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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009126 Pectobacterium atrosepticum strain 21A plasmid pPA21A, complete sequence 0 crisprs NA 0 0 0 0
NZ_CP009125 Pectobacterium atrosepticum strain 21A chromosome, complete genome 8 crisprs csa3,DinG,DEDDh,cas3,cas1,cas3f,cas8f,cas5f,cas7f,cas6f,WYL 1 8 10 0

Results visualization

1. NZ_CP009125
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009125_1 10409-10508 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009125_2 30477-30576 Unclear NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009125_3 702796-702900 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009125_4 1415742-1415843 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009125_5 3907490-3907585 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009125_6 4032570-4033319 TypeI-F I-F
12 spacers
cas1,cas3f,cas8f,cas5f,cas7f,cas6f

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009125_7 4042235-4042443 TypeI-F I-F
3 spacers
cas6f,cas7f,cas5f,cas8f,cas3f,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009125_8 4043420-4043988 TypeI-F I-F
9 spacers
cas6f,cas7f,cas5f,cas8f,cas3f,cas1

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP009125_8 8.5|4043689|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043689-4043720 32 NZ_CP009125.1 1012023-1012054 0 1.0

1. spacer 8.5|4043689|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to position: 1012023-1012054, mismatch: 0, identity: 1.0

tccagtactcaggatcgtgttggtacgataaa	CRISPR spacer
tccagtactcaggatcgtgttggtacgataaa	Protospacer
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009125_8 8.1|4043448|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043448-4043479 32 MT012729 Salmonella phage vB_SenTO17, complete genome 14893-14924 4 0.875
NZ_CP009125_7 7.1|4042263|32|NZ_CP009125|CRISPRCasFinder 4042263-4042294 32 KY271400 Klebsiella phage 6 LV-2017, complete genome 9070-9101 7 0.781
NZ_CP009125_8 8.3|4043569|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043569-4043600 32 KT630649 Salmonella phage SEN34, complete genome 21546-21577 7 0.781
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 MF679144 Escherichia coli plasmid pBJ114-78, complete sequence 32168-32199 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NC_015965 Salmonella enterica subsp. enterica serovar Typhimurium plasmid R621a, complete sequence 1166-1197 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP025455 Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76334 plasmid pSAG-76334, complete sequence 1167-1198 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_KM409652 Escherichia coli strain REL5382 plasmid pB15, complete sequence 1167-1198 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_KP789019 Escherichia coli strain WCHEC13-8 plasmid pCMY42, complete sequence 63563-63594 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NC_011752 Escherichia coli 55989 plasmid 55989p, complete sequence 7142-7173 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP024270 Escherichia coli strain F8111-1SC3 plasmid unnamed1 19603-19634 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_KT754162 Shigella dysenteriae 1 strain BU53M1 plasmid pBU53M1, complete sequence 30557-30588 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_KT754167 Shigella dysenteriae 1 strain 69-3818 plasmid p69-3818, complete sequence 50469-50500 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP024226 Escherichia coli O169:H41 strain 2014EL-1345-2 plasmid unnamed3 33522-33553 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 CP042952 Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence 23562-23593 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP024468 Shigella dysenteriae strain BU53M1 plasmid pBU53M1, complete sequence 40149-40180 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP034963 Escherichia coli strain WCHEC020032 plasmid pCMY42_020032, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 MN007140 Escherichia coli strain 91 plasmid p91_CMY-42, complete sequence 926-957 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP026770 Shigella flexneri Y strain 93-3063 plasmid unnamed2 20464-20495 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP054364 Escherichia coli strain SCU-171 plasmid pSCU-171-1, complete sequence 61340-61371 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP026726 Escherichia coli strain 266917_2 plasmid p266917_2_03, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NC_019000 Escherichia coli plasmid pHUSEC41-2, complete sequence 7142-7173 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP009052 Escherichia coli NCCP15648 plasmid p15648-2, complete sequence 1400-1431 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP009053 Escherichia coli NCCP15648 plasmid p15648-3, complete sequence 7142-7173 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP041959 Escherichia coli strain EC2 plasmid pEC2_4, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP024230 Escherichia coli O25:NM strain 2014EL-1343-2 plasmid unnamed2 21545-21576 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NC_014477 Escherichia coli plasmid pCT, complete sequence 1399-1430 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP018993 Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_2, complete sequence 38987-39018 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 AP017892 Escherichia coli plasmid pN23 DNA, complete sequence, strain: N23 58349-58380 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 AP017893 Escherichia coli plasmid pS11 DNA, complete sequence, strain: S11 58349-58380 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP034255 Escherichia coli strain IVRI Kol CP4 plasmid pESBL-EA11 20961-20992 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 KY463221 Escherichia coli plasmid pCMY-42, complete sequence 3148-3179 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP021533 Escherichia coli strain AR_0149 plasmid tig00000220, complete sequence 31082-31113 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP005999 Escherichia coli B7A plasmid pEB1, complete sequence 76341-76372 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_AP019190 Escherichia coli strain M217 plasmid pM217_I1, complete sequence 1166-1197 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP033160 Escherichia coli strain CM IVRI KOL-1 plasmid pESBL-EA11p1ESCUM 19906-19937 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP048373 Escherichia coli strain 164 plasmid pC-F-163_B, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP024152 Escherichia coli strain 14EC033 plasmid p14EC033e, complete sequence 70164-70195 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP029119 Escherichia coli strain AR435 plasmid unnamed6 20475-20506 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NC_032099 Shigella dysenteriae 1 strain 92-9000 plasmid p92-9000, complete sequence 77748-77779 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP048312 Escherichia coli strain 32-4 plasmid p32-4_B, complete sequence 1132-1163 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP023900 Escherichia coli strain FDAARGOS_433 plasmid unnamed6, complete sequence 33616-33647 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP042248 Escherichia coli strain BCE049 plasmid pBCE049-2, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NC_019061 Escherichia coli plasmid pPWD4_103, complete sequence 1167-1198 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP018946 Escherichia coli strain Ecol_224 plasmid pEC224_2, complete sequence 40906-40937 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP023367 Escherichia coli strain 1428 plasmid p111, complete sequence 1239-1270 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP023957 Escherichia coli strain FDAARGOS_448 plasmid unnamed3, complete sequence 36960-36991 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP021882 Escherichia coli strain AR_0137 plasmid tig00001287_pilon, complete sequence 4429-4460 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP023362 Escherichia coli strain 1943 plasmid p85, complete sequence 713-744 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_KT868530 Salmonella enterica subsp. enterica serovar Enteritidis strain SE115 plasmid pSE115, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP025709 Escherichia coli strain YDC107 plasmid pYDC107_85 map unlocalized 16056-16087 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP029367 Escherichia coli strain WCHEC035148 plasmid pCMY42_035148, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP019996 Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1781 plasmid pSAN1-08-1092, complete sequence 1167-1198 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP031111 Escherichia coli strain AMSCJX02 plasmid pAMSC6, complete sequence 32802-32833 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP019215 Escherichia coli strain WCHEC050613 plasmid pI_050613, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP026778 Shigella dysenteriae strain 69-3818 plasmid unnamed1 57686-57717 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP022673 Shigella sonnei strain 866 plasmid p866, complete sequence 289-320 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NC_022885 Escherichia coli strain LK-NARMP plasmid pKPC-LKEc, complete sequence 1167-1198 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 CP053331 Salmonella enterica subsp. salamae serovar 60:z10:z39 strain 2011K-1889 plasmid unnamed2, complete sequence 16320-16351 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP040455 Escherichia coli strain UPEC132 plasmid unnamed2, complete sequence 88344-88375 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP015838 Escherichia coli strain MS6198 plasmid pMS6198D, complete sequence 50033-50064 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_LN890525 Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 2, complete sequence 57951-57982 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP034804 Escherichia coli strain 2009C-3554 plasmid p2009C-3554-1, complete sequence 28012-28043 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 MH430881 Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP-CRO, complete sequence 185134-185165 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP050758 Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-1, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 MH884653 Salmonella sp. strain Sa27 plasmid pSa27-TC-CIP, complete sequence 139694-139725 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 MH884654 Salmonella sp. strain Sa27 plasmid pSa27-HP, complete sequence 1801-1832 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP042936 Escherichia coli 042 plasmid p2-Ec-BERN-042, complete sequence 5638-5669 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_LT985248 Escherichia coli strain 720 plasmid RCS48_pI, complete sequence 1166-1197 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_LT985270 Escherichia coli strain 716 plasmid RCS56_p, complete sequence 14662-14693 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_LT985256 Escherichia coli strain 580 plasmid RCS49_p, complete sequence 1166-1197 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_LT985278 Escherichia coli strain 499 plasmid RCS68_p, complete sequence 20270-20301 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP031656 Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_03, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_MK758104 Escherichia coli strain 0126:B16 plasmid R16, complete sequence 1205-1236 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_MG904995 Escherichia coli strain 15OD0495 plasmid p15ODAR, complete sequence 25752-25783 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_MH430883 Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CRO, complete sequence 73806-73837 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_MN242251 Escherichia coli strain 5M plasmid pISV_IncI_CMY-42, complete sequence 22087-22118 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_MN702386 Escherichia coli strain LWY24J plasmid pLWY24J-4, complete sequence 758-789 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_MK416155 Escherichia coli strain AR24.2b plasmid pCMY-42, complete sequence 35297-35328 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_MF078004 Escherichia coli strain ET20160881 plasmid pET20160881, complete sequence 11989-12020 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_KY964068 Escherichia coli strain LV23529 plasmid pLV23529-CTX-M-8, complete sequence 78200-78231 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 MF554641 uncultured bacterium clone AA-104 plasmid pFEMG, complete sequence 87472-87503 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 MN816371 Escherichia coli strain A117 plasmid pA117-CTX-M-8, complete sequence 58362-58393 8 0.75
NZ_CP009125_6 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder 4033139-4033170 32 NZ_CP037994 Salmonella enterica subsp. enterica serovar Albany strain sg_wt5 plasmid psg_wt5 68695-68726 8 0.75
NZ_CP009125_8 8.8|4043869|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043869-4043900 32 MT771346 Gordonia phage MichaelScott, complete genome 47211-47242 8 0.75
NZ_CP009125_8 8.8|4043869|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043869-4043900 32 MH155867 Gordonia phage Easley, complete genome 45531-45562 8 0.75
NZ_CP009125_8 8.8|4043869|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043869-4043900 32 MK801729 Gordonia phage Clark, complete genome 46530-46561 8 0.75
NZ_CP009125_8 8.8|4043869|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043869-4043900 32 MG845393 Gordonia phage Beenie, complete genome 46767-46798 8 0.75
NZ_CP009125_8 8.9|4043929|32|NZ_CP009125|CRISPRCasFinder,CRT 4043929-4043960 32 NZ_CP028350 Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence 173166-173197 8 0.75
NZ_CP009125_8 8.9|4043929|32|NZ_CP009125|CRISPRCasFinder,CRT 4043929-4043960 32 NC_014258 Pantoea vagans C9-1 plasmid pPag3, complete sequence 401825-401856 8 0.75
NZ_CP009125_8 8.1|4043448|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043448-4043479 32 NZ_CP034472 Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence 56382-56413 9 0.719
NZ_CP009125_8 8.1|4043448|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043448-4043479 32 NZ_CP034477 Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence 124649-124680 9 0.719
NZ_CP009125_8 8.2|4043508|33|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043508-4043540 33 MH617742 Inoviridae sp. isolate ctbf14, complete genome 2728-2760 9 0.727
NZ_CP009125_6 6.4|4032779|30|NZ_CP009125|CRT 4032779-4032808 30 MN444870 Gordonia phage Syleon, complete genome 12477-12506 10 0.667
NZ_CP009125_6 6.4|4032779|30|NZ_CP009125|CRT 4032779-4032808 30 MT684599 Gordonia Phage Sephiroth, complete genome 12554-12583 10 0.667
NZ_CP009125_8 8.3|4043569|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT 4043569-4043600 32 NC_011564 Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG1 DNA, complete sequence 17230-17261 10 0.688

1. spacer 8.1|4043448|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to MT012729 (Salmonella phage vB_SenTO17, complete genome) position: , mismatch: 4, identity: 0.875

agctccgaccgacatgcgcttaaaggcggcga	CRISPR spacer
agctccgaccgacacgcgcttaaaggtggagc	Protospacer
**************.***********.** * 

2. spacer 7.1|4042263|32|NZ_CP009125|CRISPRCasFinder matches to KY271400 (Klebsiella phage 6 LV-2017, complete genome) position: , mismatch: 7, identity: 0.781

tttcagttcaaacaggccttgccagcagttga	CRISPR spacer
atttggctcaaacaggccttgccagccattgg	Protospacer
 **..*.******************* .***.

3. spacer 8.3|4043569|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to KT630649 (Salmonella phage SEN34, complete genome) position: , mismatch: 7, identity: 0.781

tgtaggcca---tataacaaatactcaaagataac	CRISPR spacer
---atgctattttataacaaatacaaaaagataac	Protospacer
   * **.*   ************  *********

4. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to MF679144 (Escherichia coli plasmid pBJ114-78, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

5. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NC_015965 (Salmonella enterica subsp. enterica serovar Typhimurium plasmid R621a, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

6. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025455 (Salmonella enterica subsp. enterica serovar Agona strain USDA-ARS-USMARC-76334 plasmid pSAG-76334, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

7. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KM409652 (Escherichia coli strain REL5382 plasmid pB15, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

8. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KP789019 (Escherichia coli strain WCHEC13-8 plasmid pCMY42, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

9. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NC_011752 (Escherichia coli 55989 plasmid 55989p, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgtg	Protospacer
***** ************** ***   .* * 

10. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024270 (Escherichia coli strain F8111-1SC3 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

11. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT754162 (Shigella dysenteriae 1 strain BU53M1 plasmid pBU53M1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

12. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT754167 (Shigella dysenteriae 1 strain 69-3818 plasmid p69-3818, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

13. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024226 (Escherichia coli O169:H41 strain 2014EL-1345-2 plasmid unnamed3) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

14. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to CP042952 (Escherichia coli strain D8-1 plasmid pD8-1_1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgtg	Protospacer
***** ************** ***   .* * 

15. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024468 (Shigella dysenteriae strain BU53M1 plasmid pBU53M1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

16. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034963 (Escherichia coli strain WCHEC020032 plasmid pCMY42_020032, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

17. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to MN007140 (Escherichia coli strain 91 plasmid p91_CMY-42, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

18. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026770 (Shigella flexneri Y strain 93-3063 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

19. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP054364 (Escherichia coli strain SCU-171 plasmid pSCU-171-1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgtg	Protospacer
***** ************** ***   .* * 

20. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026726 (Escherichia coli strain 266917_2 plasmid p266917_2_03, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

21. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NC_019000 (Escherichia coli plasmid pHUSEC41-2, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgtg	Protospacer
***** ************** ***   .* * 

22. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009052 (Escherichia coli NCCP15648 plasmid p15648-2, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

23. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP009053 (Escherichia coli NCCP15648 plasmid p15648-3, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgtg	Protospacer
***** ************** ***   .* * 

24. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP041959 (Escherichia coli strain EC2 plasmid pEC2_4, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

25. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024230 (Escherichia coli O25:NM strain 2014EL-1343-2 plasmid unnamed2) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

26. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NC_014477 (Escherichia coli plasmid pCT, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

27. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018993 (Escherichia coli strain Ecol_AZ147 plasmid pECAZ147_2, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

28. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to AP017892 (Escherichia coli plasmid pN23 DNA, complete sequence, strain: N23) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

29. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to AP017893 (Escherichia coli plasmid pS11 DNA, complete sequence, strain: S11) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

30. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034255 (Escherichia coli strain IVRI Kol CP4 plasmid pESBL-EA11) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

31. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to KY463221 (Escherichia coli plasmid pCMY-42, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

32. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021533 (Escherichia coli strain AR_0149 plasmid tig00000220, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

33. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP005999 (Escherichia coli B7A plasmid pEB1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

34. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_AP019190 (Escherichia coli strain M217 plasmid pM217_I1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

35. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP033160 (Escherichia coli strain CM IVRI KOL-1 plasmid pESBL-EA11p1ESCUM) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

36. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048373 (Escherichia coli strain 164 plasmid pC-F-163_B, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

37. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP024152 (Escherichia coli strain 14EC033 plasmid p14EC033e, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

38. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029119 (Escherichia coli strain AR435 plasmid unnamed6) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

39. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NC_032099 (Shigella dysenteriae 1 strain 92-9000 plasmid p92-9000, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

40. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP048312 (Escherichia coli strain 32-4 plasmid p32-4_B, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

41. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023900 (Escherichia coli strain FDAARGOS_433 plasmid unnamed6, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

42. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP042248 (Escherichia coli strain BCE049 plasmid pBCE049-2, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

43. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NC_019061 (Escherichia coli plasmid pPWD4_103, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

44. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP018946 (Escherichia coli strain Ecol_224 plasmid pEC224_2, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

45. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023367 (Escherichia coli strain 1428 plasmid p111, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgtg	Protospacer
***** ************** ***   .* * 

46. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023957 (Escherichia coli strain FDAARGOS_448 plasmid unnamed3, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

47. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP021882 (Escherichia coli strain AR_0137 plasmid tig00001287_pilon, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

48. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP023362 (Escherichia coli strain 1943 plasmid p85, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

49. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KT868530 (Salmonella enterica subsp. enterica serovar Enteritidis strain SE115 plasmid pSE115, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

50. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP025709 (Escherichia coli strain YDC107 plasmid pYDC107_85 map unlocalized) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

51. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP029367 (Escherichia coli strain WCHEC035148 plasmid pCMY42_035148, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

52. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019996 (Salmonella enterica subsp. enterica serovar Anatum str. USDA-ARS-USMARC-1781 plasmid pSAN1-08-1092, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

53. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP031111 (Escherichia coli strain AMSCJX02 plasmid pAMSC6, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

54. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP019215 (Escherichia coli strain WCHEC050613 plasmid pI_050613, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

55. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP026778 (Shigella dysenteriae strain 69-3818 plasmid unnamed1) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

56. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP022673 (Shigella sonnei strain 866 plasmid p866, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

57. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NC_022885 (Escherichia coli strain LK-NARMP plasmid pKPC-LKEc, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

58. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to CP053331 (Salmonella enterica subsp. salamae serovar 60:z10:z39 strain 2011K-1889 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

59. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP040455 (Escherichia coli strain UPEC132 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

60. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP015838 (Escherichia coli strain MS6198 plasmid pMS6198D, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

61. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LN890525 (Salmonella enterica subsp. enterica serovar Weltevreden strain 2511STDY5712385 plasmid 2, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

62. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP034804 (Escherichia coli strain 2009C-3554 plasmid p2009C-3554-1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

63. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to MH430881 (Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CIP-CRO, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

64. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP050758 (Salmonella enterica subsp. enterica serovar Indiana strain SI173 plasmid pSI173-1, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

65. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to MH884653 (Salmonella sp. strain Sa27 plasmid pSa27-TC-CIP, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

66. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to MH884654 (Salmonella sp. strain Sa27 plasmid pSa27-HP, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

67. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP042936 (Escherichia coli 042 plasmid p2-Ec-BERN-042, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

68. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT985248 (Escherichia coli strain 720 plasmid RCS48_pI, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

69. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT985270 (Escherichia coli strain 716 plasmid RCS56_p, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

70. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT985256 (Escherichia coli strain 580 plasmid RCS49_p, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

71. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LT985278 (Escherichia coli strain 499 plasmid RCS68_p, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

72. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP031656 (Escherichia coli strain UK_Dog_Liverpool plasmid pCARB35_03, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

73. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MK758104 (Escherichia coli strain 0126:B16 plasmid R16, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

74. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MG904995 (Escherichia coli strain 15OD0495 plasmid p15ODAR, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

75. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MH430883 (Salmonella enterica subsp. enterica serovar London strain 3-5 plasmid pSa44-CRO, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

76. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MN242251 (Escherichia coli strain 5M plasmid pISV_IncI_CMY-42, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

77. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MN702386 (Escherichia coli strain LWY24J plasmid pLWY24J-4, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

78. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MK416155 (Escherichia coli strain AR24.2b plasmid pCMY-42, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

79. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_MF078004 (Escherichia coli strain ET20160881 plasmid pET20160881, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

80. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_KY964068 (Escherichia coli strain LV23529 plasmid pLV23529-CTX-M-8, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

81. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to MF554641 (uncultured bacterium clone AA-104 plasmid pFEMG, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

82. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to MN816371 (Escherichia coli strain A117 plasmid pA117-CTX-M-8, complete sequence) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

83. spacer 6.10|4033139|32|NZ_CP009125|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP037994 (Salmonella enterica subsp. enterica serovar Albany strain sg_wt5 plasmid psg_wt5) position: , mismatch: 8, identity: 0.75

aaatcagccagcaactcatcagggtttacctc	CRISPR spacer
aaatccgccagcaactcatccgggaaggcgta	Protospacer
***** ************** ***   .* * 

84. spacer 8.8|4043869|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to MT771346 (Gordonia phage MichaelScott, complete genome) position: , mismatch: 8, identity: 0.75

acgacggatagtctctgtctgacgaacgcaac	CRISPR spacer
tgatcgtcgagtcactgtctgacgaacgcaac	Protospacer
  . **   **** ******************

85. spacer 8.8|4043869|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to MH155867 (Gordonia phage Easley, complete genome) position: , mismatch: 8, identity: 0.75

acgacggatagtctctgtctgacgaacgcaac	CRISPR spacer
tgatcgtcgagtcactgtctgacgaacgcaac	Protospacer
  . **   **** ******************

86. spacer 8.8|4043869|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to MK801729 (Gordonia phage Clark, complete genome) position: , mismatch: 8, identity: 0.75

acgacggatagtctctgtctgacgaacgcaac	CRISPR spacer
tgatcgtcgagtcactgtctgacgaacgcaac	Protospacer
  . **   **** ******************

87. spacer 8.8|4043869|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to MG845393 (Gordonia phage Beenie, complete genome) position: , mismatch: 8, identity: 0.75

acgacggatagtctctgtctgacgaacgcaac	CRISPR spacer
tgatcgtcgagtcactgtctgacgaacgcaac	Protospacer
  . **   **** ******************

88. spacer 8.9|4043929|32|NZ_CP009125|CRISPRCasFinder,CRT matches to NZ_CP028350 (Pantoea vagans strain PV989 plasmid pPV989-508, complete sequence) position: , mismatch: 8, identity: 0.75

gccctgaaaaaaatgggttgtgatgaccatgc-	CRISPR spacer
agggagaaaaaaatggcttttgatgacc-tgcg	Protospacer
.    *********** ** ******** *** 

89. spacer 8.9|4043929|32|NZ_CP009125|CRISPRCasFinder,CRT matches to NC_014258 (Pantoea vagans C9-1 plasmid pPag3, complete sequence) position: , mismatch: 8, identity: 0.75

gccctgaaaaaaatgggttgtgatgaccatgc-	CRISPR spacer
agggagaaaaaaatggcttttgatgacc-tgcg	Protospacer
.    *********** ** ******** *** 

90. spacer 8.1|4043448|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034472 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_3, complete sequence) position: , mismatch: 9, identity: 0.719

agctccgaccgacatgcgcttaaaggcggcga	CRISPR spacer
caagaccagcgacctgcgctgaaaggcggcga	Protospacer
 .   * * **** ****** ***********

91. spacer 8.1|4043448|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034477 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_3, complete sequence) position: , mismatch: 9, identity: 0.719

agctccgaccgacatgcgcttaaaggcggcga	CRISPR spacer
caagaccagcgacctgcgctgaaaggcggcga	Protospacer
 .   * * **** ****** ***********

92. spacer 8.2|4043508|33|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to MH617742 (Inoviridae sp. isolate ctbf14, complete genome) position: , mismatch: 9, identity: 0.727

atgcagatattgtaactaagcatcatattgcat	CRISPR spacer
aattgaataatgtaactaagcatcaaattgaag	Protospacer
*  ...*** *************** **** * 

93. spacer 6.4|4032779|30|NZ_CP009125|CRT matches to MN444870 (Gordonia phage Syleon, complete genome) position: , mismatch: 10, identity: 0.667

tggaacatggcgactccttacggtttctct	CRISPR spacer
gctgtcattgcgactccttacggtttggga	Protospacer
   . *** *****************    

94. spacer 6.4|4032779|30|NZ_CP009125|CRT matches to MT684599 (Gordonia Phage Sephiroth, complete genome) position: , mismatch: 10, identity: 0.667

tggaacatggcgactccttacggtttctct	CRISPR spacer
gctgtcattgcgactccttacggtttggga	Protospacer
   . *** *****************    

95. spacer 8.3|4043569|32|NZ_CP009125|PILER-CR,CRISPRCasFinder,CRT matches to NC_011564 (Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 plasmid pCFPG1 DNA, complete sequence) position: , mismatch: 10, identity: 0.688

tgtaggccatataacaaatactcaaagataac	CRISPR spacer
aaacgaagatataacaaatactgaaagttaag	Protospacer
 .  *.  ************** **** *** 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 808074 : 816831 11 Enterobacteria_phage(50.0%) integrase attL 806316:806329|attR 819197:819210
DBSCAN-SWA_2 1612976 : 1620880 7 Bacillus_phage(28.57%) NA NA
DBSCAN-SWA_3 2097066 : 2157360 57 Cronobacter_phage(46.34%) terminase,portal,head,plate,tail,protease,capsid,tRNA,holin,integrase attL 2090199:2090216|attR 2160765:2160782
DBSCAN-SWA_4 2344855 : 2354353 10 Tupanvirus(33.33%) tRNA NA
DBSCAN-SWA_5 2672764 : 2706150 45 Pseudomonas_phage(30.0%) terminase,head,plate,tail,protease,capsid,transposase,holin,integrase attL 2641513:2641527|attR 2676778:2676792
DBSCAN-SWA_6 3667760 : 3673173 6 Mycobacterium_phage(33.33%) NA NA
DBSCAN-SWA_7 3705422 : 3783922 60 Brevibacillus_phage(18.18%) tRNA,plate,bacteriocin,transposase NA
DBSCAN-SWA_8 4330055 : 4389578 65 Burkholderia_phage(35.0%) plate,tail,tRNA,capsid,transposase,holin,integrase attL 4321430:4321446|attR 4365795:4365811
DBSCAN-SWA_9 4438164 : 4446004 6 Dickeya_phage(50.0%) NA NA
DBSCAN-SWA_10 4681367 : 4760994 81 Salmonella_phage(60.0%) terminase,portal,head,plate,tail,protease,capsid,tRNA,integrase attL 4680549:4680566|attR 4758577:4758594
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage