQRQANGKRTDSLWAWKWGRREDNTWGTIDNNFASDGDIDAITSLIFAARRWNRPEYLELAKTKLEDLWNLSTAPGKEGKHYLLPGPKEAFLPNPNTLYLNPSYLAPYAFRIFAQVDRKHDWLSLVETSYEILDKSTPLSQASLPSDWVALDTESGKYTNLPASKNLQTLYSFDAYRVWWRVSLDAVWFDAPQAKSYLQKSTQYLQKLWQQEKRLPARIDLQGKSLVDYEATSQYAMIYTAWSLIEPQLADEILQQKILPQYQQGIWGDRSAYYTQNLVWLGLLPPQAIPQYLLQTP

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Crispr_ID: NZ_CP011382_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_8

3262673-3262792

Orphan

Consensus_repeat	Method
CCCCGTAAATCTGCGCCACTCAGATCGGCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_8

>merge|NZ_CP011382|8|3262673-3262792|CRISPRCasFinder
CCCCGTAAATCTGCGCCACTCAGATCGGCTCGGTATAAATAAGCTGCCTGGAAGTTGGCATCCCGGAAAATTCCTTGACTGAGATCTGCTCCCCGTAAATCTGCGCCACTCAGATCGGCT

>NZ_CP011382|8|7|3262673-3262792|CRISPRCasFinder
CCCCGTAAATCTGCGCCACTCAGATCGGCT	CGGTATAAATAAGCTGCCTGGAAGTTGGCATCCCGGAAAATTCCTTGACTGAGATCTGCT
CCCCGTAAATCTGCGCCACTCAGATCGGCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035153872.1\|3261347_3261566_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	unknown	unknown	gnl\|CDD\|224514
NZ_CP011382.1\|WP_035153890.1\|3268672_3269488_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_CP011382.1\|WP_035153886.1\|3267052_3267541_+\|phycocyanin-subunit-alpha	unknown	unknown	gnl\|CDD\|271303
NZ_CP011382.1\|WP_035153892.1\|3270689_3271208_+\|phycocyanin-subunit-beta	unknown	unknown	gnl\|CDD\|271301
NZ_CP011382.1\|WP_035153869.1\|3257601_3259515_+\|Na+/H+-antiporter	unknown	unknown	gnl\|CDD\|223104
NZ_CP011382.1\|WP_035159031.1\|3261126_3261351_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	unknown	unknown	gnl\|CDD\|377942
NZ_CP011382.1\|WP_035153883.1\|3266434_3266953_+\|phycocyanin-subunit-beta	unknown	unknown	gnl\|CDD\|271301
NZ_CP011382.1\|WP_035153878.1\|3263741_3264122_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035153871.1\|3260291_3260951_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_CP011382.1\|WP_035153867.1\|3255222_3256836_+\|DNA-phosphorothioation-system-sulfurtransferase-DndC	unknown	unknown	gnl\|CDD\|235877
NZ_CP011382.1\|WP_035153877.1\|3263071_3263680_+\|phycobiliprotein-lyase	unknown	unknown	gnl\|CDD\|312763
NZ_CP011382.1\|WP_035153875.1\|3261949_3262156_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035153865.1\|3252168_3253344_-\|DGQHR-domain-containing-protein	unknown	unknown	gnl\|CDD\|379453
NZ_CP011382.1\|WP_035153882.1\|3265098_3265854_+\|phycoerythrobilin:ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|139427
NZ_CP011382.1\|WP_035153879.1\|3264353_3265091_+\|15,16-dihydrobiliverdin:ferredoxin-oxidoreductase	unknown	unknown	gnl\|CDD\|237315
NZ_CP011382.1\|WP_035153866.1\|3253456_3255055_-\|DGQHR-domain-containing-protein	unknown	unknown	gnl\|CDD\|319271
NZ_CP011382.1\|WP_035153888.1\|3267795_3268623_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	gnl\|CDD\|224331
NZ_CP011382.1\|WP_046815008.1\|3259497_3260121_-\|phycobilisome-protein	unknown	unknown	gnl\|CDD\|381268
NZ_CP011382.1\|WP_035153863.1\|3251467_3251935_+\|DNA-phosphorothioation-associated-protein-4	unknown	unknown	gnl\|CDD\|274953
NZ_CP011382.1\|WP_035159033.1\|3269530_3269917_+\|nuclear-transport-factor-2-family-protein	unknown	unknown	gnl\|CDD\|378915

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035153872.1\|3261347_3261566_+\|type-II-toxin-antitoxin-system-HicB-family-antitoxin	gnl\|CDD\|224514	COG1598, COG1598, Predicted nuclease of the RNAse H fold, HicB family [General function prediction only].	1.47716e-09
NZ_CP011382.1\|WP_035153890.1\|3268672_3269488_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	6.3823e-08
NZ_CP011382.1\|WP_035153886.1\|3267052_3267541_+\|phycocyanin-subunit-alpha	gnl\|CDD\|271303	cd14770, PC-PEC_alpha, Alpha subunits of phycoerythrin and phycoerythrocyanin; phycobilisome rod components. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	1.22531e-102
NZ_CP011382.1\|WP_035153892.1\|3270689_3271208_+\|phycocyanin-subunit-beta	gnl\|CDD\|271301	cd14768, PC_PEC_beta, Beta subunits of phycoerythrin and phycoerythrocyanin; phycobilisome rod components. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	8.7233e-105
NZ_CP011382.1\|WP_035153869.1\|3257601_3259515_+\|Na+/H+-antiporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	1.15512e-74
NZ_CP011382.1\|WP_035159031.1\|3261126_3261351_+\|type-II-toxin-antitoxin-system-HicA-family-toxin	gnl\|CDD\|377942	pfam07927, HicA_toxin, HicA toxin of bacterial toxin-antitoxin,. HicA_toxin is a bacterial family of toxins that act as mRNA interferases. The antitoxin that neutralizes this is family HicB, pfam15919.	3.86802e-10
NZ_CP011382.1\|WP_035153883.1\|3266434_3266953_+\|phycocyanin-subunit-beta	gnl\|CDD\|271301	cd14768, PC_PEC_beta, Beta subunits of phycoerythrin and phycoerythrocyanin; phycobilisome rod components. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC).	8.45339e-108
NZ_CP011382.1\|WP_035153888.1\|3267795_3268623_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	5.374e-27
NZ_CP011382.1\|WP_035153871.1\|3260291_3260951_+\|HEAT-repeat-domain-containing-protein	gnl\|CDD\|224331	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion].	3.22336e-10
NZ_CP011382.1\|WP_035153879.1\|3264353_3265091_+\|15,16-dihydrobiliverdin:ferredoxin-oxidoreductase	gnl\|CDD\|237315	PRK13247, PRK13247, 15,16-dihydrobiliverdin:ferredoxin oxidoreductase.	3.01317e-136
NZ_CP011382.1\|WP_035153877.1\|3263071_3263680_+\|phycobiliprotein-lyase	gnl\|CDD\|312763	pfam09367, CpeS, CpeS-like protein. This family, that includes CpeS proteins, is functionally uncharacterized.	9.60904e-77
NZ_CP011382.1\|WP_035153865.1\|3252168_3253344_-\|DGQHR-domain-containing-protein	gnl\|CDD\|379453	pfam14072, DndB, DNA-sulfur modification-associated. This is family of bacterial proteins likely to be necessary for binding to DNA and recognising the modification sites. Members are found in bacteria, archaea and on viral plasmids, and are typically between 354 and 474 amino acids in length. There is a conserved DGQHR sequence motif.	6.61753e-98
NZ_CP011382.1\|WP_035153882.1\|3265098_3265854_+\|phycoerythrobilin:ferredoxin-oxidoreductase	gnl\|CDD\|139427	PRK13250, PRK13250, phycoerythrobilin:ferredoxin oxidoreductase; Provisional.	1.6814e-158
NZ_CP011382.1\|WP_035153867.1\|3255222_3256836_+\|DNA-phosphorothioation-system-sulfurtransferase-DndC	gnl\|CDD\|235877	PRK06850, PRK06850, hypothetical protein; Provisional.	0
NZ_CP011382.1\|WP_035153866.1\|3253456_3255055_-\|DGQHR-domain-containing-protein	gnl\|CDD\|319271	cd16414, dndB_like, DNA-sulfur modification-associated domain. Family of proteins related to dndB. dndB acts in the regulation of DNA modifications, including DNA phosphorothioation. Both have a conserved DGQHR sequence motif. These proteins show similarity to the N-terminal domain of ParB, a DNA-binding component of the prokaryotic parABS partitioning system, and other members of the ParB/Srx superfamily.	2.61482e-43
NZ_CP011382.1\|WP_046815008.1\|3259497_3260121_-\|phycobilisome-protein	gnl\|CDD\|381268	cd12130, Apl, Allophycocyanin-like globins. phycobilisomes (PBSs) are the main light-harvesting complex in cyanobacteria and red algae. In general, they consist of a central core and surrounding rods and function to harvest and channel light energy toward the photosynthetic reaction centers within the membrane. They are comprised of phycobiliproteins/chromophorylated proteins (PBPs) maintained together by linker polypeptides. PBPs have different numbers of chromophores, and the basic monomer component (alpha/beta heterodimers) can further oligomerize to ring-shaped trimers (heterohexamers) and hexamers (heterododecamers). Stacked PBP hexamers form both the core and the rods of the PBS; the core is mainly made up by allophycocyanin (APC) while the rods can be composed of the PBPs phycoerythrin (PE), phycocyanin (PC) and phycoerythrocyanin (PEC). This subfamily contains allophycocyanin-like proteins (Apls), which have conserved the residues critical for chromophore interactions, but may not maintain the proper alpha-beta subunit interactions and tertiary structure of phycobiliproteins. Indeed AplA isolated from Fremyella diplosiphon was not detected in phycobilisomes. As the genes encoding Apls cluster with light-responsive regulatory components, Apls may have photoresponsive regulatory role(s).	1.59637e-87
NZ_CP011382.1\|WP_035153863.1\|3251467_3251935_+\|DNA-phosphorothioation-associated-protein-4	gnl\|CDD\|274953	TIGR04062, hypothetical_protein_CY0110_29519, dnd system-associated protein 4. A DNA sulfur modification system, dnd (degradation during electrophoresis), is sparsely and sporadically distributed among the bacteria. Members of this protein fam ily are strictly limited to species with the dnd operon, and are found close to the dnd operon on the chromosomes of species such as Nostoc sp. PCC 7120, Geobacter uraniireducens Rf4, and Roseobacter denitrificans OCh 114. [DNA metabolism, Restriction/modification].	3.30677e-58
NZ_CP011382.1\|WP_035159033.1\|3269530_3269917_+\|nuclear-transport-factor-2-family-protein	gnl\|CDD\|378915	pfam12680, SnoaL_2, SnoaL-like domain. This family contains a large number of proteins that share the SnoaL fold.	4.7303e-05

>NZ_CP011382.1|WP_035153875.1|3261949_3262156_+|hypothetical-protein
MTEIPIGGEMLWKLEGDDRVLYLRHNASEPWLPYEDFPQYVLPDPQGFSKGIATFLALLKQGWTATKS
>NZ_CP011382.1|WP_035153872.1|3261347_3261566_+|type-II-toxin-antitoxin-system-HicB-family-antitoxin
MSRYSMIVQWSDEDQLFLVTIPEFADRVIMPCTHGKTREEAIHNGEEVIEMYLEAWQSEGESIPTPSTLQIA
>NZ_CP011382.1|WP_035159031.1|3261126_3261351_+|type-II-toxin-antitoxin-system-HicA-family-toxin
MPRKIREFKAQIEREGFIYLPKRGKGSHERWRHPLLGKTLTIPGKNSDDVPIYLEKQLEKLLTALEELREEEDS
>NZ_CP011382.1|WP_035153871.1|3260291_3260951_+|HEAT-repeat-domain-containing-protein
MELHEIEAELHNSDFQYRLKAVSALQNYPMDVAVPLLTQHIKDPEFLVRSFVARELGRQKNSDSFAALLQIIKFDNTPNVRAEASNSLSLFGKVSASHLVQTFVRDDHWLVRRSILAALVEMDCPEEIWEVCLLGIAAEDTAVQEASVDALGWLANSRQSEIALSQLLTLKDSPFEYIRVRVAYALKNFPTPAAKEALAQLRQDSDHRVVGAAMEDLLL
>NZ_CP011382.1|WP_046815008.1|3259497_3260121_-|phycobilisome-protein
MVKDLRILNRERSDVTKTVLSETVRELIQKARIVSFTTWQNTHPPESIQLFQAADDGGRYLSDEDLQQIQQLVPSTATVIPLTQELRDRVTEIVDEARNQVLEAFPNITQPGGGLYPAMRADACWRDFWHFLRCITYGIAGQRTDYTSSEGLHYMQLLYQELQVPLDAMVVGLEGIKTASLKRVEVGQQAQIAPYFDHLIEQLKLFK
>NZ_CP011382.1|WP_035153869.1|3257601_3259515_+|Na+/H+-antiporter
MEASFEITLQMAIAVFAGILAQVLAAYLRVPSIVFLLMFGILLGADGIGLLHPQVLGTGLEVIVALATAIILFEGGLNLELRDLGKVSTSLQLLVTLGTMVTLLGGSMAAHWLGEFPWAIALLYASLVVVTGPTVISPLLKQIKVDRQVATLLEGEGVLIDPVGAILAVVVLNTILNDHAAPMAAISSVLTRLGVGAVVGGGGGWLMSWICKRATVLSFELKNLVVLAGLWGLFVLAQMLRSESGLMATVVAGVVFGAASVPEERLLRRFKGQLTILSISVLFILLAADLSIASLFALGWGSVLTVLALMFIVRPINILCCTWNSDLNWRQKLFLCWVAPRGIVSASVASLFAIVLTQRGINGGEAIKALVFLTIIMTVVCQGLTAGVIAQWLQITSQEATGAVIVGCNPLSLLLARLLQERGENVVMIDTDSQASQKAEAENLRVITSSALDENVLEEAGLGGMGTFLAMTTNGEVNYVLAQRAAEEFNPPRVLAVFPRDPQANNATTKMKVSQAFLGELQIKTWNQYLNDEQVKLGMTTLKEPGFSLQKIQLQALIKTGELVPIFIEREEKLQVMPADEVWQPGDRIIYLLHDPRPNLLKRLSGSSQATRLSLEKLPEVEELPIAKSSDISLKQL
>NZ_CP011382.1|WP_035153867.1|3255222_3256836_+|DNA-phosphorothioation-system-sulfurtransferase-DndC
MTTVQKSDKKNQNQRTVAEFVEDVELLTQEIQDLYCLDAIPWVIGVSWGKDSSAILQLIWNAISTLPKEKLHKTIHVITTDTLVENPIISAWVRKSMQQLNLAAQEKKIPIEPHLLQPVIVDTFWVNLIGRGYPAPRNQFRWCTQRLKINPANYFIREMVRANGETILVLGTRKAESSKRAATMQKHQVGRVRDRLSPNSSLPNSLIYTPIEDWRNDEVWLYLMQWENPWGGNNKDLFNIYRGATADNECPLVVDTSTPSCGDSRFGCWVCTLVSKDKSMEAMIQNDEEKEWMKPLLDIRNELDVRNDYDKRDFRRIWGEVQLFERNKDGETSVEPIPGPYTKYWREYWLKSVLQAQTTMRQTAPENMRDITLISLAELSEIRRIWLEDKHEFDDSLPRIYQEVTGEEFQDPRPGADYSLLGNDEWAVLEEICAGDAMHLELMAKLLDTERQFRKRSRRVGIYEALEGCFKTSSRSQEEAIKNAHFKRDLKEAVTKGDIDKVRQLTLGDVVNPPQEDTQNNKSQSWAGKKFKKQKDN
>NZ_CP011382.1|WP_035153866.1|3253456_3255055_-|DGQHR-domain-containing-protein
MESISADNITSTTTQYSHLDDSEEERIKSLLNQYLDDNQKILVQKTNMGGTEAYVSSVTLEWFANQVKFASSLPLLHRKYNSQSGNIDIDAETIDEIQQRPLDWSRQISLVQYLATRKHHKFPPVLVVVSPSWVDNPKAKEWDKKGRAKKSAIAFTPLDIREKFGLINLQTDLTIYALDGQHRLMGVQGLIELLKTGEIPRYRKDKTTYETNLKLEDLIEKFSIKLTDIQNLPQETIGIEFISAVVAGETREEARKRVRSIFVHVNLMATPLSKGQLAQLNEDNGFAIIARKIAVTHPLLKQRDKRNPRVNWNSATIATKSTVLTTLQALTEMSERYLGHKFPHWKAIDKSLVPLRPDDEELSEGIDKFNQLFDCLASLPSYQIIEHADTPSLRRFSFEKDEGEGNMLFRPVGQIALAQALGILVFQKGFTLEDIFKKLRIFDQKGGFTAIEFPQSLWYGILYDPNKRRIQVSGKELAARLLVYILGGIQEQMERAELRKDLAKCRTFENRTISFEGKFVEPKKVGLPEILS
>NZ_CP011382.1|WP_035153865.1|3252168_3253344_-|DGQHR-domain-containing-protein
MNSIDNITPEEQTQFRTFIEPFFSKYYRERCYPGLILKQGQRTMLQINVPARDFSGLLQTKPSTNNDPDSGKNRPEVKGHAEEIKDYIIENSQKNKPWIVGTLTANVNPEDIKIIEFGRGICLVVINRGVKLDITDGQHRKRAIHELIESNNGYLIAEDDFPITLVLEGDHRQCQKDFRDMAQTKALDKSLILSFGEFSGCVGITKELINRVPMFKDKTEKIKSSPTTKQKLIYTTSYISKLVSCSFANSINDPLKGIDVYQASDALVVCLSNFFSRCSNTEYVYDTPTEELTIEDVAEFKEDCLLGTSVGLEVLGRLLYHTYSSAENCFDEAKIAQLIDIDWSRENQLWKDNIVRIETNPKNIDKPYKISASVGAVADAVKAVKITLGWF
>NZ_CP011382.1|WP_035153863.1|3251467_3251935_+|DNA-phosphorothioation-associated-protein-4
MADSGRIRIAKDKAELVKELASDDTDKGVFQTFAEVVVFAAALGVKHQRQVPLREISKREPAPIRLDIFASNGYDWLIKVLGVNYTGNIQILAPDEDQNQAYQIFEEYANGGLEILQGELHGAVDYSERILLLLNYERDNSTEENEEFDLSRFLT
>NZ_CP011382.1|WP_035153877.1|3263071_3263680_+|phycobiliprotein-lyase
MPFVPPITMMDFFRKSQGVWFTQRTVHHFNTVADQSGESKLYVNVITQDDPRVQSICEQQNIAAARARGGASFMWQAHDDDREPNPEQAAVLIDVPDDESGRSGKLLRNQGYVEKIPVASRYWFGQDGILTIDTEYESNQGQERCWFMTDDFRVRVSTVRTMNGVYLMTYCSERRCLTEANLAEMVQHNLSRDVMGESLISQ
>NZ_CP011382.1|WP_035153878.1|3263741_3264122_+|hypothetical-protein
MTEPDKSALKARNQLLGMFVALCILDITLVIIVWDMWAIGRILLTIVVMYFVFQGKKWAKWLLMGICSFLVVALVAMVILLRTKLSTMVIVGSLIMAVLSAIIAIYLASSQDLRHYLAWKRQNNPQ
>NZ_CP011382.1|WP_035153879.1|3264353_3265091_+|15,16-dihydrobiliverdin:ferredoxin-oxidoreductase
MYKRFLEHLEQSLFQRFTLQSRPIPPGLEYQVSDRGRNPATIRSWCYQCPEYRKIRYTYIDAGASAQILNSVIYPSHYYELPLLGIDFLSFGQVKNLIVMDFQPLFQDEAYLKKYIYPLQTLHDKYPDLVQDLEMKFYDANQYFSKYLLFAKTDAETVKTRVFAAFKDYLDLYWQMLAQAQPLTDQSDIQRIVKAQKDYDQYSADRDPASGLFSSYFGHEWSERFLHEFLFEDAVPLATSGKKVN
>NZ_CP011382.1|WP_035153882.1|3265098_3265854_+|phycoerythrobilin:ferredoxin-oxidoreductase
MTLYQPFLDYAIALLHARLDLQAYPIPPGFESKQATVGKGKHQEEVLTTSYAYQSPKLRQIRAAHVQGGSSLQVLNFVIFPHLNYDLPFFGADLVTLPGGHLIALDMQPLFRDDSEYQRKYTQPILPIFEQYQQHLPWGGDFPAEAQPFFSPAFLWTRPQETEVVETHVFAAFQAYLQAYLDFVDHAEPITDSQQKTDIQQAQLRYLRYRAEKDPARGMFNRFYGTEWTEEYIHGFLFDLERQLATTASHF
>NZ_CP011382.1|WP_035153883.1|3266434_3266953_+|phycocyanin-subunit-beta
MFDAFAKVVSQADARGEYITGSQLDALSAMVADGNKRMDVVNRITSNSSTIVANAARSLFAEQPQLIAPGGNAYTSRRMAACLRDMEIILRYITYAIFAGDASILDDRCLNGLKETYLALGTPGSSVAVGVQKMKDAAVAIAGDTNGVTRGDCSSLMSEVASYFDRAASAVG
>NZ_CP011382.1|WP_035153886.1|3267052_3267541_+|phycocyanin-subunit-alpha
MKTPLTEAVAAADSQGRFLSSTEIQTAFGRFRQAQASLTAAKALSEKASSLASGAANAVYSKYPYTTSTSGANFASTQTGKDKCVRDIGYYLRMVTYCLVVGGTGPMDDYLISGIAEINRTFDLSPSWYVEALKYIKANHGLSGDPAVEANSYIDYAINALS
>NZ_CP011382.1|WP_035153888.1|3267795_3268623_+|HEAT-repeat-domain-containing-protein
MENEVSILDDNQLTVEQAIANLQGEDLGLRVYAAWWLGRFRVDVPEAIDVLITALTDEDDRTNAGGYPLRRNAARALGKLGEKRAVPALILALECADFYVREAAAQSLEMLGDTSCIPRLIDLLNNQVPGTLPAPEPPQLVQPFDAIIEALGTLGAVEAMPLIESFLDHFIPRIQYAAARAMYQLTTDPHVASQYGDRLVKALGNEDLQLRRAVLSDLGAIGYLPAAGAIAETLAENSLKLISLKGLLEKQLQTTAPGNLPPEVIKVMTLMDELL
>NZ_CP011382.1|WP_035153890.1|3268672_3269488_+|HEAT-repeat-domain-containing-protein
MSDQLSSLIRAVEEADSSQLLQEAVKNLSEANLEGAIPTLIAALSYNNPGAAVASVEGLIRIGEPAVPALLEQLDLHNYTARAWAIRALAGIGDPRGLVTLLGAATADFALSVRRAAARGLGMMKWHWFPEELLEIAQEEALEALLFVAQQDDEWVVRYSAVVGLQYLAEAVAVNYPQWRSQIQSQLTDMAVNDHSLAVRARVWMAQQYLETETATPVDTTPSPLSSMDWQRIMDGLYGRKGEERLVLAEGDPRKYRELVTAIAENTEAEV
>NZ_CP011382.1|WP_035159033.1|3269530_3269917_+|nuclear-transport-factor-2-family-protein
MEGIKIFIARQAFDFLAQGWATGNFQPFIEMLSDDVIFWLPVGKQLDKSFSYADKQQIIARFEKRLEAGDRLTFSPPDDITSNETSVTFEFEAQGTINHQPVTRRNAISFDIREDKIVGIREYFGDID
>NZ_CP011382.1|WP_035153892.1|3270689_3271208_+|phycocyanin-subunit-beta
MLDAFTKVVSQADTRGTYVSDAEIDALKDMVAAGAKRMDVVNRITGNGSTIVANAARALFAEQPQLIAPGGNAYTNRRMAACLRDMEIILRYVTYAVFTGDASVLDDRCLNGLRETYQALGVPGGSVAAGVNKMKEAAIAIANDPSGVTRGDCSSLMAELGSYFDRAASAVG

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Crispr_ID: NZ_CP011382_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_9

3511223-3511356

Orphan

Consensus_repeat	Method
TTAGAGAAAATTCCTGTACCAGAGGAGGGGGAAGTACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_9

>merge|NZ_CP011382|9|3511223-3511356|CRISPRCasFinder
TTAGAGAAAATTCCTGTACCAGAGGAGGGGGAAGTACCAAAAGTTGAACCCCAGGAATCAGAAACACCGAAAACACCCTCACCCCAACCTCAGGAGTTAGAGAAAATTCCTGTACCAGAGGAAGGGGAAGTACC

>NZ_CP011382|9|8|3511223-3511356|CRISPRCasFinder
TTAGAGAAAATTCCTGTACCAGAGGAGGGGGAAGTACC	AAAAGTTGAACCCCAGGAATCAGAAACACCGAAAACACCCTCACCCCAACCTCAGGAG
TTAGAGAAAATTCCTGTACCAGAGGAAGGGGAAGTACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_082127332.1\|3496864_3500182_-\|DNA-directed-RNA-polymerase-subunit-beta	unknown	unknown	gnl\|CDD\|234749
NZ_CP011382.1\|WP_035154215.1\|3517312_3518665_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP011382.1\|WP_035154220.1\|3523443_3524055_-\|cupin	unknown	unknown	gnl\|CDD\|227840
NZ_CP011382.1\|WP_035154191.1\|3494862_3496740_-\|DNA-directed-RNA-polymerase-subunit-gamma	unknown	unknown	gnl\|CDD\|235055
NZ_CP011382.1\|WP_035154216.1\|3518802_3522072_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|334294
NZ_CP011382.1\|WP_035154197.1\|3500844_3501636_-\|TatD-family-hydrolase	unknown	unknown	gnl\|CDD\|223162
NZ_CP011382.1\|WP_035154206.1\|3507249_3509508_-\|photosystem-I-core-protein-PsaA	unknown	unknown	gnl\|CDD\|176996
NZ_CP011382.1\|WP_035154189.1\|3490700_3494765_-\|DNA-directed-RNA-polymerase-subunit-beta''	unknown	unknown	gnl\|CDD\|235052
NZ_CP011382.1\|WP_035154222.1\|3524344_3524824_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274350
NZ_CP011382.1\|WP_035154218.1\|3522316_3522787_-\|nitrogenase-associated-protein	unknown	unknown	gnl\|CDD\|239331
NZ_CP011382.1\|WP_168163487.1\|3513188_3514310_+\|cell-wall-biogenesis-protein	unknown	unknown	gnl\|CDD\|99740
NZ_CP011382.1\|WP_035154211.1\|3514478_3516053_+\|protein-kinase	unknown	unknown	gnl\|CDD\|270916
NZ_CP011382.1\|WP_035154213.1\|3516102_3516642_-\|phycobiliprotein-lyase	unknown	unknown	gnl\|CDD\|381208
NZ_CP011382.1\|WP_035154201.1\|3503439_3504228_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_144416040.1\|3502352_3502541_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154199.1\|3501716_3502016_-\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|214366
NZ_CP011382.1\|WP_035154203.1\|3504897_3507123_-\|photosystem-I-core-protein-PsaB	unknown	unknown	gnl\|CDD\|237300
NZ_CP011382.1\|WP_035154224.1\|3524861_3525443_-\|heme-copper-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|224758
NZ_CP011382.1\|WP_035159086.1\|3504333_3504795_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP011382.1\|WP_035154208.1\|3511862_3512762_-\|glutaminase	unknown	unknown	gnl\|CDD\|234880

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_082127332.1\|3496864_3500182_-\|DNA-directed-RNA-polymerase-subunit-beta	gnl\|CDD\|234749	PRK00405, rpoB, DNA-directed RNA polymerase subunit beta; Reviewed.	0
NZ_CP011382.1\|WP_035154222.1\|3524344_3524824_-\|hypothetical-protein	gnl\|CDD\|274350	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein. This protein family occurs in strictly within a subset of Gram-negative bacterial species with the proposed PEP-CTERM/exosortase system, analogous to the LPXTG/sortase system common in Gram-positive bacteria. This protein occurs in a species if and only if a transmembrane histidine kinase (TIGR02916) and a DNA-binding response regulator (TIGR02915) also occur. The present of tetratricopeptide repeats (TPR) suggests protein-protein interaction, possibly for the regulation of PEP-CTERM protein expression, since many PEP-CTERM proteins in these genomes are preceded by a proposed DNA binding site for the response regulator.	0.00909296
NZ_CP011382.1\|WP_035154220.1\|3523443_3524055_-\|cupin	gnl\|CDD\|227840	COG5553, COG5553, Predicted metal-dependent enzyme of the double-stranded beta helix superfamily [General function prediction only].	1.83723e-60
NZ_CP011382.1\|WP_035154191.1\|3494862_3496740_-\|DNA-directed-RNA-polymerase-subunit-gamma	gnl\|CDD\|235055	PRK02625, rpoC1, DNA-directed RNA polymerase subunit gamma; Provisional.	0
NZ_CP011382.1\|WP_035154216.1\|3518802_3522072_+\|MMPL-family-transporter	gnl\|CDD\|334294	pfam00873, ACR_tran, AcrB/AcrD/AcrF family. Members of this family are integral membrane proteins. Some are involved in drug resistance. AcrB cooperates with a membrane fusion protein, AcrA, and an outer membrane channel TolC. The structure shows the AcrB forms a homotrimer.	0
NZ_CP011382.1\|WP_035154197.1\|3500844_3501636_-\|TatD-family-hydrolase	gnl\|CDD\|223162	COG0084, TatD, Mg-dependent DNase [DNA replication, recombination, and repair].	4.60218e-114
NZ_CP011382.1\|WP_035154206.1\|3507249_3509508_-\|photosystem-I-core-protein-PsaA	gnl\|CDD\|176996	CHL00056, psaA, photosystem I P700 chlorophyll a apoprotein A1.	0
NZ_CP011382.1\|WP_035154189.1\|3490700_3494765_-\|DNA-directed-RNA-polymerase-subunit-beta''	gnl\|CDD\|235052	PRK02597, rpoC2, DNA-directed RNA polymerase subunit beta'; Provisional.	0
NZ_CP011382.1\|WP_035154218.1\|3522316_3522787_-\|nitrogenase-associated-protein	gnl\|CDD\|239331	cd03033, ArsC_15kD, Arsenate Reductase (ArsC) family, 15kD protein subfamily; composed of proteins of unknown function with similarity to thioredoxin-fold arsenic reductases, ArsC. It is encoded by an ORF present in a gene cluster associated with nitrogen fixation that also encodes dinitrogenase reductase ADP-ribosyltransferase (DRAT) and dinitrogenase reductase activating glycohydrolase (DRAG). ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via glutaredoxin, through a single catalytic cysteine.	2.80301e-71
NZ_CP011382.1\|WP_035154211.1\|3514478_3516053_+\|protein-kinase	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.79065e-81
NZ_CP011382.1\|WP_035154213.1\|3516102_3516642_-\|phycobiliprotein-lyase	gnl\|CDD\|381208	cd19433, lipocalin_CpcS-CpeS, CpcS/CpeS phycobiliprotein lyase family. Phycobilin lyases covalently attach a chromophore to the Cys residue(s) of cyanobacterial phycobiliproteins. They include Synechococcus sp. PCC 7002 phycocyanobilin lyase CpcS which attaches a phycocyanobilin chromophore to C-phycocyanain beta subunit and to allophycocyanin alpha and beta subunits, Synechococcus sp. PCC 7002 phycocyanobilin lyase subunit CpcU which forms a heterodimer with CpcS-I to attach phycocyanobilin to beta-phycocyanin and to allophycocyanin subunits, and Prochlorococcus marinus phycoerythrobilin lyase CpeS which attaches 3Z-phycoerythrobilin to phycoerythrin. This group belongs to the lipocalin/cytosolic fatty-acid binding protein family which have a large beta-barrel ligand-binding cavity. Lipocalins are mainly low molecular weight extracellular proteins that bind principally small hydrophobic ligands, and form covalent or non-covalent complexes with soluble macromolecules, as well as membrane bound-receptors. They participate in processes such as ligand transport, modulation of cell growth and metabolism, regulation of immune response, smell reception, tissue development and animal behavior. Cytosolic fatty-acid binding proteins, also bind hydrophobic ligands in a non-covalent, reversible manner, and have been implicated in intracellular uptake, transport and storage of hydrophobic ligands, regulation of lipid metabolism and sequestration of excess toxic fatty acids, as well as in signaling, gene expression, inflammation, cell growth and proliferation, and cancer development.	2.21248e-46
NZ_CP011382.1\|WP_035154203.1\|3504897_3507123_-\|photosystem-I-core-protein-PsaB	gnl\|CDD\|237300	PRK13199, psaB, photosystem I P700 chlorophyll a apoprotein A2; Provisional.	0
NZ_CP011382.1\|WP_168163487.1\|3513188_3514310_+\|cell-wall-biogenesis-protein	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	4.97518e-21
NZ_CP011382.1\|WP_035154199.1\|3501716_3502016_-\|30S-ribosomal-protein-S20	gnl\|CDD\|214366	CHL00102, rps20, ribosomal protein S20.	2.48254e-27
NZ_CP011382.1\|WP_035154208.1\|3511862_3512762_-\|glutaminase	gnl\|CDD\|234880	PRK00971, PRK00971, glutaminase; Provisional.	1.05927e-126
NZ_CP011382.1\|WP_035154224.1\|3524861_3525443_-\|heme-copper-oxidase-subunit-III	gnl\|CDD\|224758	COG1845, CyoC, Heme/copper-type cytochrome/quinol oxidase, subunit 3 [Energy production and conversion].	7.98079e-59
NZ_CP011382.1\|WP_035159086.1\|3504333_3504795_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.78055e-10
NZ_CP011382.1\|WP_035154215.1\|3517312_3518665_+\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	1.69956e-47

>NZ_CP011382.1|WP_035154206.1|3507249_3509508_-|photosystem-I-core-protein-PsaA
MTISPPEREEKKARIVVDENPVPTSFEKWATPGHFDRSLAKGPKTTTWIWNLHALAHDFDTHTSDLQDISRKIFAAHFGHLAVVTIWLSGMIFHGAKFSNYEAWLTDPLNVKPSAQVVWPIVGQDILNGDVGGGFHGIQITSGLFQVWRGWGITSSFQLYCTAIGGLVLAGLFLFAGWFHYHKKAPKLEWFQNVESMLNHHLQVLLGCGSLGWAGHLIHVSLPTNQLLDSGVALKDIPLPHEFILDSSKMVDLYPGFASGINAFFTLNWGAYSDFLTFKGGLNPVTGGLWMTDIAHHHLAIAVLFIVAGHMYRTNWGIGHSIKEILEGHKGPFTGEGHKGLYENMTTSWHAQLATNLAFLGSLTIIVAHHMYSMPPYPYLATDYATQLCLFTHHMWIGGFLIVGGAAHAAIFMVRDYDPVVNQNNVLDRVIRHRDAIISHLNWVCMFLGFHSFGLYIHNDTMRALGRPQDMFSDTAIQLQPVFAQWVQGIHTMAPGGTAPNALATVSHAFGGGIVAVGGKVAMMPIALGTADFLVHHIHAFTIHVTVLILLKGVLFARSSRLIPDKANLGFRFPCDGPGRGGTCQVSGWDHVFLGLFWMYNSISVVIFHFSWKMQSDVWGTVDAAGNVSHIAGGNFAQSAITINGWLRDFLWAQASQVINSYGSALSAYGLMFLGAHFIWAFSLMFLFSGRGYWQELIESIVWAHNKLKVAPAIQPRALSITQGRAVGVAHYLLGGIATTWAFFHAHILSVG
>NZ_CP011382.1|WP_035154203.1|3504897_3507123_-|photosystem-I-core-protein-PsaB
MATKFPKFSQDLAQDPTTRRIWYAIAMGNDFESHDGMTEENLYQKIFATHFGHLAIIFLWASSLLFHVAWQGNFEQWIKDPLHIRPIAHAIWDPHFGKPAIEAFTQAGASNPVNIAYSGVYHWWYTIGMRTNGDLYMGSIFLLLFASLCLFAGWLHLQPKFRPSLAWFKSAESRLNHHLAGLFGVSSLAWAGHLIHVAIPESRGQHVGWDNFLSTLPHPAGLTPFFTGNWSVYAADPDTASHVFGTSQGSGTAILTFLGGFHPQTESLWLTDMAHHHLAIAVLFIVAGHMYRTNFGIGHSIKEMMDSKTFFGKTVEGPFNMPHQGIYETYNNSLHFQLGWHLACLGVITSLVAQHMYSIPAYAFIARDYTTQAALYTHHQYIAGFLMVGAFAHGAIFLVRDYDPEQNKGNVLARVLEHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQFIQASHGKALYGLNVLLSNPDSIAATAYPNYGNVWLQGWLDAINSGTNSLFLTIGPGDFLVHHAFALAIHTTTLVLVKGALDARGSKLMPDKKDFGYAFPCDGPGRGGTCDISAWDSFYLSMFWMLNTIGWVTFYWHWKHLGIWQGNVAQFNESSTYLMGWFRDYLWANSAQLINGYNPYGMNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPIANLVRWKDKPVALSIVQARVVGLAHFTVGYVLTYAAFVIASTAGKFG
>NZ_CP011382.1|WP_035159086.1|3504333_3504795_-|GNAT-family-N-acetyltransferase
MTKEHNLHIRLASIDDWKTIVRFNQSLVKEIRGREISTERLSLGVKAVLTEPSRGFYTVVEIQNQIVAAALITYEWSDWRNAWFWWIQDVYVESDYRQQGVYRALYNHLRSQAQEQGACGLRLYVYKENYRAQEVYKKLGMVAADSEMFEDIW
>NZ_CP011382.1|WP_035154201.1|3503439_3504228_+|hypothetical-protein
MTLSALVKFVLPPVFASATVFSLMTLPLAIVGDQEINVRFQEEPFFSGKLRDVATPYVILSTALSLGAGVCATAICGWRNSSRKSSQVQEHLSSLEKELQEKEQLLKELMLSESRLQISGLNHFLEVETSLPAHSQQQTVSHRLTQPIVMQTPVAISQPIHEQSSNHTVNAASAFSSAQTFRGYAQTNIQSTENSTAVNRKKPVSVTTLEFEELQQQLREMMRQMQAMQENMQLMPQMEQTKASESFQVHYEVPKTNEVRFT
>NZ_CP011382.1|WP_144416040.1|3502352_3502541_+|hypothetical-protein
MSFYKYTQDLRKHHFPLRGKLSVGKQSQSFWRSRSVLGRVYTPHCTLREGLHLRNDVNTGCL
>NZ_CP011382.1|WP_035154199.1|3501716_3502016_-|30S-ribosomal-protein-S20
MANTKSALKRAKIAERNRLRNKSYKSAVKTLTKKCLTAVDAYVANPSSEAQQELMARMSEAYSKIDRAVKRGILHPNNGARKKSRLARKLKVKTQGVAA
>NZ_CP011382.1|WP_035154197.1|3500844_3501636_-|TatD-family-hydrolase
MQLIDTHVHINFDLFQPDLEAVRSRWLSSGVVHLIHSCVEPSEFPSIQAIAHRFPEVSFAVGLHPLDADKWQENTAEEILALARSDSKVVALGEMGLDFYKADNYQQQYTVFESQLAIATELNLPVIIHCRNAATAMREVLQKWKNSQGDRLRGVMHCWGGEPESAKWFLDLDFYISFSGTVTFKNAKEIQQTATIVNSDRLLIETDCPFLAPVPKRGERRNEPAYVLHVAEKIASLRGETLEAIAMQTTNNACRLFGLNISP
>NZ_CP011382.1|WP_082127332.1|3496864_3500182_-|DNA-directed-RNA-polymerase-subunit-beta
MTNESIMEPAFLLPDLIEIQRSSFRWFLEEGLIEELNSFSPITDYTGKLELHFLGHNYKLKEPKYSVEEAKRRDSTYAVQMYVPTRLINKETGEIKEQEVFIGDLPLMTERGTFIINGAERVIVNQIVRSPGVYYKSEIDKNGRRTYSASLIPNRGAWLKFETDRNDLVWVRIDKTRKLSAQVLLKALGLSDNEIFDALRHPEYFQKTIEKEGQFSEEEALMELYRKLRPGEPPTVLGGQQLLDSRFFDPKRYDLGRVGRYKLNKKLRLSVPETVRVLTSTDILAAVDYLINLEFDIGNTDDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSDAEVLTPASLVNPKPLVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHYGRICPIETPEGPNAGLIGSLATHAKVNLYGFLETPFRPVENGKVRFDLPVSYMTADEEDDLRVAAGDAAIDENGYLIGQVPVRYRQEFSTTTPDQVDYIAVSPVQIVSVATSMIPFLEHDDANRALMGSNMQRQAVPLLKPERPLVGTGLEAQAARDSGMVIVSRTDGDVTYVDATEIRVRPRVTDPNAKNPPQEIRYTISKYQRSNQDTCLNQKPLVRMGERVVAGQVLADGSSTEGGELALGQNIIVAYMPWEGYNYEDAILISERLVQDDIYTSIHIEKYEIEARQTKLGPEEITREIPNVGEDALRNLDEQGIIRIGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGRVVDVRLFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISKILPLEDMPYLPDGSQVDIVLNPLGVPSRMNVGQVFECLLGWAGHNMGLRFKITPFDEMYGEESSRRIVHGKLQETRDETGRDWVYNPDDPGKIMVYDGRTGEPFDRPVTVGVAYMLKLVHLVDDKIHARSTGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEALNAIVKGKSIPRPGTPESFKVLMRELQSLGLDIAVHKVETQADGSSLDVEVDLMADQGNRRTPPRPTYESLSRDSLDEEE
>NZ_CP011382.1|WP_035154191.1|3494862_3496740_-|DNA-directed-RNA-polymerase-subunit-gamma
MRTAQNNQFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCERIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGIPSYIAILLDMPLRDVEQIVYFNSYVVLSPGNAETLSYKQLLSEDQWLEIEDQIYSEDSQLIGVEVGIGAEALLRLLADIQLEQEAETLREEIGNAKGQKRAKLIKRLRVIDNFIATGSKPEWMVMTVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLHIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRSDPSVWDVLEEVIEGHPVLLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSLESQAEARLLMLASNNILSPATGRPIVTPSQDMVLGAYYLTAENPGATKGAGRYFASLDDVIMAFEQQNVDLHAYIYVRFDGEVESPEPDTQVVEETKNEDGTVTKLYKYRRVREDSQGNLLSQYIRTTPGRVIYNKAIQEALAS
>NZ_CP011382.1|WP_035154189.1|3490700_3494765_-|DNA-directed-RNA-polymerase-subunit-beta''
MTNEKHIFRNRVVDKGQLRNLISWSFTNYGTARTAVMADKLKDLGFRYATRAGVSISVDDLMVPPSKRNLLDAAEAEIQATQERYQRGEITEVERFQKVIDTWNGTSEALKDEVVTHFKKTNPLNSVYMMAFSGARGNISQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIIREFDCGTTRGIPLRAMTEGSKILIKLSTRLVGRVINVDVVHPETGELIAARNTPVCDDLAIAIEKAGVEEVVVRSPLTCEAARSVCQHCYGWSLAHAKMVDLGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVAKQVRAEMDCVVKFPKRLRTRPFRTRHGEDALYIEMNGHITIEPTEAGKKAEDISVTQGSTLYITDSQKVKQGQLIAEVALGGRTTRVNTEKAVKDVASDLAGEVKFADVVAEQKTDRQGNTTTTAARGGLIWILGGEVYNLPPGAELVVKNGDRISSNGVLAETKLTTLHGGVVRLPEATPGKSTREIEIITASVVLDQATVTAQSTQGRNNYLVTTGNNQVFNLRATPGTKVQNGQVVAELIDDRYRTTTGGMLKFAGVEVQKKGKAKQGYEVVQGGTLLWIPEESHEVNKDISLLLVEDGQYVNAGDEVVKDIFCQNSGVVEVTQKNDILREVVIKPGELLMVDDPEAVMSKDNTFVQAGEELLGQTVTELRYIQYVETPEGPALISRPVVEFAVPTSPDVPSTTSVSQQTGRSIQMRAVQRLPYKDSERVKSVEGVELLRTQLVLEIEQEGEQDHNTSPLAADIELVPDTENSEVQRLQLVILESLILRRDITADATQGSTQTNLEVQDGDTIAPGAVVARTQILCKEGGIVRGVQKGSENVRRCLVLRQQDLVRKQANAQPRVKVGELIVAGTEILPGVFAEESGQVVEVKSPGTASTTEEGALATQNYSVTVRLGRPYRVSPGAVLQVEDGDLVQRGDNLVLLVFERAKTGDIIQGLPRIEELLEARKPKEACLLAKRSGELKVVYGDGDEAIAAKIIESNGVVTDYTLGPGQNLIFPDGAHIDAGDTLTDGPSNPHEILETFFNLGSEDGIYACASHALQKVQTFLVNEVQSVYQSQGIDIADKHIEVIVRQMTNKVRVDDGGDTTMLPGELVELRQIEQVNEAMAITGGARAQYTPVLLGITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGYNTYDEPGIVDDYTDVMNSNVLDEVDDPLDMVLDDRTARNYNLEVAPIVEGNYGGSVKRSGSILDDDEDLIAGEVSDLIDEEDYDDDDGDDGDDDEDDFDDD
>NZ_CP011382.1|WP_035154208.1|3511862_3512762_-|glutaminase
MSELIDKLAHWIEQVKGKIHQGTVSTYPPLLAATNPNLFAVQINYLSGQTYALGDTQCIFPLMSVIKPFTLLYLLETFGVDRVFQWVGVETTDTAFNSLSQLQADGYPRNPMINSGAIALADKLPGKDTHDCTQSFCQWLNQRAGCQLYIDTKMLASVRLAPSPVNHDITQHLTALGYVTNPELALDLYENICCISGAIADLALLGKLLAVETDLIMSQHRQIVNAVMLTCGLYAASSKYAVTIGLPMKSGISGAVLAVVPGEGAIAIYSPPLDSVGNSIGAIALLEILSQELEMSIFR
>NZ_CP011382.1|WP_168163487.1|3513188_3514310_+|cell-wall-biogenesis-protein
MNKTINNIQKFWHTEKDIIPTLSVRTAFDLLLQSLQLPPGSEVLMSAINIADMVEIVERHQLVPVPVDIDLLTCEPSIPLLEKLVSQKTKILLIAHIFGTIIDLNPYVDFCRQKNLILIEDCAQGFAGNRYYGHWEADVSFFSFGPIKSCTALGGAITLLKDKNLSIQMQEIEATYPQKSETWFFIRILKFMSLKILSFPWIYCQLLSLLKLCGQDLDSTIVAMTRGFAQGDLFIKIRHRPPQHLLWLLSDRLSQCGEFLQRQKTGENFQKILPKNILVPGVKASLHSFWLFPIIVNHPHRVLQYLRTHNFDASRGSTSLIVKESHDQQNHLAPENAKYLMQQILFLPVYPDVPVAELTRLSQCLRDIIENPN
>NZ_CP011382.1|WP_035154211.1|3514478_3516053_+|protein-kinase
MLIGTTLQGGKYTLDQEIGRGGFGITFKATHHFLKQVVVIKTLNEKLRQHPDFPKFERQFQDEARRLATCIHPNIVRISDFFLEDKLPYMVMEYIPGETLGESYVLPSVPLPEVTAIHYIRQIAAALQVVHQNGLLHRDVKPDNIILRQGTQEVVLIDFGIAREYNGGVRQTHTGMVSEGYSPVEQYLSQAPRSPATDVYGLAATLYALLTGQVPMPALLRDRQQMPSPRELQPHITAAANQAVMRGMAIEAKFRPSTVGEWLKLLPEVGVTPMLRVVPTHTVATIDLSAQQAAEQIYQQQGGVNAPVKQGRSPANSSGFFRHPKLMIGAGVAMLAATAGFTVASMITKKPAVSNTTEQQNTTQPTADFPPSVHSVPTQTATPANAETAANTSTIPRRKRSRRNREEIPTQRDINNTRKDNIGTGSDRLNPDNSDTNNSTPKATSSPSLVQKLKIIKKQREAGITTPSNNSTPSPANSVVIPSTDNQKPDSSSVVVPTKEVPTSEPENKSQPLPVKETVEENQE
>NZ_CP011382.1|WP_035154213.1|3516102_3516642_-|phycobiliprotein-lyase
MTSTLQLLQVQEESLIAEFFQKSVGQWRSERRYYTLLKDETKEIVSDLRIRYLHQGCEELLTLAKMHELSDTEILTTGVEVSWNSDNTETGKNESQGVTLFGALGNTLYRDRGFATTKPITATYYLPNSDTLCLRTEYNGSVFEEELKLIGSKYRTRQTIISRAGEQLMIGQYLEKKIG
>NZ_CP011382.1|WP_035154215.1|3517312_3518665_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MIGDGIQAKISLKSVFFSIILTKLNLSMAWLVILGIGIVLSSCGGTSQDKATARQEQGDRTTAVDVAVARKAILQQSLKYTGTTAPFRIVSLRSQVEGQLLALNVDVGDNLKQGQVVGQVDDALLKTSLNQAEAELAALKSEVARATNQVSNARTQFERSRLELLQNRADADRLTKLYKQGAIAQQMAEQARTKASTSIQALRAAVEQVRTEQQAVAAAKGRVIAQAAVVDEARERKSYARLTSPINGVVLEKITEPGNLLRPGNEIFKIGDFSRVKVVVEVSELELSNITQGQSVQVLLDAFPDKKYIGTVTRISPAADSTSRLIPVEIVIPNIDGKIGSGLLTRVNFQSSQTEQVVIPELALQQAEEERKPGNNPGDNPTTTQGKVFVVTEGTEKPQVTQRIVKLGDRADSKVTVLSGLEAGEKYVVRSGKPLKDGDTVRLSILSESK
>NZ_CP011382.1|WP_035154216.1|3518802_3522072_+|MMPL-family-transporter
MNNGFSLSTLSIRQHIGTLVLTVAVIVMGVFFINQLPVDLLPSITYPRIGVRVQAPGVSPEVAIDEITKPLEEVFSATEGVVQVYSQTREGQISLDLFFQPGGNIDQALNDATAAFNRARNQLPDTIEEPRLFKFDPSQQPVYEMALTSPKLRGVDLRIFAEEELARELGVVPGVAGVDVSGAVNEEIRVNIDLNRLQALGVGLTNVLDELENRNQDISGGRILGSNSEPLTRTVGRFKSAEEINNLSFATTGSTSTTSNSQTGDNFSPNLTLGKRRVYLRDFAQVIDGTEKQRVFVLLNGKEAVKVSIQKQPDANTITVVEGVKKRIQELRQSGLIAEEVVLIPTLDESRFIQNSISNVTSSGLIGSLLAAIAVFLFLGSLRQTFIIVLAIPLATLAAIILMGLFGLSLNVFSLGGLALGVGIVVDNSIVMLENIADGIKEGKAEEEREKEVGRESYLTLVKSSSVSSGAKILRQAEKSSQEVESALVASTSTNLVAVLPFLLIGGFISLLFNELILTISFAVAASILIAVTVVPMLTSRMLAWQVSSGVENFWLLRGFNQRFDAATGGYKRFLAWVLRWRIWVVAIAVSLLGGMSLILSPQIPQEILPRINTGQANLIALFPPGTPLETNKKVMTAVDRIIAQQPETEYSFSTIGGFLFGSNTISNPLRSSANITLKPGTNVSDYVERVTQELNKLNLAGIRLRLSPGQVRGLILNNSPVRGAEIDVMLQGSDTQSLQRAGRQVLAALEEKVTAARFRPDADARQPEIQIRPDWERLSKLNLTTKDIGETVQTAIEGSVPTQLQRGNRLVDVRVQLDEKSIQNASQLARLPLFVTDNRQVRLSDVASIIEDQAPGEIQRINQRQVFIIAGNLAENGSLSQALQQVEQAIAQVKLPAGVSLIPSSAQESNRQLQDALWLLGSLASFLVFVVMAVQYNSLVDPLVIMFTIPLALAGGIFGLFVTRTAIGATVIVGAVLLVGIVVNNAIIMVELANQIRERERCDRRTAIIQAAPQRLRPILMTTITTVLGMFPLALGIGEGSEFLQPLGIVVFSGLSLATLLTLFIIPCFYVLLHDLFAGKFMKRFWKG
>NZ_CP011382.1|WP_035154218.1|3522316_3522787_-|nitrogenase-associated-protein
MARVIFYEKPGCKNNTKQKTLLTAAGHEVVSFSIITEPWTIDRLKSFFGDRPIVEWFNRAAPKVQSGEVNPEQVDAQTALVMMLQDPLLIRRPLMEVGDRREVGFDVEKIDAWIGLQSKDSTLQEISNTLKSQDLQSCSHKHGEHHQGAGKGKCQH
>NZ_CP011382.1|WP_035154220.1|3523443_3524055_-|cupin
MQSQDYLLTGNGKYQTCQKPREWNLLRENYRLYRFLTELEDILKDATDESLHLAEIRMLVRRLIVNSYWVRSQYPEPCQQTGTSVLLLYDELGFPFTIQTVTFTPGTKSNIHNHGTWGIVAILQGQEKNTFWQKINDKSQADKIEKKGELILSPGDIISFTSDAIHSVEAVGDIPTVTFNLYGETSPESRFAYNPLDGTAKRF
>NZ_CP011382.1|WP_035154222.1|3524344_3524824_-|hypothetical-protein
MNTSQFSWYQVPDNIKELLILAAETSDNPEKAENYLNQALSQSPESLDILISAYRFFYYKYNYQAALKIALKVVEKIQVSENLPQEWEKLKLVITHNKENPQIRLYINAYAASGLILAKLGKVEEAKEICQQIQEIDSQKEFGTASILLDILTRPPEEE
>NZ_CP011382.1|WP_035154224.1|3524861_3525443_-|heme-copper-oxidase-subunit-III
MTVTGVEHHEEHQDLRVLGLLAFLFSESLMFGGFFATFLYFRNLYSTWPPEGTEVELLLPAINTFILVSSSFVIHLGDAAIKRGDVAGMRKWYKLTAIMGIIFLVGQVIEYLTLGYGLTTNVFANCFYVMTGFHGLHVFVGVLLILGVMRRSHRPDHYSASKHTGVEMAEIYWHFVDIIWIVLFTLIYLLAFI

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Crispr_ID: NZ_CP011382_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_10

3659511-3659588

Orphan

Consensus_repeat	Method
AATTTCTAAATCAGAATTATCAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_10

>merge|NZ_CP011382|10|3659511-3659588|CRISPRCasFinder
AATTTCTAAATCAGAATTATCAGAAGCAGATTGAGGTTGTGTAGTTTCCGGGGGAATTTCTAAATCAGAGTTATCAGA

>NZ_CP011382|10|9|3659511-3659588|CRISPRCasFinder
AATTTCTAAATCAGAATTATCAGA	AGCAGATTGAGGTTGTGTAGTTTCCGGGGG
AATTTCTAAATCAGAGTTATCAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035154371.1\|3668560_3669493_-\|phytoene-synthase	unknown	unknown	gnl\|CDD\|215339
NZ_CP011382.1\|WP_035159121.1\|3654233_3655505_-\|glycosyltransferase-family-1-protein	unknown	unknown	gnl\|CDD\|340830
NZ_CP011382.1\|WP_035154353.1\|3650797_3651409_-\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP011382.1\|WP_035154356.1\|3653658_3653979_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154364.1\|3661786_3662128_+\|DUF4870-domain-containing-protein	unknown	unknown	gnl\|CDD\|378240
NZ_CP011382.1\|WP_035154362.1\|3660019_3661645_-\|peptide-chain-release-factor-3	unknown	unknown	gnl\|CDD\|179105
NZ_CP011382.1\|WP_035154355.1\|3653217_3653616_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_082127337.1\|3671608_3671890_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP011382.1\|WP_035154352.1\|3649128_3650184_+\|c-type-cytochrome-biogenesis-protein-CcsB	unknown	unknown	gnl\|CDD\|214346
NZ_CP011382.1\|WP_035154365.1\|3662706_3663687_+\|porphobilinogen-synthase	unknown	unknown	gnl\|CDD\|236450
NZ_CP011382.1\|WP_035154373.1\|3669476_3670916_-\|15-cis-phytoene-desaturase	unknown	unknown	gnl\|CDD\|131778
NZ_CP011382.1\|WP_035154369.1\|3666793_3668128_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|380569
NZ_CP011382.1\|WP_168163392.1\|3662032_3662272_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154354.1\|3651452_3652457_-\|serine/threonine-protein-phosphatase	unknown	unknown	gnl\|CDD\|277366
NZ_CP011382.1\|WP_035154368.1\|3665781_3666501_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154359.1\|3656627_3657113_-\|RNA-binding-protein	unknown	unknown	gnl\|CDD\|214636
NZ_CP011382.1\|WP_035159119.1\|3652550_3652940_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154357.1\|3656104_3656494_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154367.1\|3663864_3664659_-\|WecB/TagA/CpsF-family-glycosyltransferase	unknown	unknown	gnl\|CDD\|377136
NZ_CP011382.1\|WP_046814828.1\|3650321_3650666_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370166

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035159121.1\|3654233_3655505_-\|glycosyltransferase-family-1-protein	gnl\|CDD\|340830	cd03800, GT4_sucrose_synthase, sucrose-phosphate synthase and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.	1.22856e-167
NZ_CP011382.1\|WP_035154353.1\|3650797_3651409_-\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	9.507e-28
NZ_CP011382.1\|WP_035154364.1\|3661786_3662128_+\|DUF4870-domain-containing-protein	gnl\|CDD\|378240	pfam09685, DUF4870, Domain of unknown function (DUF4870).	1.20152e-20
NZ_CP011382.1\|WP_035154362.1\|3660019_3661645_-\|peptide-chain-release-factor-3	gnl\|CDD\|179105	PRK00741, prfC, peptide chain release factor 3; Provisional.	0
NZ_CP011382.1\|WP_082127337.1\|3671608_3671890_-\|hypothetical-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	1.49132e-09
NZ_CP011382.1\|WP_035154352.1\|3649128_3650184_+\|c-type-cytochrome-biogenesis-protein-CcsB	gnl\|CDD\|214346	CHL00045, ccsA, cytochrome c biogenesis protein.	2.52627e-162
NZ_CP011382.1\|WP_035154365.1\|3662706_3663687_+\|porphobilinogen-synthase	gnl\|CDD\|236450	PRK09283, PRK09283, porphobilinogen synthase.	0
NZ_CP011382.1\|WP_035154373.1\|3669476_3670916_-\|15-cis-phytoene-desaturase	gnl\|CDD\|131778	TIGR02731, Phytoene_dehydrogenase_chloroplastic/chromoplastic, phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other].	0
NZ_CP011382.1\|WP_035154369.1\|3666793_3668128_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|380569	cd06346, PBP1_ABC_ligand_binding-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in uptake of amino acids, peptides, or inorganic ions. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	2.30994e-107
NZ_CP011382.1\|WP_035154354.1\|3651452_3652457_-\|serine/threonine-protein-phosphatase	gnl\|CDD\|277366	cd07423, MPP_Prp_like, Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. Pnkp is the end-healing and end-sealing component of an RNA repair system present in bacteria. It is composed of three catalytic modules: an N-terminal polynucleotide 5' kinase, a central 2',3' phosphatase, and a C-terminal ligase. Pnkp is a Mn(2+)-dependent phosphodiesterase-monoesterase that dephosphorylates 2',3'-cyclic phosphate RNA ends. An RNA binding site is suggested by a continuous tract of positive surface potential flanking the active site. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.	4.20976e-28
NZ_CP011382.1\|WP_035154371.1\|3668560_3669493_-\|phytoene-synthase	gnl\|CDD\|215339	PLN02632, PLN02632, phytoene synthase.	7.24373e-157
NZ_CP011382.1\|WP_035154359.1\|3656627_3657113_-\|RNA-binding-protein	gnl\|CDD\|214636	smart00360, RRM, RNA recognition motif.	3.14953e-17
NZ_CP011382.1\|WP_046814828.1\|3650321_3650666_+\|hypothetical-protein	gnl\|CDD\|370166	pfam08872, KGK, KGK domain. This presumed domain is found in one or two copies in cyanobacterial proteins. It is named after a short sequence motif.	9.15254e-07
NZ_CP011382.1\|WP_035154367.1\|3663864_3664659_-\|WecB/TagA/CpsF-family-glycosyltransferase	gnl\|CDD\|377136	pfam03808, Glyco_tran_WecB, Glycosyl transferase WecB/TagA/CpsF family.	6.10969e-75

>NZ_CP011382.1|WP_035154359.1|3656627_3657113_-|RNA-binding-protein
MSVRLYIGNLPKEEIDRQELQAVFADEGDAVTTKLIKDRKTGKCRGFGFITVNSDEQADQIIEKYNGQMFKESAIKIEKALPRTKGEEGEEQQAPKVVSSPTPGGGNREGSRKEKGQKKARRGSSVKETSSSGDGDAIRPDPRWASELEKLKQMLAAQATN
>NZ_CP011382.1|WP_035154357.1|3656104_3656494_+|hypothetical-protein
MKLEFVPVEDFYFALTLAVRTLEDIETPGLVAQVRSLLWEKCGQPSTVAPGKQNTFNYVFSVQDIDNSPAPGLVVSVSDWQDKLRLASDYGWTLDTERKPIRTEKFSDRQQFTQELRSHLQTWLQIPLI
>NZ_CP011382.1|WP_035159121.1|3654233_3655505_-|glycosyltransferase-family-1-protein
MNSRTERRIALISVHGDPAIEIGKEEAGGQNVYVRNVGEALADLGWQVDMFTRRVSEEQAEIVQHKENCRTIRFSAGPLEFIPRDNLYIHLPEFVEHFLAFQKENGYTYPLIHTNYWLSSWVGMQLKKIQGSQQVHTYHSLGAVKYNTVKTIPLIATTRLATEKELLETAQRVVATSPQEKEHMRSLVSTKGNIDIIPCGTDIHRFGCVDRQTARAQLGIAEDAQVVMYVGRFDHRKGIETLVRAVAQSQFRDQGKLQLIIGGGSVPGQSDGIERDRIEGIVKELGMEDFTTFPGRLSQEILPYYYAAADVCVVPSHYEPFGLVAIEAMASYTPVVASDVGGLQFTVVDGETGLLAPPEDHDAFAIAIDKIISNPAWRNKLGEAARKRVENKFSWGGVASQLSDLYLQLLQPTFQEKAMLLSS
>NZ_CP011382.1|WP_035154356.1|3653658_3653979_+|hypothetical-protein
MLRNIFSVLKYLLSAALSVCAVFLSGFASLFIRDLLKGKNYSDVGVPMYENYGVATLAGMLVFAIVLFVCLYILQHTLSRNLQMFPYIVAILACIAFSPILVLLLF
>NZ_CP011382.1|WP_035154355.1|3653217_3653616_+|hypothetical-protein
MENEIFVYQPGEQHIYDWSGNQLAPEARSYITVNNIVRIQVNDRNLDYWEAVYVQITAIDENDILTATVLDTYRTMVQETDVQDGEILHFPRACVMEIPHTWENNENLVIVENMKTGYGREVTGVFMDEPSS
>NZ_CP011382.1|WP_035159119.1|3652550_3652940_+|hypothetical-protein
MGSQKVVNFISGHLDITQAEFDIHYRPLIERAIAQNECFILGDARGTDTLAQEYLWGRTEAVIVYHMFTSPRNNPGFLTRGGFRSDVERDTQMTLDSDQDIAWVRPGREQSGTQANRDRRNSLTSKSIK
>NZ_CP011382.1|WP_035154354.1|3651452_3652457_-|serine/threonine-protein-phosphatase
MRTIVVGDIHGCYTELMQLLTKVEITEADCLVSLGDIVDRGVDSVKVYEFLKNRPNTIVLMGNHERKHLKQTLSYSQEIVKLQFGDSYEDFLEWVSHLPYYHETKQAIFVHAAVENGIPMQKQREEVLCGCTAGEKHLEKRYGNAYWSQLYTGTKPVIFGHRVVGDNPLIIDHKAYGIDTGACHGGKLTALILPSFEIVHVQAAKDYWQEEIVKWQLPVMMAKPWGSYKWEKIQGICHEFKNSANPELVAFIVEKEQWMHDLLAQTPKVILKIQEKLAELISLYGVDDFKKPARNFSYAALLYKANASNLTREFLQQTLPTPDKWLQVMKELEI
>NZ_CP011382.1|WP_035154353.1|3650797_3651409_-|LysE-family-translocator
MTSSSMVALFTAMVILAAIPSISVLTVSTKSATSGFIHGVFTTIGIVVGDIFFIILAIWGLSFLAETIGNLFVLIKYLGGVYLIFLGISLCRSKLSDIELQKGAKSSLLSSFIAGLLITLGDQKATLFYLGFFPAFIDIHKISYLDTIIIIAITILSVGSVKLIYALMADRAKLLMNTKARQAINTVAGCVMIGIGIFLLAKP
>NZ_CP011382.1|WP_046814828.1|3650321_3650666_+|hypothetical-protein
MSEQWETLDQNDVIVFNDFAYDSEHTKLVSDFIKILKHASLNGNSLSTLFEQGLNCAVLIPGKEWRLGKIKLSLEFASDELKDIEHDLSNTTIEKSPLDDLREKIKRIEDDKCQ
>NZ_CP011382.1|WP_035154352.1|3649128_3650184_+|c-type-cytochrome-biogenesis-protein-CcsB
MNLVILQNWLDNASFAVLFLTMLIYWGSAAFPNIPYLPALGTAGMAIANLSIATLLGARWIEAGYFPLSNLYESLFFLTWGITAVHLIAENNSKSRLVGVATAPIAMGITAFATLTLPSEMQVSEPLVPALKSNWLMMHVSVMMLSYSALMVGSLLAIAFLVVTRGQNIQLQGSSFGNGGYRTNGYSLRKAGELVTEPITTSIENNGFTRYETNSNGNGNTAVLQTVPATQITNNPTTQTLSPQRLSLAETLDNISYRIIGLGFPLLTIGIIAGAVWANEAWGSYWSWDPKETWALITWLVFAAYLHARITRGWQGRRPAILAASGLIVVWICYLGVNLLGKGLHSYGWFL
>NZ_CP011382.1|WP_035154362.1|3660019_3661645_-|peptide-chain-release-factor-3
MSIELESEISQAVERRRNFAIISHPDAGKTTLTEKLLLYGGAIHEAGAVKARRAQRKATSDWMAMEQQRGISITSTVLQFAYQACQINLLDTPGHQDFSEDTYRTLAAADNAVMLIDVAKGLEPQTRKLFEVCKLRGIPIFTFVNKLDRPGREPLELLDEIEQELGLQTYAVNWPIGMGDRFKGVYDRQEEQIHLFERSAHGSKEAVDTVVNLGDAQIEELLEQDLYFQLKNDLELLEGVGPELDLELVHQGKMTPVFFGSAMTNFGVELFLKYFLAYALKPGVHSSSVGEVAPTYPEFSGFVFKLQANMDPKHRDRVAFIRVCTGKFEKDMTVNHARTGKSVRLSRPQKLFAQERESIDVAYAGDVIGLNNPGVFAIGDTIYTGQKLEYEGIPYFSPELFAVLRNPNPSKFKQFQKGVSELREEGAVQIMYSVDEAKRDPILAAVGQLQFEVVQFRLQNEYGVETILDLLPYSVARWVAGGWEAVEKVGRLFNTTTVKDNLGRPVLLFRNEWNCQQLESDHPELKLTAIAPVGSSVAQEG
>NZ_CP011382.1|WP_035154364.1|3661786_3662128_+|DUF4870-domain-containing-protein
MYDPDKRKLLSAICHGAIFFSTTFVSIGIPIFILFVTNDSVVKENAKEAINFHLNVWFYGIIIGILIWLSFGLLFPLAGLGVLLHWGLTIWALFHVLSDTDKPFRYPFIFRLL
>NZ_CP011382.1|WP_168163392.1|3662032_3662272_-|hypothetical-protein
MMGMLLVTKLMVNPSESQLWCQQRLTNFRLEHNNYLTLIAPNHHREWQLQQAENKRVAKWFVSITQNMEKRPDCQTPMQ
>NZ_CP011382.1|WP_035154365.1|3662706_3663687_+|porphobilinogen-synthase
MFPTHRPRRLRTHPQLRRMVRETVLTTSDLIYPLFAVPGTGIAKEVKSMPGVYQLSIDKIVEEAKEVYDLGIPAIILFGIPTEKDDDATGAWHDCGIVQKATAAVKAAVPELIVINDTCLCEYTSHGHCGYLQVGDLTGRVLNDPTLELLKKTAVSQAQAGADIIAPSGMMDGFVQGIRGALDAAGFQDIPIMSYAAKYASAYYGPFRDAAESTPQFGDRRTYQMDPGNAREAIKEIQLDVAEGADMLMVKPALAYMDIIWRVKEASNLPVAAYNVSGEYSMVKAAALNGWIDEQRVVMETLTSFKRSGADLILTYHAKDAARWLG
>NZ_CP011382.1|WP_035154367.1|3663864_3664659_-|WecB/TagA/CpsF-family-glycosyltransferase
MGKVRILNLDIDNLSLTELLAKLETGMIFTPNVDHLIKLQSDSEFLQAYNTCDYKLCDSQLILYAAKFLGTPFQEKISGSDLFPAFYQYHQKNHDIRIFLLGAAQGIALTAQNKINQKVGRDIIVASYSPPFGFENNFQECQKIINMINRSKATVLVIGVGAPKQEKWLAKYKDLLPGIKIFMALGATIDFEAGNIQRAPKWMSQVGLEWLFRLLCEPKRLWRRYLVEDTAFFSLILKQKIKNYMRKKHRYSTQYWQLFQKMWN
>NZ_CP011382.1|WP_035154368.1|3665781_3666501_+|hypothetical-protein
MNTIILSKKLSYCLGLAAVAVLSADLTAVAQTTETPLGDENPSQVNVVSVENASKNTQIPVPGTVTTSSANLRQENSVKEFPSVTNPNQVAQAEINPGRSTRGGSSYLGVAGNIGLGGDSALGDGNFMVLSKIGLTRSISVRPSVVFGDDTVFLLPVSYDFNFQSVNDPFSEPLPIAPYIGAGAALKTGDDSQVAFLVSGGIDVPLNSQFTATAAVNAAFFDKTDVGLAIGIGYNFSGF
>NZ_CP011382.1|WP_035154369.1|3666793_3668128_-|ABC-transporter-substrate-binding-protein
MAKTNTAIALALVTMATGFLAAACEETTQTNNNTATTSPAANSTPAPSDAKGLKIGSLLPSTGDLASVGQQMVGSVPLLVENVNACGGVNGEKVTLTEVDDQTDPKAGAAGMTKLATLDKVAGVVGSFASSVSSAAISIAVPNKVMLVSPGSTSPKFTEQAQKGEFKKNNPNNFWARTAPPDTYQALALAQLAKKKGFKRVSTVVINNDYGVGFEKAFVSAFEKLGGTIINKDKPVRYDPKAQTFDTEASAAFAGKPEAVIAVLYAETGSLFLKSAYTQGLTKGVQIMLTDGVKSPSFPEQVGKGSDGKYIITGAIGTVPGSNGKALEAFNKLWKEKKPGTTPGEYSPQAWDAAALLTLAAQAAKENTGVGIASKIREVANAPGTEVSDVCEGLKLLKEGKDIDYQGASGNVDVDENGDVVGVYDVWTVGDDGKIKVIDQVSPK
>NZ_CP011382.1|WP_035154371.1|3668560_3669493_-|phytoene-synthase
MLQLPDSPPRMKKLVSPDESYQLCRQITAKYAKTFYLGTLLMSQAKRPAIWAIYAWCRRTDELVDGPAAAMTTPETLDEWEQQLETLFAGQPVDDIDVALVDTLQRFPIDIQPFRDMIAGQRMDLYRSRYETFDELYLYCYRVAGTVGLMSTAVMGIDTEQNRSPWNYHQQPYIPTEEAIALGIASQLTNILRDVGEDSRRGRVYIPLEDMARFNYTEQDLFRGVVDDRWRELMRFQIARTRHFYRQAEKGISYLSPDARLPVWAALMHYSKILERIESNGYDVFSQRAYVPQWRKMLSLPVAWLRSQVL
>NZ_CP011382.1|WP_035154373.1|3669476_3670916_-|15-cis-phytoene-desaturase
MRVAIAGAGLAGLACAKYLSDAGYTPIVLESRDVLGGLVAAWKDEDGDWYETGLHVFFGAYPNMLQLFKELGIEDRLQWKEHTLIFNQPEKPGTYSRFDVPDIPAPLNVIVSILRNNDMLTWEQKIRFAVGLLPAVVRGQNYVEQMDKYSLLEWLQLQGVDERVNSDIFIAASKALTFINPEDVSATVPLTALNRFLQERYGSKIAFLDGSPTERLCQPIVDHITERGGEVRLNAPLKEIVLNEDGTVKHFVLRGLNGSSEEILTADAYVCATSVDVAKVLMPEPWKKIEFFQKMASLEGVAVINLHLWFDRKLTDIDQLLFSRSPLLSVYADMSNTCRGYADPNKSMLELVLAPAADWIDKSDAEIIQATMAELERLFPQHFGGENPAQLLKTRVVKTPRSVYKAVAGSQKYRPSQKTPISNFYLAGSYTMQRYLGSMEGAVLSGKLTAQVIAQAQPVNDSDRLETPTRPPATNAATA
>NZ_CP011382.1|WP_082127337.1|3671608_3671890_-|hypothetical-protein
MSLRINYSETVSIFPPRAKSLTRYVKIFTLCSELSFTIYPTLGTAYIIQRELIQEPITEIFLNLQVGQMPVGVEYAQEKIKLLWMQKNPPGFG

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Crispr_ID: NZ_CP011382_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_11

3727152-3727261

Orphan

Consensus_repeat	Method
GTTACGATGGAGAGCGCGAGCTAGGGGCGATCGCCAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_11

>merge|NZ_CP011382|11|3727152-3727261|CRISPRCasFinder
GTTACGATGGAGAGCGCGAGCTAGGGGCGATCGCCAGTTGGAATTAATGCAGGACATAAAATTAATTTTTTAGTTACGATGGAGAGCGCGAACTAGGGGCGATCGCCAGT

>NZ_CP011382|11|10|3727152-3727261|CRISPRCasFinder
GTTACGATGGAGAGCGCGAGCTAGGGGCGATCGCCAGT	TGGAATTAATGCAGGACATAAAATTAATTTTTTA
GTTACGATGGAGAGCGCGAACTAGGGGCGATCGCCAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035154443.1\|3725314_3726229_+\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|215315
NZ_CP011382.1\|WP_035154458.1\|3733382_3735509_-\|low-complexity-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP011382.1\|WP_035154437.1\|3722929_3723361_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154432.1\|3719900_3720833_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP011382.1\|WP_035159128.1\|3736565_3737006_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154430.1\|3718930_3719878_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP011382.1\|WP_035154450.1\|3727534_3730303_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|368641
NZ_CP011382.1\|WP_082127447.1\|3722211_3722763_+\|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase	unknown	unknown	gnl\|CDD\|235612
NZ_CP011382.1\|WP_035154460.1\|3735566_3735905_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|285709
NZ_CP011382.1\|WP_035154465.1\|3738434_3739043_+\|biopolymer-transporter-ExbD	unknown	unknown	gnl\|CDD\|223917
NZ_CP011382.1\|WP_035154454.1\|3731324_3732482_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213362
NZ_CP011382.1\|WP_035154445.1\|3726277_3726529_-\|TIGR03643-family-protein	unknown	unknown	gnl\|CDD\|378528
NZ_CP011382.1\|WP_035154428.1\|3718216_3718825_-\|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl\|CDD\|236703
NZ_CP011382.1\|WP_144416041.1\|3724354_3725227_-\|shikimate-dehydrogenase	unknown	unknown	gnl\|CDD\|234703
NZ_CP011382.1\|WP_035154463.1\|3737619_3738393_+\|MotA/TolQ/ExbB-proton-channel-family-protein	unknown	unknown	gnl\|CDD\|223881
NZ_CP011382.1\|WP_035154439.1\|3723576_3724185_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154452.1\|3730577_3731288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154456.1\|3732709_3733204_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154434.1\|3721192_3721960_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154462.1\|3737102_3737411_-\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035154443.1\|3725314_3726229_+\|alpha/beta-fold-hydrolase	gnl\|CDD\|215315	PLN02578, PLN02578, hydrolase.	3.23189e-90
NZ_CP011382.1\|WP_035154454.1\|3731324_3732482_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213362	cd12828, TmCorA-like_1, Thermotoga maritima CorA_like subfamily. This subfamily belongs to the Thermotoga maritima CorA (TmCorA)-family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of this subfamily are found in all three kingdoms of life. It is functionally diverse subfamily, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes Methanosarcina mazei CorA which may be involved in transport of copper and/or other divalent metal ions. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by a related protein, Saccharomyces cerevisiae Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	3.25481e-169
NZ_CP011382.1\|WP_035154432.1\|3719900_3720833_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	9.71522e-31
NZ_CP011382.1\|WP_035154430.1\|3718930_3719878_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	2.4305e-84
NZ_CP011382.1\|WP_035154450.1\|3727534_3730303_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|368641	pfam05860, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	2.00586e-21
NZ_CP011382.1\|WP_082127447.1\|3722211_3722763_+\|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase	gnl\|CDD\|235612	PRK05800, cobU, adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; Validated.	2.40229e-87
NZ_CP011382.1\|WP_035154460.1\|3735566_3735905_-\|hypothetical-protein	gnl\|CDD\|285709	pfam08537, NBP1, Fungal Nap binding protein NBP1. NBP1 is a nuclear protein which has been shown in Saccharomyces cerevisiae to be essential for the G2/M transition of the cell cycle.	0.00715546
NZ_CP011382.1\|WP_035154465.1\|3738434_3739043_+\|biopolymer-transporter-ExbD	gnl\|CDD\|223917	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion].	2.54119e-30
NZ_CP011382.1\|WP_035154458.1\|3733382_3735509_-\|low-complexity-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	4.94317e-37
NZ_CP011382.1\|WP_035154445.1\|3726277_3726529_-\|TIGR03643-family-protein	gnl\|CDD\|378528	pfam10985, DUF2805, Protein of unknown function (DUF2805). This is a bacterial family of proteins with unknown function.	1.92744e-39
NZ_CP011382.1\|WP_035154428.1\|3718216_3718825_-\|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl\|CDD\|236703	PRK10502, PRK10502, putative acyl transferase; Provisional.	7.69842e-111
NZ_CP011382.1\|WP_144416041.1\|3724354_3725227_-\|shikimate-dehydrogenase	gnl\|CDD\|234703	PRK00258, aroE, shikimate 5-dehydrogenase; Reviewed.	1.11729e-124
NZ_CP011382.1\|WP_035154463.1\|3737619_3738393_+\|MotA/TolQ/ExbB-proton-channel-family-protein	gnl\|CDD\|223881	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion].	4.35359e-48
NZ_CP011382.1\|WP_035154462.1\|3737102_3737411_-\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	3.69874e-20

>NZ_CP011382.1|WP_035154445.1|3726277_3726529_-|TIGR03643-family-protein
MKLPDLSQEIIDRIVEMAWEDRTPFEAIEIQYGLFEKEVIALMRREMKASSFKMWRERVTNRKTKHLYKRDFISGRFKSDNQK
>NZ_CP011382.1|WP_035154443.1|3725314_3726229_+|alpha/beta-fold-hydrolase
MQVTTTPSTSPIPGKYWQWRGHNIYYVCAGEPQGKRPPLLLIHGFGASTDHWRKNISELCDDFQVWAIDLLGFGRSAKPKLQYSGDLWRDQIHDFIMEVIGQKTILAGNSLGGYACLCVASQCPEAAAGVVLLNSAGPFSDNQSQLKSAPQPTPVQKLVGKFAKSIFQQSWTRFLLFQYIRQPWVIRRTLEKVYLDKSAITDQLVAEIQRPSGDRGAFDVFSSVFSTPQGEKVDILLQQLTTPLLLLWGEGDPWMNARERSQKFRQYYPQLTEHFLTAGHCPHDEVPNQVNSLLKDWVLSLNKA
>NZ_CP011382.1|WP_144416041.1|3724354_3725227_-|shikimate-dehydrogenase
MHNMITGKTKLLGVIGHPVEHSLSPLMHNAAIANLGLDYIYLPFPIKPQDLRAAMDGFAAIGVVGFSVTIPHKQAIIPFLGTVQPIAEAVGAVNTVVRKDGQWLGTNTDVPGFVSPLQNLQIDWQQKQVVILGNGGAARAVVAGCTELGCQKIHVVGRNLQRLKEFHQSWENSPLAVNLQVHKWEALRELIPYADLLVNSTPIGMYPKVNESPLSQEEMAELPSGAIAYDLIYTPNPTQFLQQAQTVGAVAIDGLEMLVQQGAVALKMWLDRADVPVDVMRQSLLQYLGR
>NZ_CP011382.1|WP_035154439.1|3723576_3724185_+|hypothetical-protein
MTQEEIEAALLSAFSACQVASCPLTETQKNIILQAMRQNQTQHNSVLEEVVNPLDKLNAEELRKFLNFVQYQQQENSSWKAQLLNDWLHENDSGAVQFLRDRYGVSWLDQIEQYHIDKYLRLEQDTIHLGDRIEVCNALWEWVQEQGPCSREWFSCIVIQVDEIPGNSEIESSTNCIVRFDNGSEYEISGIYEWNRHNWRKG
>NZ_CP011382.1|WP_035154437.1|3722929_3723361_+|hypothetical-protein
MANKNDVKKYLAYWFQIGKGVVVSHGKATLKPLKIIDGDRYSDEFEACWQKIIFDYKGNCYLEGTHQTVAELLSPQWEIFACARCTMPVPLPTLGISGAPCPCNDLPDWPNTELPLPHCPVDSQDCLQKIRDRLLQNTELTSI
>NZ_CP011382.1|WP_082127447.1|3722211_3722763_+|bifunctional-adenosylcobinamide-kinase/adenosylcobinamide-phosphate-guanylyltransferase
MNQSKVILVTGSTRSGKSEWAETLALESQKQVVYIATATRNPNDGEWEKRIQQHQQRRPENWIIEEVPIHLSATLNNAQANNCLLVDSLGTWVANLLEEDEESWQGIVSELFETINSVSAEIIFVAEETGWGVVPAYEMGRKFRDRLGSLIRYLGEMCDSVYLVTGGHVLNLSLLGSPLTAKK
>NZ_CP011382.1|WP_035154434.1|3721192_3721960_-|hypothetical-protein
MKASIKRIEATLHDLGNRPQTSEVTENSKSPVSFRISVGKTEQTEETKQTVPSEVEISTEETILSHHPSVQTFQVEDTEGKIPSLPKFKTPSLSSHRNGANPALAMNLLQEIQEVVAGWQTELQKIVRQVQDVYLEGPIVNGWLESYHLTKPEETDGKATLRHAEVDDLMNYVEEICTPKEKNSDSKHSGYKLCGLDASGTVWSRPCPPDQVASVSMAIARYQKLRQLLGRKQYLETRLSQLAETLVVLHSHIQS
>NZ_CP011382.1|WP_035154432.1|3719900_3720833_-|glycosyltransferase-family-2-protein
MPDKQISAIICTHNRDTYLGAAIDSLLAQDFAAGFEVIVVDNGSSDRTRQVVESRLSNPKLKYIYEPVLGLSVARNAGAQAAQGDILAYLDDDAVASPQWLRVLYNAYEQNAQLAIAGGKVTLIFPEGVSPPRWLSQGLAANLGAYDLGATQVYIENPGLTPRGLNYSIRRCFLADIGGFDPNLGRVGKNLLSNEELQMTELALQRGWQVAYIPEAIAAHNVPLERLQRSWYFNRGWWQGISECYREQLAGKAGFGQLQRGSERFLRGLYKTLQYISDPAERFDKLVYAYGQIGYLNAAIQGIISTSHKK
>NZ_CP011382.1|WP_035154430.1|3718930_3719878_-|glycosyltransferase-family-2-protein
MSSKVPVSVLIPAKNEQANLPACLASVERADEIFVVDSQSSDRSEEIAQSYGAKVVQFNFNGRWPKKKNWSLENLPFRNEWVLIVDCDERITPELWEEIDQAIANPEFNGYYLNRRVFFLGQWIRHGGKYPDWNLRLFRHEKGRYENLSTEDIPNTGDNEVHEHVVLDGKVGYLNNDMLHEDFRDLFHWLERHNRYSNWEARVYLNLLTGKDDNGTIGASLFGDAVQRKRFLKKIWVRLPFKPFLRFILFYIIQRGFLDGKAGYIYGRLLSQYEYQIGVKLYELRNCGGQLNTKKSQPQTDEIKIKPSLPQEMSC
>NZ_CP011382.1|WP_035154428.1|3718216_3718825_-|colanic-acid-biosynthesis-acetyltransferase-WcaF
MTTNSPAFVDLRKYDQSWYDRGRPGWYVFLWWLVQAIAFPLTLHSFNGIRCNLLRLFGARIGKDVIIRPTARFTYPWKITIGDYSWIGDDVVLYSLDQITIGEHCVISQKSYICTGSHDIYDPSFQLKTAQVTIQNGVWVATDCFVAPGVTIGANAVIGARSSVFSDIPDSQVSWGTPCRPHYARVMTGDKLETATVSSPSR
>NZ_CP011382.1|WP_035154450.1|3727534_3730303_+|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MQLTRVHFPLFTTLLVFACLNSLAATAQVTPDSSLSTKVDSIDKKNFTILNGTQAGKNLFHSFKDFSIPFNGSAVFQNNLDIKNIFSRVTGGNLSNIDGLLKVSGNANLYLINPAGITFGKNATLNVGGSFFATTAKSLLFSDGMEFSALKAETPPLLSVNIPIGLKFRDNPKGITNLATNFFELATGKNFTLVGGEVKFDGGKVYAPGGRVTLGGLSQAGTVKINNDGSLQFPQSIVRADVFLNNGSWVDVTNIGGGNIDVYAQNLRISNGSYLLAGINGKGTANTKAGDIKINATGRVTLDKENNNSVSTAIANTVFSSSIGNAGNIFIIANSLLVKDRSLIASYTLGKGNAGNIFITAESLLVSGGAQINSSTLGIGNAGNINLKIINNATFSETYLFQSSGLFSAVGSNAKGNGGAINVQAGSLNLLKGAQFRTSTLGDGNAGNINLKITNNATFDGAYLYIPSGLQSAVDFSGNGNGGDINITSDSLNILNGAQFISTFRSTGLSSPIARGRKSGNINIKIFNTFKIDGFTTYTIPNSKKQTAPSGIFSGLKTNQGRGGDIVITAKNFFITNGGIISSNTSNFSKGDAGNIDIRVTDTINISGQILGFDTNGKSKVFLSSILSEVEEGANGKGGNIFIDPKRIIISEGGVISVNSLGNGSAGNIELIAGGLILNNGFITANAGKSRGGNIKLQLSDFLLLRNNSKISTNASGDGGNITINSPFIVAFPKDNSDITANSIDKQGGNIKINASSIYGIQARIQGNPLTNDITASSENGISGNIDVNNLQIDASQGLIELPEGTLDKYQVIRNEICRKFSKGSQFIIVGRGGIAENPTEMINNNNTRIDLAEPITNNLSTTNQTHAKPHLSPNKTISSDNIVPARGWVMNEKGEVILTAYDPTESGVARPLTVAKYCSGM
>NZ_CP011382.1|WP_035154452.1|3730577_3731288_-|hypothetical-protein
MTTTAGDGNLVYLTLYIIGVLYTFNRMIESIDEKIQFSFDKASVDKQLQEQELQNDVGIGFRFNTFYDIDELKELSLSVENKSQNIAIYVDWDNSSLVVEHDKQSRRVIRKSPDITRDLAVLQSPSLVAPGKTLSQVVTAEDVFQRDKESGTYKVNSPLVNISKLKSGQKPQKKMYNDFMEERRTFEFSLQLVLRLSEVRLGLAPGVNVPPMCIVNCPFTIKKLPWTYALPWNKKK
>NZ_CP011382.1|WP_035154454.1|3731324_3732482_-|magnesium/cobalt-transporter-CorA
MNQHELRFMTQEKLDIEEDDNEIDDYYHHPGLIPGEIVIDEDASLPVIVLIDYCAETVIRQEINNPEECVPYLDSESVSWVDVQGLGSAAILQRLGKVFDLHPLILEDIVNVPERPKVEDYEDQIVIISRMVMPRKKGGFYSEQVSFVLGKSYLLTVQEEPERDSFEPVRSRLLRDKGIIRKQGADYLAYALLDAIIDGFFPVLEMYGDRIEELEEEAITNPSKNTLNKIYKIRRELLQVRRAIWPQRDAINSLIRDGHDLINEEVRIYLKDCYDHTIQIIDMVENYREIASGLMDVYLSAVGNKMNEIMKVLTVVSTIFIPLTFIVGIYGMNFNTDKSPYNMPELDWYWGYAFCWGIMILIATILLFLFWRWGWLQNSSRIDRN
>NZ_CP011382.1|WP_035154456.1|3732709_3733204_-|hypothetical-protein
MRHISYLIPAALVGSLLSLTALSQPVNAQAAYGSYVGVGPTVGFSDGMQLGAVVSARYKLLETPISFRAQALVANNIAIVPTVSYDIPLNWQTDAYLGAGLVLAGGDSPSPVGNKVSFALQPGVDYMVPNSNLAIFGNAIIAFDAFRDGGGTALSVQGGVGLRF
>NZ_CP011382.1|WP_035154458.1|3733382_3735509_-|low-complexity-protein
MATPTVRRSKQQSSNEFPQSGKSPSLSLNMRRFAAWTTEMTLVVASGLIPFSMGAYANSFRDLNRVPLNPLLVATEREVARPLALPVSYGTRNVAFPTNFLWTVAILAPITVSFCQLYLLATRGSSLPKRWFGVKVVNSQGNAPGFGAIAVREGVGRWTVPVAVAYYLWRYSPVFPNILILTGLAGLIMLSESMGFPWQKKRRALHDQLAATYTIDANQPFNPSELIEETIPWTENTDEEAAIASVVMTPEPAPKVSLRDKLRQNPSTTLLGVALFSMAGVLTALIGTQIYIQTQQSRLAEEQKYSQQFLTFAQRLSPNSKASIEERRTAILALGTLKYPQGTKYLVNLLTRETNPILIDAIQQALANIGTSAIPELKRTNHSLVGDLDNTNSTSPGRELRQSRLSANQRAISKILTVYSGQTLGIDLSRINLAQSGLILDKIDLWGVKFRGANLSQGSLKGASFRGIGEDGRWDTYDDWISDLSNAQFQESNLTEANLSRVLMSRANFSRAILNKANLSSARLTGVNLSSAQLIRADLRNAILENASLTGADLSEAKLQDADLYAARLGRVIASSTRLSFANLSHTDWQGSDLSGAYLDRTDLRNANLSAARLSNANLQNANLQNANFRNADLSHADLQGANLAGADFQGATLFSGKADPTDQFVQTPTTGSQSAIIKGVDFSQVKNLDTKQLAYICTQGGIHPRCP
>NZ_CP011382.1|WP_035154460.1|3735566_3735905_-|hypothetical-protein
MNPQSEEDLQRRLQELETKINNSFEVVQKQTEKFKFPDAVQRNSLFSGILSKFNQLSTIGKLVSGAIAILITLAILQAVLKLVASAISLAILAGLVYFGYKFFISNSWNGKV
>NZ_CP011382.1|WP_035159128.1|3736565_3737006_+|hypothetical-protein
MKIQSLWKILPTTLIISLGFSSTQAVNAQMVEISANFQPDPMVMSGRSGGNQTSNCGNISSQPSQIIEVKESLPYLRVTLQGSQQSTLLIDGPGGRFCVMPDNYSGKKPEISGFWQAGRYRFYIGELSSGQSDYTLFISQQKSPVK
>NZ_CP011382.1|WP_035154462.1|3737102_3737411_-|DUF1232-domain-containing-protein
MKFSIQSVYTWYRDLLRNPKYRWWVIIGTLLYLVSPIDISPDFLPIVGQLDDVFLLTLLVTEVSQVVIAGFKARKGSVDENEPKETVSASEETVDVDAVSMK
>NZ_CP011382.1|WP_035154463.1|3737619_3738393_+|MotA/TolQ/ExbB-proton-channel-family-protein
MDILDLIQKGGPAMYPLLALSVLSLSVIFERLWFWLRFLNQEREIVDRVLDAAREDWTIARDIAQRATDLPIGRFLYAPLKLPRSDAETFRLALEASAEDEIAGMRRGEKLLEAVIAMAPLLGLLGTVLGLITSLRSIKLGDLGTEAAAGVTTGIGESLITTATGLIVALVSLAFYRLFQGFVVNQVKIFRQAGNNMELLYRQSPPNLSSNVVGEIQPQVILQDRYEDFSSTRKRERNQSPDTSEPPTEPPTAPKNS
>NZ_CP011382.1|WP_035154465.1|3738434_3739043_+|biopolymer-transporter-ExbD
MKINLHTPVEEAQVQIIPLIDVIFCILTFFLLAALQFTRQQAINIDLPKATSGTATVTSNQGNRQILPVTIDAVGQTYVEKQPVQKEQLTEILKKYLQENPQGVLVLNASRSATYNDVVELLDILRQVGGDRVSLGIIPGSSQSTNSSFPTTVPAIPSGTTLPNVPNNINPNLQSVPGQGVNSTNPVTAPVVPSNNNSTPQR

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Crispr_ID: NZ_CP011382_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_12

3817793-3817955

Orphan

Consensus_repeat	Method
GGGCACCCTCCCCGATTTCGAGGAGGGCTGGGGAGGGGTTCTTCTATACGTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_12

>merge|NZ_CP011382|12|3817793-3817955|CRISPRCasFinder
GGGCACCCTCCCCGATTTCGAGGAGGGCTGGGGAGGGGTTCTTCTATACGTCTTTGCAAGAAGTATATAGCGTTTCCCAATCAGATGAAATACAACCCCACCCGCCCTATTGGGCACCCTCCCCGATTTCGGGGAGGGCTGGGGAGGGGTTCTTCTATACGTC

>NZ_CP011382|12|11|3817793-3817955|CRISPRCasFinder
GGGCACCCTCCCCGATTTCGAGGAGGGCTGGGGAGGGGTTCTTCTATACGTC	TTTGCAAGAAGTATATAGCGTTTCCCAATCAGATGAAATACAACCCCACCCGCCCTATT
GGGCACCCTCCCCGATTTCGGGGAGGGCTGGGGAGGGGTTCTTCTATACGTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035154531.1\|3817024_3817564_+\|ATP/GTP-binding-protein	unknown	unknown	gnl\|CDD\|225138
NZ_CP011382.1\|WP_035154540.1\|3822969_3824199_+\|LL-diaminopimelate-aminotransferase	unknown	unknown	gnl\|CDD\|181053
NZ_CP011382.1\|WP_035154534.1\|3819138_3819777_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP011382.1\|WP_144416046.1\|3803883_3804699_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_144416048.1\|3827669_3828479_-\|M15-family-metallopeptidase	unknown	unknown	gnl\|CDD\|350624
NZ_CP011382.1\|WP_035159145.1\|3807346_3807577_+\|antitoxin	unknown	unknown	gnl\|CDD\|226603
NZ_CP011382.1\|WP_035154542.1\|3826202_3827594_+\|malate-dehydrogenase	unknown	unknown	gnl\|CDD\|223358
NZ_CP011382.1\|WP_035154536.1\|3821790_3822144_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154538.1\|3822291_3822468_-\|high-light-inducible-protein	unknown	unknown	gnl\|CDD\|177653
NZ_CP011382.1\|WP_035154528.1\|3807663_3808374_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	unknown	unknown	gnl\|CDD\|223434
NZ_CP011382.1\|WP_035154526.1\|3804763_3805927_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154535.1\|3820031_3821093_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225915
NZ_CP011382.1\|WP_082127342.1\|3814637_3815924_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379138
NZ_CP011382.1\|WP_035154530.1\|3811337_3814544_+\|glycosyl-hydrolase-family-15	unknown	unknown	gnl\|CDD\|366266
NZ_CP011382.1\|WP_035154532.1\|3817979_3818561_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224929
NZ_CP011382.1\|WP_035154541.1\|3824919_3826002_+\|photosystem-II-q(b)-protein	unknown	unknown	gnl\|CDD\|130221
NZ_CP011382.1\|WP_035154529.1\|3808521_3809865_-\|magnesium-transporter	unknown	unknown	gnl\|CDD\|225148
NZ_CP011382.1\|WP_144416111.1\|3810303_3810363_+\|CRISPR-associated-DxTHG-motif-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035154527.1\|3806176_3806962_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224045
NZ_CP011382.1\|WP_035154533.1\|3818603_3819065_+\|hydrocarbon-binding-protein	unknown	unknown	gnl\|CDD\|198057

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035154531.1\|3817024_3817564_+\|ATP/GTP-binding-protein	gnl\|CDD\|225138	COG2229, COG2229, Predicted GTPase [General function prediction only].	5.97357e-48
NZ_CP011382.1\|WP_035154540.1\|3822969_3824199_+\|LL-diaminopimelate-aminotransferase	gnl\|CDD\|181053	PRK07590, PRK07590, L,L-diaminopimelate aminotransferase; Validated.	0
NZ_CP011382.1\|WP_035154534.1\|3819138_3819777_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.57706e-23
NZ_CP011382.1\|WP_144416048.1\|3827669_3828479_-\|M15-family-metallopeptidase	gnl\|CDD\|350624	cd14852, LD-carboxypeptidase, L,D-carboxypeptidase DacB and LdcB, and related proteins. This L,D-carboxypeptidase family includes LdcB LD-Carboxypeptidase from Streptococcus pneumoniae, Bacillus anthracis, and Bacillus subtilis, and L,D-carboxypeptidase DacB from Streptococcus pneumonia and Lactococcus lactis. These enzymes are active against cell-wall-derived tetrapeptides and synthetic tetrapeptides lacking the sugar moiety but are inactive against tetrapeptides terminating in L-alanine. L,D-carboxypeptidase DacB plays a key role in the remodeling of S. pneumoniae peptidoglycan during cell division. It adopts a zinc-dependent carboxypeptidase fold and acts as an L,D-carboxypeptidase towards the tetrapeptide L-Ala-D-iGln-L-Lys-D-Ala of the peptidoglycan stem. This family also includes vanY D-Ala-D-Ala carboxypeptidase which is vancomycin-inducible and penicillin-resistant. VanY hydrolyzes depsipeptide- and D-alanyl-D-alanine-containing peptidoglycan precursors; it is insensitive to beta-lactams. All these enzymes belong to the MEROPS family M15 subfamily B.	1.66756e-53
NZ_CP011382.1\|WP_035159145.1\|3807346_3807577_+\|antitoxin	gnl\|CDD\|226603	COG4118, Phd, Antitoxin of toxin-antitoxin stability system [Cell division and chromosome partitioning].	8.51278e-09
NZ_CP011382.1\|WP_035154542.1\|3826202_3827594_+\|malate-dehydrogenase	gnl\|CDD\|223358	COG0281, SfcA, Malic enzyme [Energy production and conversion].	0
NZ_CP011382.1\|WP_035154528.1\|3807663_3808374_-\|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG	gnl\|CDD\|223434	COG0357, GidB, Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division [Cell envelope biogenesis, outer membrane].	9.97588e-74
NZ_CP011382.1\|WP_035154535.1\|3820031_3821093_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|225915	COG3380, COG3380, Predicted NAD/FAD-dependent oxidoreductase [General function prediction only].	1.29916e-106
NZ_CP011382.1\|WP_082127342.1\|3814637_3815924_-\|hypothetical-protein	gnl\|CDD\|379138	pfam13354, Beta-lactamase2, Beta-lactamase enzyme family. This family is closely related to Beta-lactamase, pfam00144, the serine beta-lactamase-like superfamily, which contains the distantly related pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.58981e-06
NZ_CP011382.1\|WP_035154530.1\|3811337_3814544_+\|glycosyl-hydrolase-family-15	gnl\|CDD\|366266	pfam00723, Glyco_hydro_15, Glycosyl hydrolases family 15. In higher organisms this family is represented by phosphorylase kinase subunits.	1.07729e-67
NZ_CP011382.1\|WP_035154532.1\|3817979_3818561_+\|hypothetical-protein	gnl\|CDD\|224929	COG2018, COG2018, Uncharacterized distant relative of homeotic protein bithoraxoid [General function prediction only].	9.17916e-24
NZ_CP011382.1\|WP_035154541.1\|3824919_3826002_+\|photosystem-II-q(b)-protein	gnl\|CDD\|130221	TIGR01151, Photosystem_QB_protein, photosystem II, DI subunit (also called Q(B)). This model describes the Photosystem II, DI subunit (also called Q(B)) in bacterial and its equivalents in chloroplast of algae and higher plants. Photosystem II is many ways functionally equivalent to bacterial reaction center. At the core of Photosystem II are several light harvesting cofactors including plastoquinones, pheophytins, phyloquinones etc. These cofactors are intimately associated with the polypeptides, which principally including subunits DI, DII, Cyt.b, Cyt.f and iron-sulphur protein. Together they participate in the electron transfer reactions that lead to the net production of the reducting equivalents in the form of NADPH, which are used for reduction of CO2 to carbohydrates(C6H1206). Phosystem II operates during oxygenic photosynthesis and principal electron donor is H2O. Although no structural data is presently available, a huge body of literature exits that describes function using a variety of biochemical and biophysical techniques. [Energy metabolism, Electron transport, Energy metabolism, Photosynthesis].	0
NZ_CP011382.1\|WP_035154529.1\|3808521_3809865_-\|magnesium-transporter	gnl\|CDD\|225148	COG2239, MgtE, Mg/Co/Ni transporter MgtE (contains CBS domain) [Inorganic ion transport and metabolism].	2.783e-142
NZ_CP011382.1\|WP_035154538.1\|3822291_3822468_-\|high-light-inducible-protein	gnl\|CDD\|177653	PLN00014, PLN00014, light-harvesting-like protein 3; Provisional.	0.000836166
NZ_CP011382.1\|WP_035154527.1\|3806176_3806962_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224045	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism].	5.72699e-118
NZ_CP011382.1\|WP_035154533.1\|3818603_3819065_+\|hydrocarbon-binding-protein	gnl\|CDD\|198057	smart00989, V4R, The V4R (vinyl 4 reductase) domain is a predicted small molecular binding domain, that may bind to hydrocarbons.	0.000542088

>NZ_CP011382.1|WP_035154531.1|3817024_3817564_+|ATP/GTP-binding-protein
MEVLRIVIAGGVGAGKTSFIRAISEIEVVDTDQMATDEIAQIKEKTTVALDFGRLTVGKNQSLHLFGTPGQMRFDFMWDILIKKAHAYILLVDAHRPEHIRYGRKILQFMKHRVEIPYLIGITHTDCEGAWELEDVVMALDIRDIKQPPIIAVHAHETESVKQALILLVEYFAECYSIN
>NZ_CP011382.1|WP_082127342.1|3814637_3815924_-|hypothetical-protein
MTKQCEGKKSTVHDMHRATDENIPAFTTTILQPRLDLEKFREYFSPKRFHNIIVLSGIFTTLIFLSLHLSKYTQVSSSPQIAVEENDEVFEEEDGSKTPAVTQRLQAKSSPNSSLVYNVQTPPQLKNGNSKLDAIVKDIVKMADRRNLPTRKLSVTLIDLNDNTISSYQQESPRYPASVVKLFWMVMLESYIQQKIIPATASVNSDLDLMIRKSDNSAAGRIIDRITRTKSTNKKLSAKKFATWRKKRLLVSRFFQRAGYEKINISQKTYPIYYVNHAMPKGADLQLLNDNSNPPIRNRITSYHGARLMYELANKQAVSADDSEKMLKILGRKLHREAWKNNPPVSDGFNPVENFLGEGISRYADEVTFASKAGLTSTCRAEIAYIKTNDGRVRYVLAIFGDDGDYSRSRVFVDISRLVFKRMKQDKE
>NZ_CP011382.1|WP_035154530.1|3811337_3814544_+|glycosyl-hydrolase-family-15
MKTVPLLLNRLDYFYQHIKTIILARQNPITGLLPASTAITAHGDYTDAWVRDNVYSILAVWGLAIAYRKVDADQGRTYELEQSVVKLMRGLLFAMMRQAHKVENFKHTQAPLDALHAKYNTMTGDIVVGDGEWGHLQLDATSIFLLMLAQMTASGCKIIFTLDEVDFVQNLVYYIGRAYRTPDYGIWERGNKINHGNPELNASSVGMAKAALEAMNGLDLFGVNGSAASVIHVLPDEITRARTTLESLLPRESSSKEIDAALLSVISFPAFAVEDIILRERTLNEIITKLAGNYGCKRFLRDGHQTAIEDTNRLHYEPWELKQFEHIECEWPLFFTYLYLDALFSHNSEQIIYYQNKLKSLLVERDGVGLLPELYYVPEENIEAEKLAPQTQPRLPNENIPLVWAQSLYFLGEMLSENLLAVGDIDPLGRHLCIDKRRETLVQIALLAEDEELQAKLEVHGIETQTPKQVEPIQVRKSEELSSIYAQIGKNSKLGLTGRPMRRLRSSATSRVFRIGGETVVFLPSFLDWQQFYLTLDYHFLVDQIRSELAYIHSYWSSLGRPILTLMLTHTLLETGSEALLALMQELQDGVCNGVRVKLGRLNQLILTAATERIDYFPDWQFTQSSVKNAMPRRTFLAFHPEKNWQLAHTQEFQMECETNLNFLLDSLQASANIYEQIELLQTLTRLQGLEFDTGFGGAGYRVSVADLLDEVYAKAGEIGLWGVVRRAAGLRQMVDMGLSDVVTSILVRGKQIAVGKAYSEASLITTPLSHSEIVEKVNNFCREDIRDRVLTQEILIYLSILIRIEPELFKGLLTLRVGYLILLLTSEIAKELRVTQDEAYEHLMRLSPFEVKTRLRQVLAEYAGMSQLLRQQESLHVKQRESDIDWVLQPTLMEEIEVPAGGWRRFRVAEGTTGRVPKDFFKQVWLLMKHCKGLVIGDKLERRNRLDSEVMLAEMTSGEKNFALQVEHLLNKIEAPEYRQVNIETLMELAAIAENNPNLQIEEYIVLDVLIGHAVRLGWLDRNPERGDRYDEDKASAWRSFYNNSPSECASDVMKAFRFLTEFAEQE
>NZ_CP011382.1|WP_144416111.1|3810303_3810363_+|CRISPR-associated-DxTHG-motif-protein
MQIILTITHGIRFMISRIN
>NZ_CP011382.1|WP_035154529.1|3808521_3809865_-|magnesium-transporter
MLIEDVRNSLVDIADLNQLKFDLNQSPPVDVSEYIAKLPQKMQAIAFRLLSKDHATDVFEYLPPDVQEDLINSLHDVQVAQIVEAMSPDERAVLFDELPAGVVKRLLQELSPEQRQATATILGYPEGTAGRVMTTEYVRLREGLTVGEALSKIRRQDEDKESIYYAYVTDDNRKLVRVVSLRQLLFTFPEVLIRDIASDRVIKVKTETSQEEVARAMKRYDLIAMPVVDREDRLVGIITIDDVIDIIEEEATEDIQRLAGVSGDEAALSPPQITIRKRLPWLLGNIGLYIGAASAIAPFQEVIKVVPVLAVIMPILSNTSGNVAIQALSVTVRGLGVGEVTPLDSMKILRKELLAGLGTAIALGSAIGILSLIWAPVDERWVSVVAATVMIVNVFVAASLGTLLPMTLKRLNLDPALISGPLLTTTLDAIGFLTFLSMISIALKIFQ
>NZ_CP011382.1|WP_035154528.1|3807663_3808374_-|16S-rRNA-(guanine(527)-N(7))-methyltransferase-RsmG
MVDIWQQTLNWFPSDIQQQQFQTIYELILQANQQFNLTRITKPEEFWEKHLWDSLVGIKDLLINPQINLSIIDIGTGAGFPGIPIAISLINSNVTLVDSTRKKINFLEQLATTLGLNHVTAITARAEEIGQNYQHRQSYDIALIRAVSTAAVCAEYTLPLLKIGGLGIIYRGNWTEDEAKALEIAVNLLGGEIESIAPLNTPLTNSTRHCLYLRKVKETPAIYPRAIGVPTQKPLS
>NZ_CP011382.1|WP_035159145.1|3807346_3807577_+|antitoxin
MTQISLTEAQQHLPELIANLKPGEEIQICQNERAIARLIIEPRTTRKPRQTGSAIGTFTIIADDEEHLEDFCDYIQ
>NZ_CP011382.1|WP_035154527.1|3806176_3806962_+|ABC-transporter-ATP-binding-protein
MPIIAQNLTGGYTNKQVVKEINLTLETGEWLSLVGANGSGKSTLLKLISRLLKPQQGTVLLDGKAIHSQPAAIVAQKLALLPQQQTIPSGLTVKQLVALGRTPHQPWWQWELDAEDRQQVDTALQLTQMQKFRDRPVEELSGGERQRAFLALALAQNPQVLLLDEPTTYLDIRYQLELLELLKNLNHRQNLTILTVLHDVNLAARYSSRIALLNQGRIFALGKPDYVLTPPNLREVLGVEAVIMQTPVGIQICPLSPWQEP
>NZ_CP011382.1|WP_035154526.1|3804763_3805927_+|hypothetical-protein
MPTLLQAIERQRERGTSFSKPDISLRELQNRFHPEIAGSTRSLIKKMLEGFTGQFSWAVILCRFKGGQGDASVEKFIRQAFTPGLGGLVEYWYDLSLGAVDISNSKVFGWIELGITREEAGGIGRIALVNEAKKAAKNAGIDVETGFFSQIGIFTHDWSRDNIDRNDPNKYKYWIDGSSDGRTVSAPPHGHSGTFLAHEMAHVHGLSHDYGADLKTAYGDPFCIMSAMDVKHFNHPFLNKEFGPALCFPHLIQKGWMYKSRIYHDGGNWLTQPNGITLPLAEVNDLSARANLGIKLAYKSSQGIWDYYLEFARPLNWNQAFDDSYLLIRRILTPSGDRETAAILGNIRLPSVMQVSAEFIEPWGNVRFQVERFDKDGRIVKVTAKKL
>NZ_CP011382.1|WP_144416046.1|3803883_3804699_+|hypothetical-protein
MFGSSDNHRGVRGVSKISTGVNGIAGSPAKIQPDRGCGIHGESVNGFGVCGVSDNHEGVRGASNQGVGVFGSSDQGVGIHGESVNQVGVIGTSQNFVGVWAETKTINHPALIAKGVSKAAVFEGDVEVTGDIRLVNADCAEDFDIICIEQVEPGTVMVIDSEGALRPSDRAYDKRVAGVISGAGSYKPALILDKQESSKNRMPIALMGKVYCKVDASYGAIEVGDLLTTSPTLGHAMKADDPIKAFGALIGKALRPLASGEGLIPILIALQ
>NZ_CP011382.1|WP_035154532.1|3817979_3818561_+|hypothetical-protein
MALSYLLQLLSRVFPQIIQLSQDTSSDAIGVHSSSGSDRDLIEAIAEGGSIKSIVSANSQLFTKFSQENSMINISMLQDELQGFVSGTSDIQGAALVSPDGLALASVLPGGMDEERTAAMSASMLSLGERICRELVRGNVDRIVVEGEKGYGVLVGCGAEAVLLVLAGSGVKQGLLFLEIKRAVSRISPLLAL
>NZ_CP011382.1|WP_035154533.1|3818603_3819065_+|hydrocarbon-binding-protein
MLRQTLGDFSSIVCFKAAITGMEDALGDKATAIALTTSGRSRGKQLAQELNLSIATMSWEDITSKISYALGKDGTRLCIVENIFLEGEKIIVQTSETLCSAGEPQGSERKCTYTLGAIWGAMEQVTGKRLLGKHTESVLRGGNYDVFEFAELK
>NZ_CP011382.1|WP_035154534.1|3819138_3819777_-|tetratricopeptide-repeat-protein
MRNKFQTSSNVICFSILGILTISTIPVSVSAEIASSPKLILAQLSDIEKQERSQLIQQANISYSQGNLPEAEASLRQLIKKFPEDAFGHYQLGNILFRQGKTDDAINAYQEAIRFQSKYALAYNAIGSVYASQERWQEAITQYKKSLEINPNYGDALTNLGQALWQINQKAEAIASLEKALKVYRTQKTEEKAKRVEKMLRQMKSNDDPSVS
>NZ_CP011382.1|WP_035154535.1|3820031_3821093_+|FAD-dependent-oxidoreductase
MTDIIIIGAGMAGLICAQQLQQAGYSVQVIEKSRGLGGRMATRRLHQTWADHGASYIKPQDKLLQDLVDLLCQQQILEVWTDIVHEFPNGVSSPAPRYTAPLGMSAIAKFLSHNLDIRLNQRVTHITLTSQGNWQITTEANDTFISTKAVIFAIPAPQILPILQPLQTDLLGMDFWHHLSSVDFYPSISVMAGYSSQSQPLPDWKAMKFSQDNTLAWIGLDSSKRPQPQQPHFVIQSSVDFAKTYLDALDLQPVGQKILSYAANKLQLPWLNHPEWMQVHRWRYAFPKHPWQNSCLSAATPSPLICCGDWCGGNLIEAAFLSGIAAAATVNQELEKYPLSDNAFLDYLYLLTD
>NZ_CP011382.1|WP_035154536.1|3821790_3822144_+|hypothetical-protein
MKTVINFTQQSVIAEIESILHTYPYKPYQQAFAIPELRQELISYIFNRISCFYNATELEQNCSITYKSPRSPLEHQIHLQSLIQQGIYSIMQEKSDWISHHLCEPTQPGCEPSHWFG
>NZ_CP011382.1|WP_035154538.1|3822291_3822468_-|high-light-inducible-protein
MQDATKVTPVMDDRNSWRWGFTPQAEIWNGRLAMIGFLSAALIELFSGQGFLHFWGIL
>NZ_CP011382.1|WP_035154540.1|3822969_3824199_+|LL-diaminopimelate-aminotransferase
MATINNNYLKLKAGYLFPEIARRVNSFAQAHPEAPIIRLGIGDVTEPLPSACRQAMIQAVEDMGDRSTFKGYGPEQGYEWLREKIAIHDFQSRGCDIDASEIFISDGSKCDTGNILDIFGNDNTIAVTDPVYPVYVDTNVMAGHTGDINDKGEYTGLVYLPISAENNFTAQIPSQKVDLIYLCFPNNPTGATATKEHLTAWVEYAKANNSIIFFDAAYEAFITDPDIPHSIYEIEGARECAIEFRSFSKNAGFTGTRCALTVVPKTLTAKASDGSDVELWKLWNRRQSTKFNGVSYIVQRGAEAVYSEEGKSQTRALINFYMENAQIIRQELTNANLKVYGGVNAPYVWVQTPNGLSSWDFFDKLLHTCNVVGTPGSGFGAAGEGYFRISAFNSRENVLEAMKRIIDKL
>NZ_CP011382.1|WP_035154541.1|3824919_3826002_+|photosystem-II-q(b)-protein
MTTTIRRSEGGNAWSRFCNWITSTSNRIYVGWFGVLMIPCLLAATICFIIAFVAAPPVDIDGIREPVAGSLIYGNNIISGAVIPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFTIGIFCWMGRQWELSYRLGMRPWICVAYSAPVAAATSVFLIYPIGQGSFSDGMPLGISGTFNFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETSETESLNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVVCIWFTALGISTMAFNLNGFNFNQSVLDSQGRVINTWADVLNRANLGMEVMHERNAHNFPLDLAASAEAPVALQAPAIHG
>NZ_CP011382.1|WP_035154542.1|3826202_3827594_+|malate-dehydrogenase
MADLTPNSSFSLTLRLEIPNRIGMLASVTKAIATCGGNLGQIDLIEQTRQVSIRDITVDAASTDHAETVVQAVQALSDIKVINVYDRTFNLHRGGKISITSRIPLKSVSDLAMAYTPGVGRICRAIAQNPEEVYKLTIKQNTVAIVTDGSAVLGLGNLGAAASLPVMEGKAMLFKEFAGIDAFPICLATQDTDEIVKTVKNLAPVFGGVNLEDIAAPRCFEIEERLRRELDIPVFHDDQHGTAIVTLAALFNALKLVHKSMDKIRIVINGAGAAGVAIARLLKKAGAETIIMCDSKGIISISRSDLTEEKKEFAVKAQGSLAGAMQGADVFIGVSAPGVLTPEMVKAMAKEPIVFAMANPIPEIQPELVQNDVAVMATGRSDYPNQINNVLAFPGVFRGALDCRAETITTLMYLEAASAIASLVKPSDLDKEHIVPSVFDERVVTAVAAAVQRAARQEGIARC
>NZ_CP011382.1|WP_144416048.1|3827669_3828479_-|M15-family-metallopeptidase
MQFWKRIPYYLRIIIIATFVASSIIFSGVLWLKLSPAKVAQVVTPQVTASPTTDINALAAVPINNSPVTVNTEIFDTPKVATKDSPQKPPVTVGKQKTSYGHLQYAEANPNQMIIVSSYASGASQRYESLRPEAALSLMKMIYAAREKGVWIIPVSGYRTIAQQQKLFQQQTQRKGSAKEAAKISAPAGYSEHHTGFAVDLADGKSPRLDLAFEFEKTDTYLWLKKHAQEFGFELSFPRNNPQGVSFEPWHWRYVGSPNAGSVFANARR

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Crispr_ID: NZ_CP011382_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_13

4816390-4816472

Orphan

Consensus_repeat	Method
ATGGGGCGAATCCCTGATACAGCCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_13

>merge|NZ_CP011382|13|4816390-4816472|CRISPRCasFinder
ATGGGGCGAATCCCTGATACAGCCAAGGTTTCTGCCACTTCGATTTCACTTGCGGCAATGGGACGAATCCCTGATACAGCCAA

>NZ_CP011382|13|12|4816390-4816472|CRISPRCasFinder
ATGGGGCGAATCCCTGATACAGCCAA	GGTTTCTGCCACTTCGATTTCACTTGCGGCA
ATGGGACGAATCCCTGATACAGCCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035155932.1\|4805977_4806682_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP011382.1\|WP_035155938.1\|4808045_4808393_+\|DUF2499-domain-containing-protein	unknown	unknown	gnl\|CDD\|371197
NZ_CP011382.1\|WP_035155935.1\|4806791_4807832_-\|polysaccharide-pyruvyl-transferase-CsaB	unknown	unknown	gnl\|CDD\|132648
NZ_CP011382.1\|WP_082127364.1\|4820683_4821160_-\|low-molecular-weight-phosphotyrosine-protein-phosphatase	unknown	unknown	gnl\|CDD\|319971
NZ_CP011382.1\|WP_035155978.1\|4825727_4826057_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035155946.1\|4811991_4812972_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP011382.1\|WP_035155967.1\|4822040_4823321_+\|serine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235461
NZ_CP011382.1\|WP_035155961.1\|4819896_4820574_+\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|223777
NZ_CP011382.1\|WP_035155929.1\|4805201_4805822_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP011382.1\|WP_035155949.1\|4813436_4815047_-\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173813
NZ_CP011382.1\|WP_035155969.1\|4823483_4824569_+\|RIP-metalloprotease-RseP	unknown	unknown	gnl\|CDD\|272878
NZ_CP011382.1\|WP_035155975.1\|4825333_4825636_+\|30S-ribosomal-protein-S14	unknown	unknown	gnl\|CDD\|214354
NZ_CP011382.1\|WP_046814874.1\|4818907_4819702_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|372807
NZ_CP011382.1\|WP_035155959.1\|4816899_4818903_+\|excinuclease-ABC-subunit-UvrB	unknown	unknown	gnl\|CDD\|235395
NZ_CP011382.1\|WP_035155943.1\|4810725_4811826_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274009
NZ_CP011382.1\|WP_035155941.1\|4808919_4809693_+\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|179108
NZ_CP011382.1\|WP_035155972.1\|4824544_4825219_+\|endonuclease-III	unknown	unknown	gnl\|CDD\|223255
NZ_CP011382.1\|WP_035155953.1\|4815322_4816030_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|235515
NZ_CP011382.1\|WP_035159361.1\|4808466_4808754_+\|DUF3593-domain-containing-protein	unknown	unknown	gnl\|CDD\|371929
NZ_CP011382.1\|WP_035155964.1\|4821267_4821615_-\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035155932.1\|4805977_4806682_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.13753e-25
NZ_CP011382.1\|WP_035155938.1\|4808045_4808393_+\|DUF2499-domain-containing-protein	gnl\|CDD\|371197	pfam10693, DUF2499, Protein of unknown function (DUF2499). Members of this family are found in plants, lower eukaryotes, and bacteria and the chloroplast where it is annotated as Ycf49 or Ycf49-like. The function is not known though several members are annotated as putative membrane proteins.	9.93149e-45
NZ_CP011382.1\|WP_035155935.1\|4806791_4807832_-\|polysaccharide-pyruvyl-transferase-CsaB	gnl\|CDD\|132648	TIGR03609, S_layer_CsaB, polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395). [Cell envelope, Surface structures, Protein fate, Protein and peptide secretion and trafficking].	1.16535e-145
NZ_CP011382.1\|WP_082127364.1\|4820683_4821160_-\|low-molecular-weight-phosphotyrosine-protein-phosphatase	gnl\|CDD\|319971	cd16343, LMWPTP, Low molecular weight protein tyrosine phosphatase. Low molecular weight protein tyrosine phosphatases (LMW-PTP) are a family of small soluble single-domain enzymes that are characterized by a highly conserved active site motif (V/I)CXGNXCRS and share no sequence similarity with other types of protein tyrosine phosphatases (PTPs). LMW-PTPs play important roles in many biological processes and are widely distributed in prokaryotes and eukaryotes.	4.65664e-67
NZ_CP011382.1\|WP_035155946.1\|4811991_4812972_-\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0.000643664
NZ_CP011382.1\|WP_035155967.1\|4822040_4823321_+\|serine--tRNA-ligase	gnl\|CDD\|235461	PRK05431, PRK05431, seryl-tRNA synthetase; Provisional.	0
NZ_CP011382.1\|WP_035155961.1\|4819896_4820574_+\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|223777	COG0705, COG0705, Membrane associated serine protease [Amino acid transport and metabolism].	8.14556e-37
NZ_CP011382.1\|WP_035155929.1\|4805201_4805822_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	7.88474e-31
NZ_CP011382.1\|WP_035155949.1\|4813436_4815047_-\|S8-family-serine-peptidase	gnl\|CDD\|173813	cd07488, Peptidases_S8_2, Peptidase S8 family domain, uncharacterized subfamily 2. This family is a member of the Peptidases S8 or Subtilases serine endo- and exo-peptidase clan. They have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. The stability of subtilases may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values.	2.59886e-72
NZ_CP011382.1\|WP_035155969.1\|4823483_4824569_+\|RIP-metalloprotease-RseP	gnl\|CDD\|272878	TIGR00054, Putative_zinc_metalloprotease_slr1821, RIP metalloprotease RseP. Members of this nearly universal bacterial protein family are regulated intramembrane proteolysis (RIP) proteases. Older and synonymous gene symbols include yaeL in E. coli, mmpA in Caulobacter crescentus, etc. This family includes a region that hits the PDZ domain, found in a number of proteins targeted to the membrane by binding to a peptide ligand. The N-terminal region of this family contains a perfectly conserved motif HEXGH as found in a number of metalloproteinases, where the Glu is the active site and the His residues coordinate the metal cation. Membership in this family is determined by a match to the full length of the seed alignment; the model also detects fragments as well matches a number of members of the PEPTIDASE FAMILY S2C. The region of match appears not to overlap the active site domain. [Protein fate, Degradation of proteins, peptides, and glycopeptides].	2.8123e-88
NZ_CP011382.1\|WP_035155975.1\|4825333_4825636_+\|30S-ribosomal-protein-S14	gnl\|CDD\|214354	CHL00074, rps14, ribosomal protein S14.	2.34996e-61
NZ_CP011382.1\|WP_046814874.1\|4818907_4819702_+\|hypothetical-protein	gnl\|CDD\|372807	pfam13911, AhpC-TSA_2, AhpC/TSA antioxidant enzyme. This family contains proteins related to alkyl hydro-peroxide reductase (AhpC) and thiol specific antioxidant (TSA).	2.54485e-15
NZ_CP011382.1\|WP_035155959.1\|4816899_4818903_+\|excinuclease-ABC-subunit-UvrB	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0
NZ_CP011382.1\|WP_035155943.1\|4810725_4811826_-\|hypothetical-protein	gnl\|CDD\|274009	TIGR02169, chromosome_segregation_protein_related_ptotein, chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins].	0.000414666
NZ_CP011382.1\|WP_035155941.1\|4808919_4809693_+\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|179108	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated.	7.34684e-141
NZ_CP011382.1\|WP_035155972.1\|4824544_4825219_+\|endonuclease-III	gnl\|CDD\|223255	COG0177, Nth, Predicted EndoIII-related endonuclease [DNA replication, recombination, and repair].	1.93904e-103
NZ_CP011382.1\|WP_035155953.1\|4815322_4816030_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|235515	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated.	4.03069e-144
NZ_CP011382.1\|WP_035159361.1\|4808466_4808754_+\|DUF3593-domain-containing-protein	gnl\|CDD\|371929	pfam12159, DUF3593, Protein of unknown function (DUF3593). This family of proteins is functionally uncharacterized.This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 98 and 228 amino acids in length. There is a conserved LHG sequence motif.	3.72487e-44
NZ_CP011382.1\|WP_035155964.1\|4821267_4821615_-\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	1.25595e-39

>NZ_CP011382.1|WP_035155953.1|4815322_4816030_+|ribulose-phosphate-3-epimerase
MTQTLSQKQIVVAPSILSADFSRLGDEIRAVDAAGADWIHVDVMDGRFVPNITIGPLVVEAIRPVTQKPLDVHLMIVEPERYVADFAKAGADIISVHCEHNASPHLHRTLCQIKELGKQAGVVLNPSTPLNFIEHVLEVCDLILIMSVNPGFGGQSFIPAVVPKIRKLRQMCDERGLNPWIEVDGGLKANNTWQVLEAGANAIVAGSAVFNAPDYAEAVTAIRNSKRPAPELAKV
>NZ_CP011382.1|WP_035155949.1|4813436_4815047_-|S8-family-serine-peptidase
MKKKTVGILFAGLSTVCLSIPGMAARLDSSLDINGIDALKLQRPPYNLTGNKIAIGQVEIGRPGKFGWDKAVSKNRAVSITAVFLRNSPAKSNSGVDSHAFNVAGVMVSKDKAYPGVAPNAKLYSSAVGGIKTGQPEECLSAQHIALQNGGDVRAINFSFGEPLNRDPRPNAVLDGNALLTQCIDWSSRVHNVVYAIAGNQGKGGIPIPTDNYNGINVAFSSRRAGIFSKVDVSNLAASSPAMSQRLAGREINLGARRAIALLAPGNNIRMLNPDGKVNKVTGTSFAAPHVTSIVALLQEYGDRQLRAKKDKWTTDARRQEVMKAVLLNSADKIKDTGDGLRLGMTRTVIDKQNQDWLESDSYKDAKIPLHMQMGAGHLNAFRAYQQFSTGMSNPSLGEVPAIGWDYRTVNANSTVDYSLRQNLRQGSFISITLAWNRLVELNDKNQNGMYDAEESFRDRGLNNLDLYLVAEDGKGTTTACSSISEVDSVEHIFCPVPTTGKYKIRVQFHKQVNEPIQPYALAWWSVPAKSGNSNN
>NZ_CP011382.1|WP_035155946.1|4811991_4812972_-|hypothetical-protein
MSAGVAKDSKQQIMQSFQQILADRKKLESRIATKQEEAEKIKNQEILTTASTYTVDSIIKGLADLQLEFGTIVTSLSEKLATENSKLDELNRAIEIESQNLKDLQQIRVVADTLDILTQEHQEKLNILEQDFASKQETLDKQVTQTRKNWQQEQAIYDAAVKSYDESLVKERQKEAEEYQYKLENTLKITTDAYEAKKRQLERETEESTQEKEKNWQEREKIIQEQKSLLTEYQQKIAKFPTELEESVKKAREEAIKETSQKAKVEADLIEKEWEGTKQSYELRIQALEEAINKQLEQIESISTQLQTALKQAQDLAMRAFENSAK
>NZ_CP011382.1|WP_035155943.1|4810725_4811826_-|hypothetical-protein
MVAKKPNDKNTKAEILQAYEELAKEKAALKSQLDKAAETITQTSSKEKENIRENIKVEPVINMNQRTSVQQKMNATIDSLMKIQLGFGSAASELSEQLTNQASKLSEIRQSVEQEIQELKQLHNLEISEDTLDSLIASYENNSKTFQEEYTQRYEEILQEFQAKVNSWNQEQEIYKTTIQERNDNLNKSRQRDSAEYKYDLELERKLQKDEYEQEQKLLYKQLDEFRENIEKQWTEREKTISDQEKQFAECKAKVEAFPQEKESAVKKATEEGRGIAHYQAKIKSDLFAKEVEGQKRFYEQRLQSLEQTITNQESRIQNLSKQLESALKQVQDLAVKAIEGTSNVNSYQVMKEIALEQAKSQAKAK
>NZ_CP011382.1|WP_035155941.1|4808919_4809693_+|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MEVIPAIDLLEGRCVRLYQGDYAQSQVFSENPAEIAQQWVEQGATRLHLVDLDGAKAGKIVNLAAIETIVQAISVPVEVGGGLRTRESVEQLFNLGVEWAILGTVAVEQPHLVQELCQAFPGKIIVGIDARNGKVATRGWLETSEVLATQLAVQMQELGAAAIIYTDIHRDGTLSGPNMEALQELATAINIPIIASGGVSSVTDLLSLLALENRGVTGAIVGRALYTGDISMREAVRAVGSGRIQDIPPNFDTSTFA
>NZ_CP011382.1|WP_035159361.1|4808466_4808754_+|DUF3593-domain-containing-protein
MNKDALFALSLFPYLGFLWFISRVPQMPRLALYGFYGTLVFVGITIPAGIYAKVAYNDALANIDWLHGSAEVFLTLANILVVLGFRQAVIQTKKN
>NZ_CP011382.1|WP_035155938.1|4808045_4808393_+|DUF2499-domain-containing-protein
MHALSVPTWIIHISSVIEWIAAIWLIWRYGETTNNHAWWALSWGMLPALISAMCACTWHYFDNVPSLEWLVTLQATMTLVGNFTLWAAAFWIWRQSNSPQHLASDNPPANSTQDS
>NZ_CP011382.1|WP_035155935.1|4806791_4807832_-|polysaccharide-pyruvyl-transferase-CsaB
MRALLSGYYGKGNGGDEALLATLLQMLPPNVSPVVLSGNPQETRQRYGVEVCDRMAFLSVMQALQSCDALIWGGGSLIQDATSAISPFYYGGMMTLAQRMGLKTVAWAQGIGPLKRKQTQWLARQTFAHCTQVSVRDRASAGLLHDWNIPYVLAPDPVWALEAKPVPGLWDLPAPRVAVTLRSHPQLTAMRLSQITKALVDFQKATQTFILLLPFQKAQDLSIAQAIHSAFRDVSQVMCLEEPELLKGVFRGVEMAIGMRLHSLIMAASEGCRCFALSYDPKINRLMEDLDIPGWDVSNLPENPDEISTTWVEHYANGNPLSTDKIKFLLDRAFIHKEILEIALNS
>NZ_CP011382.1|WP_035155932.1|4805977_4806682_-|ROK-family-protein
MEENGNIRTLSVDIGGSGVKVIVLDITGNPMTQRARTETPQPAKPDVVMQAITALAATQGEFHRVSVGFPGVVREGITETAVNLDPAWQGFDLATHLSQELQAPVRVINDADMQGLGAISCKGVELVITLGTGFGSALFVNGTLVPNLEMGHHRFRKGETYEEQLGRAALEKIGEKRWNERLNQAIASLQHLFNCDCLYIGGGEAVKVKLNLPANVKIIPNITGLLGGIALWQD
>NZ_CP011382.1|WP_035155929.1|4805201_4805822_+|class-I-SAM-dependent-methyltransferase
MANTSTKQEIINSKKLLFDRWAPSYDWLLPSVFYQAVHQRLLGYVTLPQKSQVMDLGCGTGRLLNRLAGKFADLQGTGLDLSPQMLRIARRSNSHHPRLIFVEGKADALPFASEQFDAVFNTISFLHYPEPEKVLAEIARVLKPGGNFYLVDWTARNDIAPQLMTASGGIKFYSPQTRKAMGETAGLVCTSHHYLISSVLLTVFRK
>NZ_CP011382.1|WP_035155959.1|4816899_4818903_+|excinuclease-ABC-subunit-UvrB
MDKFSLQAPFSPTGDQPQAIAQLLKSVNAGDRYQTLLGATGTGKTFTIASVIEKVGRPTLVLAHNKTLAAQLCNELRDFFPKNAVEYFVSYYDYYQPEAYIPVTDTYIEKTASINEEIDMLRHSATRSLFERRDVIVVASISCIYGLGMPAEYLKAAIPFQVGMEVNYREILKSLVAIQYTRNDLEMTRGRFRVRGDVLEIAPAYEDRIVRVEFFGDEIDAIRYIDPVTGEIIQNLERINLYPARHFVTPVERLEIACNDITAELKEQKTQLETLGKLLEAQRIDQRTRYDIEMLSQVGYCNGVENYSRHLAGRQAGEPPECLIDYFPNDWLLVIDESHVTVPQIRGMYNGDQARKKVLIDHGFRLPSAADNRPLKAEEFWQKVNQCIFVSATPGEWEIEISQDNIAEQIIRPTGVIDPEINVRPTEGQIDDLLGEIKDRVKLQERVLITTLTKRMAEDLTEYLEDNGIRVRYLHSEINSIERIEIIQDLREGKFDVLVGVNLLREGLDLPEVSLVVILDADKEGFLRAERSLIQTIGRAARHIRGKAILYADNLTKSMVKAIDETERRRGIQTAYNQIHGITPQPIAKKKSSNAILSFLEVSRRLNATDLQIVEEHLDEIPLENIPQLITQLESQMKEAAKKLQFEEAAKLRDRIKQLRDKLVGRN
>NZ_CP011382.1|WP_046814874.1|4818907_4819702_+|hypothetical-protein
MNTQTRSNSPDIYSVLSQVQRLRVSDGEMKPFLTDCANNSQLLVLIWSQLGDFDNLEYAWWLGREKEKLEAKGITIRAIGIGDRNSGIKFCEYTGFPQEWLFVDSQAEIHQTLGLYPGLSMQFPLLSTSQKAWLNLILMCAGIASPGTLREVFRGYKGDKKAPQLIADAEVVKGTPLPPIKGAFFKFAGGNGFQRPFELATLRLRNMTEVLSNWNTYVPDSSYLTQRGGTFLFDSQGNLIYEHRDRGILGFAENMSNPLSFLDI
>NZ_CP011382.1|WP_035155961.1|4819896_4820574_+|rhomboid-family-intramembrane-serine-protease
MFPLYDENPTRITPFITYGLIGMNVLIFIHEFSLSAPELETFLDMYAVIPRQLTNDFASEWITLFSSQFLHGGWWHLLSNMLFLWVFGNNIEDRMGHIKYLIFYLICGALAALCQWFIGINSTIPSLGASGAISGVLGAYIIRFPQANIVTLIFLGFFVTTIRISALFIIGFFFIQNVISGVVSLQQAARMTMETGGVAYWAHIGGFVFGILLSPFFGLFRQDDY
>NZ_CP011382.1|WP_082127364.1|4820683_4821160_-|low-molecular-weight-phosphotyrosine-protein-phosphatase
MPQKLLFVCLGNICRSPAAENIMNHLIEQKGLSDEFVCDSAGTSGYHIGSSPDRRMSAAATQKLGIKMRGRARQFDKSDFQEFDLILAMDEDNYRDILYFDSTGQYRHKVKLMCDFCTQHSLKEVPDPYYGGAEGFNLVIDLLVDACTGLLDEMTTQG
>NZ_CP011382.1|WP_035155964.1|4821267_4821615_-|YbaB/EbfC-family-nucleoid-associated-protein
MTGGKGFGGFGLGKMKELAEAFKKAQQVQEGAKRLQEELEQMEIQGEAGGGLVKVIVSGNQEPKRVEISADALGEGVEVLSDLVTAAMKDAYNKSTATMRERMEDLTSGLELPGF
>NZ_CP011382.1|WP_035155967.1|4822040_4823321_+|serine--tRNA-ligase
MLDIKQIRENPQLVQEKLNHRGGNYDIQPLVALNQQQRELEAKRSQLQARSNEIAKQIPEKIKAGSDPKGEEIQALKAEGSSIKAEIATLEPQEKEIVAQISELILAIPNLPSDSTPIGKGEEENVEVRRWGDELIRQDSQVLPHWEIAEKLGILNTERAVKVAQSRFITLIGAGAALERALIQFMLDRQIAAGYIEVSPPILVNTDSLTATGQLPKFAEESFKCADDDLWLIPTAEVPVTNLYRGEIIPGEELPIYHCAYTPCFRREAGSYGRDMRGLIRLHQFNKVELVKFVHPSTSFEELEKLVANAEAILQGLELPYRVIELCTGDIGFSSTKTYDLEVWLPASGKYREISSCSNFVDFQARRADIRFKESGKKGTQFVHTLNGSGLAVGRTMAAILENYQQSDGTVRIPSALQPYLGREIL
>NZ_CP011382.1|WP_035155969.1|4823483_4824569_+|RIP-metalloprotease-RseP
MSVLAAIAVLAVLILVHELGHFIAARSQGIHVNRFSLGFGPVIWKYQGEETEYAVRAFPLGGFVGFPDDDPDCSIPANDPNLLRNRPILDRAIVISAGVIANLIFAYFLLVGQVAFVGIAQATEPGVLIQELAPDASLVATNAGIKAGDIIIAANNQKFGTSLQEIENLRDIIKNNPGNSIQIGILRGSENLTLTVTPEAKANGGSIGIKLSNNGRIVRKAVKNPVEAFNQGATEFQRIITMTFSGFKQLITNFGETASQVAGPVKIVEIGANIAQNDTGSLFYFGALISINLAIINILPLPALDGGQLAFLFIEGLRGKPLPNRIQEGVMQTGLMLLLGLGIFLIVKETTQLQWVQKLFQ
>NZ_CP011382.1|WP_035155972.1|4824544_4825219_+|endonuclease-III
MGTEVISVNSTAKRLTKKQRALEILARLKLLYPDATCSLNYSTPIQLLVATILSAQCTDERVNMVTPALFARFPDAATMAAADLTELETLVRSTGFYRNKAKNIQAACQKIVREFGGEIPPQMELLIQLPGVARKTANVVLAHAFGINAGVTVDTHVKRLTQRLGLTKHTDPVNIEKDLMRLLPQQDWENWSIRLIYHGRAVCKARKPHCDTCQFVDLCPSREY
>NZ_CP011382.1|WP_035155975.1|4825333_4825636_+|30S-ribosomal-protein-S14
MAKKSMIEREKKRAKLVEKYAAKREALLEEFRTAESPLDKLEIHRQIQQLPRNSAPCRRHNRCWLTGRPRGVYRDFGLSRNVLREWAHEGLLPGVVKSSW
>NZ_CP011382.1|WP_035155978.1|4825727_4826057_-|hypothetical-protein
MTEPIPSITLPPAMNPQQESKWLQERLQHWLDTEFLPEAVNETIAERAAQIFKRQRMEGENDLGCLVIAIVTEMQSFDFSKSFYGEFAIANAVSDLLLESLGIDKCCGQ

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Crispr_ID: NZ_CP011382_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_14

5278600-5278700

Unclear

Consensus_repeat	Method
TCAAATGTGAATTGGGGGACAAGGGAGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_14

>merge|NZ_CP011382|14|5278600-5278700|CRISPRCasFinder
TCAAATGTGAATTGGGGGACAAGGGAGACAAGGGAGACAAGGGAGACAAGGGGGACGAGGGGGAAATATCCCTCAAATTTGAATTGGGGGACAAGGGAGAC

>NZ_CP011382|14|13|5278600-5278700|CRISPRCasFinder
TCAAATGTGAATTGGGGGACAAGGGAGAC	AAGGGAGACAAGGGAGACAAGGGGGACGAGGGGGAAATATCCC
TCAAATTTGAATTGGGGGACAAGGGAGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035156776.1\|5289740_5290385_-\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP011382.1\|WP_035156773.1\|5288890_5289676_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225758
NZ_CP011382.1\|WP_035156755.1\|5272393_5273065_-\|DUF2232-domain-containing-protein	unknown	unknown	gnl\|CDD\|226692
NZ_CP011382.1\|WP_035156760.1\|5274542_5278559_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|212673
NZ_CP011382.1\|WP_035156739.1\|5264387_5265182_-\|30S-ribosomal-protein-S2	unknown	unknown	gnl\|CDD\|235396
NZ_CP011382.1\|WP_035156765.1\|5279570_5281826_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|223394
NZ_CP011382.1\|WP_035156769.1\|5283780_5284902_-\|4Fe-4S-ferredoxin	unknown	unknown	gnl\|CDD\|372225
NZ_CP011382.1\|WP_168163518.1\|5266630_5266852_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035156779.1\|5290854_5292186_+\|dihydroorotase	unknown	unknown	gnl\|CDD\|236055
NZ_CP011382.1\|WP_035156744.1\|5267220_5268864_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035156757.1\|5273276_5273975_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP011382.1\|WP_035156767.1\|5281992_5283732_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226372
NZ_CP011382.1\|WP_035156763.1\|5278910_5279273_-\|heterocyst-frequency-control-protein-PatD	unknown	unknown	unknown
NZ_CP011382.1\|WP_035156771.1\|5286752_5288588_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NZ_CP011382.1\|WP_035156753.1\|5271024_5272158_-\|TIGR00303-family-protein	unknown	unknown	gnl\|CDD\|235300
NZ_CP011382.1\|WP_082127468.1\|5265411_5266350_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133042
NZ_CP011382.1\|WP_035156747.1\|5268907_5270071_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270379
NZ_CP011382.1\|WP_046814889.1\|5285130_5286264_-\|PleD-family-two-component-system-response-regulator	unknown	unknown	gnl\|CDD\|226229
NZ_CP011382.1\|WP_035159466.1\|5292418_5293321_+\|DNA-adenine-methylase	unknown	unknown	gnl\|CDD\|273146
NZ_CP011382.1\|WP_035156750.1\|5270589_5270967_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035156773.1\|5288890_5289676_-\|MOSC-domain-containing-protein	gnl\|CDD\|225758	COG3217, COG3217, Uncharacterized Fe-S protein [General function prediction only].	9.05559e-58
NZ_CP011382.1\|WP_046814889.1\|5285130_5286264_-\|PleD-family-two-component-system-response-regulator	gnl\|CDD\|226229	COG3706, PleD, Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms].	6.59802e-108
NZ_CP011382.1\|WP_035156760.1\|5274542_5278559_+\|hypothetical-protein	gnl\|CDD\|212673	cd10231, YegD_like, Escherichia coli YegD, a putative chaperone protein, and related proteins. This bacterial subfamily includes the uncharacterized Escherichia coli YegD. It belongs to the heat shock protein 70 (HSP70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, HSP70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. YegD lacks the SBD. HSP70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Some family members are not chaperones but instead, function as NEFs for their Hsp70 partners, other family members function as both chaperones and NEFs.	9.10669e-06
NZ_CP011382.1\|WP_035156739.1\|5264387_5265182_-\|30S-ribosomal-protein-S2	gnl\|CDD\|235396	PRK05299, rpsB, 30S ribosomal protein S2; Provisional.	2.74e-162
NZ_CP011382.1\|WP_035156765.1\|5279570_5281826_+\|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase	gnl\|CDD\|223394	COG0317, SpoT, Guanosine polyphosphate pyrophosphohydrolases/synthetases [Signal transduction mechanisms / Transcription].	0
NZ_CP011382.1\|WP_035156769.1\|5283780_5284902_-\|4Fe-4S-ferredoxin	gnl\|CDD\|372225	pfam12617, LdpA_C, Iron-Sulfur binding protein C terminal. This domain family is found in bacteria and eukaryotes, and is typically between 179 and 201 amino acids in length. The family is found in association with pfam00037. LdpA (light-dependent period) plays a role in controlling the redox state in cyanobacteria to modulate its. circadian clock. LdpA is a protein with Iron-Sulfur cluster-binding motifs.	1.58048e-113
NZ_CP011382.1\|WP_035156747.1\|5268907_5270071_-\|extracellular-solute-binding-protein	gnl\|CDD\|270379	cd13661, PBP2_PotD_PotF_like_1, The periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold. This group represents the periplasmic binding domain that serves as a primary polyamine receptor of an uncharacterized ABC-type transport system from plants and plant-symbiotic cyanobacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, as well as plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	3.93071e-97
NZ_CP011382.1\|WP_035156779.1\|5290854_5292186_+\|dihydroorotase	gnl\|CDD\|236055	PRK07575, PRK07575, dihydroorotase; Provisional.	0
NZ_CP011382.1\|WP_035156757.1\|5273276_5273975_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	1.12029e-51
NZ_CP011382.1\|WP_035156767.1\|5281992_5283732_-\|AAA-family-ATPase	gnl\|CDD\|226372	COG3854, SpoIIIAA, ncharacterized protein conserved in bacteria [Function unknown].	6.21517e-130
NZ_CP011382.1\|WP_035156771.1\|5286752_5288588_-\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	1.17672e-103
NZ_CP011382.1\|WP_035156753.1\|5271024_5272158_-\|TIGR00303-family-protein	gnl\|CDD\|235300	PRK04447, PRK04447, hypothetical protein; Provisional.	9.72696e-166
NZ_CP011382.1\|WP_082127468.1\|5265411_5266350_-\|glycosyltransferase	gnl\|CDD\|133042	cd06420, GT2_Chondriotin_Pol_N, N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase. Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm to undergo cytokinesis and cell division. Chondroitin is synthesized as proteoglycans, sulfated and secreted to the cell surface or extracellular matrix.	4.27802e-36
NZ_CP011382.1\|WP_035156755.1\|5272393_5273065_-\|DUF2232-domain-containing-protein	gnl\|CDD\|226692	COG4241, COG4241, Predicted membrane protein [Function unknown].	4.55285e-48
NZ_CP011382.1\|WP_035159466.1\|5292418_5293321_+\|DNA-adenine-methylase	gnl\|CDD\|273146	TIGR00571, DNA_adenine_methylase, DNA adenine methylase (dam). All proteins in this family for which functions are known are DNA-adenine methyltransferases. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The DNA adenine methylase (dam) of E. coli and related species is instrumental in distinguishing the newly synthesized strand during DNA replication for methylation-directed mismatch repair. This family includes several phage methylases and a number of different restriction enzyme chromosomal site-specific modification systems. [DNA metabolism, DNA replication, recombination, and repair].	7.86289e-89
NZ_CP011382.1\|WP_035156776.1\|5289740_5290385_-\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	2.11077e-52

>NZ_CP011382.1|WP_035156760.1|5274542_5278559_+|hypothetical-protein
MNVTSRTTEIQTLIADVDRLLSNKRLSRLFPTPEQEVRQTLEHIREFLVQCAAEEQQKSQPSPLLAKLADRGQQQSSSEVTGQMTPGDVLAPLYTEITELLQERANLVAEIRQLEQKRLQNYSLTQQVANQEQLIADFLQVLAHRVGGNVSPQISESRVKSVPGQLLSIEPRGSKSDAALAALESAMNSSSSNSVEASSEALKHLAALTQNLDQRLLALDGTVNVVFEALERNIYTYQESLSQAIAKMYSQGLQGEQILVSLINNLAQELQMQLPSSEPFTIDLRRRTENLVAAPEILGLQAADTTTTQHDVNTHNASIDSNLESPDTAAVVTPTDFEQVVLQWQSESDSSLENAAQDEVEQLYASLFGTEEFTQTETSEKIQQAASVLKEDVQPPENLPTETETSIDDLFPDTTETPENLEVTSTNQVETSIDDLFPETTETSENLEVISTNQVETSIDDWFPETTESSENTQTQLRLDTSDNETVEAIDWQPAPTENIAETELERLILTADSHSSDSPTKILTDSDTNAADPWFDEPDTNLLEVGNVTPTELEPEISTTLELPPTADTVTSLTELLPPISEAELPHPEVAKTPLAAITLDTPPETEEVLNIDNSEAYVIASPQENLLPEIVEAGEEVSNIALDAEHLQQLQDDLANLDENVDGELEVGEETTTPLTEPVKDVTPVPLENEKKKQETSPKGNIPLLSITPPPGKPQETAPKPPESVWYLGIDLGTTGISAALLNRANTEVYPLFWSAENPSENSAKARTFRLPAEVYLPPNAINPQQQSEVAQNPFSAQLKTYLQIALPFKSERQKWEPILQLNEMATIPLVWVVRSLSKLLLTLKADRNSTTLGLTASAVGLNQEAFRQIINDLAGVICTCPAEWTEQYRFNIREALLVSKLVQHPQQVFFLEEAIASLLPELDGGYGETVKFHTYQGAHPVKTTDQPIQGSTLIINIGTAGTEMTLVDLPETLEELTHGDFMLHSFAYAGKGIEQDIICQLLFPEKWRQPRSTSTGGNQTVSSNPWQWQSPIPNLENMRFSSLGLEVLSLPRAGEPDTVERIRLQQQLESSLLGKAVQDAAIALKLILQHQDSFTLELADQRWVLQRRDLESQVFVPFVRRLNRELNKLLVAKGIPTEAINQAILTGGTASLTAVSRWLRQKLPNAKIVQDLYLDENATPCCSRVAYGLCLLPLHPQVLDVPRQQYTDYFLFTELLRLVPEQPLSFGEIIQLFEERGINTRSCQQRLMAFLEGEVPSGLTPSQFNAGWLSQFSRENPEYRAIATAPLFEKQGSLTYQSNPQQLQALRRYIDAIKGSTMQSLEEPYTVNFAIGAIV
>NZ_CP011382.1|WP_035156757.1|5273276_5273975_-|Crp/Fnr-family-transcriptional-regulator
MEDRYNSQTPGNPWMNSVPFFHGFPDNVVEVTLTHLVTRTHPANQVILLENDWGGSVYFIMDGWVKIRTYNLEGKEVTLNILGKGELFGEMAALDEVPRSTDVITLTTTVIGSMPSQDFVKLLNHEPLAGVRLSQLMARRLRQVNRRLRLRESDSQSRVADTLLFLAEGQGKKAQSGTEIPNLPHRELSSLSGLARETVTRVLTRLEKKGLIRRDQDTICIPDVSALERMIV
>NZ_CP011382.1|WP_035156755.1|5272393_5273065_-|DUF2232-domain-containing-protein
MTTEPENLSDNLTQPPIKPNTPLPMVETAFLASTASLIWFINFYFPLGPVLRIFFPIPIALVYLRWGRRAAWMAAITSGLLLTVLMGPTRSMLFVMPFAFMGVLLGYCWCRRTPWLVSMSLSALLGTLGVFFRLWLLSVLSSEDLWVYVINQVSQFTEWVFLKLSILATPSVMWIQIGAIAIILLNNFLYLFVVHLAAWLLLDRLGNPIPRPPRWVQVLMDYE
>NZ_CP011382.1|WP_035156753.1|5271024_5272158_-|TIGR00303-family-protein
MIQIYHQVSLGEAWLNRFQGTTPIFACVLGFTATALIPGISAAGLTPEDRKYTAIADAEFLYYGANHQPKYPLPPLTAGASPVLISRAVVEGCQIPLHIFNAGLPQAPNLPVIDLGGNPAECLTTAAAMPIATVEQLFTQGMLWGERLSQNIRNGYLVIGECVVGGTTTALGILTGLGIDAKDKVNSSHAECNHSQKWTVVQQGLAKIHHLNTTPNPLQLVAAVGDPMQVVVAGMAIAASRSCGVMLAGGTQMLAVYALASAIADFFHLPWQPTAIAIGTTRWVAADSRGNTAKLADSIGQYCLNLHISPPTLLATQLSFAQSQYPQLSAYEAGFVKEGMGAGGAAITASLSYGWQQEQLLIAIEAQMDKLAQISSR
>NZ_CP011382.1|WP_035156750.1|5270589_5270967_+|hypothetical-protein
MEPLQKQVITMGYKLDALYQVIEQLDSKVSQALSSNSLGATHEDRENGLKNSESGRYQLRGHFSINPEMEHKDVLVDGMYPDTTLQGGERSLTPEIQIQRLTAQLTAAYNRIAALEEQLLLKRIH
>NZ_CP011382.1|WP_035156747.1|5268907_5270071_-|extracellular-solute-binding-protein
MHRRYFVQGATALTISQLLVGCSHNNTSKLTVKFLRNSLPGQVVEKFRQSLKSQAKLEFSLEGQLGDIFQQLQNWQEKKEPQAKQGWNLPLGQPEPQVADLVTVGDYWLKSAIEQKLIQPLDVSKLQNWSKLPPKWQNLVRRNEKGEIDSQGKIWGAPYRWGTTVIVYNREKLKSLGIQPQDWDDLWRKELGDRISLLDQPREVIGLTLKKLGKSYNTTKLSTVSNLETELKALHQQTKFYSSTRYLEPLLIGDTWLAVGWSNEVLPFINRYPQFTAFVPKSGTSLWADIWVKPGNPSAQEQKNLAATNLPDQWIDFCWSDNIAQTISLLTRANSPIPVSIDQKNISSALRNVLMADATTLNQSEFILPLAANVSQEYGEFFEKMQA
>NZ_CP011382.1|WP_035156744.1|5267220_5268864_+|hypothetical-protein
MTSFNRSTSRRLKKLTQIPSVWEGDRRPLSSSQTLAPDLDAKGECILWVDGSQGVVRGMDVVSVESGPEAIVRTLMRAMENPHSPAKPARPQRIVVRDREIQFYLRGVLQDLDIAIDYVPELPFIDELFRGFAEILDNQVPELPPQYAQALQEKASAIWQAAPWELLEEQQILSIEINRWDVGTLYASIMGMLGMEYGILLYRSQESLKRFRATILHNEESQGHLEEAFLKQDCLFLTFDSSEDDEDEEDIFDTFPGLGTSELTPTFGNIHPLEGLRSVLYDEEALAVLVALESLYRFIRDHRRQLNEEDFPILSRRYRISLPQTEDDVKTVSVTVATMPELATELEILAGYDEDDEDDWEDDFEALPALRDDLIPEDSFLSVGVISWEMLEFLQTGAGVKYYPAGEITQEGDGLPVILIQTSRPKGKTVIANIEEVGGLQGICFNPGSDPLGGDRYDLGLLQTQNGDLFLFGEFLDDDPIHVEARRKWYQRCQNTQGYCGLIIAKGLTGASRGNPQLKDMMALFEARSLSPQELGLGTLQLMTQFQ
>NZ_CP011382.1|WP_168163518.1|5266630_5266852_-|hypothetical-protein
MQTTSVSLSICNDKADGTSTWCDTPFTIASLRLESPHNENSQYHQFLTDFASLLRFRLSANNFKHTSPDNHQR
>NZ_CP011382.1|WP_082127468.1|5265411_5266350_-|glycosyltransferase
MFFSVVIPTYNRLPILEKCLLALEAQKYQAASVQGYEIVVIDDGSTDGTVEWLATHKEKFPHVHVFQQDHQGAAAARNLGVAKATGDMIIFIDSDLVVTEDFLQAHTNALLAGQANLGNDKFFTYGAVINTCNFNNPTAEPYKITDFSAAFFATGNVAIPKYWLEKAGLFDTGFQLYGWEDLELGVRLKNLGLKLIKCPAAVGYHWHPAFRLEEIPQLIDKEIQRGRMGVLFYQKHPTWEVRMMIQMTWLHRLLWGLLSLNGLLNERTLAPLLGWLINSGKPQLALEIARVFLNWYNVKGVYAAYRESLGNG
>NZ_CP011382.1|WP_035156739.1|5264387_5265182_-|30S-ribosomal-protein-S2
MAVVSLAQMMESGVHFGHQTRRWNPKMDPYIYTARNGVHIIDLVQTAQLMEEAYAYMRSQAEQGKKFLFVGTKRQAAGIIAQEASRCGSHYINQRWLGGMLTNWATIKTRVERLKDLERREETGALDLLPKKEASMLRREMAKLQKYLGGIKTMRKVPDVVVIVDQRREYNAVQECQKLSIPIVSMLDTNCDPDVVDIPIPANDDAIRSIKLIVGKLADAIYEGRHGQLDAEDDYEDYEGAEEEFDYEETELTDSLIPDEEEEE
>NZ_CP011382.1|WP_035156763.1|5278910_5279273_-|heterocyst-frequency-control-protein-PatD
MSSNLQKYHIFATNLEDLRLAIAAQKPDPLALRRSLTSLQQFFQGEIVPLAETDTESPNYSRVQSYRTEMSKQLRLLEMDVMFFQGAKQTVTAATRLQSIADRLSTLIRYCQAVVEMSGE
>NZ_CP011382.1|WP_035156765.1|5279570_5281826_+|bifunctional-(p)ppGpp-synthetase/guanosine-3',5'-bis(diphosphate)-3'-pyrophosphohydrolase
MSSTISTIDITIPDWLQHCLDDSPKECVETEDDRRHNDMDLICKAFVFAYQLHKGQYRKSGEPYICHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVTIEEIEQRFGAEVRRLVEGVTKLSKINFKSKTESQAENFRRMFMAMAQDIRVIVVKLADRLHNMRTMEVMSEESRRRNAQETKDIFAPLANRLGIWRFKWELEDLAFKYLEPESFRQIQQLVAEKRGAREERLTNVIDILKNRLADMGIHCLEISGRPKHLYSIYQKMQRQNKEFHEIYDLAALRLIVETNEECYRALAVVHDVFRPIPGRFKDYIGLPKPNRYQSLHTGVIGPWGRPLEVQIRTMEMHRISEYGIAAHWKYKETGTSHITQMSNADDKFTWLRQLLEWQNDLKDAQEYLDSIKDNLFEDDVYVFTPKGDLVALSAGSTTVDFAYRIHTEVGNHCAGARVNGRMVPLSSRLSNGDIVEVMTQKNSHPSLDWLNFVRTSAAKNRIKQWYKRSRRDENLARGRELLEKELGKTGFENLLKSEPMHTVAEKCNYHSVDDLLAALGYGEITLNLVLNRWREIVKEKEPASGTIPVNIPTSSPKTNKEAAPVRFTDSPIFGVEGLVYHLAGCCTPIPGEPITGVVTRGRGISIHRQGCHNLETVECDRLVPVSWNPGIEYNGRPQSYPVNVQIEALDRVGVLKDILSRLSDQGINVRHANVKTALNQPALIDLGIEIRDRPQLEQVFTQIKKMSDILNIRRVGQIDG
>NZ_CP011382.1|WP_035156767.1|5281992_5283732_-|AAA-family-ATPase
MTITDDLQKLLEILPQDLRQTLEQHPQRDSLVEVVLDLGRRPEARFPHKAEYLSELPVTQDAIDDCIKRVGTFGGDNRAGIEQTLHRISAIRNRSGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVPHPAIGKARRMQVACPEQQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMTERQRWVVHESVADTVDSLLRGHQPTPQVRTVDEEGKVKVVRHLTAINGNGGNRHHAISGEESLMPARQANGWRSSGQMLPLPLTSGDRNPGQVEFDRLLDQSMGFTDSIGFSNSQSAGPNGEDLPLHIYPYGVSRSQLEQVVQVLTLPVVLTKDIDSADAILALRSHVKNHAKLRQMAKARQVPIHMIKASTIPQISRGLRRLLNIDDPDFTDERELQLFLHNGTDDEMDALEEARLAVEQIVIPKGQPVELLPRSASVRKMQHELVEHYRLKSHSFGEEPNRRLRIYPA
>NZ_CP011382.1|WP_035156769.1|5283780_5284902_-|4Fe-4S-ferredoxin
MTELLNPLRSLNKGHWFKLICGASFQHLPAVRSLAIAYTLAGADCIDVAADPAVVAVAYQGLQIAAQIGVEAQRRGFAYSGNLPFLMVSLNDGEDPHFRKAEFDPEQCPPDCHRPCEKVCPAQAIEFAGITNNFSGVIPDKCYGCGRCLPICPYGRIYTSNYVITPGAIAPLILSSGVDAIEIHTQVGRLSEFQRLWQAILPWVGNLKLVAISCPDGAGMIAYLRALYEVISEAIAAHNIALVWQTDGRSMSGDIGDGTTLAAVKLGQKVLTANLPGYVQLAGGTNSYTVAKLRSLGLLAHDKCQPPHISGVAYGSYARVLLSPVLDKLETREVSHTSVKTTVRLEDEPELLWQAVELAHSLVSQLKSQQGVD
>NZ_CP011382.1|WP_046814889.1|5285130_5286264_-|PleD-family-two-component-system-response-regulator
MNQQSANTEKANILIVDDKLDNLRVLSTILTTQGYQVRKALNGQMALIACQTQAPDLILLDINMPDMSGYKVCQHLKSDSQTSEIPIIFISVLDDVIDKVKGMKLGGVDYITKPFQCEEVLARVHNQLVIKNLQNQLQATNSKLLEQNSILRSEIAKRRQVEEALRQANQQLQDLVWSDSLTQVANRRYLDDYLQREWQRSARDKISLAFVLCDIDYFKYYNDTYGHIAGDNCLKQVAHGIQNAVRRPADLVARYGGEEFAVILPNTTLSGAIRVVENIQMYIRDLKIPHRNSPISQYLTLSIGIAAIMPHHQYSPENLIAASDKALYQAKEKGRNLFCAYTAPLQNALVEHNSEEGNIQCGLENMYAFSERQQNVE
>NZ_CP011382.1|WP_035156771.1|5286752_5288588_-|EAL-domain-containing-protein
MNHERLNPEKKDILIIDDTPDNLRVLSSLLTKQGYNVRKALNWQMALIACQTVLPDLILLDIMMPEVDGYEICQRLKSQESTNDIPVIFISALDDVFDKVKAFAVGGVDYITKPFEFEEVLIRIKNQLSLISARQEILELNTQLEIRVRERTFELEKTLHKLQQEINERQHLQNKLLDIVLHDSLTGLPNRVLFIKRLDKALTRAKQEQNYQFAVLFLDCDRFKVVNDSLGHLVGDELLVAIARRLQQFISPFDTLARFSGDEFAILLENITDIKMVTKIADDILKQLYLAFPLSRYEVFMNASIGIILGNKDYEKSEFLLRDADTAMYRAKAMGRARYHVFDPIMHQEALKLLELENDLRRAVERQEFIICYQPIINIKNRDIAGFEALIRWQHPTRGIVPPADFLPVAEETGLMNQINFWVLQSVCETLCQWQKYPEIKQKLKVSVNLSPKIFLQTNFLAKVDQILHDTQVDPRSLDLEITESALMENSDSVKTILKELQARQIKLIMDDFGTGYSSLSYLHSFPMDALKIDKSFVLRMLENQQSLGLVSAMINIAHSMGMGAIAEGVETQEQLAQLQKLNCDFAQGFLFSVAIAPELALDLLLSAPQW
>NZ_CP011382.1|WP_035156773.1|5288890_5289676_-|MOSC-domain-containing-protein
MVSPHLAKIFVYPIKSLDGVELDRVTVLPSGALAHDRELAIADKAGKFVNAKRYAKIHLLRSSFDLNSRTVTLSYPDSPSLQTFHLDRERQSLENYLSLFFGFSVELQANLIQGFPDDTKSPGPTIISSATLTEVASWYPDMSVAEMRRRIRANLEIDGVPAFWEDSLYGEEGSLIPFQVGNVKFLGINPCQRCIVPTRDSFTGEADSQFQKVFVSKRQQTLPPWAINSRFNHYYRLSINTRLASYATVINVTKGEAIEIL
>NZ_CP011382.1|WP_035156776.1|5289740_5290385_-|signal-peptidase-I
MQNQVSDNNSSQKPDNSWIAELGRTIVLSIVLALGIRTFVAEARWIPSGSMEPTLHGSPNQWEADKIIVDKLGYRFSQPRRGDIVVFSPTIELQKEQYNDAFIKRVIGLPGEKVELKDGKVYVNNQPLAEENYLSSSQRTVTDVCQSSSQSAFLAKPVTIPDNSYLVLGDNRGSSYDSRCWGVVPRQNIIGRAVLRFWPINNLGAIDSKSPLYP
>NZ_CP011382.1|WP_035156779.1|5290854_5292186_+|dihydroorotase
MTSSTLLIRGASVILPNGESMLGDVLISDRQIVEIAPEIHPESPTRVIDATGLTLLPGVIDPQVHFREPGLEHKEDLFTASCACAKGGVTSFLEMPNTRPLTTTQAALNDKLQRAASKCLVNYGFFIGATAEHLPDLLTAHPTPGIKVFMGSMHGQLLVDEETTLEPIFAQGKRLIAVHAEDQARINQRRQEFANIHDPAIHSQIQDNQAALQATQLALKLSKKYQRRLHILHMSTAEEAELLRQDKPSWVTAEVTPQHLLLNTDAYAEIGTLAQMNPPLRSPHDNQVLWQALRDGVIDFIATDHAPHTLEEKAQTYPNSPSGMPGVETSLAVMLTAAMAGKCTVPQVVNWMSTAVAKAYGIVNKGAIAPGYDADLVLVDLNTYRPVNRAELLTKCGWSPFEGWSLTGWAEYTIVGGKIVYEKGKLHTDVRGEALDFPLSSSN
>NZ_CP011382.1|WP_035159466.1|5292418_5293321_+|DNA-adenine-methylase
MPKPFLKWAGGKSQLIEQISHFLPEALHRGAIKRYIEPFIGGGAIFFWLAHKYEIQELIISDINTELVVAYRTIQQSVDDLIEILSAIQTQYLSLDDNQRRDYFYQVRQNFNCRRTQIDLRKYNSHWVERTAQLIFLNKTCFNGLFRVNIKGDFNVPSGKYRKPYIFDADNLQAVAQILQRTEILQGDFSQCEKFVDTQTFVYCDPPYRPISNTSNFTAYSQQVFDDDEQLRLRDFFQQLDDRGAFLLLSNSDPKNHNTEDNFFEQAYQDYRIIRVKASRNINSNAAKRNHINELLIMNY

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Crispr_ID: NZ_CP011382_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_15

5769119-5769305

Orphan

Consensus_repeat	Method
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP011382_15

>merge|NZ_CP011382|15|5769119-5769305|CRISPRCasFinder
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACAATTGGATGTAGAGAGTATCATCATCTTCAAAGTCCATCGCCTTTACAAACTATTCCCCTTCACCGGGGATGGAAACGTTTGATTTCCTCCTTTTTGATTTTGTTTTTAGCTCTTCTTTACAAACGATTCCCCTTGTCGGGGATGAAAACA

>NZ_CP011382|15|14|5769119-5769305|CRISPRCasFinder
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	AATTGGATGTAGAGAGTATCATCATCTTCAAAGTCCATCGC
CTTTACAAACTATTCCCCTTCACCGGGGATGGAAAC	GTTTGATTTCCTCCTTTTTGATTTTGTTTTTAGCTCTT
CTTTACAAACGATTCCCCTTGTCGGGGATGAAAACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035157562.1\|5770366_5771377_+\|M28-family-peptidase	unknown	unknown	gnl\|CDD\|349893
NZ_CP011382.1\|WP_035157576.1\|5778801_5779995_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|340848
NZ_CP011382.1\|WP_035157565.1\|5771745_5772873_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035157558.1\|5765949_5768622_+\|ATP-dependent-chaperone-ClpB	unknown	unknown	gnl\|CDD\|274529
NZ_CP011382.1\|WP_035157575.1\|5777972_5778740_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP011382.1\|WP_035159550.1\|5762876_5763263_+\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|319965
NZ_CP011382.1\|WP_052754530.1\|5754163_5757850_+\|response-regulator	unknown	unknown	gnl\|CDD\|274362
NZ_CP011382.1\|WP_035157560.1\|5769477_5770197_-\|CAP-domain-containing-protein	unknown	unknown	gnl\|CDD\|225218
NZ_CP011382.1\|WP_035157570.1\|5773579_5774143_-\|YdcF-family-protein	unknown	unknown	gnl\|CDD\|99750
NZ_CP011382.1\|WP_035159544.1\|5752442_5753474_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176197
NZ_CP011382.1\|WP_035157550.1\|5758856_5759486_+\|chemotaxis-protein-CheB	unknown	unknown	gnl\|CDD\|319752
NZ_CP011382.1\|WP_035157551.1\|5759642_5761730_+\|response-regulator	unknown	unknown	gnl\|CDD\|237951
NZ_CP011382.1\|WP_035157568.1\|5772953_5773538_-\|colanic-acid-biosynthesis-acetyltransferase-WcaF	unknown	unknown	gnl\|CDD\|236703
NZ_CP011382.1\|WP_035157572.1\|5776069_5776894_-\|2OG-Fe(II)-oxygenase	unknown	unknown	gnl\|CDD\|226274
NZ_CP011382.1\|WP_082127446.1\|5774369_5775569_-\|ISAzo13-family-transposase	unknown	unknown	gnl\|CDD\|369439
NZ_CP011382.1\|WP_035157552.1\|5761880_5762720_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035157555.1\|5763661_5765299_+\|iron-uptake-porin	unknown	unknown	gnl\|CDD\|335962
NZ_CP011382.1\|WP_046815059.1\|5777059_5777950_+\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|369777
NZ_CP011382.1\|WP_035159541.1\|5750727_5752323_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|283599
NZ_CP011382.1\|WP_035157549.1\|5757936_5758761_+\|protein-glutamate-O-methyltransferase-CheR	unknown	unknown	gnl\|CDD\|224271

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035159550.1\|5762876_5763263_+\|lactoylglutathione-lyase	gnl\|CDD\|319965	cd16358, GlxI_Ni, Glyoxalase I that uses Ni(++) as cofactor. This family includes Escherichia coil and other prokaryotic glyoxalase I that uses nickel as cofactor. Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic glyoxalase I uses nickel. However, eukaryotic Trypanosomatid parasites also use nickel as a cofactor, which could possibly be explained by acquiring their GLOI gene by horizontal gene transfer. Human glyoxalase I is a two-domain enzyme and it has the structure of a domain-swapped dimer with two active sites located at the dimer interface. In yeast, in various plants, insects and Plasmodia, glyoxalase I is four-domain, possibly the result of a further gene duplication and an additional gene fusing event.	3.04104e-80
NZ_CP011382.1\|WP_035157576.1\|5778801_5779995_-\|glycosyltransferase	gnl\|CDD\|340848	cd03821, GT4_Bme6-like, Brucella melitensis Bme6 and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.	1.20663e-121
NZ_CP011382.1\|WP_035157558.1\|5765949_5768622_+\|ATP-dependent-chaperone-ClpB	gnl\|CDD\|274529	TIGR03346, chaperone_ClpB, ATP-dependent chaperone ClpB. Members of this protein family are the bacterial ATP-dependent chaperone ClpB. This protein belongs to the AAA family, ATPases associated with various cellular activities (pfam00004). This molecular chaperone does not act as a protease, but rather serves to disaggregate misfolded and aggregated proteins. [Protein fate, Protein folding and stabilization].	0
NZ_CP011382.1\|WP_035157575.1\|5777972_5778740_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	1.42649e-62
NZ_CP011382.1\|WP_035157562.1\|5770366_5771377_+\|M28-family-peptidase	gnl\|CDD\|349893	cd05640, M28_like, M28 Zn-peptidase; uncharacterized subfamily. Peptidase family M28 (also called aminopeptidase Y family), uncharacterized subfamily. The M28 family contains aminopeptidases as well as carboxypeptidases. They have co-catalytic zinc ions; each zinc ion is tetrahedrally co-ordinated, with three amino acid ligands plus activated water; one aspartate residue binds both metal ions.	5.40059e-64
NZ_CP011382.1\|WP_052754530.1\|5754163_5757850_+\|response-regulator	gnl\|CDD\|274362	TIGR02956, sensor_protein_TorS, TMAO reductase sytem sensor TorS. This protein, TorS, is part of a regulatory system for the torCAD operon that encodes the pterin molybdenum cofactor-containing enzyme trimethylamine-N-oxide (TMAO) reductase (TorA), a cognate chaperone (TorD), and a penta-haem cytochrome (TorC). TorS works together with the inducer-binding protein TorT and the response regulator TorR. TorS contains histidine kinase ATPase (pfam02518), HAMP (pfam00672), phosphoacceptor (pfam00512), and phosphotransfer (pfam01627) domains and a response regulator receiver domain (pfam00072). [Signal transduction, Two-component systems].	6.4921e-64
NZ_CP011382.1\|WP_035157560.1\|5769477_5770197_-\|CAP-domain-containing-protein	gnl\|CDD\|225218	COG2340, COG2340, Uncharacterized protein with SCP/PR1 domains [Function unknown].	1.57813e-32
NZ_CP011382.1\|WP_035157570.1\|5773579_5774143_-\|YdcF-family-protein	gnl\|CDD\|99750	cd06259, YdcF-like, YdcF-like. YdcF-like is a large family of mainly bacterial proteins, with a few members found in fungi, plants, and archaea. Escherichia coli YdcF has been shown to bind S-adenosyl-L-methionine (AdoMet), but a biochemical function has not been idenitified. The family also includes Escherichia coli sanA and Salmonella typhimurium sfiX, which are involved in vancomycin resistance; sfiX may also be involved in murein synthesis.	2.21629e-19
NZ_CP011382.1\|WP_035159544.1\|5752442_5753474_-\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176197	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	5.39731e-114
NZ_CP011382.1\|WP_035157550.1\|5758856_5759486_+\|chemotaxis-protein-CheB	gnl\|CDD\|319752	cd16433, CheB, Chemotaxis response regulator protein-glutamate methylesterase, CheB. This family contains the methylesterase CheB (EC 3.1.1.61; also known as CheB methylesterase, chemotaxis-specific methylesterase, methyl-accepting chemotaxis protein methyl-esterase, or protein methyl-esterase) domain, a phosphorylation-activated response regulator involved in reversible modification of bacterial chemotaxis receptors. Signaling output of the chemotaxis receptors is modulated by CheB and methyltransferase CheR by controlling the level of receptor methylation. cheR and cheB have a strong preference to occur in the same operon, and a subgroup contains multidomain proteins with CheB-CheR fusions. Reversible methylation of transmembrane chemoreceptors plays an important role in ligand-dependent signaling and cellular adaptation in bacterial chemotaxis. Phosphorylated CheB catalyzes deamidation of specific glutamine residues in the cytoplasmic region of the chemoreceptors and demethylation of specific methyl glutamate residues introduced into the chemoreceptors by CheR.	3.48694e-85
NZ_CP011382.1\|WP_035157551.1\|5759642_5761730_+\|response-regulator	gnl\|CDD\|237951	PRK15347, PRK15347, two component system sensor kinase.	5.62364e-61
NZ_CP011382.1\|WP_035157568.1\|5772953_5773538_-\|colanic-acid-biosynthesis-acetyltransferase-WcaF	gnl\|CDD\|236703	PRK10502, PRK10502, putative acyl transferase; Provisional.	5.42723e-87
NZ_CP011382.1\|WP_035157572.1\|5776069_5776894_-\|2OG-Fe(II)-oxygenase	gnl\|CDD\|226274	COG3751, EGL-9, Predicted proline hydroxylase [Posttranslational modification, protein turnover, chaperones].	6.7861e-43
NZ_CP011382.1\|WP_082127446.1\|5774369_5775569_-\|ISAzo13-family-transposase	gnl\|CDD\|369439	pfam07592, DDE_Tnp_ISAZ013, Rhodopirellula transposase DDE domain. These transposases are found in the planctomycete Rhodopirellula baltica, the cyanobacterium Nostoc, and the Gram-positive bacterium Streptomyces.	7.66957e-113
NZ_CP011382.1\|WP_035157555.1\|5763661_5765299_+\|iron-uptake-porin	gnl\|CDD\|335962	pfam04966, OprB, Carbohydrate-selective porin, OprB family.	2.4495e-08
NZ_CP011382.1\|WP_046815059.1\|5777059_5777950_+\|methyltransferase-domain-containing-protein	gnl\|CDD\|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	1.49981e-23
NZ_CP011382.1\|WP_035159541.1\|5750727_5752323_-\|MFS-transporter	gnl\|CDD\|283599	pfam05977, MFS_3, Transmembrane secretion effector. This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.	1.36225e-174
NZ_CP011382.1\|WP_035157549.1\|5757936_5758761_+\|protein-glutamate-O-methyltransferase-CheR	gnl\|CDD\|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	4.1156e-66

>NZ_CP011382.1|WP_035157558.1|5765949_5768622_+|ATP-dependent-chaperone-ClpB
MQPTDPDKFTDKAWEGIVKSQDIVRAYQQQQLDVEHLILALLQQENGLAPRLLSRAGADASRLQQQLEDFARRQAKVGRSDQLYLGRGLDTMLDFAEEARSRMKDSYISIEHILIAFADDERIGKRTLSTMNVGRIQLEAAIKAVRGSQKVTDQNPESRYEALQKFGRDLTEQARAGKLDPVIGRDDEIRRVIQVLSRRSKNNPVLIGEPGVGKTAIAEALAQRIINGDVPESLKNRQLVSLDIGSLIAGAKYRGEFEDRLKAVLREVTESNGQIVLFIDELHTVVGAGSGQQGAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQQVFVDQPTVENTISILRGLKERYEVHHNVKISDSALVAAATLSARYISDRFLPDKAIDLVDEAAAQLKMEITSKPAELETIDRRLMQLEMEKLSLAGEEKATAQTKERLERIQREISNLTVKQQELTNQWQGEKHILEEISALKQEEEKLRVQIEQAERAYDLNKAAQLKYGKLEGVQREREAKETQLIDLQIQGSTLLREQVTESDIAEIVAKWTGIPVNRLLESERQKLLQLESLLHNRVVGQQEALAAVAAAIRRARAGMKDPSRPIGSFLFMGPTGVGKTELARALAEFLFDSDDALVRLDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLSESIRRRPYSVVLLDEVEKAHPDVFNILLQVLDDGRITDSQGRVVDFRNTVIVMTSNIGSEHILDVSTSDESQYEKMRNRVMDALRSHFRPEFVNRVDDLIIFHPLDRSEMRQIVKIQLKRVESLLSDQKISVDISPAACDYLVEVGYDPVYGARPIKRAIQREVENALATKILENTFIPGDTIIIDRDDNGLNFTKQAKATVAVLEDDSPLVAEVSYE
>NZ_CP011382.1|WP_035157555.1|5763661_5765299_+|iron-uptake-porin
MSVKQCLIHNINAPKKLLVGGLAGCGIVIQICQPSFAESLSHPVTSYTTAQTQIVVSQSEKIPTLEFSPIQIADAFNESNPMSQVTSVGQLVDVKPTDWAYQALRSLMERYGVIGAFPDGKFRGNQPISRYEFAAALAVTFDRIEALIATAISDEYIQEDMKTVQRLRGEFRDALDDLDARIGTTEQLATRLEAEQFSTTTKLQGQVVGAISDGSFANRTIIYRSRLNLTTTFNQKDLLVTQLESGNNGGDAVGRKQQQDFNLLGSVGLFANAGGLDYTDVESDFKLRRLYYTFYPVENIAVTVGAKMSPRDFIDKNRYANNEAFDFSSGLFLNNPLIVQNQVDRYGGAGIAVVWHPQGSKFTLRSLYIAADAARPNFDITEGGLFGDRYQATIEAEYAPNQKLTFRLQYTNALINNTDIHALGVNADYAFNRNLGIFGRFGIGNYQGFNTAINKNLDLQPISWSMGVGIRNLFIPGTLGGVAIGQPFITGGLGNATQTNFEAFYNLALSENITITPIFSLVSNADNDSSHGLVWQTSLRSVFSF
>NZ_CP011382.1|WP_035159550.1|5762876_5763263_+|lactoylglutathione-lyase
MRLLHTMLRVGNLQESLKFYCDVLGMKLLRQKDYPGGEFTLAFVGYGDESDNTVLELTYNWGVEKYDIGNAYGHIALGVDDIYATCEGIKQQGGKVTREPGPMKHGSTVIAFVEDPDGYKVELIQLSK
>NZ_CP011382.1|WP_035157552.1|5761880_5762720_+|hypothetical-protein
MKITLSTVAVFSVISLLTGIVYAVPPKPLPPSAPPQPSSQQTEAFDLSLLVRVGTEFFQSDRYLTESQMIMRGNSQGVDFSAGMQLKTIVQTGKKFRTEIRFTKPGEAPKITGIVTSDGNRVTIYRPDLKQYAVISYSEFDKSDDSFLIGLSSSLFLELPEDSRMAIAQGGLGDKEVLKEIGLLDNPLIKGTRSTTPGENLYIYEYTEPKEAITFRAFIAPATATLNQIQFATKEQNLDIEITEKILSRTPNPTITPQTFKFIPPKTAKRVKTLSVSPF
>NZ_CP011382.1|WP_035157551.1|5759642_5761730_+|response-regulator
MSLQPKVNILLVDDYPENLLALEGVLENLGQNLVRATSGAEALRHLLNQDFAVILLDVQMPEMDGFETATLIRQRERSRYTPIIFLTAFSSSDQMVFKGYSIGAVDYLFKPIDGEILKSKVAAFVELYQKSDQVQHQASQLAAMNAELQQREEMFRSLSVCCPVGIFLTNTNGVCTYTNPRWQAIYGMTYEQSLGDGWSQALHPLDREKVIADWYAVSTVGKDYRGEFRLLLSGGVERWVYAAASPMLGDSGDVTGYVGTVEDITERKQAQEERIQLIAEQAARQEAENANRLKDEFLATLSHELRTPLTSILGWAKLLRQRKLDELAIARALETIERNASVQAQLIEDILDVSRIMRGKLYLNLSPLNLVNIVTTAVENFRLEAEAKNLQLKTFISPPGTFLVSGDTKRLQQVMWNLLSNAVKFTPNGGNIQVRLSAREDQAEIYVIDTGSGISPEFMPHVFERFRQADGSMTRHHGGLGLGLAIARYLVEMHQGSIKAESQGTGQGATFIVKIPLLQSLDNINYQSGIDHILNSRQSSPPSQTNNHHTSEKVPEELLLQGLRVLVVDDDIDTRNFILTALQKSGAEVTAVDSSDSAFTVMQQLIPDVLVSDIGMPGQDGYSLIRQIRNLTPEQGGIIPAIALTGYVREEDINQALAAGFQMYIPKPVEPSILINSVAQLANSLCHSPDNSHTS
>NZ_CP011382.1|WP_035157550.1|5758856_5759486_+|chemotaxis-protein-CheB
MNFKLIVIGTSFGGLEALKILISPLPKTFSIPLAVVIHRHKESDDSLVKILQKNSSLIIKEVEDKEDILPGYVYLAPANYHLLIEKKLHFASKIYPQRDDFLPNIQTYFSLSIDAPVSYARPAIDVLFETAADCYGEKLIAIILTGANQDGVNGMRKIKGRGGLNVVQEPKTALCATMPTAAIAAGITDKILSLTEIPPFLIKMCHQQG
>NZ_CP011382.1|WP_035157549.1|5757936_5758761_+|protein-glutamate-O-methyltransferase-CheR
MNQENLEDIEIELLLESIYRYYGFDFRNYALASLKRRIWNMIHGEGLTTISGLQEKILHEPQYLDKFVFKLSINFTSMFRDPYFFLSFRNKVVPILKTYPFIRIWHAGCSSGEEVYSMAILLMEEGLYHRSRLYATDMNELVLKKAKSGIFPLEFMKDYTHNYIQSGGKTSFSEYYTAGYDSAIFSQELQTNIVFSMHNLATDGSFNEFHVILCRNVLIYFNKQLQNRVHRLFYESLVRFGILALGKQETIKFTDYENEYEQIEIGQKIYRRLA
>NZ_CP011382.1|WP_052754530.1|5754163_5757850_+|response-regulator
MVKNLKIGTKIGASFACGLTVIATLGILAYRTTNNLVESSRWQSHSYEVLNRLDNLISILKDAEIGQRGYLITAEKPYLEPYTKASEEVEKNLQVLQKLTNDNPNQENRLSDLRPLINRRLSIIQETITALDSQGFEAARKIVLTDRGKVVMDEIRSIITQMQQEERTLLAERSRQTQEATNQAINTIIYGIPIAFLLLTIIGIYLTRNISLPLQEVSEAIGKMANGDFASIAIKSDRQDEIGLLVRTFNQMIDNLRHTTQRNQEQNWLKSNLAKFSQMLQGERDLDTAARMILSEMAPLVNAQQGVFYILDNQEDEAVLKLLAGYAYQQRKNLSNRFHLGEGLVGQCALEKQKILLTNVPHDYIHISSGLGETQPVNIIVLPILFENQVIAVLELASLLQFSPIELDFLEQVSDIIGIVINTIYADKRTQELLSASQSLTEQLQSQQLELQESNQRLGQQAYTLQASEELLRQQQHELQQSNEELQQLNAELEEKAELLVQQNQEVERKNQEVETAKQELEEKAAELTLSSKYKSEFLANMSHELRTPLNSLLILAKLLADNSEGNLSNKQVEYGQTIYSAGRDLLMLINDILDLAKIESGTISIDVERLLFTDLIDHLERSFRQIAVEKGVNFTVNIAPEVPMIMYTDGKRLQQILNNLLANSFKFTHQGEISLRVGVAQQGWNPENNSLKNAEKVISFAVSDTGIGIAPEKQKIIFEAFQQADGTTSRKYGGTGLGLSISREIAHLLGGEIQLRSQLGQGSTFTLYLPYTEKENREDSQINPTVEVFPSPANPVNLSVAIADDRQQIQSRDGLYSTVDERTLLIIEDDINFARILLDMAQQQEFKGIVATNGKDGLALAQQYQPSAIILDIRLPEIDGWTVLERLKQDPKTRHIPVHIITAEDSKQRGLQLGAIAYLQKPVSREAIDNAFTRIKDFVDRKVKNLLVVEDDENQRHSIVELIGNSDVLTTAVSTGSEALLAIRNEQFDCLVLDLGLPDINGFELIELIKQEANAATLPIIIYTARELTRAEEIKLRRMAESIIIKDGRSPILGSSFSLSTRASNPSPERLLDETALFLHRVQANLPTSKRRILEQLHSSDTVFVNKKILIVDDDVRNIFALTSLLERKQMQVFYAENGRDGIEILENHPDMNIILMDVMMPEMDGYETTRTIRGNPLFKSLPIIALTAKAMQGDKEKCITAGASDYITKPVDNEKLLSLLRVWLYT
>NZ_CP011382.1|WP_035159544.1|5752442_5753474_-|alcohol-dehydrogenase-catalytic-domain-containing-protein
MLAALLYGQEDLRLENVADPTADVGEVIIQVGTATTCGTDLKVWRRGGHAKMLKPPTLFGHEAAGKIVAIGAGVQGWQVGDRVVANNSAPCMQCFFCQHQEYSLCPHLTWNNGTFAEYLKIPAPIVEHNLLPIPDNLPDELAAMTEPLACVLHGVARGNVKPGDRVVVIGDGAIGLMFVAKLAHDCGVEVTLFGGSNSRLAIGEKLGATRTYNHRQISSIPATVREFTDGWGADVVVEATGVPSVWETAIACARPGATVNLFGGCPRDTTITVNTEQLHYSELTLKGVFHNTPQYVRAALDLIASRKIPFELLVSEQRPLQDLEQVFCDMRDRKVIKVGIVPG
>NZ_CP011382.1|WP_035159541.1|5750727_5752323_-|MFS-transporter
MWSPLRQPVFRALWVASAVSSIGTWMHDVGATWLMTSLSPSPFLVALMQAASSLPFFLLALPAGAIADVVDRRKMLLFTQGFMLCIATLLGILTVLGITTPWVLLGLTFAMSIGSSMNMPVWQAVTPELVSKEDLPQAVTLSGIIINLSRSIGPAIAGIIIAASNTGTVFLLNATSFVGVILVIYNWRYTQQKTALPAERFIGAIQAGVRYVRYAPQLQTVLIRTAAYIIFGSALFALLPLLGRRELKLDAFGYGVILGFWGIGGLAGAFILPKFRNRFSIDQIVAGSSLLMGGMMLAIANTRNIYLVCSLMLLVGIASLGVMVSLNVSVQNAVPSWIRARAFAVQLLVFQGSMTVGSLLWGAIAQQTSITISLSSAAIGLILFVFVTARYRLSCAEKLDLTSSFHWVEPTRTFEPCPNDGPVLITLEYLIHPANANEFTQAMKTLSQIRRRDGAFYWGIYQDLSQPGRFVETIVVESWAEHQRQFARVTNADRQIEEKARSFHIGEQPPKVSQMLYANYTDNQGLRQPCQ
>NZ_CP011382.1|WP_035157560.1|5769477_5770197_-|CAP-domain-containing-protein
MRQRSLWFFFPAALLLSHIFPFWQTNQALAKSTSDADFNIVSANPHIIATANYLSPIEQEVIEEMNKVRTNPKSYIPILESYRKRFQGKRVRMGNNTFLVTQEGVKAVNEAIAFLKKVRPVGALNTSKGMSLGAKDHVRDQGTRGVVGHNGTDGSNPSTRIQRYGDWQKTAGENISYGPKTAQDIVMQLIIDDGVRDRGHRKNIFNRNFKIAGVAFGRHSRYGVMCVITYAGGYREKMN
>NZ_CP011382.1|WP_035157562.1|5770366_5771377_+|M28-family-peptidase
MQKCLWRLFLMLIVVTTVAITLIWGQTKISPSAVNPHTHPPALPPQSVSKFPQVSSQGLFNHVERLNFRRYTPEERSRTRKYIIQQLQKFGWQAQLQRFDTGINIVATKPGTDTQAGKILIAAHYDTVEVSPGADDNSSGIAVLLEIARLYKNQPTIRTLELAFFDQEEAGLLGSKAFTTEKQNLDSLQAVIVMDMIGYACYTDSCQQYPTSLLISPPSKYGDFIAVVGDTEHLPLLNSFNHISTEKLPPVFTLPVPLKGLLSPDTLRSDHAPFWVQGIGAVLITDTANLRTPYYHQSTDIPANINQKFFTGVAQIVVNVTTEILNHRDSFKTPQT
>NZ_CP011382.1|WP_035157565.1|5771745_5772873_+|hypothetical-protein
MSANLQKLTPQQIAQIPIYQQKWRNVALSTAEIDREKTIDAINLAYDFCGLEQPQVVFSKSPYSAMNKVLPELESLIQNSVSYKVKHLFNQAWNLFAQQSAHSNQQQNLKRPSEISIHLHTTFYFKFIEYMKVAQEQLQIDLAEVLELKLDVNLAGLFHSLQEQLQEKYDSNFIPGVNFCSYASWLDFWSSEFNYTGDKDFIHLVKILATSCPWIFPYQKVVVVCDRPRKISFNSEQRLHSEGEPAIEFADGYRVYAYSGVILPDKYGVTHPHQWQPHWLLTETNAEVRRVLMQGIGYARIMQELQATELDNYREYTLLKVNSQIDIEPIYLLKMHCPSTGLIHVLRVPPNTKSAKEAITWVNWGIAPEDFVLQT
>NZ_CP011382.1|WP_035157568.1|5772953_5773538_-|colanic-acid-biosynthesis-acetyltransferase-WcaF
MRLDSYKVGNYTTGATYGKQLLWYFLGFPLVKSYLLPFSGFKVRILRFFGAKIGQGVRIKPGVKVKFPWRLNLGDYVWIGENTWIDNLAPVIVESHVCISQGVYLCTGNHDWSNSNFQLITAPIHIQEGSWIAAKSVIGPGVTVGKGAILSLGSVTGKSLEPMMIYTGNPAKIMKKRSIITDNLNLTQEEISSI
>NZ_CP011382.1|WP_035157570.1|5773579_5774143_-|YdcF-family-protein
MKQCYLLWRKYYSLTLISLFLSLVLIIPFKIAIAIHQVPLPQAFLVLGGDPNRETYAAQLAQWYPNLDIWVSSGPNDVQTKNTFVSSNILREKLHIDNRAVDSVTNFTTLVSDFKRHKIQHLYLITSDYHMSRAKAIATLVLGSHGIAFTPLSVPSDRHTPESNLRIIRDMTRSVLWIFTGYTGAKI
>NZ_CP011382.1|WP_082127446.1|5774369_5775569_-|ISAzo13-family-transposase
MQLTENLKSLYIKTAKKLKGSDRRQFMAEVVKGLGIGGQTLVERELGWNRRTIRKGMQELESGQPFIDGFERSGRRRVETKLPNLLSDIKSLVDPQSQTDPSFKSIRLYTRMTASEVRRQLIEQCGYSDEELPSSETIRRRLNDLGYTLKRVLKTKPTKKIPETEAIFEQVEQINTEADNDPHTLRISIDAKVAVKVGEFDRGGKTRVPTISLDHDFAPETTLIPYGIFLPEYNELFLFFVSSKLTADCIVDIVESWWQSIKHRFTHIQKLVINQDNGPENHSRRTQFMKRIIDFATSSKLSLQLAYYPPYHSKYNPVERCFGWLEQHWNGSLVDTVEAVLNFAKTLTFKGQNPVVTLVEKVYSTGVKLTNKAMAEVEKQIYRLPNLRKWFVEVFAKPA
>NZ_CP011382.1|WP_035157572.1|5776069_5776894_-|2OG-Fe(II)-oxygenase
MYLDNATLNNRYVESLLSKLEYHKLELHKEFKIPQRINSCYLDNLLDEEDTRKIYASFPEHQEMLLLKDLREYKYVGIQLNKYHPILSKIIYAFQDRRVVKIISEITGIKNLFADEYLYAAGFSLMKKDCFLNPHLDNSHDKDRDRYRVLNLLYYVTPDWHQEYGGNLELWDRGLKQPCRTIHSKFNRLVIMVTNKSSLHSVSKIDYPGQRCCVSNYYFSPQPVDDHEYFHVTSFRGRPKEKVRDLILQGDAILRNGIRKIFKHGIKKPHFYRK
>NZ_CP011382.1|WP_046815059.1|5777059_5777950_+|methyltransferase-domain-containing-protein
MCFNQPKNLANIMLDIKAINAWKQGVLICKIKEYTPAIEANSYYFSHPDWGKNYFEACHRDQKFIELWQAVINRWDEKIVVDIGCGPGNIYASLKEACGEPSELIGVDVSLGALKMAKEIGYTPVLADAHDLPFISEFADIVMLNACLHHCDDMAKVLAEAARLVRPGGLLITDHDPQFTAYNFRGLGLLLWQARLPLYRFLKRGGHTSAEEQFWGLAAEVHHKPGKGITPQMYNDVLKPLGFKVNLYPHSHKVGAEVLEGNYGKLFGKCRLAQQLSGINPDTPQAALSLMCVASR
>NZ_CP011382.1|WP_035157575.1|5777972_5778740_-|glycosyltransferase-family-2-protein
MLEDVTVLILTYNEAPNIERTLQKLNWANQIVIIDSFSTDKTLEILALYPQIKTFQRKFDTHAIQWNYGLEQVTSEWVLSLDADYVLSDELISEIQELSDDSAIDGYFSRFKYCVFAQPLHGTILPPRQVLFRKNKSIYIDDGHTQLLELKGKSAMLKSYIYHDDRKPLSRWLWAQDRYLVIEAKKLQELSVHQLSWSDRIRKQTILAPLLVLLYCLIIKGGILDGWRGWYYAFQRTLVEIILAIRLIEIKISDT
>NZ_CP011382.1|WP_035157576.1|5778801_5779995_-|glycosyltransferase
MRVLHVIPSVPKVRGGTSQAVLDMVKALRANNIEAEIATTNDNGDDLLDVPLQKQIEYENVPICFFHRFSPNAKAVREYAFSWQLTVWLWQNISQYNLIHVHALFSYPSTIAMAIARLQNIPYVVTPHGLLCEWSLEQSTRKKQIYSKIIEKSNLNHSQAIHFTSQKEQQEVSKLGLNVPGFVIPLGLSIPDPIPDAYSRLRQLHHISASEPVILFLSRLHHKKGLDYLIPALSKVSHHCFTFILAGSGTSDYEAEIESLLVSNGLRDRTRIVGFVTGESKDILMQGSDLFILTSHSENFAVSVLESLAVGLPVLVTPGVALASIVQENQLGYVPDMDVLAISNALEDYLNNTHIAKNMGVNAREFVLEKYTWDKVAGKMQAVYQQILQHQSITECN

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Crispr_ID: NZ_CP011382_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_16

5895199-5895311

Orphan

I-D,II-B

Consensus_repeat	Method
CATTGCAATTAAAACTAATCCCTATTAGGGATTGAAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP011382_16

>merge|NZ_CP011382|16|5895199-5895311|CRISPRCasFinder
CATTGCAATTAAAACTAATCCCTATTAGGGATTGAAACTGCACTCCGACATCGTTAAAACCTTTTATTAAACCTGCATTGCAATTAAAACTAATCCCTATTAGGGATTGAAAC

>NZ_CP011382|16|15|5895199-5895311|CRISPRCasFinder
CATTGCAATTAAAACTAATCCCTATTAGGGATTGAAAC	TGCACTCCGACATCGTTAAAACCTTTTATTAAACCTG
CATTGCAATTAAAACTAATCCCTATTAGGGATTGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035159585.1\|5898153_5899710_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|226651
NZ_CP011382.1\|WP_035157802.1\|5895344_5896235_-\|rhodanese-related-sulfurtransferase	unknown	unknown	gnl\|CDD\|223982
NZ_CP011382.1\|WP_035157796.1\|5893454_5894330_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|237636
NZ_CP011382.1\|WP_035157820.1\|5904119_5904896_-\|enoyl-ACP-reductase-FabI	unknown	unknown	gnl\|CDD\|180949
NZ_CP011382.1\|WP_035157806.1\|5896694_5897774_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226359
NZ_CP011382.1\|WP_035157817.1\|5903334_5903964_-\|imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|234873
NZ_CP011382.1\|WP_035157778.1\|5886487_5887360_-\|S-methyl-5'-thioadenosine-phosphorylase	unknown	unknown	gnl\|CDD\|180977
NZ_CP011382.1\|WP_035157776.1\|5884916_5886428_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|225885
NZ_CP011382.1\|WP_035157793.1\|5892346_5893273_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|223220
NZ_CP011382.1\|WP_035157784.1\|5889750_5890878_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035157799.1\|5894540_5894921_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_046814916.1\|5887507_5888821_-\|peptidoglycan-binding-protein	unknown	unknown	gnl\|CDD\|225943
NZ_CP011382.1\|WP_035157804.1\|5896296_5896671_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035157781.1\|5889241_5889427_-\|CopG-family-transcriptional-regulator	unknown	unknown	unknown
NZ_CP011382.1\|WP_035157810.1\|5902261_5903239_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP011382.1\|WP_035157825.1\|5906684_5908172_+\|DUF3084-domain-containing-protein	unknown	unknown	gnl\|CDD\|226809
NZ_CP011382.1\|WP_035157787.1\|5891330_5891534_+\|heavy-metal-associated-domain-containing-protein	unknown	unknown	gnl\|CDD\|225328
NZ_CP011382.1\|WP_035157807.1\|5900207_5901671_-\|polysaccharide-export-protein	unknown	unknown	gnl\|CDD\|224512
NZ_CP011382.1\|WP_035157790.1\|5891631_5892087_-\|divergent-PAP2-family-protein	unknown	unknown	gnl\|CDD\|224874
NZ_CP011382.1\|WP_035157823.1\|5905716_5906388_+\|global-nitrogen-regulator-NtcA	unknown	unknown	gnl\|CDD\|163409

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035159585.1\|5898153_5899710_-\|alpha/beta-hydrolase	gnl\|CDD\|226651	COG4188, COG4188, Predicted dienelactone hydrolase [General function prediction only].	2.41686e-64
NZ_CP011382.1\|WP_035157802.1\|5895344_5896235_-\|rhodanese-related-sulfurtransferase	gnl\|CDD\|223982	COG1054, COG1054, Predicted sulfurtransferase [General function prediction only].	4.64976e-151
NZ_CP011382.1\|WP_035157796.1\|5893454_5894330_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|237636	PRK14186, PRK14186, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	1.49113e-178
NZ_CP011382.1\|WP_035157806.1\|5896694_5897774_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226359	COG3839, MalK, ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism].	6.86757e-166
NZ_CP011382.1\|WP_035157817.1\|5903334_5903964_-\|imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|234873	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB.	4.28083e-129
NZ_CP011382.1\|WP_035157807.1\|5900207_5901671_-\|polysaccharide-export-protein	gnl\|CDD\|224512	COG1596, Wza, Periplasmic protein involved in polysaccharide export, contains SLBB domain of b-grasp fold [Cell wall/membrane/envelope biogenesis].	1.27646e-38
NZ_CP011382.1\|WP_035157776.1\|5884916_5886428_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|225885	COG3349, COG3349, Uncharacterized conserved protein [Function unknown].	5.772e-152
NZ_CP011382.1\|WP_035157793.1\|5892346_5893273_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|223220	COG0142, IspA, Geranylgeranyl pyrophosphate synthase [Coenzyme metabolism].	2.36034e-95
NZ_CP011382.1\|WP_035157787.1\|5891330_5891534_+\|heavy-metal-associated-domain-containing-protein	gnl\|CDD\|225328	COG2608, CopZ, Copper chaperone [Inorganic ion transport and metabolism].	1.76692e-08
NZ_CP011382.1\|WP_046814916.1\|5887507_5888821_-\|peptidoglycan-binding-protein	gnl\|CDD\|225943	COG3409, COG3409, Putative peptidoglycan-binding domain-containing protein [Cell envelope biogenesis, outer membrane].	1.3399e-20
NZ_CP011382.1\|WP_035157823.1\|5905716_5906388_+\|global-nitrogen-regulator-NtcA	gnl\|CDD\|163409	TIGR03697, NtcA_cyano, global nitrogen regulator NtcA, cyanobacterial. Members of this protein family, found in the cyanobacteria, are the global nitrogen regulator NtcA. This DNA-binding transcriptional regulator is required for expressing many different ammonia-repressible genes. The consensus NtcA-binding site is G T A N(8)T A C. [Regulatory functions, DNA interactions].	4.58996e-126
NZ_CP011382.1\|WP_035157810.1\|5902261_5903239_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	5.67753e-92
NZ_CP011382.1\|WP_035157820.1\|5904119_5904896_-\|enoyl-ACP-reductase-FabI	gnl\|CDD\|180949	PRK07370, PRK07370, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP011382.1\|WP_035157778.1\|5886487_5887360_-\|S-methyl-5'-thioadenosine-phosphorylase	gnl\|CDD\|180977	PRK07432, PRK07432, S-methyl-5'-thioadenosine phosphorylase.	0
NZ_CP011382.1\|WP_035157790.1\|5891631_5892087_-\|divergent-PAP2-family-protein	gnl\|CDD\|224874	COG1963, COG1963, Uncharacterized protein conserved in bacteria [Function unknown].	6.70468e-70
NZ_CP011382.1\|WP_035157825.1\|5906684_5908172_+\|DUF3084-domain-containing-protein	gnl\|CDD\|226809	COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown].	9.05026e-111

>NZ_CP011382.1|WP_035157799.1|5894540_5894921_+|hypothetical-protein
MWKKKNFYWSFPGVSLGCLFLLVMGLNGCGGIKTMSVTGANTTAIRELATKVKVGDTVYVQGKVEKKAPLIKQAAYEINDSTGKIWVVTNQTQLKPGEEVVIKGKLRYQSIPLGGKEYGDMYVEEY
>NZ_CP011382.1|WP_035157796.1|5893454_5894330_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
METKTAKLLDGKALASQIHQELTTKIQELQTQIARPPGLAVLMVGDNPASAAYVRNKEKACQLVGIASYGQHFPQDTTQAELEAVIHELNQDSRVDGILVQLPLPSHLDAVALLHEIHPDKDADGLHAVNLGRLVRGEPGLRSCTPFGVMRLLQEYNIPLRGKQAVVVGRSILVGKPMALMLLAADATVTIAHSHTQNLGAIAKNADILIAATGIPGMITGDMVKPGAVVVDVGINRITDSQGKSRLVGDVDFDSVAPVADYLTPVPGGVGPMTVAILLQNTVKSYQKSQE
>NZ_CP011382.1|WP_035157793.1|5892346_5893273_-|polyprenyl-synthetase-family-protein
MVAADNLKITSESPTFELISYLKERQKLCEKALDIAVPLGYPDKIYESMRYSLLAGGKRIRPILCLATCEMLGGSVDMAMPTACAMEIIHTMSLIHDDLPAMDNDDYRRGKLTNHKVYGENIAILAGDALLAFAFEHIAAKTQQVPAERVLKVVAHLAKACGADGLVGGQVVDLESEGKTDTSLETLDYIHTHKTGALLEACVVCGGVIAGASPENLQRLSTYAKNIGLAFQIIDDILDITATQEQLGKTAGKDLQAQKVTYPSLWGIEESQKQAQKLIDAACEELAPFGEAAKPLIALAHFITSRNH
>NZ_CP011382.1|WP_035157790.1|5891631_5892087_-|divergent-PAP2-family-protein
MQDIGNILDNRVLVVALVACFMAQALKLVIELVKNRKLNINVLVTTGGMPSAHSALVTALAAGVGQNIGWASPEFALATVFAIIVMYDAAGVRQAAGKQARILNQMIDELFHEHPEFSGDRLKELLGHTPFQVIAGSALGIAIAWLARYAY
>NZ_CP011382.1|WP_035157787.1|5891330_5891534_+|heavy-metal-associated-domain-containing-protein
MTRLTIKVPDMACSACAEKITQAIKLVDVAAMVEADTQTKVVSVETNSSETTVREAIAQAGYTPIGV
>NZ_CP011382.1|WP_035157784.1|5889750_5890878_-|hypothetical-protein
MKDIGDHRNRDFFDVENDLAVNHLAQQWAKKYLHSIKSNKSYEIENDAQTLADVASPLQRKKTAKKLLNFLSSATFQAWNQTNALLSEEIKRHNIDTQLINPWEIAAEASKIYSQALDIYGQQIFPKTSDSQWNLIYTNKCSTAEMEEVESQNINSNQLSTIISPQLGMLRQKYTQKDPKVIGVVCVMFHYTSQMLLQTLSPWEQVLVGGYFKVIDDHLYIPLQRAYKAATVHDKTSPALAAVQTLLPISTQIAKKISQKIIELNPHYYSLSGSLNDSPVKTSSIRDVEMFQVYLWICTLEGSVAAIQQELFPLCVMLYPKLNIQWHIVRQMLQLLEQEISQQLNSEQFYTLLPYLHVLWQMFSPQVFEEFDFLN
>NZ_CP011382.1|WP_035157781.1|5889241_5889427_-|CopG-family-transcriptional-regulator
MTNKKWAVKRITVNLATQEAEKLEHYCQQTGRPATDVIRELIRGLPTSHDSARDVVVQEIT
>NZ_CP011382.1|WP_046814916.1|5887507_5888821_-|peptidoglycan-binding-protein
MKTPESVEIIPLDSKLFSEWNWQKLSSLVWLRFLPVAVAIATFSTAGAAFALQKGENSQQVKNVQSCLKQLGYFSGPVNGNFGSLTENAVKRFQQANRLPAIGIVGPQTQQALNRLCQRAQNPNVMQLGSRGAGVTQLQQDLGRLGFFRGPNTGYFGTETQQAVIRFQQSRGLVADGIVANGTLNAIRVSLRKSPNDGMGGDTLPNALNEGDSGSEVINLQRALRKLGYFNANPTGKFGILTKEAVARFQQANRLPVDGIADGETLQAIYQAVDAGQDNCTATRGDICLGENSQRVVAVQQRLRQWGFYNGNINGYFGAATRDAIAQFQRSSNLNPTGYVDFSTWQALRLNSNISDNPSNPNPINDDSNRENRYVVVIPMSHSQTLDMVRRYVPDAFSTTSRLGNYVNAGEFSDRTAAERRSRLLRERGFDARVDYL
>NZ_CP011382.1|WP_035157778.1|5886487_5887360_-|S-methyl-5'-thioadenosine-phosphorylase
MAQARIGIIGGSGLYKMDALKDVQEVQLETPFGSPSDAIILGTIDGTQVAFLARHGRNHTLTPSELPFRANIHAMKQLGVEYLISASAVGSLKEEAKPLDMVVPDQFIDRTKNRVSTFFGEGIVAHIAFGEPICRHLAGILTEAIASLNLPDVTLHEGGTYVCMEGPAFSTKAESNLYRSWGATVIGMTNLPEAKLAREAEIAYATLALVTDYDCWHSDHDSVTVDMVIANLQRNAINAQKVIQETVRRLAANPPVSDAHSALKYAILTNLEKAPAATKSKLQLLLQKYL
>NZ_CP011382.1|WP_035157776.1|5884916_5886428_+|FAD-dependent-oxidoreductase
MTQFSQGKKVVVVGAGWAGLSATYSLAKQGYDVTLLEAGSYPGGLVAGWRTPGGRAVEAGIHGFWYPYRNIFALINELGINPFTSWTRSSQYSPAGLEVESPIFQDLPRLPSPLGTFLYTKFQRLPLSDRLSALPLLYAVVDFDNSDAAWQRYDSVTARELFKTFAVSARLYREAFEPMLLVGLFAPGEQCSAAATIGMLYYFILAHQADFDVVWCRGTVGEKIFRPWVERITNLGGKILSDRKVTDLILNEHDQATAVVCQDEVFAADAVIFAVGITGMKKIVAGSSSLQKYPEFRNLSNLNAIDVVATRLWFDRKIKIPRPSNACFGFDATTGWTFFDLNALHDEYKDEPGSVIEVDFYHGNQFLFASDAEVIRMVQNYLATCIPEFRNAQVIDSSVIRLPQAVTHFSPGSYRYMLPAQTSLKNVFMSGDWIINRHGSWSQEKAYVTGLEAANLVMSSLGEGIPAKILPIEADEPHIQLLRKINQNWRKFAGNLLPDYFLP
>NZ_CP011382.1|WP_035157802.1|5895344_5896235_-|rhodanese-related-sulfurtransferase
MTLVVATFYKFVKLPDFLAMQAPLLSYCQEQSVKGTILLAEEGINGTIAGSRDAIDAVLCFLRSDRRLADLQHKESVAKTFPFERMKVRSKKEIVTIGLPEIDPTEQVGTYVTPQEWNQLISDPEVVVIDTRNDYEVDIGTFKRAENPHTETFREFPEYVRQNLNPNQHQKVALFCTGGIRCEKASAYMLAQGFSQVYHLQGGILKYLEEVPPEASLWEGECFVFDERVAVRHGLELGSYEMCLSCGHPISETDKTSEKYEAGISCPYCFEELTEEKKQRQLEKVKQLKLSQSRDI
>NZ_CP011382.1|WP_035157804.1|5896296_5896671_-|hypothetical-protein
MVDINGTWLGTYWQDEIPTRFEAVIIQSNSNLTGNILDDGFLGDAQLSGKILGLRISFTKIYLLTSPDPIKYTGLISEDETYMRGKWNIGRNLSGSWEAQRSGESLIINLETSFRKRISQTIGN
>NZ_CP011382.1|WP_035157806.1|5896694_5897774_-|ABC-transporter-ATP-binding-protein
MAKLCLENIKRKFNHVTVIDDISFTVPDGEFWVLVGPSGCGKSTILRTIAGLESATSGNLYIGNTLVNNIPARQRDVAMVFQNYALYPHMTVAQNIAFGLQMRQVDRKIIQERVVTVARSLSLDHLLDRKPKQLSGGQQQRVALGRAIARQPQVFLMDEPLSNLDAQLRDDTRAELKELHQNLGITTVYVTHDQTEAMTLADKIVVLERGKIQQIGNPQIIYTQPANRMVATFIGSPPMNILPARITSQGCDIYGQSIQLPQKIQQQFTLTPGTNLDLGIRPEHIYITNNPEEAILTVEVKVVEPLGRETLIRTVLPGSEIIINVQAPANVYPHPGDRLSLGINLDELCLFDSKTGDRL
>NZ_CP011382.1|WP_035159585.1|5898153_5899710_-|alpha/beta-hydrolase
MATPATLAAETVTIRFGSFQQAIAVADLEEFAKTGKLPKNLKLFSSILTPQVRGLLSQRLQIDPKIGDKFVAGLSKIPAGKQFISSLGAIIPGSTAESLEATLNIALRQVNGLTALSFVRAYPQENVTIDASKAISFAVEFNPRYLQSQAFNLLLTRELDATAPSTTRFKSTLNPAAPGKLTVQTQTLSFRDSERNRTIIADIYGSQGDKQQPLVVISHGFGANRQFLTYLANHLSSHGVTVAAIEHPGSNSTAVRTANTNLAKLMPATEFIDRPQDISFLLNQLAKINLQPGRLQGKLNTEKVTVIGHSLGGYTALALAGGEINLKNVREFCRDSLSFLEAPADWLQCAATNLPEKKLQLGDSRVKSAIALNPLVGKLFGDKGLSKIRQPILILTSTADTITPSLKHQLVPFSQISGTKYLLTAVGATHLSIGDPKYQANNTLVRERRGKDTASLRMLTQGVSLAFIKQLTPEANQYKQFLSSAYTQSLSGTELPLRLVSELPTNVESWLEKIQDKK
>NZ_CP011382.1|WP_035157807.1|5900207_5901671_-|polysaccharide-export-protein
MLNTNLWKYLTQSAIALTLFSSLATAFPSASYAQKPVLKQAPTTQGTTIDTNYTLGGGDRIRVNVFEVPEYTGEYQIPPGGAINLPLIGSVTVQGLTTEEAADDIAKRYARYLKRPLISVNLLSPRPINVFVAGEVSRPGAYTISLQGGAGNDPGVQYPTVLAALTTAQGVTLSADITQVELRRKGGRNGAEKRLRLNLKELTRTGQLNQDITLRDGDTIFVPTATDINNEQYLADLRNFTASNFAADVTKPRTVAIIGEVNRPGSYLVTQGDAVNNANAAPVSGLPTVSRAIQLAGGISPQADIRNVVLRRPTRTGSEQKITLNLWQILQSGDTKQDIIVQEGDTIIIPTATEINPAEATQLAVTTLSPTKIQVGVVGEVKKPGQVDLQPNSTLNQALLAAGGFEGVRASSSTVDLIRLNPDGSVTKRKVKVDFAAGINEQTNPILRNNDVVVVYRNGVTKTSETISSFINPFSGILGVFRALFGF
>NZ_CP011382.1|WP_035157810.1|5902261_5903239_-|ABC-transporter-ATP-binding-protein
MKSVGDVPERKLSKTEPPPVVLTSELRKVYRTGFFLNQKIVSLKSCSLKVYRGETFGLLGQNGAGKTTLFKVLLGIVRPTGGRGLLLGKPLGDRAVKQRIGYLPENTYLYEYLTGWEFLQLTAGIFQIPSKVQRHRIPELLELVGLSLADAKKKQMRRYSKGMLQRVGMAQALINDPELIFLDEPMSGLDPVGRYQMREIILTLKAAGKTIFFNSHILSEVEKICDRIAILSQGELICSGSINDLLGTANTYRVKGQGGDWEVLSNWLPNIEFLADGSWQGELHGDVYDFLASLRLMGGQIMAMNLFRPSLEEFFMEQVRERKNS
>NZ_CP011382.1|WP_035157817.1|5903334_5903964_-|imidazoleglycerol-phosphate-dehydratase-HisB
MQTLSSHSEKLAFAPRIATVSRKTGETDVQVTVNLDGTGICRVATGIPFLDHMLHQISSHGLIDLDIQATGDLHIDDHHTNEDVGITLGQALYQALGDKKGIVRFGNFLAPLDEALVQVALDFSGRPHLSYGLEIPTQRVGTYDTQLVREFFVAVVNHSQMTLHIRQLDGINSHHIIEATFKAFARAMRMALEFDARRIGTIPSSKGVL
>NZ_CP011382.1|WP_035157820.1|5904119_5904896_-|enoyl-ACP-reductase-FabI
MLDLSGKNALVTGIANNRSIAWGIAQQLHKAGANLGVTYLPDEKGKMEKKVAELVEPLQPSLFLPCNVQNDQQIAETFEAIAAKWGKLDILVHCLAFANRDDLTGGFSQTSRAGFNTALEISTYSLVQLAGAAKPLMTEGGSIITLSYLGGVRAVPNYNVMGVAKAGLEASVRYLASELGPSNIRVNAISAGPIRTLASSAVGGILDMIHHVEEVAPLRRTVTQTEVGNTAAFLCSDLSSGITGQVIYVDAGYEIMGM
>NZ_CP011382.1|WP_035157823.1|5905716_5906388_+|global-nitrogen-regulator-NtcA
MIVTQDKALANVFRQMATGAFPPVVESFERNKTIFFPGDPAERVYFLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAPIEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGIPCADGITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITVHKPVTLSRQFT
>NZ_CP011382.1|WP_035157825.1|5906684_5908172_+|DUF3084-domain-containing-protein
MATGYILIVAILILGGVIATVGDRIGTKVGKKRLSLFNLRPKNTAVLITILTGLGISASTLGILFLADEGLRKGVFELQDIQKDLRRKREQLKNAEAQKSQVEGELNQAKQQEAQAQKSLERTNKNLQEANIKQKKTQAQLNRTIVQEAATKTKLQKTQNQLGQVVSQYQQAISQLQSVYNERNKQLAEIARLKQESQTLYEKAQKAINQAKAAIALRDRELAKSQEAIEQRDKKISRLDRLIQERNLVITAREQIIAKREIRLKELEQQQDYLEQEVSRLEKSYQDLRVGKLALIRYQVITAGVIRAVSPAIAQQAIVRLLDDANRIAQAELTGIGTNNSPNQATIEITRQRVEQLSQKISNGQEYVVRILSAGNYVRGEKRIEIVLDATPNVLLFKKGETLATNIVDPKTSTPEQLRQRVNQLIAASEFRARNAGILQNIQIDGRTFIAFMNQLQTYQQPLDIKAIAAEDTFTVGPLRLKFVGMQNGEILFST

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Crispr_ID: NZ_CP011382_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_17

6173597-6174436

Orphan

Consensus_repeat	Method
TTTCAATCCCGCGAACGGGAATCAGTTAGTTTCAAG	PILER-CR
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	CRISPRCasFinder
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	CRT

11 spacers

The CRISPR arrays of NZ_CP011382_17

>merge|NZ_CP011382|17|6173597-6174436|PILER-CR,CRISPRCasFinder,CRT
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACAGGACACCTACAACAACAGCAAAGAACTATTCAACAAACTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACGAAATCAAGTAAAAATGCAAGAAAAAAGCAGACCGAGCTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACTCCCTAATTACCGCACGCCCCACTAAAGGGACAGAACTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACATTCCTGGCTATTTTCCTTACGGGTTCCCAGCTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACATTGCCTCAAAGGGGAAATGCATAATAGCGGCTATATAACTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACCATTAGGAACAATCAATACATTATTAGCTTCAGAAACTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACAAAACACTTAATTAAGAGCCATAACCCTCTCTCATCCTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACCCATTATGTTCTCAGCACTAGGCATCGCTTTCCCTGACTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACAGGTTTATTCAGTTTCTATCTACGGAAATGTATCCTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACCAGTCCTTTGGATTTATTTGTTAGGTGAAAATATCCTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAACGGGTTTGCTCTTAAATCGCCTTCAAAACTATTACGAACTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAA

>NZ_CP011382|17|2|6173597-6174435|PILER-CR
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CAGGACACCTACAACAACAGCAAAGAACTATTCAACAAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CGAAATCAAGTAAAAATGCAAGAAAAAAGCAGACCGAG
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CTCCCTAATTACCGCACGCCCCACTAAAGGGACAGAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CATTCCTGGCTATTTTCCTTACGGGTTCCCAG
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CATTGCCTCAAAGGGGAAATGCATAATAGCGGCTATATAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CCATTAGGAACAATCAATACATTATTAGCTTCAGAAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CAAAACACTTAATTAAGAGCCATAACCCTCTCTCATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CCCATTATGTTCTCAGCACTAGGCATCGCTTTCCCTGA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CAGGTTTATTCAGTTTCTATCTACGGAAATGTATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CCAGTCCTTTGGATTTATTTGTTAGGTGAAAATATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA	CGGGTTTGCTCTTAAATCGCCTTCAAAACTATTACGAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAA

>NZ_CP011382|17|16|6173597-6174436|CRISPRCasFinder
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	AGGACACCTACAACAACAGCAAAGAACTATTCAACAAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	GAAATCAAGTAAAAATGCAAGAAAAAAGCAGACCGAG
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	TCCCTAATTACCGCACGCCCCACTAAAGGGACAGAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	ATTCCTGGCTATTTTCCTTACGGGTTCCCAG
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	ATTGCCTCAAAGGGGAAATGCATAATAGCGGCTATATAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	CATTAGGAACAATCAATACATTATTAGCTTCAGAAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	AAAACACTTAATTAAGAGCCATAACCCTCTCTCATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	CCATTATGTTCTCAGCACTAGGCATCGCTTTCCCTGA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	AGGTTTATTCAGTTTCTATCTACGGAAATGTATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	CAGTCCTTTGGATTTATTTGTTAGGTGAAAATATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	GGGTTTGCTCTTAAATCGCCTTCAAAACTATTACGAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAA

>NZ_CP011382|17|3|6173597-6174436|CRT
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	AGGACACCTACAACAACAGCAAAGAACTATTCAACAAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	GAAATCAAGTAAAAATGCAAGAAAAAAGCAGACCGAG
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	TCCCTAATTACCGCACGCCCCACTAAAGGGACAGAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	ATTCCTGGCTATTTTCCTTACGGGTTCCCAG
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	ATTGCCTCAAAGGGGAAATGCATAATAGCGGCTATATAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	CATTAGGAACAATCAATACATTATTAGCTTCAGAAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	AAAACACTTAATTAAGAGCCATAACCCTCTCTCATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	CCATTATGTTCTCAGCACTAGGCATCGCTTTCCCTGA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	AGGTTTATTCAGTTTCTATCTACGGAAATGTATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	CAGTCCTTTGGATTTATTTGTTAGGTGAAAATATC
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAC	GGGTTTGCTCTTAAATCGCCTTCAAAACTATTACGAA
CTTGAAACTAACTGATTCCCGTTCGCGGGATTGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035158159.1\|6183884_6184220_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223713
NZ_CP011382.1\|WP_035158150.1\|6172884_6173193_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|367760
NZ_CP011382.1\|WP_035158147.1\|6166873_6167995_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	unknown	unknown	gnl\|CDD\|99740
NZ_CP011382.1\|WP_035158145.1\|6164553_6165906_+\|DUF3370-domain-containing-protein	unknown	unknown	gnl\|CDD\|314680
NZ_CP011382.1\|WP_035158149.1\|6170933_6172526_-\|pyruvate-kinase	unknown	unknown	gnl\|CDD\|236178
NZ_CP011382.1\|WP_035158151.1\|6174533_6175121_-\|PAP-fibrillin	unknown	unknown	gnl\|CDD\|309752
NZ_CP011382.1\|WP_035158153.1\|6175451_6177980_+\|NTP-transferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|100097
NZ_CP011382.1\|WP_035159657.1\|6178416_6180090_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP011382.1\|WP_035158155.1\|6180755_6181226_-\|cupin-domain-containing-protein	unknown	unknown	gnl\|CDD\|226357
NZ_CP011382.1\|WP_035158148.1\|6168315_6169095_+\|iron-export-ABC-transporter-permease-subunit-FetB	unknown	unknown	gnl\|CDD\|377092
NZ_CP011382.1\|WP_035158143.1\|6163304_6163940_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|237288
NZ_CP011382.1\|WP_035158157.1\|6182206_6183283_-\|NADH:flavin-oxidoreductase/NADH-oxidase	unknown	unknown	gnl\|CDD\|239242
NZ_CP011382.1\|WP_046815068.1\|6166075_6166813_+\|DUF561-domain-containing-protein	unknown	unknown	gnl\|CDD\|113257
NZ_CP011382.1\|WP_035158160.1\|6184262_6185081_-\|trypsin-like-peptidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379142
NZ_CP011382.1\|WP_035158142.1\|6162577_6162841_-\|DUF2887-domain-containing-protein	unknown	unknown	gnl\|CDD\|371375
NZ_CP011382.1\|WP_035158144.1\|6164000_6164513_+\|peptidase-C15	unknown	unknown	gnl\|CDD\|238279
NZ_CP011382.1\|WP_035158154.1\|6180075_6180705_-\|dTMP-kinase	unknown	unknown	gnl\|CDD\|234814
NZ_CP011382.1\|WP_035158156.1\|6181481_6182147_-\|nitroreductase	unknown	unknown	gnl\|CDD\|223849
NZ_CP011382.1\|WP_052754540.1\|6169191_6170637_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP011382.1\|WP_035158158.1\|6183379_6183703_-\|thioredoxin	unknown	unknown	gnl\|CDD\|200072

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035158159.1\|6183884_6184220_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|223713	COG0640, ArsR, Predicted transcriptional regulators [Transcription].	2.09503e-10
NZ_CP011382.1\|WP_035158150.1\|6172884_6173193_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	3.05555e-09
NZ_CP011382.1\|WP_035158147.1\|6166873_6167995_-\|DegT/DnrJ/EryC1/StrS-family-aminotransferase	gnl\|CDD\|99740	cd00616, AHBA_syn, 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein encoded by gene pglA, is a galactosyltransferase involved in pilin glycosylation. Additionally, this CD consists of ArnB (PmrH) aminotransferase, a 4-amino-4-deoxy-L-arabinose lipopolysaccharide-modifying enzyme. This CD also consists of several predicted pyridoxal phosphate-dependent enzymes apparently involved in regulation of cell wall biogenesis. The catalytic lysine which is present in all characterized PLP dependent enzymes is replaced by histidine in some members of this CD.	2.37539e-165
NZ_CP011382.1\|WP_035158145.1\|6164553_6165906_+\|DUF3370-domain-containing-protein	gnl\|CDD\|314680	pfam11850, DUF3370, Protein of unknown function (DUF3370). This family of proteins are functionally uncharacterized. This protein is found in bacteria. Proteins in this family are typically between 452 to 532 amino acids in length.	0
NZ_CP011382.1\|WP_035158149.1\|6170933_6172526_-\|pyruvate-kinase	gnl\|CDD\|236178	PRK08187, PRK08187, pyruvate kinase; Validated.	0
NZ_CP011382.1\|WP_035158151.1\|6174533_6175121_-\|PAP-fibrillin	gnl\|CDD\|309752	pfam04755, PAP_fibrillin, PAP_fibrillin. This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins.	4.91762e-09
NZ_CP011382.1\|WP_035158153.1\|6175451_6177980_+\|NTP-transferase-domain-containing-protein	gnl\|CDD\|100097	cd05805, MPG1_transferase, GTP-mannose-1-phosphate guanyltransferase (MPG1 transferase), also known as GDP-mannose pyrophosphorylase, is a bifunctional enzyme with both phosphomannose isomerase (PMI) activity and GDP-mannose phosphorylase (GMP) activity. The protein contains an N-terminal NTP transferase domain, an L-beta-H domain, and a C-terminal PGM-like domain that belongs to the alpha-D-phosphohexomutase superfamily. This subfamily is limited to bacteria and archaea. The alpha-D-phosphohexomutases include several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Members of this group appear to lack conserved residues necessary for metal binding and catalytic activity. Other members of this superfamily include the phosphoglucomutases (PGM1 and PGM2), phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP011382.1\|WP_035159657.1\|6178416_6180090_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	8.8002e-64
NZ_CP011382.1\|WP_035158155.1\|6180755_6181226_-\|cupin-domain-containing-protein	gnl\|CDD\|226357	COG3837, COG3837, Uncharacterized conserved protein, contains double-stranded beta-helix domain [Function unknown].	1.16213e-53
NZ_CP011382.1\|WP_035158148.1\|6168315_6169095_+\|iron-export-ABC-transporter-permease-subunit-FetB	gnl\|CDD\|377092	pfam03649, UPF0014, Uncharacterized protein family (UPF0014).	1.1883e-86
NZ_CP011382.1\|WP_035158143.1\|6163304_6163940_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|237288	PRK13141, hisH, imidazole glycerol phosphate synthase subunit HisH; Provisional.	2.08301e-126
NZ_CP011382.1\|WP_035158157.1\|6182206_6183283_-\|NADH:flavin-oxidoreductase/NADH-oxidase	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	0
NZ_CP011382.1\|WP_046815068.1\|6166075_6166813_+\|DUF561-domain-containing-protein	gnl\|CDD\|113257	pfam04481, DUF561, Protein of unknown function (DUF561). Protein of unknown function found in a cyanobacterium, and the chloroplasts of algae.	1.26576e-102
NZ_CP011382.1\|WP_035158160.1\|6184262_6185081_-\|trypsin-like-peptidase-domain-containing-protein	gnl\|CDD\|379142	pfam13365, Trypsin_2, Trypsin-like peptidase domain. This family includes trypsin-like peptidase domains.	2.78585e-22
NZ_CP011382.1\|WP_035158142.1\|6162577_6162841_-\|DUF2887-domain-containing-protein	gnl\|CDD\|371375	pfam11103, DUF2887, Protein of unknown function (DUF2887). This bacterial family of proteins has no known function. These proteins may be distantly related to the PD(D/E)XK superfamily.	1.7904e-34
NZ_CP011382.1\|WP_035158144.1\|6164000_6164513_+\|peptidase-C15	gnl\|CDD\|238279	cd00501, Peptidase_C15, Pyroglutamyl peptidase (PGP) type I, also known as pyrrolidone carboxyl peptidase (pcp) type I: Enzymes responsible for cleaving pyroglutamate (pGlu) from the N-terminal end of specialized proteins. The N-terminal pGlu protects these proteins from proteolysis by other proteases until the pGlu is removed by a PGP. PGPs are cysteine proteases with a Cys-His-Glu/Asp catalytic triad. Type I PGPs are found in a wide variety of prokaryotes and eukaryotes. It is not clear whether the functional form is a monomer, a homodimer, or a homotetramer.	5.27023e-13
NZ_CP011382.1\|WP_035158154.1\|6180075_6180705_-\|dTMP-kinase	gnl\|CDD\|234814	PRK00698, tmk, thymidylate kinase; Validated.	5.93001e-97
NZ_CP011382.1\|WP_035158156.1\|6181481_6182147_-\|nitroreductase	gnl\|CDD\|223849	COG0778, NfnB, Nitroreductase [Energy production and conversion].	1.13811e-37
NZ_CP011382.1\|WP_052754540.1\|6169191_6170637_-\|hypothetical-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	4.98047e-25
NZ_CP011382.1\|WP_035158158.1\|6183379_6183703_-\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	5.42372e-53

>NZ_CP011382.1|WP_035158150.1|6172884_6173193_-|antibiotic-biosynthesis-monooxygenase
MITFVNVFTVLPDKQQVAFEVVSRVYTEVVKQQPGFIEAKVLVSDDGTRVTAVALWESEEHLAAMRQTPGFKELHNAEFKNAVVSNDGHVYSTAMEVRPSGY
>NZ_CP011382.1|WP_035158149.1|6170933_6172526_-|pyruvate-kinase
MQFTTSNSNARTQNSQAFGTLSNLSSPHNLLSTLQELRQTVETEGQATFNCWKPHINRSEFLASALNLAEYLALRQHDLRSLQAALMPWGLSSLGRIEARVIPNLDAVIASLEVICGSKSAQHLNRPPIEFFFEGDRLLQKHTEELFGQSPSQRRVRIMVTLPTEAATDYEMVREIIQRGANCVRINCAHDTTEVWGRMIDNVRRAEQETGKSCKVMMDLAGLKIRTGQVLTPPDKKRVFKGDHILLSRCEPELESELQTVESIPSPIDYFQTCCTVPEILDLLTVDTPVYIDDGKIRTRVVDTHYPVANGQPGLLLQVTHVSPKGLKLRPEKGLNFPKTVLPLSPLTEKDLSDLDFVATHADIIGYSFVQRSADIELLQQELDKRCEGLATRPAIVAKIETAIAVSNLPELIIHAAGKQSFGVMIARGDLAVEIGYQRLTEIQEEILWLCEAAHVPVIWATQVLESLVKEGTPSRGEMTDAAMAERAECVMLNKGPFIAEAITILDDVLTRMATHQLKKTPQLRALHSW
>NZ_CP011382.1|WP_052754540.1|6169191_6170637_-|hypothetical-protein
MKITKDIFKPLPAKVLLRLFFAISVISIPVLYQFNWSGFGEDSNKSKSIEKTIKDGKIISVKETETEHFQSGKTLWDWLGLAGTLAIPVVLFQFQASEQRRAEKRAFVEKEQAEQLAKVEKQQAEQREKVEKDIAEANLREEAFQDYIDRMSEILINRRSRSELFLDTNEKSNHANADNCVRDVARIRTVTILRRLENDTERQNRVLHFISDTELLQFLLKTANLSGINLSDANLSGANLSGANLSNANLSGANLSDANLSGANLSNIILNDANLTNSNLFNANLTNANLTNANLENSCIQNTIFINADLSNTILVSARTWDEEEIDNNFELISIDDGYSPPYQYEKFYYTDFSGAKLTNANLVSTNFTSVKNLTPEQIKEAKNWYEAIYNKKLFDKLGLPKSLRSIVDSKPRDFDEDVYLEKLIGCQVEVRQYIDNETKTTTRGEITGFSTSNSRVNVKTVNGENLEELSLYEIYIYMTE
>NZ_CP011382.1|WP_035158148.1|6168315_6169095_+|iron-export-ABC-transporter-permease-subunit-FetB
MSELIKLDIIDLISALGFILAAVALSLWAKIGLELNILVAVGRSLLQLAVLGYLLDFTFALNHPVAVVGFLLTLLTFAAIATKNRISAKLPLLPWVWGSLIFSTILTLIYTNYVILQPERWYAPRYLIPLFGLILANAMSAAAIAGERLVSTISSNQAEIETHLCLGATPQQAVSRYRKDAIRAGVIPTLNQMMIIAMVAIPEFTTGQLLSGINPLDAASYQILVLLMIVFSNILTTILLTQGVSQQFFNSAAQLKNKV
>NZ_CP011382.1|WP_035158147.1|6166873_6167995_-|DegT/DnrJ/EryC1/StrS-family-aminotransferase
MIQSVNSIPAFDNRQQYTTIAAEVSAVVLEILASGRYIGGAVVENFEQQFAAYHHVSNCIACNSGTDALYLALRAFDIGAGDEVITTPFTFIATAEVISAVGAKPVFVDIDATTFNLDVQQVAAAITPQTKAIIPVHLFGQPVDMTSLMAVAIAHNLIVIEDCAQSTGAKWQGERVGSIGHIGCFSFYPTKNLGGCGDGGAITTNNSEIAAKLRVLKEHGQTTRYIHAEIGVNSRLDAIQAAILTIKLQHLDSWNEKRQAIASRYHEFLSAISGITIPQELSGGEGVWNQYTIRVLDERRDWLRNQLQERGINTMVYYPRPLHLQPVYESLGYQVGQLPISEQGANEVLSLPMFPELSEEQQQQVIYSLKDCF
>NZ_CP011382.1|WP_046815068.1|6166075_6166813_+|DUF561-domain-containing-protein
MHPSLQSAFASRRALKVISGLHNFDAERVAATVKAAHYGGATFLDIAADVTLVQLAKGLTNLPICVSAVEAEKFVPAVAAGADLIEIGNFDAFYAQGRRFEAEEVLALTYQTRSLLPEITLSVTVPHILTLDQQVQLAEDLVKAGADIIQTEGGTSSQPSHGGTLGLMEKAAPTLAAAYEISRVVSVPVLCASGISNVTAPLAIAAGAAGVGVGSAINQLNSEVAMIAAVRSLVEALATPVQTKV
>NZ_CP011382.1|WP_035158145.1|6164553_6165906_+|DUF3370-domain-containing-protein
MLPFLLILPIAQSNIQPIGEEIIQIQEVLPLPGKLDIIPTFNSNSPEKVLEEGILLSTFPSQGKKAPTAHLNFPFRGRFDIFAHHIAEAPSPDNLRTLYLGVMLHNPGRKPVKVKVFQAASYLSQPDAPFIQLPSFSDNWLGNVFAGPGDRVMNEVLRGQRQNNFPAEITIPPQSSQMVMNAPIPVKGLNPPLNGRSALMRLWSSGKVYAASMAMFAPTNSDGTERSPNVQEWQNLLNSGDLSTPRDKVPTPPGQTPIIYGRVAGVAQGSRWRAFITDNPQVKYLTIPQAGQAYSYALSTVDGGTLGTGQVQSAPMLARYPDTAYRAHGNYGIQYSLKLPLYNKTQSNQKVTISLQTPIKEENLKKGGLRFFSTPAKQTFFRGTVKLSYKNDQGELQDKFFHLVQKRGQPGEALATLQMKPGDKRLVEVDLLYPPDATPPQVLTVTTDRN
>NZ_CP011382.1|WP_035158144.1|6164000_6164513_+|peptidase-C15
MSKRFLLTSFDIWLPHHQSNSSDDLLTQVSKLEGISHDLTCLRLLPVDIALASSQVIEKIRELQPQAIICCGMAEKRSQLTVESNASCGEAVLQTTVDLQNLLALSENVGISHDCGKFICEGLYYSVLDYLNRQQIKVPCIFVHVPILTEDNLSEITRDFLLIIHQLALS
>NZ_CP011382.1|WP_035158143.1|6163304_6163940_-|imidazole-glycerol-phosphate-synthase-subunit-HisH
MAVIAVVDYDMGNLHSVCKGLERAGATPKITDSAREMELADAVLLPGVGAFDPAVQHLRSRGLEQPIKAAISSGKPFLGICLGLQILFESSEEGHEPGLGIIKGKVRRFRPEPGITIPHMGWNQLEFTQPKCLLWEYLAPHPWVYFVHSFYVDPLDTTVRAATVTHGSQSITAAVARDNLVAVQFHPEKSSNIGLQILSNFVAQVREEIAA
>NZ_CP011382.1|WP_035158142.1|6162577_6162841_-|DUF2887-domain-containing-protein
MKTDSIFYRLFQEFPNIFFELIGNSAATATGYEFSSVEVKQTAFRIDGVFLPDVEEKPIYFVEIQFAQELELTVEEVTQAAQQQSTP
>NZ_CP011382.1|WP_035158151.1|6174533_6175121_-|PAP-fibrillin
MDDNITTTIIALKAELSQRLAGLSLQQAIFPEPEPTIDGIVFSLEEMNPTPEPLSSDSLTGEWQLIYASRGTVVTRKLATTPDWMSVKINQVWQNLTVDEAGKIATSNCALMELPVLGEWQVQAEGVWQREDEKTALVSFCAFSLQATKPLTLPRLKIPVLEFLRNQAVWITSYLDGEMRIGRGKTGNLFVFRRR
>NZ_CP011382.1|WP_035158153.1|6175451_6177980_+|NTP-transferase-domain-containing-protein
MRAVLMAGGSGTRLRPLTCDLPKPMVPILNRPIAEHIINLLKRHQITEVVATLHYLPDALRDYFQDGSDFGVQLTYAVEEDQPLGTAGCVKNIAELLDETFLVISGDSITDFDLTAAIEFHKRKQSKATLILTRVPNPIEFGVVITDETGQINRFLEKPSTSEIFSDTVNTGTYILEPEVLEYLPDHQETDFSKDLFPLLLAKGEPMYGYIAQGYWCDVGHLDAYREAQYDALDYKVKLDFPYKEISPGLWVGQNTYIDPTAQLEAPAVIGDNCRIGARVQIEAGTVIGDNVTIGADANLKRPIIWNGAIIGEEAHLSACVISRGTRVDRRAHVLEAAVVGSLSTVGEEAQISPGVRVWPSKKIESGAILNINLIWGNTAQRNLFGQRGVQGLANIDITPEFAVKLGAAYGSTLKPGSKVTVSRDQRNISRMVTRSLIAGLMSVGISIQNLDATAIPISRTVIPKMDVVGGIHVRVHPDRPDYILIEFLDGKGINISKAKEKKIEGAYFKEDMRRSQIHEVGDVAYPSQVADYYCTAFEKLLNIHTIRNSRAKVVIDYAYAVSGAVLPQMLHTFGADAVVLNASLNKTAMSAADKEGLVTQLGHVVEALKANFGVQVSANGEQLILVDESGIPIRGEILTALMVDMMLTSHPRGTVVVPVHASSAVEQIARRHDGRVIRTKANSTALMEASYTNSNVVLGGSADTGFIFPQLHPGFDSMFCIAKLIEMLTIQERSLASVRAEIPRVIHKTYAVRCPWTVKGALMRHLVETHPAQNLELIDGVKICQPYDDSWVLLLPDASEPIVHLFANSNERDWVDDNIRLYRTRVQAFVEKEEEEVAAEN
>NZ_CP011382.1|WP_035159657.1|6178416_6180090_+|HAMP-domain-containing-histidine-kinase
MSAEQPSTDELPTIEFPSRGKLKASSWRIHQKIGYGYFLAIGIGFFGSVTGLVIANSYRAQGIRQYNHAHFQSQMLSGYKDAIMEAQLYSSNLAAFVGESEKLTATRTEFWNSIAKTKKIEQEIIGFLDSKPKKLAATEDTLKTLLRYSANNLDAYVQQIESALQPIDRQQLSPEQVPVIREKLLTVMRGETAAQLDEMSHKLTNILQIAERQEQEKNDDVEQAKIIERLIIIASMLLSVCVAAIVAWRTSRAIAEPVITVTQVAEQVARKSNFNLRAPITTEDEIGLLAKSLNRLIEQVSKHTKELEQAKELAEAANQAKSGFLANISHELRTPLNAIIGLSQLLEDDAVDMGLTGDIVSDLESINSAGKHLLNLINDILDLSKMEAGKMTFYPETFDVVSLINNVVVTVKPLVEKNGNILEVDYDHELGVIYTDQTKLRQVLYNLLSNAAKFTTNGKIRLKVKRDNNHPATGQLQELITFIVTDTGIGMSLAQQQKLFQPFTQGDASTTRKYGGTGLGLAITRHFCHMMGGDILVKSEPGVGSTFVIKLPTSMTA
>NZ_CP011382.1|WP_035158154.1|6180075_6180705_-|dTMP-kinase
MDGKLIVFEGVEGCGKTTQIHLCHQWLQSLGVDVVVTRQPGGTDLGAHIRQLLLDSGKNSISNRAELLLYAADRAQHVEQLLLPNLAAGKTVLCDRYTDSTIAYQCFGRGLNRELIDNLNHIATTGLHSDLTLWLDIDVATGLARKIKSGEAPDRIEQEKIEFHHRVQQGYKFLANTHPERIRRIDASLTQEVVHKQIQTILTAKLGSH
>NZ_CP011382.1|WP_035158155.1|6180755_6181226_-|cupin-domain-containing-protein
MIIHPEDVPEYTTTVYPEPFKNVVAGRIKQRLGSFAGLKNFGVNLTKLAPGSASALRHWHSSQDEFIYVLTGEITLITDEGEQILTPGMAAAFPAGEANGHHLVNRSGAVATYLEIGDKTPGDIATYPDDDLMAIENSGSWVLTRKNGQPYANESK
>NZ_CP011382.1|WP_035158156.1|6181481_6182147_-|nitroreductase
MNPITEVQPLDVPKAIIQRRSIKTFKSDPITPELLKQLVELTIAAPSSFNIQDWRIILVQDEAQKAALCEACWNQKQVVQAPVSFVFAADVLAGEKDLTPMLEQGLASGAFNEGTVNYFRTSVPQFQAGLGDKKREFAVKDAMIAATHLVLAAESLGLSTCFMNGWIEEKVKAVIGAENDPDLAIAVVVPVGYAAEPRLNPGRLPLSSNVFVDRVGNPYQG
>NZ_CP011382.1|WP_035158157.1|6182206_6183283_-|NADH:flavin-oxidoreductase/NADH-oxidase
MPNLFEPFQLKDVTLRNRIGVSPMCQYSSEDGRATDWHLVHLGSRAVGGAGLIIAEATAVEARGRITPGDAGIWSDEHIAPLQRINTFIKEHGAISGIQLAHAGRKASAARPWEGDNSLADTEGGWDTLGASAVAFDTEKLWRIPKEMTKQDIQEVKEAFRGAALRSLEAGYEWLELHFAHGYLVHSFYSPLSNQRTDEYGGSFENRIRLALEITRIVKEVWPERLPLTARLSCSDWVEGGWNIDDSVELSKKLKAEGVDLIDCSSGFNTPNYQEYPFGSGWQVPFSERIRKEAEIATATVGFITNAMQADELIRNQRADIVLLAREMLRDPYWSHRAAVELRRKNVTTLPIQYASWL
>NZ_CP011382.1|WP_035158158.1|6183379_6183703_-|thioredoxin
MSTVTNVTEATFKQEVLDSEVPVLVDFWAPWCGPCRMVAPVVDEVATEYEGQVKVVKLNTDQNPTVASHYGIRSIPTLMVFKGGRQVDTVVGAVPKTTLAKTLGQYL
>NZ_CP011382.1|WP_035158159.1|6183884_6184220_+|helix-turn-helix-transcriptional-regulator
MRFLYHPDRKHISLAGVLYALGDPVRLEIVRQLATRGEQCCAGFEFAIAKSTMSNHFKILRESGVVWTRKEGTQHINSLRREELEVLFPGLLDAVLRSAQPMVNQESLVNS
>NZ_CP011382.1|WP_035158160.1|6184262_6185081_-|trypsin-like-peptidase-domain-containing-protein
MSRYIAAIACVFCVSLAACEIISSSSSTVSPSDKAKSTAPLNAQLSSASTEKLSPQAVKKLHQYAQKITVKVMSQDFLGSGIILQKKESVYTVLTNAHVLRAGEAPYRIQTSDGQIWNAHIPKKYPSLKQNFAQGHDLAVLTFHCDRQVYPVATFGKQPQVGESVFVAGFPYIEDSTHKQKLVFNSGKISLLLPKPLEGGYQIGYTNDIQKGMSGGPLLNQQGQVVGVNGMHAYPLWDSPSVFMDGSEAEETLHKKINRLSWAVPIEKVISK

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Crispr_ID: NZ_CP011382_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_18

6240746-6241158

Orphan

Consensus_repeat	Method
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	CRT
TTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	CRISPRCasFinder
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	PILER-CR

5 spacers

The CRISPR arrays of NZ_CP011382_18

>merge|NZ_CP011382|18|6240746-6241158|CRT,CRISPRCasFinder,PILER-CR
GTACCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAACTATGCTTATTCTGCTGTAGTAATATTCATACTTGAGTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAACCGGGCGAAAAAATGCACAGCAAATGGTCCAAATACATTTTTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAACGATCGCCTCCCACCCAATAAGAGTAGCATTCAATTTCGTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAACCGCGATGATCGTTCCCCGCTCCCTTGAGTTGTGGTTGTTCGTGTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAACGCAAACCAGTCAGATTGAAAACTCTCGTATTCCTTCCGGTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC

>NZ_CP011382|18|4|6240746-6241158|CRT
GTACCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	TATGCTTATTCTGCTGTAGTAATATTCATACTTGA
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	CGGGCGAAAAAATGCACAGCAAATGGTCCAAATACATTT
TTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	GATCGCCTCCCACCCAATAAGAGTAGCATTCAATTTC
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	CGCGATGATCGTTCCCCGCTCCCTTGAGTTGTGGTTGTTCGT
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	GCAAACCAGTCAGATTGAAAACTCTCGTATTCCTTCCG
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC

>NZ_CP011382|18|17|6240747-6241158|CRISPRCasFinder
TACCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	TATGCTTATTCTGCTGTAGTAATATTCATACTTGAG
TTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	CGGGCGAAAAAATGCACAGCAAATGGTCCAAATACATTTT
TTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	GATCGCCTCCCACCCAATAAGAGTAGCATTCAATTTCG
TTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	CGCGATGATCGTTCCCCGCTCCCTTGAGTTGTGGTTGTTCGTG
TTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	GCAAACCAGTCAGATTGAAAACTCTCGTATTCCTTCCGG
TTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC

>NZ_CP011382|18|3|6240818-6241158|PILER-CR
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	CGGGCGAAAAAATGCACAGCAAATGGTCCAAATACATTT
TTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	GATCGCCTCCCACCCAATAAGAGTAGCATTCAATTTC
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	CGCGATGATCGTTCCCCGCTCCCTTGAGTTGTGGTTGTTCGT
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC	GCAAACCAGTCAGATTGAAAACTCTCGTATTCCTTCCG
GTTTCCGTCCCCTTGCGGGGTTATGGGGGTCTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_082127400.1\|6232680_6235215_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270916
NZ_CP011382.1\|WP_035158202.1\|6253108_6254116_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035158191.1\|6230322_6230859_-\|DUF3172-domain-containing-protein	unknown	unknown	gnl\|CDD\|371494
NZ_CP011382.1\|WP_035158192.1\|6231050_6232262_-\|ferric-reductase	unknown	unknown	gnl\|CDD\|225392
NZ_CP011382.1\|WP_035158203.1\|6254118_6255639_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP011382.1\|WP_035158199.1\|6244150_6245527_+\|cytochrome-c-biogenesis-protein	unknown	unknown	gnl\|CDD\|214387
NZ_CP011382.1\|WP_035158189.1\|6227379_6228552_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	unknown	unknown	gnl\|CDD\|223594
NZ_CP011382.1\|WP_035158188.1\|6226196_6227282_-\|glycosyl-transferase	unknown	unknown	gnl\|CDD\|273203
NZ_CP011382.1\|WP_035159666.1\|6255700_6256390_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|275103
NZ_CP011382.1\|WP_035158201.1\|6251136_6252513_-\|cytochrome-P450	unknown	unknown	gnl\|CDD\|225035
NZ_CP011382.1\|WP_035158190.1\|6228675_6230184_+\|TM0106-family-RecB-like-putative-nuclease	unknown	unknown	gnl\|CDD\|274603
NZ_CP011382.1\|WP_144416083.1\|6241474_6241753_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035158195.1\|6238567_6239884_+\|acetyl-ornithine-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235599
NZ_CP011382.1\|WP_035158196.1\|6239995_6240661_-\|deoxyribonuclease-V	unknown	unknown	gnl\|CDD\|236937
NZ_CP011382.1\|WP_144416115.1\|6245845_6247096_-\|IS701-family-transposase	unknown	unknown	gnl\|CDD\|227946
NZ_CP011382.1\|WP_035158193.1\|6235204_6235684_-\|DUF29-domain-containing-protein	unknown	unknown	gnl\|CDD\|366774
NZ_CP011382.1\|WP_035158198.1\|6243380_6244109_+\|cytochrome-C-biogenesis-protein-CcdA	unknown	unknown	gnl\|CDD\|280792
NZ_CP011382.1\|WP_035158200.1\|6247360_6250999_-\|magnesium-chelatase-subunit-H	unknown	unknown	gnl\|CDD\|215643
NZ_CP011382.1\|WP_035158194.1\|6235700_6238340_-\|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N	unknown	unknown	gnl\|CDD\|181933
NZ_CP011382.1\|WP_035158197.1\|6241796_6243002_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	unknown	unknown	gnl\|CDD\|223843

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_082127400.1\|6232680_6235215_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.65689e-63
NZ_CP011382.1\|WP_035158203.1\|6254118_6255639_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	8.71186e-17
NZ_CP011382.1\|WP_035158191.1\|6230322_6230859_-\|DUF3172-domain-containing-protein	gnl\|CDD\|371494	pfam11371, DUF3172, Protein of unknown function (DUF3172). This family of proteins has no known function.	9.66663e-98
NZ_CP011382.1\|WP_035158192.1\|6231050_6232262_-\|ferric-reductase	gnl\|CDD\|225392	COG2836, COG2836, Uncharacterized conserved protein [Function unknown].	5.04028e-52
NZ_CP011382.1\|WP_035158199.1\|6244150_6245527_+\|cytochrome-c-biogenesis-protein	gnl\|CDD\|214387	CHL00177, ccs1, c-type cytochrome biogenensis protein; Validated.	6.59847e-172
NZ_CP011382.1\|WP_035158189.1\|6227379_6228552_-\|aminotransferase-class-V-fold-PLP-dependent-enzyme	gnl\|CDD\|223594	COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].	7.59853e-95
NZ_CP011382.1\|WP_035158188.1\|6226196_6227282_-\|glycosyl-transferase	gnl\|CDD\|273203	TIGR00661, conserved_hypothetical_protein, conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. [Hypothetical proteins, Conserved].	3.14867e-05
NZ_CP011382.1\|WP_035159666.1\|6255700_6256390_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|275103	TIGR04283, glycosyl_transferase_family_2, transferase 2, rSAM/selenodomain-associated. This enzyme may transfer a nucleotide, or it sugar moiety, as part of a biosynthetic pathway. Other proposed members of the pathway include another transferase (TIGR04282), a phosphoesterase, and a radical SAM enzyme (TIGR04167) whose C-terminal domain (pfam12345) frequently contains a selenocysteine. [Unknown function, Enzymes of unknown specificity].	1.73895e-114
NZ_CP011382.1\|WP_035158201.1\|6251136_6252513_-\|cytochrome-P450	gnl\|CDD\|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	2.05635e-102
NZ_CP011382.1\|WP_035158190.1\|6228675_6230184_+\|TM0106-family-RecB-like-putative-nuclease	gnl\|CDD\|274603	TIGR03491, TIGR03491, RecB family nuclease, putative, TM0106 family. Members of this uncharacterized protein family are found broadly but sporadically among bacteria. The N-terminal region is homologous to the Cas4 protein of CRISPR systems, although this protein family shows no signs of association with CRISPR repeats.	0
NZ_CP011382.1\|WP_035158198.1\|6243380_6244109_+\|cytochrome-C-biogenesis-protein-CcdA	gnl\|CDD\|280792	pfam02683, DsbD, Cytochrome C biogenesis protein transmembrane region. This family consists of the transmembrane (i.e. non-catalytic) region of Cytochrome C biogenesis proteins also known as disulphide interchange proteins. These proteins posses a protein disulphide isomerase like domain that is not found within the aligned region of this family.	1.01457e-43
NZ_CP011382.1\|WP_035158195.1\|6238567_6239884_+\|acetyl-ornithine-aminotransferase-family-protein	gnl\|CDD\|235599	PRK05769, PRK05769, acetyl ornithine aminotransferase family protein.	0
NZ_CP011382.1\|WP_035158196.1\|6239995_6240661_-\|deoxyribonuclease-V	gnl\|CDD\|236937	PRK11617, PRK11617, deoxyribonuclease V.	5.18732e-131
NZ_CP011382.1\|WP_144416115.1\|6245845_6247096_-\|IS701-family-transposase	gnl\|CDD\|227946	COG5659, COG5659, FOG: Transposase [DNA replication, recombination, and repair].	4.08056e-65
NZ_CP011382.1\|WP_035158193.1\|6235204_6235684_-\|DUF29-domain-containing-protein	gnl\|CDD\|366774	pfam01724, DUF29, Domain of unknown function DUF29. This family consists of various hypothetical proteins from cyanobacteria, none of which are functionally described. The aligned region is approximately 120-140 amino acids long corresponding to almost the entire length of the proteins in the family. Structure 3fcn is a small protein that has a novel all-alpha fold. The N-terminal helical hairpin is likely to function as a dimerization module. This protein is a member of PFam family PF01724. The function of this protein is unknown. One protein sequence contains a fusion of this protein and a DnaB domain, suggesting a possible role in DNA helicase activity (hypothetical). Dali hits have low Z and high rmsd, suggesting probably only topological similarities (not functional relevance) (details derived from TOPSAN). The family has several highly conserved sequence motifs, including YD/ExD, DxxNVxEEIE, and CPY/F/W, as well as conserved tryptophans.	9.34356e-64
NZ_CP011382.1\|WP_035158200.1\|6247360_6250999_-\|magnesium-chelatase-subunit-H	gnl\|CDD\|215643	PLN03241, PLN03241, magnesium chelatase subunit H; Provisional.	0
NZ_CP011382.1\|WP_035158194.1\|6235700_6238340_-\|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N	gnl\|CDD\|181933	PRK09532, PRK09532, DNA polymerase III subunit alpha; Reviewed.	0
NZ_CP011382.1\|WP_035158197.1\|6241796_6243002_+\|FtsW/RodA/SpoVE-family-cell-cycle-protein	gnl\|CDD\|223843	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning].	2.47346e-98

>NZ_CP011382.1|WP_035158196.1|6239995_6240661_-|deoxyribonuclease-V
MKIHQRHDWDLSLEDAKTIQKQLQAEVITTDQFTEPVKYVAGVDMGFEADGTISRAAVAVLSFPDLEVVETQIAYRPTSFPYIPGFLSFREIPAVLDALEKIQTIPDIILCDGQGIAHPRRFGIACHLGVILNLPTIGVAKSLFIGSHGELPESRGSWQPLIHNSETIGAVLRTRVGVKPLYISIGHRISLATAIAYVLRCTPKYRLPETTRIADKLASDR
>NZ_CP011382.1|WP_035158195.1|6238567_6239884_+|acetyl-ornithine-aminotransferase-family-protein
MLSIPLTRSLPRSPQIITPLPGKRAQELVERDRAVTSPSYTRDYPLVVARGEGCMVEDVDGNVFLDMTAGIAVTATGHAHPQVVEAIQAQAANLIHMSGTDFYYEPMVEFAEMLADRTPFPHGAKVFFTNSGAESNEGAMKLARYYTGRSQMIAFLGGFHGRTYGAMSLTGSKAVQRKGFGSLVPGITHIPYGNHASLDYLENQLFPAMLPPQEVAAIVVEAIQGEGGYIVPTPGFLQRIREICDRHGILMVVDEVQSGMGRTGKLFAIEHWGIMPDIITTAKGIASGLPLGAILARPEIMTWQPGSHATTFGGNPIACAAGIATLKLLENGLMANATKMGEFLQTRLGELQGIFPRVSPSRGKGLMVAVDLWDESGELDSTLRDRVLQEAFQRGLLLLGCGKAAIRFCPPLVIDSEQIDIAVDILKDILAKVTPQHD
>NZ_CP011382.1|WP_035158194.1|6235700_6238340_-|trans-splicing-intein-formed-DNA-polymerase-III-subunit-alpha-N-terminal-partner-DnaE-N
MSFVPLHIHSDYSLLDGASQLPALVDRAIELGIKAIAITDHGVMYGAIELIKICRSKNVKPIIGNEMYLINGDIGKQERRPRYHQVVLAKNTQGYKNLVKLTTTSHLEGVQGKGIFSRPCINKDLLKQYSEGLIVTSACLGGEVPQAILSGRVDAARKVAKWYKDIFGDDYYLEIQDHGSQEDRIVNVEIIKIAQELDIKFIATNDSHYTSCYDVEAHDALLCIQTGKKVFEENRMRYSGTEYLKSADEMRMLFRDHLPEDIIESAINTTLEVAEKIEPYSIMGEPRIPNYPIPPGHTADTYVEEVSWDGLLQKLNRKSRHEIDSTYKERLEYELKMIQQMGFSTYFLVVWDYIKFARDNNIPVGPGRGSAAGSLVAYTMGITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEQRDKVIDYVTQKYGKERVAQIITFNRLTSKSVLKDVARVLDIPYGESDKMAKLIPVSRGKPAKLKVMISDDTPEAEFKERYDNDPKVRHWVDMAMRIEGTNKTFGVHAAGVVISADPLDEIVPLQKNNDGSVITQYFMEDLESLGLLKMDFLGLRNLTMIQKTIDLIEKNPKHGFKLDPYEITSQERKAQKILAKGEYANLPKDVQATYRLLEKGELEGVFQLESSGMRQIVRDLKPSNIEDISSILALYRPGPLDAGLIPKFINRKHGREEIEYEHSLLESILNETYGIMVYQEQIMKIAQDLAGYSLGQADLLRRAMGKKKVSEMQKQQEKFIDGSTKNGVKKQIAEKLFDDMLKFAEYCLSYDTEIFTVEYGFLPIGEIVEKRLECTVLTVDNHGNIYSQPIAQWHHRGQQQIYEYGLEDGSVIRATKDHKFMTTDGQMLPIDEIFERGLDLLQVTNLDNI
>NZ_CP011382.1|WP_035158193.1|6235204_6235684_-|DUF29-domain-containing-protein
MLIPTDLAIKSLYEKDYYLWLRTTINKLQAAHFDSVDIENLIVELESMGKREKRAIKSYLIRLLEHMLKLKYWQQERERNQGHWQAEIRTFRQEIKDGLKDSPSLQPYILEIFDECYQQARAVASDRSQIPLDKFPVNPIASLEQVLDDSWLPEPDITE
>NZ_CP011382.1|WP_082127400.1|6232680_6235215_+|ABC-transporter-substrate-binding-protein
MRIHCTNPRCRYPHNEFSGDLRTSQQTPGLQRYCQSCGMRLILNQRYLPLEEIGRGGFGRTFRAQDLVFGRECAVKLLHPQSSLTESEIFSVQTSFEKGAKILCNLKHSQIPTVYDFFSLPVPDEPWETPQENQVRQKLFYLVQEYVPGITLMQELGDKRRFSQSEVLEFLHSMLQVMKYTHKQGVIHRDIKPANIIRRNCTDKMLYLIDFDTAIKRELEPGIAVNQSIAIGTRGYAPPEQLDGEDISASADLYALAATCIHLLTGRHPEEIRQATHPKRLNGVWRRYCTDVGDRLGEILDRMLSLRPSDRYQSADDVLAVLGGGTILPPIDFLPIESTLPQRDITEPPSESKSRNKIPKSTSKNKIFKWRWIILAITACFLSIIVYSGKDSLQNIFFVGNKPNLTRCIDDDKFSCGEKRLIAAKNSIDITDKQLFDDGVKAFQEGRYSDAVNKFSQYLEQQPNEPEARIYLNNAKAILYNPQILKLGVCVPIFSDGISRNSKDGVTEQILRGVALAQEQINRDSIQGQKLFLQICNDRNKMRQAKIVARKIVDDGSILGVIGHYSSDTTLAANQVYHQEIISVSPSSTAVRGENFLLQNDNLRVYPPADLTTSKLVDYISSQRIKKAAIIYEKGKSFPESMRQTFRDNFKKQGGQIVEDCNISDRTNNISKCVAKAKQRQAEVVLIAIMNESAEEEVSEIFRNAGNIRFLSGSTLYTRNIRNLPDGKAIIAIPWHRSIDENNLSPFEEESKSLWGTRYVDILAVVGYDATQTIIQGLKNIQGDITREKLYQELRETDTFSAKSAIENVKIQFNESGDRLVNDSNKDKLMFLVTPKNGEFVPIP
>NZ_CP011382.1|WP_035158192.1|6231050_6232262_-|ferric-reductase
MLDFWLVMSLGFLGSFGHCLGMCSPLTVAFSLSHPSAKPSWQQQLWFHLLLNLGRVLSYTLVGAGIGGLGSVLIAGGQMAGVGSQFRQFMAIATGIMLIWFGLTQIKPDFLPRIPLLHPLLSGSLHNHLSRIMGRFSAQKQWWTPWILGMIWGWIPCGFLYAAQIKAASTGDVAIGAITMLSFGLGTLPTMVGVGFSTSFLSQDKRSQLFRLGGWITLIMGVITVVRTGDTMTDYTGHAALFCLILALIARPLSGFYAAPLRYRRLLGVSAFILGAIHTTHMIEHSWQWNFAAFWFLTPDWQVGIIAGAIALLLMLPATLTSFNSLQTYLGKRWRQIHLLTLPSLLFAVSHAILIGSHYLGSTPGNQPAAIILAITTLMIFLLRQSWFWHTLGLSRFYTHPKN
>NZ_CP011382.1|WP_035158191.1|6230322_6230859_-|DUF3172-domain-containing-protein
MRRKPTGRTSTNSRSPAFQAPIFNITSIAILGGVFVLGVGIGIAFSSTATFTPTNVASREFIDTKAPNPDICVQYGASAMVMDTRLFVTLNPFNVYVAQPSMRPGCVLRTNNWAILEQRKLISGDQVRECKNRLNTFGYTGDLGQKPEISCIYQNEAAKNFFITDPGAVTAPQETDRF
>NZ_CP011382.1|WP_035158190.1|6228675_6230184_+|TM0106-family-RecB-like-putative-nuclease
MLINAELLLQYQRCKRRPYLDTHGDFRDKDAVNDLLVKLQQDRITYQANILANWRVVQPQYHRGNLPAAMGATLELMEQGVECIHQGVLIGKYADKYTLVSRPDLLVKQPGVSRFGDWVYEPIGVELGKRPKQEYQVVVAFHAQILAAVQQAAVDTGWLILRGKEGSYPVDLGKWVPQMGKIIQEYIQTLESEEAPEVFISRQKCTLCPWYSTCYAIAQSQKHLSLLPGVTPVRYAQLQGLDITTLESLAATHPTELENLPGFDSRVAPKLILQAKAVYENRPLILLGDDGEDNEDDMVDMSLNKRNGINHHDSPIELYFDIEAQPDLNLDYLLGVLVMDRQNHTEKFYSLLAETPADEKVIWQQFLDLVNQYPDAPIYHFCVYEVDTVKRLAKQYRTPYSDISPILNRFVDVYEKLTQTVALPVESYALKTIARWLGFEWRDKEASGAKCIYWYDQWLKTGDRTLLETIQRYNEDDCRATRSVKDWLVEFLQNMEKYPSPY
>NZ_CP011382.1|WP_035158189.1|6227379_6228552_-|aminotransferase-class-V-fold-PLP-dependent-enzyme
MNNLYHHRQHFPALANKAYFNYGGQGTMPQAAIEAITQAHATIQELGPFSNPVSSWIAQEYFATRGAIASELNVSPDTITLTEDVTVGCNIAMWGLNWQQGDHLLLSDCEHQGIVATAQEIARRFSVEVTTCPLLNTRNQGDPCAVIAQHLRPNTRLVAISHILWNTGQVLDIDKIAELCIENSSETRLLVDAAQSVGSLPLDFSNSRVDFYAFTGHKWLCSPAGIGGLYVRAAARESLRPTFIGWRGIITDSHGQPQDWQPDGRRYEVATSDVTLYPALREAIAIHNQWGSTKERYQQILQKSAYLWQKLMKLPEIECLRDSPPESGLVSFRLQNTSSTNQKLVQYLESQKIFTRTLANPNCIRACTHYFTLESEIDKLVETIQEFLGN
>NZ_CP011382.1|WP_035158188.1|6226196_6227282_-|glycosyl-transferase
MKRPTLYIAVTNHGFGHATRTAAVAATIQKLYPQVLLIMATTAPRWLLECYIEGDFIHRPRAFDLGVVQADSLQMDKAATKEKLLEIKKNQNSLVASEVNFLRQNRVDLILGDVPFLTPVIAKAAGIPCWMMSNFGWDLIYRDWGGEFVEIADWISECYSKSDRLLLLPFHEPMSAFPNITEIGLTGGNPRYTAAEIRQTWGITAPRENTILLTFGGLGLQEIPYNNCLLFPEKQFLTFDKGAPDLPNLIKITDRKWRPVDIMPVCSQVVSKPGYGTFAEAAKLDIPITTITREDFAEAAYLITGFADYSYHQIIKPTDLFHSQWEFLTQPPQSPQKSTTLPKDGNETIANMVIEYLTLVK
>NZ_CP011382.1|WP_144416083.1|6241474_6241753_+|hypothetical-protein
MPIRLVTKINNWVIPRVYRFRIPAPSVFADFESQNRHSLAIALCAAPLGSIALAERSSITHQDCHSLAIGFQPPTSILFNLPPSPFCFLRII
>NZ_CP011382.1|WP_035158197.1|6241796_6243002_+|FtsW/RodA/SpoVE-family-cell-cycle-protein
MNLRSLIPFLDDSVSSWALEARLLRWLTLTWLFFGLVMLFSASYAVADVKHDDGLYYFKRQLIWVVVAFFGFNFIVNLPLKRILGISHWLVILLLCLIFVTLIPGLGKTDLGAARRLLGPIPIQPSELIKPFLVLQSARVFGMWERFSWGVRFTWLGIFALVILGILAQPNLSTAALCGMTIWLIALAAGLPYKYLGGTALSGLLLATLSISIREYQRKRVMSFINPWADATGDGYQLVQSLLAVGSGGSWGTGFGQSQQKLFYLPIQDTDFIFSVFAEEFGFIGSVVLLVILAIYATLGLIVALRATQPVYRLVAMGVTIVIVGQSFLHIGVTTGVLPTTGLPLPLFSYGGNSMIASMLLTALLVRVARESNEAEVVPIRGKELINDRQRSKKGFTKIFR
>NZ_CP011382.1|WP_035158198.1|6243380_6244109_+|cytochrome-C-biogenesis-protein-CcdA
MLENLQTQLYQLEQFANTLVTNQLTHLSLVSVGVIFMAGLLTSLTPCMLSMLPITIGYIGGYEAKTRWQAAAQSTWFALGLATTLAAMGIIAALVGKVYGQVGIGLPIIVSILAILMGLNLLEALPLTFPSFGGTEWISQELPSGVRAYLIGLSFGVVASPCSTPVLASLLGWVANSQDLLLGGVLLISYTAGYVAPLILAGTFTASIKKILELRRWSSWINPVSGVLLVGFGVFSLLTRLI
>NZ_CP011382.1|WP_035158199.1|6244150_6245527_+|cytochrome-c-biogenesis-protein
MTLDNPTSKESNVFVSFWQFIRQEFLPILTDLRLAILLLLAIALFSISGTVIEQGQAPDFYQANYPEHPALFGFLTWKVILLVGLDHVYRTWWFLALLIFFGTSLVACTFTRQLPALKAAQRWKFYDQPRQFAKLALSAEFDIEKIQDASVETLGQTLQKRRYKVFPSEGGILYARKGIIGRIGPIIVHIGIVVILLGAIWGAMTGFMAQEMVPSGNTFQVKNIIDAGPWASAQTPRDWSVRVNRFWIDYTPSGGIDQFYSDMSVVNQQGKEIDHKTIFVNQPLRYKGITFYQTDWGISAVRVKLNNSPVFQLPMAALDTKGKGRLWGTWIPTKPDLSAGVSLLAKDLQGMVLIYDAEGKLVDTVRSGMSTQVNGVTLKVLEVVGSTGLQIKADPGIPGVYAGFALLMAGVVMSYFSHSQIWALQQGGKLYVGAKTNRAQVAFEREVLTILDGLNTPR
>NZ_CP011382.1|WP_144416115.1|6245845_6247096_-|IS701-family-transposase
MRHFEAFKFLHLGIVSEIPRKTLPLIAKTVGLKDSQTLHHFLRDALWDVKKLREIRLWLIKRFIGEREIILCIDETGDKKKGKSTDYVTSQYIGNLGKTENGIVSVNAYGVVDGITYPLMFQIFKPRNRLREGDKYKSKPQIAIEIIQELKEWGFKIKLVLADSLYGESGDVIRCLEKLELEFIVAIRSNHGVLMPPGSRKRYNRWKAYEQKLSHRQTETRYLREIIFGKRRRTRYYQISKMNTPDPTGDESWYIMTNLSTDLSLNVAQLYSLRNWIEYGFKQVKNELGWADFRLTDYESIERWWEIIFSAYLFVSIQATYFQLHVQNQSTSSSELPSSIDFNSSQYSQHPNWESGTTWKSALNNLRLLIQPYIFYCLIQPWLTVFNIPGMKRCFLKLINFMNDFRASPVSFSVAS
>NZ_CP011382.1|WP_035158200.1|6247360_6250999_-|magnesium-chelatase-subunit-H
MKRIVLVAGFESFNADLYRKAAEQAKSRCPELDIRVFSDRQLATDTEEVAAALQGADVFFGSLLFDYDQVLWLRDRVKNIPIRLIFESALELISLTQIGAFSIGDKPKGMPKPVKFILDKFSNGREEDKLAGYISFLKVGPKLLKFIPLGKVQDLRNWLIIYGYWNAGGTENVAALFWTIAEKYLNLPIGEIPPPIETPNMGLLHPDYQGYFDSPQAYINWYKKQLLPAASAPTVAILLYRKHVITKQPYIPQLIRRFERSGIIPLPIFINGVEGHVAVRDWLTTEYEIQQRQGGNIETPSLSSTAVLVDAIVSTIGFPLVGGPAGSMEAGRQIEVAKRILTAKNIPYFVAAPLLIQDIHSWTRQGIGGLQSVVLYALPELDGAIDTVPLGGLVGEDIYLIPERVERLINRVKNWVSLRKTPPSQRKIAVILYGFPPGYGATGTAALLNVPRSLLNFLHGLKAQGYTVGELPEDGEEIINWVKAADEKITHTVNVRQLEKWLGYLQTSRIEKQWRSLTGTGIKTSGDEFQIGGINLGNVWIGVQPPLGISGDPMRLMFERDLTPHPQYAAFYQWLQHDFQADAVVHFGMHGTVEWLPGSPLGNTGYSWSDILLGNIPNLYIYAANNPSESILAKRRGYGVLISHNVPPYGRAGLYKELLNLRELIAEYREEPEKNYVLKDAICKQIIDSGLDADCPLEEAKKLGIAFTLENIKLFSHHVFDDYLVKLYGYLQVLENRLFSSGLHVLGAVPNAENMQAYLEAYFGHQTQDNLEEEAEIRELLHRNSEELTNLLRGLNGEYIPPAPGGDLLRDGAGVLPTGRNIHALDPYRMPSPAAYARGKEIAKKIISQHLQEHGEYPETVAVMLWGLDAIKTKGESLGILLELVGAEPVKEGTGRIVRYDLQPLPEVGHPRIDVLGNLSGIFRDSFVNIIELLDDLFQRAVDIDESVEENFIKKHALELKAQGVANISARLFSNPAGDFGSLVNDRVVDGNWESGEELGDTWQGRNVFSYGRKDKGEARPEVLNTLLKTTGRIVQEIDSVEYGLTDIQEYYANTGGLKKAAEKQQGKKVTASFVESFSKDTTPRKLDDLLRMEYRSKFLNPKWAEAMANQGSGGAYEISQRMTALIGWSGTADFTDNWVYDQAADTYALNAEMAEKLRQANPEAFRNIISRMLEANGRGFWQASEDKLQQLRNLYELTDEELEGVGSNTNS
>NZ_CP011382.1|WP_035158201.1|6251136_6252513_-|cytochrome-P450
MKLPQGPQTPAIVQMLQWIARPMPYMEECAKKYGDIFTLHLSFPILFVSHPQAIQQILTSDNKDFTAPSRANQLFAPLLGKNSVITLEGEPHFRQRQLITPPFHGERMKTYTEVITKITESVMGQWRIGQSVDARAAMQAITMRVIMQAVFGLHEGERAEELERLLAIMLEEGGSSPLRAALLYIPILQQDLGTWYPWGRFLRRRQRVNELIYAEIRERRAQADTSRTDILSLLMAAQDENGVGMTDEELRDELMTLLTAGHETTATALAWALYWIHKFPEVKEKLLAELDTVPDKSDLNTLLKLPYLNAVCNETLRIYPVAMLTFPRSVKNTLTLSGHELQPGTLVMGAIYLTHQREDLYPNPKQFRPERFLERQYSPYEFVPFGGGARRCVGTAFAQLEMKLVLATILSSLNLDLATKGDILPRRRGLVTGPDRVIELVVQGQRQVKTSLLEKVSS
>NZ_CP011382.1|WP_035158202.1|6253108_6254116_+|hypothetical-protein
MDCKALIYQIGKQQVIAPIYPNYLVKWDISQEPRIIQQIELPYKFEPVPSIVLLPDGERFAVTPSEVTPEFGIEIRHWDDLSVLQTVQLPHAPYGETSLEDEYHGHQKCTHISWLGVTPCQRYLLIAEGWGDMYLVNLETGEQVRWLCRWRDYNAGFAMDAQMQFLIINSVDMDEFHHVFRIGDMLRGELSYLGEFAGGARCHRGGLGFSPDGESLAYSFYIYNRVELACLQVDRQFLASLNDFVEQPLETKWQQPWMLHHGHDSFNPWQSEIVWLDNQRLVFGVGKTLALVQAETGEVEATYNLDAVMNGMKFDPISGKMIVATKEGIGVVTIG
>NZ_CP011382.1|WP_035158203.1|6254118_6255639_-|tetratricopeptide-repeat-protein
MNGISVLRSQQLDFIQRLASSSSVLHCQVEGKHSELTVISGERLKVLRNFCWEMAEKYKQVSPVRDVFIKYLQGKLAEEVVQERLSDLITSVDYEKRLGGDGKTDFTLKFDAKIGIQVKSRRGKFNQVQWSVSAEEVANNYVIICVFVQEEINESQREYHLYLAGFLPTQMIKLNRGKINFGIEQLLYAGGLRCYLEQFHSQSLGNFSPSHSLTQNSIPSLKLAAIQAYQNQDFSRAIATYTDILEIQQQDANIYYHRGLAYLAVAEYEKAILDFLHSLNLNPHAPQVYNQMGIARYHLSDYSGAIADFSQAIILSPDHISFWKNRGDTYYLIGDNQRAIEDYGQVLQLESKQSWIDYTTLPEITLFPALSEIEYCDIQQYLNRGISRVELGYFTGAISDFNKVILENQDNKEAYYLRGNCYLEITELEMAIADYNQAIELGYKTREIYQQRSQCFYELNHLENAMADLKVAQELSTLEGNITARQNIQEMIDDLQLEMSLDELNI
>NZ_CP011382.1|WP_035159666.1|6255700_6256390_+|glycosyltransferase-family-2-protein
MLAKISVIIPTLNESVNIASTLSAIPIRHDIEVIIVDGGSTDNTVEITRQFSIKLIDSLPGRSEQMNRGATVATGEILLFLHGDTRLPSNFENMVRDAIQKPGVVAGAFTLQIDDNAPSLRWVEKGVKWRSRLFQLPYGDQAIFLTKETFEKIGGFPRIPIMEDFELIQRLKKIGKITIISASVITSPRRWLKKGIWQTTLINQIVIIAYYLGISPDRIRDWYRQGKFR

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Crispr_ID: NZ_CP011382_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP011382_19

6276594-6277573

Orphan

Consensus_repeat	Method
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	PILER-CR
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CRISPRCasFinder
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CRT

13 spacers

The CRISPR arrays of NZ_CP011382_19

>merge|NZ_CP011382|19|6276594-6277573|PILER-CR,CRISPRCasFinder,CRT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAACACGGAAAGAGCGATTAAAAGCACTGTGGAACTTTACAAACTATTCCCCTTCACCGGGGACGGAAACGATTTGACGGCAACCTTTGTTTTCCCATTTATGCACCTCATCTTTACAAACTATTCCCCTTCACCGGGGACGGAAACCAGAGAAATAGCAAATTCCACAATCCCTCCACCACAGCTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTGTAGTTCTTGCTCCTCTTCCGTCGAGAGAGAAGAGGCTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTTCAATGAGAGCCTCAACGACAGATGCTGCCGCCGCTACGACTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTAACTGTTGTCCAGCGGCCGTCATCCGAGATGGTGCTTTACAAACTATTCCCCTTCACCGGGGACGGAAACGGGTCGCTGCTGGTGAGCAGCGTGCCACCCGCCCCGGTCTTTACAAACTATTCCCCTTCACCGGGGACGGAAACGTTTTGAGAATTTCCTTTGCCTAGTTGGGCAATTCTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTGGCTGGCAGAGAATTTTTTGAAGTATTCAACAACACTTTACAAACTATTCCCCTTCACCGGGGACGGAAACCAAAGACAAAGCAGAACTAACAGAAACAAAAAGAACACTTTACAAACTATTCCCCTTCACCGGGGACGGAAACCTTGAAAACAAACGATAGAGGTTTCCTCGTTTGGTTCCTTTACAAACTATTCCCCTTCACCGGGGACGGAAACTCCCAGGTGCAGTGGGTTGCTCTCAATCTTTCGACTTTACAAACTATTCCCCTTCACCGGGGACGGAAACCCATAGGTGCCATTCGGACGCTGGGGATTGGTGAATTGCCTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC

>NZ_CP011382|19|4|6276594-6277573|PILER-CR
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	ACGGAAAGAGCGATTAAAAGCACTGTGGAA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GATTTGACGGCAACCTTTGTTTTCCCATTTATGCACCTCAT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CAGAGAAATAGCAAATTCCACAATCCCTCCACCACAG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TGTAGTTCTTGCTCCTCTTCCGTCGAGAGAGAAGAGG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TTCAATGAGAGCCTCAACGACAGATGCTGCCGCCGCTACGA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TAACTGTTGTCCAGCGGCCGTCATCCGAGATGGTG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GGGTCGCTGCTGGTGAGCAGCGTGCCACCCGCCCCGGT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GTTTTGAGAATTTCCTTTGCCTAGTTGGGCAATT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TGGCTGGCAGAGAATTTTTTGAAGTATTCAACAACA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CAAAGACAAAGCAGAACTAACAGAAACAAAAAGAACA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CTTGAAAACAAACGATAGAGGTTTCCTCGTTTGGTTC
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TCCCAGGTGCAGTGGGTTGCTCTCAATCTTTCGA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CCATAGGTGCCATTCGGACGCTGGGGATTGGTGAATTGC
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC

>NZ_CP011382|19|18|6276594-6277573|CRISPRCasFinder
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	ACGGAAAGAGCGATTAAAAGCACTGTGGAA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GATTTGACGGCAACCTTTGTTTTCCCATTTATGCACCTCAT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CAGAGAAATAGCAAATTCCACAATCCCTCCACCACAG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TGTAGTTCTTGCTCCTCTTCCGTCGAGAGAGAAGAGG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TTCAATGAGAGCCTCAACGACAGATGCTGCCGCCGCTACGA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TAACTGTTGTCCAGCGGCCGTCATCCGAGATGGTG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GGGTCGCTGCTGGTGAGCAGCGTGCCACCCGCCCCGGT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GTTTTGAGAATTTCCTTTGCCTAGTTGGGCAATT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TGGCTGGCAGAGAATTTTTTGAAGTATTCAACAACA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CAAAGACAAAGCAGAACTAACAGAAACAAAAAGAACA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CTTGAAAACAAACGATAGAGGTTTCCTCGTTTGGTTC
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TCCCAGGTGCAGTGGGTTGCTCTCAATCTTTCGA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CCATAGGTGCCATTCGGACGCTGGGGATTGGTGAATTGC
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC

>NZ_CP011382|19|5|6276594-6277573|CRT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	ACGGAAAGAGCGATTAAAAGCACTGTGGAA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GATTTGACGGCAACCTTTGTTTTCCCATTTATGCACCTCAT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CAGAGAAATAGCAAATTCCACAATCCCTCCACCACAG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TGTAGTTCTTGCTCCTCTTCCGTCGAGAGAGAAGAGG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TTCAATGAGAGCCTCAACGACAGATGCTGCCGCCGCTACGA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TAACTGTTGTCCAGCGGCCGTCATCCGAGATGGTG
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GGGTCGCTGCTGGTGAGCAGCGTGCCACCCGCCCCGGT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	GTTTTGAGAATTTCCTTTGCCTAGTTGGGCAATT
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TGGCTGGCAGAGAATTTTTTGAAGTATTCAACAACA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CAAAGACAAAGCAGAACTAACAGAAACAAAAAGAACA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CTTGAAAACAAACGATAGAGGTTTCCTCGTTTGGTTC
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	TCCCAGGTGCAGTGGGTTGCTCTCAATCTTTCGA
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC	CCATAGGTGCCATTCGGACGCTGGGGATTGGTGAATTGC
CTTTACAAACTATTCCCCTTCACCGGGGACGGAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP011382.1\|WP_035158217.1\|6270625_6271138_-\|flavodoxin-FldA	unknown	unknown	gnl\|CDD\|236439
NZ_CP011382.1\|WP_035158213.1\|6267004_6267784_+\|RDD-family-protein	unknown	unknown	gnl\|CDD\|377640
NZ_CP011382.1\|WP_035159671.1\|6267950_6268397_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_052754384.1\|6280820_6282011_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|379165
NZ_CP011382.1\|WP_035158212.1\|6265911_6266775_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035158214.1\|6268576_6268981_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP011382.1\|WP_035158211.1\|6264858_6265830_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|224219
NZ_CP011382.1\|WP_035158216.1\|6269680_6270415_-\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP011382.1\|WP_035150523.1\|6282000_6283212_+\|TniQ-family-protein	unknown	unknown	gnl\|CDD\|377670
NZ_CP011382.1\|WP_144416130.1\|6271204_6271510_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|214343
NZ_CP011382.1\|WP_035158219.1\|6272565_6276108_+\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	unknown	unknown	gnl\|CDD\|131231
NZ_CP011382.1\|WP_035158215.1\|6269261_6269567_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240845
NZ_CP011382.1\|WP_035150525.1\|6278154_6280821_+\|DDE-type-integrase/transposase/recombinase	unknown	unknown	gnl\|CDD\|366234

Protein	Function_ID	Function_description	E-value
NZ_CP011382.1\|WP_035158211.1\|6264858_6265830_-\|stage-II-sporulation-protein-M	gnl\|CDD\|224219	COG1300, SpoIIM, Uncharacterized membrane protein [Function unknown].	2.0573e-54
NZ_CP011382.1\|WP_035158217.1\|6270625_6271138_-\|flavodoxin-FldA	gnl\|CDD\|236439	PRK09267, PRK09267, flavodoxin FldA; Validated.	5.75321e-98
NZ_CP011382.1\|WP_035158216.1\|6269680_6270415_-\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	7.9436e-12
NZ_CP011382.1\|WP_035150523.1\|6282000_6283212_+\|TniQ-family-protein	gnl\|CDD\|377670	pfam06527, TniQ, TniQ. This family consists of several bacterial TniQ proteins. TniQ along with TniA and B is involved in the transposition of the mercury-resistance transposon Tn5053 which carries the mer operon. It has been suggested that the tni genes are involved in the dissemination of integrons.	4.73435e-13
NZ_CP011382.1\|WP_035158213.1\|6267004_6267784_+\|RDD-family-protein	gnl\|CDD\|377640	pfam06271, RDD, RDD family. This family of proteins contain three highly conserved amino acids: one arginine and two aspartates, hence the name of RDD family. This region contains two predicted transmembrane regions. The arginine occurs at the N-terminus of the first helix and the first aspartate occurs in the middle of this helix. The molecular function of this region is unknown. However this region may be involved in transport of an as yet unknown set of ligands (Bateman A pers. obs.).	9.77825e-19
NZ_CP011382.1\|WP_144416130.1\|6271204_6271510_-\|hypothetical-protein	gnl\|CDD\|214343	CHL00035, psbC, photosystem II 44 kDa protein.	7.99269e-18
NZ_CP011382.1\|WP_052754384.1\|6280820_6282011_+\|AAA-family-ATPase	gnl\|CDD\|379165	pfam13401, AAA_22, AAA domain.	8.12932e-05
NZ_CP011382.1\|WP_035158219.1\|6272565_6276108_+\|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase	gnl\|CDD\|131231	TIGR02176, pyruvate_flavodoxin/ferrodoxin_oxidoreductase, pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric. This model represents a single chain form of pyruvate:ferredoxin (or flavodoxin) oxidoreductase. This enzyme may transfer electrons to nitrogenase in nitrogen-fixing species. Portions of this protein are homologous to gamma subunit of the four subunit pyruvate:ferredoxin (flavodoxin) oxidoreductase.	0
NZ_CP011382.1\|WP_035158215.1\|6269261_6269567_+\|hypothetical-protein	gnl\|CDD\|240845	cd12399, RRM_HP0827_like, RNA recognition motif in Helicobacter pylori HP0827 protein and similar proteins. This subfamily corresponds to the RRM of H. pylori HP0827, a putative ssDNA-binding protein 12rnp2 precursor, containing one RNA recognition motif (RRM), also termed RBD (RNA binding domain) or RNP (ribonucleoprotein domain). The ssDNA binding may be important in activation of HP0827. .	1.26501e-31
NZ_CP011382.1\|WP_035150525.1\|6278154_6280821_+\|DDE-type-integrase/transposase/recombinase	gnl\|CDD\|366234	pfam00665, rve, Integrase core domain. Integrase mediates integration of a DNA copy of the viral genome into the host chromosome. Integrase is composed of three domains. The amino-terminal domain is a zinc binding domain pfam02022. This domain is the central catalytic domain. The carboxyl terminal domain that is a non-specific DNA binding domain pfam00552. The catalytic domain acts as an endonuclease when two nucleotides are removed from the 3' ends of the blunt-ended viral DNA made by reverse transcription. This domain also catalyzes the DNA strand transfer reaction of the 3' ends of the viral DNA to the 5' ends of the integration site.	6.88806e-09

>NZ_CP011382.1|WP_035158219.1|6272565_6276108_+|pyruvate:ferredoxin-(flavodoxin)-oxidoreductase
MQKGFATIDGNEAVARVAYRLSEVIAIYPITPSSAMSEWTDTWSADGRKNLWGTVPSVVEMQSEGGAIASVHGAIQTGSLTTTFTSSQGLLLMIPNLYKIAGELTSTVVHVAARALATHALSIFGDHSDVMAARGTGFALLCSASVQEAQDFALIAQAATLKSRVSFMHFFDGFRTSHEVQKVELLSDEDLRALIDDKLVGNHRDRALTPDNPVIRGTAQNPDVYFQAREGANTYYNQCPEIVQQVMDEFGKQTGRHYRIYEYHGAPDAERVIVIMGSGAETVHETVDYLNAQGEKLGVLKVRLFRPFDVHKLIAELPETTRAIAVLDRTKEPGSAGEPLYLDVVTAIHESPTSLRPVIVGGRYGLSSKEFTPAMVRAVFENLAQEHPKNHFTVGIQDDITHTSLPYDAGFSTEADTVVRAMFFGLGSDGTVGANKNSIKIIGEETDNYAQGYFVYDSKKSGSMTVSHLRFGSQPIRSTYLINQANFIGCHQWTFLERVDVLSGAVTGATLLVNSPYGAETVWEKLPRDVQEEIISKKLKFYVINASQVAKNSGMGGRINTIMQVCFFALAGVLPQDEAIAKIKQAIEKTYGKKGADVVQKNIQAVDNTLENLHKVDIPSTVTSKISKSALVAEHAPSFVRDVLGKMMAWQGDDLPVSALPVDGTFPTGTAKWEKRNIAEEIPGWNTDICVQCSKCVMVCPHGAIRSNIYPEGELQTAPPSFKSILAKDKDFRGQYFTIQVAPEDCTGCGVCVDVCPAQDKTQPGKKAINLQPQLPLREQERENWNFFLNLPHPDRTKLKINQIRQQQLLEPLFEFSGACAGCGETPYLKLLSQLFGDRALIANATGCSSIYGGNLPTTPWTTNSQGKGPAWSNSLFEDNAEFGFGFRLSIDKQAEYAAELLQELGNREEFRELSQAILNAEQKTEADIHAQRQRVAQLKELLQQHHISNNLLSLADYLVKKSVWIVGGDGWAYDIDFGGLDHILASGRNVNVLVMDTEVYSNTGGQSSKATPLGAIAKFAASGKPAAKKDLGLIAMSYGNIYVASVAMGAKDDQTLKAFLEAEAYDGPSLIIAYSHCIAHGINMTTGMTHQKSLVESGRWLLYRHNPTLRQQGKNPLQLDMRPPQQSVEQSMYQENRFKMLTKSKPKLAKALLQQAQAAVNERWQMYEYLASRVMSKEE
>NZ_CP011382.1|WP_144416130.1|6271204_6271510_-|hypothetical-protein
MPWWSGNARLTNLSGRLLGAYVAHTGLIVFWAGAIALFEICLFIYGSVAFSGKNPQSELPDNMKSTKAWSEFTSAWTIGGCGGALFAFLLISQGGPLLQFL
>NZ_CP011382.1|WP_035158217.1|6270625_6271138_-|flavodoxin-FldA
MSKNIGLFYGTTTGKTESVAEIIQKEFGGDIVTLVDVCQAETSDFAEYEYLIIGCPTWNIGELQSDWEGLYQELDDVDFSGKTVAYFGTGDQIGYGDNFQDAMGILEEKIAAQGGKTIGYTSTDGYDFSESKAVRDGKFCGLALDEDNQSDLTDTRIKAWVSQLKREFGI
>NZ_CP011382.1|WP_035158216.1|6269680_6270415_-|alpha/beta-hydrolase
MSNFDVLWLTASPSLKRFDLPLLRYLSTKQTVAHWEYIQSEDEASSIYQAVDLLHDFLKSSPQPVHLAGHGISGAIALLFARRYPEMVRSLSLLAVASQPANTWQAHYYTQRQIFTTSQEQILANNVRSLFGNNRPYTIETLSIALKRDLELSPCQHSLFRLIHLPKGGVSMPLLVCGSKTDPVVSSPTLHDWTNWFKPQDTLWECPGGYHFFHYFHPQEVGQKMLNFWRTQNQNLLTNSLAKC
>NZ_CP011382.1|WP_035158215.1|6269261_6269567_+|hypothetical-protein
MSIYVGNLSYQVTEESLNAVFAEYGTVKRVQLPTDRETGRLRGFGFVEMGTEAEEAAAIEALDGAEWMGRDLKVNKAKPKEDRGSFGGNRGNNRFGGGNRY
>NZ_CP011382.1|WP_035158214.1|6268576_6268981_+|hypothetical-protein
MAQLEQLLRMAEDELTEYSTDARKIEKLRRKISLAIPLVQQRQLKAELLQIMPSDQMSKIVEEQRQTVALPFWGIAGLGLLLGISLNQPVGIVASVISTVVAIRIQKWGWQLQAKRLLLQTFEDIEARISQPNS
>NZ_CP011382.1|WP_035159671.1|6267950_6268397_+|hypothetical-protein
MAHTFILEPGRWILQGSWLERDGMPISVKGLVLVAWHRDNWFTMITKLIFPGDRPEIALQYKGRLDNGKRQYTFLLQNNLLGQAEGEGWVGLDTIVQRYWVLSDRQRRSGFETLHRISDDTYYLTSGIMAGHYLISTMEGNLERQAVQ
>NZ_CP011382.1|WP_035158213.1|6267004_6267784_+|RDD-family-protein
MHIFNKIKYRTPESVELEFVLAGIGSRSWALIIDYQILGIILIGFLIVWSTVSLQLIDWLGGFVKGDKIANWLTAIFILIYYSVYSGYFVFFETIWQGQTPGKRIAKIRVIRDNGRPVSLLQSGLRALLRPIDDTLFLGAFFIAFSRREKRLGDWVAGTVVIQSQAAKKPTRLQISESSQAIAEELSQTSDLSTLLPDDFAVVREYLLRREGMSAKARSSVAKKLSSQLKAILHLENFPSSINHDIFLEAIYLAYQNHK
>NZ_CP011382.1|WP_035158212.1|6265911_6266775_+|hypothetical-protein
MSSNLGSGGFMEPLSIGNVVTAALRLYRSHFKQYLGLACQGLLWAMVPVYGWAKGHMLYGVIARMAYGELVNQPETVGMVKSQLRPRLWSFFLTQLLMGLTLFGVNFGIGIIQQILIVSIGLLAKDSPIVFGLVSLIIQLVGMVGYLWFYSRIFIPELPVGVEDMLDAGQAIARSWELTKGHVWRIQAIIVVASLITLPLMVIAMIPLFIAFTSFFVIFVPNINNVNSTPSEAAMATFFISLGIGIILILFASMLISPFWQAIKAVIYFDLRSRREGLGLKLRDYEV
>NZ_CP011382.1|WP_035158211.1|6264858_6265830_-|stage-II-sporulation-protein-M
MNIQRWIARREPNWQRLDTLLQKVEKKGLKSLNAIEIRELASLYRSVTADLARSRTQEISNTLSQNLQSLTTRAYGQIYQGSRRQEWQAVKHFYLWGLPRVIRQTFLYTALSTALFLLGAVIAWWYAWQDPTFMSLIVPEHLISKVRDDHELWMGSIVGVEPLASSNIMTNNISVSLTAVAGGITAGLSTVFLLIFNGLLIGAIGTLVAQNNLAYPFWAFVFPHGSLELPAIFFAGGGGFLIAKGLVFPGKYRRVDALKLYASQAMQLVCGIIPMLVIAGIIEGFISPNPVIPGIFKYFFGIVLFIGLVVYCNRRQETREKSS
>NZ_CP011382.1|WP_035150525.1|6278154_6280821_+|DDE-type-integrase/transposase/recombinase
MLTESELEEWSASLDLSSAQYTIIQSIRSSPPSRRVRGNAGNVVGRYPSKKMGVVIQFESHHNELARIYEMEYDPDVLEYYDQPPKIKLQYTCLNGRRIGVLHTADFFVIRSKSAGWEECKTASELSALASKMPNRYQLDSNGKWRCPPGEEFALNLGLYYVVRSDKEINWKKQRNIYFLSDYLSINLEVPREDIVKIIKIISIFPGIKLSELLEKGINPDYIYKLIADQTVYVDLDSFSLSTELERISVFVNKETAEALDISRNDIAWSPRKFLDLSHVGAIGKWDGQIWHVINVGEKSISLLSESSQIISLPNQEWRRLIEQDKFQAISNTQNSQDIQEFFKCSSVEDCIEASRRYSIISGYLQGEKADFTEVPRRTFYRWVRKWLEADKQYGCGYLGLLPKHKNQTANQGKLPVQTQKLIDEFIENDYLNVKQKGKYATYCSLRQTCIDKGLIPPSYKTFLKNLKKIPQFETKLHRQGKRIAYKNECFYWELELTTPRHGDRPFEICHIDHTELDIELVSSYSKVNLGRPWLTFLIDAYSRRILAIYLTFDPPSYRSCMMVMRECVRRYGRFPSTLVVDGGKEFESIYFETLLAAYTCTKKTRPQAKPRFGSVCERIFGTANTMLIHNLQGNTQITRNPRGVTKSVNPKNLAIWTLGSLYQNLYDWAYEFYDNKEHPALSQSPRSMFEDGFLRTGLRSHKVIKYDGNFKIFTLPTTPKGTAKVIPNNGIKINNIYYWHNIFRHPEIEKTQVPVRYDPYDMGVAYAYVDNQWVTCISQHYSSLVGHSEREIRIASEEIRQRHSCANRQFVVTASSLAEFLNKSEQQEVILLQRMQDIEAKEIYATTPNNQTPVIQTTMIEMLELPIQEPEEKELIAEDIKPYEEFW
>NZ_CP011382.1|WP_052754384.1|6280820_6282011_+|AAA-family-ATPase
MHSTSDISQEILTASDNEKINYFINFTVVHRLLKQVYEEFLDAINNPGGASLIFLFGPTGVGKTTLMAQVMKIIFEQNQALMIQDLSFLPIAGVEARSPDTGSFDWKVYYKSVLIALSEPFADYKTRTGSHRVYGNGGEQKTVKVKPNLVDLRADVEHIFQQRRLKVFLVDEAQRFAKITSGHKQQDQMDAIQSMASFTQTRHGLFGTYELLQLRNLSGQLSRRSIDIHFPRYQSENPEDIKDFQRVLKSFSFAMPLPETPDLEKHWDYFYERSIGCVGIVKDWLTQSLRKALSESSNCLSYKHLQAYAPAVSKSVRMLTEAIEGENILSSGENQVEKLRSSLGLVVRDNQNISVRDTSSHHNLSTSAETKNNRKKRRPGERKINRDIVGGGGNAL
>NZ_CP011382.1|WP_035150523.1|6282000_6283212_+|TniQ-family-protein
MLSDNFNFQSPDFTQQLNLPKRSHLYPLQPLLLGTPLTESFTSYVTRLAAIHRVPTGVLLAQELAPTISRYPVKNSNHLSNLFFHAFFSQTGAWNGTGTMALEPVLVLQKLTQQPNLKYLTLIHWQNVLSTRNLLRKYKAWCPLCYSESSQKGIMLYEPLIWCVSAVKICPIHKYPLMNYCPNCGQHIYLLAWNTKNGFCCRCHYWLGSSCSTIELYNVNRQDIEWHSFIAQQVGLLIANTPYLIEIPKREFVAIAIDKCIEVLTKGNAKAFAQEMFLSSTVPRDWRVGNALPQLDKLLRVCYRLSIPLIDIYLGQLKLDAPIYLKELPLSEQYFKTNRPFDAQMVQEFLEQHQESFPPQSLKELALQIGYDSRDLYKYFPDLCHEISTRYKLYKPKSSKPHV

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP011382_5	5.2\|2774706\|18\|NZ_CP011382\|CRT	2774706-2774723	18	NZ_CP011382.1	5865649-5865666	1	0.944
NZ_CP011382_5	5.2\|2774706\|18\|NZ_CP011382\|CRT	2774706-2774723	18	NZ_CP011382.1	5865721-5865738	1	0.944
NZ_CP011382_5	5.4\|2774802\|18\|NZ_CP011382\|CRT	2774802-2774819	18	NZ_CP011382.1	4340903-4340920	1	0.944
NZ_CP011382_5	5.4\|2774802\|18\|NZ_CP011382\|CRT	2774802-2774819	18	NZ_CP011382.1	4340927-4340944	1	0.944
NZ_CP011382_5	5.4\|2774802\|18\|NZ_CP011382\|CRT	2774802-2774819	18	NZ_CP011382.1	4341095-4341112	1	0.944
NZ_CP011382_5	5.4\|2774802\|18\|NZ_CP011382\|CRT	2774802-2774819	18	NZ_CP011382.1	4341179-4341196	1	0.944
NZ_CP011382_5	5.4\|2774802\|18\|NZ_CP011382\|CRT	2774802-2774819	18	NZ_CP011382.1	5865673-5865690	1	0.944
NZ_CP011382_5	5.4\|2774802\|18\|NZ_CP011382\|CRT	2774802-2774819	18	NZ_CP011382.1	5865733-5865750	1	0.944

1. spacer 5.2|2774706|18|NZ_CP011382|CRT matches to position: 5865649-5865666, mismatch: 1, identity: 0.944

tatggcgtggcttttggc	CRISPR spacer
tatggcgtggcgtttggc	Protospacer
*********** ******

2. spacer 5.2|2774706|18|NZ_CP011382|CRT matches to position: 5865721-5865738, mismatch: 1, identity: 0.944

tatggcgtggcttttggc	CRISPR spacer
tatggcgtggcgtttggc	Protospacer
*********** ******

3. spacer 5.4|2774802|18|NZ_CP011382|CRT matches to position: 4340903-4340920, mismatch: 1, identity: 0.944

tttggcgtggcgggaggc	CRISPR spacer
tttggcgtggcaggaggc	Protospacer
***********.******

4. spacer 5.4|2774802|18|NZ_CP011382|CRT matches to position: 4340927-4340944, mismatch: 1, identity: 0.944

tttggcgtggcgggaggc	CRISPR spacer
tttggcgtggcaggaggc	Protospacer
***********.******

5. spacer 5.4|2774802|18|NZ_CP011382|CRT matches to position: 4341095-4341112, mismatch: 1, identity: 0.944

tttggcgtggcgggaggc	CRISPR spacer
tttggcgtggcaggaggc	Protospacer
***********.******

6. spacer 5.4|2774802|18|NZ_CP011382|CRT matches to position: 4341179-4341196, mismatch: 1, identity: 0.944

tttggcgtggcgggaggc	CRISPR spacer
tttggcgtggcaggaggc	Protospacer
***********.******

7. spacer 5.4|2774802|18|NZ_CP011382|CRT matches to position: 5865673-5865690, mismatch: 1, identity: 0.944

tttggcgtggcgggaggc	CRISPR spacer
tttggcgtggcgggcggc	Protospacer
************** ***

8. spacer 5.4|2774802|18|NZ_CP011382|CRT matches to position: 5865733-5865750, mismatch: 1, identity: 0.944

tttggcgtggcgggaggc	CRISPR spacer
tttggcgtggcgggcggc	Protospacer
************** ***

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27263-27289	2	0.926
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27343-27369	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP026682	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence	164670-164696	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024790	Nostoc flagelliforme CCNUN1 plasmid pNFSY05, complete sequence	19945-19971	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	85853-85879	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	556949-556975	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	340057-340083	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	515285-515311	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP046705	Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence	241588-241614	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NC_010631	Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence	35505-35531	3	0.889
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29495-29521	4	0.852
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	30401-30427	4	0.852
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	256767-256793	4	0.852
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP011383	Calothrix sp. 336/3 plasmid unnamed1	33365-33391	4	0.852
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	AP017993	Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence	78591-78617	4	0.852
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	86002-86028	5	0.815
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	86053-86079	5	0.815
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	178836-178862	5	0.815
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	335127-335153	5	0.815
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	441615-441641	5	0.815
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	106668-106694	5	0.815
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	30408-30434	6	0.778
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	32022-32048	6	0.778
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	121363-121389	6	0.778
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	307391-307417	6	0.778
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	794804-794830	6	0.778
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	18321-18347	6	0.778
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	483500-483526	6	0.778
NZ_CP011382_5	5.1\|2774658\|30\|NZ_CP011382\|CRT	2774658-2774687	30	NZ_CP013298	Arthrobacter sp. YC-RL1 plasmid unnamed 1, complete sequence	40359-40388	6	0.8
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	28988-29014	7	0.741
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31884-31910	7	0.741
NZ_CP011382_5	5.1\|2774658\|30\|NZ_CP011382\|CRT	2774658-2774687	30	NC_013855	Azospirillum sp. B510 plasmid pAB510a, complete sequence	658611-658640	7	0.767
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	28995-29021	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29002-29028	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33600-33626	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33607-33633	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33614-33640	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33621-33647	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27308-27334	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27315-27341	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27322-27348	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27329-27355	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	27336-27362	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29488-29514	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29876-29902	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29883-29909	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29890-29916	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	30387-30413	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	30394-30420	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31102-31128	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31849-31875	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31856-31882	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31863-31889	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31870-31896	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31877-31903	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	32008-32034	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	32015-32041	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP026682	Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence	164677-164703	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	161780-161806	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	162167-162193	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	47262-47288	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	121349-121375	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	116818-116844	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	178850-178876	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	335141-335167	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	339901-339927	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	441629-441655	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	515129-515155	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	698966-698992	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	200662-200688	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	517208-517234	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	557105-557131	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	699727-699753	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	307405-307431	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	106654-106680	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024789	Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence	1055-1081	8	0.704
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	AP017993	Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence	78584-78610	8	0.704
NZ_CP011382_4	4.2\|2342924\|35\|NZ_CP011382\|CRISPRCasFinder,CRT,PILER-CR	2342924-2342958	35	CP051000	Escherichia coli O39:NM str. F8704-2 plasmid pF8704-2_3, complete sequence	48813-48847	8	0.771
NZ_CP011382_5	5.1\|2774658\|30\|NZ_CP011382\|CRT	2774658-2774687	30	NZ_CP017148	Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence	124450-124479	8	0.733
NZ_CP011382_13	13.1\|4816416\|31\|NZ_CP011382\|CRISPRCasFinder	4816416-4816446	31	KM389306	UNVERIFIED: Escherichia phage Phi06_2974 B clone contig00001 genomic sequence	15138-15168	8	0.742
NZ_CP011382_15	15.2\|5769232\|38\|NZ_CP011382\|CRISPRCasFinder	5769232-5769269	38	NZ_CP025033	Staphylococcus haemolyticus strain SGAir0252 plasmid pSGAir0252, complete sequence	2560-2597	8	0.789
NZ_CP011382_19	19.1\|6276630\|30\|NZ_CP011382\|PILER-CR,CRISPRCasFinder,CRT	6276630-6276659	30	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	227592-227621	8	0.733
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	33593-33619	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	31109-31135	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP051207	Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence	29897-29923	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	161773-161799	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	47269-47295	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	121356-121382	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024791	Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence	162174-162200	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	116811-116837	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	178843-178869	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	307398-307424	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	329664-329690	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	335134-335160	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	339894-339920	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	441622-441648	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	515122-515148	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	516814-516840	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	698959-698985	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	106661-106687	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	200669-200695	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	517215-517241	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	557112-557138	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024793	Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence	699734-699760	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_AP017564	Pseudanabaena sp. ABRG5-3 plasmid ABRG53d, complete sequence	27221-27247	9	0.667
NZ_CP011382_1	1.1\|321406\|27\|NZ_CP011382\|CRISPRCasFinder	321406-321432	27	NZ_CP024789	Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence	1062-1088	9	0.667
NZ_CP011382_5	5.1\|2774658\|30\|NZ_CP011382\|CRT	2774658-2774687	30	NC_011961	Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence	253411-253440	9	0.7
NZ_CP011382_15	15.2\|5769232\|38\|NZ_CP011382\|CRISPRCasFinder	5769232-5769269	38	DQ535032	Lactococcus lactis phage KSY1, complete genome	20567-20604	11	0.711
NZ_CP011382_15	15.2\|5769232\|38\|NZ_CP011382\|CRISPRCasFinder	5769232-5769269	38	NC_009817	Lactococcus phage KSY1, complete genome	20567-20604	11	0.711

1. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 2, identity: 0.926

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
cgcgaacgtaattcgtaattcgtaatt	Protospacer
*** **********************

2. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ctaattcgtaattcgtaattcgtaatt	Protospacer
  ****  ********************

3. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP026682 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--gtaattcgtaattcgtaattcgtaatg	Protospacer
   ***  *********************

4. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024790 (Nostoc flagelliforme CCNUN1 plasmid pNFSY05, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ctaattcgtaattcgtaattcgtaatt	Protospacer
  ****  ********************

5. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ctaattcgtaattcgtaattcgtaatt	Protospacer
  ****  ********************

6. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ctaattcgtaattcgtaattcgtaatt	Protospacer
  ****  ********************

7. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ctaattcgtaattcgtaattcgtaatt	Protospacer
  ****  ********************

8. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ctaattcgtaattcgtaattcgtaatt	Protospacer
  ****  ********************

9. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP046705 (Nostoc sp. ATCC 53789 plasmid pNsp_b, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ctaattcgtaattcgtaattcgtaatt	Protospacer
  ****  ********************

10. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NC_010631 (Nostoc punctiforme PCC 73102 plasmid pNPUN01, complete sequence) position: , mismatch: 3, identity: 0.889

cgctaacgtaattcgtaattcgtaatg-	CRISPR spacer
cgctaacgtaattcgtaa-tagtaattt	Protospacer
****************** * *****

11. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 4, identity: 0.852

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ttaattcgtaattcgtaattcgtaatt	Protospacer
  .***  ********************

12. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 4, identity: 0.852

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ttaattcgtaattcgtaattcgtaatt	Protospacer
  .***  ********************

13. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 4, identity: 0.852

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
ggttaaaataattcgtaattcgtaatg	Protospacer
 *.*** .*******************

14. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP011383 (Calothrix sp. 336/3 plasmid unnamed1) position: , mismatch: 4, identity: 0.852

cgctaa--cgtaattcgtaattcgtaatg	CRISPR spacer
--ccaattcgtaattcgtaattcgtaatt	Protospacer
  *.**  ********************

15. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to AP017993 (Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence) position: , mismatch: 4, identity: 0.852

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
ccctttcgtaattcgtaattcgtaatt	Protospacer
* **  ********************

16. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 5, identity: 0.815

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
cgctaacgtaattcgtaattattaccc	Protospacer
********************  ** .

17. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 5, identity: 0.815

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
tgtcaaaataattcgtaattcgtaatg	Protospacer
.*..** .*******************

18. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 5, identity: 0.815

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
cattaaaataattcgtaattcgtaatt	Protospacer
*..*** .******************

19. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 5, identity: 0.815

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
cattaaaataattcgtaattcgtaatt	Protospacer
*..*** .******************

20. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 5, identity: 0.815

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
agttaaaataattcgtaattcgtaatt	Protospacer
 *.*** .******************

21. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 5, identity: 0.815

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
ggttaaaataattcgtaattcgtaatt	Protospacer
 *.*** .******************

22. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 6, identity: 0.778

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
taataaattaattcgtaattcgtaatt	Protospacer
.. ***  ******************

23. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 6, identity: 0.778

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
cctttcggtaattcgtaattcgtaatt	Protospacer
* .*   *******************

24. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 6, identity: 0.778

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
tattaaaataattcgtaattcgtaatt	Protospacer
...*** .******************

25. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.778

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
tattaaaataattcgtaattcgtaatt	Protospacer
...*** .******************

26. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.778

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
atcacagataattcgtaattcgtaatg	Protospacer
  *  * .*******************

27. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.778

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
atcacagataattcgtaattcgtaatg	Protospacer
  *  * .*******************

28. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 6, identity: 0.778

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
atcacagataattcgtaattcgtaatg	Protospacer
  *  * .*******************

29. spacer 5.1|2774658|30|NZ_CP011382|CRT matches to NZ_CP013298 (Arthrobacter sp. YC-RL1 plasmid unnamed 1, complete sequence) position: , mismatch: 6, identity: 0.8

---tttggcgtggcggtcggcgtggcttatggc	CRISPR spacer
ggggctggc---gcggtcggcgtggcttctggc	Protospacer
    .****   **************** ****

30. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 7, identity: 0.741

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
accgggggtaattcgtaattcgtaatt	Protospacer
  * .. *******************

31. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 7, identity: 0.741

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
aacccttgtaattcgtaattcgtaatt	Protospacer
 .*.  .*******************

32. spacer 5.1|2774658|30|NZ_CP011382|CRT matches to NC_013855 (Azospirillum sp. B510 plasmid pAB510a, complete sequence) position: , mismatch: 7, identity: 0.767

tttggcgtggcggtcggcgtggcttatggc	CRISPR spacer
gtaaaggcggcggtcggcgaggcttatggc	Protospacer
 * .. *.*********** **********

33. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

34. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

35. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

36. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

37. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

38. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

39. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaata	Protospacer
       *******************

40. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

41. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

42. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

43. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

44. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

45. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

46. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

47. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

48. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

49. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

50. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

51. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

52. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

53. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

54. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

55. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

56. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

57. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

58. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP026682 (Nostoc sp. 'Peltigera membranacea cyanobiont' N6 plasmid pNPM1, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg	CRISPR spacer
gtagggagtaattcgtaattcgtaatt	Protospacer
    .. *******************

59. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

60. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

61. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaaat	Protospacer
       *******************

62. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaaat	Protospacer
       *******************

63. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

64. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

65. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

66. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

67. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

68. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

69. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

70. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

71. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

72. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

73. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

74. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaaat	Protospacer
       *******************

75. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaaat	Protospacer
       *******************

76. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024789 (Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

77. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to AP017993 (Planktothrix agardhii NIES-204 plasmid plasmid2 DNA, complete sequence) position: , mismatch: 8, identity: 0.704

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattcgtaattcgtaattcgtaatt	Protospacer
       *******************

78. spacer 4.2|2342924|35|NZ_CP011382|CRISPRCasFinder,CRT,PILER-CR matches to CP051000 (Escherichia coli O39:NM str. F8704-2 plasmid pF8704-2_3, complete sequence) position: , mismatch: 8, identity: 0.771

ctggacaataatattattcagcaaaatccatgggc-----	CRISPR spacer
ctggacaattatataattcagcaa-----atggtccgatg	Protospacer
********* **** *********     **** *

79. spacer 5.1|2774658|30|NZ_CP011382|CRT matches to NZ_CP017148 (Bosea vaviloviae strain Vaf18 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

tttggcgtggcggtcggcgtggcttatggc	CRISPR spacer
gacggcgtggcggtcggcgttgctcagcgg	Protospacer
  .***************** ***.*  *

80. spacer 13.1|4816416|31|NZ_CP011382|CRISPRCasFinder matches to KM389306 (UNVERIFIED: Escherichia phage Phi06_2974 B clone contig00001 genomic sequence) position: , mismatch: 8, identity: 0.742

ggtttctg----ccacttcgatttcacttgcggca	CRISPR spacer
----ccagaaaccctcttcgatttcactggcggca	Protospacer
    .* *    ** ************* ******

81. spacer 15.2|5769232|38|NZ_CP011382|CRISPRCasFinder matches to NZ_CP025033 (Staphylococcus haemolyticus strain SGAir0252 plasmid pSGAir0252, complete sequence) position: , mismatch: 8, identity: 0.789

gtttgatttcctcctttttgattttgtttttagctctt	CRISPR spacer
ccttttgtacctccttttgtattttgtttttagctctt	Protospacer
 .**   * *********  ******************

82. spacer 19.1|6276630|30|NZ_CP011382|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.733

acggaaagagcgattaaaagcactgtggaa	CRISPR spacer
agtacacaggcgattaaaagcgctgtggaa	Protospacer
*  . * ..************.********

83. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

84. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

85. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP051207 (Dolichospermum flos-aquae CCAP 1403/13F plasmid pAfl69, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtaattggtaattcgtaattcgtaatt	Protospacer
       ****** ************

86. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

87. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

88. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

89. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024791 (Nostoc flagelliforme CCNUN1 plasmid pNFSY06, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

90. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

91. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

92. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

93. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------gtagttcgtaattcgtaattcgtaatt	Protospacer
       ***.***************

94. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

95. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

96. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

97. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

98. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

99. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

100. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

101. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

102. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

103. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

104. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024793 (Nostoc flagelliforme CCNUN1 plasmid pNFSY08, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

105. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_AP017564 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53d, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

106. spacer 1.1|321406|27|NZ_CP011382|CRISPRCasFinder matches to NZ_CP024789 (Nostoc flagelliforme CCNUN1 plasmid pNFSY04, complete sequence) position: , mismatch: 9, identity: 0.667

cgctaacgtaattcgtaattcgtaatg-------	CRISPR spacer
-------ataattcgtaattcgtaattcgtaatt	Protospacer
       .******************

107. spacer 5.1|2774658|30|NZ_CP011382|CRT matches to NC_011961 (Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.7

tttggcgtggcggtcggcgtggcttatggc	CRISPR spacer
cgcacggtgccggtcggcgtggcttatctc	Protospacer
. ..  *** *****************  *

108. spacer 15.2|5769232|38|NZ_CP011382|CRISPRCasFinder matches to DQ535032 (Lactococcus lactis phage KSY1, complete genome) position: , mismatch: 11, identity: 0.711

gtttgatttcctcctttttgattttgtttttagctctt	CRISPR spacer
ttttgatttgctccttgttgattttgttgagtatttct	Protospacer
 ******** ****** ***********    ..*..*

109. spacer 15.2|5769232|38|NZ_CP011382|CRISPRCasFinder matches to NC_009817 (Lactococcus phage KSY1, complete genome) position: , mismatch: 11, identity: 0.711

gtttgatttcctcctttttgattttgtttttagctctt	CRISPR spacer
ttttgatttgctccttgttgattttgttgagtatttct	Protospacer
 ******** ****** ***********    ..*..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

702685 : 782318

Planktothrix_phage(18.18%)

protease,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035149869.1\|702685_702976_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_035149871.1\|703026_703548_-	photosystem I assembly protein Ycf3	NA	NA	NA	NA
WP_035149872.1\|703733_704408_-	SOS response-associated peptidase	C7BGE4	Burkholderia_phage	1.0e-14	34.1
WP_035158320.1\|704626_705262_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_035149874.1\|705352_705577_-	DUF167 domain-containing protein	NA	NA	NA	NA
WP_035149875.1\|705554_705971_-	DUF2809 domain-containing protein	NA	NA	NA	NA
WP_035149878.1\|706599_708927_+	hypothetical protein	NA	NA	NA	NA
WP_035149880.1\|709146_710280_+	hypothetical protein	NA	NA	NA	NA
WP_035149882.1\|710529_710943_+	fatty-acid oxidation protein subunit alpha	NA	NA	NA	NA
WP_035149885.1\|710930_711266_+	XisI protein	NA	NA	NA	NA
WP_035149889.1\|711537_713064_-	ferredoxin:protochlorophyllide reductase (ATP-dependent) subunit B	NA	NA	NA	NA
WP_035149892.1\|713490_714672_-	cupin domain-containing protein	NA	NA	NA	NA
WP_035149897.1\|715610_715976_-	DUF1818 family protein	NA	NA	NA	NA
WP_035149900.1\|716071_717625_+	DUF697 domain-containing protein	NA	NA	NA	NA
WP_035149903.1\|717989_718502_+	CAP domain-containing protein	NA	NA	NA	NA
WP_035149905.1\|718721_721271_-	hypothetical protein	NA	NA	NA	NA
WP_035149908.1\|721503_721890_+	hypothetical protein	NA	NA	NA	NA
WP_168163407.1\|721933_722071_-	hypothetical protein	NA	NA	NA	NA
WP_035158321.1\|722127_722364_+	hypothetical protein	NA	NA	NA	NA
WP_035149910.1\|722455_723286_+	hypothetical protein	NA	NA	NA	NA
WP_035149912.1\|723738_724428_+	hypothetical protein	NA	NA	NA	NA
WP_035149915.1\|730075_731878_-	molybdate ABC transporter permease subunit	G9BWD6	Planktothrix_phage	3.2e-15	29.9
WP_035149918.1\|732132_734697_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	5.5e-202	45.9
WP_035149921.1\|735659_736598_-	prolyl aminopeptidase	NA	NA	NA	NA
WP_046814701.1\|736836_737331_+	hypothetical protein	NA	NA	NA	NA
WP_035158323.1\|737362_738211_-	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_035149926.1\|738400_738706_+	hypothetical protein	NA	NA	NA	NA
WP_035149929.1\|739355_740345_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA
WP_035149931.1\|740451_741063_-	30S ribosomal protein S4	NA	NA	NA	NA
WP_052754365.1\|741342_741861_-	hypothetical protein	NA	NA	NA	NA
WP_052754366.1\|741914_743567_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_035149933.1\|743601_744159_-	hypothetical protein	NA	NA	NA	NA
WP_035149937.1\|745265_746207_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_035149940.1\|746701_747850_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_144415971.1\|748197_749469_-	proton extrusion protein PcxA	NA	NA	NA	NA
WP_035149942.1\|749734_750406_-	carbonic anhydrase	NA	NA	NA	NA
WP_082127244.1\|750928_752152_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_035149944.1\|752197_752683_+	META domain-containing protein	NA	NA	NA	NA
WP_035149946.1\|752839_753871_+	hypothetical protein	NA	NA	NA	NA
WP_035149947.1\|753950_754553_+	Uma2 family endonuclease	NA	NA	NA	NA
WP_035149950.1\|754725_755835_-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	A0A0K0KVL7	Prochlorococcus_phage	4.1e-29	26.8
WP_052754367.1\|756689_758513_-	S8 family serine peptidase	A0A217EQY2	Bacillus_phage	1.2e-44	42.6
WP_035149952.1\|758850_760731_-	ABC transporter ATP-binding protein	F2Y302	Organic_Lake_phycodnavirus	6.2e-09	26.8
WP_046814702.1\|761083_761914_+	Fic family protein	K7WHW6	White_spot_syndrome_virus	4.8e-06	25.7
WP_035149954.1\|762056_763742_-	chaperonin GroEL	A0A240F779	uncultured_virus	1.3e-162	55.5
WP_035149960.1\|763941_765054_+	undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA
WP_035149962.1\|765748_766615_+	stearoyl-CoA 9-desaturase	NA	NA	NA	NA
WP_168163408.1\|766611_766767_-	hypothetical protein	NA	NA	NA	NA
WP_035149964.1\|766770_767982_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_144415972.1\|768424_769115_+\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	8.3e-20	29.5
WP_035149965.1\|769339_770323_+\|protease	trypsin-like serine protease	NA	NA	NA	NA
WP_035149967.1\|770406_771936_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_035149969.1\|771952_772723_-	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	3.6e-24	37.8
WP_035149971.1\|772810_773350_-\|transposase	transposase	NA	NA	NA	NA
WP_035158330.1\|773869_776044_-	DNA phosphorothioation-associated putative methyltransferase	NA	NA	NA	NA
WP_046814703.1\|776174_777116_+	DUF4007 family protein	NA	NA	NA	NA
WP_035149974.1\|779659_781177_-	hypothetical protein	Q332K5	Clostridium_botulinum_C_phage	9.9e-34	28.1
WP_035149977.1\|781266_781707_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_035149979.1\|781778_782318_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

825612 : 864588

Faustovirus(20.0%)

tail,transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035150025.1\|825612_826470_+\|transposase	IS982 family transposase	NA	NA	NA	NA
WP_035150027.1\|826518_827997_+	amidase	NA	NA	NA	NA
WP_035150030.1\|827988_828432_-	NADAR family protein	A0A141ZK81	Faustovirus	6.2e-37	52.5
WP_035150032.1\|828544_829384_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_035158355.1\|829409_829799_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.8e-16	41.2
WP_035150035.1\|829857_830259_-	hypothetical protein	NA	NA	NA	NA
WP_035150037.1\|830470_830863_-	phasin family protein	NA	NA	NA	NA
WP_035158357.1\|831040_831307_-	hypothetical protein	NA	NA	NA	NA
WP_035150040.1\|831668_832736_-	hypothetical protein	NA	NA	NA	NA
WP_052754371.1\|832745_834602_-	WD40 repeat domain-containing protein	NA	NA	NA	NA
WP_035150042.1\|834598_835987_-	XRE family transcriptional regulator	NA	NA	NA	NA
WP_035150044.1\|836205_836496_+	hypothetical protein	NA	NA	NA	NA
WP_035158360.1\|836597_837107_+	DUF4365 domain-containing protein	NA	NA	NA	NA
WP_035150047.1\|837106_837400_+	hypothetical protein	NA	NA	NA	NA
WP_144415974.1\|837474_838017_+	hypothetical protein	NA	NA	NA	NA
WP_052754372.1\|838032_840567_-	hypothetical protein	NA	NA	NA	NA
WP_035150052.1\|840568_842716_-	hypothetical protein	NA	NA	NA	NA
WP_035150053.1\|842858_844256_-	HAMP domain-containing protein	NA	NA	NA	NA
WP_035150056.1\|844453_845776_-	hypothetical protein	NA	NA	NA	NA
WP_046814711.1\|845744_846818_-\|tail	phage tail protein	NA	NA	NA	NA
WP_035150058.1\|846972_849168_-\|plate	putative baseplate assembly protein	NA	NA	NA	NA
WP_035150061.1\|849244_849643_-	GPW/gp25 family protein	I6X2V8	Vibriophage	6.0e-07	32.6
WP_035150063.1\|852829_853357_+	hypothetical protein	NA	NA	NA	NA
WP_035150065.1\|853535_853841_+	hypothetical protein	NA	NA	NA	NA
WP_035150067.1\|853827_854124_+	hypothetical protein	NA	NA	NA	NA
WP_035150069.1\|854602_854839_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA
WP_035150072.1\|855123_856995_+	hypothetical protein	NA	NA	NA	NA
WP_035150075.1\|857089_857299_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_035158364.1\|857339_859304_-	ATP-binding protein	K9MCS8	Sulfolobus_virus	1.6e-07	31.4
WP_035150077.1\|859303_859531_-	hypothetical protein	NA	NA	NA	NA
WP_035150078.1\|859548_860820_-	DUF4255 domain-containing protein	NA	NA	NA	NA
WP_168163409.1\|861495_861648_-	hypothetical protein	NA	NA	NA	NA
WP_035150080.1\|861757_863470_+\|tail	phage tail sheath family protein	A0A127AW39	Bacillus_phage	1.6e-19	30.5
WP_035150082.1\|863555_864029_+\|tail	phage tail protein	NA	NA	NA	NA
WP_035150084.1\|864114_864588_+\|tail	phage tail protein	NA	NA	NA	NA

DBSCAN-SWA_3

4452965 : 4521661

Bacillus_virus(28.57%)

holin,protease,transposase,integrase

attL 4452819:4452878|attR 4521847:4523286

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
4452819:4452878	attL	NA	NA	NA	NA
WP_144416115.1\|4452965_4454216_+\|transposase	IS701 family transposase	NA	NA	NA	NA
WP_168163501.1\|4454352_4454508_+	hypothetical protein	NA	NA	NA	NA
WP_046814860.1\|4454581_4454962_+	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA
WP_082127446.1\|4455001_4456201_+\|transposase	ISAzo13 family transposase	NA	NA	NA	NA
WP_046815030.1\|4456533_4457019_+	hypothetical protein	NA	NA	NA	NA
WP_035155400.1\|4460992_4461955_+	ribonuclease Z	NA	NA	NA	NA
WP_035155402.1\|4462257_4465536_+	molecular chaperone	NA	NA	NA	NA
WP_035155405.1\|4465665_4465890_+	hypothetical protein	NA	NA	NA	NA
WP_035155407.1\|4465879_4466257_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_035155410.1\|4466740_4467727_+	hypothetical protein	NA	NA	NA	NA
WP_082127352.1\|4467680_4468895_-	MFS transporter	NA	NA	NA	NA
WP_046815031.1\|4469802_4470252_+	hypothetical protein	NA	NA	NA	NA
WP_035155415.1\|4470462_4470642_+	hypothetical protein	NA	NA	NA	NA
WP_052754492.1\|4470712_4471255_+	DUF3592 domain-containing protein	NA	NA	NA	NA
WP_035155418.1\|4471487_4472096_+	hypothetical protein	NA	NA	NA	NA
WP_035155420.1\|4472202_4472622_-	hypothetical protein	NA	NA	NA	NA
WP_082127354.1\|4473103_4474768_+	two-component sensor histidine kinase	NA	NA	NA	NA
WP_035155422.1\|4475251_4476037_-	hypothetical protein	NA	NA	NA	NA
WP_035155424.1\|4476270_4477860_-\|protease	M48 family metalloprotease	NA	NA	NA	NA
WP_035155426.1\|4478206_4478920_+	hypothetical protein	NA	NA	NA	NA
WP_168163502.1\|4479142_4479298_+	hypothetical protein	NA	NA	NA	NA
WP_082127355.1\|4479783_4481238_+	hypothetical protein	NA	NA	NA	NA
WP_035155428.1\|4481355_4483464_+	protein kinase	A0A0H4Y184	Salmon_gill_poxvirus	1.0e-12	28.6
WP_035155430.1\|4483559_4483847_+	hypothetical protein	NA	NA	NA	NA
WP_035159295.1\|4483883_4484102_+	hypothetical protein	NA	NA	NA	NA
WP_035155432.1\|4484122_4484407_+	plasmid stabilization protein	NA	NA	NA	NA
WP_168163503.1\|4484437_4484575_+	hypothetical protein	NA	NA	NA	NA
WP_035159297.1\|4484605_4484923_+	DUF433 domain-containing protein	NA	NA	NA	NA
WP_168163504.1\|4485331_4485472_-	hypothetical protein	NA	NA	NA	NA
WP_035155435.1\|4485504_4486002_+	cupin domain-containing protein	NA	NA	NA	NA
WP_035155438.1\|4486205_4487735_-	SagB/ThcOx family dehydrogenase	NA	NA	NA	NA
WP_035155441.1\|4488290_4491317_+	SMC family ATPase	G3MAB6	Bacillus_virus	5.4e-23	36.3
WP_035159299.1\|4491507_4493085_+\|holin	choline dehydrogenase	A0A1V0S9J5	Catovirus	8.9e-78	34.5
WP_035155443.1\|4493292_4494780_+	aldehyde dehydrogenase	NA	NA	NA	NA
WP_082127356.1\|4494817_4495201_+	SnoaL-like domain-containing protein	NA	NA	NA	NA
WP_144416117.1\|4495715_4497224_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_035155454.1\|4497277_4497967_-	manganese catalase family protein	NA	NA	NA	NA
WP_035155457.1\|4498442_4498676_-	Nif11-like leader peptide family natural product precursor	NA	NA	NA	NA
WP_035155459.1\|4499812_4500775_+	hydrogenase small subunit	NA	NA	NA	NA
WP_035155461.1\|4500807_4501392_+	nickel-dependent hydrogenase large subunit	NA	NA	NA	NA
WP_052754494.1\|4501659_4502193_-	hypothetical protein	NA	NA	NA	NA
WP_035155463.1\|4502444_4503569_-	AAA family ATPase	G3MAX6	Bacillus_virus	2.9e-54	41.2
WP_035155465.1\|4504035_4504998_+	Red carotenoid-binding protein	NA	NA	NA	NA
WP_046814861.1\|4505128_4505482_+	hypothetical protein	NA	NA	NA	NA
WP_035155469.1\|4506037_4506412_-	hypothetical protein	NA	NA	NA	NA
WP_168163505.1\|4506676_4506988_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_168163506.1\|4507322_4507463_+	hypothetical protein	NA	NA	NA	NA
WP_035155473.1\|4507536_4507929_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_035155475.1\|4507933_4508401_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_144416118.1\|4508589_4509276_-	DUF1768 domain-containing protein	A0A1X7QH77	Faustovirus	2.5e-32	50.4
WP_035155478.1\|4509700_4511221_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_035155480.1\|4512704_4519313_-	PAS domain S-box protein	A0A1V0SGX0	Hokovirus	1.1e-36	28.5
WP_035155482.1\|4519671_4520451_-	ATP-grasp domain-containing protein	A0A292GL82	Xanthomonas_phage	2.8e-24	26.8
WP_035152459.1\|4520588_4521089_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_144416022.1\|4521109_4521661_+\|transposase	IS630 family transposase	NA	NA	NA	NA
4521847:4523286	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP011383

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP011382

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection