CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008787	Campylobacter jejuni subsp. jejuni strain MTVDSCj20 chromosome, complete genome	2 crisprs	DEDDh,WYL,cas2,cas1,cas9,csa3	0	7	2	0

1. NZ_CP008787

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008787_1

• CRISPR_ID: NZ_CP008787_1
• CRISPR_location: 1364829-1364908
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP008787_1

Consensus_repeat	Method
TCTTTTTGTTCTTTTAAAGCTTC	CRISPRCasFinder

spacers of NZ_CP008787_1

>1.1|1364852|34|NZ_CP008787|CRISPRCasFinder
TTTTTTAGCTTTATACTCAGCCTTACTCATATAA

CRISPR arrays and Neighbor proteins around NZ_CP008787_1

CRISPR arrays

The CRISPR arrays of NZ_CP008787_1

>merge|NZ_CP008787|1|1364829-1364908|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTCTTTTTTAGCTTTATACTCAGCCTTACTCATATAATCTTTTTGTTCTTTTAAAGCATC

>NZ_CP008787|1|1|1364829-1364908|CRISPRCasFinder
TCTTTTTGTTCTTTTAAAGCTTC	TTTTTTAGCTTTATACTCAGCCTTACTCATATAA
TCTTTTTGTTCTTTTAAAGCATC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008787.1|WP_002877378.1|1362797_1363796_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223135
NZ_CP008787.1|WP_002825806.1|1367238_1367586_+|holo-ACP-synthase	unknown	unknown	gnl|CDD|223807
NZ_CP008787.1|WP_002877376.1|1360096_1360921_-|enoyl-ACP-reductase-FabI	unknown	unknown	gnl|CDD|181416
NZ_CP008787.1|WP_038402168.1|1356761_1358603_+|ferrous-iron-transport-protein-B	unknown	unknown	gnl|CDD|223447
NZ_CP008787.1|WP_002779147.1|1356540_1356765_+|ferrous-iron-transport-protein-A	unknown	unknown	gnl|CDD|224830
NZ_CP008787.1|WP_153610262.1|1374242_1374383_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP008787.1|WP_014517092.1|1365210_1366581_-|phosphoglucosamine-mutase-PgmL	unknown	unknown	gnl|CDD|100091
NZ_CP008787.1|WP_002855429.1|1366702_1367239_+|flagellar-basal-body-associated-protein-FliL	unknown	unknown	gnl|CDD|181433
NZ_CP008787.1|WP_014517094.1|1369360_1370482_-|membrane-protein	unknown	unknown	unknown
NZ_CP008787.1|WP_014517090.1|1360924_1361596_-|triose-phosphate-isomerase	unknown	unknown	gnl|CDD|234589
NZ_CP008787.1|WP_002783833.1|1361592_1362795_-|phosphoglycerate-kinase	unknown	unknown	gnl|CDD|234613
NZ_CP008787.1|WP_014517093.1|1368002_1369364_-|cytochrome-P450	unknown	unknown	gnl|CDD|225035
NZ_CP008787.1|WP_038402171.1|1375076_1376369_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224153
NZ_CP008787.1|WP_002880391.1|1367586_1368006_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP008787.1|WP_002877370.1|1355118_1356459_+|MmgE/PrpD-family-protein	unknown	unknown	gnl|CDD|377179
NZ_CP008787.1|WP_002855339.1|1364428_1364755_+|ribosome-silencing-factor	unknown	unknown	gnl|CDD|223870
NZ_CP008787.1|WP_014517098.1|1373053_1373545_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP008787.1|WP_014517091.1|1363855_1364401_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	unknown	unknown	gnl|CDD|223985
NZ_CP008787.1|WP_014517095.1|1370554_1371739_-|capsule-polysaccharide-modification-protein-KpsS	unknown	unknown	gnl|CDD|226092
NZ_CP008787.1|WP_014517089.1|1358599_1360093_-|hydrogenase-small-subunit	unknown	unknown	gnl|CDD|224654

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP008787.1|WP_002877378.1|1362797_1363796_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase	gnl|CDD|223135	COG0057, GapA, Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase [Carbohydrate transport and metabolism].	3.35917e-168
NZ_CP008787.1|WP_002825806.1|1367238_1367586_+|holo-ACP-synthase	gnl|CDD|223807	COG0736, AcpS, Phosphopantetheinyl transferase (holo-ACP synthase) [Lipid metabolism].	3.71491e-40
NZ_CP008787.1|WP_002877376.1|1360096_1360921_-|enoyl-ACP-reductase-FabI	gnl|CDD|181416	PRK08415, PRK08415, enoyl-[acyl-carrier-protein] reductase FabI.	0
NZ_CP008787.1|WP_038402168.1|1356761_1358603_+|ferrous-iron-transport-protein-B	gnl|CDD|223447	COG0370, FeoB, Fe2+ transport system protein B [Inorganic ion transport and metabolism].	0
NZ_CP008787.1|WP_002779147.1|1356540_1356765_+|ferrous-iron-transport-protein-A	gnl|CDD|224830	COG1918, FeoA, Fe2+ transport system protein A [Inorganic ion transport and metabolism].	1.69416e-22
NZ_CP008787.1|WP_014517092.1|1365210_1366581_-|phosphoglucosamine-mutase-PgmL	gnl|CDD|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP008787.1|WP_002855429.1|1366702_1367239_+|flagellar-basal-body-associated-protein-FliL	gnl|CDD|181433	PRK08455, fliL, flagellar basal body-associated protein FliL; Reviewed.	2.19231e-91
NZ_CP008787.1|WP_014517090.1|1360924_1361596_-|triose-phosphate-isomerase	gnl|CDD|234589	PRK00042, tpiA, triosephosphate isomerase; Provisional.	9.337e-86
NZ_CP008787.1|WP_002783833.1|1361592_1362795_-|phosphoglycerate-kinase	gnl|CDD|234613	PRK00073, pgk, phosphoglycerate kinase; Provisional.	0
NZ_CP008787.1|WP_014517093.1|1368002_1369364_-|cytochrome-P450	gnl|CDD|225035	COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis, transport, and catabolism].	1.78086e-78
NZ_CP008787.1|WP_038402171.1|1375076_1376369_+|FAD-dependent-oxidoreductase	gnl|CDD|224153	COG1232, HemY, Protoporphyrinogen oxidase [Coenzyme metabolism].	8.67666e-59
NZ_CP008787.1|WP_002877370.1|1355118_1356459_+|MmgE/PrpD-family-protein	gnl|CDD|377179	pfam03972, MmgE_PrpD, MmgE/PrpD family. This family includes 2-methylcitrate dehydratase EC:4.2.1.79 (PrpD) that is required for propionate catabolism. It catalyzes the third step of the 2-methylcitric acid cycle.	2.97497e-117
NZ_CP008787.1|WP_002855339.1|1364428_1364755_+|ribosome-silencing-factor	gnl|CDD|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	8.97235e-38
NZ_CP008787.1|WP_014517091.1|1363855_1364401_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase	gnl|CDD|223985	COG1057, NadD, Nicotinic acid mononucleotide adenylyltransferase [Coenzyme metabolism].	5.6485e-57
NZ_CP008787.1|WP_014517095.1|1370554_1371739_-|capsule-polysaccharide-modification-protein-KpsS	gnl|CDD|226092	COG3562, KpsS, Capsule polysaccharide export protein [Cell envelope biogenesis, outer membrane].	0
NZ_CP008787.1|WP_014517089.1|1358599_1360093_-|hydrogenase-small-subunit	gnl|CDD|224654	COG1740, HyaA, Ni,Fe-hydrogenase I small subunit [Energy production and conversion].	7.23056e-155

Protein sequences

>NZ_CP008787.1|WP_002855339.1|1364428_1364755_+|ribosome-silencing-factor
MQERIDLIVKILDEKKAEDIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTQLKAKGEEFLNIDSSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKGRV
>NZ_CP008787.1|WP_014517091.1|1363855_1364401_+|nicotinate-(nicotinamide)-nucleotide-adenylyltransferase
MKIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFKQNFSADEKQRFLWVKKLWGHFPKVEICDFETKQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLNSLVEFVIANRNDIEIPKNFKDLKTDKKIASSFIRNTLNINEVCEEIKDEVKKYYEKLQKN
>NZ_CP008787.1|WP_002877378.1|1362797_1363796_-|type-I-glyceraldehyde-3-phosphate-dehydrogenase
MAVKVAINGFGRIGRCVARIILERNDIELVAINDTTDIELTKYLFKYDTVHGEFKGSVDSEGDDLVVNGKKIKVFKSRNVKDLDFAKHGAQIVLECTGAHLTMAKCQEFIDMGVQKVIMSAPAKDDTPTYVLGVNSELYKGESIISNASCTTNCLGPVCRVLQDNFGIEKGLMTTIHAYTNGQSIIDAKAKDKRRSRAAAQNIIPTSTGAAKAMKLVMPELNGKLHGQSMRVPVIDVSSVDLTAQLSRKVSKDEINEAFRKAATTNLKGILMVDDEERVSSDFITCSYGAIVASDLTQVIADDFIKVIAWYDNEWGYSSRLVDMAVYIANKA
>NZ_CP008787.1|WP_002783833.1|1361592_1362795_-|phosphoglycerate-kinase
MSDIISIKDIDLAKKKVFIRCDFNVPQDDFLNITDDRRIRSAIPTIRYCLDNGCSVILASHLGRPKEISSKYSLEPVAKRLARLLDKEIIMAKDVIGEDAKTKAMNLKAGEILLLENLRFEKGETKNDENLAKELASMVQVYINDAFGVCHRAHSSVEAITKFFDEKHKGAGFLLQKEIDFASNLIKHPARPFVAVVGGSKVSGKLQALTNLLPKVDKLIIGGGMAFTFLKALGYDIGNSLLEEELLEEANKILTKGKNLGVKIYLPVDVVAAPACSQDAPMKFVPAQEIPNGWMGLDIGPASVRLFKEVISDAQTIWWNGPMGVFEIDKFSKGSIKMSHYISEGHATSVVGGGDTADVVARAGDADEMTFISTGGGASLELIEGKELPGVKALRSKENE
>NZ_CP008787.1|WP_014517090.1|1360924_1361596_-|triose-phosphate-isomerase
MIFAANLKCNHTRASFKIYAEILNKTMGAKCDDIIVFPPSVAFLENENNFIQGAQNFYPCVNGAFTGELGKEHLDEFGIKCVLIGHSERRALGDEEFIKAKFDFAKEHGYKIVFCIGENLDTKNSGKTLEFLKKQLEVIDLNYEKLIIAYEPIYSIGTGVSAQATDIAKVLEFLASLTKAPLLYGGSVNENNIKEILSVNHCGGVLIGSAALKVENFIKLIKG
>NZ_CP008787.1|WP_002877376.1|1360096_1360921_-|enoyl-ACP-reductase-FabI
MIMKGKKGLIVGVANNKSIAYGIAKACFDQGAELAFTFLNDALKKRVEPIAQEFNSNFVYELDVNNNEHLDSIAEKIKKDLGEIDFVVHAVAFAPKEALENSFLETSKEAFDIAMQTSVYSLLSLTRAVLPILKDKGSILTLSYLGGVKYVPHYNVMGVAKAALESSVRYLARDLGVKGIRVNAISAGPIKTLAASGIGDFRMILKYNEINSPLKRNVSIEDVGNSAMYLLSDLANGVTGEVHYVDAGYNIMGMGDVEKNEEGQTVLCWDNQKG
>NZ_CP008787.1|WP_014517089.1|1358599_1360093_-|hydrogenase-small-subunit
MTKLSNEELKNILEGRIKKLENSILKEDKVVNEESVKILAKHLSLGNEIPALAQRFFQIAPKTKLVWLHLCECTGCSESLLRSELPSFDELIFDFFSLEYHETLMAANGTKAEELLEHVLEEDFILAVEGGVAAIDTFFLTIGAQGESGYEILEKLAAKAKAIFAVGTCSSYGGIQAAYPNPSKTCGISEVLSQKVVNIPGCPPSDINIIATLSFFALFGVLPELDEQNRPVWAYGKCLHDMCERKAKFESGIFAEHFDDEAAKNGACLFKVGCKGPYTYNNCPKVKFNAKTSWPVAAGHGCIACSEKNFWDEFGNYEKPMANIFSYAKLCNEELKQEFFLEEQIKILEQIDFEFESNIKLILQNIAKNKLGALLVENYKKSFEKNYAFIEQNFDENPMPSKDFWKYLEISFILVKGAFLKDKNDFLIAAKNYAFKHASPYDFKLNMNAEKPKLDVSKSFRMTLIYLCGGLDFEGVAYSILKAFEDNIAKISSLKAS
>NZ_CP008787.1|WP_038402168.1|1356761_1358603_+|ferrous-iron-transport-protein-B
MKKIKIALVGQPNVGKSLLINALCKANMKVGNFSGVTIEKASAKTFYKNYEFEVIDLPGTYSLDGYSEEEKITRHFLNQNDYDVIVNVLDATNLERNLILSAELLSLNKKMLLALNMCDEAKKEGIELDTSVLSQEFQSQVVEISAKTKENLELLLQKIIILFESKFIPRSQFYTPLCEKSPEKEDLLYFINELSKKIITHKKEERNLTKKIDALLIHKFFGLPIFLFLMWLLFQLTFSLGQIPMDYIESGFNTLGEFVKNNISNTFIASALADGIIAGVGAVILFLPNIMILFLGIALLETTGYMSRVAFLLDGILHKFGLHGKSFIPLITGFGCSVPAFMATRTLKNKRDRLLTLFVINFMSCGARLPVYVLFIGAFFPSEKAGNYLFGIYILGAILGLCAAKFLRMTAFRGLDEPFVMEMPKYRMPNWHLVWFMVYNKAKMYLKKAGTFILLASLLIWFASNFPKSEENLNDFNAQERAIEQSYLGQFGKGIEPIFKPLELDWKLSVSLISGLAAKEVMILTMGVLYSLGKDVDETNNDLKGIIAKNIPIPSAVAFILFVMIYNPCFAATIVFSKESGKLKYTLFLFLFTCTSAYIVAFIGLYIAKILLN
>NZ_CP008787.1|WP_002779147.1|1356540_1356765_+|ferrous-iron-transport-protein-A
MTLNELKDGQKAIIVNLNAHKELKNRLLSFGFIKNKNLKKIHSSLKNATIMVELDTSCVILRSDEAKTIEVNLI
>NZ_CP008787.1|WP_002877370.1|1355118_1356459_+|MmgE/PrpD-family-protein
MFYSEILADFIFNLKYENIPNTVVQRAKELMLDSLGTAIAASKEECVLNAFKAFENLSTDKNTPIWVNDQKLVPIYAAMLDGIASHALDFDDTHTEAILHASAILTPLCLSYGFHVNKDAKKIIKAFIVGWEIAARVGIASKGTFHKRGFHTTAIAGIFGSVSASAILLDLNKEQIINALGLAGSFASGVNEFLSNGSNSKVLHIANAIKNGIMVAHFAKNNMSGPLSIFEGRDNIFKCFGIEEECDKTELGKALGEIWQTMQVSIKPYPSCHFAHGLIDCAIALKNDGLKADEIKSIHCFVDEVPISFICDPLEAKYTPNSAYEAKFSMPFLMALGFFDGKITLDSYENLKREEVLEFAKKISYEKRKSQGFPKYFPGHLEASLQDGRIIQKDVFINKGNFDNPLSFEELKAKFLANAQIYLDNAKANKILDQIINLENLNHFSF
>NZ_CP008787.1|WP_014517092.1|1365210_1366581_-|phosphoglucosamine-mutase-PgmL
MLDVIFREYDIRGLYGKELNEKSVKAIGFCLGQTMLNKGCKNVSVGYDARYSANELFNYLVSGLNKAGIKIYDIGLVPTPLGYFSLYEGLKFDANVMITGSHNPKDYNGFKITINKESFFGEELKEFSKEVYKHLDDEIEENLEVEKYDILSLYVKFMCEQFSFLKDFNYKFGVDCTNGAAGVVIKPLIKALNLKAHVMFAEPDGQFPNHAPDPTEEENLSAIREFLNQNQDYSLAFAFDGDADRMVALSKTHVFCGDELCYLFAKNIPNPRILGEVKCSKNLFDEVAKFGTIFMGKTGHSNIKKMMKEKDIDLAAEVSGHIFFKHRYFGYDDGIYAFLRALELVYKGFDLESMIKALPKLYTTPEIKIHVNEEEKFKLVEEFQKEIEKGALKGVKSLCEIDGARIDFGDGWALLRASNTSPYLITRFEATSLERAKELESTVFSLFNEIKARLKN
>NZ_CP008787.1|WP_002855429.1|1366702_1367239_+|flagellar-basal-body-associated-protein-FliL
MDEELENEETKKKKGGSLVIIIVILLFVLLLSIMGVIAWLISSSSSDESEVKEAPKEEAKADKPKVSAPTQRGSDFANIGPMYPLDPFTLNLLSDSGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVSTQKGKERLKDELVGKINEILTDGFIKNVYFTDFVVS
>NZ_CP008787.1|WP_002825806.1|1367238_1367586_+|holo-ACP-synthase
MRVGCDIIAISRIEKIHSRHGKNFLDKFLSPKEQILIKNPATLAGLWAAKEAASKALGVGICELCSFFDIEISKDEKNAPKLKYSQKITKDFNITQTSLSISHDNGFAIAIVAIV
>NZ_CP008787.1|WP_002880391.1|1367586_1368006_-|hypothetical-protein
MKRVRVKIRANFRRRVKRTLKGSLKEKLAGTILLCAIVPLAVLGYLFIVIIGTFFNTARARQGVRALDHFVNASLFNGYAWESVSSHAWRERNRKKWARIVIKITDFFQKDHCKRANKREQPVVDFILSRNLDKQTIGK
>NZ_CP008787.1|WP_014517093.1|1368002_1369364_-|cytochrome-P450
MSECPFFPKPYKNKASTLLTFLLKRRSWLDGLYERSYKMQTGYVKMPNFDLYVINDTKEVKRMMVDEVREFPKSAFLHELLSPLLGESIFTTNGEVWKKQRELLRPSFEMTRINKVFNLMSEAVADMMDRFSKYPNHAVIEVDEAMTFITADVIFRTIMSSKLDEGKGKKILNAFVTFQEQSVHTAMRRMFRFPKWLSYVLGDRKRTKAGDVIRQVLSDIIKPRYDMADNAEFEDILGSLLLVVDADTNKRFSFEEILDQVAMLFLAGHETTASSLTWTLYLLSLYPKEQEKAYEEITQVLQGGAIEISHLRQFKYLTNIFKESLRLYPPVGFFAREAKKDTQVRDKLIKKGSGVVIAPWLIHRHEEFWTNPHGFNPSRFEGEYKKDAYLPFGVGERICIGQGFAMQEAILILANILKTYKLELEEGFVPDVVGRLTVRSANGMRIKFSKRKL
>NZ_CP008787.1|WP_014517094.1|1369360_1370482_-|membrane-protein
MDREVFYIAGYDPKSYRFYYDLFKKNLKDYSHAFNIKTDLSKIEKNEQFPFFQISCEGVQTKYHFLTWNDIVKKNWSENYKDALADCYSFFRIYTITGLFIKFGKESIYQLITGYYPFFYVLFSLLFSLVLAFGSFAFLQNYMHFSLAIIIGCFLGFLLNHFLFKLGKKLAVFWIARICAFCATWQDKKIGTMQERIKLFANVIVEKLKQNESKQDYELILVAHSVGTIVCIEVLEYILRQHLDLSLLCKLKILTLGECIPLVSYQKKADEFRKKLEFVSRFDLKWYDYTSIIDGACFPQVDFFRTSGVNAKFTPPFLSAKFHTLYEKHEYKKIKRDKNKAHFLYLYSISVKGDYDFFSFIIMPKFLEEKVKI
>NZ_CP008787.1|WP_014517095.1|1370554_1371739_-|capsule-polysaccharide-modification-protein-KpsS
MRFSTKIKKEFSGKNVLLLQGPVGNFFHHLSMKMKKNQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYKDFFQSKKIDAILMYNDCRIIHAKAIKVAKELGIEVWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQSIFTKESIKEIPGGFKFMAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYHYKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINSTVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK
>NZ_CP008787.1|WP_014517098.1|1373053_1373545_-|hypothetical-protein
MNFKTLSILLFFVNFFVACSDDSMLSCDDTQVLDFLEQEEKGQIYQDIMQNLKYTNRVNLDYFSIEPELSKATQEALQEFVNSVDISYSFFIAESIDEKTKKSVCSAVETLRFPRESEKLFKLSIQDLENAFNSKMKLQEENDAIYQAKFCVAISLIQKIIIN
>NZ_CP008787.1|WP_153610262.1|1374242_1374383_-|hypothetical-protein
MEDDLMSDDNLETYFRLLSIPWAYIPFDNDLQCFENFVKDIIIRNF
>NZ_CP008787.1|WP_038402171.1|1375076_1376369_+|FAD-dependent-oxidoreductase
MKVKNYIILGAGIAGISVAYHLKQKNISSIIYEKNHYFGGLCSSFKINDFIFDNAVHLSFTKDEYVKKLFSNSCRVISHKPPKISNYYKGYWLKHPAQNNLEPLELKEKIDIISDFCENPYKNIEINNYEDWLKAQYGKYFSQNFTMRYTRKYWNIEAKDLSTSWVGSRMYKPNISEVLKGAFEKETPNTYYADEMRVPQYGGYQSFLNLMAKECNIQYDKEIIEINPANKMIYFKDGSFKNYDVLVSTLPLPEYAKLIKNIPNEISLACQKLKYTSVVLVSLGFSKPDIAKHIWFYIYDEDILPARCYSPNKKSPYNVPKNCSSLQFEIYFSQDKPLNFDENEIIKKVVNQGKKMGIFCEEDIILKDYRILPYGNVIFYHNMEKDREKIRNFLESCNIHTAGRFGKWEYLWSDQSLLSGKEVAEKLYEL

Crispr_ID: NZ_CP008787_2

• CRISPR_ID: NZ_CP008787_2
• CRISPR_location: 1466709-1466942
• CRISPR_type: TypeII
• Repeat_type: NA
• Spacer_info: 3 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NZ_CP008787_2

Consensus_repeat	Method
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRT
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	CRISPRCasFinder

spacers of NZ_CP008787_2

>2.1|1466745|30|NZ_CP008787|CRT
TGATTTATTAGTAACCCATCAAGTTGGCTT
>2.2|1466811|30|NZ_CP008787|CRT
GCTTTAGGAAATGCTTTAAAACGCTTTGGA
>2.3|1466877|30|NZ_CP008787|CRT
AATAATGATATCGAAGTTATTAATCTAATT
>2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder
TGATTTATTAGTAACCCATCAAGTTGGCTTG
>2.5|1466811|31|NZ_CP008787|PILER-CR,CRISPRCasFinder
GCTTTAGGAAATGCTTTAAAACGCTTTGGAG
>2.6|1466877|31|NZ_CP008787|PILER-CR,CRISPRCasFinder
AATAATGATATCGAAGTTATTAATCTAATTG

CRISPR arrays and Neighbor proteins around NZ_CP008787_2

CRISPR arrays

The CRISPR arrays of NZ_CP008787_2

>merge|NZ_CP008787|2|1466709-1466942|CRT,PILER-CR,CRISPRCasFinder
TTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATTGATTTATTAGTAACCCATCAAGTTGGCTTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATGCTTTAGGAAATGCTTTAAAACGCTTTGGAGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAATAATAATGATATCGAAGTTATTAATCTAATTGTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP008787|2|1|1466709-1466942|CRT
TTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TGATTTATTAGTAACCCATCAAGTTGGCTT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCTTTAGGAAATGCTTTAAAACGCTTTGGA
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AATAATGATATCGAAGTTATTAATCTAATT
GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP008787|2|1|1466710-1466942|PILER-CR
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TGATTTATTAGTAACCCATCAAGTTGGCTTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCTTTAGGAAATGCTTTAAAACGCTTTGGAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AATAATGATATCGAAGTTATTAATCTAATTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

>NZ_CP008787|2|2|1466710-1466942|CRISPRCasFinder
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	TGATTTATTAGTAACCCATCAAGTTGGCTTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	GCTTTAGGAAATGCTTTAAAACGCTTTGGAG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT	AATAATGATATCGAAGTTATTAATCTAATTG
TTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008787.1|WP_002867070.1|1474078_1475068_-|phosphoribosylformylglycinamidine-cyclo-ligase	unknown	unknown	gnl|CDD|235439
NZ_CP008787.1|WP_002877301.1|1476454_1477189_+|glucosaminidase-domain-containing-protein	unknown	unknown	gnl|CDD|225539
NZ_CP008787.1|WP_002867063.1|1465402_1466593_+|molybdopterin-molybdotransferase-MoeA	unknown	unknown	gnl|CDD|223380
NZ_CP008787.1|WP_002867072.1|1475730_1476480_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|234768
NZ_CP008787.1|WP_002851264.1|1457290_1457932_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319893
NZ_CP008787.1|WP_002867071.1|1475128_1475734_+|dephospho-CoA-kinase	unknown	unknown	gnl|CDD|234620
NZ_CP008787.1|WP_002877469.1|1461915_1463064_-|carboxynorspermidine-decarboxylase	unknown	unknown	gnl|CDD|273414
NZ_CP008787.1|WP_002851537.1|1460732_1460924_-|twin-arginine-translocation-signal-domain-containing-protein	unknown	unknown	gnl|CDD|236534
NZ_CP008787.1|WP_012006786.1|1468398_1471353_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226044
NZ_CP008787.1|WP_002867061.1|1464730_1464952_+|MoaD/ThiS-family-protein	unknown	unknown	gnl|CDD|224888
NZ_CP008787.1|WP_002867062.1|1464952_1465399_+|molybdenum-cofactor-biosynthesis-protein-MoaE	unknown	unknown	gnl|CDD|223391
NZ_CP008787.1|WP_002855824.1|1456361_1457294_-|formate-dehydrogenase-subunit-gamma	unknown	unknown	gnl|CDD|130645
NZ_CP008787.1|WP_002867064.1|1467511_1468402_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NZ_CP008787.1|WP_002867060.1|1463187_1464729_+|multicopper-oxidase-CueO	unknown	unknown	gnl|CDD|225043
NZ_CP008787.1|WP_012006787.1|1471559_1473017_+|C4-dicarboxylate-transporter-DcuC	unknown	unknown	gnl|CDD|225611
NZ_CP008787.1|WP_002867075.1|1477185_1478223_-|ATP-binding-protein	unknown	unknown	gnl|CDD|224292
NZ_CP008787.1|WP_022552433.1|1457928_1460733_-|formate-dehydrogenase-subunit-alpha	unknown	unknown	gnl|CDD|239153
NZ_CP008787.1|WP_012006785.1|1460898_1461612_-|molecular-chaperone-TorD-family-protein	unknown	unknown	gnl|CDD|225916
NZ_CP008787.1|WP_171770385.1|1467087_1467501_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP008787.1|WP_002779495.1|1473041_1474019_-|hypothetical-protein	unknown	unknown	gnl|CDD|340821

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP008787.1|WP_171770385.1|1467087_1467501_-|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	3.5e-55	180.0	0.7
NZ_CP008787.1|WP_012006786.1|1468398_1471353_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	0	1158.5	71.6
NZ_CP008787.1|WP_002867064.1|1467511_1468402_-|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	4.5e-98	322.5	8.6

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP008787.1|WP_002867070.1|1474078_1475068_-|phosphoribosylformylglycinamidine-cyclo-ligase	gnl|CDD|235439	PRK05385, PRK05385, phosphoribosylaminoimidazole synthetase; Provisional.	0
NZ_CP008787.1|WP_002877301.1|1476454_1477189_+|glucosaminidase-domain-containing-protein	gnl|CDD|225539	COG2992, Bax, Uncharacterized FlgJ-related protein [General function prediction only].	2.2203e-99
NZ_CP008787.1|WP_002867063.1|1465402_1466593_+|molybdopterin-molybdotransferase-MoeA	gnl|CDD|223380	COG0303, MoeA, Molybdopterin biosynthesis enzyme [Coenzyme metabolism].	1.19384e-142
NZ_CP008787.1|WP_002867072.1|1475730_1476480_+|diaminopimelate-epimerase	gnl|CDD|234768	PRK00450, dapF, diaminopimelate epimerase; Provisional.	4.20349e-93
NZ_CP008787.1|WP_002851264.1|1457290_1457932_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319893	cd16371, DMSOR_beta_like, uncharacterized subfamily of DMSO Reductase beta subunit family. This family consists of the small beta iron-sulfur (FeS) subunit of the DMSO Reductase (DMSOR) family. Members of this family also contain a large, periplasmic molybdenum-containing alpha subunit and may have a small gamma subunit as well. Examples of heterodimeric members with alpha and beta subunits include arsenite oxidase, and tungsten-containing formate dehydrogenase (FDH-T) while heterotrimeric members containing alpha, beta, and gamma subunits include formate dehydrogenase-N (FDH-N), and nitrate reductase (NarGHI). The beta subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons from the alpha subunit to a hydrophobic integral membrane protein, presumably a cytochrome containing two b-type heme groups. The reducing equivalents are then transferred to menaquinone, which finally reduces the electron-accepting enzyme system.	6.18245e-57
NZ_CP008787.1|WP_002867071.1|1475128_1475734_+|dephospho-CoA-kinase	gnl|CDD|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.80993e-71
NZ_CP008787.1|WP_002877469.1|1461915_1463064_-|carboxynorspermidine-decarboxylase	gnl|CDD|273414	TIGR01047, carboxynorspermidine_decarboxylase, carboxynorspermidine decarboxylase. This protein is related to diaminopimelate decarboxylase. It is the last enzyme in norspermidine biosynthesis by an unusual pathway shown in Vibrio alginolyticus. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP008787.1|WP_002851537.1|1460732_1460924_-|twin-arginine-translocation-signal-domain-containing-protein	gnl|CDD|236534	PRK09476, napG, quinol dehydrogenase periplasmic component; Provisional.	0.00441722
NZ_CP008787.1|WP_012006786.1|1468398_1471353_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP008787.1|WP_002867061.1|1464730_1464952_+|MoaD/ThiS-family-protein	gnl|CDD|224888	COG1977, MoaD, Molybdopterin converting factor, small subunit [Coenzyme metabolism].	1.67964e-11
NZ_CP008787.1|WP_002867062.1|1464952_1465399_+|molybdenum-cofactor-biosynthesis-protein-MoaE	gnl|CDD|223391	COG0314, MoaE, Molybdopterin converting factor, large subunit [Coenzyme metabolism].	1.04214e-42
NZ_CP008787.1|WP_002855824.1|1456361_1457294_-|formate-dehydrogenase-subunit-gamma	gnl|CDD|130645	TIGR01583, Formate_dehydrogenase_cytochrome_b556_subunit, formate dehydrogenase, gamma subunit. This model represents the gamma chain of the gamma proteobacteria (and Aquifex aolicus) formate dehydrogenase. This subunit is integral to the cytoplasmic membrane, consisting of 4 transmembrane helices, and receives electrons from the beta subunit. The entire E. coli formate dehydrogenase N (nitrate-inducible form) has been crystallized. The gamma subunit contains two cytochromes, heme b(P) and heme b(C) near the periplasmic and cytoplasmic sides of the membrane respectively. The electron acceptor quinone binds at the cytoplasmic heme histidine ligand. NiFe-hydrogenase and thiosulfate reductase contain homologous gamma subunits, and these can be found scoring in the noise of this model. [Energy metabolism, Anaerobic, Energy metabolism, Electron transport].	4.52433e-86
NZ_CP008787.1|WP_002867064.1|1467511_1468402_-|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.27175e-120
NZ_CP008787.1|WP_002867060.1|1463187_1464729_+|multicopper-oxidase-CueO	gnl|CDD|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	1.1439e-117
NZ_CP008787.1|WP_012006787.1|1471559_1473017_+|C4-dicarboxylate-transporter-DcuC	gnl|CDD|225611	COG3069, DcuC, C4-dicarboxylate transporter [Energy production and conversion].	2.86452e-71
NZ_CP008787.1|WP_002867075.1|1477185_1478223_-|ATP-binding-protein	gnl|CDD|224292	COG1373, COG1373, Predicted ATPase (AAA+ superfamily) [General function prediction only].	1.51502e-33
NZ_CP008787.1|WP_022552433.1|1457928_1460733_-|formate-dehydrogenase-subunit-alpha	gnl|CDD|239153	cd02752, MopB_Formate-Dh-Na-like, Formate dehydrogenase N, alpha subunit (Formate-Dh-Na) is a major component of nitrate respiration in bacteria such as in the E. coli formate dehydrogenase N (Fdh-N). Fdh-N is a membrane protein that is a complex of three different subunits and is the major electron donor to the nitrate respiratory chain. Also included in this CD is the Desulfovibrio gigas tungsten formate dehydrogenase, DgW-FDH. In contrast to Fdh-N, which is a functional heterotrimer, DgW-FDH is a heterodimer. The DgW-FDH complex is composed of a large subunit carrying the W active site and one [4Fe-4S] center, and a small subunit that harbors a series of three [4Fe-4S] clusters as well as a putative vacant binding site for a fourth cluster. The smaller subunit is not included in this alignment. Members of the MopB_Formate-Dh-Na-like CD belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP008787.1|WP_012006785.1|1460898_1461612_-|molecular-chaperone-TorD-family-protein	gnl|CDD|225916	COG3381, TorD, Uncharacterized component of anaerobic dehydrogenases [General function prediction only].	0.000581315
NZ_CP008787.1|WP_171770385.1|1467087_1467501_-|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	2.3054e-55
NZ_CP008787.1|WP_002779495.1|1473041_1474019_-|hypothetical-protein	gnl|CDD|340821	cd03789, GT9_LPS_heptosyltransferase, lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.05794e-09

Protein sequences

>NZ_CP008787.1|WP_002867063.1|1465402_1466593_+|molybdopterin-molybdotransferase-MoeA
MLMSYEESLKILHSHIKTYEKIEKIALTECLGRILAQDIKAPKNQPEFPTSAMDGYAIKFEDQDKPLKILGLTPAGTMPQFSVQNGTCVKTFTGSLMSEGSDTLVPVENVRVENDTLFIEKKVPQAFAVRAVGENYKKDEILLKKGTKLNYSEIALLAELGFFHISVFIKPIVGVLSSGSEIKDLGEALENPAQIRSSNHIAIANLAKNLNCDTRVFPLLKDDEKATFSTLESALQSCDILITTGGVSMGDFDFLKKAVKEYEIIIDKADIKPGRHIKIAKANEKFIIALPGFPYSAMVMFNLYAREILNSWLLQPKDYICKAFLQGSYKKKTPYLEFVACNVEFKNGRILANLEGKKEGSSAIINNLNNKAALMVVPKECEILENESLVDIIFMP
>NZ_CP008787.1|WP_002867062.1|1464952_1465399_+|molybdenum-cofactor-biosynthesis-protein-MoaE
MKHFTLYQGSLDIPKIYSQWYEFAKDKNCGALLTFCGIVREEGGIEALSFDIYEPLLKKWFDEWQKRVDFDDISLLFAHSIGDVAVHESSYFAGILSKQRKLGLKLLNEFVEDFKASAPIWKYDVINKERIYAKERSTKLCGAGLLKG
>NZ_CP008787.1|WP_002867061.1|1464730_1464952_+|MoaD/ThiS-family-protein
MIKVEFLGPINKENLELEVKNLKELKEILQKDESLKEWLELCAVSLNDEIIFDENTKLKDGDKIALLPPVCGG
>NZ_CP008787.1|WP_002867060.1|1463187_1464729_+|multicopper-oxidase-CueO
MNRRNFLKFNALTLASMGVAYANPMHDMHSMHKNHSINHDLDTSFINFAPKNLKLLDPKQFPQGEILKALPLLKNESKEKNIFRATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPPDQDGSPHDPILAGKERIYHFEIPQDSAGTYWYHPHPHYTTSKQVFMGLAGAFVIKAKKDALSHLKEKDLMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQFKPKIKLATNERIRIYNATAARYLNLRIQGAKFILVGTDGGLIEKAIYKEELFLSPASRVEVLIDAPKDGNFKLESAYYDRDKMMVKEEPNTLFLANISLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQMHGMMGKSESELKIALASMFLINGKSYDLKRIDLSSKLGVVEDWIVINKSHMDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVKE
>NZ_CP008787.1|WP_002877469.1|1461915_1463064_-|carboxynorspermidine-decarboxylase
MFYEKIQTPAYILEEDKLRKNCELLASVGEKSGAKVLLALKGFAFSGAMKIVGEYLKGCTCSGLWEAKFAKEYMDKEIHTYSPAFKEDEIGEIASLSHHIVFNSLAQFHKFQSKTQKNSLGLRCNVEFSLAPKELYNPCGRYSRLGIRAKDFENVDLNAIEGLHFHALCEESADALEAVLKVFKEKFGKWIGQMKWVNFGGGHHITKKGYDVEKLIALCKNFSDKYGVQVYLEPGEAVGWQTGNLVASVVDIIENEKQIAILDTSSEAHMPDTIIMPYTSEVLNARILATRENEKISDLKENEFAYLLTGNTCLAGDVMGEYAFDKKLKIGDKIVFLDQIHYTIVKNTTFNGIRLPNLMLLDHKNELQMIREFSYKDYSLRN
>NZ_CP008787.1|WP_012006785.1|1460898_1461612_-|molecular-chaperone-TorD-family-protein
MEALMDLEKLRLARSLYYQCLGELFVFSFSEERLSKLQEYLKTMQECLFDENLKSNFDILLKHLDDENSIQAFFKEYDLLFLSLKNSIPTTFSYIEEGFENSNPLLCVRQILVKSKIRRNEKFFKESEDSVGFCLLLMSEFLRQNEDDLAKELFEKVINKSIDEFLGDVFMNKNANLYKEIASIAMAFMEFERLCFEVEKPAKINSKKVQNDLSRSEFLRREANKQRRTREKSQGIS
>NZ_CP008787.1|WP_002851537.1|1460732_1460924_-|twin-arginine-translocation-signal-domain-containing-protein
MKNRREFLKKSAFALGAAGVLGSTTLALAKDEERKDLVKGKSKKKEVLFQRSANWENYYIKAE
>NZ_CP008787.1|WP_022552433.1|1457928_1460733_-|formate-dehydrogenase-subunit-alpha
MSSVGENIKLTRRSFLKMAALSSLATPLLARSETLREASADELKEAYEGSKKVKTVCTACSVGCGIIAEVQNGVWVRQEIAQDHPVSSGGHCCKGSDMIDMVRSHVRLKYPMKKENGEWKRISYEQALSEIGEKLAAYRKENPESVMFLGSAKMSNEQAYYVRKFAAFFGTNNVDHQARIUHSATVAGVANTFGYGAMTNHLGDIQRSKCIIIIGANPAVNHPVGFRHFLKAKEKGAKLIVVDPRFTKSAAKADIYARIRPGTDIAFMYGMLKIIFDEGLEDTKYLDERVFGIDKIREEAAKWTAEEVENVTGISKELLVQITHEVAKNKPTTLIWAMGLTQHTVGTSNTRLAPIVQMVLGNIGKFGGGVNILRGHDNVQGASDMACLSENLPGYYPLNEATWRYYAKIWGVDYEWLLGNFVSKDWMHKTGLSLARWWAAALNGKDGNDAIDNAGTPLKALVVMGNGITSTAQQVKVKEGLEALELLVLADPFVNEAGIIAERKDGIYLLPAATQFETSGSVTATNRSGQWRFKVVDPLYESMEDQEILFELAKKLGFYEDFTKTLRDEKGEIVWPENATREIAKAVRSIGLNGWSPERLKKHTLYWDKFDEVTLEGKDEVAGEYYGLPWPCWSDKHPGSPVLYNTDIEVAKGGMGFRNNFGLEYEGESLLAKNAPLNSPIDTGYPQITKDNIEKVLGITLSAQEKEKMGSTWSYDDSNIIATKCIEKGIVPYGNAKARAVVWTFKDKIPLHREPLHSPRNDLVQKYPSFEDQKALYRVDTKFVSVQQAKDYSKEFPLNLVTARLVNLNGAGMENRASMYLTRLTPEMFCEINPELAKEQDIKAGDMIWVHSPEGTKIHVRVKVNPGVAKDMIFLPFHFTGVMQGVDLTHNFPKGTKPYASGESANTVTNYGYDIMCQIPETKGGLCRISKDGK
>NZ_CP008787.1|WP_002851264.1|1457290_1457932_-|4Fe-4S-dicluster-domain-containing-protein
MSKVNFANLEKERLKFFCDNERCIDCNGCAVACDEAHELPIHIRRRRVITLNEGIQGKEVSTSISCMHCDDAPCSIVCPVDCFYIRADGIVLHDKEICIGCGYCLYACPFGAPQFPKDSVFGNKGIMDKCTMCAGGPEATNSEKERELYGQNRIAEGKVPVCAAMCSTKALLVGESSKIEEIYHNRLMNRNYGIPNPSESLEWKIAYTGKERL
>NZ_CP008787.1|WP_002855824.1|1456361_1457294_-|formate-dehydrogenase-subunit-gamma
MRKVFVTLLLSVASLFAYGSERMGQDTQIWDFHRITNIPNYDTFGKLWTTLQGEYIATIALIAVIAVLSAFALHYMVIGPKQFSHDGKKIYAFTLFERLFHFIAAISWVILVPTGFVMMFGATFGGGLFVRVCKNLHAFATVLFIISIIPMFLWWIKRMLPASYDIRWMMIVGGYLSKVKRPVPAGKFNFGQKSWYYIAVFGGFLMIITGGFMYFLDFNSTAIQGLFGLTQIELLRISAIVHNFLGIVCAVFFGVHIYMAVFAIKGSIHSMISGYKEEEEVYILHSYWYKELSNKKQIEPSFSYDPNVKI
>NZ_CP008787.1|WP_171770385.1|1467087_1467501_-|CRISPR-associated-endonuclease-Cas2
MRVLLMFDVPTKSKKEQKLASKFRNNLIKLGYFMLQFSVYMRICKGLSSAKSSIENVKKILPPYGNVRALIITEKQFDKMELLLGGIVFNEKVNNETNLTLFDIDSHGEFKYKNSNNEEIQLNKKQEKYHQQNLFEF
>NZ_CP008787.1|WP_002867064.1|1467511_1468402_-|type-II-CRISPR-associated-endonuclease-Cas1
MSYDEAFKTLLISSNAKLNLELNHLVIKQDENIAKLFLKDINIIVLESLQVSLSSALFNAFARHKIILLTCDETHSINGVFTPFLGHFQSAKIAKEQMNVSAQKKAILWQKIIKNKILNQAFVLKKHNKIGQSNELINLAKKVSLNDSKNIEAVAAALYFKTLFGVSFSRDELCFENSALNYGYAIIRACIIRAVCISGLLPWLGIKHDNIYNSFALCDDLIEVFRASVDDCVLKLKGESEFLSKDDKRALIGNLQSKINFDGQNYPLNRAINHYVANFKNALLYEDELKIVKFDD
>NZ_CP008787.1|WP_012006786.1|1468398_1471353_-|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MARILAFDIGISSIGWAFSENDELKDCGVRIFTKAENPKTGESLALPRRLARSARKRLARRKARLNHLKHLIANEFKLNYEDYQSFDESLAKAYKGSLISPYELRFRALNELLSKQDFARVILHIAKRRGYDDIKNNGDEEKSEILKAIKQNEEKLVNYQSVGEYLYKEYFQKFKENSKEFINVRNKKESYERCITQSFLKDELKLIFQKQREFGFSFSKKFEEEVLSVAFYKRALKDFSHLVGNCSFFTDEKRAPKNSPLAFMFVALTRIINILNNLKNTEGILYTKDDLNALLNEVLKNGTLTYKQTKKLLGLSDDYEFKGEKGTYFIEFKKYKEFIKALGEHNLSQDDLNEIAKDITLIKDEIKLKKALAKYDLNQNQIDSLSKLEFKDHLNISFKALKLITPLMLEGKKYDEACNELNLKVAINEDKKDFLPAFNETYYKDEVTNPVVLRAIKEYRKILNALLKKYGKVHKINIELAREVGKNHSQRAKIEKEQNENYKAKKDAEIECEKLGLKINSKNILKLRLFKEQKEFCAYSGEKIKLSDLQDEKMLEIDHIYPYSRSFDDSYMNKVLVFTKQNQEKLNKTPFEAFGNDSTKWQKIEVLAKNLPEKKQKRILDKNYKDKEQKDFKDRNLNDTRYIARLVLNYTKDYLDFLPLSDDENTKLNDTQKGSKVHVEAKSGMLTSALRHTWGFSAKDRNNHLHHAIDAAIIAYANNSIVKAFSDFKKEQESNSVELYAKKISELDYKNKRKFFEPFSGFRQKVLDKIDEIFVSKPERKKPSGALHEETFRKEEEFYQSYGGKEGVLKALELGKIRKVNGKIVKNGDMFRVDIFKHKKTNKFYAVPIYTMDFALKVLPNKAVARSKKGEIKDWILMDENYEFCFSLYKDSLILIQTKDMQEPELVYFNAFTSSTVSLIVSKHDNKFETLSKNQKILFKNANEKEVIAKSIGIQNLKVFEKYIVSALGEVTKAEFRQREDFKK
>NZ_CP008787.1|WP_012006787.1|1471559_1473017_+|C4-dicarboxylate-transporter-DcuC
MPIFMICSTLLAVIVVAYYILKKYNPIFVFFLSGIILLIFAFYITGTPIPKAPSREHASFLNVLLDSYAFITATFKSQLSGVGLIIMSVAGFAAYMKHINASAKLAFLANKPLGKIKNKYLILSGTFVVGMALKIVISSYAGLLLLLLACIYPVLISLKIRPITAVCVLSLIALDYGPKDGNSINMADMVGQSDNVVGLFLNYQIYSVIAYVVVIAILIPFYFAWIDKRDKEKGVLNDEVEIPQIIDPRCPTFYILFPWLPVVFLFTAYFFTIKLDVVTANFVSISLVFLVEFARHRNARKLGEDMMVILKAMAEIFISVVSIIIAAGVFAEGIKALGGVNILANAVSNLGTGNFAWFGILLSIAILSFLVYFATVIMGSGIAAFNAFGKLAPDIATKLGVAPITLVLPIEIASCLGRAASPIAGGIIALAGFAKVAPMDIIKRTTPLLLIAMLVNVLVAFYLAQTNPLPKEQNTTKIAVSLNNK
>NZ_CP008787.1|WP_002779495.1|1473041_1474019_-|hypothetical-protein
MKNIVFHSDGFGDLLVCFKALYAIKQLYPEYKLFLLTNGLMESDFLEKIPFIDEVLIYKDDFLEKIQSKNPVIFITTRRQGLYFKKLKFLNVQKCIVFPHLISIISKNLTTPLPFFRAKKHMSEIVLKLVRMINTRHFDKNFNQIDFSKIKNLLPYDARLSDNFFKQIDTKYEKIIGINAFSNNSEYRGFNFFIKDWIGLARQLSLKYPKFLFILLNFSTNSIQYNIDQNANLKVFCNNKNIASLVSISQKLDFLITVDTGNLHLCDILQIPTLAFTSSLAAYRFGGGSYGGRFDKLIVKPAWQKEYRKIYEIFTKKAENNLENL
>NZ_CP008787.1|WP_002867070.1|1474078_1475068_-|phosphoribosylformylglycinamidine-cyclo-ligase
MKISYEDAGVSIDNGNAFVEAIKPLVKETFNDNVVGGIGSFAGAFRMPSGFKKPVILGATDGVGTKLRLAIDAKKYDTIGQDLVAMCVNDLICNFATPLFFLDYYATVKLEVEVAKAVVSGIAKGCKMANCALIGGETAEMPGMYAKDDFDLAGFAVGMAEEDEIDRSKFVKNGDILLALPSSGLHSNGYSLARKVLFESLKLKFDDKIEGKNLIDILLEPTRIYVRDFLTLKPYISALAHITGGGLVENLPRVLPSGMGATIRKHHLKTPEIFYTIGQAVEESEMYRSFNMGVGLVMVVDPSNVSKVLENSDAFIIGEICINEGIVLE
>NZ_CP008787.1|WP_002867071.1|1475128_1475734_+|dephospho-CoA-kinase
MKNAFFVTASIACGKSTFIEIANSLGFKSISADKIAHEILDENALELEKIFSPFSLKNLLTKEKKIDRKILGEIVFNNKEAKKILENFTHPKIRAKILEQMQILDKENKAFFVEIPLFFESGAYENLGKVIVIYTPKELSLKRIMQRDKLSLEAAKARLDSQIDIEEKLKKADFIIKNTNSYADFRQECVKVIQEISKGKM
>NZ_CP008787.1|WP_002867072.1|1475730_1476480_+|diaminopimelate-epimerase
MKFYKYCASGNDFVITNADRKEDRSALAKELCNRYEGIGADGFIVILPHEKYDFEWEFYNNDGSRAAMCGNGSRAAAHFVHHINKINPNMSFLTGAGVIKAKVNQDKVEVSLGKIKSVQNTFEELGKTWQLCNTGVPHLVHFCQNLDEFDTMLCQKMRQKYNANVNFVKILDENHLKVRTYERGVEDETLACGTGMGACFYLAFLNKKVQNKVKITPKSGEEVGFAYKNEELFFEGKVKYCFEANYNFS
>NZ_CP008787.1|WP_002877301.1|1476454_1477189_+|glucosaminidase-domain-containing-protein
MKPIIIFLSLFLIPLFAADDLKSGFGEEYYKLDIDQKRQIFFTKMNEMFDQSFKKIEQERAFIEAFFKDAYKTGFRTSNQINLEKLITIKNKYRIENLYDFAEYKKRIQKIPKSMGIAQALVESATGTSRFAREANNLFGEWTWGEKGLIPDLRHPDKKHKIKIFDSLQDSVDSYVLNLNRHFAYEKFRDARAKFESEGKEITGLEAIKTLDSYSERKGYYINLITKIIKRYNLEKYDTNSNNT
>NZ_CP008787.1|WP_002867075.1|1477185_1478223_-|ATP-binding-protein
MKVLNFFYENHPKFEVSYERKNQISKPNIIIKGPRFCGKKTLIFNFLSQFKASEILFLDLYDTRFEKQSLERLADFLNENLQIKILCLYNLDFIPNLEKIKIPIILSTNIKDLNINGFEELELDYFDFEEFISVSKKNLPINNLVGLFLQSGRSKFGEKNILLRQSFTLLELEILKYLALNLGQQISISKIFIELKKRLKTSKDSVYQAIKKLENTYVIYTLKHDEKKLQKIYFKDFGLRNNLCISKDFSHLFENLVLSELFKFKEEFFYNKYFNFYSQISKIAYISSPTLDIDLIKLRAKKILPKALELGIFHVIFITLSSEDNFFEQGVKFEVISFDKFSLGF

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP008787_2	2.1|1466745|30|NZ_CP008787|CRT	1466745-1466774	30	NZ_CP014746	Campylobacter jejuni strain OD267 plasmid pCJDM67 S, complete sequence	12710-12739	0	1.0
NZ_CP008787_2	2.1|1466745|30|NZ_CP008787|CRT	1466745-1466774	30	CP013734	Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence	5197-5226	0	1.0
NZ_CP008787_2	2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466745-1466775	31	NZ_CP014746	Campylobacter jejuni strain OD267 plasmid pCJDM67 S, complete sequence	12709-12739	0	1.0
NZ_CP008787_2	2.1|1466745|30|NZ_CP008787|CRT	1466745-1466774	30	NZ_CP007184	Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence	13127-13156	1	0.967
NZ_CP008787_2	2.2|1466811|30|NZ_CP008787|CRT	1466811-1466840	30	MN530981	Campylobacter phage DA10, complete genome	7439-7468	1	0.967
NZ_CP008787_2	2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466745-1466775	31	CP013734	Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence	5197-5227	1	0.968
NZ_CP008787_2	2.5|1466811|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466811-1466841	31	MN530981	Campylobacter phage DA10, complete genome	7438-7468	1	0.968
NZ_CP008787_2	2.1|1466745|30|NZ_CP008787|CRT	1466745-1466774	30	NC_008770	Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir, complete sequence	4559-4588	2	0.933
NZ_CP008787_2	2.1|1466745|30|NZ_CP008787|CRT	1466745-1466774	30	NZ_CP010074	Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj2, complete sequence	10105-10134	2	0.933
NZ_CP008787_2	2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466745-1466775	31	NZ_CP007184	Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence	13126-13156	2	0.935
NZ_CP008787_2	2.1|1466745|30|NZ_CP008787|CRT	1466745-1466774	30	NC_017284	Campylobacter jejuni subsp. jejuni IA3902 plasmid pVir, complete sequence	4556-4585	3	0.9
NZ_CP008787_2	2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466745-1466775	31	NC_008770	Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir, complete sequence	4559-4589	3	0.903
NZ_CP008787_2	2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466745-1466775	31	NZ_CP010074	Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj2, complete sequence	10105-10135	3	0.903
NZ_CP008787_2	2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466745-1466775	31	NC_017284	Campylobacter jejuni subsp. jejuni IA3902 plasmid pVir, complete sequence	4556-4586	4	0.871
NZ_CP008787_2	2.2|1466811|30|NZ_CP008787|CRT	1466811-1466840	30	NZ_CP015333	Borrelia hermsii HS1 isolate Browne Mountain plasmid lpV47, complete sequence	32985-33014	6	0.8
NZ_CP008787_2	2.3|1466877|30|NZ_CP008787|CRT	1466877-1466906	30	MK284526	Bacillus phage DK1, complete genome	4801-4830	6	0.8
NZ_CP008787_2	2.3|1466877|30|NZ_CP008787|CRT	1466877-1466906	30	NZ_CP016375	Elizabethkingia anophelis strain F3201 plasmid unnamed, complete sequence	20797-20826	6	0.8
NZ_CP008787_2	2.6|1466877|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466877-1466907	31	MK284526	Bacillus phage DK1, complete genome	4800-4830	6	0.806
NZ_CP008787_2	2.3|1466877|30|NZ_CP008787|CRT	1466877-1466906	30	MT497068	Flavobacterium phage vB_Fsp_elemo14-3B, partial genome	16680-16709	7	0.767
NZ_CP008787_2	2.2|1466811|30|NZ_CP008787|CRT	1466811-1466840	30	AP013387	Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C42-MedDCM-OCT-S29-C52	5428-5457	8	0.733
NZ_CP008787_2	2.6|1466877|31|NZ_CP008787|PILER-CR,CRISPRCasFinder	1466877-1466907	31	MT497068	Flavobacterium phage vB_Fsp_elemo14-3B, partial genome	16679-16709	8	0.742
NZ_CP008787_1	1.1|1364852|34|NZ_CP008787|CRISPRCasFinder	1364852-1364885	34	MH752385	Bacillus phage Ray17, complete genome	8509-8542	10	0.706

1. spacer 2.1|1466745|30|NZ_CP008787|CRT matches to NZ_CP014746 (Campylobacter jejuni strain OD267 plasmid pCJDM67 S, complete sequence) position: , mismatch: 0, identity: 1.0

tgatttattagtaacccatcaagttggctt	CRISPR spacer
tgatttattagtaacccatcaagttggctt	Protospacer
******************************

2. spacer 2.1|1466745|30|NZ_CP008787|CRT matches to CP013734 (Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence) position: , mismatch: 0, identity: 1.0

tgatttattagtaacccatcaagttggctt	CRISPR spacer
tgatttattagtaacccatcaagttggctt	Protospacer
******************************

3. spacer 2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to NZ_CP014746 (Campylobacter jejuni strain OD267 plasmid pCJDM67 S, complete sequence) position: , mismatch: 0, identity: 1.0

tgatttattagtaacccatcaagttggcttg	CRISPR spacer
tgatttattagtaacccatcaagttggcttg	Protospacer
*******************************

4. spacer 2.1|1466745|30|NZ_CP008787|CRT matches to NZ_CP007184 (Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence) position: , mismatch: 1, identity: 0.967

tgatttattagtaacccatcaagttggctt	CRISPR spacer
tgatttattagtaacacatcaagttggctt	Protospacer
*************** **************

5. spacer 2.2|1466811|30|NZ_CP008787|CRT matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.967

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
gctttaggaaatgctttaaaacgctttggt	Protospacer
***************************** 

6. spacer 2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to CP013734 (Campylobacter coli strain OR12 plasmid pOR12Vir, complete sequence) position: , mismatch: 1, identity: 0.968

tgatttattagtaacccatcaagttggcttg	CRISPR spacer
tgatttattagtaacccatcaagttggctta	Protospacer
******************************.

7. spacer 2.5|1466811|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to MN530981 (Campylobacter phage DA10, complete genome) position: , mismatch: 1, identity: 0.968

gctttaggaaatgctttaaaacgctttggag	CRISPR spacer
gctttaggaaatgctttaaaacgctttggtg	Protospacer
***************************** *

8. spacer 2.1|1466745|30|NZ_CP008787|CRT matches to NC_008770 (Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir, complete sequence) position: , mismatch: 2, identity: 0.933

tgatttattagtaacccatcaagttggctt	CRISPR spacer
tgatttattagtaacacatcaagttgggtt	Protospacer
*************** *********** **

9. spacer 2.1|1466745|30|NZ_CP008787|CRT matches to NZ_CP010074 (Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj2, complete sequence) position: , mismatch: 2, identity: 0.933

tgatttattagtaacccatcaagttggctt	CRISPR spacer
tgatttattagtaacacatcaagttgggtt	Protospacer
*************** *********** **

10. spacer 2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to NZ_CP007184 (Campylobacter coli RM1875 plasmid pRM1875_35kb, complete sequence) position: , mismatch: 2, identity: 0.935

tgatttattagtaacccatcaagttggcttg	CRISPR spacer
tgatttattagtaacacatcaagttggctta	Protospacer
*************** **************.

11. spacer 2.1|1466745|30|NZ_CP008787|CRT matches to NC_017284 (Campylobacter jejuni subsp. jejuni IA3902 plasmid pVir, complete sequence) position: , mismatch: 3, identity: 0.9

tgatttattagtaacccatcaagttggctt	CRISPR spacer
tgatttattagtaacacatcaagttgggct	Protospacer
*************** *********** .*

12. spacer 2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to NC_008770 (Campylobacter jejuni subsp. jejuni 81-176 plasmid pVir, complete sequence) position: , mismatch: 3, identity: 0.903

tgatttattagtaacccatcaagttggcttg	CRISPR spacer
tgatttattagtaacacatcaagttgggtta	Protospacer
*************** *********** **.

13. spacer 2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to NZ_CP010074 (Campylobacter jejuni subsp. jejuni strain 01-1512 plasmid pCj2, complete sequence) position: , mismatch: 3, identity: 0.903

tgatttattagtaacccatcaagttggcttg	CRISPR spacer
tgatttattagtaacacatcaagttgggtta	Protospacer
*************** *********** **.

14. spacer 2.4|1466745|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to NC_017284 (Campylobacter jejuni subsp. jejuni IA3902 plasmid pVir, complete sequence) position: , mismatch: 4, identity: 0.871

tgatttattagtaacccatcaagttggcttg	CRISPR spacer
tgatttattagtaacacatcaagttgggcta	Protospacer
*************** *********** .*.

15. spacer 2.2|1466811|30|NZ_CP008787|CRT matches to NZ_CP015333 (Borrelia hermsii HS1 isolate Browne Mountain plasmid lpV47, complete sequence) position: , mismatch: 6, identity: 0.8

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
gctttaggaaatgctctaaaatgtctttaa	Protospacer
***************.*****.*..** .*

16. spacer 2.3|1466877|30|NZ_CP008787|CRT matches to MK284526 (Bacillus phage DK1, complete genome) position: , mismatch: 6, identity: 0.8

aataatgatatcgaagttattaatctaatt--	CRISPR spacer
aaaaatgatattgaagttattaatt--atcaa	Protospacer
** ********.************.  **.  

17. spacer 2.3|1466877|30|NZ_CP008787|CRT matches to NZ_CP016375 (Elizabethkingia anophelis strain F3201 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.8

aataatgatatcgaagttattaatctaatt----	CRISPR spacer
aattatgatatcgaagttatt----tcatttgaa	Protospacer
*** *****************    * ***    

18. spacer 2.6|1466877|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to MK284526 (Bacillus phage DK1, complete genome) position: , mismatch: 6, identity: 0.806

aataatgatatcgaagttattaat--ctaattg	CRISPR spacer
aaaaatgatattgaagttattaattatcaat--	Protospacer
** ********.************  ..***  

19. spacer 2.3|1466877|30|NZ_CP008787|CRT matches to MT497068 (Flavobacterium phage vB_Fsp_elemo14-3B, partial genome) position: , mismatch: 7, identity: 0.767

aataatgatatcgaagttattaatctaatt	CRISPR spacer
ttgtatgatatcgaagtaactaatctaatc	Protospacer
    ************* *.*********.

20. spacer 2.2|1466811|30|NZ_CP008787|CRT matches to AP013387 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G15, isolate: uvMED-CGR-C42-MedDCM-OCT-S29-C52) position: , mismatch: 8, identity: 0.733

gctttaggaaatgctttaaaacgctttgga	CRISPR spacer
actttaggaactgctttaaaaccagttact	Protospacer
.********* ***********   **.  

21. spacer 2.6|1466877|31|NZ_CP008787|PILER-CR,CRISPRCasFinder matches to MT497068 (Flavobacterium phage vB_Fsp_elemo14-3B, partial genome) position: , mismatch: 8, identity: 0.742

aataatgatatcgaagttattaatctaattg	CRISPR spacer
ttgtatgatatcgaagtaactaatctaatca	Protospacer
    ************* *.*********..

22. spacer 1.1|1364852|34|NZ_CP008787|CRISPRCasFinder matches to MH752385 (Bacillus phage Ray17, complete genome) position: , mismatch: 10, identity: 0.706

ttttttagctttatactcagccttactcatataa	CRISPR spacer
cttacaagctttatactcagccttattgatcgtt	Protospacer
.** . *******************.* **    

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	451169 : 461971	14	Campylobacter_phage(37.5%)	integrase	attL 444986:445000|attR 455370:455384
DBSCAN-SWA_2	475881 : 488374	12	Campylobacter_phage(77.78%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP008787|451169:461971|DBSCAN-SWA
TATGTCAAGAAGTACTCCTTTAAAAAAAGTTAGAAATATCGGTATTGCTGCTCACATTGATGCGGGTAAAACGACTACATCTGAAAGAATTCTTTTCTTTACAGGTATGAGTCATAAAATCGGTGAAGTTCATGATGGTGCTGCAACTATGGACTGGATGGAACAAGAGAAAGAGCGTGGGATTACTATCACTTCTGCGGCTACAACTTGTTTTTGGAAAGATCATCAAATCAATCTTATTGACACTCCAGGCCACGTGGATTTTACAATTGAAGTTGAAAGATCTATGCGTGTTCTTGATGGTGCTGTTGCGGTATTTTGTTCAGTGGGTGGGGTGCAGCCTCAAAGTGAAACAGTTTGGAGACAAGCAAATAAATACGGTGTTCCAAGAATAGTATTTGTAAATAAAATGGATAGAATCGGTGCAAATTTTTATAATGTAGAAGATCAAATTCGCAACCGTTTAAAAGCTAATCCAGTTCCACTTCAAATTCCAATTGGTGCTGAGGATAATTTTAAAGGCGTAATCGATCTTGTAACTATGAAAGCTTTAGTTTGGGAAGATGATACTAAGCCAACGGATTATGTAGAAAAAGAAATTCCAGCTGAACTTAAAGAAAAGGCAGAAGAATATCGCACAAAAATGATAGAAGCAGTTTCTGAAACTTCAGATGAGTTGATGGAAAAATATTTAGGCGGAGAAGAATTAAGCCTTGAAGAGATTAAAACAGGGATTAAAGCAGGATGTTTAAGTCTTTCTATCGTTCCTATGCTTTGCGGTACAGCGTTTAAAAATAAAGGGGTTCAACCTTTACTTGATGCTGTTGTGGCTTATTTGCCAGCTCCTGATGAAGTGGCAAATATCAAGGGTGAATATGAAGATGGCGCAGAAGTTTCTGTAAAATCAACTGATGATGGCGAGTTTGCAGGGCTTGCATTTAAAATCATGACAGATCCATTTGTAGGACAACTTACTTTCGTGCGTGTTTATCGCGGTTGTTTAGAAAGCGGTTCTTATGCATATAACTCAACTAAAGATAAAAAAGAAAGAATTGGTCGTTTGTTAAAAATGCACTCTAACAAAAGAGAAGAGATTAAAGTGCTTTACGCAGGCGAAATTGGTGCTGTTGTAGGACTTAAAGATACTTTAACAGGGGATACTCTTGCAAGTGAAAAAGATAAGGTAATCCTTGAAAGAATGGATTTTCCAGATCCAGTTATTTCTGTTGCAGTTGAGCCAAAAACTAAAGCTGATCAAGAAAAAATGTCTATTGCTTTAAATAAATTAGCACAAGAAGATCCAAGTTTTAGAGTTTCTACAGATGAAGAAAGTGGTCAAACTATCATTTCAGGTATGGGTGAGTTACACCTTGAAATTATCGTTGATAGAATGCTTCGTGAATTTAAAGTTGAAGCTGAAGTAGGTCAACCACAAGTTGCTTATCGCGAAACTATTAGAAAAACTGTTGAACAAGAATACAAATACGCTAAACAATCAGGTGGTCGTGGTCAGTATGGACATGTATTCTTACGCCTTGAACCACTTGAGCCAGGTAGTGGATATGAATTTGTTAATGATATCAAAGGTGGGGTAATTCCAAAAGAATACATTCCTGCAGTTGATAAAGGTGTTCAAGAAGCATTACAAAATGGTGTTTTAGCAGGTTATCCTGTGGAAGATGTTAAAGTAACTGTTTATGATGGAAGTTATCACGAGGTGGATTCATCTGAGATGGCATTTAAACTTGCTGCTTCTATGGGCTTTAAAGAAGGTGCTAGAAAAGCAGGTGCTGTGATCTTAGAGCCTATGATGAAAGTTGAAGTAGAAACTCCTGAAGATTATATGGGTGATGTTATTGGAGATCTTAACAAACGCCGTGGTCAAGTAAATAGCATGGATGAGCGTGGTGGAAATAAAATCATCACAGCATTTTGTCCTTTGGCTGAAATGTTTGGTTATTCTACTGATCTTAGAAGTCAAACTCAAGGTCGTGCGACTTATTCTATGGAATTTGATCACTATGATGAAGTTCCTAAAAATGTTGCGGATGAAATCATCAAAAAAAGAAACGGTTAAATTTTTAGCGGGATTTTTCCCGCTTTCTGTCCTCGTAGCTCAGCAGGATAGAGCGCAAAATTCCTAATTTTGAGGCCGTGAGTTCGAATCTCGCCGTGGACACCAAGTAGTAATTCATTAAGTAATATTAAGATACAAAATACACTATTTTAACAACTTTTCTACATTAAAATTTTTCATTATGATTGAAATTTTTTCTATTTTTTCTTATAATTCTGTAGCCATTTATGTAGCCAAAGTAAAAAAGCTAATTCTGGCTACAAAAATACTAAAAAAAGGTTTTTTTAATGCTAACTCAAAAAGATATAGACAATTTAGAAATAAAAGATAAAAGGTATATGATTAGCGTAGGAGAACCAAAAGAATTATATGTCCGAGTTAATCCAACGGGTAAAAAAGTTTTTTATTTAAGAGCTTCAAAATTTAAAAATTTTATAACAATAGGGGAATGCCAAAAAGGTGTTTTAAATGTTACAAATGCAAGAGAAAAAGCAAAAGATCTTTTAAAATCAATGTATGATGGAAAATTTATCGGCAAAAATGATAAGGTTATGACACTTGAAAAAGCAAATTTTCTTTATGTTGATATAAAATCTAAAAAATTAAATTCAGCTACAATTAAAAAAGAACAGTCAATTTTTAAAAAATATATTATTCCAACTTTGGGACAAAAAGATATAAATGAATTGAAAAAAGATGATTTTTTACCTATTTATGATTTAATGCAGAAAAAAGGAATATACGAAACAATAAATAAAAATATATCTTTGCTATGTAGGATATTTGAGATTAGTAGACAAAGAGGTGACTTAAAAACAGATATAATACTTCAATTGAAAGATTTAAAGAAATTTTACAATGAAGCAAATCACAATAAAGTTAAACATTTTAAAGCTATAGTAGAAGAACAAGAAATAAGAAATATGTTAGAATGTATGAAAGAATATAAAAATCATCCACGGACAAATACAACTATAATTAATGCAATTTATTTTACGCTTTTGACAGCACAAAGAAGTAAAAATATTCGATTTGCTAAATGGAGTGATATTGACTTTGAAAACAATCTTTGGATTATAAAAGCAGATGAAATGAAAGTAAGATCTAATGGTGATAATATTATCCCTTTAAATAAATATGCTTTAAAGATACTAGATATGCAAAGAATTTTAAATGGAGATAAAAAGTATATTTTCGCTAATAATAATGGAACTATTAGCGAGAATTTTGCTGTAAGATTTTTTAAATTTTATAATTTAGAGCACACTATACATGGATATCGTTCTACTTTTAGAAGTGTTTATACTAATAAAAGCAATGAGTTAATTCAGCAAGGTATTAGTAAAGATATAGCAGAAATGATATTACATCATATAAGCGGTAATGAAATAGAAAGGGCTTACAACAGAGCCAAGGCAATTGATTTAAGAGTAAAACTTATGCAATGGTATGGAAATTACTTAAACTCTCTTTGTGAGTTTTGCTTTTAATGTCTTTTAGCTTTAAGCCATTTTTCTATTTCTTTTATTTCATATCTTATGGATTTTCCTATGCGAATGTAAGGTATTTTACCATCTTGTCTTAACTTAAATAATGATGTTATACTAACTCCTAAATATTCGCTCAATTCTTTTTCTCTAAAATATTTTTTAACCATTTTCAACTCCTAATCTTTTATCTATAATTTCAAAAATAGTATCCTTGTAATAATTCCAAAGCCATTTCTGTTCTTCATCTTCTAAATCATCAACGCTTAAATTACGCCATTCTTTTATTGTTTTAGTATCACAACCTAAATTCATCATAGTTTTTGTAAAAGTCATAACATAGGTATCCAAGACAACGCTAAAGATATTTTTCATATCTCCTATACAATCCCTAAGATCTACATTTTCAAATATACAATTTTCAAATTCTGTTCTTAGAAAATTACAAAAATGAAAACTTGCTCCACTGAAATCACAATCTATAAAAGATGCATTCTTGCTTGAAATATCATTTAAATTAGCGTTTTTAAAACTAGCACCATTTATAAATGCATTATTAAAATCTAATTCACTTAAATTTATATTTTCCAAGTTTGCATTATTTAAAGAAATCCCTTCTAAAATACAACACTCAACTAATTCTTTTTCGCTTTTCCTATCATTTTCGATAATGATAGTTTCATCAAGTCTTTTTAAAATTCCCATTTTAACTCCTTAATTCTTTTTTTCTAAAAGCTCAACTTGTGCTTTTTGATATTTATAGTTAAAAAACATCAGAATGAAAAATAATACAAAAAGTAAAACTAAGATGATATTTAACATTTTTATAACCGGCAACTTTTATAATCAGCTTTATAGATTTTTTTTAACTTTATAATCTATCTGTAAATTAGTTTCTATTTCTTTACAAGTTATAAACCAGAAGTTTTTATCTTCTTGTGTTAATTTATAAATAATTGAATTTCCTAAAAACCCAAAATCTTTAGATACATTGCTAAGAGCTTCATCTTTGCTGAAAGCACATATTGTATCTACAAACTTCTTTAATCTCTCATCATAAAATCCTGTACGACTTTCAATCTCTTTAATTTTTTCTAGCATACATTTATAGAAGTCAAAACCTAAGTTTTTACAAAGATATTGACAATAAGATATAATTCTAGGTATAGATGTTTTTACATGCAATTTTTTAATTACTTTGCAACAAACTTCACTAATCTCATCAGTAAGGTTATATATTTCTATATTTTCATTATTACTACAAAATTCGCAGTAATAATCAAAATCTATAATATCAAAAGCGTTAAAACAAAACACTGCTATGTCACAAAGTGCTTCAACTCTTTCTAAATCATCTTTTGCTCTAAAATACTCGCTTGCTTTTTCAAAAACATTACCTAAAAAATCTTTTCTTTGATTTTCATAGGTTAAATGTCTTTCTTGTCTCCATTGTTTCAATCTTTCTTTAATTTCATTAAATTGAATTTCTGTCATCTTTTTTAATCCTTTGCTATCTTTTTAACTTCTTTTGTGGTATAAATCTCATTTAAAGCATGCAAGATATTAGCTTCTTTTAGTATTTTTATAAAGTTGATATCATCATTATCAAGTTTTGCTTTAAAAGCTAATTTTGAGTTTAAAGATCTTATGTTTTGATAACCATATCTATAAATTTGCATTAAAAAATATCTTCTTTCGATATCTTCGCATTGCAATAATTCTAATTCTATAAAATCTTGGAATATCTCGGCGTTTTCTATGTGATATTCTTTAGAGCTTGAGCCTTTTTCGGCTTTATAAAGCTCTTTTTTGTAATCATAAGCTTTTTTAAGCTTGTCAACTAATTTCATTTTTAACTCCTTAATATTTTTTTCCATTTTTCTTCGTATTTTTCATAATTTTGCCAATACTTAAGCTCTTTTTCTAATTTATTTAAAATAGCTTCAAAAACAGTATCTTTTCCTATTTTTTCGGCAACTAAACTCATTTCCCATTCTTTTATGCAAAGAATTCCATAATCCTTGGCTAGTATTTTCCTAAGCTCCAAAAGTTCTTTTTCACTAAGCTTTCTTTTAAAGCTTAACTGCTTTTTCTTTTCTAAGTCGTATTTAAGGGCTTTGATTTTGTTTTCATATTTTTCCTTTTGTTGTTTAAGCTGTGATTTATAACCTAAGCTTTGATGAAAAGCTAGTTTTTGCATTTTCTCTTGTTCAAGGTTTTTAAGGCGTTTCTCACATTCTATAAAATAACGCCTCGCTTGTCTTCCCTTTTCGTTGTTTTCAACCATACAAAGCTCTTTTGCCATATCTAATGTAACATAGTATTCTTTGCGAGGTCTGCGTCCTGTAAAAACTTCTTTAATGATATAGTCTTGATTTTCGATAAAACTATAATGACTGATCCTGCGATTAATCCAATCTGCGAATTTTGTATCAATTTCTAAAAAATAAAAAAGAAATTTAACATTAGCTGGAAAAGCACCTTGTAATTCTGTGTGTGTGAATGTTAATTGCAGTTGCATTTGCTTACCTTTATGTAATTAATCGATAAGCAAATAATTACATATTATTACTTAAATAATACTTAATGATAACAATTACTTACTTAAAAGTAATAAAATGTATTTTTCTCAAAAATGAGAAAAATAAAATTAGTTTTATTTTTCCTTTATATCATTAATAATTAGATTAATAATATATTGAGTTGTGTTAATACCTAACTCTTCAGCTTTTTTGTCTAGTGTTTCTTTGAGTTTAGCGCTCATAGTTAACATAACTCTTTGTGCTTGTTCTTTCTCTTCTGCCATTTTCTTTTTATCCTTTTCTATATCTTTTTCTTTTGCATTTGGATTGGTAATCATAATATCAGGATGATTTTTTTCAGCTTCTTCCAAAAGCCATATATAAGCTGCATTTTTGTTCATCTCTAAATTATTTTTTTTACAATATTTGTAAAATCTTTCGTAATATTTTTCTTTATTTGGATTTAAAAATTTTGTTGGATGTTCATCCATAAATTTTTTACTTATTTCAATAAAGTCTTTTTCATTCATAATTTTTCCTTTCTTTAATTTGATAATTTTATCAAAATTTTACTTAAGCAAATAGACTTCTTTCTATATGTTTAAACATAATTTCATTAGCACTTTTAAAAAAGTCTTTTTTAATCTCAAAGCCATAAGCTTTGCGGTTTAAATTTGTCGCTGCTAAAAGAGTGCTACCACTTCCAGCACATGGATCTATAACAACATCACCTGCATCTGTAAAAATAGTGATTAATCTTTCTAGTAATTTAACAGGCTTTTGTGTGGGATGTACTTTAGGAATGCCTTCATCTTTTTGCCAATCCATGCAGTTATAAATCATCTTTCCATCATTGTTAAATTTTGGAAGTTTTTCACGATATAAGATTAAAGCATATTCACAATTTCCAACTATTTTCATATTTGCTTTTAAAACTTGAGATGATCCTTGTTTTCTAAAAATCAAATTTATATAATGATTAAAGCCATATTTTTTAGCTACTTCAATTAACATTGCTTGTTGTTCAAAAGAGCAAAAAACAATCATGCAAGGACTTTTACCGCATTCTTTAGGTTCTTTTATAAGCATTTTTGAGCAAAAGTGCATAAATTCGCTAACTCTAAAATCATTATCTGTATCAAAAAACGCCTTGTTTGCTTTTTTGCTTTCTCCATTTTTATTATCCCCATTTATATACCATTCAGGAGATGAAGCATAAGCATTGTTGCCTAAATTATAAGGAATATCAGCTATTACGAGCTGTGCTTTTGGTATATTATATCTTTTAAAATTTTGAAAATGGTCGTTATATAAATTTGGTTTCATTGGCATTTTTTCTTTCTCTAATATATTTTTTAAGACTATTTATTAAAGCGTTGTAATTTCTTTGAGAAGGATTTAGAGCAAAACTGCAAATATCGTTTATTAAAATATAAAGTTTAAAATCCTTTTGAGATATTAAACTTAAATATATTACAATACCTTTATAACATTCTACAGGTCTTTCCATTGAAATAAATCTCTCGCATCTTTTTACATAAAACTCACATTTTTCTAAGTCTTGTATCTCATATCCTTTAAACTTGCTACGAATAGCATATTTTAAAGCATTACCTATGTGAAAAATAATTCTTTTTTCAGGCATAATATTAAACATTTCTTCCAAAAAGTCTAAATTTTCAAATCCAAAACCTTTATAATGCGGTGGATTATTTACTAAATCTACTCTAAATTCTTTTTCTTTCATAATTATCCTTGTTTAGCCTTTTCACACATCTTTATAAAATCATAAATATTAGTATTAAAAATAGCATTTCCGCTTTTAAATTTTAAAGGTATTTTTTTAAGTATTTTGATTTTATAAATAGTATTTGAAGTATCTATAAAAGAGCAAGTATCGCTTAACTTTAATATTAATGCATATTCGCTCATATTTGAGTAAATGTCGGCACTCGCATTTAGTGCTATAAATACAAAAAGATTATTTTTTTCATTTTTCACTCCTTAAAAATTTTTCAACATCTTCAAAAGCTTTCACAATAAGCTTTTTTTCATGAAAGTAATTTCTTCCGCTTGGCTTACTTTTGTAAATTTTGTAAGCCTTTCTGAGTTCTTTTTTACTTATATGATTTTTATAATTTATTTTCTCGATTTTTATTTCATTTTGTTTAGCAAATTCGCAAAAACAAGTTCTTCTTTCGCTAAATGGTATGATTTTTACAATTTCAAGATAATTAGAACGGGAAACTTCCATCATCATCTCCTATTTCGATATATTTTTCATTGTTATTTTTTTTACTTCATTTCCATAAGGATTATAGCTTTGATTTTCTTTTGGAATAAATGATTTATTATTGTCGTTGTTTAACGATTTATGTCTTGCTTTAAAAGATTTTATAGATAAAGGTTCTTTGTTATTTTGGAACTCATCCATGCTTTGCATCTTTTCATTAAAAATTCTATCAAGAAAAATTTTGTTAGCAATTTCTCCATTTTTACTTAAATATTCTTCTGTCCCAAAACCTAAAACTAAAAGTTTATTAACTAAAGAATTTAGATAAATAACTTCAGTCTGCACTCCAAAAACATTCTCATTTCCCTTTTCACTAAAATCAAGTTCATCAATTCCAAAGAATTTCATAATAGCGTTTAATTGTCTAAATCCTAAATAATTTTCTTTTTCACCATTTTTATTGATATAGCTAAAATCGTTATTTTTAGCTACAAAAAGATTAAAAATAGCTAGTTTTTGCTCTTTTCTAGTTAAAAATTCAAAACAAATAAAAGTATTATTGCTTCCATCACTTGCCAATTTATCATATAAAAAGGCTTTGCGGAAAACTCCGCTATAAAGCCCACCTTCACTTAAATACTCTACGCTTGGCGAATAATTTGCCACTTCAAAACTTGCCTTAAATGCTGGTAACATTACAATTCTCCTTTAATTGTTTTTATTGCTTTTTCTTTGTTTGCTAAAACATTTTGAAATTTTTCTATTGTAAAAATATTATATTTAAGAATAAATTCTTCGCTTTCTTTTTTGCTGATACCATTTTCTTTAATAAAGGCATCATACTGATCTTTTATCTCTTTTAATTCTTTAATAGAATTATTAATTTGTTCTTTTTTATCATCTATTGCTTTTAAGTTTGAATTTGAAAAATTATAATTTTCATTGTCGATATTGATAACTCCATCTAGAACATCGCTTTTTATAAAATAGCCAATGTGTTTAATCGCCCTTCTAATAGCCGATTTTCTTGCCATTTCTTCAGGAAATTCTTTATAAACTCCACCGCCTTTTGTGAAGGTTTTGCTTTTTATGATATCTAGTTGCTCTTTTGTTAAAAACTCCGCTTTTCTATAAAGCAAATTACCGTTTTTAACTATAGAAATTAAAGCGTATGCACCTTTTATCGAATTGTCTAAAGGATTTTTACTAATGCTTAGATTGTCGATTTCATTTTCTGTTATGATTTTTACTTCATCGCTATTTGCAATCGTATCACTCTTAACAATAATTTCAAATCCTCGTTTTAAAGCCTCATTTATGGCAACTTTGACAAGTCCCATATAGCTAGGCTCTATATTTACATTATTGCCCATAGGCACTATATAATAATCATTGTTTAAAATACTAAGCCCTGCCTCGCTAAGATTTTTGACCTTTAAAAAAGATGCGGTTTTATTGTCTCTTAAAATTTGCATCACCTTATTATTTTCGCCTGAAAATTTTTCGTTTATTAACCTTAATTCATTTTCGAATTTTTCACTGATAACAATATGATTATTTTCTTTAAATTCTTTTACTTGAGTTTCTTTTTCTTCTACTATAGCCACTTCCATATTTTCATTACTCATTTTATGCTCCTTTTTTGATTTTTAAACACATTGAAATACTTTCTTTATAAAACTCTTTAGGCACAGTAATATTTTTTTGCTCTAAAAAGCCCTTATAATCAATTGTAGTTCTACTTTGCGGATAAATTGTAATATCCAAACATCTTGCTTTTTCTCCATTTGCTAAGGCTATGAGTTCTTTTTTAAGACTTTCTAGCTTTTCTTTAATAGGTTTAATCGTGTTTTCAAGCCTTATAATTTCAATCGTTAGATTTTTTGCTTTAGTATCTTCAAGCTCTTTATATTCACTTTTTTGATCCATGATATAATCTAATATAAATTGCTTTATATTTTTAACCAACCATTCTTGATAAGCTTCATCTTTTGAAACTTCGCACTCTACAATCTCTTCTTCTTTATTCATGGCTACAAAAATGCATTTTTCTTTACCACTGATATAGAGTTGAAATTGCACTTGAGCGTAGTATTTATCACTTGGCTTTTTATTTCTTTTGATAAAATCATACTCATCTTGCGAATATTTAAACTCATAAATAACGCCGTTTTCATCCATTCCATCTAAACTTGCTATAAACATTTCATTTTCTAGACTTTGCAAAACTACAGGAGTGATACTCACGGAATGTAAAAACTCAACTCTAGCTCTAATCAAAGCTTCATAGTTATTGCCTTTTTTCATAGCTTCATTTTGATAAACTTCTTTAAGTCCTAAGATAATATCCCTTGCTTCTTCTTTAGAATTAAAAGCACCTTTGATACCTACGCAAGATGCTACCATCGATGCACCTATTTTTCCTTTTCTAAAATTTAACCATTCATGGCTACCTTGTTCTAAGTCAATTATTCTGCAATTCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP008787|451169:461971|454731_454902_-|WP_002864902.1|DBSCAN-SWA
MVKKYFREKELSEYLGVSITSLFKLRQDGKIPYIRIGKSIRYEIKEIEKWLKAKRH
>NZ_CP008787|451169:461971|456231_456582_-|WP_002875041.1|DBSCAN-SWA
MKLVDKLKKAYDYKKELYKAEKGSSSKEYHIENAEIFQDFIELELLQCEDIERRYFLMQIYRYGYQNIRSLNSKLAFKAKLDNDDINFIKILKEANILHALNEIYTTKEVKKIAKD
>NZ_CP008787|451169:461971|453532_454735_+|WP_038402048.1|integrase|DBSCAN-SWA
MLTQKDIDNLEIKDKRYMISVGEPKELYVRVNPTGKKVFYLRASKFKNFITIGECQKGVLNVTNAREKAKDLLKSMYDGKFIGKNDKVMTLEKANFLYVDIKSKKLNSATIKKEQSIFKKYIIPTLGQKDINELKKDDFLPIYDLMQKKGIYETINKNISLLCRIFEISRQRGDLKTDIILQLKDLKKFYNEANHNKVKHFKAIVEEQEIRNMLECMKEYKNHPRTNTTIINAIYFTLLTAQRSKNIRFAKWSDIDFENNLWIIKADEMKVRSNGDNIIPLNKYALKILDMQRILNGDKKYIFANNNGTISENFAVRFFKFYNLEHTIHGYRSTFRSVYTNKSNELIQQGISKDIAEMILHHISGNEIERAYNRAKAIDLRVKLMQWYGNYLNSLCEFCF
>NZ_CP008787|451169:461971|457827_458580_-|WP_038402052.1|DBSCAN-SWA
MKPNLYNDHFQNFKRYNIPKAQLVIADIPYNLGNNAYASSPEWYINGDNKNGESKKANKAFFDTDNDFRVSEFMHFCSKMLIKEPKECGKSPCMIVFCSFEQQAMLIEVAKKYGFNHYINLIFRKQGSSQVLKANMKIVGNCEYALILYREKLPKFNNDGKMIYNCMDWQKDEGIPKVHPTQKPVKLLERLITIFTDAGDVVIDPCAGSGSTLLAATNLNRKAYGFEIKKDFFKSANEIMFKHIERSLFA
>NZ_CP008787|451169:461971|457388_457784_-|WP_032582844.1|DBSCAN-SWA
MNEKDFIEISKKFMDEHPTKFLNPNKEKYYERFYKYCKKNNLEMNKNAAYIWLLEEAEKNHPDIMITNPNAKEKDIEKDKKKMAEEKEQAQRVMLTMSAKLKETLDKKAEELGINTTQYIINLIINDIKEK
>NZ_CP008787|451169:461971|460182_461115_-|WP_038402058.1|DBSCAN-SWA
MSNENMEVAIVEEKETQVKEFKENNHIVISEKFENELRLINEKFSGENNKVMQILRDNKTASFLKVKNLSEAGLSILNNDYYIVPMGNNVNIEPSYMGLVKVAINEALKRGFEIIVKSDTIANSDEVKIITENEIDNLSISKNPLDNSIKGAYALISIVKNGNLLYRKAEFLTKEQLDIIKSKTFTKGGGVYKEFPEEMARKSAIRRAIKHIGYFIKSDVLDGVINIDNENYNFSNSNLKAIDDKKEQINNSIKELKEIKDQYDAFIKENGISKKESEEFILKYNIFTIEKFQNVLANKEKAIKTIKGEL
>NZ_CP008787|451169:461971|451169_453245_+|WP_014516949.1|DBSCAN-SWA
MSRSTPLKKVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERGITITSAATTCFWKDHQINLIDTPGHVDFTIEVERSMRVLDGAVAVFCSVGGVQPQSETVWRQANKYGVPRIVFVNKMDRIGANFYNVEDQIRNRLKANPVPLQIPIGAEDNFKGVIDLVTMKALVWEDDTKPTDYVEKEIPAELKEKAEEYRTKMIEAVSETSDELMEKYLGGEELSLEEIKTGIKAGCLSLSIVPMLCGTAFKNKGVQPLLDAVVAYLPAPDEVANIKGEYEDGAEVSVKSTDDGEFAGLAFKIMTDPFVGQLTFVRVYRGCLESGSYAYNSTKDKKERIGRLLKMHSNKREEIKVLYAGEIGAVVGLKDTLTGDTLASEKDKVILERMDFPDPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEVGQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQEALQNGVLAGYPVEDVKVTVYDGSYHEVDSSEMAFKLAASMGFKEGARKAGAVILEPMMKVEVETPEDYMGDVIGDLNKRRGQVNSMDERGGNKIITAFCPLAEMFGYSTDLRSQTQGRATYSMEFDHYDEVPKNVADEIIKKRNG
>NZ_CP008787|451169:461971|455584_456226_-|WP_144242044.1|DBSCAN-SWA
MTEIQFNEIKERLKQWRQERHLTYENQRKDFLGNVFEKASEYFRAKDDLERVEALCDIAVFCFNAFDIIDFDYYCEFCSNNENIEIYNLTDEISEVCCKVIKKLHVKTSIPRIISYCQYLCKNLGFDFYKCMLEKIKEIESRTGFYDERLKKFVDTICAFSKDEALSNVSKDFGFLGNSIIYKLTQEDKNFWFITCKEIETNLQIDYKVKKNL
>NZ_CP008787|451169:461971|459003_459255_-|WP_038402055.1|DBSCAN-SWA
MKNEKNNLFVFIALNASADIYSNMSEYALILKLSDTCSFIDTSNTIYKIKILKKIPLKFKSGNAIFNTNIYDFIKMCEKAKQG
>NZ_CP008787|451169:461971|458560_459001_-|WP_038402054.1|DBSCAN-SWA
MKEKEFRVDLVNNPPHYKGFGFENLDFLEEMFNIMPEKRIIFHIGNALKYAIRSKFKGYEIQDLEKCEFYVKRCERFISMERPVECYKGIVIYLSLISQKDFKLYILINDICSFALNPSQRNYNALINSLKKYIRERKNANETKFI
>NZ_CP008787|451169:461971|459244_459508_-|WP_038402057.1|DBSCAN-SWA
MEVSRSNYLEIVKIIPFSERRTCFCEFAKQNEIKIEKINYKNHISKKELRKAYKIYKSKPSGRNYFHEKKLIVKAFEDVEKFLRSEK
>NZ_CP008787|451169:461971|456584_457253_-|WP_038402051.1|DBSCAN-SWA
MQLQLTFTHTELQGAFPANVKFLFYFLEIDTKFADWINRRISHYSFIENQDYIIKEVFTGRRPRKEYYVTLDMAKELCMVENNEKGRQARRYFIECEKRLKNLEQEKMQKLAFHQSLGYKSQLKQQKEKYENKIKALKYDLEKKKQLSFKRKLSEKELLELRKILAKDYGILCIKEWEMSLVAEKIGKDTVFEAILNKLEKELKYWQNYEKYEEKWKKILRS
>NZ_CP008787|451169:461971|454894_455437_-|WP_038402049.1|DBSCAN-SWA
MGILKRLDETIIIENDRKSEKELVECCILEGISLNNANLENINLSELDFNNAFINGASFKNANLNDISSKNASFIDCDFSGASFHFCNFLRTEFENCIFENVDLRDCIGDMKNIFSVVLDTYVMTFTKTMMNLGCDTKTIKEWRNLSVDDLEDEEQKWLWNYYKDTIFEIIDKRLGVENG
>NZ_CP008787|451169:461971|461116_461971_-|WP_038402060.1|DBSCAN-SWA
MNCRIIDLEQGSHEWLNFRKGKIGASMVASCVGIKGAFNSKEEARDIILGLKEVYQNEAMKKGNNYEALIRARVEFLHSVSITPVVLQSLENEMFIASLDGMDENGVIYEFKYSQDEYDFIKRNKKPSDKYYAQVQFQLYISGKEKCIFVAMNKEEEIVECEVSKDEAYQEWLVKNIKQFILDYIMDQKSEYKELEDTKAKNLTIEIIRLENTIKPIKEKLESLKKELIALANGEKARCLDITIYPQSRTTIDYKGFLEQKNITVPKEFYKESISMCLKIKKGA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
444986:445000	attL	NA	NA	NA	NA
WP_014516949.1|451169_453245_+	elongation factor G	E4ZFJ7	Streptococcus_phage	6.7e-65	26.9
WP_038402048.1|453532_454735_+|integrase	site-specific integrase	X2KXI6	Campylobacter_phage	1.5e-32	30.5
WP_002864902.1|454731_454902_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_038402049.1|454894_455437_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
455370:455384	attR	NA	NA	NA	NA
WP_144242044.1|455584_456226_-	hypothetical protein	A0A1D8EXE5	Campylobacter_phage	3.6e-78	72.9
WP_002875041.1|456231_456582_-	hypothetical protein	NA	NA	NA	NA
WP_038402051.1|456584_457253_-	antA/AntB antirepressor family protein	A0A0M3LQ72	Mannheimia_phage	7.2e-21	49.1
WP_032582844.1|457388_457784_-	hypothetical protein	NA	NA	NA	NA
WP_038402052.1|457827_458580_-	site-specific DNA-methyltransferase	X2KR14	Campylobacter_phage	3.8e-143	98.4
WP_038402054.1|458560_459001_-	DUF3310 domain-containing protein	A0A2H4J2X1	uncultured_Caudovirales_phage	8.1e-05	35.8
WP_038402055.1|459003_459255_-	hypothetical protein	NA	NA	NA	NA
WP_038402057.1|459244_459508_-	hypothetical protein	NA	NA	NA	NA
WP_038402058.1|460182_461115_-	recombinase RecT	Q708Q2	Streptococcus_phage	6.4e-07	29.9
WP_038402060.1|461116_461971_-	YqaJ viral recombinase family protein	A0A0K0MD53	Pseudoalteromonas_phage	1.7e-06	24.3

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP008787|475881:488374|DBSCAN-SWA
AATGAATATAAGAGAATTTTTATTAGAAAAACCACAAGAAAATAACATTATTTCATTTTTGCAAGATGGAACAAGTCAAAGTGAAAATCAAAATACAAGTGAATATTTATCAAATTTAAAAAATGAAGTAATAAATGATTTTTATAAAAATAAAGATAAATATGATAAAGAATATGAAAAATATAATTTCAAAGACCAAAATTTAACAAATCCTATGGGCAATATTAGTGAATATAAAAGGGATTTATATGATTATAATAAAAATCCATCCATGAATGCTGATGATTTAAGTAATTATATTTTAGATAAGCAATCTAAATTTAATGCCTCTAAACCTATTTTTGCTGATGATAATGAAGTAGCAAGAAAAAGTAATCAGTTTATGAGAGATTTAGGCGATGAGTTGCAAAAATCAGGGCGTGGAAGATTATTGCAAGATGATGATGGATCTTATTGGGTGCAAGATAATAACGGAAATTATTCTAAAGTGCAAGGTAGCACAATGGGTGATTTATATCGTGGATTAAGAGATAATGGTGCTAGTATGGCTTTAGGAACAGCAGGTGCAATTGGCGGCACAATGCTAGGTGGCGGAGTTGGTATGGTTGCAGGTGGTGCATTAGGTGCATCTTTAGGGGCAGGATATGATTACTACGGAAATACAAAAGATACAAATCAAGATATGAATTTAAAAGAAGCTCTTATGCTTATGGGCGAAAATGCAGGATTTTCTTTAATAGGAGATGCAGCTTTTGCAGGAGTTGCCAAAGGAGCAAGAGCTTTAAAAAATACCTATAATATGGCAAAAACAGGAGCACAAGCCGGTAAAGATATGATAGATGGCATGGCTGTAAAAGGTGGTAATTTAAAAGAAAATATAGGGGATAAGCTTAGAAAAATAAGCCCTAGTATTTTAAATGATTTAGCTTCACAAGGTAGCGAAACTTCAAAAGCTTATGCAAGAGAGCTAATAGAAAGCGGAAATAGAAATTATGATGATATATTGCAAAAATCAAGAGCTATGCCTTTAGAAGTTAATCAAGGAAATGCATTAGTTGATGGAGTGGCAAGCAAAATAAAAGATTTCTCAAATACTGCAAAAAATGGTTTTGTAAAAAATACAGCAGACAACGTAACTAATTCACTAAATAATATTAGTAAAAATATAGGTTCAAAAGAAGCAGCACTGAATCAACAAGATCTTATTAATCTTTCTTTTATGAATGATGATTTAGCTAATATGGCAAGAAGTGTTTTAGCAAATGACCCTAAAATGGCAAATAAGGTTGCAAACTCTTTACACTTACAAGATGAGGCTATATTAAAAGAGTTAAATTTAAATAATGCTTCTAAGGCTGATGAGCTTTATGCTTTAAGAGATGCTAGAGCAAAAAGAGCTTATGATGAATTTGGAAAAGGACTTGATAAACTAGATGAACTTAATCCAAATGGTGTAAAAGTAGATAAGCAAACCATAGATGATATAGTTTTAAACTCAAGTGTTTATAGTGAAAGCACACCAGCTATGATAAAAAATTTTATTCATGAAGCAAAAAGCGGTGCATTAGATGGTAAAAGCGTTAAAGAGATTTACGATAGAATTGATGCTATAGGCAATAAAATAAAAGAAAGCTCAAGTTACAACTATAAAGATTTTTTAAATAGCTTAAAAGACGCATTTTTAGAAAATATAGTAAAAAGTGCTGATAATCCCCAAGAAGCAAAAGAGATTTTAACCAAGATTAGAAAAGATTATGCAGATTTTAAAGTATATGATAAAAGTAAATTAGGAAAAAAACTAGAAGGAAGTGAAAAAGAGATATCAAAAGATATAGATAAAATACTTAATGAAACTAATCCAAAAAAGAATTATGAAGCTATAACAAAAGGACTTAATGATGATGAGATTAAAGTTTTAGATAATCAAATAATAACTAGAGCTTTAGAAAAAAATAAAGTAAATATAGGAGATGCCAATAATCCCAAATTTGCAGTAAATTATAAAGCGGTCATGGATAATTTTGAAAACTTTAAACCAAAAAGCAAATCAGGACAAGAGAAGATTGAAGTTTTAAAAACAATAGGTGATTTACGTACTAACTTTGAAACTGTAATAGATGGTATTTTAAATTCAAAAGCAAAAGAACTAGGACATGGAATAAGTACAAATTTCATAGAAAGAGCTAAAACAATGCTTGTTAATAATTTCACTGATTATATAGCTTTTTATTTTATGAGATTATGGGAAGTTGGCAAAAGAGCTGGAACAAGAATACAAATGCGAAGGGGGTTTAGCAATATAAATAATTTAAAAGATTTTGATAGATCGGCTAAAGAATTTATAGAAAGTATTAAAGATAAAACACTCAAAGAAGAAGCACAAGAGGCTAGAAAAGAATTTAATTCAAAAGTTAAAGATTTAATCAAAGGCGACAACTTCTTCATGGATAAAGCTGATCCTAAAGACAATTCTTTAAGATTTATAGGCAAAAATGGCAAAGAGTATACTATAAATAAAGATGTTAGAAATGAATGGATGAAAACTTTCAATCTTAAAAATATCGATGATGAATATATCCCTAATATACCAAAAGAAGCAAAGATAGCTTTAAAAGATAGAGAAATAAAACTTACAAAAGGAAGTTTACTAAAGCTGATTGAAAAAGATAGAATTAAATACATACCACATATCAAAGAAACTTTAGAAAGCCCACAGGCAATCTTAAAAGATAAAGATGATTTTATTTTTATTAAAAATATAGATAATCAAACTTATTTTACAAGTATAGGTAAAGACTATGAAACGCACTTGACTATAATTAGCAATTCACCAAAGAAACAAAATAATATAAAAAATAAAATGAAAAATGCTGAAGTAGTGTATTATAATAATGCGAGAGCCTTACCGACATCTAGGGCATCTTCAGAGACAAAGCAAGTGTCGTTCTCTAACGAAAATTCTACCCAAGCTAAGCCTAAAAAAAACTTAATGGATGATATAAAAGATAATATTAAGAATAAAGAAATAGAGAAAAAGAATAAAAAAAGCGTAAAACAAAGACTTGATGAAAAAATACAAAATGATAAAAAGGCTAGTGAAGATATTCTAAAAAGATATGATAATTTTCTAAAAGAGAATAAAGATTATAATTTTGATTTTTTAGATAATATGAATTTAAATACTGTTGAATACAACTTAACTAGACAGATGATAATCAATGCCAAAGAAAGCACAAATAAAGGTGTAAAAAAAGATATTCCAAGTGCTTTAAGGGGTAAAATCGAACAAGAATTAAACATACAACCTTTAAAAGAATTTGGCGAAAATTATGCAGAATATTATCACGATGGAGCAAGGGCTATAAAAAAACTACTCATTGAAAAACAAGGACAGGTAGCAGGTGCTTTTCATAGAAAAGATTTAGGGGATATTGATTTGGTTTGGGGAGATGGAAACTTTGGATTAAGTCATATTGTCAATCGAAGAGAAGAAGATTTCATTAAACAAGGGTTAAATAAAATAGAAGCAAAAAATAAAGCTTTAAATTTTATAAAAGAAATAGAAAATATTATAAATAATGGAAATGTAAAAAAAGGTAATAATAGAGCTTTTATTGATGTTAAGAATAGTAGAGTTATGGTAGCACTTGATTATAAAGGTAAAGATAAAAAGTGGATTATAACTGCATATAATTTTTATTAATATATCGCCCCTAGCTTAGCCGATACGCACTAAAGCTAGGCTTAATACTGACACTTTAAGCGTGAGTAGTGTCAATGGCGATTATCAATTATAGCATAAATTCATGTAATTATTTTTTAAAATATAAAAGATAATTGAAAAGGAGATAAGACAAATACATGGATAGTTGCAAACTATGAATTACAATAAGAGAAGTGAAAGTTTATATACATCTTTCGCAATTGTAAAGGGCGAGATTCTGCCCTTAAGCTCTTAATCAAAATTCTAATAAACAAAACTAAAAACAAAAATAAATTAGTTTTAATTTGTCTTGTTTTTAAAAATATCTAATTTATTTCAAAACACACTATATTTGAAATAGTCATTTTTGGAAAAATCCTTAAAACTAAACTAAGGAGAATTCAAAAATGGCTTTACCTTCAATGGGACATACCTCACCCGCAACGGAAAATGTTAAATTAAAACAATCAATATACGAAACGATTATTAAAATCGGAGCTACTGAAACACCAATTTTAAATAAAATAGGTACTTCAAAGGTTACAAATCCTTTAACTCATAGTTGGATTACTGATACTTTTGAAGAACCAAAAAAGAATGCAAATTTAGAGTTAAGTAAATTTGTAGGTGAAACAAAAAACACAGCTCAAAAAACTACAAATGCTACTCAAATATTCATTACCGAAGCCATGGTATCAAAAGCTTTATTAAAAGCAAATCAATATGGTGGTAATGAAATGGAGCATCAAATAGGCAAAAAAACCAAAGAACATAAAATGGATATGGAATATGCTTTATTTGGTCTAGGCAGAGATAGTGATGTAAAAAAATCAGTTTTCAAAGATTATGTTCAAGCACAAGAAGCAACAAGTGGAGAAATGGCTGGACTTTTTCATTATATCGCTAAAGGAAAAGATAGCTTTGCTGATGGAAAGCGTGGAAATGTATTAGCTTTTGATGAAACAGGAGATTGGAGCGGAACTGCAACAGAACTAACAGAAGATAAACTTAATCAAATTTTGCAAACCATTTGGAATAGCGGAGTTACGCCTAAAGATGTCTTTTTAGGAGCTGACTTAAAAGGAGCTATTAACAAATTTGCTACAAGAATTTTAGGCAATGAAACAAAACTAGCAGGACAAGTAGTAAGCCTTGAAACAGATTTTGGAACGGTAAATTTCCATATGCATAGATTATTAAGCCCTAAATATGGTTTGGGTGATGTTTTAATTGCTGGAGATTTTGAGTATATGAAACATGGGCTTTATATTCCTACTATGATTGAAGATGTTCCAACTGATATTACTGCAAAAGCAAAAAGATTTTATACGCAAAGCACTTTAGAAGTAAGAAATGCTGATGCTTTTGCTATAGGAGTGGGATTAACTAGTGGAAATAATGCAAAGGCTAAAGCGGTTTTAAAAGCAGCAAAAGGTGCATAATGCTTTGTGCTACGGCTAAAAAACTCATTATCGCTAAAGTTAAAAATTCTTACAAAATGATAGAAGATGATGAAGTTTTGAAAGCCTATTTTATGGAAGCATTTTATTATATTTTATCAAAATGTGTTCCTAGCGTTCTTTTAAAAAATGTAGAGCAAGGCGAAAAAGTTTTTAGGCAAGTTAGGAATAATCATTTTTTGATTATTCCTGATGAGCCTGATTTTGACAATGAAAAAGAACATTTAATGATAGATGAAACACTTAGTTTTGCTGTGATTAATTATGTTTGTTATTTGATTACAAGATGCGAAGAAAAAGACTTTCTGGCATTATGTGACAAGATAATTTATGAGTATATAGCTAATGATGGCAAGGAGCTTGATGATGAAAGAACATGGTTGTAATTGTAATTTCACAAAAAAATTTAATAGAGCTTTGAGTTATAAAGACTATGTGCAAAGTATAAATAGTGCTGATTTTATAGCTTATTTAGATGATAAAAAATGGCTTTTAGCCATGGATGATCTGCTTTTCTTTTGTGAAAAGAGAATTAAAGATAGTGATTATTATGAAGGTTAAAAATGGGAACAAGCTTAAATGAATTAAAAACAGGTAGAGAAAAACTTGAAATCATAAATCAAGTTTTAGCTAGAATAAACAGCATTTCAGAAGCAATAGACAATACAAGACTTGATGAAGTTGTAGGCTTAAAACAAGCTTGCGAATCTTTAAAAAATGAATGTTTAAAATTTAAAAATGATATTGTAGATAAAAATGATGATATTTTAAGCAAATATGATGATATTAATAAAAAATATTCAAATATAAGTGAAAAATACAACAATGTAAATGCAAAATTTGATTATATTAAAGAAGCGTATGAAGATTTTTCTTTAAATAAACAAGAAATACAAAACATTAAAGATTTTTTAGAAAATAATACAGAAGAATTTGAGAATTTAAAAAAAGATATACAGAAATATGAAGAAATAAAATTTAATTTAGATAATTATATTAATGAAATTAAACAAAATAAAGATTTTGTAAAAGAATATTTTGATTTGAACACAAAAATTAAAGATGAAATTTTAAGTGAACTTAATCATGCTTTAGAAATTGTAGATAGCTTACATTTAAATGTTGATGAATTAAAAGAAATAAAACCTGAATTAATAAGTATTAAAAAAGAAGTAAAAGATTTAGCAAATGAAGCAAAATTAGTAGTAAGTGAAGCAAGCGAAATTATAAAAAATAAAATTAACACTATATTCTTTGAAAACCAAAGATTAAATCAAGAAATGATAGATAGTGTTAAAAAGCTAGAAGAAATTAAATTTGATATTGGAGTTAAATATAAAGAAATAGCTAGTGCATATGAACTACTTTTAGAAAGCAAGCAAAATATAGAAGATTTAAGAGAAGTTATAGCTTTATATAAAGAATTTGAAAATGATATAACATCTTATTCCCAAATTATAAAAGATTTTAAAAGTAAAATAGAAAATTTAGAACGAGATTTAAAATCACAGTCTGAAAGTATCTACTCTTCTTTAAATGATAAACAAAATGAAATATTAAAAAAATTAAATGAAGTAAAAAATGAAGCTTTAGTTAAATTTGATGAACTTACAGCAAAATGTGAAGGGTATAAAATACATTTTGAGCAAAGTTATGATAGGTTTAATCAAAGAGCTTTGATAGCTAATGAAGATTTGGGTAGGTTAGCTGAAGTTGCTAAAAAAGAACTAGGTAATGATAAGTTAATTTATGAAACAGAATTAAAAGTTTTAGCTGAAGAAACAATAAAACAAATGGAAGAAATGCTCAAAGGTTTAAGTGATGAAAGAAATGAAGTCACAGAGGTTTTTGAAACTCAAAAGAAAGAATTTACTACTCTTGTAGATACTTCTAAAGTTATGATTGACAACTTAAATCATATTTTTAATGCGAATTATCAAGCAAAGAAAAATGAGTTTAGTATTATTTTTAATGAAAAATTGCATAGTTTAAACGAGAATAAGCAAGATTTTTTAAATGAGCTTGTGAGCGCAAAAGAAAACGGACTCAATAAAATAAATGAAACAAAAGAGCAAAGCCTTAATGAAATAATCCAAACAAAAGAACAAGGACTTAATGAGCTTGAAACTAAAAAAGGTGAGTGCATAGATGAGATTGACAATCAAGCAAGAATCTATGATATAAGTGGTGTTAAGGCTAATGTTGAATATCTTCTTTCTTTGCTTAATGAGAAAGATGATGGTAAAGATGATGGAATTAAAGATGAAATTGCAAATATAGAGCAAGGTATAAAAGATAAAGAACAAGAGCTTGAAGAGATAAAAAAGCAAATTGAAGAAGCTTTAAACAATAATGATGAATTAAAGCAAAAAAATGAGGAATTAAAGGAAATTAAAAATCAAATCGATGAGGCTTTAAGTCAAGAACCACCTGCTGATACAAGCGAACTTGAAGAGAGAAAAGAAGAACTTGAAAATCAAATTGCTGAGCTTGAAAAAGAGATTGCTGGTGAATTAATTAACAAAAAAGAGGAAATTGAAAAAGAACTTGAAGAAGCTAATCAAAACTTAGAGGACAAAAACAATGAGTTAGAGCAAAATGAAAAAGATAAAAAGCTAATTACACAAAAAGTATTAGATATAACTATTAAAACTTTAGAAGCACTTATAGATACAAAAGTAAGTTTAAATGGCGATGAAGAGATAAATGGAAATAAAACTTTTGCTAATCCTATTTTAGTAAAAGTAGATCCAACTAATGATAACCATTTAACAAATAAAATCTATGTAGATACCGCTTTAAATACAAAAGCAAATTTAAATGGAGATAATATATTTAATGGCACAAATATTTTTAATAAGGCATTAACTTCTCCAATCGATCCAACAAATGATAATCACTTAACTAGAAAATGGTATGTAGATTATGGTGGTGGAATTAAAAATCTTGGCACAACTGGCAGTATAAATCTAGATTTAAGACAAGCTCAACATTTTATTTTAACAGCAAATGCAGGGACAAGAATAGGCATAAGTAATTGGGGTGGTGCTGGAAAAAGTGGGACTATAACCATAAACAATTGTCAAAATGTCGCAGGGTTTAATGCACCTTTTAATTTCAGAATAGCCCAAAGTGGTTTTAGCGGCACTGAAACCTTTGCTTATTTTTGCGTAAGTGCATCGCACATAAGAATAGCGAGGACTTAAGATGACTAGTGCTTTATTGACAGGGAGTTTTAATAAAATCAGCATAGGTGGAAAAGATGAATTTTTTGCTAATAAAGATTTGAGTATTCCGCCACTTAATGTAAATAAAACTTTAAATTCTAGTAAAAGATATTATTTAATCATAGAATGCGAATTTGTTAGAAGTTTTAGCTACAAATCTGCCACTCAAGGAAGAGGAATTTTTATAAATCATAGTCATTTTAAAACAATAGTTGCACAAAATAGCGGTGGTTTGGGTCAGAAATTTAGGTGGGAAGGATGGGTTCAAGGAAGTATGATAAAACAAGTTAATTTAGATAGAAACTGGAATTATAACCCCACTTCACAATCGCACACAAGAACAACTAAATTTGAACTTTATTGGAATTAAAAAAGAAAGGAATAAAATGTTTTACAATATCAAAAATAAAAGTTTAAAATACGATGATATTTTTTTAAAAGATGTAAAAATACAAAACGAAGAAGGTGAAATTGATGCACAAGATACTTATTTTTTAAGTGCTTGCGATGATAAGCTTTTAAAAGAGCTTGGTTTTGCTAAAGTTAAAGAAGAAGAAATTCCAAGTTTTAATGAAAAAATTGAAGAACTTCGCCAAATTCAAACTTATGATGAAGAAAATAATCTTTATATTATTTCTTATGAGATTAAAGAAAAAGCATTAGAAGAGTTAAAAGAATTAAAATTAGAAGAACTAAAAGCTATAAAAGAAGAAAAGCTTTTGTTTATGCCTTTTAAAAATACTATATTTCAAATTGACACGGAAGCAAAAATTAATATTAGCGGAAAAGTTAGCGAGATAATGTTAGCAAATCTCAATAATACTCCTTTGGAAAATATTGCTTGGATTGATAAAGATAATAAAATCATTACATTTAACAAAGAAGAATTTTTAGAATTTGGGGTTGGTATCGCTAAATATACTGAAAGTATTATTTTTAAAAATGATGAACTAAGAAATAAAGTGAAAAATGCCACATCTTTAGAAGAATTAAATTTAATTGCATGGGAGAGTGAAAAATGAGTACTGAAAATATAATAAAAGAAGGTGCTATACTCGGTTCTTTAAGTGGATCTGCATTATTAGGATTGATGGTTTTTGTCTTAGCTGGGATTGCATGGCATTTATATAAAACTTTACATAAAGAAGCTGGGGAAAGAACAAAAGAACTTATAAGTGAAACCAAAAATACTAATGTTCTTATTAGAGAACAAATTGCAGTATCCAGAGCAAGTAGCGATAGTTTGGTTAAATTTATAGAAACACATTGCTCAAAAACCAATGACAAGCTAGAAGCTATAGAAACAGATCTTATGAGAATGGATGAAAGGCTTGTTAAGCTTACTCAAATAAGAAATGATGAATTAAGAAGTATTTTTAAAAAAAAGGAAAACAATGACTAAAACAGAATTAAAAAGGGTTTGTGTAAAGCCATACGATAAGGACAGGTTTGAAGTGATACAAGATTATGAGTTTATTTTACCAAATTACAAAGGCATTGTACCACAAGGTTTTAAAACTGATGGAGCGAGTATTCCACGTATTTTTTGGAGTATTTATCCACCTTTTAAAAGTGAGTATTTTAGCGCTTGTGTTGTCCATGACTATTTGTGTATAAATGCAAAATCAAGAGATGATTATAGGCTAGCTGATCTTGTTTTAAAAGAAGCAATGCAAGCTTTAGAAATAAATAAATTTAAGATTTTTGTTTTTTATTGCTCTTGTAATTTATTTCATCAGATCAAATGTTTAATAAAGGGGATAAGATGAGTTTAGAACAGGTTATAAATACTCAAAATGAAAGTTTAAATCAAATTATAAGTAGTTTACAAGAATTAGTTTTAAGTTATAAAAATGGTAATTTGAGTTTAGAAGATGTTAAAAAATTAATTAACGAAACTATTGAAAATATATCAAATGATTATATAAAAGAAAGCGAGCTAAAAGAAAAACTAGAAGCTTTACTAGAAGAGCTTGACATCAATGCAAATATCAATGAAGAGAGTTTAAAAGAAGTTGTATTAAAGTTGTTTTAGAAAATCAAGAAAGTTTAAAAGGTGATAAAGGAGATCCTTTTACTTATGAAGATTTTACAGAAGAACAGCTTAAAAATTTAAAAGGGCAAGATGGAGCTAAAGGAGCTGATGGTAAAAGTGCTTATGAACTTTGGCTTGAAAATGAAGAAAACACGGGAAAAAGTCAAGATGAATTTTTAGAAAGTTTAAAGGCTCAAACACCAACAAAAGAAGAAATTAAACCTATTATAGAAGAGATGCTTGAAGATATGAAATTAAATTTAGGCATTAATGGAATAAAAGTATCTAATTCTATTCCCACTCCAAAAACAAAAGCTAATGTTAATGATTTAATTATAACTTATAATGAAAATGTAAAACAACTTTGGCTTTGTGTGGCAAGTGATGATAAATACACAAGTTGGATTAATTTGCTTGGAAATGAAAATATTACAGCACAAGAGTTGATTATTATTAGTTTTGATACAAATTTAAATAGTGGTCAATATGGCGGATGTTTAAGTGATTTGCGTTTTGGTTTTGAAAATTCTTTAGCAAGCACTACGCAAATTATAAAAGGACTTAATGAAGGCAGTTTTTTAATCACTAAAGATGGAATGGGTTTAAAATCTAAAAATTATACTGAAGTTAGCGTTCTTTCAAAACCAAGTAAAAATCAAATAGAAGGAAATATCAAAACGAGCGGAATTTATAATGATCCTGCTTGGCATAATATTACCAATGCTTTAAAAAAATATGATGGCAATGCAAATGAATGCTGTCTTTGGGCTTCTAATATAAAAAATAGTGTAAGTATAGAGCTTTTTACAAATGAAATTCCTATGAGTCTTTTTTATAGGCAAGCTGGATATTATGGAAATGTCAATCTTTCAAATATAAAAATGCAAAAAGCCCTTAGAGTTCAAAATGAAATTATAGTCGAGAGAAGCTTTATAGGAATAAAAAAAGAAATTGATAAAACTACCTATGGTGATAATGCTTTTTTATTTGAATTTGAAGAAGAAAAATGAGTTTAAATCTAAAAATAAAATACAAAAAATAAAAAGAAAGGAATTATAATGAAAATAACAATTAATAGAAGATACACAGGAAAAACTTGCGTTATTGGTAAATTTAAGGTTTTAGATGATGATGATAAAATTCTTTTTGAATGTTTTTCTTTAGAAGAAGACAAAGAAGGTTTAGAAAGTGGCAAAGATTTAAGAATACCTGCTGGAGTTTATGATTTGAAAAGACATATAAATTCTAGTTTTAATGATAAAGGAAAAAAAGAAGTTGCAGGAGTTATTGTATTAAAAGAAGATGATAGCGTTTTAAATATCTACAACGATGATGTACCTTTTGATAGACACATTTTAATACATTGGGGAAATACAGACAAAGATACAAAAGGTTGTATTTTACTAGGTTTAACTAAGAGTGATGAAAGTGTCGGTCAAAGCAGACAAGCTTGTAAAGAATTTTATGATTTGGTGTATGGTAAAAATCTTGAAGACATTAAATTAGAAATAACAAATGAGTTAGCATGAGTTCTATATTTTCATATATCCTAGGAGATAAAAAACTTTATATTGCTTTAGTACTTATGACAATTTTAGCAGGGTATTTTTATCTAAGACTTGATAGCACTCAAGCAAAATTAGAAAAAAGTCAAAGTAATTTAGCTTTGGCTTTAAAAATAAATGAAAATAATCAAGAAAAATTAAAAGAATTAAATCAAATTCATAAAACAGAATTAAAGGCTTTAAATGAAGCAAACAATCAAAAAAATCAAGTACAAGAAAGGGTGCAATATGTTAAAGAATACATTTATAAAAGCAATGAAAATAATATTACCAAGCTTTTTAACGATGTCGTTGATAGGTTGTGGGATGCAAACTCAACAAGTAGTAACCAAAATAGAAATTCAAAAAGTAAAAATTCCGCAAGAACTACTAACATTAAGCCCCCTTGAAAAGCCAAAGGCAAAAAATGAACTAGATATTTTAAATGCTTATTCTATGCTTTTTTACAAATACAAACAGTGTGAAATTCAGATAAGCAAAATAAAGGAGCTAAATAATGAGTAA

Protein sequences of DBSCAN-SWA_2

>NZ_CP008787|475881:488374|479990_481025_+|WP_038402077.1|DBSCAN-SWA
MALPSMGHTSPATENVKLKQSIYETIIKIGATETPILNKIGTSKVTNPLTHSWITDTFEEPKKNANLELSKFVGETKNTAQKTTNATQIFITEAMVSKALLKANQYGGNEMEHQIGKKTKEHKMDMEYALFGLGRDSDVKKSVFKDYVQAQEATSGEMAGLFHYIAKGKDSFADGKRGNVLAFDETGDWSGTATELTEDKLNQILQTIWNSGVTPKDVFLGADLKGAINKFATRILGNETKLAGQVVSLETDFGTVNFHMHRLLSPKYGLGDVLIAGDFEYMKHGLYIPTMIEDVPTDITAKAKRFYTQSTLEVRNADAFAIGVGLTSGNNAKAKAVLKAAKGA
>NZ_CP008787|475881:488374|481024_481429_+|WP_002861675.1|DBSCAN-SWA
MLCATAKKLIIAKVKNSYKMIEDDEVLKAYFMEAFYYILSKCVPSVLLKNVEQGEKVFRQVRNNHFLIIPDEPDFDNEKEHLMIDETLSFAVINYVCYLITRCEEKDFLALCDKIIYEYIANDGKELDDERTWL
>NZ_CP008787|475881:488374|481409_481604_+|WP_002799287.1|DBSCAN-SWA
MKEHGCNCNFTKKFNRALSYKDYVQSINSADFIAYLDDKKWLLAMDDLLFFCEKRIKDSDYYEG
>NZ_CP008787|475881:488374|485288_485672_+|WP_002869963.1|DBSCAN-SWA
MSTENIIKEGAILGSLSGSALLGLMVFVLAGIAWHLYKTLHKEAGERTKELISETKNTNVLIREQIAVSRASSDSLVKFIETHCSKTNDKLEAIETDLMRMDERLVKLTQIRNDELRSIFKKKENND
>NZ_CP008787|475881:488374|481606_484249_+|WP_038402079.1|DBSCAN-SWA
MGTSLNELKTGREKLEIINQVLARINSISEAIDNTRLDEVVGLKQACESLKNECLKFKNDIVDKNDDILSKYDDINKKYSNISEKYNNVNAKFDYIKEAYEDFSLNKQEIQNIKDFLENNTEEFENLKKDIQKYEEIKFNLDNYINEIKQNKDFVKEYFDLNTKIKDEILSELNHALEIVDSLHLNVDELKEIKPELISIKKEVKDLANEAKLVVSEASEIIKNKINTIFFENQRLNQEMIDSVKKLEEIKFDIGVKYKEIASAYELLLESKQNIEDLREVIALYKEFENDITSYSQIIKDFKSKIENLERDLKSQSESIYSSLNDKQNEILKKLNEVKNEALVKFDELTAKCEGYKIHFEQSYDRFNQRALIANEDLGRLAEVAKKELGNDKLIYETELKVLAEETIKQMEEMLKGLSDERNEVTEVFETQKKEFTTLVDTSKVMIDNLNHIFNANYQAKKNEFSIIFNEKLHSLNENKQDFLNELVSAKENGLNKINETKEQSLNEIIQTKEQGLNELETKKGECIDEIDNQARIYDISGVKANVEYLLSLLNEKDDGKDDGIKDEIANIEQGIKDKEQELEEIKKQIEEALNNNDELKQKNEELKEIKNQIDEALSQEPPADTSELEERKEELENQIAELEKEIAGELINKKEEIEKELEEANQNLEDKNNELEQNEKDKKLITQKVLDITIKTLEALIDTKVSLNGDEEINGNKTFANPILVKVDPTNDNHLTNKIYVDTALNTKANLNGDNIFNGTNIFNKALTSPIDPTNDNHLTRKWYVDYGGGIKNLGTTGSINLDLRQAQHFILTANAGTRIGISNWGGAGKSGTITINNCQNVAGFNAPFNFRIAQSGFSGTETFAYFCVSASHIRIART
>NZ_CP008787|475881:488374|485664_486039_+|WP_002865354.1|DBSCAN-SWA
MTKTELKRVCVKPYDKDRFEVIQDYEFILPNYKGIVPQGFKTDGASIPRIFWSIYPPFKSEYFSACVVHDYLCINAKSRDDYRLADLVLKEAMQALEINKFKIFVFYCSCNLFHQIKCLIKGIR
>NZ_CP008787|475881:488374|475881_479583_+|WP_038402076.1|DBSCAN-SWA
MNIREFLLEKPQENNIISFLQDGTSQSENQNTSEYLSNLKNEVINDFYKNKDKYDKEYEKYNFKDQNLTNPMGNISEYKRDLYDYNKNPSMNADDLSNYILDKQSKFNASKPIFADDNEVARKSNQFMRDLGDELQKSGRGRLLQDDDGSYWVQDNNGNYSKVQGSTMGDLYRGLRDNGASMALGTAGAIGGTMLGGGVGMVAGGALGASLGAGYDYYGNTKDTNQDMNLKEALMLMGENAGFSLIGDAAFAGVAKGARALKNTYNMAKTGAQAGKDMIDGMAVKGGNLKENIGDKLRKISPSILNDLASQGSETSKAYARELIESGNRNYDDILQKSRAMPLEVNQGNALVDGVASKIKDFSNTAKNGFVKNTADNVTNSLNNISKNIGSKEAALNQQDLINLSFMNDDLANMARSVLANDPKMANKVANSLHLQDEAILKELNLNNASKADELYALRDARAKRAYDEFGKGLDKLDELNPNGVKVDKQTIDDIVLNSSVYSESTPAMIKNFIHEAKSGALDGKSVKEIYDRIDAIGNKIKESSSYNYKDFLNSLKDAFLENIVKSADNPQEAKEILTKIRKDYADFKVYDKSKLGKKLEGSEKEISKDIDKILNETNPKKNYEAITKGLNDDEIKVLDNQIITRALEKNKVNIGDANNPKFAVNYKAVMDNFENFKPKSKSGQEKIEVLKTIGDLRTNFETVIDGILNSKAKELGHGISTNFIERAKTMLVNNFTDYIAFYFMRLWEVGKRAGTRIQMRRGFSNINNLKDFDRSAKEFIESIKDKTLKEEAQEARKEFNSKVKDLIKGDNFFMDKADPKDNSLRFIGKNGKEYTINKDVRNEWMKTFNLKNIDDEYIPNIPKEAKIALKDREIKLTKGSLLKLIEKDRIKYIPHIKETLESPQAILKDKDDFIFIKNIDNQTYFTSIGKDYETHLTIISNSPKKQNNIKNKMKNAEVVYYNNARALPTSRASSETKQVSFSNENSTQAKPKKNLMDDIKDNIKNKEIEKKNKKSVKQRLDEKIQNDKKASEDILKRYDNFLKENKDYNFDFLDNMNLNTVEYNLTRQMIINAKESTNKGVKKDIPSALRGKIEQELNIQPLKEFGENYAEYYHDGARAIKKLLIEKQGQVAGAFHRKDLGDIDLVWGDGNFGLSHIVNRREEDFIKQGLNKIEAKNKALNFIKEIENIINNGNVKKGNNRAFIDVKNSRVMVALDYKGKDKKWIITAYNFY
>NZ_CP008787|475881:488374|484250_484640_+|WP_038402080.1|DBSCAN-SWA
MTSALLTGSFNKISIGGKDEFFANKDLSIPPLNVNKTLNSSKRYYLIIECEFVRSFSYKSATQGRGIFINHSHFKTIVAQNSGGLGQKFRWEGWVQGSMIKQVNLDRNWNYNPTSQSHTRTTKFELYWN
>NZ_CP008787|475881:488374|487363_487834_+|WP_038402084.1|DBSCAN-SWA
MKITINRRYTGKTCVIGKFKVLDDDDKILFECFSLEEDKEGLESGKDLRIPAGVYDLKRHINSSFNDKGKKEVAGVIVLKEDDSVLNIYNDDVPFDRHILIHWGNTDKDTKGCILLGLTKSDESVGQSRQACKEFYDLVYGKNLEDIKLEITNELA
>NZ_CP008787|475881:488374|487839_488259_+|WP_038402201.1|DBSCAN-SWA
MFSYILGDKKLYIALVLMTILAGYFYLRLDSTQAKLEKSQSNLALALKINENNQEKLKELNQIHKTELKALNEANNQKNQVQERVQYVKEYIYKSNENNITKLFNDVVDRLWDANSTSSNQNRNSKSKNSARTTNIKPP
>NZ_CP008787|475881:488374|484656_485292_+|WP_038402082.1|DBSCAN-SWA
MFYNIKNKSLKYDDIFLKDVKIQNEEGEIDAQDTYFLSACDDKLLKELGFAKVKEEEIPSFNEKIEELRQIQTYDEENNLYIISYEIKEKALEELKELKLEELKAIKEEKLLFMPFKNTIFQIDTEAKINISGKVSEIMLANLNNTPLENIAWIDKDNKIITFNKEEFLEFGVGIAKYTESIIFKNDELRNKVKNATSLEELNLIAWESEK
>NZ_CP008787|475881:488374|488176_488374_+|WP_072224811.1|DBSCAN-SWA
MQTQQVVTKIEIQKVKIPQELLTLSPLEKPKAKNELDILNAYSMLFYKYKQCEIQISKIKELNNE

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038402076.1|475881_479583_+	hypothetical protein	A0A1S5RF23	Helicobacter_phage	3.4e-27	42.0
WP_038402077.1|479990_481025_+	DUF5309 family protein	A0A2I7SBK1	Pseudomonas_phage	9.8e-17	30.2
WP_002861675.1|481024_481429_+	hypothetical protein	NA	NA	NA	NA
WP_002799287.1|481409_481604_+	hypothetical protein	NA	NA	NA	NA
WP_038402079.1|481606_484249_+	hypothetical protein	X2KLU0	Campylobacter_phage	1.8e-38	57.1
WP_038402080.1|484250_484640_+	hypothetical protein	NA	NA	NA	NA
WP_038402082.1|484656_485292_+	DUF4376 domain-containing protein	X2KRD7	Campylobacter_phage	8.5e-96	99.1
WP_002869963.1|485288_485672_+	hypothetical protein	X2KXD5	Campylobacter_phage	2.4e-61	100.0
WP_002865354.1|485664_486039_+	DUF1353 domain-containing protein	X2KPN9	Campylobacter_phage	7.8e-65	93.5
WP_038402084.1|487363_487834_+	hypothetical protein	X2KQ95	Campylobacter_phage	5.7e-65	78.5
WP_038402201.1|487839_488259_+	hypothetical protein	X2KXD3	Campylobacter_phage	2.3e-41	86.1
WP_072224811.1|488176_488374_+	hypothetical protein	X2KQZ7	Campylobacter_phage	4.1e-25	95.4