CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007663	Brucella abortus strain 63 75 chromosome 1, complete sequence	1 crisprs	csa3,WYL,DEDDh	0	1	2	0
NZ_CP007662	Brucella abortus strain 63 75 chromosome 2, complete sequence	1 crisprs	csa3,cas3,DEDDh	0	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007663_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007663_1

1560961-1561049

Orphan

Consensus_repeat	Method
TTGTCAGCAACGCCCTTGGCATTGGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007663_1

>merge|NZ_CP007663|1|1560961-1561049|CRISPRCasFinder
TTGTCAGCAACGCCCTTGGCATTGGTGTCGATCCGACCGCTGTTCCGGCCAATGGCAGTCTTGTTGTCGGCAACGCCCTTGGCATTGGT

>NZ_CP007663|1|1|1560961-1561049|CRISPRCasFinder
TTGTCAGCAACGCCCTTGGCATTGGT	GTCGATCCGACCGCTGTTCCGGCCAATGGCAGTCTTG
TTGTCGGCAACGCCCTTGGCATTGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007663.1\|WP_002964927.1\|1563072_1563342_-\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_CP007663.1\|WP_002964920.1\|1556226_1556901_-\|nicotinate-nucleotide-adenylyltransferase	unknown	unknown	gnl\|CDD\|234611
NZ_CP007663.1\|WP_002964922.1\|1558193_1559330_-\|glutamate-5-kinase	unknown	unknown	gnl\|CDD\|235460
NZ_CP007663.1\|WP_002964932.1\|1569387_1570827_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007663.1\|WP_002964916.1\|1552685_1554035_-\|murein-hydrolase-activator-EnvC	unknown	unknown	gnl\|CDD\|227278
NZ_CP007663.1\|WP_002964914.1\|1550613_1551150_-\|RNA-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|234820
NZ_CP007663.1\|WP_002964935.1\|1568590_1569277_-\|IS6-like-element-IS2020-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP007663.1\|WP_002971156.1\|1556900_1558184_-\|glutamate-5-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|234685
NZ_CP007663.1\|WP_002972331.1\|1555692_1556064_-\|ribosome-silencing-factor	unknown	unknown	gnl\|CDD\|223870
NZ_CP007663.1\|WP_002964928.1\|1563367_1563796_-\|50S-ribosomal-protein-L21	unknown	unknown	gnl\|CDD\|235510
NZ_CP007663.1\|WP_002964915.1\|1551367_1552696_-\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NZ_CP007663.1\|WP_002964931.1\|1568031_1568370_+\|AzlD-domain-containing-protein	unknown	unknown	gnl\|CDD\|377512
NZ_CP007663.1\|WP_002964918.1\|1555164_1555674_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	unknown	unknown	gnl\|CDD\|234634
NZ_CP007663.1\|WP_002964925.1\|1561690_1562248_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224168
NZ_CP007663.1\|WP_002970320.1\|1554147_1555047_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007663.1\|WP_002969195.1\|1565432_1567361_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|369778
NZ_CP007663.1\|WP_002964923.1\|1559357_1560383_-\|GTPase-ObgE	unknown	unknown	gnl\|CDD\|237048
NZ_CP007663.1\|WP_002964926.1\|1562301_1562952_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP007663.1\|WP_002964935.1\|1564505_1565192_+\|IS6-like-element-IS2020-family-transposase	unknown	unknown	gnl\|CDD\|225853
NZ_CP007663.1\|WP_002964930.1\|1567357_1568032_+\|AzlC-family-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|377070

Protein	Function_ID	Function_description	E-value
NZ_CP007663.1\|WP_002964927.1\|1563072_1563342_-\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	1.22436e-55
NZ_CP007663.1\|WP_002964920.1\|1556226_1556901_-\|nicotinate-nucleotide-adenylyltransferase	gnl\|CDD\|234611	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase.	4.98816e-76
NZ_CP007663.1\|WP_002964922.1\|1558193_1559330_-\|glutamate-5-kinase	gnl\|CDD\|235460	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional.	0
NZ_CP007663.1\|WP_002964916.1\|1552685_1554035_-\|murein-hydrolase-activator-EnvC	gnl\|CDD\|227278	COG4942, COG4942, Membrane-bound metallopeptidase [Cell division and chromosome partitioning].	4.17551e-139
NZ_CP007663.1\|WP_002964914.1\|1550613_1551150_-\|RNA-pyrophosphohydrolase	gnl\|CDD\|234820	PRK00714, PRK00714, RNA pyrophosphohydrolase; Reviewed.	1.15741e-82
NZ_CP007663.1\|WP_002964935.1\|1568590_1569277_-\|IS6-like-element-IS2020-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.8584e-86
NZ_CP007663.1\|WP_002971156.1\|1556900_1558184_-\|glutamate-5-semialdehyde-dehydrogenase	gnl\|CDD\|234685	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional.	0
NZ_CP007663.1\|WP_002972331.1\|1555692_1556064_-\|ribosome-silencing-factor	gnl\|CDD\|223870	COG0799, COG0799, Uncharacterized homolog of plant Iojap protein [Function unknown].	1.05797e-48
NZ_CP007663.1\|WP_002964928.1\|1563367_1563796_-\|50S-ribosomal-protein-L21	gnl\|CDD\|235510	PRK05573, rplU, 50S ribosomal protein L21; Validated.	1.70978e-47
NZ_CP007663.1\|WP_002964915.1\|1551367_1552696_-\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	1.24346e-155
NZ_CP007663.1\|WP_002964931.1\|1568031_1568370_+\|AzlD-domain-containing-protein	gnl\|CDD\|377512	pfam05437, AzlD, Branched-chain amino acid transport protein (AzlD). This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD is known to be involved in conferring resistance to 4-azaleucine although its exact role is uncertain.	0.00724537
NZ_CP007663.1\|WP_002964918.1\|1555164_1555674_-\|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH	gnl\|CDD\|234634	PRK00103, PRK00103, rRNA large subunit methyltransferase; Provisional.	4.52877e-70
NZ_CP007663.1\|WP_002964925.1\|1561690_1562248_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224168	COG1247, COG1247, Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane].	1.87083e-08
NZ_CP007663.1\|WP_002969195.1\|1565432_1567361_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|369778	pfam08242, Methyltransf_12, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	2.58677e-14
NZ_CP007663.1\|WP_002964923.1\|1559357_1560383_-\|GTPase-ObgE	gnl\|CDD\|237048	PRK12299, obgE, GTPase CgtA; Reviewed.	0
NZ_CP007663.1\|WP_002964926.1\|1562301_1562952_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.03822e-35
NZ_CP007663.1\|WP_002964935.1\|1564505_1565192_+\|IS6-like-element-IS2020-family-transposase	gnl\|CDD\|225853	COG3316, COG3316, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	8.8584e-86
NZ_CP007663.1\|WP_002964930.1\|1567357_1568032_+\|AzlC-family-ABC-transporter-permease	gnl\|CDD\|377070	pfam03591, AzlC, AzlC protein.	6.64901e-26

>NZ_CP007663.1|WP_002964923.1|1559357_1560383_-|GTPase-ObgE
MKFLDQAKIYIRSGNGGAGAVSFRREKFLEFGGPDGGDGGRGGDVWVEAVDGLNTLIDYRYQQHFKAKTGMHGMGRNMTGGKGDDVVLRVPVGTQIFEEDNETLICDITEVGQRYRLAKGGNGGFGNLHFTTSTNRAPRRANPGQEGIERTIWLRLKLIADAGLVGLPNAGKSTFLASVTAAKPKIADYPFTTLHPNLGVARIDGREFVIADIPGLIEGASEGVGLGDRFLGHVERTRVLLHLVSAQEEDVAKAYQVIRGELEAYEHGLADKPEIVALSQVDTLDPETRKAKVKALKKACGCEPLLLSAVSHEGLNDTLRQLARIIDLSRAEEAGTAQAEE
>NZ_CP007663.1|WP_002964922.1|1558193_1559330_-|glutamate-5-kinase
MLKKLKDYRRIVVKIGSALLVDRATGLKRKWLESLGQDIAALQHAGVEVLVVSSGAIALGRTVLGLPKKALKLEESQAAAAAGQIALAKAYADVLGGHGIKSGQILVTLSDTEERRRYLNARATIETLLKLKAVPIINENDTVATTEIRYGDNDRLAARVATMMGADLLILLSDIDGLYTAPPHKNPDAQFLPFVETITPQIEAMAGAAASELSRGGMKTKLDAGKIANAAGTAMIITSGTRFGPLSAIDRGERATLFEAAHAPVNAWKTWISGNLEPAGRLTVDAGAVKALKSGKSLLPAGVKEVDGDFERGDTVAVMNEDGREIARGLIAYDAADARKVAGHKSDEISAILGYDARAAMIHRNDLVVRAASDAKAA
>NZ_CP007663.1|WP_002971156.1|1556900_1558184_-|glutamate-5-semialdehyde-dehydrogenase
MLVKADMTKDIAQVMAEVGRKAKAAAAPLSIATSEQKNKALNAAADAILEARADILEANRLDLANAEKNGMAASFVDRLTLNEARIDAIAEGIRAIATLPDPVGEVIAEWDRPNGLHIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSAHSSAAIHKALVKGLEAANLPADAIQILPVTDRAAVGEMLKGLGGAIDVIVPRGGKSLVARVQSEARVPVFAHLEGICHLYIDKSADLDMARRIALDAKMRRTGICGAAETLLVDRAVASTHLAPILGDLAAGGCEIRGSAEVLALYPAAKPATEEDWSTEYLDAIISVALVDGISGAIDHINRYSSHHTEAIVAEDAQTVARFFNEIDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVRGSGQVRG
>NZ_CP007663.1|WP_002964920.1|1556226_1556901_-|nicotinate-nucleotide-adenylyltransferase
MKFGFGLSALKEQYPGVDAHYLRMPHVEKGMTVGLFGGSFNPPHGGHALVAEIAIRRLKLDQLWWMVTPGNPLKDSRELAPLSERLRLSEEVAEDPRIKVTALEAAFHVRYTADTLALIRNANPDVYFVWVMGADNLASFHRWQRWREIAQNFPIAIIDRPGSTLSYLSSRMAQTFSDSRLDERYAPVLARRMPPAWTFIHGPRSSLSSTALRKVQLKKAPSKK
>NZ_CP007663.1|WP_002972331.1|1555692_1556064_-|ribosome-silencing-factor
MNETNLVSATFDAALASLENSKAESIIPIDIRGRSTIGDYMIVASGRSHRHVTAVADHLVQALREAGCKEMRVEGLESGDWVLIDTGDIIVHIFRPEVRDFYNLEKIWLDDDFGDERAPGLVH
>NZ_CP007663.1|WP_002964918.1|1555164_1555674_-|23S-rRNA-(pseudouridine(1915)-N(3))-methyltransferase-RlmH
MRVSVFAVGRMKSGPERELVERYFDRFAKAGPPLGLEFAGVSEIPESRGQTAQLRKAEEAQRIHEALDNAKSGGTSSGGAALILLDERGKTLGSEAFAAIVGRMRDDGKRQLIVAIGGPDGHDPALRSRADLVLALGELTWPHQIARILIAEQLYRAATILAGHPYHRS
>NZ_CP007663.1|WP_002970320.1|1554147_1555047_-|hypothetical-protein
MSSPTIITLSSIPPRFGLLKPTLFSLLSQRLKAEEVRLYIPHKYRRFPDWDGRLPEVPAGITIVRCDEDLGPATKVLPAARDLKGRDVDILFCDDDKIYDANWHQRFKAEAARKPGHCIIEDGETFPDIADAGRPADRLPRSRWKPKDFKYRMKRIASLFLYKPNRGTPGYVDRISGFAGVLVHPDWFDELFYDIPDIMWTVDDPWISGHLERRGIPIWMIGRNSRRAEGKASGVSALLNHVEDGQDRVDADLLVIDYFRQHYGIWQKTKMIDEKATLRTASMREMMRRRKAELGLIDP
>NZ_CP007663.1|WP_002964916.1|1552685_1554035_-|murein-hydrolase-activator-EnvC
MNSIGLFRTLGGFAPLRAGRLLAGFALAGALACAPPAVAQDALKQQRDQMASEYEKLSNELTVTGDTLKQLEDEVASLKKDQSTITAALIQSAKTDKKLQQDIADIADRLVALREQEDGIRASLRARRGVLAEVLAALQRMGLNPPPAILVRPDDALASVRSAVLLGAVVPDMRDQVKELTGDLKDMQHVSASIAQEQEKLKETRTAQAEERERQSLLLEEKKKLQRQSEQEIEAQRKHSEELAAKAGSLKELIASLDKQMASVREAAEAARKAEAERLAAAKEKAGESTPGDRHLRAQSDFSTLQGRLVLPAAGKIMRRFGDKDGVGGSMMGQVVETLPSATITSPSDGVVLYAGVFRSYGQLLILDAGNGYHIVMAGMGRIDVAQGQFVLAGEPVGAMGEKLLASVAPVEVGNGAPLLYIEFRKDGKPVDPAPWWTERLSGRTQNDT
>NZ_CP007663.1|WP_002964915.1|1551367_1552696_-|S41-family-peptidase
MIRKLSLLFAGALLGASAMVMVQGAPASTAFAAGKDSDVYKELALFGDIFERVRAQYVTPPDDKKLIESAINGMLTSLDPHSSYLNPEAAQDMRVQTKGEFGGLGIEVTMDNDLVKVIAPIDDTPASKAGVLSGDLITKIDGQEVRGLSLTDAVDKMRGEVGAPIELTILRKGADKPITLKINRAIIKVKAVRSRVENDVGYLRIISFTEQTSEDLKKAIKDIQEKVPADKLKGYVLDLRLNPGGLLDQAVAVSDAFLDKGEIVSTRGRDPQDVTRFDVRKGDLTNGKPLIVLINGGSASASEIVAGALQDHRRATVLGTQSFGKGSVQTIIPLGENGSLRLTTALYYTPSGKSIQGKGITPDIKVDQPLPPELKGEDVVRGESELKGHIKGNAEDASGSGSSAYVPPDPKDDLQLNEALKLLRGEVANAAFPPDPKKGVLN
>NZ_CP007663.1|WP_002964914.1|1550613_1551150_-|RNA-pyrophosphohydrolase
MSEHKGPTGAMVDPESLPYRPCVGLMVLNKAGLVWAGRRIVIPGDEMDGATQLWQMPQGGIDKGEDPAQAALRELYEETGMTSVSLLEEASDWINYDLPPHLMGLALKGKYRGQTQKWFAYRFEGDESEIAINPPPGGHTAEFDCWEWKPMADLPNLIVPFKRKVYEQVVATFRHLAA
>NZ_CP007663.1|WP_002964925.1|1561690_1562248_-|GNAT-family-N-acetyltransferase
MNDICTIARDKVVVRALEKADLQRYRAIRLNALQRAPMSFGSTFEEENAYSDTIFARRLEKVDGNAIFGAFHGEELLGIAGHHRHERRTERHRGTLASVYVEPQARGLKLGEALVQKVIDHAARHVVVLDARVVATNEAAKRIYYALGFKTCGVERKALLVQGQYLDQELIYIDFSDPAWKDKLG
>NZ_CP007663.1|WP_002964926.1|1562301_1562952_-|GNAT-family-N-acetyltransferase
MVVEEESYEASCCKREADYADASPGLEKELGYVLDCPILVTERLVLRPPHAEDVDAISYLANNARVSSMLARMPHPYTRENALDFVGRVRKGEMGNCIYAITQAETGIFMGCCGIHPYKHGEGLEIGYWLGEPYWGHGFATEAAHALIDLAFRATGIGRLHVSCRASNGGSRRVIHKCGFQFSGMGMADSLAAGNVPVEHYVLDRRTWIGLRSWQS
>NZ_CP007663.1|WP_002964927.1|1563072_1563342_-|50S-ribosomal-protein-L27
MAHKKAGGSSRNGRDSESKRLGVKKFGGEAVLAGNIIVRQRGTKWHPGANVGLGKDHTIFATVNGSVSFRTKANGRTYVSVNPIAEAAE
>NZ_CP007663.1|WP_002964928.1|1563367_1563796_-|50S-ribosomal-protein-L21
MFAVIKTGGKQYRVAANDLIKVEKVAGEAGDIVEFAEVLMVGSTIGAPTVAGSLVTAEVVEQGRGRKVIAFKKRRRQNSKRTRGHRQELTTIRISEILTDGAKPSKKAAEKKAPKADAAEGEAAKPKKAAPKKAAAKAESAE
>NZ_CP007663.1|WP_002964935.1|1564505_1565192_+|IS6-like-element-IS2020-family-transposase
MAIDFKGAHFPKNVILYAVFFYVRYPVSYRDLQEILAERGIEVDHATLNRCVVRYSPQIATQAQMRKRHTAGSWRVDETYLKVRGKWVYLYRAVDRDGQTLDFMLSERRNVGAARRFFKKAITSSGVPHKIVIDKSGANLAGAQAVNNILKITGADKLIEILQVKYLNNILEQDHRFIKRITKHMLGFKAFHSAAATIAGIEVAHMIRKNQFANDNCSPFKVFAELTA
>NZ_CP007663.1|WP_002969195.1|1565432_1567361_+|helix-turn-helix-domain-containing-protein
MNLARLRKRRGLTLDGLAELSSISRAAISALENGAGNPRLETLWSLANALGIEFGELVGARNDVEVVEADGISVRLIDRQTRPRTVEAFLLDLPANAKRHADAHVHGVSENVVVLSGAIAVGPLSTPMLLHAGQSHQFAADVPHIYSSGAEPSRAIVTIIYPEDDTALTSEDQELEWPVGKDEWANVRAQLNRARIEVQNGYAHSRITFKSAPEPLQSAIRLIEDELATRSGIAETAKVFVTGNRTPAIATFYRTTQMRPLPINEQLATPLITNCRELANAAITPWLAKKVDADDLHAKSQNSTHIIEAALAAEVLTRLGRPTVPTGISQKQVTPKQSPLMDRMFEDRIDVDVYEAYELVHPAYARQVLAVAETLPVFATKSDQTILDVGTGPGLPLQMLLELRPELHVVAIDPSEIANVHLSRRFADDSRVQAVQASIIDYRPADYLFDAAVSIGASHHLDTKQFLSSIHECLAAEGVLVIADEMLAPFRDRRERNLALVTHHLWYILDTLFDLPASSSEAERAVCDILKQGLPPAMSLALSGRSEAATRQVRETFKAATDIDLGNALVAREAAFNRFHLLELQALVAGLDYEVEQKTYPARFVSLAESSGFSLLQHRRIYATQGDGSYDAGTHLFVMVKR
>NZ_CP007663.1|WP_002964930.1|1567357_1568032_+|AzlC-family-ABC-transporter-permease
MTERWRQFFHGARSAIPIILGYLPVAFAFGTAASGQGLALLDSTAISALMFSGANQAFFLSAVASGLPTIAIVAICAVASLRHILYGFVLRLRLAGGLASRLAFAFGLTDEVFATVLNATEKSKPDGGWIFGLAFFAWISWVAATFFGAWMGNILQAQFLQLSDALHFALPALFLGLVWVSTSARNVIPMVAAAVIAVMFLCLNLPALAIPGAASAALLARRGD
>NZ_CP007663.1|WP_002964931.1|1568031_1568370_+|AzlD-domain-containing-protein
MSTELWIAVIVIGVLTYITRAVPFLMRLAGNTAPAARAWLSALGPCLLSAMATVVFLDGFQTSIQIGKIIPFLVGSVFASVSMSVRPDPGIGTVAGVTGWWLAASIGSVPTF
>NZ_CP007663.1|WP_002964935.1|1568590_1569277_-|IS6-like-element-IS2020-family-transposase
MAIDFKGAHFPKNVILYAVFFYVRYPVSYRDLQEILAERGIEVDHATLNRCVVRYSPQIATQAQMRKRHTAGSWRVDETYLKVRGKWVYLYRAVDRDGQTLDFMLSERRNVGAARRFFKKAITSSGVPHKIVIDKSGANLAGAQAVNNILKITGADKLIEILQVKYLNNILEQDHRFIKRITKHMLGFKAFHSAAATIAGIEVAHMIRKNQFANDNCSPFKVFAELTA
>NZ_CP007663.1|WP_002964932.1|1569387_1570827_-|hypothetical-protein
MASKTTLNAKNLEALGAKRLAELLIEISTGNANHKRLLRMELVGNSSGAELAREVRKRLGSIGRSKSWIDWQNAKSVRADLEAQRKSIAEKIAPTDPNEAFELIWQFLSLADPIFERSCDGSGALIESFHAACEDAGRIAAMAKVPIDRLVEKIFSVLQDNGYGQYDALIEAMAPALGEAGLRKLQRAFEAWAKEPQPKVASKDKEVIAWSSDGPVYRDQLYASGKSITVKVVLQQVADALGDVDLYIEQQSKESQTFATVTTDIARRLLAAGRAEDALTALEKTKFDSCREIPFEWQILRAEVLESLGRAEEAQQFRWKSFEQNLNDELLREYVKRLPDFDDVEAEEKAFAFVRAVADANHALYFFLQYPSLSEASKLVVSRASEMDGDHYELMSDAAEKLSAKFPLAATILLRAMIDFTLNNARSSRYKHAARHLLECGALSRSIEDYHSFAPHEAYIADLRKMHGRKHGFWPLVDR

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007663_1	1.1\|1560987\|37\|NZ_CP007663\|CRISPRCasFinder	1560987-1561023	37	NZ_CP020810	Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence	75259-75295	8	0.784

1. spacer 1.1|1560987|37|NZ_CP007663|CRISPRCasFinder matches to NZ_CP020810 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.784

gtcgatccgaccgctgttccggccaatggcagtcttg	CRISPR spacer
atcgatccgaccgctgttcctgccgatggcgaacccg	Protospacer
.******************* ***.*****.. *..*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

313832 : 416605

Hokovirus(10.0%)

transposase,holin,integrase,portal,tail,protease,head,capsid

attL 409179:409193|attR 419214:419228

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002969843.1\|313832_314015_-\|transposase	transposase	NA	NA	NA	NA
WP_094866392.1\|314357_315120_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	1.3e-21	40.8
WP_002975117.1\|315017_315335_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002963688.1\|315945_317301_+	phosphomannomutase	NA	NA	NA	NA
WP_002963689.1\|317371_318796_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	9.0e-53	30.8
WP_002963690.1\|318828_320001_+	AGE family epimerase/isomerase	NA	NA	NA	NA
WP_002969456.1\|320083_321193_+	glycosyltransferase	NA	NA	NA	NA
WP_109790518.1\|321541_321745_+	hypothetical protein	NA	NA	NA	NA
WP_002963692.1\|321884_323420_+	sugar ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.4e-14	25.3
WP_002963693.1\|323440_324442_+	ABC transporter permease	NA	NA	NA	NA
WP_002969455.1\|324520_325483_+	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_002963695.1\|325540_326593_+	sugar phosphate isomerase/epimerase	NA	NA	NA	NA
WP_002970975.1\|326600_327698_+	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_002963697.1\|327739_329047_-	xylose isomerase	NA	NA	NA	NA
WP_002963698.1\|329168_330545_-	xylulokinase	NA	NA	NA	NA
WP_002963699.1\|330577_331609_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_002971540.1\|331870_332389_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002969452.1\|332295_332865_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_002963701.1\|333402_334866_-	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_002963702.1\|335017_336700_-\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	7.9e-40	30.6
WP_002969060.1\|336702_337299_-	transcriptional regulator BetI	NA	NA	NA	NA
WP_002963705.1\|337489_338512_+	asparaginase	NA	NA	NA	NA
WP_002963706.1\|338556_339027_+	transcription elongation factor	NA	NA	NA	NA
WP_002963707.1\|339023_339413_-	type II toxin-antitoxin system death-on-curing family toxin	A0A1B3AYM0	Gordonia_phage	3.5e-07	44.6
WP_002963708.1\|339409_339640_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_002963709.1\|339700_340693_-	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_002963710.1\|340848_341526_+	FadR family transcriptional regulator	NA	NA	NA	NA
WP_002963712.1\|342857_343220_-	hypothetical protein	NA	NA	NA	NA
WP_002969061.1\|343555_345067_+	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	1.2e-82	44.0
WP_002963714.1\|345256_345973_-	L,D-transpeptidase	NA	NA	NA	NA
WP_002971536.1\|346031_346274_+	hypothetical protein	NA	NA	NA	NA
WP_002963715.1\|346275_346929_-	haloacid dehalogenase type II	NA	NA	NA	NA
WP_002963716.1\|347151_347751_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.2e-38	42.6
WP_002963717.1\|347922_348258_-	hypothetical protein	NA	NA	NA	NA
WP_002963718.1\|348375_350484_-	S9 family peptidase	NA	NA	NA	NA
WP_002963720.1\|351056_351485_+	MucR family transcriptional regulator	A0A1P8VVG0	Erythrobacter_phage	1.0e-20	47.6
WP_002969861.1\|351692_352004_-	hypothetical protein	NA	NA	NA	NA
WP_002966719.1\|352184_352640_+	hypothetical protein	NA	NA	NA	NA
WP_002970981.1\|352636_353431_+	hypothetical protein	NA	NA	NA	NA
WP_002963724.1\|353541_354858_+	amidase	NA	NA	NA	NA
WP_002963725.1\|354898_355324_-	SufE family protein	NA	NA	NA	NA
WP_002963726.1\|355403_355853_-	hypothetical protein	NA	NA	NA	NA
WP_002969448.1\|356143_357973_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	4.7e-22	28.9
WP_002971535.1\|357947_358916_+	peptidoglycan-binding protein	NA	NA	NA	NA
WP_002963729.1\|358929_359277_+	DUF1491 family protein	NA	NA	NA	NA
WP_002969865.1\|359287_360364_-	DUF2336 domain-containing protein	NA	NA	NA	NA
WP_002963731.1\|360561_361104_-	hypothetical protein	NA	NA	NA	NA
WP_002963732.1\|361096_361708_-	DUF1214 domain-containing protein	NA	NA	NA	NA
WP_002969866.1\|361714_363889_-	penicillin-binding protein 1A	NA	NA	NA	NA
WP_002963734.1\|364228_364741_+	hypothetical protein	NA	NA	NA	NA
WP_002970982.1\|364679_365927_+	DNA-packaging protein	A0A1V0DY66	Dinoroseobacter_phage	4.9e-71	40.4
WP_002963736.1\|365958_367152_+\|portal	phage portal protein	W8ECU7	Geobacillus_phage	7.0e-67	40.0
WP_002963737.1\|367148_367526_+	hypothetical protein	NA	NA	NA	NA
WP_002963738.1\|367512_368181_+\|head,protease	HK97 family phage prohead protease	A0A2H4JAI0	uncultured_Caudovirales_phage	1.7e-30	41.1
WP_002963739.1\|368202_369477_+\|capsid	phage major capsid protein	Q8HAD2	Salmonella_phage	6.3e-82	43.4
WP_002963740.1\|369641_370208_+	hypothetical protein	NA	NA	NA	NA
WP_002963741.1\|370204_370543_+\|head	phage head closure protein	NA	NA	NA	NA
WP_032449308.1\|370665_371073_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_002963743.1\|371113_371527_+\|tail	phage major tail protein, TP901-1 family	NA	NA	NA	NA
WP_002963744.1\|371523_371865_+	gene transfer agent family protein	NA	NA	NA	NA
WP_002963745.1\|371908_372079_+\|tail	phage tail assembly chaperone	NA	NA	NA	NA
WP_002970984.1\|372083_372629_+\|tail	phage tail tape measure protein	A0A0S2SYD9	Pseudomonas_phage	2.8e-07	46.4
WP_002963747.1\|372631_373264_+	TIGR02217 family protein	A0A0B5A2K3	Paracoccus_phage	2.9e-48	47.6
WP_002963748.1\|373260_374136_+	DUF2163 domain-containing protein	A0A0K1Y6Z2	Rhodobacter_phage	5.9e-47	38.9
WP_002963749.1\|374132_374555_+	peptidase P60	NA	NA	NA	NA
WP_002969445.1\|378486_378693_+	hypothetical protein	NA	NA	NA	NA
WP_002971526.1\|378854_379151_+	hypothetical protein	NA	NA	NA	NA
WP_002963753.1\|379229_379919_+	response regulator transcription factor	NA	NA	NA	NA
WP_002969444.1\|379993_381304_+	hypothetical protein	NA	NA	NA	NA
WP_002971524.1\|381397_381850_+	hypothetical protein	NA	NA	NA	NA
WP_002969443.1\|381950_383090_+	c-type cytochrome biogenesis protein CcmI	NA	NA	NA	NA
WP_002963757.1\|383086_383584_+	cytochrome c maturation protein CcmE	NA	NA	NA	NA
WP_002963758.1\|383603_385595_+	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA
WP_002963759.1\|385591_386068_+	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA
WP_002963760.1\|386209_387751_+\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	1.7e-28	29.8
WP_002963761.1\|387844_388552_+	response regulator transcription factor	NA	NA	NA	NA
WP_002963762.1\|388548_389955_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_002963763.1\|390077_393029_+	bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase	NA	NA	NA	NA
WP_002966727.1\|393073_395185_-	hypothetical protein	NA	NA	NA	NA
WP_002963765.1\|395455_397807_-	PAS domain-containing protein	A0A1V0SGX0	Hokovirus	6.3e-27	34.8
WP_002969067.1\|398197_400849_-	aminopeptidase N	NA	NA	NA	NA
WP_002963767.1\|401074_402034_+	DMT family transporter	NA	NA	NA	NA
WP_002970986.1\|402038_403295_-	MFS transporter	NA	NA	NA	NA
WP_002963769.1\|403456_404329_-	uracil-DNA glycosylase	NA	NA	NA	NA
WP_002963770.1\|404717_406409_+	electron transfer flavoprotein-ubiquinone oxidoreductase	NA	NA	NA	NA
WP_002969439.1\|406524_407493_-	AP endonuclease	NA	NA	NA	NA
WP_002963772.1\|407661_409164_-	AMP nucleosidase	NA	NA	NA	NA
409179:409193	attL	NA	NA	NA	NA
WP_002963775.1\|409730_410441_+	thiol:disulfide oxidoreductase	NA	NA	NA	NA
WP_002963776.1\|410499_410847_-	DUF2147 domain-containing protein	NA	NA	NA	NA
WP_004686532.1\|410843_411083_-	hypothetical protein	NA	NA	NA	NA
WP_002963778.1\|411352_411610_+	hypothetical protein	NA	NA	NA	NA
WP_002963779.1\|411669_412440_-	YitT family protein	NA	NA	NA	NA
WP_002963780.1\|413095_413746_+	hypothetical protein	NA	NA	NA	NA
WP_002963781.1\|413790_414165_-	DUF423 domain-containing protein	NA	NA	NA	NA
WP_002963782.1\|414182_415316_-	pyridoxal phosphate-dependent aminotransferase	A0A1X7QHI1	Faustovirus	9.1e-16	23.9
WP_002967515.1\|415678_416605_-\|integrase	site-specific integrase	A0A076YL28	Mesorhizobium_phage	2.9e-28	36.3
419214:419228	attR	NA	NA	NA	NA

DBSCAN-SWA_2

640518 : 652446

uncultured_Mediterranean_phage(90.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002969091.1\|640518_641370_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.4e-31	33.5
WP_002964011.1\|641362_642088_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.5e-43	45.7
WP_002964012.1\|642233_642452_+	twin-arginine translocase TatA/TatE family subunit	A0A1B1IVR9	uncultured_Mediterranean_phage	1.5e-07	65.1
WP_002969412.1\|642562_643144_+	twin-arginine translocase subunit TatB	NA	NA	NA	NA
WP_002964014.1\|643140_643965_+	twin-arginine translocase subunit TatC	A0A1B1IVR7	uncultured_Mediterranean_phage	9.8e-44	41.1
WP_002969092.1\|644041_645325_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	3.5e-104	47.0
WP_002964016.1\|645473_646241_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	6.1e-40	40.2
WP_002964017.1\|646237_646906_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	4.2e-13	37.8
WP_002964018.1\|647050_647236_+	hypothetical protein	NA	NA	NA	NA
WP_002964019.1\|647284_648583_+	peptidoglycan DD-metalloendopeptidase family protein	Q8SBN9	Clostridium_phage	1.0e-18	41.1
WP_002964020.1\|648631_649498_-	ATP-binding protein	NA	NA	NA	NA
WP_002964021.1\|649658_650000_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	9.1e-12	40.2
WP_002969969.1\|650118_652446_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	6.2e-51	43.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP007662

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007662_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007662_1

211582-211682

Orphan

Consensus_repeat	Method
ATGGACTTCTTGGAAGTCCATGCCGCCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007662_1

>merge|NZ_CP007662|1|211582-211682|CRISPRCasFinder
ATGGACTTCTTGGAAGTCCATGCCGCCCCCGCGCCGCTTTGCGGCGCAGGCATTTAGTTCATGGGCGAGCTTTATGGACTTCTTAGAAGTCCATGCCGCCC

>NZ_CP007662|1|1|211582-211682|CRISPRCasFinder
ATGGACTTCTTGGAAGTCCATGCCGCCC	CCGCGCCGCTTTGCGGCGCAGGCATTTAGTTCATGGGCGAGCTTT
ATGGACTTCTTAGAAGTCCATGCCGCCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007662.1\|WP_002966379.1\|221180_221654_-\|nucleoside-deaminase	unknown	unknown	gnl\|CDD\|223663
NZ_CP007662.1\|WP_002966386.1\|213394_213691_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP007662.1\|WP_002966396.1\|202947_203565_+\|LysE-family-translocator	unknown	unknown	gnl\|CDD\|224199
NZ_CP007662.1\|WP_002972153.1\|205192_206323_+\|ATP-phosphoribosyltransferase-regulatory-subunit	unknown	unknown	gnl\|CDD\|183413
NZ_CP007662.1\|WP_002971287.1\|219550_220222_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007662.1\|WP_002966392.1\|207087_208326_-\|sugar-MFS-transporter	unknown	unknown	gnl\|CDD\|340952
NZ_CP007662.1\|WP_002966380.1\|220566_221127_+\|cytochrome-b	unknown	unknown	gnl\|CDD\|225580
NZ_CP007662.1\|WP_002966398.1\|201198_201933_-\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|224294
NZ_CP007662.1\|WP_002966382.1\|216440_219359_+\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237514
NZ_CP007662.1\|WP_002967189.1\|202172_202829_+\|DNA-3-methyladenine-glycosylase-I	unknown	unknown	gnl\|CDD\|377025
NZ_CP007662.1\|WP_002966383.1\|215107_216097_+\|bifunctional-riboflavin-kinase/FAD-synthetase	unknown	unknown	gnl\|CDD\|235536
NZ_CP007662.1\|WP_002972151.1\|210656_210911_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007662.1\|WP_002966390.1\|209115_210507_-\|class-II-fumarate-hydratase	unknown	unknown	gnl\|CDD\|234779
NZ_CP007662.1\|WP_002966391.1\|208611_209013_-\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP007662.1\|WP_002972147.1\|214171_215020_+\|TIGR01459-family-HAD-type-hydrolase	unknown	unknown	gnl\|CDD\|319827
NZ_CP007662.1\|WP_002966395.1\|203675_205184_+\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|223202
NZ_CP007662.1\|WP_002966378.1\|221794_223540_+\|pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP007662.1\|WP_002966377.1\|223520_224084_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|223813
NZ_CP007662.1\|WP_002966393.1\|206319_207015_+\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|237438
NZ_CP007662.1\|WP_006076634.1\|224169_225714_+\|insulinase-family-protein	unknown	unknown	gnl\|CDD\|223685

Protein	Function_ID	Function_description	E-value
NZ_CP007662.1\|WP_002966379.1\|221180_221654_-\|nucleoside-deaminase	gnl\|CDD\|223663	COG0590, CumB, Cytosine/adenosine deaminases [Nucleotide transport and metabolism / Translation, ribosomal structure and biogenesis].	5.96751e-65
NZ_CP007662.1\|WP_002966386.1\|213394_213691_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	5.80408e-54
NZ_CP007662.1\|WP_002966396.1\|202947_203565_+\|LysE-family-translocator	gnl\|CDD\|224199	COG1280, RhtB, Putative threonine efflux protein [Amino acid transport and metabolism].	9.51794e-45
NZ_CP007662.1\|WP_002972153.1\|205192_206323_+\|ATP-phosphoribosyltransferase-regulatory-subunit	gnl\|CDD\|183413	PRK12295, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional.	2.67267e-157
NZ_CP007662.1\|WP_002966392.1\|207087_208326_-\|sugar-MFS-transporter	gnl\|CDD\|340952	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of L-fucose permease (also called L-fucose-proton symporter) and similar proteins such as glucose/galactose transporter and N-acetyl glucosamine transporter NagP. L-fucose permease facilitates the uptake of L-fucose across the boundary membrane with the concomitant transport of protons into the cell; it can also transport L-galactose and D-arabinose. Glucose/galactose transporter functions in the uptake of of glucose and galactose. The FucP-like subfamily belongs to the bacterial fucose permease, eukaryotic Major facilitator superfamily domain-containing protein 4 (FucP/MFSD4) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.18971e-166
NZ_CP007662.1\|WP_002966380.1\|220566_221127_+\|cytochrome-b	gnl\|CDD\|225580	COG3038, CybB, Cytochrome B561 [Energy production and conversion].	3.34911e-53
NZ_CP007662.1\|WP_002966398.1\|201198_201933_-\|L,D-transpeptidase	gnl\|CDD\|224294	COG1376, ErfK, Uncharacterized protein conserved in bacteria [Function unknown].	1.69228e-59
NZ_CP007662.1\|WP_002966382.1\|216440_219359_+\|isoleucine--tRNA-ligase	gnl\|CDD\|237514	PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional.	0
NZ_CP007662.1\|WP_002967189.1\|202172_202829_+\|DNA-3-methyladenine-glycosylase-I	gnl\|CDD\|377025	pfam03352, Adenine_glyco, Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.	3.88001e-109
NZ_CP007662.1\|WP_002966383.1\|215107_216097_+\|bifunctional-riboflavin-kinase/FAD-synthetase	gnl\|CDD\|235536	PRK05627, PRK05627, bifunctional riboflavin kinase/FAD synthetase.	2.77791e-157
NZ_CP007662.1\|WP_002966390.1\|209115_210507_-\|class-II-fumarate-hydratase	gnl\|CDD\|234779	PRK00485, fumC, fumarate hydratase; Reviewed.	0
NZ_CP007662.1\|WP_002966391.1\|208611_209013_-\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	2.4232e-20
NZ_CP007662.1\|WP_002972147.1\|214171_215020_+\|TIGR01459-family-HAD-type-hydrolase	gnl\|CDD\|319827	cd07525, HAD_like, uncharacterized family of the haloacid dehalogenase-like (HAD) hydrolase superfamily. The haloacid dehalogenase-like (HAD) hydrolases are a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members include 2-L-haloalkanoic acid dehalogenase (C-Cl bond hydrolysis), azetidine hydrolase (C-N bond hydrolysis); phosphonoacetaldehyde hydrolase (C-P bond hydrolysis), phosphoserine phosphatase and phosphomannomutase (CO-P bond hydrolysis), P-type ATPases (PO-P bond hydrolysis) and many others. Members are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.51221e-90
NZ_CP007662.1\|WP_002966395.1\|203675_205184_+\|histidine--tRNA-ligase	gnl\|CDD\|223202	COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].	4.66581e-159
NZ_CP007662.1\|WP_002966378.1\|221794_223540_+\|pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	6.08227e-83
NZ_CP007662.1\|WP_002966377.1\|223520_224084_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|223813	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair].	1.21532e-78
NZ_CP007662.1\|WP_002966393.1\|206319_207015_+\|ATP-phosphoribosyltransferase	gnl\|CDD\|237438	PRK13583, hisG, ATP phosphoribosyltransferase.	1.16784e-135
NZ_CP007662.1\|WP_006076634.1\|224169_225714_+\|insulinase-family-protein	gnl\|CDD\|223685	COG0612, PqqL, Predicted Zn-dependent peptidases [General function prediction only].	6.24983e-117

>NZ_CP007662.1|WP_002972151.1|210656_210911_-|hypothetical-protein
MRKELPIETAPKDGRKITVIWIDDDDQRNESIAQYRTLEQLRAGGGQWDEADTGWWTFTDNKTQRKIEPTAWIRETDDDESQED
>NZ_CP007662.1|WP_002966390.1|209115_210507_-|class-II-fumarate-hydratase
MAATRTETDTFGPIDVPADRYWGAQTQRSLQNFRIGGERMPLPLVHALGVVKRAAAETNIALGKLDPVLGQVIAVAASEVIEGKLDDHFPLVVWQTGSGTQSNMNANEVISNRAIELLGGEMGSKKPIHPNDHVNMSQSSNDSFPTAIHIATAVETVNRLYPALEHLTKALKVKEEAFKDIIKIGRTHTQDATPVTLGQEFSGYRAALEYARHRLEQSLADVFLLAQGGTAVGTGLNAPVGFDKGFAEAVSEITGLSFKTAPNKFEALASHGAVLNFHGSLNALAADLFKIANDIRFLGSGPRSGLGELSLPENEPGSSIMPGKVNPTQAEAMTMVATQVFGNQTAVTVAASQGHFELNVFKPVIAYNVLQSIRLLSDTMVSFADHCVEGIEPNTARIKELLERSLMLVTALAPAIGYDNAARIAKTAHKNGTTLREEALASGLVSEEDYDRLVRAERMIAPQ
>NZ_CP007662.1|WP_002966391.1|208611_209013_-|DoxX-family-protein
MSSITPKANGAATLIIRVFLSVLFIIAGYNKLTALDGTADYFASIGLPMPIVTAVVVGLIEFVGGLAILFGFKTRIAAVIVGLFTLGATLVAHMDFAEGMNLLIAQKNLAIAGGLFLLFLHGAGSLSIDARRG
>NZ_CP007662.1|WP_002966392.1|207087_208326_-|sugar-MFS-transporter
MATSIPTNNPLHTETSSQKNYGFALTSLTLLFFMWGFITCLNDILIPHLKNVFQLNYTQSMLIQFCFFGAYFIVSLPAGQLVKRISYKRGIVVGLIVAAIGCALFIPAASYRVYALFLGALFVLASGVTILQVAANPYVTILGKPETAASRLTLTQAFNSLGTTVAPVFGAVLILSAATDATVNAEADAVRFPYLLLALAFTVLAIIFAILKPPDVQEDEPALSDKKEGSAWQYRHLVLGAIGIFVYVGAEVSVGSFLVNFLSDPTVAGLSETDAAHHVAYFWGGAMVGRFIGSAAMRYIDDGKALAFNAFVAIILLFITVATTGHIAMWSVLAIGLFNSIMFPTIFSLALHGLGSHTSQGSGILCLAIVGGAIVPLIQGALADAIGIHLAFLMPIICYAYIAFYGLIGSKS
>NZ_CP007662.1|WP_002966393.1|206319_207015_+|ATP-phosphoribosyltransferase
MSVTLALPSKGRLKEKTLAVLEKAGYKVVLPDDDRNYRARVEGEDDLDILFLSASEIARELGYGSVDLGVTGEDLVRETLAHADERVAIEAQLGFGHADVVVAVPEVWRDVTTMADLDDVAADFRQRHGRRLRIATKYWRLTQQFFSQKHGIQVYRIVESLGATEGAPAAGSADMIVDITSTGSTLRANRLKVLEDGIILRSQACLVSARRSHTSRRVEEIAARIRAGLEI
>NZ_CP007662.1|WP_002972153.1|205192_206323_+|ATP-phosphoribosyltransferase-regulatory-subunit
MVGSRTSPIFNALRVELNAREAELVEIPLIQPADPFLDMAGEDLRRRIFLTENENGDSLCLRPEFTIPVCRNHIALNAATPKRYAYLGEVFRQRRDGAAEFLQAGIEDLGAADEAASDARSLADALSCVKAIAPDAPLEIVLGDQSVFAGMLKALGLPQGWRKKLLRSFGDAHSMDLALAELTGTQRRDPLPESLAVLVAEGDEIGLARMLEAEMLEAGISPGAGRTPVEIARRLIEKEDLAATHFPAAALDLLRQFLAIRVSLDMAAVTLRAFAADNALDLGAVLQKFEARADAIAQAGIEMKDIIYDASFGRPLDYYTGLVYEIRDASNRQDGVLAGGGRYDRLLTMLGACEAIPGVGFSIWLDRLQALAGEKQ
>NZ_CP007662.1|WP_002966395.1|203675_205184_+|histidine--tRNA-ligase
MADKADKMKARLPRGFVDRVPDDLRAAEKMMATIREVYDLYGFEPVETPLVEYTDALGKFLPDQDRPNEGVFSFQDDDEQWLSLRYDLTAPLARYVAENFETLPKPYRSYRNGWVFRNEKPGPGRFRQFMQFDADTVGAPNVSADAEMCMMMADTLERLGIQRGDYAIRVNNRKVLDGVLDAIGLEGEGNAAKRLNVLRAIDKLDKFGPEGVRLLLGKGRLDESGDFTKGAQLPEAAIEKVLAFTAAGGADGAQTIANLQAVVAGNAKGEEGVQELADMQALFFAGGYEGRVKIDPSVVRGLEYYTGPVFEAELLFDVTNEDGQKVVFGSVGGGGRYDGLVSHFRGEPVPATGFSIGVSRLMTALKNLGKLDVSDTVGPVVVLVMDKDTQNLGRYQKMVSDLRKAGIRAEMYVGGSGMKAQMKYADRRAAPCVVIQGSQEREAGEVQIKDLVEGKRLSAEIEDNVTWRESRPAQITVREDGLVDAVREILDAQARDRAEQSK
>NZ_CP007662.1|WP_002966396.1|202947_203565_+|LysE-family-translocator
MDLMSLVAFAGILVVAAGTPGPKVGALVARVISRGHKGVFPFMFGLWLGDAVWLSLAVWGLSALAHTFQTAFLVLKYAGVAYLIYLSWKMWFAPVDEEADENTIPRQGEGKRLFLSALGVTLGNPKIMVFYLAILPTVVDITHVSLTGWVELLLVMFMVLAAVDTAWVVLAAQARKFLRSPRMMRLANRTSAGMMAGAAVAIAAR
>NZ_CP007662.1|WP_002967189.1|202172_202829_+|DNA-3-methyladenine-glycosylase-I
MSDMAEARAGLVVGADGRTRCFWPGELPDYLAYHDNEWGVPVADDFRLFEKICLEGFQSGLSWLTILRKRENFRAAFDGFNFHRIATYDESDVERLLADKGIVRHRGKIVSVINNAGRAIELIEEKGSLAAYFWSFEPGAENRPAVVDYPTLVANPITATSTRISKDLKKRGWSFVGPTTVYAFMQAMGLVNDHIEGCHCRATIEKLRQNFKRPGKKL
>NZ_CP007662.1|WP_002966398.1|201198_201933_-|L,D-transpeptidase
MKPRHLLLIGSLTAIAVSIVSTGMAFADDRYSDLPPVRVSQAISAPWVAQLQDAPARPRIARQETRKTKTHYNKVSYQRPATNPATTARKKQFDPIYLPQIVSYSGKEKPGTIVIDTASRFLYLVQADGKARRYGVGVGKQGFSWKGTQRISRKAEWPTWTPPSEMIARERKKGRFLPARMDGGINNPLGARALYLGSTLYRIHGTNQPWTIGKAMSSGCIRMRNEDVTDLYERTPVGTRVVVR
>NZ_CP007662.1|WP_002966386.1|213394_213691_-|co-chaperone-GroES
MADIKFRPLHDRVVVRRVESEAKTAGGIIIPDTAKEKPQEGEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIVG
>NZ_CP007662.1|WP_002972147.1|214171_215020_+|TIGR01459-family-HAD-type-hydrolase
MILPERLDDLTDRYDAIFCDVWGVVHNGETSFAPAIAALQRARAKGVTIILVTNSPRPHPGVVAQMSLLGVPEDAYDRVVTSGDVTRDLIAEGPRRIFHIGCERELAIYDGLDVELVEEFEAAGVVCTGLYDDEVETPEDYRELLQRLRARNLPFICANPDIMVERGPRLIWCAGALAREYGQLGGRTLIAGKPHRPIYEAALRAVESIRGGSVDKSRILGIGDGVLTDVKGAADFGLDVLYISGGVHAADYAVNGDLDMAKMEAFLEKHGHRPIASLHALV
>NZ_CP007662.1|WP_002966383.1|215107_216097_+|bifunctional-riboflavin-kinase/FAD-synthetase
MKKSSFQRLTGTEGLPPALHDCVVAIGNFDGVHRGHQAVLERALELAERESRPAVVLTFEPHPRSFFKQDQPVDRLTDAAEKAEILRLMGFDAVMEQPFTAEFSQRSAEDFVQHILVEKLRASRVVTGYDFHFGKGRRGTPEFLCEAGKKAGFSVTLVDAFTDEGGMLVSSTRIRNLLSEGEVAEAAGLLGYRYRICGEVIHGKKLGRTLGFPTANMALAPQTSLKHGIYAVRFRLDDAMLYDGVASFGRRPTVDDEGAPLLETFLFDFSGDLYGKTAAVSFFGFLRGEVKFDGLDPLIDQMKQDEAQARALLADVRPISGLDRMLSFN
>NZ_CP007662.1|WP_002966382.1|216440_219359_+|isoleucine--tRNA-ligase
MTDTTKIDYSKTLYLPQTEFPMRAGLPQREPLFVQRWEEMNLYKKLREQAKDRPLYVLHDGPPYANGNIHIGHALNKILKDVITRSFQMRGYNSNYVPGWDCHGLPIEWKIEEKYRAAGKNKDEVPINEFRKECREFASNWIKVQTEEFKRLAILGDFENPYTTMNFHAEARIAGELLKFAASGQLYRGSKPVMWSVVERTALAEAEVEYHDIESDMIWVKFPVAGEVATENDLSGSAVVIWTTTPWTIPGNRAVSYSSRIEYGLFEITEAENDFGPRPGERLVFADKLVEECCAKAKLQFKRLRSVSAEELGKIVLDHPLKGFGGGYEFVVPMLDGDHVTDDAGTGFVHTAPSHGREDFEAWMDNARQLEARGIDPNIPFPVGDDGFYTKDAPGFGPDREGGPARVIDDNGKKGDANKVVIEQLIAADKLFARGRLKHSYPHSWRSKKPVIFRNTPQWFVYMDKNLGDGTTLRSRALKAIDETRFVPAAGQTRLRSMIEGRPDWVLSRQRAWGVPICVFVDEEGNILQDDAVNKRIMDAFEKEGADAWFADGARERFLGARAGEGWTQVRDILDVWFDSGSTHTFTLEDRPDLKWPADVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDVIKESGADILRLWVMTTDYWEDQRLGKSIIQTNIDAYRKLRNTIRWMLGTLAHDEGENVAYADLPELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMNVELSAFYFDIRKDALYCDAPSSIRRKAALQTVREIFVRLTTWLAPMLPFTMEEAWLDRYPQSVSIHAEQFRPTPAEWRDDVLAEKWRKVRAVRRVVTGALELERADKRIGSSLEAAPVVYIADKSLSDSLEGLDFAEICITSGISVSDAAAPEGAFTLGDVKGVAVVPERAKGEKCARSWRYTTDVGADPEFPEVSARDAAALRELQALGKL
>NZ_CP007662.1|WP_002971287.1|219550_220222_+|hypothetical-protein
MKIEGRVLVLMTALAGLSLSGCVSSPTYGTDKSAGAQLLDDVSNMASFGQGKKKERIDYKPRPDLVRPAPGDKGYLPAPQQSLASSSDPNWPESPEQRRKRVRDEITAHRDDPNYVSPVLQDAPVADNIRTALPRGNSRREDYASRTPTSDPAKVAALKAARAQQNQGSATTRRYLSEPPLAYRQPASTAAVGELGPDEAQKERERKKAASGSRGWRDYLPWN
>NZ_CP007662.1|WP_002966380.1|220566_221127_+|cytochrome-b
MSSKTYIWDDRSGYGLVSRGFHWLMALLFLWQFASAILRVFAKDTPIYSFFWSAHFQLGFALLVLALLRGVWGLMNIHRRPHKDGAIGKLAVLGHLAIYVLMITIPSLALLRAYGSGRGFSFLGMPIFAKTDIQNAMLTAPANALHGPLGWVLLAAIVGHVAMALVHHFALRDDTLRYMTGHGTPN
>NZ_CP007662.1|WP_002966379.1|221180_221654_-|nucleoside-deaminase
MRKAASITKANSATPMDIALEEAHAAGERGEVPIGAVIVRDGEIIARAGNRTREFNDVTAHAEILTIRQAGEMLGSERLIDCDLYVTLEPCAMCAAAISFARIRRLYYGASDPKGGGIEHGGRFYTQPTCHHAPEIYPGFCEADARKILKDFFREKR
>NZ_CP007662.1|WP_002966378.1|221794_223540_+|pseudouridine-synthase
MMAQGDAVTLLKGLYQMTTEDDNKGGKPPHGRKGHSDRPGRPDWDSRPRREGGDRDKPRKFGSRGAPVEEETSERIAKRLARAGIASRREAETMIAAGRIAVNGKVLESPAVNVKRTDIITVDGKPLRQTERTRLWLYHKPAGLVTTNRDPEGRPTVFEALPPEMPRVLSVGRLDINTEGLLLLTNDGGLSRVLELPSTGWLRRYRVRAHGKVTQQQLDELKNGIAVDGVFYGSVEAELERVQGANVWISIGLREGKNREVKNILGALGLTVGRLIRVSFGPFQLGDLEEGAVREIKGRTLRDQLGDKLIEESGADFDAPVLNEFSNAAVQGRTRREMEEGELPQEGERRRAPREREWISSTGERRRGREEKTEKVEPRRRGNANVWMAPGARPKGEKEAAKPARVEHQQPHRSAKFSGDLQMRPRRFSEEERGGEESGERRYKRPEGRFEREGGRPDNREKYEKHEGAGKERRPGKRERAELRNAEGQTTERGKGGFEGRKPGKPGGPRSEGRFGGADRDTRSGPRGSGPRGAGDGPRRGHDGKPGGKPGGKPTGRPGGKPGTKPGGGGRSGGGGADRRR
>NZ_CP007662.1|WP_002966377.1|223520_224084_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRIVGGKFRGRALVTPSTNAIRPTTDRTRESLFNILAHSFPDKVEGVRVLDLFAGTGALGLEALSRGARYATFVEESAEGRGILRQNIEALGLQGHTKILRRDACQLGIVGTMEPFDLVFADPPYGRRMGEKAFLSALQGGWLNPDALLVLEEDAQAALELDDRFAVREERNYGGTVIRLIELKAAS
>NZ_CP007662.1|WP_006076634.1|224169_225714_+|insulinase-family-protein
MNTPHSGCLLLSTVLGFALALPLAGGAVRAEMQPAAPAETQPAPAAPAAPVAQAALPEIFRLDGVSNFTLPNGMQVVVIPDHRAPVVTQMVWYHVGAADEAPGVSGIAHFLEHLMFKGTKNHPAGEFSARIASIGGQENAFTSYDYTAYFQRVSPEALEMVMDFESDRMENLVLDEEAVKTEREVILEERRMRIDSNPGAMLMENTDAVLFYNHPYRKPVIGWQQEMEKLSLKNAIDFYNQYYTPNNATLVIAGDVTPERVRELAMKTWANVHKRAEVLLRERPQEPAKHAARVVTLHDERVSTPSFRISWLVPSYANEKRFANAKPGDAPALDLLSEILGGSQLSQLYQQLIVKQGIAAETGASYDGDALDDGTFSVYGVPRNGASLGDVEKAVAAQVDRIIRDGVTQAELDQARNRFLKAVIFARDSQTGMARIYGSALSVGQTVDDIQKWPDLIKSVTVDQIKDVARRYLVKDQAVTSYLLPPDTEAESARKKPNAPANDASASGAGGAIQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007663

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP007662

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection