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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009044 Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence 1 crisprs cas4 0 2 0 0
NZ_CP009043 Campylobacter iguaniorum strain 1485E chromosome, complete genome 6 crisprs cas7,cas5,cas3,cas4,cas2,cas1,DEDDh,WYL,csa3 0 31 0 0

Results visualization

1. NZ_CP009044
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009044_1 52523-52656 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009044_1 1.1|52546|41|NZ_CP009044|CRISPRCasFinder 52546-52586 41 NZ_CP009044 Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence 52546-52586 0 1.0
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_CP009044 Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence 52610-52633 0 1.0
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_KY940428 UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence 133684-133707 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_CP040652 Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain SA20070548 plasmid pSA20070548.1, complete sequence 53784-53807 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_CP041978 Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence 38812-38835 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 CP041980 Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence 23206-23229 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_CP026579 Escherichia coli strain WCHEC005237 plasmid pRmtB1_005237, complete sequence 87309-87332 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_CP027200 Escherichia coli strain WCHEC025943 plasmid p2_025943, complete sequence 64557-64580 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_CP020510 Escherichia coli strain 165 plasmid unnamed1, complete sequence 45198-45221 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_CP047086 Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence 62054-62077 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NC_005707 Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence 13102-13125 4 0.833
NZ_CP009044_1 1.2|52610|24|NZ_CP009044|CRISPRCasFinder 52610-52633 24 NZ_CP040319 Salmonella enterica subsp. enterica serovar Rough O:-:- strain PNCS009887 plasmid p11-0883.1, complete sequence 12447-12470 4 0.833

1. spacer 1.1|52546|41|NZ_CP009044|CRISPRCasFinder matches to NZ_CP009044 (Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence) position: , mismatch: 0, identity: 1.0

aaaaccattaaaaatctatgattttattaacctctttagag	CRISPR spacer
aaaaccattaaaaatctatgattttattaacctctttagag	Protospacer
*****************************************

2. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_CP009044 (Campylobacter iguaniorum strain 1485E plasmid pCIG1485E, complete sequence) position: , mismatch: 0, identity: 1.0

ctaaaataaatccttactgtatat	CRISPR spacer
ctaaaataaatccttactgtatat	Protospacer
************************

3. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_KY940428 (UNVERIFIED: Bacillus sp. (in: Bacteria) strain PUMK-07 plasmid pMK-07, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
tgaaaataaatccttattgtataa	Protospacer
. **************.****** 

4. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_CP040652 (Salmonella enterica subsp. enterica serovar 1,4,[5],12:i:- strain SA20070548 plasmid pSA20070548.1, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
gtaaaataaatccttactgcatta	Protospacer
 ******************.**  

5. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_CP041978 (Bacillus pacificus strain NCCP 15909 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
tgaaaataaatccttattgtataa	Protospacer
. **************.****** 

6. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to CP041980 (Bacillus paranthracis strain NCCP 15910 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
tgaaaataaatccttattgtataa	Protospacer
. **************.****** 

7. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_CP026579 (Escherichia coli strain WCHEC005237 plasmid pRmtB1_005237, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
gtaaaataaatccttactgcatta	Protospacer
 ******************.**  

8. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_CP027200 (Escherichia coli strain WCHEC025943 plasmid p2_025943, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
gtaaaataaatccttactgcatta	Protospacer
 ******************.**  

9. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_CP020510 (Escherichia coli strain 165 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
gtaaaataaatccttactgcatta	Protospacer
 ******************.**  

10. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_CP047086 (Bacillus paranthracis strain BC307 plasmid pCE1, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
tgaaaataaatccttattgtataa	Protospacer
. **************.****** 

11. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NC_005707 (Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
tgaaaataaatccttattgtataa	Protospacer
. **************.****** 

12. spacer 1.2|52610|24|NZ_CP009044|CRISPRCasFinder matches to NZ_CP040319 (Salmonella enterica subsp. enterica serovar Rough O:-:- strain PNCS009887 plasmid p11-0883.1, complete sequence) position: , mismatch: 4, identity: 0.833

ctaaaataaatccttactgtatat	CRISPR spacer
gtaaaataaatccttactgcatta	Protospacer
 ******************.**  

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP009043
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009043_1 8958-9060 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009043_2 465246-465348 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009043_3 649632-655416 Orphan NA
88 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009043_4 696886-706722 Orphan NA
150 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009043_5 1575644-1575754 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009043_6 1575860-1576050 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009043_3 3.77|654628|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654628-654662 35 NZ_CP007000 Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP1, complete sequence 50355-50389 1 0.971
NZ_CP009043_5 5.1|1575685|28|NZ_CP009043|CRISPRCasFinder 1575685-1575712 28 NC_007110 Rickettsia felis URRWXCal2 plasmid pRF, complete sequence 45347-45374 5 0.821
NZ_CP009043_5 5.1|1575685|28|NZ_CP009043|CRISPRCasFinder 1575685-1575712 28 NC_007111 Rickettsia felis URRWXCal2 plasmid pRFdelta, complete sequence 21781-21808 5 0.821
NZ_CP009043_5 5.1|1575685|28|NZ_CP009043|CRISPRCasFinder 1575685-1575712 28 NC_019229 Rickettsia felis plasmid pRF, complete sequence 45370-45397 5 0.821
NZ_CP009043_3 3.62|653646|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 653646-653680 35 NC_029073 Geobacillus virus E3, complete genome 101169-101203 6 0.829
NZ_CP009043_4 4.23|698357|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 698357-698390 34 NC_028763 Polaribacter phage P12002S, complete genome 16496-16529 6 0.824
NZ_CP009043_5 5.1|1575685|28|NZ_CP009043|CRISPRCasFinder 1575685-1575712 28 MN694782 Marine virus AFVG_250M435, complete genome 35350-35377 6 0.786
NZ_CP009043_3 3.25|651227|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 651227-651263 37 CP033524 Acinetobacter pittii strain 2012N08-034 plasmid p2012N08-034-4, complete sequence 670-706 7 0.811
NZ_CP009043_3 3.72|654298|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654298-654331 34 AP017992 Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence 93843-93876 7 0.794
NZ_CP009043_4 4.92|702871|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702871-702905 35 MN693322 Marine virus AFVG_25M496, complete genome 6460-6494 7 0.8
NZ_CP009043_4 4.147|706459|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 706459-706492 34 NZ_CP021876 Enterococcus wangshanyuanii strain MN05 plasmid unnamed3 141614-141647 7 0.794
NZ_CP009043_6 6.1|1575901|34|NZ_CP009043|CRISPRCasFinder 1575901-1575934 34 MN694682 Marine virus AFVG_250M291, complete genome 13858-13891 7 0.794
NZ_CP009043_6 6.1|1575901|34|NZ_CP009043|CRISPRCasFinder 1575901-1575934 34 MN694060 Marine virus AFVG_250M294, complete genome 28172-28205 7 0.794
NZ_CP009043_3 3.41|652269|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 652269-652303 35 NZ_CP050172 Serratia fonticola strain CPSE11 plasmid plas1, complete sequence 81497-81531 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 HE858210 Enterobacteria phage RB43, isolate RB43-GVA complete genome 27891-27925 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 MN508623 UNVERIFIED: Enterobacter phage EC-F1, complete genome 102960-102994 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 MN508624 UNVERIFIED: Enterobacter phage EC-F2, complete genome 103528-103562 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 MH823906 Citrobacter phage Maroon, complete genome 27563-27597 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 KM236237 Citrobacter phage Miller, complete genome 27674-27708 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 LC589952 Enterobacter phage vB_EkoM5VN DNA, complete genome 76510-76544 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 KX431560 Cronobacter phage vB_CsaM_leN, complete genome 27095-27129 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 MT334653 Buttiauxella phage vB_ButM_GuL6, complete genome 26599-26633 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 HE981739 Enterobacteria phage RB43, isolate RB43-GVA orf057::gfp complete genome 27891-27925 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 NC_048646 Cronobacter phage vB_CsaM_leE, complete genome 27095-27129 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 MN508621 UNVERIFIED: Enterobacter phage EC-W1, complete genome 43210-43244 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 MT341500 Enterobacter phage EBPL, complete genome 29448-29482 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 JN882287 Cronobacter phage vB_CsaM_GAP161, complete genome 26778-26812 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 NC_031057 Citrobacter phage vB_CfrM_CfP1, complete genome 29893-29927 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 MN508622 UNVERIFIED: Enterobacter phage EC-W2, complete genome 22648-22682 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 NC_029013 Citrobacter phage IME-CF2, complete genome 91051-91085 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 KT381880 Citrobacter phage Margaery, complete genome 28009-28043 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 NC_007023 Enterobacteria phage RB43, complete genome 28296-28330 8 0.771
NZ_CP009043_4 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699666-699700 35 NC_048645 Cronobacter phage vB_CsaM_leB, complete genome 27631-27665 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349303 Cyanophage S-RIM14 isolate Sn_11_0110, complete genome 9845-9879 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349304 Cyanophage S-RIM14 isolate Sn_18_0910, complete genome 9869-9903 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349306 Cyanophage S-RIM14 isolate W1_23_0910, complete genome 9872-9906 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349298 Cyanophage S-RIM14 isolate LIS_02_1110, complete genome 9869-9903 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349299 Cyanophage S-RIM14 isolate LIS_22_0610, complete genome 9869-9903 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349305 Cyanophage S-RIM14 isolate Sn_23_0910, complete genome 9869-9903 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 JF974292 Cyanophage S-SSM2 genomic sequence 55998-56032 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349300 Cyanophage S-RIM14 isolate Np_11_1211, complete genome 9869-9903 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 NC_015281 Synechococcus phage S-ShM2, complete genome 9870-9904 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349301 Cyanophage S-RIM14 isolate Np_45_0711, complete genome 9869-9903 8 0.771
NZ_CP009043_4 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702610-702644 35 KX349302 Cyanophage S-RIM14 isolate RW_03_0110, complete genome 9869-9903 8 0.771
NZ_CP009043_4 4.92|702871|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702871-702905 35 NC_005354 Lactobacillus prophage Lj928, complete genome 5375-5409 8 0.771
NZ_CP009043_4 4.92|702871|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702871-702905 35 AY459533 Lactobacillus johnsonii prophage Lj928, complete genome 5375-5409 8 0.771
NZ_CP009043_4 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703002-703035 34 KR093640 Moraxella phage Mcat16, complete genome 9615-9648 8 0.765
NZ_CP009043_4 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703002-703035 34 KR093642 Moraxella phage Mcat18, complete genome 8530-8563 8 0.765
NZ_CP009043_4 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703002-703035 34 KR093641 Moraxella phage Mcat17, complete genome 1092-1125 8 0.765
NZ_CP009043_4 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703002-703035 34 KR093643 Moraxella phage Mcat19, complete genome 5141-5174 8 0.765
NZ_CP009043_4 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703002-703035 34 KR093639 Moraxella phage Mcat15, complete genome 9074-9107 8 0.765
NZ_CP009043_4 4.99|703327|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703327-703360 34 NC_011774 Bacillus cereus G9842 plasmid pG9842_140, complete sequence 138331-138364 8 0.765
NZ_CP009043_3 3.25|651227|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 651227-651263 37 NZ_CP024444 Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence 262078-262114 9 0.757
NZ_CP009043_3 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 652334-652367 34 MN693576 Marine virus AFVG_25M375, complete genome 8814-8847 9 0.735
NZ_CP009043_3 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 652334-652367 34 NZ_CP024657 Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence 74150-74183 9 0.735
NZ_CP009043_3 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 652334-652367 34 NZ_CP015251 Bacillus thuringiensis Bt18247 plasmid p174778, complete sequence 18672-18705 9 0.735
NZ_CP009043_3 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 652334-652367 34 NZ_CP015254 Bacillus thuringiensis Bt18247 plasmid p81952, complete sequence 27564-27597 9 0.735
NZ_CP009043_3 3.44|652463|33|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 652463-652495 33 MH319764 Marine virus AG-345-P14 Ga0172274_11 genomic sequence 72010-72042 9 0.727
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 JX194239 Staphylococcus phage SA11, complete genome 84968-85002 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 MT080584 UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome 126667-126701 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 MT080590 UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome 9200-9234 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 KY779848 Staphylococcus phage qdsa001, complete genome 71260-71294 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 KX532239 Staphylococcus phage StAP1, complete genome 51279-51313 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 LC492751 Staphylococcus phage KSAP7 genomic DNA, compelete genome 37930-37964 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 LC492752 Staphylococcus phage KSAP11 genomic DNA, compelete genome 37750-37784 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 MT080587 UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome 72835-72869 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 AP019522 Staphylococcal phage MR003 DNA, complete genome 73673-73707 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 NC_022090 Staphylococcus phage vB_SauM_Remus, complete genome 37633-37667 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 KP881332 Staphylococcus phage Stau2, complete genome 43527-43561 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 MT080588 UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome 49058-49092 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 MT080595 UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome 30310-30344 9 0.743
NZ_CP009043_3 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654036-654070 35 NC_020877 Staphylococcus phage vB_SauM_Romulus, complete genome 37633-37667 9 0.743
NZ_CP009043_3 3.76|654563|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654563-654597 35 HI504204 Sequence 46 from Patent EP2147092 21-55 9 0.743
NZ_CP009043_3 3.76|654563|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654563-654597 35 FW590634 JP 2010534058-A/44: ANTIBIOTIC RESISTANCE FREE LISTERIA STRAINS AND METHODS FOR CONSTRUCTING AND USING SAME 21-55 9 0.743
NZ_CP009043_3 3.76|654563|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654563-654597 35 NC_021539 Listeria phage LP-030-2, complete genome 19710-19744 9 0.743
NZ_CP009043_3 3.76|654563|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654563-654597 35 AJ312240 Bacteriophage PSA complete genome 19433-19467 9 0.743
NZ_CP009043_4 4.23|698357|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 698357-698390 34 MN183282 Arthrobacter phage Qui, complete genome 13872-13905 9 0.735
NZ_CP009043_4 4.23|698357|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 698357-698390 34 MT771347 Arthrobacter phage Paella, complete genome 13872-13905 9 0.735
NZ_CP009043_4 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699014-699047 34 MN693576 Marine virus AFVG_25M375, complete genome 8814-8847 9 0.735
NZ_CP009043_4 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699014-699047 34 NZ_CP024657 Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence 74150-74183 9 0.735
NZ_CP009043_4 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699014-699047 34 NZ_CP015251 Bacillus thuringiensis Bt18247 plasmid p174778, complete sequence 18672-18705 9 0.735
NZ_CP009043_4 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699014-699047 34 NZ_CP015254 Bacillus thuringiensis Bt18247 plasmid p81952, complete sequence 27564-27597 9 0.735
NZ_CP009043_4 4.99|703327|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703327-703360 34 NZ_LR214939 Mycoplasma salivarium strain NCTC10113 plasmid 2 118895-118928 9 0.735
NZ_CP009043_4 4.99|703327|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703327-703360 34 NC_022603 Carnobacterium inhibens subsp. gilichinskyi plasmid pWNCR64, complete sequence 19433-19466 9 0.735
NZ_CP009043_4 4.99|703327|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703327-703360 34 NZ_AP014828 Geminocystis sp. NIES-3709 plasmid pGM3709_07, complete sequence 3003-3036 9 0.735
NZ_CP009043_4 4.100|703391|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703391-703424 34 NZ_CP015808 Borrelia mayonii strain MN14-1539 plasmid lp36 31269-31302 9 0.735
NZ_CP009043_4 4.100|703391|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703391-703424 34 NZ_CP015793 Borrelia mayonii strain MN14-1420 plasmid lp36, complete sequence 31269-31302 9 0.735
NZ_CP009043_4 4.146|706396|33|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 706396-706428 33 MK554696 Fusobacterium phage Fnu1, complete genome 29211-29243 9 0.727
NZ_CP009043_3 3.3|649791|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 649791-649824 34 NZ_AP017296 Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence 215903-215936 10 0.706
NZ_CP009043_3 3.10|650243|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 650243-650276 34 MN694362 Marine virus AFVG_250M129, complete genome 22912-22945 10 0.706
NZ_CP009043_3 3.10|650243|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 650243-650276 34 MN694487 Marine virus AFVG_250M1119, complete genome 22184-22217 10 0.706
NZ_CP009043_3 3.71|654234|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654234-654267 34 NZ_CP022288 Bacillus subtilis strain SX01705 plasmid pSX01705-1, complete sequence 9637-9670 10 0.706
NZ_CP009043_3 3.71|654234|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 654234-654267 34 NZ_CP035229 Bacillus licheniformis strain SRCM103529 plasmid unnamed1, complete sequence 91707-91740 10 0.706
NZ_CP009043_4 4.26|698550|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 698550-698584 35 NZ_CP026318 Vibrio campbellii strain BoB-90 plasmid unnamed 2, complete sequence 48178-48212 10 0.714
NZ_CP009043_4 4.117|704501|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 704501-704534 34 NZ_CP021334 Marinobacter salarius strain HL2708#2 plasmid pHL2708Z5, complete sequence 101956-101989 10 0.706
NZ_CP009043_3 3.10|650243|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 650243-650276 34 MN694538 Marine virus AFVG_250M546, complete genome 17450-17483 11 0.676
NZ_CP009043_3 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 652334-652367 34 NC_012219 Clostridium botulinum plasmid pC2C203U28 DNA, complete sequence, serotype: type C, strain: (C)-203U28 76591-76624 11 0.676
NZ_CP009043_4 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 699014-699047 34 NC_012219 Clostridium botulinum plasmid pC2C203U28 DNA, complete sequence, serotype: type C, strain: (C)-203U28 76591-76624 11 0.676
NZ_CP009043_4 4.90|702739|38|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702739-702776 38 NC_018510 Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence 145966-146003 11 0.711
NZ_CP009043_4 4.90|702739|38|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702739-702776 38 NZ_CP013280 Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence 13548-13585 11 0.711
NZ_CP009043_4 4.90|702739|38|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702739-702776 38 NZ_CP039726 Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence 22599-22636 11 0.711
NZ_CP009043_4 4.90|702739|38|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 702739-702776 38 NZ_CP009350 Bacillus thuringiensis HD1002 plasmid 4, complete sequence 42378-42415 11 0.711
NZ_CP009043_4 4.104|703651|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 703651-703684 34 MN694540 Marine virus AFVG_250M802, complete genome 15074-15107 11 0.676
NZ_CP009043_4 4.149|706589|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 706589-706625 37 NZ_CP045351 Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence 975325-975361 11 0.703
NZ_CP009043_3 3.23|651093|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 651093-651129 37 NZ_AP014804 Escherichia coli O119:H6 strain EC404/03 plasmid pEC404/03-1, complete sequence 47645-47681 12 0.676
NZ_CP009043_3 3.41|652269|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 652269-652303 35 MN693151 Marine virus AFVG_25M560, complete genome 2488-2522 12 0.657
NZ_CP009043_4 4.124|704960|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT 704960-704996 37 NZ_AP014804 Escherichia coli O119:H6 strain EC404/03 plasmid pEC404/03-1, complete sequence 47646-47682 12 0.676

1. spacer 3.77|654628|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007000 (Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP1, complete sequence) position: , mismatch: 1, identity: 0.971

gacttaattacttatgcagcccaaatagaacaata	CRISPR spacer
gacttaattacttatgcagctcaaatagaacaata	Protospacer
********************.**************

2. spacer 5.1|1575685|28|NZ_CP009043|CRISPRCasFinder matches to NC_007110 (Rickettsia felis URRWXCal2 plasmid pRF, complete sequence) position: , mismatch: 5, identity: 0.821

tctgctagtacatctactgataatatta	CRISPR spacer
accgatagtacaactactgataatacta	Protospacer
 *.* ******* ************.**

3. spacer 5.1|1575685|28|NZ_CP009043|CRISPRCasFinder matches to NC_007111 (Rickettsia felis URRWXCal2 plasmid pRFdelta, complete sequence) position: , mismatch: 5, identity: 0.821

tctgctagtacatctactgataatatta	CRISPR spacer
accgatagtacaactactgataatacta	Protospacer
 *.* ******* ************.**

4. spacer 5.1|1575685|28|NZ_CP009043|CRISPRCasFinder matches to NC_019229 (Rickettsia felis plasmid pRF, complete sequence) position: , mismatch: 5, identity: 0.821

tctgctagtacatctactgataatatta	CRISPR spacer
accgatagtacaactactgataatacta	Protospacer
 *.* ******* ************.**

5. spacer 3.62|653646|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_029073 (Geobacillus virus E3, complete genome) position: , mismatch: 6, identity: 0.829

taaatattatcaagaacaattagacatt----gaatttg	CRISPR spacer
taaatattataaagagcaattagacatttcaagaa----	Protospacer
********** ****.************    ***    

6. spacer 4.23|698357|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_028763 (Polaribacter phage P12002S, complete genome) position: , mismatch: 6, identity: 0.824

catatat-aagctaaccaatcaagacaaaatttta	CRISPR spacer
-gtaaatcaagcgaaccaatcaacacaaaattttg	Protospacer
 .** ** **** ********** **********.

7. spacer 5.1|1575685|28|NZ_CP009043|CRISPRCasFinder matches to MN694782 (Marine virus AFVG_250M435, complete genome) position: , mismatch: 6, identity: 0.786

tctgctagtacatctactgataatatta	CRISPR spacer
catgctggcacatctactgataatagtt	Protospacer
. ****.*.**************** * 

8. spacer 3.25|651227|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to CP033524 (Acinetobacter pittii strain 2012N08-034 plasmid p2012N08-034-4, complete sequence) position: , mismatch: 7, identity: 0.811

cacagccttaaaagagcttgaagataataaatacata	CRISPR spacer
aaaagccttaaaagagcttcaagataataattttatt	Protospacer
 * **************** ********** * .** 

9. spacer 3.72|654298|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to AP017992 (Planktothrix agardhii NIES-204 plasmid plasmid1 DNA, complete sequence) position: , mismatch: 7, identity: 0.794

ctatgttatatttcgcgtcaagttctgcttttag	CRISPR spacer
atttggcatatttcgcgtcgagttctgctcttaa	Protospacer
 * ** .************.*********.***.

10. spacer 4.92|702871|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN693322 (Marine virus AFVG_25M496, complete genome) position: , mismatch: 7, identity: 0.8

-taatagttcgaaaaaattgaacaaaaatggagtaa	CRISPR spacer
ataacagggtaaaaaaa-tgaaaaaaaatggagtaa	Protospacer
 ***.**  ..****** **** *************

11. spacer 4.147|706459|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021876 (Enterococcus wangshanyuanii strain MN05 plasmid unnamed3) position: , mismatch: 7, identity: 0.794

tatattcat-cttgacatcacttaatttttttact	CRISPR spacer
-attttgacaattgacaacacttcatttttttact	Protospacer
 ** ** *.  ****** ***** ***********

12. spacer 6.1|1575901|34|NZ_CP009043|CRISPRCasFinder matches to MN694682 (Marine virus AFVG_250M291, complete genome) position: , mismatch: 7, identity: 0.794

ggtaacggtagatttagagcagatagtaacacta	CRISPR spacer
attagaggtagatttaaagcagatagtaaaacaa	Protospacer
. **. **********.************ ** *

13. spacer 6.1|1575901|34|NZ_CP009043|CRISPRCasFinder matches to MN694060 (Marine virus AFVG_250M294, complete genome) position: , mismatch: 7, identity: 0.794

ggtaacggtagatttagagcagatagtaacacta	CRISPR spacer
attagaggtagatttaaagcagatagtaaaacaa	Protospacer
. **. **********.************ ** *

14. spacer 3.41|652269|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050172 (Serratia fonticola strain CPSE11 plasmid plas1, complete sequence) position: , mismatch: 8, identity: 0.771

ttatgcgtt-ttttggcttttttgccattgtttttg	CRISPR spacer
-tagccatcattttggcttttttgtcatttttttta	Protospacer
 **  *.*. **************.**** *****.

15. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to HE858210 (Enterobacteria phage RB43, isolate RB43-GVA complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

16. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN508623 (UNVERIFIED: Enterobacter phage EC-F1, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

17. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN508624 (UNVERIFIED: Enterobacter phage EC-F2, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

18. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MH823906 (Citrobacter phage Maroon, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

19. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KM236237 (Citrobacter phage Miller, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

20. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to LC589952 (Enterobacter phage vB_EkoM5VN DNA, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

21. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX431560 (Cronobacter phage vB_CsaM_leN, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

22. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MT334653 (Buttiauxella phage vB_ButM_GuL6, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

23. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to HE981739 (Enterobacteria phage RB43, isolate RB43-GVA orf057::gfp complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

24. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_048646 (Cronobacter phage vB_CsaM_leE, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

25. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN508621 (UNVERIFIED: Enterobacter phage EC-W1, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

26. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MT341500 (Enterobacter phage EBPL, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

27. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to JN882287 (Cronobacter phage vB_CsaM_GAP161, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

28. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_031057 (Citrobacter phage vB_CfrM_CfP1, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

29. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN508622 (UNVERIFIED: Enterobacter phage EC-W2, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

30. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_029013 (Citrobacter phage IME-CF2, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

31. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KT381880 (Citrobacter phage Margaery, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

32. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_007023 (Enterobacteria phage RB43, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

33. spacer 4.43|699666|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_048645 (Cronobacter phage vB_CsaM_leB, complete genome) position: , mismatch: 8, identity: 0.771

cgaaggtaagattatggagcttagtg---ccgtatggc	CRISPR spacer
tgaaggtaatattatggaacttagtgaaaacgtac---	Protospacer
.******** ********.*******    ****.   

34. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349303 (Cyanophage S-RIM14 isolate Sn_11_0110, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

35. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349304 (Cyanophage S-RIM14 isolate Sn_18_0910, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

36. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349306 (Cyanophage S-RIM14 isolate W1_23_0910, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

37. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349298 (Cyanophage S-RIM14 isolate LIS_02_1110, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

38. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349299 (Cyanophage S-RIM14 isolate LIS_22_0610, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

39. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349305 (Cyanophage S-RIM14 isolate Sn_23_0910, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

40. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to JF974292 (Cyanophage S-SSM2 genomic sequence) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

41. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349300 (Cyanophage S-RIM14 isolate Np_11_1211, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

42. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_015281 (Synechococcus phage S-ShM2, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

43. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349301 (Cyanophage S-RIM14 isolate Np_45_0711, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

44. spacer 4.88|702610|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX349302 (Cyanophage S-RIM14 isolate RW_03_0110, complete genome) position: , mismatch: 8, identity: 0.771

caaatctgtagaaacttatcttttgagcttttaca----	CRISPR spacer
caaatttgtagaaatttatcttttg----cttacgcttt	Protospacer
*****.********.**********    .****.    

45. spacer 4.92|702871|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_005354 (Lactobacillus prophage Lj928, complete genome) position: , mismatch: 8, identity: 0.771

taatagttcgaaaaaattgaacaaaaatggagtaa	CRISPR spacer
ttttagttcaaaaaaattgaagaaaaatgttgaca	Protospacer
*  ******.*********** *******  *  *

46. spacer 4.92|702871|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to AY459533 (Lactobacillus johnsonii prophage Lj928, complete genome) position: , mismatch: 8, identity: 0.771

taatagttcgaaaaaattgaacaaaaatggagtaa	CRISPR spacer
ttttagttcaaaaaaattgaagaaaaatgttgaca	Protospacer
*  ******.*********** *******  *  *

47. spacer 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KR093640 (Moraxella phage Mcat16, complete genome) position: , mismatch: 8, identity: 0.765

gctcaatttgatgagcttgtcaaatctcaaaagg	CRISPR spacer
tatggctttgatgagcttgtccaagctcaaaaag	Protospacer
  * . *************** ** *******.*

48. spacer 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KR093642 (Moraxella phage Mcat18, complete genome) position: , mismatch: 8, identity: 0.765

gctcaatttgatgagcttgtcaaatctcaaaagg	CRISPR spacer
tatggctttgatgagcttgtccaagctcaaaaag	Protospacer
  * . *************** ** *******.*

49. spacer 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KR093641 (Moraxella phage Mcat17, complete genome) position: , mismatch: 8, identity: 0.765

gctcaatttgatgagcttgtcaaatctcaaaagg	CRISPR spacer
tatggctttgatgagcttgtccaagctcaaaaag	Protospacer
  * . *************** ** *******.*

50. spacer 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KR093643 (Moraxella phage Mcat19, complete genome) position: , mismatch: 8, identity: 0.765

gctcaatttgatgagcttgtcaaatctcaaaagg	CRISPR spacer
tatggctttgatgagcttgtccaagctcaaaaag	Protospacer
  * . *************** ** *******.*

51. spacer 4.94|703002|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KR093639 (Moraxella phage Mcat15, complete genome) position: , mismatch: 8, identity: 0.765

gctcaatttgatgagcttgtcaaatctcaaaagg	CRISPR spacer
tatggctttgatgagcttgtccaagctcaaaaag	Protospacer
  * . *************** ** *******.*

52. spacer 4.99|703327|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_011774 (Bacillus cereus G9842 plasmid pG9842_140, complete sequence) position: , mismatch: 8, identity: 0.765

aacatttttcaaaaacatcaaataag-cctttgcg	CRISPR spacer
ttgtattttcaaaaacatcaaataagaattttgc-	Protospacer
     *********************  .***** 

53. spacer 3.25|651227|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024444 (Moraxella osloensis strain NP7 plasmid pNP7-1, complete sequence) position: , mismatch: 9, identity: 0.757

cacagccttaaaagagcttgaagataataaatacata-	CRISPR spacer
ggcagccttaaaacagcctgaagataat-ggtagttat	Protospacer
 .*********** ***.********** ..**  ** 

54. spacer 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN693576 (Marine virus AFVG_25M375, complete genome) position: , mismatch: 9, identity: 0.735

gcttttcaagtttatatctgtctatatccttagc	CRISPR spacer
ttctttcaagtttatatctgtctttctcaatccc	Protospacer
 ..******************** * **  *  *

55. spacer 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024657 (Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence) position: , mismatch: 9, identity: 0.735

gcttttcaagtttatatctgtctat----atccttagc	CRISPR spacer
tcttttaaagtttctatctgtctatttaaatttt----	Protospacer
 ***** ****** ***********    **..*    

56. spacer 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015251 (Bacillus thuringiensis Bt18247 plasmid p174778, complete sequence) position: , mismatch: 9, identity: 0.735

gcttttcaagtttatatctgtctat----atccttagc	CRISPR spacer
tcttttaaagtttctatctgtctatttaaatttt----	Protospacer
 ***** ****** ***********    **..*    

57. spacer 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015254 (Bacillus thuringiensis Bt18247 plasmid p81952, complete sequence) position: , mismatch: 9, identity: 0.735

gcttttcaagtttatatctgtctat----atccttagc	CRISPR spacer
tcttttaaagtttctatctgtctatttaaatttt----	Protospacer
 ***** ****** ***********    **..*    

58. spacer 3.44|652463|33|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MH319764 (Marine virus AG-345-P14 Ga0172274_11 genomic sequence) position: , mismatch: 9, identity: 0.727

ggctctgaagctgatattcaatcacttattgga	CRISPR spacer
aacctttgtgctgatattcagtcatttattgga	Protospacer
..*..* . ***********.***.********

59. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to JX194239 (Staphylococcus phage SA11, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

60. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MT080584 (UNVERIFIED: Staphylococcus phage vB_SauM_EW15, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

61. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MT080590 (UNVERIFIED: Staphylococcus phage vB_SauM_EW27, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

62. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KY779848 (Staphylococcus phage qdsa001, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

63. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KX532239 (Staphylococcus phage StAP1, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

64. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to LC492751 (Staphylococcus phage KSAP7 genomic DNA, compelete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

65. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to LC492752 (Staphylococcus phage KSAP11 genomic DNA, compelete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

66. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MT080587 (UNVERIFIED: Staphylococcus phage vB_SauM_EW20, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

67. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to AP019522 (Staphylococcal phage MR003 DNA, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

68. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_022090 (Staphylococcus phage vB_SauM_Remus, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

69. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to KP881332 (Staphylococcus phage Stau2, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

70. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MT080588 (UNVERIFIED: Staphylococcus phage vB_SauM_EW22, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

71. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MT080595 (UNVERIFIED: Staphylococcus phage vB_SauM_EW41, partial genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

72. spacer 3.68|654036|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_020877 (Staphylococcus phage vB_SauM_Romulus, complete genome) position: , mismatch: 9, identity: 0.743

ttgagca---atagtttatttgctttaaatataccaag	CRISPR spacer
---aacattcataatttatttggtttaaatatacctga	Protospacer
   *.**   ***.******** ************ ..

73. spacer 3.76|654563|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to HI504204 (Sequence 46 from Patent EP2147092) position: , mismatch: 9, identity: 0.743

cacagatgaaaataccacaactgtt------aatgatttag	CRISPR spacer
aacagatgaaaataccacaaattttaccacaaatg------	Protospacer
 ******************* * **      ****      

74. spacer 3.76|654563|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to FW590634 (JP 2010534058-A/44: ANTIBIOTIC RESISTANCE FREE LISTERIA STRAINS AND METHODS FOR CONSTRUCTING AND USING SAME) position: , mismatch: 9, identity: 0.743

cacagatgaaaataccacaactgtt------aatgatttag	CRISPR spacer
aacagatgaaaataccacaaattttaccacaaatg------	Protospacer
 ******************* * **      ****      

75. spacer 3.76|654563|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 9, identity: 0.743

cacagatgaaaataccacaactgtt------aatgatttag	CRISPR spacer
aacagatgaaaataccacaaattttaccacaaatg------	Protospacer
 ******************* * **      ****      

76. spacer 3.76|654563|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to AJ312240 (Bacteriophage PSA complete genome) position: , mismatch: 9, identity: 0.743

cacagatgaaaataccacaactgtt------aatgatttag	CRISPR spacer
aacagatgaaaataccacaaattttaccacaaatg------	Protospacer
 ******************* * **      ****      

77. spacer 4.23|698357|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN183282 (Arthrobacter phage Qui, complete genome) position: , mismatch: 9, identity: 0.735

catatataagctaaccaatcaagacaaaatttta	CRISPR spacer
cgaaggtaagctaaccaataaagagaaaatgctt	Protospacer
*. * .************* **** ***** .* 

78. spacer 4.23|698357|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MT771347 (Arthrobacter phage Paella, complete genome) position: , mismatch: 9, identity: 0.735

catatataagctaaccaatcaagacaaaatttta	CRISPR spacer
cgaaggtaagctaaccaataaagagaaaatgctt	Protospacer
*. * .************* **** ***** .* 

79. spacer 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN693576 (Marine virus AFVG_25M375, complete genome) position: , mismatch: 9, identity: 0.735

gcttttcaagtttatatctgtctatatccttagc	CRISPR spacer
ttctttcaagtttatatctgtctttctcaatccc	Protospacer
 ..******************** * **  *  *

80. spacer 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024657 (Bacillus cereus strain MLY1 plasmid pMLY1.1, complete sequence) position: , mismatch: 9, identity: 0.735

gcttttcaagtttatatctgtctat----atccttagc	CRISPR spacer
tcttttaaagtttctatctgtctatttaaatttt----	Protospacer
 ***** ****** ***********    **..*    

81. spacer 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015251 (Bacillus thuringiensis Bt18247 plasmid p174778, complete sequence) position: , mismatch: 9, identity: 0.735

gcttttcaagtttatatctgtctat----atccttagc	CRISPR spacer
tcttttaaagtttctatctgtctatttaaatttt----	Protospacer
 ***** ****** ***********    **..*    

82. spacer 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015254 (Bacillus thuringiensis Bt18247 plasmid p81952, complete sequence) position: , mismatch: 9, identity: 0.735

gcttttcaagtttatatctgtctat----atccttagc	CRISPR spacer
tcttttaaagtttctatctgtctatttaaatttt----	Protospacer
 ***** ****** ***********    **..*    

83. spacer 4.99|703327|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214939 (Mycoplasma salivarium strain NCTC10113 plasmid 2) position: , mismatch: 9, identity: 0.735

aacatttttcaaaaacatcaaataag---cctttgcg	CRISPR spacer
gtcattttttaaaatcatcaaataagaaatattt---	Protospacer
. *******.**** ***********   . ***   

84. spacer 4.99|703327|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_022603 (Carnobacterium inhibens subsp. gilichinskyi plasmid pWNCR64, complete sequence) position: , mismatch: 9, identity: 0.735

aacattt----ttcaaaaacatcaaataagcctttgcg	CRISPR spacer
----ttttcacttcaaaaaaatgaaataagcctttttc	Protospacer
    ***    ******** ** ************ . 

85. spacer 4.99|703327|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014828 (Geminocystis sp. NIES-3709 plasmid pGM3709_07, complete sequence) position: , mismatch: 9, identity: 0.735

aacatttttcaaaaacatcaaataagcctttgcg	CRISPR spacer
atcattttccaaaaacatcaaaaaagaattaaga	Protospacer
* ******.************* ***  ** . .

86. spacer 4.100|703391|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015808 (Borrelia mayonii strain MN14-1539 plasmid lp36) position: , mismatch: 9, identity: 0.735

cgaattctaaagaaacaaatccaaatgaaatagg	CRISPR spacer
ttggctttaaagaaacatattcaaatgaaatatg	Protospacer
. ...*.********** **.*********** *

87. spacer 4.100|703391|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015793 (Borrelia mayonii strain MN14-1420 plasmid lp36, complete sequence) position: , mismatch: 9, identity: 0.735

cgaattctaaagaaacaaatccaaatgaaatagg	CRISPR spacer
ttggctttaaagaaacatattcaaatgaaatatg	Protospacer
. ...*.********** **.*********** *

88. spacer 4.146|706396|33|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MK554696 (Fusobacterium phage Fnu1, complete genome) position: , mismatch: 9, identity: 0.727

tcgtatatcattattttatccttgaaagttctg	CRISPR spacer
tatcatatcattattttgtcctttaaagaaata	Protospacer
*  .*************.***** ****   *.

89. spacer 3.3|649791|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP017296 (Nostoc sp. NIES-3756 plasmid pNOS3756_1, complete sequence) position: , mismatch: 10, identity: 0.706

catactcttttggaacttctattttttggtcggc	CRISPR spacer
catactcttcaggaacttctatttctaaatactt	Protospacer
*********. *************.* ..*   .

90. spacer 3.10|650243|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN694362 (Marine virus AFVG_250M129, complete genome) position: , mismatch: 10, identity: 0.706

gatttgtatctgttgtagtatctataatgcgatt	CRISPR spacer
aatctgtatctgttgtagtctctatcttcacacc	Protospacer
.**.*************** *****  *   *..

91. spacer 3.10|650243|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN694487 (Marine virus AFVG_250M1119, complete genome) position: , mismatch: 10, identity: 0.706

gatttgtatctgttgtagtatctataatgcgatt	CRISPR spacer
aatctgtatctgttgtagtctctatcttcacacc	Protospacer
.**.*************** *****  *   *..

92. spacer 3.71|654234|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022288 (Bacillus subtilis strain SX01705 plasmid pSX01705-1, complete sequence) position: , mismatch: 10, identity: 0.706

tcagttttcttggacttactccaacaatatatga	CRISPR spacer
tccgttttctttgacttactccaatctgctactt	Protospacer
** ******** ************.    **.  

93. spacer 3.71|654234|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035229 (Bacillus licheniformis strain SRCM103529 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.706

tcagttttcttggacttactccaacaatatatga	CRISPR spacer
tccgttttctttgacttactccaatctgctactt	Protospacer
** ******** ************.    **.  

94. spacer 4.26|698550|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026318 (Vibrio campbellii strain BoB-90 plasmid unnamed 2, complete sequence) position: , mismatch: 10, identity: 0.714

taatttggggataaatgcttatgctagtaattcgg	CRISPR spacer
taatttggggataaccgcttatgctcgcttataaa	Protospacer
************** .********* *.   * ..

95. spacer 4.117|704501|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021334 (Marinobacter salarius strain HL2708#2 plasmid pHL2708Z5, complete sequence) position: , mismatch: 10, identity: 0.706

gtgaaattgataaagagagtaagaccatagagct	CRISPR spacer
agcacaaccataaagagagtaagaccctacagcc	Protospacer
.  * * . ***************** ** ***.

96. spacer 3.10|650243|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN694538 (Marine virus AFVG_250M546, complete genome) position: , mismatch: 11, identity: 0.676

gatttgtatctgttgtagtatctataatgcgatt	CRISPR spacer
aatctgtatctgttgtagtctctatcttcacgcc	Protospacer
.**.*************** *****  *   ...

97. spacer 3.42|652334|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_012219 (Clostridium botulinum plasmid pC2C203U28 DNA, complete sequence, serotype: type C, strain: (C)-203U28) position: , mismatch: 11, identity: 0.676

gcttttcaagtttatatctgtctatatccttagc	CRISPR spacer
aattttcaagtttatatttatctataactaattt	Protospacer
. ***************.*.****** *.    .

98. spacer 4.33|699014|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_012219 (Clostridium botulinum plasmid pC2C203U28 DNA, complete sequence, serotype: type C, strain: (C)-203U28) position: , mismatch: 11, identity: 0.676

gcttttcaagtttatatctgtctatatccttagc	CRISPR spacer
aattttcaagtttatatttatctataactaattt	Protospacer
. ***************.*.****** *.    .

99. spacer 4.90|702739|38|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NC_018510 (Bacillus thuringiensis HD-789 plasmid pBTHD789-3, complete sequence) position: , mismatch: 11, identity: 0.711

aaggtaatatttttgatagtttttgatagtagcttaga	CRISPR spacer
caaataatatttttaatagtttttgattgtatagctaa	Protospacer
 *..**********.************ ***   . .*

100. spacer 4.90|702739|38|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013280 (Bacillus thuringiensis serovar israelensis strain AM65-52 plasmid pAM65-52-5-100K, complete sequence) position: , mismatch: 11, identity: 0.711

aaggtaatatttttgatagtttttgatagtagcttaga	CRISPR spacer
caaataatatttttaatagtttttgattgtatagctaa	Protospacer
 *..**********.************ ***   . .*

101. spacer 4.90|702739|38|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039726 (Bacillus thuringiensis strain BT-59 plasmid p5, complete sequence) position: , mismatch: 11, identity: 0.711

aaggtaatatttttgatagtttttgatagtagcttaga	CRISPR spacer
caaataatatttttaatagtttttgattgtatagctaa	Protospacer
 *..**********.************ ***   . .*

102. spacer 4.90|702739|38|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009350 (Bacillus thuringiensis HD1002 plasmid 4, complete sequence) position: , mismatch: 11, identity: 0.711

aaggtaatatttttgatagtttttgatagtagcttaga	CRISPR spacer
caaataatatttttaatagtttttgattgtatagctaa	Protospacer
 *..**********.************ ***   . .*

103. spacer 4.104|703651|34|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN694540 (Marine virus AFVG_250M802, complete genome) position: , mismatch: 11, identity: 0.676

tcataatataataataggaccatgtaaatggcta	CRISPR spacer
ctcagaaattatagtaggaccatgtaaatggtgt	Protospacer
..  .* ** ***.*****************.  

104. spacer 4.149|706589|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 11, identity: 0.703

cttttgcttgttcgtaatcatcatttt--------tgatgaaatt	CRISPR spacer
gttatgcttgttcgtattcatcattttgtcctctctg--------	Protospacer
 ** ************ **********        **        

105. spacer 3.23|651093|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014804 (Escherichia coli O119:H6 strain EC404/03 plasmid pEC404/03-1, complete sequence) position: , mismatch: 12, identity: 0.676

ttcaaggctttataaaagatatattcaagccaaaaag	CRISPR spacer
atgccaatcttataaaatatatattcaagcaaaaatc	Protospacer
 *   ....******** ************ ****  

106. spacer 3.41|652269|35|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to MN693151 (Marine virus AFVG_25M560, complete genome) position: , mismatch: 12, identity: 0.657

ttatgcgttttttggcttttttgccattgtttttg	CRISPR spacer
agtcattttttttggtttttttgccattctttgcc	Protospacer
   ... ********.************ *** . 

107. spacer 4.124|704960|37|NZ_CP009043|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014804 (Escherichia coli O119:H6 strain EC404/03 plasmid pEC404/03-1, complete sequence) position: , mismatch: 12, identity: 0.676

actttttggcttgaatatatcttttataaagccttga	CRISPR spacer
ggatttttgcttgaatatatattttataagattggca	Protospacer
.  **** ************ ********....   *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage