CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009159	Actinobacillus suis ATCC 33415 chromosome, complete genome	3 crisprs	DEDDh,cas9,cas1,cas2,DinG,csa3,WYL,cas3,PD-DExK	1	11	3	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009159_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009159_1

484337-484409

Orphan

Consensus_repeat	Method
CGCCCCACGTAAAAAACTAAAAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009159_1

>merge|NZ_CP009159|1|484337-484409|CRISPRCasFinder
CGCCCCACGTAAAAAACTAAAAGCTCGATTGAAATCTGTGGCGGTAGGTTCGCCCCACGTAAAAAACTAAAAG

>NZ_CP009159|1|1|484337-484409|CRISPRCasFinder
CGCCCCACGTAAAAAACTAAAAG	CTCGATTGAAATCTGTGGCGGTAGGTT
CGCCCCACGTAAAAAACTAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009159.1\|WP_014991229.1\|499771_500188_-\|nucleoside-diphosphate-kinase	unknown	unknown	gnl\|CDD\|179085
NZ_CP009159.1\|WP_014991212.1\|476542_476860_-\|ribosome-associated-translation-inhibitor-RaiA	unknown	unknown	gnl\|CDD\|182378
NZ_CP009159.1\|WP_014991230.1\|500242_502300_-\|methionine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234655
NZ_CP009159.1\|WP_014991216.1\|480791_481649_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP009159.1\|WP_014991222.1\|486697_487645_-\|1-phosphofructokinase	unknown	unknown	gnl\|CDD\|181923
NZ_CP009159.1\|WP_014991218.1\|483082_483532_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226285
NZ_CP009159.1\|WP_039194945.1\|489822_492108_+\|1,4-alpha-glucan-branching-protein-GlgB	unknown	unknown	gnl\|CDD\|235445
NZ_CP009159.1\|WP_014991228.1\|497161_499663_+\|glycogen/starch/alpha-glucan-phosphorylase	unknown	unknown	gnl\|CDD\|340853
NZ_CP009159.1\|WP_014991225.1\|492111_494094_+\|glycogen-debranching-protein-GlgX	unknown	unknown	gnl\|CDD\|235152
NZ_CP009159.1\|WP_014991213.1\|477024_477966_+\|LpxL/LpxP-family-Kdo(2)-lipid-IV(A)-lauroyl/palmitoleoyl-acyltransferasee	unknown	unknown	gnl\|CDD\|235880
NZ_CP009159.1\|WP_014991223.1\|487659_489564_-\|fused-PTS-fructose-transporter-subunit-IIA/HPr-protein	unknown	unknown	gnl\|CDD\|237502
NZ_CP009159.1\|WP_014991221.1\|484962_486624_-\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|236740
NZ_CP009159.1\|WP_014991226.1\|494130_495441_+\|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl\|CDD\|234824
NZ_CP009159.1\|WP_014991227.1\|495535_496972_+\|glycogen-synthase-GlgA	unknown	unknown	gnl\|CDD\|234809
NZ_CP009159.1\|WP_014991211.1\|475694_476483_+\|tRNA-pseudouridine(38-40)-synthase-TruA	unknown	unknown	gnl\|CDD\|234577
NZ_CP009159.1\|WP_014991210.1\|474953_475610_+\|GTP-cyclohydrolase-I-FolE	unknown	unknown	gnl\|CDD\|236472
NZ_CP009159.1\|WP_014991215.1\|479113_480652_-\|OFA-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340911
NZ_CP009159.1\|WP_014991217.1\|482258_483086_-\|methanol-dehydrogenase	unknown	unknown	gnl\|CDD\|224429
NZ_CP009159.1\|WP_014991214.1\|478129_479017_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP009159.1\|WP_014991219.1\|483598_484183_-\|LemA-family-protein	unknown	unknown	gnl\|CDD\|377192

Protein	Function_ID	Function_description	E-value
NZ_CP009159.1\|WP_014991229.1\|499771_500188_-\|nucleoside-diphosphate-kinase	gnl\|CDD\|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	7.1762e-79
NZ_CP009159.1\|WP_014991212.1\|476542_476860_-\|ribosome-associated-translation-inhibitor-RaiA	gnl\|CDD\|182378	PRK10324, PRK10324, ribosome-associated translation inhibitor RaiA.	1.97562e-36
NZ_CP009159.1\|WP_014991230.1\|500242_502300_-\|methionine--tRNA-ligase	gnl\|CDD\|234655	PRK00133, metG, methionyl-tRNA synthetase; Reviewed.	0
NZ_CP009159.1\|WP_014991216.1\|480791_481649_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP009159.1\|WP_014991222.1\|486697_487645_-\|1-phosphofructokinase	gnl\|CDD\|181923	PRK09513, fruK, 1-phosphofructokinase; Provisional.	0
NZ_CP009159.1\|WP_014991218.1\|483082_483532_-\|membrane-protein	gnl\|CDD\|226285	COG3762, COG3762, Predicted membrane protein [Function unknown].	4.51454e-31
NZ_CP009159.1\|WP_039194945.1\|489822_492108_+\|1,4-alpha-glucan-branching-protein-GlgB	gnl\|CDD\|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
NZ_CP009159.1\|WP_014991228.1\|497161_499663_+\|glycogen/starch/alpha-glucan-phosphorylase	gnl\|CDD\|340853	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins. This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	0
NZ_CP009159.1\|WP_014991225.1\|492111_494094_+\|glycogen-debranching-protein-GlgX	gnl\|CDD\|235152	PRK03705, PRK03705, glycogen debranching protein GlgX.	0
NZ_CP009159.1\|WP_014991213.1\|477024_477966_+\|LpxL/LpxP-family-Kdo(2)-lipid-IV(A)-lauroyl/palmitoleoyl-acyltransferasee	gnl\|CDD\|235880	PRK06860, PRK06860, lipid A biosynthesis lauroyl acyltransferase; Provisional.	0
NZ_CP009159.1\|WP_014991223.1\|487659_489564_-\|fused-PTS-fructose-transporter-subunit-IIA/HPr-protein	gnl\|CDD\|237502	PRK13779, PRK13779, bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein; Provisional.	0
NZ_CP009159.1\|WP_014991221.1\|484962_486624_-\|PTS-transporter-subunit-EIIC	gnl\|CDD\|236740	PRK10712, PRK10712, PTS system fructose-specific transporter subunits IIBC; Provisional.	0
NZ_CP009159.1\|WP_014991226.1\|494130_495441_+\|glucose-1-phosphate-adenylyltransferase	gnl\|CDD\|234824	PRK00725, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP009159.1\|WP_014991227.1\|495535_496972_+\|glycogen-synthase-GlgA	gnl\|CDD\|234809	PRK00654, glgA, glycogen synthase GlgA.	0
NZ_CP009159.1\|WP_014991211.1\|475694_476483_+\|tRNA-pseudouridine(38-40)-synthase-TruA	gnl\|CDD\|234577	PRK00021, truA, tRNA pseudouridine(38-40) synthase TruA.	4.71635e-147
NZ_CP009159.1\|WP_014991210.1\|474953_475610_+\|GTP-cyclohydrolase-I-FolE	gnl\|CDD\|236472	PRK09347, folE, GTP cyclohydrolase I; Provisional.	5.67834e-99
NZ_CP009159.1\|WP_014991215.1\|479113_480652_-\|OFA-family-MFS-transporter	gnl\|CDD\|340911	cd17353, MFS_OFA_like, Oxalate:formate antiporter (OFA) and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of Oxalobacter formigenes oxalate:formate antiporter (OFA or OxlT) and similar proteins. O. formigenes, a commensal found in the gut of animals and humans, plays an important role in clearing dietary oxalate from the intestinal tract, which is carried out by OFA/OxlT, an anion transporter that facilitates the exchange of divalent oxalate with monovalent formate, the product of oxalate decarboxylation. This exchange generates an electrochemical proton gradient and is the source of energy for ATP synthesis in this cell. The OFA-like subfamily belongs to the Monocarboxylate transporter -like (MCT-like) family of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.0708e-120
NZ_CP009159.1\|WP_014991217.1\|482258_483086_-\|methanol-dehydrogenase	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	2.32802e-61
NZ_CP009159.1\|WP_014991214.1\|478129_479017_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	2.04335e-165
NZ_CP009159.1\|WP_014991219.1\|483598_484183_-\|LemA-family-protein	gnl\|CDD\|377192	pfam04011, LemA, LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain.	1.09487e-67

>NZ_CP009159.1|WP_014991219.1|483598_484183_-|LemA-family-protein
MKKIFWILVIAVLAVGGFSLTKYNDLMRAEEDINSVWGNVESAYQRRADLIPNLVNTVKGQANFEKETLTSVIEARAKATAVTIDPNNATEEQMAKFQEAQQGVNSALSRLLVSVEKYPELKAHEGFLNLQAQLEGTENRINVERNNFNAAVKEYNKQVREFPTKIAAMIMGFKAKPQFKAEAGSEKAPTVNFN
>NZ_CP009159.1|WP_014991218.1|483082_483532_-|membrane-protein
MKLFSFLSNKLPVDTQRIEQAISHLEHQTSAELRVVVERKTKEKIDAMARANQLFDELKMRETADRNGVLIYLSFKPHNLAIVGDKAIHEKVGQVFWQSVYDAMKQQCQQADYTQAICDGIKQVEAQLVAYFPRRDDDTNELSNEVVIK
>NZ_CP009159.1|WP_014991217.1|482258_483086_-|methanol-dehydrogenase
MIKAFFKPIWFILLAFFTLKAAAADNYPAAPNPFYYVTDYTKTLTQQEWRTLEDALIANRAKTSSQIIVVIVPSTNGEDVASYSHNLFNKWGIGRTKNNENNGILLLIAKNDRKLFIATGRGLEGVLPDAIASTIIRHNITPYFKQNLYAEGIASGLSAIMAAINGEYAAYDSYGEDAGEESLEQIDGLLFFLVAGIVIFLIFRPGRNTQYISPSAADQLGRIIINSSRRRGSFGGGFGGDSSGGFGGGFGGGSRGSGDSFGGGSSGGGGAGGSW
>NZ_CP009159.1|WP_014991216.1|480791_481649_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MTAQIISGTAVAKQVKTNIAEQIQAHTAQGKRKPGLAVILVGMDPASQVYVNSKRKSCAEIGIESKSYDLPADTSEAELLAIIEQLNHDDSVDGILVQLPLPKQIDATKVTEAIVPHKDVDGFHPYNVGRLCQKIPTLRSCTPYGVMKLLESTGVNLAGLHAVVVGASNIVGRPMAMELLLAGCTVTVTHSRTKDLAYHVSQADIVVAGVGKPNFVKGEWIKDGAIVIDVGINRVDGKLVGDVEYATAEPKASFITPVPGGVGPMTVAMLMQNTLQAYEAHLQAV
>NZ_CP009159.1|WP_014991215.1|479113_480652_-|OFA-family-MFS-transporter
MSFLDREKTIAPLQFNRWLIPPAALAVHLSIGQIYAYSVFNAPLTKVIGITQSAADDWKLTTIGWVFSIALAVLGASAALFGTWMERVGPRKAMFVATICFSLGFLVAAFGVHTHNLWLLYLGNGVLGGIGLGLGYIGPVSTLMKWFPDKPGMATGLAIMGFGGGAMLASPISVALMDFFSNPTSVGIVETFIVLGVFYFIFMMFGVFTIRLPHPEWKPKGFVDNKPKNKLVSSHNVGVNKAMKTPQFWLLFWILCLNVTAGIGVLGQASVMIQELFSEISVGKQAAISTLAAAGFVGLLSLFNMGGRFFWSSISDKIGRKNLYSIFFLLGSVLYFAVPSLGESGNKALFVVGFCVIISMYGGGFAAIPAYLRDLFGTYQVGAIHGRVLLAWSTAAVAGPVLVNYIRQMQIDSGVPAAQAYSITMYIMAALLIVGFFCNLSVKAVHEKHHELPIKEAAYSAKPSDETVISDTYLVAEEVAHGGCMVWLRWIIVTVPLTYGVIMVFAKVVELF
>NZ_CP009159.1|WP_014991214.1|478129_479017_+|4-hydroxy-tetrahydrodipicolinate-synthase
MATPLFHGSIVALVTPMTHGEVNYEELKKLVEYHVQAGTHGIVSVGTTGESTTLSIDENVKVIKKTVEFADGRIPVIAGTGSNATSEAIILTKLLTNSGVAGCLSVVPYYNKPTQEGMYLHYKAIAESTDLPQILYNVPGRTGSDLKPETIGRLAEIPNIVGVKEATGDLTRLPLIKQLAGEDFIFLSGDDATGLESMKLGGQGVISVTNNVAAADMAKMCELALAGKFDEAEVINQRLMALHHDLFIEANPIPVKWAAYKLGLISEPNLRLPLTTLSEGAQPAVLAALQKAGLI
>NZ_CP009159.1|WP_014991213.1|477024_477966_+|LpxL/LpxP-family-Kdo(2)-lipid-IV(A)-lauroyl/palmitoleoyl-acyltransferasee
MTDTQKFPPFEWRFLHPRYWGLWLGLGLFKLILCLPYPALVVVGKGLGKLFAKLGFGKRRMRIARRNLELCFPQYSAEQIQTILDKNIESVGMAIIETGMAWFWSDNRILKWSKIEGLEYLKNQPEGAGILFVGVHFLTLEMGARIVGLHHQGVGVYRPNDNPLLDWIQFRGRVRSNKAMLDRKDLRGMIRALKAGETIWYAPDHDYGRKNSVFVPFFAVPEACTTAGTRMLLRSAPNTVVVPFSPIRNDDFSGYTVKISPAVDFSECENELDTATKMNKVVAAEILKSVSQYMWLHRRFKTRPQEADKSLYD
>NZ_CP009159.1|WP_014991212.1|476542_476860_-|ribosome-associated-translation-inhibitor-RaiA
MTINISSKQMDITPAIRTHIEERLAKLEKWQTQLINPHFMIHKLPNGYEVEASIGTPVGELFAKADNEDLYKAINEVETKLETQLNKLVHKNEARRTDNTLKSVQ
>NZ_CP009159.1|WP_014991211.1|475694_476483_+|tRNA-pseudouridine(38-40)-synthase-TruA
MKIALGIEYDGSRYFGWQRQDEVESVQQKLEEALSVVANAPVEVFCAGRTDSGVHGTGQVVHFETEAVRPLQSWCFGTNANLPDDIAVKWAVEVSEDFHARFSATARRYRYIIFNNKLRSAILPKGVSHYHHELNHQKMHEAGQFLLGENDFSSFRAAKCQSHTPWRNIHHLNVSRLGNYIVVDIQANAFVHHMVRNIVGSLIEVGQGRQPVEWIQWLLAQRDRTLAAPTAKAEGLYLVDVHYPEHFGIPKTALGPLFLADN
>NZ_CP009159.1|WP_014991210.1|474953_475610_+|GTP-cyclohydrolase-I-FolE
MSIISAEAQKVREALIAKGIETPTIQLTKDKDSRRAEIQQHMRSVMELLGLDLQDDSLEETPHRLAKMYVDEIFSGLDYATFPKITNIENRMKVSEMVLVDDITLTSTCEHHFVTIDGKVAVAYYPKKWVIGLSKINRVVQFFAQRPQVQERFTEQILTAFQTILETEDVAVYVKATHFCVKCRGVKDTNSYTVTSAFGGAFLEDRETRKEFLGLINK
>NZ_CP009159.1|WP_014991221.1|484962_486624_-|PTS-transporter-subunit-EIIC
MNISFVFPQSLGKARAFLVNEVLSAAAKQQGHQVVNAEQADFVVLFNDEIPTSAAGKQGAVVNLDQAFAQPEATLKQAVENAKTFANATASSVSSSGVKNIVAVTACPTGVAHTFMSAEAIENYAKAQGWNVKVETRGQVGAGNPISAEEIAAADLVFVAADIDVDLDKFKGKPMYRTSTGLALKKTAQEFEKAFAQATVYQGGTTAAQQAEGSASGEKKGLYKHLMTGVSHMLPLVVAGGLLIAISFMFGIEAFKDETIAGGLPKALMDIGGGAAFHLMIAVFAGYVAFSIADRPGLAVGLIGGMLATTAGAGILGGIVAGFLAGYTVKFLNGVIQLPASLTSLKPILILPLLGSAIVGLAMIYLINPPVKGIMDALVEWLNSMGQANAIILGAILGAMMCIDMGGPVNKAAYTFGVGLIASQQYTPMAAVMAAGMVPPIGMAIATLIARNKFTSNQRDAGKASFVLGLCFISEGALPFVAADPVRVIISSVLGGATAGAISMAFAITLQAPHGGLFVIPFVSQPLMYLAAIAIGSVVTGVIYAAIKQKASE
>NZ_CP009159.1|WP_014991222.1|486697_487645_-|1-phosphofructokinase
MTQQLRIATVTLNPAFDLVGRLQRIEVGEVNTVETLGLYPAGKGINVAKVLADLGVKLAVTGFLGAENQGDFVQSFKQNGVDDQFYRIDGKTRINVKITETEADVTDLNFLGFEISAEDWANFTAQSQQWAKEFDLVAVCGSLPRGVTAQQFSQWLESLHQQGLKVVLDSSNAALTEGLKAHPWLVKPNRRELEVWANRPLNSLEEVIAAAQELRAGGIENVIISMGADGSVWLNSEGVVQAQPPRCQNVVSTVGAGDSMVAGLIYGLSQGWDKAKTLAFASGTSALAVSQSNVGISDRKALDEIVAQVKLTQLR
>NZ_CP009159.1|WP_014991223.1|487659_489564_-|fused-PTS-fructose-transporter-subunit-IIA/HPr-protein
MLNLSAQNIRLNGTASNKEEAIKLVAAGLVANGNVAEGYETGMLARETQTSTFLGNGIAIPHGTLDTRHLVQNTGVQIYQFPQGVEWGEGNKAYVVIGIAAKSDEHLALLRQLTGVLSDEDAAETLAKTQDVEEFAAVLSGKKSLPVISEETISLNIDSASLITLSAINAAKLQEKGYVTQAFISDVVANSPLNLGNNLFVTDSANGNQANGFAVARSQQGQTLVTIAAADNNLSALIARLLNADIRKQLTTASAAQIIALFGANENAASAVSSTAAEQTSQQVIGTFTVRNDNGLHARPSAVLVQTLKPFAAKVTVENLDRGTAPANAKSTMKVVALGASQAHRLRFVAEGEDAQQAIEALAKAFVEGLGESVSFVPAVEDTIEGAAQPQAVESAKNSANPTASEQPVAGQVIGTFTVRNDNGLHARPSAVLVQTLKPFAAKVTVENLDRGTAPANAKSTMKVVALGASQAHRLRFVAEGEDAQQAIEALAKAFVEGLGESVSFVPAVEDTIEGAAQPQAVESAKNSANPTASEPTVEGQVEGQVEGTFVIQNEHGLHARPSAVLVNEVKKYNATIVVQNLDRDSQLVSAKSLMKIVALGVVKGHRLRFVATGDDAQKAIDGIGAAIAAGLGE
>NZ_CP009159.1|WP_039194945.1|489822_492108_+|1,4-alpha-glucan-branching-protein-GlgB
MTTYNYSEQDSSFIEQLSGGYCKDPFSYLGSHFENGHCVIRIYLPEADAVKIVDEKGRCLSDTLKIDDCGVFIAVLDCSDPHFYYRLRVTYPLGEIDIEDPYRFKSSLFELDNWLLSEGTHLRPYEKLGAHFEIQENIDGVRFSVWAPNAKRVSVVGDFNYWDGRVHSMRFHAESGIWDIFIPNIDAGALYKFELLDSHGQLRLKSDPYAFASQLRPETASIVTGLSEIVQVEEKLRRANNIDQPISIYEVHLGSWRRNLENNYWLNYDEIASELIPYVKDMGFTHIELLPITEYPFDGSWGYQPIGLYSPTSRFGSPHDLRSFIRKAHAAGIAVILDWVVGHFPTDSHGLVQFDGSHLYEHQDPREGYHQDWNTLIFNYGRNEVFNYLSGNALYWTERFGIDGLRVDAVSSMIYRDYSRKDGEWIPNQYGGRENLEALDFLRRTNQMLEQEGHAAVTIAEESTSFNGITHAVSQQGVGFDYKWNMGWMNDTLRYMALDPIHRKYHHDWMTFGMIYQYSEKFILPLSHDEVVHGKGSLIGKMPGDCWQKFANLRAYYGYMWGYPGKKLLFMGNEFAQGREWNFNESLDWFLLGEEGGNWHKGMLNWVRDLNRVYQQYPALYQLDHEPSGFEWLVVDDWQQSVFAFERKAKDGSSVIVVSNFTPIVRYNYRIGVAQDGVYKEILNSDAAYYAGSNVGNYGEILCEEEPSHGKPYSLSVSLPPLATIFIVRTAKPEEEQALIKKVESAFKKTKNAKKKRKSKK
>NZ_CP009159.1|WP_014991225.1|492111_494094_+|glycogen-debranching-protein-GlgX
MKISVGKPFPLGAQAGKKGTNFAIFSANATAIELCIFDDKGEQCYPMQRSGDIWHLFVYGVGSGTLYGFRVSGDVDEQKGALFNPNKLLLDPYAKRVVGLPDAHDEKALSYFVWNDPQDNAHLAPKSVVVTDDFDWTGEKRPHYSWAETIIYEAHVKGFSRLNHNIPEPLRGTYAGMAHPASIAHLKRLGVTTIELQPVSYHADEVHLQRLGLTNYWGYSVLAHSAIDPCLAWDQEDPLSEFKYLVKTLHQNGFEVILDVVYNHTVEAGKDGMMLCQRGIDNQSYYWLDEQGEYRNWTGCGNALNLVHPMVCQWAVDSLVYWVEECHIDGFRFDLATTLGRTPDFSNVAPLFEKIKQTPALQQIKLIAEPWDIGPEGYQVGHFPAGFAEWNDKYRTTMRSFFLRESGNLAEFARRLAGSDDLYWQYAPSKSINYFASHDGFTLQDLVSYNKKHNQANGEQNRDGDEHNYSNNHGVEGDTDNELVNILRDQTACSLLATLFLSNGVPMLRAGDELGHSQKGNNNSYCQDNETTWINWQQTNDKRIDYVAKWIDLRKQISLLSHQSHWWTENDVQWFSAYGEIMQVDDWHNHSLKALQILLQEQWLILINAKKDKQQFFLPQGKWHFYLGKETATLIADAQAVTLQLEQMGVCVLQRKLGSH
>NZ_CP009159.1|WP_014991226.1|494130_495441_+|glucose-1-phosphate-adenylyltransferase
MLTQEKNDLTRNDITNDTLVLILAGGRGSRLYELTDRRAKPAVYFGGSRRIIDFALSNCINSNLLKVGVITQYAAHSLLRHLQRGWSFLPYERNQYIDMLPARQQLDENTWYRGTADAVYQNMAMMKSHYRPKYVVILAGDHIYKMDYTQMLRDHVESGAKCTVGCIEVPREQAVEFGVMAVNDKLKVKEFVEKPSNPPAMPDKPNSSLASMGIYVFDADYLYDVLEREASIPGTSHDFGKDIIPKAVEEGVLYAHPFERSCKGRNASGSIYWRDVGTIDSYWAAHMDLVSEVPQLDLYDESWPIHGRPQQTAPARFFYKKARQHTLDNSLIAGGCVVTDAEISNSVLFAKVKVDAETVIEHTVILPQVTIGKNCVIKRAVIDRHCTIPDGLEIGVNLEEDAKRFRVSKGGIVLVTQKMLDSLSGYESSIKFHHTI
>NZ_CP009159.1|WP_014991227.1|495535_496972_+|glycogen-synthase-GlgA
MKILHICSEMYPLIKTGGLADVMGALPYAQQQAGNDVRVLLPLYPQVAEKIGETNEVVTLGTFAGLVTIHFTYFNGLGIYLIDAPHLFQRSGNPYHDSGYADYPDNYKRFAILGYLGAQLSEGLDHWWGKADIVHAHDWQGGLACAYLKSWHSPVKSVFTIHNIAYPGRFQPHHLPELGFSWDFFQAEGMEFYGEISYLKAGLYYADRITTVSPTYALEITEQIAGGGMHGLLQTRKAQGRLHGVLNGVDDKVWNPETDENIVATYKPSYMHGKAKNKAELQRMFNLPEDKDAMLMVMVTRLTEQKGADFLLDRIDDVMQQHVQLIVLGSGSPHLEYLLNEARSRYPEQIGLYIGYNEALSHQIIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRQTGGLADTVVDSHKDSIEQRNATGFVFKYPSSDDFFEAFQRAVNLWKKQKLWSSVRQNALAQDFGWARAAAAYQAIYQEIV
>NZ_CP009159.1|WP_014991228.1|497161_499663_+|glycogen/starch/alpha-glucan-phosphorylase
MGNKILSPENIQHVKDAILYKLVYALGVEPREASKRNWLNAALRVVRDLSTESWLQTRRSQVANASRRVYYLSMEFLMGRTFSNAMIAEGVYELVDAALKELGQNIEEIINEEGDPGLGNGGLGRLAACYMDSLAAMKIPAIGYGIQYEYGMFRQEIRHGEQVEQPDQWLENEFVWPYLRSSKRFPIRFGGRIWQEGKKTVWQPDEEIIAQAHDQLIPGYETTATNSLRLWSAHASGKGFGLADFNRGDYFAAMSHQNLSENVSRVLYPDDSTYNGRELRLRQEYFLCSASVQDIIRRHEAECGSCVNLADKVAIHLNDTHPTLAVPELMRILIDEKGYSWDQAWNMTRKIFYYTNHTLMSEALETWPVEMLGRILPRHLGIIFEINEWFLNEVREKFPGEEDLVQRVSLIDEHGDRRVRMAWVAVVASSKVNGVAKIHSDLMVESIFADFARIYPDRFTNVTNGVTPRRWIKIANPGLANILDKRIGKDWLTDLSELEKFNVFVDDADVQAEIAAVKYENKRKLADYVEKNLGIKLNPEAIFDVQVKRIHKYKRQQLNVLHIITLYNRILKNPNADWTPRVFIFAGKAASAYYAAKKVIRLINDVANVINNDERVRDLIKVVFIPNYGVSLAQMIIPAADVSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEILEHVGKDNIFIFGNTVEQVEELRRNGYSPYHYYETDGELNEAVSQILNGKFSPDDPYRYQDLILNSGDYYQACADFRSYVEAQERVAAAYRNKKAWTRSAIINIANMGYFSSDRSVLDYARDIWHIEPMDEVQLKENTDLASIIESSSKLLIIR
>NZ_CP009159.1|WP_014991229.1|499771_500188_-|nucleoside-diphosphate-kinase
MIQQTLCLIKPDATKRNLIGKILSHLEEAGLTIKALKKVQLTQEQAEGFYAEHQGKEFFAPLVEFMISAPIVAVVLEGENAIAHYRELMGATNPEQRKAGTIRALYAISGRENSVHGSDSEESAKREIAYFFTPNEII
>NZ_CP009159.1|WP_014991230.1|500242_502300_-|methionine--tRNA-ligase
MSNQKRKMLVTCALPYANGAIHLGHMLEHIQADIWVRFQRMRGNEIHFVCADDAHGTPIMLNAAKQGITPEQLIEKAKTDHVADFKGFNISFDNYHSTHSEENRELTTEMYKKLRANGFIKSRVISQLFDPEKQMFLPDRFVKGTCPKCKAEDQYGDNCEVCASTYSPMDLINPRSAVSGATPIVKESEHFFFDLPSFEGMLKEWTRSGSLQSEIANKMQEWFESGLQQWDISRDAPYFGFPIPDAENKFFYVWLDAPIGYMASFKNLCDRSGLNFDEFWKKDSETELYHFIGKDIVYFHSLFWPAMLDGCELRKPTNVFAHGYVTVDGVKMSKSRGTFIQASTYLKHIDPECLRYYYAAKLNERIEDLDLSLEDFVQRVNSDIVNKLVNLASRNASFIAKRFEGKLADKLEDEALFAEFIAQSEQIATHYENREFNKAIRLIMDLCDKANKYVDDKAPWVIAKQEGREAELQAVCSMGIELFRVLMSYLKPVLPQLAERAEAFLQAELTWENIHQPLLGKNVAPFKSLFSRLEKKQIDAVIEETKALFAEQNKAEDKKGKQKVENTENTAVEPIAAEITIDDFAKLDLRVAKVISCEAVPESNKLLKFQLDLGDHQRQVLSGIKAAYNNPEELVGRFVIMVANLAPRKMKFGVSEGMILSAGTGGADLFLLSADEGIRPGMQVK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009159_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009159_2

559621-560646

TypeII

Consensus_repeat	Method
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CRISPRCasFinder
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CRT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	PILER-CR

15 spacers

cas2,cas1,cas9

The CRISPR arrays of NZ_CP009159_2

>merge|NZ_CP009159|2|559621-560646|CRISPRCasFinder,CRT,PILER-CR
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACCCTAAGAATGTTGTTATCAATATTGATTCAATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACCACTATGTTTGCCTTATCTGCTATTGGATCATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACGACAGCATTAATATCGCGATCCGCATCCTCATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACTATAACCGATAAATTGCCAATCATCGGTAAATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACAAAACGTGAGAGAATTTATTCATTTTTGGAATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACCGCTGTTGGATATTTGAGTGGCCAACACTTATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACTTCGTTTACCGCATCATAGTTAAAGCCTTCATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACAAAAAATGCGAAAAATGGCAGCAATATTGAATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACGGAATTTATGAGCCATGTAATATCTATCCCATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACTACACCGTTTGAGCAAGAAGTGCCCTGATTATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACCTTTCGCTCTCGCTTTGGCTCGCCCCATTTATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACAGTGGTTGAGGGTAATGCCTAATGTATGCGATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACATTCTGACCGGGTTTAACAGATATGCTGTCATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACTAGGACGGAGCTTATACCTTCGTAAAGCAAATTATAGCACTGCGAAATGAAAAAGGGAGCTACAACGCAGTGAATGAAGTGATGTAAGCATATAAAATTATAGCACTGCGAAATGAAAAAGGGAGCTACGAC

>NZ_CP009159|2|2|559621-560646|CRISPRCasFinder
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CCTAAGAATGTTGTTATCAATATTGATTCA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CACTATGTTTGCCTTATCTGCTATTGGATC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	GACAGCATTAATATCGCGATCCGCATCCTC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TATAACCGATAAATTGCCAATCATCGGTAA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AAAACGTGAGAGAATTTATTCATTTTTGGA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CGCTGTTGGATATTTGAGTGGCCAACACTT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TTCGTTTACCGCATCATAGTTAAAGCCTTC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AAAAAATGCGAAAAATGGCAGCAATATTGA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	GGAATTTATGAGCCATGTAATATCTATCCC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TACACCGTTTGAGCAAGAAGTGCCCTGATT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CTTTCGCTCTCGCTTTGGCTCGCCCCATTT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AGTGGTTGAGGGTAATGCCTAATGTATGCG
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	ATTCTGACCGGGTTTAACAGATATGCTGTC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TAGGACGGAGCTTATACCTTCGTAAAGCAA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	GCAGTGAATGAAGTGATGTAAGCATATAAA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACGAC

>NZ_CP009159|2|1|559621-560646|CRT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CCTAAGAATGTTGTTATCAATATTGATTCA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CACTATGTTTGCCTTATCTGCTATTGGATC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	GACAGCATTAATATCGCGATCCGCATCCTC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TATAACCGATAAATTGCCAATCATCGGTAA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AAAACGTGAGAGAATTTATTCATTTTTGGA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CGCTGTTGGATATTTGAGTGGCCAACACTT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TTCGTTTACCGCATCATAGTTAAAGCCTTC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AAAAAATGCGAAAAATGGCAGCAATATTGA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	GGAATTTATGAGCCATGTAATATCTATCCC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TACACCGTTTGAGCAAGAAGTGCCCTGATT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CTTTCGCTCTCGCTTTGGCTCGCCCCATTT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AGTGGTTGAGGGTAATGCCTAATGTATGCG
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	ATTCTGACCGGGTTTAACAGATATGCTGTC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TAGGACGGAGCTTATACCTTCGTAAAGCAA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	GCAGTGAATGAAGTGATGTAAGCATATAAA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACGAC

>NZ_CP009159|2|1|559819-560580|PILER-CR
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TATAACCGATAAATTGCCAATCATCGGTAA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AAAACGTGAGAGAATTTATTCATTTTTGGA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CGCTGTTGGATATTTGAGTGGCCAACACTT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TTCGTTTACCGCATCATAGTTAAAGCCTTC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AAAAAATGCGAAAAATGGCAGCAATATTGA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	GGAATTTATGAGCCATGTAATATCTATCCC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TACACCGTTTGAGCAAGAAGTGCCCTGATT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	CTTTCGCTCTCGCTTTGGCTCGCCCCATTT
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	AGTGGTTGAGGGTAATGCCTAATGTATGCG
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	ATTCTGACCGGGTTTAACAGATATGCTGTC
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC	TAGGACGGAGCTTATACCTTCGTAAAGCAA
ATTATAGCACTGCGAAATGAAAAAGGGAGCTACAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009159.1\|WP_014991275.1\|552165_552627_+\|ribonuclease-HI	unknown	unknown	gnl\|CDD\|178927
NZ_CP009159.1\|WP_014991316.1\|569048_569924_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009159.1\|WP_014991317.1\|570092_570308_+\|AlpA-family-phage-regulatory-protein	unknown	unknown	gnl\|CDD\|225848
NZ_CP009159.1\|WP_014991271.1\|547701_548460_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|133005
NZ_CP009159.1\|WP_014991278.1\|558320_559238_+\|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|274694
NZ_CP009159.1\|WP_014991273.1\|549428_550466_-\|glycosyltransferase-family-9-protein	unknown	unknown	gnl\|CDD\|223928
NZ_CP009159.1\|WP_014991276.1\|553300_554818_+\|amidophosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236427
NZ_CP009159.1\|WP_014991283.1\|563349_564351_-\|nucleoid-associated-protein-YejK	unknown	unknown	gnl\|CDD\|178993
NZ_CP009159.1\|WP_014991284.1\|564442_564832_+\|RidA-family-protein	unknown	unknown	gnl\|CDD\|129116
NZ_CP009159.1\|WP_005623488.1\|552783_553287_+\|colicin-V-biosynthesis-protein	unknown	unknown	gnl\|CDD\|182773
NZ_CP009159.1\|WP_014991282.1\|562931_563279_-\|outer-membrane-protein-assembly-factor-BamE	unknown	unknown	gnl\|CDD\|225465
NZ_CP009159.1\|WP_014991314.1\|565966_567184_+\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|170049
NZ_CP009159.1\|WP_014991279.1\|559230_559557_+\|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226043
NZ_CP009159.1\|WP_014991277.1\|555101_558266_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl\|CDD\|226044
NZ_CP009159.1\|WP_014991315.1\|567526_568855_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718
NZ_CP009159.1\|WP_014991280.1\|560704_561160_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|340027
NZ_CP009159.1\|WP_014991281.1\|561259_562600_-\|NADP-specific-glutamate-dehydrogenase	unknown	unknown	gnl\|CDD\|181834
NZ_CP009159.1\|WP_014991285.1\|564859_565597_+\|peptidoglycan-editing-factor-PgeF	unknown	unknown	gnl\|CDD\|182677
NZ_CP009159.1\|WP_014991274.1\|550711_552043_+\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP009159.1\|WP_014991272.1\|548520_549351_-\|D-alanyl-D-alanine-carboxypeptidase	unknown	unknown	gnl\|CDD\|224600

Protein	Function_ID	Function_description	E-value
NZ_CP009159.1\|WP_014991275.1\|552165_552627_+\|ribonuclease-HI	gnl\|CDD\|178927	PRK00203, rnhA, ribonuclease H; Reviewed.	1.15851e-99
NZ_CP009159.1\|WP_014991317.1\|570092_570308_+\|AlpA-family-phage-regulatory-protein	gnl\|CDD\|225848	COG3311, AlpA, Predicted transcriptional regulator [Transcription].	6.42273e-13
NZ_CP009159.1\|WP_014991271.1\|547701_548460_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	7.98413e-91
NZ_CP009159.1\|WP_014991278.1\|558320_559238_+\|type-II-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	6.75895e-125
NZ_CP009159.1\|WP_014991273.1\|549428_550466_-\|glycosyltransferase-family-9-protein	gnl\|CDD\|223928	COG0859, RfaF, ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane].	2.56031e-67
NZ_CP009159.1\|WP_014991276.1\|553300_554818_+\|amidophosphoribosyltransferase	gnl\|CDD\|236427	PRK09246, PRK09246, amidophosphoribosyltransferase; Provisional.	0
NZ_CP009159.1\|WP_014991283.1\|563349_564351_-\|nucleoid-associated-protein-YejK	gnl\|CDD\|178993	PRK00378, PRK00378, nucleoid-associated protein NdpA; Validated.	0
NZ_CP009159.1\|WP_014991284.1\|564442_564832_+\|RidA-family-protein	gnl\|CDD\|129116	TIGR00004, RutC_family_protein, reactive intermediate/imine deaminase. This protein was described initially as an inhibitor of protein synthesis intiation, then as an endoribonuclease active on single-stranded mRNA, endoribonuclease L-PSP. Members of this family, conserved in all domains of life and often with several members per bacterial genome, appear to catalyze a reaction that minimizes toxic by-products from reactions catalyzed by pyridoxal phosphate-dependent enzymes. [Cellular processes, Other].	1.84032e-61
NZ_CP009159.1\|WP_005623488.1\|552783_553287_+\|colicin-V-biosynthesis-protein	gnl\|CDD\|182773	PRK10845, PRK10845, colicin V production protein; Provisional.	2.99326e-57
NZ_CP009159.1\|WP_014991282.1\|562931_563279_-\|outer-membrane-protein-assembly-factor-BamE	gnl\|CDD\|225465	COG2913, OlmA, Outer membrane lipoprotein OmlA (small protein A) [Cell envelope biogenesis, outer membrane].	3.95057e-36
NZ_CP009159.1\|WP_014991314.1\|565966_567184_+\|tyrosine-type-recombinase/integrase	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	4.09384e-137
NZ_CP009159.1\|WP_014991279.1\|559230_559557_+\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.84102e-52
NZ_CP009159.1\|WP_014991277.1\|555101_558266_+\|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl\|CDD\|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP009159.1\|WP_014991315.1\|567526_568855_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	4.89493e-51
NZ_CP009159.1\|WP_014991280.1\|560704_561160_-\|hypothetical-protein	gnl\|CDD\|340027	pfam17311, DUF5358, Family of unknown function (DUF5358). This family of unknown function is found in Proteobacteria.	2.14509e-08
NZ_CP009159.1\|WP_014991281.1\|561259_562600_-\|NADP-specific-glutamate-dehydrogenase	gnl\|CDD\|181834	PRK09414, PRK09414, NADP-specific glutamate dehydrogenase.	0
NZ_CP009159.1\|WP_014991285.1\|564859_565597_+\|peptidoglycan-editing-factor-PgeF	gnl\|CDD\|182677	PRK10723, PRK10723, polyphenol oxidase.	2.00515e-133
NZ_CP009159.1\|WP_014991274.1\|550711_552043_+\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP009159.1\|WP_014991272.1\|548520_549351_-\|D-alanyl-D-alanine-carboxypeptidase	gnl\|CDD\|224600	COG1686, DacC, D-alanyl-D-alanine carboxypeptidase [Cell envelope biogenesis, outer membrane].	3.41202e-57

>NZ_CP009159.1|WP_014991279.1|559230_559557_+|CRISPR-associated-endonuclease-Cas2
MSENVFMRMIVLFDLPVTTKAKMRAANQFRQFLLKDGYQMLQLSIYTRIIRGRDSMEKHHKRLVEHLPEEGSIRCISITEKQFANMEILVGEKKLQEKKVNSNQLLLF
>NZ_CP009159.1|WP_014991278.1|558320_559238_+|type-II-CRISPR-associated-endonuclease-Cas1
MTWRSILISKGGKLSLQKNQMLIQQEGNEFTVPLEDIAIVVVDSRETVITIPLLSAFGLYGITFLTCDEQFLPCGQWLPFNQYHRQLKTLKLQLEASLPQKKQLWQKIVQQKIRNQATVLKICKFQAESDRLSKMAEQVKSGDKENLEAQSAVIYFQTLFGKGFKRTEDENMVNSALNYGYTVMRSAVARALVLYGWLPQIGLFHRSELNAFNLADDFIEPFRPLVDLLVVQLANDDKLAFNLSPILKQRLIKVLNYQLLFKQEKVNTLTGIERSVSSFQSALTQRNADLLKLPEILPLAEHQYE
>NZ_CP009159.1|WP_014991277.1|555101_558266_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKLTPLNYILGLDLGIASVGWAVVEIDEQENPLGLIDVGVRTFDRAEVPKTGESLALARRLARSARRLVKRRADRIKKAKRLLKAENILLSADEHLPNDVWQLRVKGLDQKLERQEWAAVLLHLLKHRGYLSQRKNESKSENKELGALLSGVETNHQILQSAEYRTPAEIAVKKFHVEDGHIRNQRGAYTHTFSRLDLLAEMELLFQRQTDLGNPHTSAKLLENLTALLMWQKPALAGEAILKMLGKCTFEPTEYKAAKNSYSAERFVWLTKLNNLRILEQGAERALTDNERFALLDQPYEKAKFTYAQARTMLALPDEAIFKGVRYQGEDKKAVETKTILMEMKAYHQIRKALENADLKAEWNELKNNSELLDDIGTAFSLHKTDEDICRYLDGKLSESILNALLENLNFDKFIQLSLKALQQILPLMLQGQRYDEAVSAIYGDHYGKKSAEINRLLPTIPADEIRNPVVLRTLTQARKVINAVVRLYGSPARIHIETGREVGKSYQDRKKLEKQQEDNRKQRESAVKKFKEYFPNFVGEPKGKDILKMRLYELQQAKCLYSGKSLELHRLLEKGYVEVDHALPFSRTWDDSFNNKVLVLANENQNKGNLTPYEWLDGKNNSEHWQNFVARVQTSGFSHTKKQRILSHKLDEKGFIERNLNDTRYVARFLCNFIADNMLLTGKGKRKVFASNGQITALLRGRWGLQKVRDDNDRHHALDAVVVACSTVVMQQKITRFVRYEEGNVFSGERIDRETGEIIPLHFPSPWAFFRENVEIRIFSENPKLELENRLPDYPQYNHEFVQPLFVSRMPTRKMTGQGHMETVKSAKRLDEGLSVLKVPLTQLKLSDLERMVNREREVTLYESLKARLEQFGNDPAKAFAEPFHKKGGAVVKAVRVEQTQKSGVLVRDGNGVADNASMVRVDVFTKGGKYFLVPIYTWQVAKGILPNKAVTANVDEIDWLEMDESYQFIFTMYPNDLVKVKLKKEEFFGYYGGLDRATGAIVIKEHDLEKSKGKQGIYRIGVKLALSFEKYQVDELGKNIRPCRPTKRQHVR
>NZ_CP009159.1|WP_014991276.1|553300_554818_+|amidophosphoribosyltransferase
MCGIVGIIGGSPVNQAIYDGLTLLQHRGQDAAGIVTIDDENRFRLRKANGLVSDVFRQEHMLRLQGNAGIGHVRYPTAGSSSVSEAQPFYVNSPFGLTLVHNGNLTNNAELKERLFKEARRHVNTNSDSESLLNIFAHYLDQYPTAHLTPENIFETVRKTNEVIRGAYACIAMIIGHGMVAFRDPFGIRPLVLGKRVVEGKTEYMFASESVALDIVGFEFVRDVNPGEAVYITFDGELHSAICADNPKLNPCIFEYVYFARPDSVIDGVSVYSARVHMGELLGEKIKREWGRMIDEIDVVIPIPETSNDIAVRIANVLYKPYRQGFVKNRYVARTFIMPGQAQRKSSVRRKLNAISSEFKGKNVLLVDDSIVRGTTSEQIVEMARAAGAKKVYFASAAPEIRYPNVYGIDMPTCEELVAYDRSVEEVAEMIGVDKLIFQDLEALYKAVQAENPTIQHFDASVFTGEYITGDVDKAYLDAIAHARNDKAKAKAAKQATNLEIHNEN
>NZ_CP009159.1|WP_005623488.1|552783_553287_+|colicin-V-biosynthesis-protein
MVDIIIIGLIAFSILVSLWRGFVSEVLSLAGWVVAFFVASNFYPYLSGYLTQVNSVYLQNSEYLRNGIAAAVLFIITLIVCGIISALLSKLVDTTGLSATDRVLGGAFGALRGILIVAAILFFLDTFSSASQTELWKESQLIPHFDFIVKWFFEQLQANSSFLNSTK
>NZ_CP009159.1|WP_014991275.1|552165_552627_+|ribonuclease-HI
MKLVEIFTDGSCLGNPGKGGIGIVLRYNGHEKQVSKGYFQTTNNRMELRAVIEALAMLKEPCQVQLNSDSQYMKDGITKWIFNWKKNNWKTANGKPVKNKDLWIALDQEIQRHKIEWAWVKGHSGHRENEICDELAKAGANNPTLEDVGYNAD
>NZ_CP009159.1|WP_014991274.1|550711_552043_+|argininosuccinate-synthase
MSATILESLPLGQKVGIAFSGGLDTSAALLWMRKKGAVPYAYTANLGQPDEDDYNAIPKKAMEYGAENARLIDCRAQLAREGIAAIQCGAFHISTGGIPYFNTTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPKLKIYKPWLDQLFIDELGGRFEMSQFLIANGFDYKMSVEKAYSTDSNMLGATHEAKDLEELSTGMKIVKPIMGVAFWDESVEIKPETVSVTFEEGVPVALNGKRIEDAVELILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGLRLGRLLYQGRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEKVEDAPFTPADRIGQLTMRNLDIVDTRGKLGIYTETGLLSVQNNVLPQLGKK
>NZ_CP009159.1|WP_014991273.1|549428_550466_-|glycosyltransferase-family-9-protein
MKKILVIRNDKIGDFMVCFPAFAMLKQSMPNVEITALVPSYTAPLAELCPSIDNVIIDTPNKKDKTEFNRVLQAIKNAQFDAVICFVSDWYNAKLTWKSGIKHRLAPATKVFQFLYNQRLTQRRSQSAKAESEYNLDLARAFLQKHHIAVVEPKAPYLQFSEEQIAQQKAKLAKNLQISTACKWLFVHASTGGSATSLSIEQYAQMLNSIASETNCEIVLTAGKGESEKAHQLAAQITATKAVVYDKNDGLQDFACSIACADLFIAGSTGPLHIAGTLNVATIGFYPSRLSALPRRWRPINEEGKHLAFMPPEAKEKAQQMNLGLISISEALKTIVPFVKNLWHS
>NZ_CP009159.1|WP_014991272.1|548520_549351_-|D-alanyl-D-alanine-carboxypeptidase
MFKKFLSVFFLFPTLSIAQSYVVYDFTHDKILESRSANNVQPIASVTKLMTANVFLENNKNKNCSASISDEDFDYIKGTGTKLPKYTPIACSELLKAMLVHSDNYAAHALSRSAGMSRSQFIQKMNQKAQQLGMRSTRFSDSSGLSSANISSAMDLVKLAKYSLNNAKIQELSNTKAAYIRAGKRNVFMQNTSALVREEIFDAAINKTGYIRESGYNLVFINKHQCNNATIGVISLNNNSSAFRSNFTKNKLEQYGCASLAKDDFEYDGYDQEEDI
>NZ_CP009159.1|WP_014991271.1|547701_548460_+|glycosyltransferase-family-2-protein
MSTLSVAMIVKNEAQDLAKCLETVQGWVNEIIVLDSGSSDETVQIAESFGAKVYVNTDWQGFGKQRQLAQQYITSDYVLWLDADERVTPELKQSILQAVEKDEKNTVYQVSRLSEVFGKQIRHSGWYPDYVVRLYRTDFAKYGEELVHEKVHYPKNATVKKLTGDLLHFTYKDIHHYLVKSASYAKAWAIQRANAGKKASLLDGVTHALGCFVKMYLLKAGFLDGKQGFLLAVLSAHSTFVKYADLWNRTRN
>NZ_CP009159.1|WP_014991280.1|560704_561160_-|hypothetical-protein
MRKTLFTLICAALCHTSFANSAENPTAYTEHAKYKISATDMKILVRQLNNIEQCLFPDLAKPNYQQIYDNWSVAESMTMLYFQQNLLKELIGEHNAQLIEKDESSRLYFEQMHEKYNHQKANVDKSRCEEFKPIYAQIKQQIEYSIPQVYK
>NZ_CP009159.1|WP_014991281.1|561259_562600_-|NADP-specific-glutamate-dehydrogenase
MSDLNALFQKIKQRDPNQAPFHQAVEEVFGSLAPFLAKNPQYTQQGILERIVEPERVITFRVTWVDDKGQVQVNRGYRVQMNSAIGPYKGGIRFHPTVDLGVLKFLAFEQVFKNALTTLPMGGGKGGSDFDPKGKSDAEVMRFCQAFMTELSRHIGADTDVPAGDIGVGGREIGYMYGQYKKLRNEFTSVLTGKSLTWGGSLIRPEATGYGAVYFADAMLATKGQGFEGKRVVISGSGNVAQYAAEKAIQKGAKVLTVSDSNGYVLFPDSGMTEKQLADLLVLKNERRERLSVYAQEQGIQYFEGQKPWGVKCDIALPCATQNELDGEAAKELVKNGCFCVAEGANMPTTLEGVEVFIAAKILYAPGKAANAGGVATSGLEMSQNAIRLSWTREEVDQRLFNIMTAIHENCVENGTEADGFVNYVNGANIAGFKKVATAMLEQGIV
>NZ_CP009159.1|WP_014991282.1|562931_563279_-|outer-membrane-protein-assembly-factor-BamE
MKMKSLLAIALLAVGVTSCSTVKKVVYRIDVPQGNYLEQDKIDQVQVGMNKTQVQYLLGTPMLQDVFAQNRWDYVFIKREGYNDPIQHTLFVYFDNQGLVRDIKLDKPIEATKAE
>NZ_CP009159.1|WP_014991283.1|563349_564351_-|nucleoid-associated-protein-YejK
MSINVTEIVLHQIHQTEGETPELNTVLRDNLLAISPEVEQMMLQLHQAYQSKAKAYGIFKNESIFAQQLNRLLEQETDFLPFSHSCAKMLSSELAKYPFASGGTFILCRYNFLATDYLFIALIDSRTSMLVDDQLDIKRTEYLDITQYDIACRINLTELKINAQSNRYLTFIKGRVGRKIADFFMDFLSAEEGFNPQLQNQTLLQAVSDYCDQGELSAPQTREVKKQVFEYCKGQINSGEEIALSELSEALPTLNEVNFAQFTQEQEYGLEENIPPVRNALKTLTKYSGSGKGVTISFNAELLGERLIWDELNDTLTIKGLPANLRDQLERNK
>NZ_CP009159.1|WP_014991284.1|564442_564832_+|RidA-family-protein
MTKVIHTEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPQTGEIPTDITQQARQSLENVKAIIEQAGLSVADIVKTTVFVKDLNDFATVNAEYEAFFRENNHPSFPARSCVEVARLPKDVGLEIEAIAVRK
>NZ_CP009159.1|WP_014991285.1|564859_565597_+|peptidoglycan-editing-factor-PgeF
MKNITPNWHAPEHIRAFTTVRIGGVSQVPFDSFNLGDHVGDNPKDVQQNRQLLVEQFGLPHFPLFLTQTHSTRVIRLPYDGDNLEADAVYTDQPNQVCLVMTADCLPVLFYSKDGKEVAAAHAGWRGLCDGVLENTVAKFACSPAEICAWLGPAIGPTKFQVGKEVIEQFCAFDPQAELAFIADPTTSGKFLGNLYQIARQRLNKLGITEISGGEHCTFTEQERFFSYRRDKQTGRMASLIWRSE
>NZ_CP009159.1|WP_014991314.1|565966_567184_+|tyrosine-type-recombinase/integrase
MARLTKPLTNTEIERAKAKEKEYTLSDGGGLYLLIKSNGAKLWRFNYYKPLTKKRALISFGRYPDISLQQARKQRDECLSLLAVNTDPLEHRQQMEREEQAKLENTLLKIVELWHSKRLDDVKHGEIQAETLRKNRAILDKHILPMLGHLAITEISPRIVVSALEPAKERGLGDTLKRAIRLLNEVLNFSVNADLIEFNKCLKVSDHFSTPKAVNNPTIPPKELPAFLEALRDSNLSLQTKLLIKWQLLTITRPKEACEALWREIDWEAKTWTLPAEKMKMKRPHVIPLSNQSLRILEKMKKITGNSPFIFQSEIKPKQPMNSQTANRAIKLLGYEGRLTAHGLRSIASTYLNEQLVNYDVVEACLAHVIKDQTRKAYNRSDYLDQRVEVMQQWADYVEKCSIGI
>NZ_CP009159.1|WP_014991315.1|567526_568855_+|Fic-family-protein
MKMPKPPAYDELLQAPVNHNDFFNYLAEFKATDEKGRYLAWDKFKRVNPNDSLQKWLAVKMNRKTLQKTLKIGDISFAFCVPDSLQATLHFIDKSTGGSVGVSSLEGLSKQEQGRFLLKSLVMEEAITSAQLEGAVTTRKVAKEMLETARKPRTKDEMMIVNNYYLMQEAIARKDEPLSIELILELHRIATHNAIENKAVAGEFRQDDEIYIADEYGDKIHQPPTHTELNHLMTAFCDFANDEHTGESGNFIHPVIKAIILHFLIGYIHPFGDGNGRTARALFYWYMLKSGYWLFEFISVSRLLKEAPKQYAMSYIDTETDELDMTYFLYYQANIIKRAIADLENYIINKQRDFSNFVSVIADFTAKTKISHRQIQILQKAVKETGYIFTAKEISNEYGISENTARSDLKALLDLNLLGQFKIGNAIGYISPNDLLERLKRA
>NZ_CP009159.1|WP_014991316.1|569048_569924_+|hypothetical-protein
MAKSQDYYNKLPDCSIVDYELIPLPEACLLWCGVSFEDLADEVKLLTNISQSIYKHPYIPCLEKKTRVINRAINEGKLRVVREHGEGGEIITDYLGNIKRDNKGNPLIDHVAYDRRHFWIKDLKAFISENFPNDRPKTIFYDEELKPSVNVEDNLKLQAKINELQITLASEQSKIRDYELAMQSLSHQTQLAKTAQQDAEERLERGRELYRQLQTAYNQLKLPPESNINLDNTLYLLGEVINAVKSKHKQWTQSAIIDEIFTLRQGKSITGLEQRTIEEYFSNANKRLKAK
>NZ_CP009159.1|WP_014991317.1|570092_570308_+|AlpA-family-phage-regulatory-protein
MEHIPSIETNQPQTMATPPKQLLNVQDVRTVTGLSVTTIYKLVKDGAFPQPKKCGRSTRWRLADIQAYINS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009159_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009159_3

987490-987587

Orphan

Consensus_repeat	Method
CCTAACTTCCAATATGGAAGTCAGGGATAAAAATG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009159_3

>merge|NZ_CP009159|3|987490-987587|CRISPRCasFinder
CCTAACTTCCAATATGGAAGTCAGGGATAAAAATGTGGAAGTCAGGGAAAAATCAGCTAAAAGCCTAACTTCCAATATGGAAGTCAGGGATAAAAATG

>NZ_CP009159|3|3|987490-987587|CRISPRCasFinder
CCTAACTTCCAATATGGAAGTCAGGGATAAAAATG	TGGAAGTCAGGGAAAAATCAGCTAAAAG
CCTAACTTCCAATATGGAAGTCAGGGATAAAAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009159.1\|WP_014991660.1\|975353_977201_-\|site-specific-DNA-methyltransferase	unknown	unknown	gnl\|CDD\|225100
NZ_CP009159.1\|WP_025342479.1\|998550_1000098_-\|multicopper-oxidase-family-protein	unknown	unknown	gnl\|CDD\|225043
NZ_CP009159.1\|WP_005607771.1\|982284_983115_+\|ParA-family-protein	unknown	unknown	gnl\|CDD\|224113
NZ_CP009159.1\|WP_039195098.1\|993784_994174_-\|Cu(I)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133383
NZ_CP009159.1\|WP_014991659.1\|972601_975214_-\|DEAD/DEAH-box-helicase-family-protein	unknown	unknown	gnl\|CDD\|226115
NZ_CP009159.1\|WP_012340851.1\|991819_992218_-\|Cd(II)/Pb(II)-responsive-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133411
NZ_CP009159.1\|WP_005607778.1\|986174_986726_+\|DUF2857-domain-containing-protein	unknown	unknown	gnl\|CDD\|378591
NZ_CP009159.1\|WP_039195088.1\|983118_984474_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP009159.1\|WP_039195090.1\|984486_986178_+\|ParB-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|213858
NZ_CP009159.1\|WP_039195096.1\|992288_992903_+\|cation-transporter	unknown	unknown	gnl\|CDD\|224151
NZ_CP009159.1\|WP_014991663.1\|978918_980016_-\|murein-transglycosylase-A	unknown	unknown	gnl\|CDD\|236866
NZ_CP009159.1\|WP_081906445.1\|998284_998461_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	unknown	unknown	gnl\|CDD\|176229
NZ_CP009159.1\|WP_014991664.1\|980329_981883_+\|exodeoxyribonuclease-VII-large-subunit	unknown	unknown	gnl\|CDD\|234714
NZ_CP009159.1\|WP_005620769.1\|988999_989467_+\|DUF3158-family-protein	unknown	unknown	gnl\|CDD\|314329
NZ_CP009159.1\|WP_039195731.1\|995767_997843_+\|copper-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319783
NZ_CP009159.1\|WP_039195099.1\|994581_995343_+\|DUF305-domain-containing-protein	unknown	unknown	gnl\|CDD\|367619
NZ_CP009159.1\|WP_005607789.1\|989769_990204_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|136097
NZ_CP009159.1\|WP_014991661.1\|977410_978373_+\|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB	unknown	unknown	gnl\|CDD\|237898
NZ_CP009159.1\|WP_039195094.1\|988225_988984_+\|TIGR03761-family-integrating-conjugative-element-protein	unknown	unknown	gnl\|CDD\|274771
NZ_CP009159.1\|WP_014991662.1\|978518_978854_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009159.1\|WP_014991660.1\|975353_977201_-\|site-specific-DNA-methyltransferase	gnl\|CDD\|225100	COG2189, COG2189, Adenine specific DNA methylase Mod [DNA replication, recombination, and repair].	5.41855e-35
NZ_CP009159.1\|WP_025342479.1\|998550_1000098_-\|multicopper-oxidase-family-protein	gnl\|CDD\|225043	COG2132, SufI, Putative multicopper oxidases [Secondary metabolites biosynthesis, transport, and catabolism].	3.62191e-118
NZ_CP009159.1\|WP_005607771.1\|982284_983115_+\|ParA-family-protein	gnl\|CDD\|224113	COG1192, Soj, ATPases involved in chromosome partitioning [Cell division and chromosome partitioning].	1.10554e-31
NZ_CP009159.1\|WP_039195098.1\|993784_994174_-\|Cu(I)-responsive-transcriptional-regulator	gnl\|CDD\|133383	cd01108, HTH_CueR, Helix-Turn-Helix DNA binding domain of CueR-like transcription regulators. Helix-turn-helix (HTH) transcription regulators CueR and ActP, copper efflux regulators. In Bacillus subtilis, copper induced CueR regulates the copZA operon, preventing copper toxicity. In Rhizobium leguminosarum, ActP controls copper homeostasis; it detects cytoplasmic copper stress and activates transcription in response to increasing copper concentrations. These proteins are comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain winged HTH motifs that mediate DNA binding, while the C-terminal domains have two conserved cysteines that define a monovalent copper ion binding site. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	3.57929e-71
NZ_CP009159.1\|WP_014991659.1\|972601_975214_-\|DEAD/DEAH-box-helicase-family-protein	gnl\|CDD\|226115	COG3587, COG3587, Restriction endonuclease [Defense mechanisms].	3.2836e-135
NZ_CP009159.1\|WP_012340851.1\|991819_992218_-\|Cd(II)/Pb(II)-responsive-transcriptional-regulator	gnl\|CDD\|133411	cd04784, HTH_CadR-PbrR, Helix-Turn-Helix DNA binding domain of the CadR and PbrR transcription regulators. Helix-turn-helix (HTH) CadR and PbrR transcription regulators including Pseudomonas aeruginosa CadR and Ralstonia metallidurans PbrR that regulate expression of the cadmium and lead resistance operons, respectively. These proteins are comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their conserved N-terminal domains contain predicted winged HTH motifs that mediate DNA binding, while the C-terminal domains have three conserved cysteines which form a putative metal binding site. Some members in this group have a histidine-rich C-terminal extension. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements.	2.55412e-55
NZ_CP009159.1\|WP_005607778.1\|986174_986726_+\|DUF2857-domain-containing-protein	gnl\|CDD\|378591	pfam11198, DUF2857, Protein of unknown function (DUF2857). This is a bacterial family of uncharacterized proteins.	2.79832e-66
NZ_CP009159.1\|WP_039195088.1\|983118_984474_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP009159.1\|WP_039195090.1\|984486_986178_+\|ParB-N-terminal-domain-containing-protein	gnl\|CDD\|213858	TIGR03764, ICE_PFGI_1_parB, integrating conjugative element, PFGI_1 class, ParB family protein. Members of this protein family carry the ParB-type nuclease domain and are found in integrating conjugative elements (ICE) in the same class as PFGI-1 of Pseudomonas fluorescens Pf-5.	5.46783e-125
NZ_CP009159.1\|WP_039195096.1\|992288_992903_+\|cation-transporter	gnl\|CDD\|224151	COG1230, CzcD, Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism].	4.40134e-59
NZ_CP009159.1\|WP_014991663.1\|978918_980016_-\|murein-transglycosylase-A	gnl\|CDD\|236866	PRK11162, mltA, murein transglycosylase A; Provisional.	0
NZ_CP009159.1\|WP_081906445.1\|998284_998461_+\|alcohol-dehydrogenase-catalytic-domain-containing-protein	gnl\|CDD\|176229	cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	8.75855e-17
NZ_CP009159.1\|WP_014991664.1\|980329_981883_+\|exodeoxyribonuclease-VII-large-subunit	gnl\|CDD\|234714	PRK00286, xseA, exodeoxyribonuclease VII large subunit; Reviewed.	0
NZ_CP009159.1\|WP_005620769.1\|988999_989467_+\|DUF3158-family-protein	gnl\|CDD\|314329	pfam11358, DUF3158, Protein of unknown function (DUF3158). Some members in this family of proteins are annotated as integrase regulator R however this cannot be confirmed. This family of proteins with unknown function appear to be restricted to Proteobacteria.	7.68395e-48
NZ_CP009159.1\|WP_039195731.1\|995767_997843_+\|copper-translocating-P-type-ATPase	gnl\|CDD\|319783	cd02094, P-type_ATPase_Cu-like, P-type heavy metal-transporting ATPase, similar to human copper-transporting ATPases, ATP7A and ATP7B. The mammalian copper-transporting P-type ATPases, ATP7A and ATP7B are key molecules required for the regulation and maintenance of copper homeostasis. Menkes and Wilson diseases are caused by mutation in ATP7A and ATP7B respectively. This subfamily includes other copper-transporting ATPases such as: Bacillus subtilis CopA , Archeaoglobus fulgidus CopA, and Saccharomyces cerevisiae Ccc2p. This subclass of P-type ATPase is also referred to as CPx-type ATPases because their amino acid sequences contain a characteristic CPC or CPH motif associated with a stretch of hydrophobic amino acids and N-terminal ion-binding sequences. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP009159.1\|WP_039195099.1\|994581_995343_+\|DUF305-domain-containing-protein	gnl\|CDD\|367619	pfam03713, DUF305, Domain of unknown function (DUF305). Domain found in small family of bacterial secreted proteins with no known function. Also found in Paramecium bursaria chlorella virus 1. This domain is short and found in one or two copies. The domain has a conserved HH motif that may be functionally important. This domain belongs to the ferritin superfamily. It contains two sequence similar repeats each of which is composed of two alpha helices.	4.30783e-40
NZ_CP009159.1\|WP_005607789.1\|989769_990204_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|136097	PRK06863, PRK06863, single-stranded DNA-binding protein; Provisional.	6.78008e-87
NZ_CP009159.1\|WP_014991661.1\|977410_978373_+\|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB	gnl\|CDD\|237898	PRK15068, PRK15068, tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB.	0
NZ_CP009159.1\|WP_039195094.1\|988225_988984_+\|TIGR03761-family-integrating-conjugative-element-protein	gnl\|CDD\|274771	TIGR03761, ICE_PFL4669, integrating conjugative element protein, PFL_4669 family. Members of this protein family, such as PFL4669, are found in integrating conjugative elements (ICE) of the PFGI-1 class as in Pseudomonas fluorescens.	4.42873e-96

>NZ_CP009159.1|WP_005607778.1|986174_986726_+|DUF2857-domain-containing-protein
MIKQTTINEALLANVLLNLREGNVRSCLNLGFSEDELKAINQLTLDELFYIGHSTVQFAKVEINHDAFWKLLAVAQENAEEQQVIDRALLLGASIEMLNQYFGLSTSAVSARRQLLGKEEKMGRKAAATDEEQELIWNLWKKYQATIENLHSLEGLELLSLIAEESNINLTVVWKLVCEWQSN
>NZ_CP009159.1|WP_039195090.1|984486_986178_+|ParB-N-terminal-domain-containing-protein
MTKNEKRAAAIARNLNVSPIANISPSYSTVTPNHYSSEVEYITVTLDKLRPYEHNPRKTRNPNFEMIKESIRRRGLDHKPNITRRPGEDFYIIADGGNTRIQALKELFTETKDPKFWSISCEYKPWQGDSADSVEAELNILIGHLIENDTRADLSFIEKALGILQAKEYYEKKLGKSLSSRELSTELEKDGYIIHYTLIAKMERCVTHLYPHIPDVLFKGLGHTQIDKLLAIRNNADEVWHHYHLEMDTSFNNVWASSLSSCNEDSPFQVRDFQDKLITQMADLLEGKTSYESLYLEIDLDERKFKKIAAKQHEIENNVEHSLEQITQHQETVKTKPIATSTSKPSDKNSLIKEDSALIPTTPSSSEGNEDIESSGELTSNVMDFFNNAQTSIVNTSENTETELLTQISQDFGLTPGMSIQEQREKRAAENGLSFACCGRQPVEDIWQIYPARNYRSEAYSLALDIAETANINELVEHVVKNPVDYSYRMKPNDSSLSDYASFIYQLLSMLQTHDFSQSVHCNLNSHFLFDIQQSGTGIDDITLVKIFRLIRVVRHLRQGAQP
>NZ_CP009159.1|WP_039195088.1|983118_984474_+|replicative-DNA-helicase
MSHKQPIELYSVDAESSVLGGLILDNSLFDEIVDVIIPNDFYLHAHQIIFKGIFSLLSNAKPVDILTLEQYFKEQGILEQLGGLAYIAQLVKITPTTANFKAYIDIVVLYSKHRKLLRLGQNIISEIQVAKSAEKLDELLENIERQFTDLTLSQQTEGVIDLNETLKKVVLRMESSAQNADPVTGTPTGIQELDEVTTGGQAGDFIVIGARPSMGKTAFCQTIAYHTLEKFKDLPIQFYSMEMPAEQILQRFLAMRARVSLQAIRKADQLGEDEWAKISLAMGHILDEWKNRLLIDDEGGLTPQKLRSKVRYNIRKYGKPAAIFIDYLQLMQGSRRYENRHLEITAISQALKNLAKEVDCPVYALSQLNRSLEQRANKRPMNADLRESGSLEQDADLILFIYRDEVYNEQTEHPGTAEIIIGKQRNGPLKTVFTRFIGEYSLFENLAVTQY
>NZ_CP009159.1|WP_005607771.1|982284_983115_+|ParA-family-protein
MNLLQNASNKPFVITVASTKGGSAKSTNAANIGAFCAEHGLKTLLIDTDTQPTLSSYYALDYQAPGGTYEFLHFRDVEPSHIISKTQIPNLDLIQSNDPSNKISPMLRDSPDGALRFSLLLSKIDGYDVVIVDTRGTRDITVDMSVLAADVLFCPILPHILSAKEFIRGTIGMYQDLQTFANFGFTLPPLKAVINCVDHTNDVKFVSEHLHTLFATEFDASKTLLDFTVPDKVAYREAATFSIPVYKQNRAEYKTIQQLCSLLMPQFAQSHFMGKE
>NZ_CP009159.1|WP_014991664.1|980329_981883_+|exodeoxyribonuclease-VII-large-subunit
MYLQKTNENLPLAPYLLLPVNFPKILGNFLDMNNILTITQLNYSVRNLLEMELGQVWLTGEISNFSQPVSGHWYLTLKDENAQVRGAMFRMKNQRVTFRPQNGMQVLVRASVSLYEPRGDYQIIIESMQPAGDGLLQQQFEQLKMKLAAEGLFAQEKKKAIPPFAKRVGIITSSSGAALQDILNILKRRDPSLAIIIYPTLVQGKEATQDIVNTIDLANRRCECDVLIVGRGGGSLEDLWCFNEESVAHAIFRSDIPIISAVGHETDVTIADFVADLRAPTPSAAAELVSRDQQELVRQLQHQFDKLSLAFDRLWAEKQASFERLKLRLNAQHPARQVQIQQQQLAQFSYRLENAIHKTYLTEKQKLEQLLLRLTNQHPQRQLQQQQIQLKQAKYRLVQAIEQTLIRKQHQWKHIAEQVKRNPLPYYVEKKNQQYVQLAQRLQFAIEKKLTKEQQAFQELCTKIDGLSPLKILARGYSVTQTSQGEILRSTQNLEVGTQITTKLSQGEIVSEIIKIN
>NZ_CP009159.1|WP_014991663.1|978918_980016_-|murein-transglycosylase-A
MNWKAYKKWAKVTAIALLVASCSSDNANKGQHDYQAEHAKFGAVYKGRQYIPHNFVSTPRVAANGSIVNFQDFLKQLNNVRAYAGGITGRYAGTYGKVSSWIASGGKVSDLARYNIHALQMRGEDGFQNVLMTGYYSPVIHARRTPQGKYQHPIYAMPSQKRFTRSQIYDGALEGKGLELAYSDSMLDNFLLGVQGSGYVDFGDGRLNYFAYAGQNGFKYASVGRLLVEDGEIPKEKMSIQAIREWGERNPHRVQGLLERNPSYVFFKNDPTGQVKGSAGVPLVALASVASDKSLVPSGSVLLVETPLIDRAGNWTGKHELRLMVALDVGGAVKGHHFDLYQGIGDEAGHKAGLMKHYGRVWVLN
>NZ_CP009159.1|WP_014991662.1|978518_978854_+|hypothetical-protein
MSNPFTVAWSRKQQVMCLGHWIIHYNGRELTLPKDRQDKDMGTKGIYNYMDPDDELYLEGLDEDDWIVENIEWLSDWFIEQDVPLEENIIRYFYQAVNKEDWRCGSCGGCI
>NZ_CP009159.1|WP_014991661.1|977410_978373_+|tRNA-5-methoxyuridine(34)/uridine-5-oxyacetic-acid(34)-synthase-CmoB
MIDFRPFYQQIATTNLSAWLETLPLQLKQWEKTTHGDYAKWAKIVDFMPNSTACINLKDKVESIPNAPLSVGETKQLTHHLKQLMPWRKGPYHLHGIHIDTEWRSDFKWDRVLPHLAPLKDRTILDVGCGSGYHMWRMVGEGAKMVVGIDPTELFLCQFEVVRKLLGNDRRAHLIPLGIEQMQPLAAFDTVFSMGVLYHRKSPLDHLSQLKAQLVKGGELVLETLVIDGDVNTCLVPADRYAKMKNVYFIPSVDCLINWLEKVGFKNVRCVDQAITTLEEQRKTEWLENESLVDFLDPNDHSKTIEGYPAPKRAVILANT
>NZ_CP009159.1|WP_014991660.1|975353_977201_-|site-specific-DNA-methyltransferase
MPEIFSEGKIDFDKFQQLFSDNISTEPDRYHLNWAGKSQAYQQLQIPTQKTLTPCVEESVDFEQTQNIFIEGENLEVLKALQKSYFNSIKMIYIDPPYNTGNDFVYNDNFAQSQTDYQAQTGEIGEDGFLKKAFRKNAKENGHFHSNWLNMMLPRLHLARNLLKDDGVIFISIDDNEQAQLKLLCDEVFGEENFVAELIWDKQHSQQQGLFKTYHEYVLLYAKNINNHKNIKGGTGVIDAGAIKKISKSNPESEFTFPAGVKFEAKDGVELKGTFGDSEKVTVVKGCFRAINGRTLEEVTLSAGWTQKKQMTEFFAGNEVYDTKGQKVIEFYFSSTGKLKCRKERTSITPPTLLPKYGMSSLHTDNLKELMNATVFNNPKPLPMLSDFIRWFTGGTDIILDFFSGSGSTAHAILETNLAEGKKNTFISVQLAESLNVDNEDQKEAVEFCLNLGVPATIAEISKERIRRAGSQILQKNEENRPLDVGFKVFKLTDSHFKQWQSPTAENLAEQLEMFIDNVKENTEPQVMLYEILLRLGLKLTCNVRYENNIFWIEDEKSQHYAILLEHIDENLLNSVINVQPQKVVALDRLFAGNDALKKNAELQMKDANIAFFVI
>NZ_CP009159.1|WP_014991659.1|972601_975214_-|DEAD/DEAH-box-helicase-family-protein
MKLQFETLDYQQQAVRSVLNLFVGQPNQQTNDLQLAHHSQFCPNAELVADLPLTENLANQQNAQNIKYKTTLSDHGLNFTVEMETGTGKTYVYLRTIFELNREYGWQKFVIVVPSVAIREGVLHTLKTTRQHFATLFDNVSVNQKFEYKSNQLSRLKQFAENHNIEILVINIDSFAKDSNIINTMNESGVALISYIQQARPIVIIDEPQNMETEIRRKAIDSLNPLFTLRYSATHKNAYHPIFSFNPVQAYEQGYVKQIEVDSVLAENEVNGAYVALKELKTTAKSWSAKVEILFNDKKAMKKKVVTIKPNQDLFELSNQNEMYRSGYILSGMDFDAQMIEFNSGMQVFAGANNSALKDDLQKMQIRRTIEEHLQKEKKFRPLGVKVLSLFFIDKVDNYRNGGKFYQWFEEIYQELVNESPEGVHDGYFSKDKKGVVKDTSGTTQADNDTYQLIMKNKEGLLSLDNPLRFIFSHSALREGWDNPNVFQICTLNDTASELKKRQEIGRGLRLPVDQNGVRLQDKSKNILTVIANESYEEFASKLQREIEEDCGVTFEKSQIKNKAERKVVRYRKDFSQHPEFQTLWERIKYKTTYRVAFAQADLIENAIAKIAKMQRVEAVKIQHTKVKLRFDETGVQTDLRGEGSDITKVEWAIPDVLNMLQKKTGLTRETLCNILQKSDRLQEIFANPQRFIDLVAEKINFALQEIMAEGVQYRRIAGKTYEMTLFEDFEFYPNQFTFKVNEQEKTIHEEYISLDSNTETSFARDCENSEQVEFYFKLPKKFKIPTPLGNYNPDWAVVFKGQNKIYFVAETKNTGKGIQAGVDESLLDQSEQMKIAYARKNFNYLQQDFNDLKYEVVESVREISGRYSR
>NZ_CP009159.1|WP_039195094.1|988225_988984_+|TIGR03761-family-integrating-conjugative-element-protein
MTTTPESQLGPLRSEIKFTLHTQYAHKLWTGRNSTKDENGKITQSSILSMPNALKLIGLIQQDAAQDDPYADDYLLRFEEKVLTYRQEMQQLVDKLVGIYADRLPESIEFERCTNVSPISYPIYVNSQLGYQLLYLLGDFDNLARVTMTAAHIALLTRSDAQEWLEAGAVLIRRCFGVIENYKHSGITRKDAQENNARYQAAIKRMGYEVPDYVITGERRADYAPFIRHNSLLGDENEQAVESHVTASTKQE
>NZ_CP009159.1|WP_005620769.1|988999_989467_+|DUF3158-family-protein
MGLISEDMYRELAKKADVNNVLKQLFSHLETEADYQILFEQVHQARTAFMDYQLEMVQRVRASELQHLPIFMIKDKSSSSGGTFLRWRSMHHTGTGETVWQPLLTDSHVPESLRNQLVAVEKDRILVNMQISIFNYILRQLSECASKIEKVENAL
>NZ_CP009159.1|WP_005607789.1|989769_990204_+|single-stranded-DNA-binding-protein
MAGINKVIIVGHLGNEPEMRTMPNGEAVANISVATSESWTDKTTGERREVTEWHRIVFYRRQAEVVGQYLHKGSQVYVEGRLRTRKWQDQNGQDRYTTEIQGDILQMLGGRNNGTSPAPTQNQPTNAVNQTEPPINNFDDDIPF
>NZ_CP009159.1|WP_012340851.1|991819_992218_-|Cd(II)/Pb(II)-responsive-transcriptional-regulator
MSKFFKIKQASEQTGVHLETIRYYEKQGLIAPTHQQNGYRVFDENQLEQLRFIKTCRNIGFSLSNIKTLLQLQQTPNKQCNEINALAEQHLAYLDEQITELQQVKTFLMQFVGCENKTVDKCQIIQGIKEKE
>NZ_CP009159.1|WP_039195096.1|992288_992903_+|cation-transporter
MACQNCCGSNQPIHQSPKYKKALWIVLILNLSMFFVEIVMGVKSGSTSLLSDSLDFLGDSANYLISLIVLPMALSYRAKASMVKGLTMGGFGLFILMTTIYRVFYGEMPSYSEMSIVGFLALLVNVSALLILLKFRDGDSNVRSVWVCSRNDAIGNVAVILAGMAVYFFQSKYPDLIVAFVLAFLALQASQEIIKRAWAELKVS
>NZ_CP009159.1|WP_039195098.1|993784_994174_-|Cu(I)-responsive-transcriptional-regulator
MNIGQASKSTQLSVKQIRDYEKAGLLINPSRSEAGYRIYNSNDIARLKFIAKARSVGFSLAQIGELLALQDNPHRTSAQVKTITASHIDFLSNKIKELKSMQHTLQAWSDACGGDDNPDCPILKGLGDF
>NZ_CP009159.1|WP_039195099.1|994581_995343_+|DUF305-domain-containing-protein
MTFIKNRAVHLVAAAVVLATSTAFADGKNEVPTHSMACDNNYTQTTHDCPNNQNGHAAVNHANMNHAHMNHSAMAMDTQNAPPHTQAYLAMMNKMGDEMSKAGNLADADTAFAKGMIPHHIGAVEMAKVQLEFGKDETMRKLAQAIIDGQQSEIDLMNAWLAGKDTATQNPQAPHAKAYAAGKAHHEAMMAAINEPNPDVAFAKGMIPHHQGAVEMAKVQLQFGKDEKMKKLAQDIIKAQEPEIKLMQDWLKQ
>NZ_CP009159.1|WP_039195731.1|995767_997843_+|copper-translocating-P-type-ATPase
MHPEIRQDRPGNCPLCGMALEPLMPELDDDNPELRDFSRRFWYTLPLTAAVLVLAMFGERLNLMDMAAQSWVELVLSLPIVLWAGLPFFSRGWQSLANRSPNMWTLIALGTSAAFVYSVVATAAPGIFPASFVSMGRVGVYFEAAAVIISLTLLGQMLELKARSQTSAAIKTLLGLAPKTARRIGPGGAEEDVPLSHIHIGDLLRVRPGEKVPVDGVVVEGASSVDESMLTGEPLPVRKATGDKVIGATLNTGGALVIRSERIGSETVLSQIVQMVAQAQRSKAPMQRMADGVAGYFVLAVVAVAVATFFVWGVFGPQPSWVFGLINAVAVLIIACPCALGLATPMSVMVATGRGAGRGILFRDAAAIENLRRVDTLVIDKTGTLTEGRPAFDRAVAAAGFSAEEVLRLAASLDQGSEHPLADAIVQAARAQQLKLSKPEQFDSGSGIGVSGVVEGRALALGNTAFMQQNGLSVEPLIEQAESLRSEGASVIYLAADGHLAGLLAVSDPVKDSTPEALASLKAAGLRIIMATGDGLTTANAVGAKLGIDEVHGEVKPADKLALIERLQNEGRVVAMAGDGINDAPALAKADVGIAMGTGTDVAMSSAQITLVKGDLRGIATARKLSEATVRNMKENLLFAFLYNGLGVPVAAGVLYPFTGWLLSPMIAALAMSLSSASVVGNALRLRKSKL
>NZ_CP009159.1|WP_081906445.1|998284_998461_+|alcohol-dehydrogenase-catalytic-domain-containing-protein
MQIQMHALGLNRAEMMYREGAYVIDSVFPATLGYVGAGVVVAVGDDAGEFQIGDKVNV
>NZ_CP009159.1|WP_025342479.1|998550_1000098_-|multicopper-oxidase-family-protein
MKRRDFLRYGIGISLASSSLYSLANMMNHAQHGNMAMMHSVPTGLMPTEAMPSGLSLNGILPKLANQSTQAGLFKATLKAEPIKIRLADNKETEFWAYNGQLPGPQIEVFEGDTVEIEFINHLPQPSTVHWHGLDVPNEADGNPMDMVEPQGKKVYRFTLPQGSAGTYWYHPHPHDHVSEQVYKGLAGTFVVKAKNDPLAHLPEQHWVISDLRLNADGTIPANTMLDWMNGREGEFVLINGQYQPQIQVKTNERIRLWNATSARYFRLNIPGVKWIVVGTEGGLLEKPRSPVDELLLTPAERVEVIMVGETQGTVNLQSGYYDRRKMMVQEQPKDLTLATIQVKSEPVQLPESLRSLPNWDEPKQVRQIRFSEKMMNHTNMPMMNHGTHHATTTLTDNPIPPMMNGMFLINGQTFDMNRIDFVTKLNEVEQWEIFNESHMDHPFHLHGTQFEVIQHTLNGKTFKPEGRALKDVVNLRPYEKVIIRFKQGHTGLKMYHCHILEHENLGMMGMFKVE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP009159_2	2.7\|560053\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560053-560082	30	NZ_CP009159.1	823029-823058	0	1.0

1. spacer 2.7|560053|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to position: 823029-823058, mismatch: 0, identity: 1.0

ttcgtttaccgcatcatagttaaagccttc	CRISPR spacer
ttcgtttaccgcatcatagttaaagccttc	Protospacer
******************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009159_2	2.4\|559855\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559855-559884	30	NZ_CP007001	Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP2, complete sequence	6244-6273	0	1.0
NZ_CP009159_2	2.11\|560317\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560317-560346	30	NC_028766	Mannheimia phage vB_MhM_3927AP2, complete genome	23285-23314	1	0.967
NZ_CP009159_2	2.14\|560515\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560515-560544	30	MT448617	Vibrio phage River4, complete genome	78715-78744	4	0.867
NZ_CP009159_1	1.1\|484360\|27\|NZ_CP009159\|CRISPRCasFinder	484360-484386	27	NZ_CP049813	Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence	98012-98038	6	0.778
NZ_CP009159_2	2.1\|559657\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	559657-559686	30	NZ_CP020079	Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence	186225-186254	6	0.8
NZ_CP009159_2	2.1\|559657\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	559657-559686	30	NZ_CP013487	Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence	249654-249683	6	0.8
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	NZ_CP032119	Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.4, complete sequence	3774-3803	6	0.8
NZ_CP009159_2	2.7\|560053\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560053-560082	30	MT074463	Salmonella phage gmork, complete genome	100913-100942	6	0.8
NZ_CP009159_2	2.7\|560053\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560053-560082	30	MH370386	Salmonella phage S147, complete genome	86674-86703	6	0.8
NZ_CP009159_2	2.7\|560053\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560053-560082	30	MT074456	Salmonella phage polluks, complete genome	100262-100291	6	0.8
NZ_CP009159_2	2.7\|560053\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560053-560082	30	MT004791	Salmonella phage vB_SenS-3, complete genome	20451-20480	6	0.8
NZ_CP009159_2	2.1\|559657\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	559657-559686	30	MN855811	Bacteriophage sp. isolate 126, partial genome	905-934	7	0.767
NZ_CP009159_2	2.10\|560251\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560251-560280	30	NC_014617	Bacillus sp. JAMB750 plasmid pJAM1 DNA, complete sequence	3780-3809	7	0.767
NZ_CP009159_2	2.15\|560581\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	560581-560610	30	MT939487	Erwinia phage pEa_SNUABM_47, complete genome	39394-39423	7	0.767
NZ_CP009159_2	2.15\|560581\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	560581-560610	30	NC_041917	Serratia phage BF, complete genome	39756-39785	7	0.767
NZ_CP009159_2	2.15\|560581\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	560581-560610	30	MT939488	Erwinia phage pEa_SNUABM_50, complete genome	39261-39290	7	0.767
NZ_CP009159_2	2.1\|559657\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	559657-559686	30	NC_019699	Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence	117247-117276	8	0.733
NZ_CP009159_2	2.1\|559657\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	559657-559686	30	NC_014389	Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence	19448-19477	8	0.733
NZ_CP009159_2	2.3\|559789\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	559789-559818	30	NZ_CP050089	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence	17036-17065	8	0.733
NZ_CP009159_2	2.8\|560119\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560119-560148	30	MN855824	Bacteriophage sp. isolate 165, complete genome	11952-11981	8	0.733
NZ_CP009159_2	2.8\|560119\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560119-560148	30	MK605246	Nodularia phage vB_NspS-kac68v162, complete genome	120600-120629	8	0.733
NZ_CP009159_2	2.8\|560119\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560119-560148	30	KU230356	Bacteriophage vB_NpeS-2AV2, complete genome	115408-115437	8	0.733
NZ_CP009159_2	2.8\|560119\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560119-560148	30	NC_048757	Nodularia phage vB_NspS-kac68v161, complete genome	121991-122020	8	0.733
NZ_CP009159_2	2.15\|560581\|30\|NZ_CP009159\|CRISPRCasFinder,CRT	560581-560610	30	MT939486	Erwinia phage pEa_SNUABM_12, complete genome	39796-39825	8	0.733
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	MN871480	UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome	69756-69785	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	MT133560	Pseudomonas phage fnug, complete genome	214094-214123	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	DI373487	KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof	93839-93868	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	MN871489	UNVERIFIED: Pseudomonas phage PaZh_1, complete genome	101620-101649	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	NC_042081	Pseudomonas phage SL2, complete genome	72277-72306	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	KU521356	Pseudomonas phage KTN4, complete genome	214646-214675	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	MW057919	Pseudomonas phage vB_PaeM_kmuB, complete genome	213389-213418	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	NC_042060	Pseudomonas phage PA7, partial genome	93839-93868	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	AP019418	Pseudomonas phage PA02 DNA, nearly complete genome	11251-11280	9	0.7
NZ_CP009159_2	2.5\|559921\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	559921-559950	30	NC_004629	Pseudomonas phage phiKZ, complete genome	214699-214728	9	0.7
NZ_CP009159_2	2.8\|560119\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560119-560148	30	NZ_CP050441	Tolypothrix sp. PCC 7910 plasmid unnamed1, complete sequence	10951-10980	9	0.7
NZ_CP009159_2	2.14\|560515\|30\|NZ_CP009159\|CRISPRCasFinder,CRT,PILER-CR	560515-560544	30	NZ_KY000060	Agrobacterium tumefaciens strain CFBP2407 plasmid pTi_CFBP2407, complete sequence	12074-12103	9	0.7

1. spacer 2.4|559855|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007001 (Campylobacter fetus subsp. venerealis cfvi03/293 plasmid pCfviMP2, complete sequence) position: , mismatch: 0, identity: 1.0

tataaccgataaattgccaatcatcggtaa	CRISPR spacer
tataaccgataaattgccaatcatcggtaa	Protospacer
******************************

2. spacer 2.11|560317|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NC_028766 (Mannheimia phage vB_MhM_3927AP2, complete genome) position: , mismatch: 1, identity: 0.967

ctttcgctctcgctttggctcgccccattt	CRISPR spacer
ctttcgctctcgctttggctcaccccattt	Protospacer
*********************.********

3. spacer 2.14|560515|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MT448617 (Vibrio phage River4, complete genome) position: , mismatch: 4, identity: 0.867

taggacggagcttataccttcgtaaagcaa	CRISPR spacer
atgggcggagcttatacctccgtaaagcaa	Protospacer
  **.**************.**********

4. spacer 1.1|484360|27|NZ_CP009159|CRISPRCasFinder matches to NZ_CP049813 (Monaibacterium sp. ALG8 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.778

ctcgattgaaatctgtggcggtaggtt	CRISPR spacer
gcggatcgaaatctgtggcggtgggtg	Protospacer
 . ***.***************.***

5. spacer 2.1|559657|30|NZ_CP009159|CRISPRCasFinder,CRT matches to NZ_CP020079 (Vibrio campbellii strain 20130629003S01 plasmid pVCGX2, complete sequence) position: , mismatch: 6, identity: 0.8

cctaagaatg----ttgttatcaatattgattca	CRISPR spacer
----agaatagattttgttatcgatattgattca	Protospacer
    *****.    ********.***********

6. spacer 2.1|559657|30|NZ_CP009159|CRISPRCasFinder,CRT matches to NZ_CP013487 (Vibrio alginolyticus strain ATCC 33787 plasmid pMBL287, complete sequence) position: , mismatch: 6, identity: 0.8

cctaagaatg----ttgttatcaatattgattca	CRISPR spacer
----agaatagattttgttatcgatattgattca	Protospacer
    *****.    ********.***********

7. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP032119 (Acinetobacter lwoffii strain ED45-23 plasmid pALWED2.4, complete sequence) position: , mismatch: 6, identity: 0.8

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
gtaccttgagagtatttattcatttctgga	Protospacer
. * * ****** ************.****

8. spacer 2.7|560053|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MT074463 (Salmonella phage gmork, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttta---ccgcatcatagttaaagccttc	CRISPR spacer
---acttaaatccgcagcatagttaaagccttc	Protospacer
   ..***   ***** ****************

9. spacer 2.7|560053|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MH370386 (Salmonella phage S147, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttta---ccgcatcatagttaaagccttc	CRISPR spacer
---acttaaatccgcagcatagttaaagccttc	Protospacer
   ..***   ***** ****************

10. spacer 2.7|560053|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MT074456 (Salmonella phage polluks, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttta---ccgcatcatagttaaagccttc	CRISPR spacer
---acttaaatccgcagcatagttaaagccttc	Protospacer
   ..***   ***** ****************

11. spacer 2.7|560053|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MT004791 (Salmonella phage vB_SenS-3, complete genome) position: , mismatch: 6, identity: 0.8

ttcgttta---ccgcatcatagttaaagccttc	CRISPR spacer
---acttaaatccgcagcatagttaaagccttc	Protospacer
   ..***   ***** ****************

12. spacer 2.1|559657|30|NZ_CP009159|CRISPRCasFinder,CRT matches to MN855811 (Bacteriophage sp. isolate 126, partial genome) position: , mismatch: 7, identity: 0.767

cctaagaatgttgttatcaatattgattca	CRISPR spacer
ctcaagaatgttgttatccatatggatgag	Protospacer
*..*************** **** ***  .

13. spacer 2.10|560251|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NC_014617 (Bacillus sp. JAMB750 plasmid pJAM1 DNA, complete sequence) position: , mismatch: 7, identity: 0.767

tacaccgtttgagcaagaagtgccctgatt	CRISPR spacer
gccatagtttgagaaagaagtgccctgtta	Protospacer
  **. ******* ************* *

14. spacer 2.15|560581|30|NZ_CP009159|CRISPRCasFinder,CRT matches to MT939487 (Erwinia phage pEa_SNUABM_47, complete genome) position: , mismatch: 7, identity: 0.767

gcagtgaatgaagtgatgtaagcatataaa	CRISPR spacer
tcgttcaataaagtgatataagcatataat	Protospacer
 *. * ***.*******.***********

15. spacer 2.15|560581|30|NZ_CP009159|CRISPRCasFinder,CRT matches to NC_041917 (Serratia phage BF, complete genome) position: , mismatch: 7, identity: 0.767

gcagtgaatgaagtgatgtaagcatataaa	CRISPR spacer
tcgttcaataaagtgatataagcatataat	Protospacer
 *. * ***.*******.***********

16. spacer 2.15|560581|30|NZ_CP009159|CRISPRCasFinder,CRT matches to MT939488 (Erwinia phage pEa_SNUABM_50, complete genome) position: , mismatch: 7, identity: 0.767

gcagtgaatgaagtgatgtaagcatataaa	CRISPR spacer
tcgttcaataaagtgatataagcatataat	Protospacer
 *. * ***.*******.***********

17. spacer 2.1|559657|30|NZ_CP009159|CRISPRCasFinder,CRT matches to NC_019699 (Chroococcidiopsis thermalis PCC 7203 plasmid pCHRO.01, complete sequence) position: , mismatch: 8, identity: 0.733

cctaagaatgttgttatcaatattgattca	CRISPR spacer
agcgataatgttgttaactatattgattct	Protospacer
  ..* ********** * **********

18. spacer 2.1|559657|30|NZ_CP009159|CRISPRCasFinder,CRT matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 8, identity: 0.733

cctaagaatgttgttatcaatattgattca	CRISPR spacer
gcgtggaatgttgtaatcaatattgacata	Protospacer
 *  .********* ***********. .*

19. spacer 2.3|559789|30|NZ_CP009159|CRISPRCasFinder,CRT matches to NZ_CP050089 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b2, complete sequence) position: , mismatch: 8, identity: 0.733

gacagcattaatatcgcgatccgcatcctc	CRISPR spacer
cagagcatgaatatcgcgatctgcataaag	Protospacer
 * ***** ************.****

20. spacer 2.8|560119|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MN855824 (Bacteriophage sp. isolate 165, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
caaaaatgcaaaatatggcagcaaaccagt	Protospacer
 ********.*** **********  . *

21. spacer 2.8|560119|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MK605246 (Nodularia phage vB_NspS-kac68v162, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
ttaaaatgcgaatactggcagcaatgtcag	Protospacer
  ********** * **********.*...

22. spacer 2.8|560119|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to KU230356 (Bacteriophage vB_NpeS-2AV2, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
ttaaaatgcgaatactggcagcaatgtcag	Protospacer
  ********** * **********.*...

23. spacer 2.8|560119|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NC_048757 (Nodularia phage vB_NspS-kac68v161, complete genome) position: , mismatch: 8, identity: 0.733

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
ttaaaatgcgaatactggcagcaatgtcag	Protospacer
  ********** * **********.*...

24. spacer 2.15|560581|30|NZ_CP009159|CRISPRCasFinder,CRT matches to MT939486 (Erwinia phage pEa_SNUABM_12, complete genome) position: , mismatch: 8, identity: 0.733

gcagtgaatgaagtgatgtaagcatataaa	CRISPR spacer
tagttcaataaagtgatataagcatataat	Protospacer
  . * ***.*******.***********

25. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MN871480 (UNVERIFIED: Pseudomonas phage PaSz-1_45_270k, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

26. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MT133560 (Pseudomonas phage fnug, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

27. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to DI373487 (KR 1020130142837-A/1: Bacteriophage of Pseudomonas aeruginosa and uses thereof) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

28. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MN871489 (UNVERIFIED: Pseudomonas phage PaZh_1, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

29. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NC_042081 (Pseudomonas phage SL2, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

30. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to KU521356 (Pseudomonas phage KTN4, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

31. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to MW057919 (Pseudomonas phage vB_PaeM_kmuB, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

32. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NC_042060 (Pseudomonas phage PA7, partial genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

33. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to AP019418 (Pseudomonas phage PA02 DNA, nearly complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

34. spacer 2.5|559921|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NC_004629 (Pseudomonas phage phiKZ, complete genome) position: , mismatch: 9, identity: 0.7

aaaacgtgagagaatttattcatttttgga	CRISPR spacer
tgtttttgagagattttattaatttttggt	Protospacer
 .  . ******* ****** ********

35. spacer 2.8|560119|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050441 (Tolypothrix sp. PCC 7910 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

aaaaaatgcgaaaaatggcagcaatattga	CRISPR spacer
tatccccgcgaaaaatagcagcaatattat	Protospacer
 *    .*********.***********.

36. spacer 2.14|560515|30|NZ_CP009159|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KY000060 (Agrobacterium tumefaciens strain CFBP2407 plasmid pTi_CFBP2407, complete sequence) position: , mismatch: 9, identity: 0.7

taggacggagcttataccttcgtaaagcaa	CRISPR spacer
caggacggagcatataccttcgcactctct	Protospacer
.********** **********.*   .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

359417 : 367789

Stx_converting_phage(33.33%)

tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014991126.1\|359417_360797_-	two-component sensor histidine kinase	W8CYF6	Bacillus_phage	7.9e-14	27.0
WP_014991127.1\|360789_361455_-	response regulator	Q6XM27	Feldmannia_irregularis_virus	2.5e-05	27.3
WP_014991128.1\|361638_361998_-	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	1.6e-11	37.5
WP_014991129.1\|362054_362423_-	YgiW/YdeI family stress tolerance OB fold protein	A0A1I9LJU6	Stx_converting_phage	7.3e-15	42.1
WP_014991130.1\|362465_362849_-	NirD/YgiW/YdeI family stress tolerance protein	NA	NA	NA	NA
WP_014991131.1\|363110_364376_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.4e-96	50.9
WP_014991132.1\|364604_365492_-	NAD(+) kinase	NA	NA	NA	NA
WP_158319027.1\|365617_365755_-	hypothetical protein	NA	NA	NA	NA
WP_014991133.1\|365857_367789_+\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	6.7e-128	37.5

DBSCAN-SWA_2

636188 : 647803

uncultured_Caudovirales_phage(71.43%)

protease,tRNA,portal,head,capsid,terminase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014991377.1\|636188_637274_-\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_014991378.1\|637319_638249_-	uridine diphosphate-N-acetylglucosamine-binding protein YvcK	A1IMD5	Streptococcus_phage	1.1e-32	32.7
WP_014991379.1\|638343_639408_-	AI-2E family transporter	NA	NA	NA	NA
WP_005622811.1\|639465_640221_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_014991381.1\|641132_641531_+\|tail	tail protein	NA	NA	NA	NA
WP_014991382.1\|641540_642728_+\|capsid	phage major capsid protein	A0A2H4JED2	uncultured_Caudovirales_phage	2.9e-137	65.6
WP_005607685.1\|642802_643375_+\|head,protease	HK97 family phage prohead protease	A0A2H4JB68	uncultured_Caudovirales_phage	4.9e-50	55.9
WP_014991383.1\|643376_644609_+\|portal	phage portal protein	A0A2H4JFJ9	uncultured_Caudovirales_phage	7.6e-133	58.5
WP_014991384.1\|644592_644940_+\|head	phage head closure protein	NA	NA	NA	NA
WP_014991385.1\|644929_645238_+\|head,tail	phage gp6-like head-tail connector protein	A0A2D1GNK0	Pseudomonas_phage	8.5e-09	34.0
WP_005620820.1\|645246_645603_+	HNH endonuclease	NA	NA	NA	NA
WP_005607679.1\|645776_646136_+\|terminase	phage terminase small subunit P27 family	A0A2H4JHS3	uncultured_Caudovirales_phage	9.8e-41	68.7
WP_014991387.1\|646132_647803_+\|terminase	terminase large subunit	A0A2H4JB64	uncultured_Caudovirales_phage	1.4e-243	70.2

DBSCAN-SWA_3

1136803 : 1143366

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081541509.1\|1136803_1138093_+	aminopeptidase PepB	Q6GYZ8	Mycoplasma_phage	3.3e-30	32.5
WP_014991738.1\|1138220_1139156_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.1e-38	35.8
WP_014991739.1\|1139165_1139654_+	transcription elongation factor GreB	NA	NA	NA	NA
WP_005596393.1\|1139744_1140206_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	7.9e-43	59.5
WP_014991740.1\|1140316_1141522_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.8e-107	50.3
WP_014991741.1\|1141585_1142233_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	9.1e-45	43.3
WP_014991742.1\|1142280_1143366_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	8.6e-48	35.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009159

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection