CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number
NZ_CP007623	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0
NZ_CP007626	Bacillus pseudomycoides strain 219298 chromosome, complete genome	9 crisprs	DEDDh,cas3,csa3,cas14j,WYL,DinG,Cas14b_CAS-V-F	1	2	6
NZ_CP007625	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	0 crisprs	cas14j,RT	0	0	2
NZ_CP007621	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0
NZ_CP007624	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	0 crisprs	RT,cas14j	0	0	1
NZ_CP007622	Bacillus pseudomycoides strain 219298 plasmid unnamed, complete sequence	0 crisprs	NA	0	0	0

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

33489 : 82470

Bacillus_phage(42.86%)

transposase,integrase

attL 26511:26558|attR 72683:72730

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
26511:26558	attL	NA	NA	NA	NA
WP_040118698.1\|33489_34881_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_018783651.1\|35074_36241_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	4.9e-65	40.1
WP_018783652.1\|36761_37286_-	hypothetical protein	NA	NA	NA	NA
WP_018783653.1\|37536_38715_-	UDP-glucosyltransferase	Q0IKX4	Leucania_separata_nucleopolyhedrovirus	4.3e-08	23.9
WP_018783654.1\|39001_39859_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_040118699.1\|40213_41095_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.6e-45	41.0
WP_033799504.1\|41103_41400_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_018783672.1\|43225_43753_-	M23 family metallopeptidase	A0A0K2CNY2	Brevibacillus_phage	5.9e-10	44.8
WP_018783671.1\|44395_46024_+	FAD-dependent monooxygenase	NA	NA	NA	NA
WP_018783670.1\|46358_46502_+	hypothetical protein	NA	NA	NA	NA
WP_018783669.1\|46713_47658_+	phosphotransferase	NA	NA	NA	NA
WP_018783667.1\|48132_49569_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_123767132.1\|50547_50772_-	hypothetical protein	NA	NA	NA	NA
WP_040118700.1\|50882_51590_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	5.1e-41	41.7
WP_040118701.1\|52775_54158_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_003204763.1\|56522_56819_-	WXG100 family type VII secretion target	NA	NA	NA	NA
WP_040118703.1\|56954_57350_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_040118704.1\|57429_57819_-	DUF1433 domain-containing protein	NA	NA	NA	NA
WP_040118705.1\|57879_59076_+	hypothetical protein	NA	NA	NA	NA
WP_040118706.1\|59077_59461_+	hypothetical protein	NA	NA	NA	NA
WP_040118707.1\|59559_60369_-	DUF2837 family protein	NA	NA	NA	NA
WP_095995427.1\|61881_63241_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	4.8e-112	76.6
WP_018783627.1\|64184_64694_-	DUF4303 domain-containing protein	NA	NA	NA	NA
WP_029427989.1\|64977_65364_+	hypothetical protein	NA	NA	NA	NA
WP_040118710.1\|66121_66829_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	4.6e-42	41.3
WP_095995426.1\|66884_67604_-\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_018783622.1\|67613_68054_-	hypothetical protein	NA	NA	NA	NA
WP_018783621.1\|68287_69448_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_018783620.1\|69803_70787_+	hypothetical protein	NA	NA	NA	NA
WP_003209727.1\|70993_71881_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_003203261.1\|72817_73726_+	VanZ family protein	NA	NA	NA	NA
72683:72730	attR	NA	NA	NA	NA
WP_040118711.1\|74551_75724_+	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	1.9e-24	27.9
WP_040118712.1\|75972_76680_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.8e-41	42.2
WP_040118713.1\|76969_77935_-	zinc-binding dehydrogenase	NA	NA	NA	NA
WP_018783421.1\|78086_78536_-	DNA gyrase inhibitor	NA	NA	NA	NA
WP_018783422.1\|79223_79451_-	hypothetical protein	A0A290FZQ6	Caldibacillus_phage	1.4e-13	58.0
WP_018783423.1\|79920_80151_+	helix-turn-helix transcriptional regulator	A0A0S2MVM0	Bacillus_phage	9.7e-18	56.6
WP_040118714.1\|80151_80766_-	hypothetical protein	H0USY2	Bacillus_phage	8.9e-42	46.1
WP_040118715.1\|80704_81886_-	cell division protein FtsK	H0USY1	Bacillus_phage	1.7e-121	56.0
WP_040118716.1\|81986_82172_-	hypothetical protein	NA	NA	NA	NA
WP_040118717.1\|82173_82470_-	phage protein	H0USY0	Bacillus_phage	3.8e-14	44.3

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP007625

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

5469 : 131535

115

Bacillus_phage(52.78%)

transposase,holin,integrase,protease

attL 36242:36260|attR 80900:80915

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040118735.1\|5469_6597_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	S6AND0	Bacillus_phage	3.3e-175	81.9
WP_018783097.1\|7821_9522_-	hypothetical protein	NA	NA	NA	NA
WP_018783095.1\|10610_12335_+	hypothetical protein	NA	NA	NA	NA
WP_029427758.1\|12891_13188_+	hypothetical protein	H0USY0	Bacillus_phage	2.2e-14	47.7
WP_018783094.1\|13189_13375_+	hypothetical protein	NA	NA	NA	NA
WP_018783093.1\|13474_14656_+	cell division protein FtsK	A0A288WFS1	Bacillus_phage	1.1e-123	55.6
WP_018783092.1\|14594_15209_+	hypothetical protein	H0USY2	Bacillus_phage	5.0e-45	47.1
WP_003209566.1\|15214_15445_-	helix-turn-helix transcriptional regulator	S5MBY6	Brevibacillus_phage	8.5e-14	47.3
WP_029427756.1\|15906_16152_+	damage repair protein	A0A290FZQ6	Caldibacillus_phage	2.6e-13	58.0
WP_018767625.1\|18289_18733_+	hypothetical protein	NA	NA	NA	NA
WP_040118736.1\|18898_19606_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	2.5e-40	40.8
WP_018767554.1\|19787_20135_-	helix-turn-helix transcriptional regulator	A0A1B1P888	Bacillus_phage	2.7e-19	42.6
WP_018767556.1\|20897_21248_-	helix-turn-helix transcriptional regulator	A0A0U3SD25	Bacillus_phage	3.8e-21	47.3
WP_006097390.1\|21377_21599_+	helix-turn-helix transcriptional regulator	A0A0U3SLC2	Bacillus_phage	2.4e-05	55.6
WP_018783085.1\|21640_22414_+	phage repressor protein/antirepressor Ant	A0A2H4PQV4	Staphylococcus_phage	4.0e-71	52.9
WP_018783084.1\|23026_23227_+	hypothetical protein	NA	NA	NA	NA
WP_018783083.1\|23228_23426_+	hypothetical protein	NA	NA	NA	NA
WP_018783082.1\|23882_24731_+	replication protein	A0A1W6JNM1	Staphylococcus_phage	1.4e-32	43.2
WP_018783081.1\|24666_25473_+	ATP-binding protein	A0A1B0T6C3	Bacillus_phage	4.9e-88	63.7
WP_123767139.1\|25514_25718_+	hypothetical protein	NA	NA	NA	NA
WP_018767569.1\|26236_26623_+	hypothetical protein	A0A288WG73	Bacillus_phage	1.2e-49	73.8
WP_040118737.1\|26862_27843_+	lysozyme family protein	A0A223LKM8	Bacillus_phage	3.5e-32	41.8
WP_040118738.1\|27870_28089_+	hypothetical protein	A0A218KCJ1	Bacillus_phage	2.3e-13	52.5
WP_040118739.1\|28230_29079_+	M23 family metallopeptidase	A0A218KCJ1	Bacillus_phage	2.7e-28	42.1
WP_018783744.1\|29128_29554_+\|holin	phage holin family protein	A0A1B1P787	Bacillus_phage	9.1e-62	85.1
WP_040118740.1\|29553_30555_+	N-acetylmuramoyl-L-alanine amidase	J9PQX3	Bacillus_phage	6.9e-92	69.2
WP_040118738.1\|30582_30801_+	hypothetical protein	A0A218KCJ1	Bacillus_phage	2.3e-13	52.5
WP_080739967.1\|31056_31221_+	Fur-regulated basic protein FbpA	NA	NA	NA	NA
WP_018783749.1\|32838_33387_-	hypothetical protein	NA	NA	NA	NA
WP_040118741.1\|33652_34360_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	3.0e-41	42.2
WP_018783715.1\|34927_35440_+	cysteine hydrolase	NA	NA	NA	NA
WP_018783716.1\|35729_36110_-	hypothetical protein	NA	NA	NA	NA
36242:36260	attL	NA	NA	NA	NA
WP_040118742.1\|36370_37807_-\|transposase	IS4 family transposase	NA	NA	NA	NA
36242:36260	attL	NA	NA	NA	NA
WP_040118743.1\|38005_38200_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_040118696.1\|38199_38655_+	hypothetical protein	NA	NA	NA	NA
WP_018783699.1\|38899_39097_+	type IV secretion protein Rhs	NA	NA	NA	NA
WP_000566919.1\|39108_39501_+	hypothetical protein	NA	NA	NA	NA
WP_040118744.1\|39558_40131_-\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	1.8e-28	40.8
WP_018783697.1\|40608_41247_-	LysE family transporter	NA	NA	NA	NA
40567:40585	attR	NA	NA	NA	NA
WP_018783696.1\|41239_42007_-	YqcI/YcgG family protein	NA	NA	NA	NA
40567:40585	attR	NA	NA	NA	NA
WP_018783695.1\|42039_42513_-	YbaK/EbsC family protein	NA	NA	NA	NA
WP_040118712.1\|42886_43594_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.8e-41	42.2
WP_018783662.1\|44082_44733_+	type 1 glutamine amidotransferase-like domain-containing protein	NA	NA	NA	NA
WP_006097206.1\|45042_45405_+	DUF3796 domain-containing protein	NA	NA	NA	NA
WP_018783661.1\|45394_45595_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_006096975.1\|46705_47071_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_006096976.1\|47407_47581_-	hypothetical protein	NA	NA	NA	NA
WP_016113442.1\|47723_48341_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_040118745.1\|48464_50693_+	MMPL family transporter	NA	NA	NA	NA
WP_018783658.1\|50802_50967_-	DUF4021 family protein	NA	NA	NA	NA
WP_006096981.1\|51513_51777_+	transcriptional regulator SplA	NA	NA	NA	NA
WP_018783657.1\|51773_52802_+	spore photoproduct lyase	NA	NA	NA	NA
WP_029427994.1\|53529_53853_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_158318669.1\|54017_54218_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_018783638.1\|54133_54724_+\|transposase	IS3 family transposase	A0A2I6AZV9	Macacine_betaherpesvirus	1.7e-29	39.4
WP_018783637.1\|55184_56051_+	recombinase family protein	A0A219Y9V9	Aeromonas_phage	3.5e-36	47.5
WP_018783636.1\|56120_57059_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_018783635.1\|57132_57273_+	hypothetical protein	NA	NA	NA	NA
WP_018783634.1\|57474_57831_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_018783633.1\|58351_59410_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.0e-29	33.5
WP_018783632.1\|60289_62506_+	hypothetical protein	NA	NA	NA	NA
WP_018783631.1\|62785_62998_+	hypothetical protein	NA	NA	NA	NA
WP_018783630.1\|63062_63980_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_123767136.1\|64724_65288_+	hypothetical protein	NA	NA	NA	NA
WP_040118747.1\|65618_66875_-	MFS transporter	NA	NA	NA	NA
WP_018783416.1\|66867_67476_-	ArsR family transcriptional regulator	NA	NA	NA	NA
WP_018783414.1\|69229_69733_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_029427896.1\|71611_72493_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.5e-47	42.5
WP_018783411.1\|73311_73773_+	CarD family transcriptional regulator	NA	NA	NA	NA
WP_000738547.1\|74320_74467_+	BC1881 family protein	NA	NA	NA	NA
WP_018767989.1\|74765_74999_+	hypothetical protein	NA	NA	NA	NA
WP_003202925.1\|75238_75472_+	YuzF family protein	NA	NA	NA	NA
WP_003202922.1\|75539_75815_-	hypothetical protein	NA	NA	NA	NA
WP_018783410.1\|76213_77068_-	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_018783408.1\|77962_78892_-	hypothetical protein	NA	NA	NA	NA
WP_018783407.1\|79086_79716_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_123767137.1\|79769_80648_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_018783405.1\|81407_82802_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_001120967.1\|82938_83271_-	DUF1904 family protein	NA	NA	NA	NA
WP_018783404.1\|83993_85163_+	serine hydrolase	A0A1D8EXR7	Mycobacterium_phage	1.8e-22	28.3
WP_123767138.1\|85300_85768_+	recombinase family protein	A0A1V0E035	Clostridioides_phage	3.5e-06	39.8
WP_123767141.1\|85971_87273_+	teichoic acid transporter	NA	NA	NA	NA
WP_018783400.1\|87716_88094_+	YxeA family protein	A0A0K2CYS5	Paenibacillus_phage	2.4e-13	39.5
WP_018783399.1\|88238_89669_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_018783398.1\|90090_90543_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_018783396.1\|91144_91939_+	nucleoside triphosphate hydrolase	NA	NA	NA	NA
WP_018767729.1\|92439_93678_+	cytochrome P450	A0A2I2L481	Orpheovirus	1.2e-05	27.8
WP_018783533.1\|96048_96663_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_018783532.1\|96863_100079_+	cytochrome P450	V5UQK0	Mycobacterium_phage	1.1e-77	35.9
WP_018783531.1\|100175_101615_+	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA
WP_018783529.1\|102025_103207_+	DUF3533 domain-containing protein	NA	NA	NA	NA
WP_018783528.1\|103520_105050_+	cardiolipin synthase	NA	NA	NA	NA
WP_018783527.1\|105201_105657_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_016114392.1\|105691_106063_+	ATP synthase subunit I	NA	NA	NA	NA
WP_018783526.1\|106669_107218_+	VanZ family protein	NA	NA	NA	NA
WP_018783525.1\|107474_107909_+	hypothetical protein	NA	NA	NA	NA
WP_040118787.1\|108071_108269_+	hypothetical protein	NA	NA	NA	NA
WP_006097496.1\|108308_109190_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.0e-46	41.7
WP_033799504.1\|109198_109495_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_018783523.1\|110490_110817_-	hypothetical protein	NA	NA	NA	NA
WP_029427931.1\|110809_111046_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_018783518.1\|113569_114115_+	DUF3967 domain-containing protein	NA	NA	NA	NA
WP_040118748.1\|115758_117297_+	alveolysin	NA	NA	NA	NA
WP_018783364.1\|118140_118644_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_018783362.1\|119722_120343_+	recombinase family protein	A0A0F7LA37	Escherichia_phage	4.5e-09	32.1
WP_018783361.1\|120442_121102_+	serine/threonine protein kinase	NA	NA	NA	NA
WP_051091469.1\|121198_121510_-	hypothetical protein	NA	NA	NA	NA
WP_018783359.1\|122030_122396_-	YxeA family protein	NA	NA	NA	NA
WP_018783358.1\|122495_124352_-	ABC transporter permease	NA	NA	NA	NA
WP_018783357.1\|124356_125130_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.9e-34	38.4
WP_018783356.1\|125698_126589_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	8.2e-20	25.4
WP_080739953.1\|126715_126886_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_018783355.1\|127859_128492_-	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_018783354.1\|128947_129937_+	ketoacyl-ACP synthase III	NA	NA	NA	NA
WP_018783353.1\|130098_131535_+\|transposase	IS4 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

166305 : 219229

Streptococcus_phage(25.0%)

transposase,integrase

attL 151123:151149|attR 226891:226917

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
151123:151149	attL	NA	NA	NA	NA
WP_018783211.1\|166305_167184_+\|transposase	Rpn family recombination-promoting nuclease/putative transposase	NA	NA	NA	NA
WP_040118790.1\|167631_168792_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_040118755.1\|169146_170130_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA
WP_040118756.1\|170329_171715_-	chitosanase	NA	NA	NA	NA
WP_040118757.1\|172565_173774_-	MFS transporter	NA	NA	NA	NA
WP_040118758.1\|174155_175430_+	aspartate aminotransferase family protein	B5LJF5	Mycobacterium_phage	7.1e-09	25.2
WP_040118759.1\|175426_176374_+	inorganic polyphosphate kinase	NA	NA	NA	NA
WP_018783202.1\|176351_177398_+	alcohol dehydrogenase catalytic domain-containing protein	E3SJ82	Synechococcus_phage	4.5e-09	28.2
WP_029427806.1\|178110_179049_+	class A beta-lactamase	A0A1B0VBP7	Salmonella_phage	2.0e-56	44.2
WP_080739956.1\|180108_181266_+	acyltransferase	NA	NA	NA	NA
WP_040118760.1\|182031_182691_-	L-serine ammonia-lyase, iron-sulfur-dependent, subunit beta	NA	NA	NA	NA
WP_018783196.1\|183062_183974_-	DMT family transporter	NA	NA	NA	NA
WP_018783195.1\|183970_185203_-	5-aminolevulinate synthase	V5LQ39	Emiliania_huxleyi_virus	1.1e-38	30.5
WP_040118761.1\|186655_186961_+	monooxygenase	NA	NA	NA	NA
WP_018783191.1\|187368_188598_-	serine hydrolase	NA	NA	NA	NA
WP_123767142.1\|189728_190403_+\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	2.6e-66	64.6
WP_018783189.1\|190708_190891_+	hypothetical protein	NA	NA	NA	NA
WP_018783188.1\|191517_192948_+	alanine:cation symporter family protein	NA	NA	NA	NA
WP_040118762.1\|193483_194470_+	glutaminase	NA	NA	NA	NA
WP_018783186.1\|194708_196025_+	sensor histidine kinase	NA	NA	NA	NA
WP_018783185.1\|196029_196974_+	response regulator	NA	NA	NA	NA
WP_018783184.1\|197101_197809_-\|transposase	IS6 family transposase	A0A1X9I6C6	Streptococcus_phage	1.4e-43	44.4
WP_018783183.1\|198377_198602_+	hypothetical protein	NA	NA	NA	NA
WP_018783181.1\|200130_200916_+	3-hydroxybutyryl-CoA dehydratase	NA	NA	NA	NA
WP_040118763.1\|203898_204780_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.3e-45	41.4
WP_018783218.1\|205906_206563_-	hypothetical protein	NA	NA	NA	NA
WP_018783220.1\|208370_208871_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_002107182.1\|210057_210396_-	hypothetical protein	NA	NA	NA	NA
WP_018783222.1\|210400_210598_-	helix-turn-helix transcriptional regulator	A0A142LP09	Marinitoga_camini_virus	1.6e-05	39.7
WP_018783223.1\|210891_212325_+\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_018783224.1\|213203_213878_-	S-layer homology domain-containing protein	NA	NA	NA	NA
WP_018767543.1\|214653_215298_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA
WP_018783226.1\|216039_217704_+	peptidase M4 family protein	NA	NA	NA	NA
WP_018783227.1\|218203_219229_+\|transposase	IS1595-like element ISBth19 family transposase	NA	NA	NA	NA
226891:226917	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP007626

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007626_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_1

411561-411709

Orphan

Consensus_repeat	Method
TCAATAATAAAGTTGTTTAATTT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP007626_1

>merge|NZ_CP007626|1|411561-411709|PILER-CR
TGTAAGGTGATAATAAAGTTATTTAATTTCGATATAAATATATAAGAGCCTTGCTACATTTTTTTGTAGTAAGGCTCTTTAAAGTTGTTTAATTTCTATCCATTTAAATGTATTGGTACTCAAAAATCAATAATAAAGTTGTTTAATTC

>NZ_CP007626|1|1|411561-411709|PILER-CR
TGTAAGGTGATAATAAAGTTATTTAATTT	CGATATAAATATATAAGAGCCTTGCTACATTTTTTTGTAGTAAGGCTCT
TTAAAGTTGTTTAATTTCTATCCATTTAA	ATGTATTGGTACTCAAAAATCAATAATAAAG
TTGTTTAATTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_018781875.1\|409589_410504_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|377216
NZ_CP007626.1\|WP_018781876.1\|410906_411416_-\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981
NZ_CP007626.1\|WP_018781867.1\|405169_405364_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018781865.1\|403854_404238_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018781877.1\|411885_413418_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238121
NZ_CP007626.1\|WP_029427282.1\|414678_416070_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379166
NZ_CP007626.1\|WP_040118889.1\|404354_404945_-\|DUF4030-domain-containing-protein	unknown	unknown	gnl\|CDD\|289964
NZ_CP007626.1\|WP_040118890.1\|419868_420531_-\|bacillithiol-biosynthesis-deacetylase-BshB2	unknown	unknown	gnl\|CDD\|188515
NZ_CP007626.1\|WP_040118891.1\|423865_424645_+\|DUF817-domain-containing-protein	unknown	unknown	gnl\|CDD\|377545
NZ_CP007626.1\|WP_018781874.1\|408773_409235_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|187753
NZ_CP007626.1\|WP_018767572.1\|402569_403130_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018781873.1\|408207_408747_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP007626.1\|WP_003198872.1\|422505_422733_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018781869.1\|405575_406526_-\|tyrosine-type-recombinase/integrase	unknown	unknown	gnl\|CDD\|227308
NZ_CP007626.1\|WP_018781578.1\|421145_422471_+\|ArsB/NhaD-family-transporter	unknown	unknown	gnl\|CDD\|238536
NZ_CP007626.1\|WP_018781577.1\|422971_423532_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP007626.1\|WP_000407035.1\|420546_420897_-\|YojF-family-protein	unknown	unknown	gnl\|CDD\|378061
NZ_CP007626.1\|WP_018781871.1\|407324_407522_+\|DUF3955-domain-containing-protein	unknown	unknown	gnl\|CDD\|379038
NZ_CP007626.1\|WP_006095483.1\|419475_419733_-\|YuzF-family-protein	unknown	unknown	gnl\|CDD\|371265
NZ_CP007626.1\|WP_123767147.1\|417185_417905_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|271321

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_018781875.1\|409589_410504_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|377216	pfam04072, LCM, Leucine carboxyl methyltransferase. Family of leucine carboxyl methyltransferases EC:2.1.1.-. This family may need divides a the full alignment contains a significantly shorter mouse sequence.	3.11062e-61
NZ_CP007626.1\|WP_018781876.1\|410906_411416_-\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	2.98605e-14
NZ_CP007626.1\|WP_018781877.1\|411885_413418_-\|hypothetical-protein	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	0.00028487
NZ_CP007626.1\|WP_029427282.1\|414678_416070_-\|hypothetical-protein	gnl\|CDD\|379166	pfam13402, Peptidase_M60, Peptidase M60, enhancin and enhancin-like. This family of peptidases contains a zinc metallopeptidase motif (HEXXHX(8,28)E) and possesses mucinase activity. It includes the viral enhancins as well as enhancin-like peptidases from bacterial species. Enhancins are a class of metalloproteases found in some baculoviruses that enhance viral infection by degrading the peritrophic membrane (PM) of the insect midgut. Bacterial enhancins are found to be cytotoxic when compared to viral enhancin, however, suggesting that the bacterial enhancins do not enhance infection in the same way as viral enhancin. Bacterial enhancins may have evolved a distinct biochemical function. These bacterial domains are peptidases targetting host glycoproteins and thus probably play an important role in successful colonisation of both vertebrate mucosal surfaces and the invertebrate digestive tract by both mutualistic and pathogenic microbes. This family has been augmented by a merge with the sequences in the Enhancin Pfam family.	7.48553e-60
NZ_CP007626.1\|WP_040118889.1\|404354_404945_-\|DUF4030-domain-containing-protein	gnl\|CDD\|289964	pfam13222, DUF4030, Protein of unknown function (DUF4030). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 164 and 197 amino acids in length.	9.84636e-71
NZ_CP007626.1\|WP_040118890.1\|419868_420531_-\|bacillithiol-biosynthesis-deacetylase-BshB2	gnl\|CDD\|188515	TIGR04000, thiol_BshB2, bacillithiol biosynthesis deacetylase BshB2. Members of this protein family are BshB2 (YojG), an enzyme of bacillithiol biosynthesis; either BshB1 (YpjG) or BshB2 must be present, and often both are present. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	7.09629e-119
NZ_CP007626.1\|WP_040118891.1\|423865_424645_+\|DUF817-domain-containing-protein	gnl\|CDD\|377545	pfam05675, DUF817, Protein of unknown function (DUF817). This family consists of several bacterial proteins of unknown function.	4.69012e-124
NZ_CP007626.1\|WP_018781874.1\|408773_409235_-\|SAM-dependent-methyltransferase	gnl\|CDD\|187753	cd09281, UPF0066, Escherichia coli YaeB and related proteins. Uncharacterized protein family UPF0066. This domain includes Escherichia coli YeaB, Archeoglobus fulgidus AF0241, and Agrobacterium tumefaciens VirR. Proteins with this domain are probable S-adenosylmethionine-dependent methyltransferases but they have not been functionally characterized and the substrate is unknown.	9.53653e-45
NZ_CP007626.1\|WP_018781873.1\|408207_408747_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.38315e-15
NZ_CP007626.1\|WP_018781869.1\|405575_406526_-\|tyrosine-type-recombinase/integrase	gnl\|CDD\|227308	COG4974, XerD, Site-specific recombinase XerD [DNA replication, recombination, and repair].	2.96828e-13
NZ_CP007626.1\|WP_018781578.1\|421145_422471_+\|ArsB/NhaD-family-transporter	gnl\|CDD\|238536	cd01116, P_permease, Permease P (pink-eyed dilution). Mutations in the human melanosomal P gene were responsible for classic phenotype of oculocutaneous albinism type 2 (OCA2). Although the precise function of the P protein is unknown, it was predicted to regulate the intraorganelle pH, together with the ATP-driven proton pump. It shows significant sequence similarity to the Na+/H+ antiporter NhaD from Vibrio parahaemolyticus. Both proteins belong to ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life. A typical ArsB/NhaD permease contains 8-13 transmembrane domains.	1.07688e-149
NZ_CP007626.1\|WP_018781577.1\|422971_423532_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	1.33388e-26
NZ_CP007626.1\|WP_000407035.1\|420546_420897_-\|YojF-family-protein	gnl\|CDD\|378061	pfam08830, DUF1806, Protein of unknown function (DUF1806). This is a bacterial family of uncharacterized proteins. The structure of one of the proteins in this family has been solved and it adopts a beta barrel-like structure.	2.32344e-75
NZ_CP007626.1\|WP_018781871.1\|407324_407522_+\|DUF3955-domain-containing-protein	gnl\|CDD\|379038	pfam13127, DUF3955, Protein of unknown function (DUF3955). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 68 and 87 amino acids in length. There are two completely conserved residues (G and E) that may be functionally important.	2.40387e-12
NZ_CP007626.1\|WP_006095483.1\|419475_419733_-\|YuzF-family-protein	gnl\|CDD\|371265	pfam10842, DUF2642, Protein of unknown function (DUF2642). This family of proteins with unknown function appear to be restricted to Bacillus spp.	9.49474e-24
NZ_CP007626.1\|WP_123767147.1\|417185_417905_+\|hypothetical-protein	gnl\|CDD\|271321	cd14951, NHL-2_like, NHL repeat domain of NHL repeat-containing protein 2 and similar proteins. NHL repeat-containing protein 2 (NHLRC2) and related bacterial proteins; members of this eukaryotic and bacterial family are uncharacterized, the NHL repeat domain is found C-terminally of a thioredoxin domain. The NHL (NCL-1, HT2A and LIN-41) repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures.	0.00151222

>NZ_CP007626.1|WP_018781876.1|410906_411416_-|DinB-family-protein
MNKFVNDKFYETRNNLLKEITLLSDAQFNSKPDINKWSIAQVCHHLVLLDEAAIKVISFGLKEIDSTQKECQEIHSILLDRTKKFTAPKVVEPSLEPFEVQQMIDLLNDSRKKLMTFLSTIEDVSILAKKSVKHPALGELLLDQWIELIYLHEQRHIEQIKEIKLLFES
>NZ_CP007626.1|WP_018781875.1|409589_410504_-|class-I-SAM-dependent-methyltransferase
MKKGESSLTSLISAFGRSYHSQFDTPKIFNDYIAKDLISQKEFNNIKDNMVQGIHFFNKDIAQKFKGNTEEILKWITQIQLSPTPLARAAYCEKVLINEVMLGLKQYVILGAGLDTFCFRHPELENTLEIFEIDYPTTQEFKKNRLDGANFKVPSNLHFISMDFTKKFSYQNLRDGGFGNKKTFFSLLGVSYYLTKEEISSLIDNLFAKVPSGSSIVFDYADEKLFEEKGIFNRVENMVKMASASGEPMKSCFSYYEIERMLEKSGLLIYEHLSPDKINELYFDDRKDYLSSFETIHYIHAVKK
>NZ_CP007626.1|WP_018781874.1|408773_409235_-|SAM-dependent-methyltransferase
MEITIKPVAYVHNSREELKDDNWGCVVSVIELTDELNESALQGIEDFSHLEIIFYFDKVPDDKVQYGARHPRNNLDFPKVRIFSQRGKNRPNKLGVTTVQLIEHTGNKLVVKGLDAIDGTPIIDIKPVMKEFLPKNEIKQANWSTVLMKDYWK
>NZ_CP007626.1|WP_018781873.1|408207_408747_-|GNAT-family-N-acetyltransferase
MSTFQKNILASYNGIHIRVFDSKKDDVEQLTRVLNKSYKKLADLGFNYLASHQDSSITLERINKALCLVAIRDNKIIGSISYYSPKSNKGCNWYNKGNVATIGQFGIHPSYQSMGIGRKLIELVEELAIKEGIEELVLDTAEGASHLIKYYGDKGYRFIEYINWEITNYRSVVLSKKLN
>NZ_CP007626.1|WP_018781871.1|407324_407522_+|DUF3955-domain-containing-protein
MKKYILTLIPFILGIGCVVSYNTIGSKVASDGTLVEPFYLLPMGYSFLAIGIISLFVSKMNKVNK
>NZ_CP007626.1|WP_018781869.1|405575_406526_-|tyrosine-type-recombinase/integrase
MPTKEFQDTVQHFSSFLLNKGRKPSTIKRYAYDIEDFGHWLQKSKKLPTHNIWTTLGTKDYEAYFYDLKQQRRYSDKTMHRVYIVLNRMYQYLQLPNPLEEMQFSIQPNRALRDGDFISKEEEKRLKYILTSLEELTEKQRSVRSVLMDRNISIVHLFVNNGLSLQELVSLQMKHVHFENNTISVPKIVGIERTILLTEDDKKRLFNYYKVIPEPVRPKYHSNDPLFVAFDFTRNTYHWSYENDAPKALTEIAVQKMIRLEVARANLRKGISAQHLRNTFILRLIEHHVSEEEIIKQVGFKSKLSLKRYYDYINQK
>NZ_CP007626.1|WP_018781867.1|405169_405364_-|hypothetical-protein
MNKGDAILRLLMEMKFEIKEVKEQMEQMQKSLENIEKQSLTKQSEASSTVSKGNRDWKYPSKMK
>NZ_CP007626.1|WP_040118889.1|404354_404945_-|DUF4030-domain-containing-protein
MKKGKGLLLPLLLATLLSACQQNDKEEAKSEESKVMDTIMETIDEKDFLSASMSDTPRTVDLEIADTVNTSKVKKEINARLKNQDIRPYTINVSQRNMDIVKIENRWDNIYSYIYEELFQKKGYKGFSMRAYIELNQPTPFAIYTPINSTDTGAKELGKKIEKEIDNLLKTPQAQKWIEDDLYTIEVYSQDNQRIN
>NZ_CP007626.1|WP_018781865.1|403854_404238_+|hypothetical-protein
MCGGTSLRSSNFEGNTQQDTKINPLAMNIYNFGEMSFSNYKWIDSGTSFYLPQSVQVEPKTKTSGLAVQIYKDEVPYQEYRVKGSFSSGLNIPIAYLLDGYNNYYQLRLKNYGGGTIYLYGGQVYYK
>NZ_CP007626.1|WP_018767572.1|402569_403130_+|hypothetical-protein
MFKKLVVGALATGIALTGGIGAASADTVKPVSSPNKATETAYSENQQYISDRIESIVENTSEVERPFVPNFSDKNNLIGEKAAAAFDWRYSGNYNFSTSIQVKKTISVANNGNIGVGIQNNKNFNFKVVVKSLSSGNTVTHTVKGGPMSGGDYVTDFFGPMKAGDYVVTLVNTDGSWHQGLVWLGW
>NZ_CP007626.1|WP_018781877.1|411885_413418_-|hypothetical-protein
MSQNVRIANLPSYKQTKTLKECNELLSSILEIKQISAFQWLFEKGNYYMEIYLSFVDGNGDSIDSDLCNCIETCIPWKYLNNDESLWFYTQLRLDIARAFNWDMFDIQSDNIYAPIHTHDLKPLYKLSSEEKKQSVPVSLLSYKIAEPTVLYRQKGILCAKDNARKRYSNLVHLFEDKFIHTYDGGMYVSDIPGIQIREGSSLHCIDEITDIGREMIKRDDDSVLLADGPLVEGYRAHVAICNLYPLNLIDILPLSPPFTWISENENKFIALVPRKDLHEKTHFDIKPATVKGTKLRISEEAVQSHPWLNDALNPEKYHLIEVDLDLRKWKPVLTQKDFLKNIHLSESGYIEFMVYSQQENCIYIMDGSRIGCIELTNQSFQWITELGGDLKVYCLSVSPCGNYIAIGGIADDRYSPSSFSLIHAHTGKFIFRLPVFKTFHSAIYSIRWHPDSQWLVLGLANGTLIELSLDGEARYFKALKGSISHICFNQNMMYVTGNEKVIRAWKVEE
>NZ_CP007626.1|WP_029427282.1|414678_416070_-|hypothetical-protein
MNKRKNRKLQKPMKVFMASAVLTTTLFTSMTVNGLNIHAETTQTQVQYEERTFELPSTGHYMGEAARERRSEQRNYTPTGIYVKPNEQVTIEVSGLSGLDKLGATIGTNEYDKEGGKAFRLSPGSNTISSPNGGLLGFDNCEGKGTVKVKVTQGGSPVPFFELGKHTKVDWIAMMDKYPDAPAVQLKSKRAVLTVTRDSAKKYITDQDPVPLLKKYDEMILAQDKISGLSETSSNPLHRSTRRLWAFVENPNNPPGMYMYAGRDGVVFTTAYDAIKSALNANEFGWGQMHEAGHTRQQYPWTWDGVVEVNVNIYSLVAQKQLFPAQPTRLEKEGDYDRAFQYLKQTDKEYENINDPFVKVVMFWQLHLAYGEDFYPNLHKLYRELPKDKLPETNEDKIQAFIYNTSKVAKQNLLPFFDQWGLKASQETRKKVEALNYPTLTAPIWEATDAKPVKPTAAYGPRK
>NZ_CP007626.1|WP_123767147.1|417185_417905_+|hypothetical-protein
MVMKFFKNMVIFSVFTILLSSCNNLSSKTGCPDAKIEWVDMVMIQDIKYQHHFPDPIDENVPITIEKGEKLGKVTYKMVNNACINHKMKNGDAAFLDKSTPIYEIKGYPSALVVTANDRVYVADTNIKAKTAGELYPMDKLVKNIHIESTEDGRSIHTFSQLSKDKFLHAWSTLKLEDIETLNNNGDHEGNRVFLEIELNNGVTFREVYWSESNTFHSGVVGNKEIKDVIGYELSNLKK
>NZ_CP007626.1|WP_006095483.1|419475_419733_-|YuzF-family-protein
MYYSYEDVFGYFRDGYEISGDVVALVDPYVIQTLQSIVGKRIVVETIRGSVNGTLRSVKPDHLVLEEKEVPVFVRIQQIVWFTPE
>NZ_CP007626.1|WP_040118890.1|419868_420531_-|bacillithiol-biosynthesis-deacetylase-BshB2
MERHVLVVFPHPDDESFAAGGTISLLRRQGVPVTYACGTLGQMGRNMGKNVFANRETIPNIREKELKDACEAMGIEDLRMLGFHDKTLEFEDVDFVADKIETVIRDVQPSRIITFYPEHGVHPDHDAFGRATVRAVSRMPKETRPVIHAVAITKNREEVLGEPDVVNNISEAFEQKLAALRAHRSQTEAMLEETEVKLQSKDAATLKWLQIEQFWTYKWE
>NZ_CP007626.1|WP_000407035.1|420546_420897_-|YojF-family-protein
MEIVKDSAVIQHEIERFVNKDVYIHLETTNGAYASHFNEKMMTVGAFIRNAIIRFERGKITGTNPYRVGLKMDHGWVYAEGITHWEVDEQDRLLLAGHDNKGRLAVALELSLTPFK
>NZ_CP007626.1|WP_018781578.1|421145_422471_+|ArsB/NhaD-family-transporter
MEHSAHEVANWQYYFAIAVFLVTYGFIISEKLNRAVIALFGAAIMIIFGIVDLHTAFTSHIQWETITLLIGMMILVHITSQSGVFEYVAIKAAKAAGGKPIRILLFLSLLTAVGSAFLDNVTTVLLIVPVTLSITRILKVQPVPYLISEVLFSNIGGTATLIGDPPNIMIGSANKHLDFNAFLLNLTPIVLIISIVTLGIIYLMYRNKLKTTSEQIAKLMALNEKDYIRDRSLLLKSLSILGLTILGFVLHSIIHVDAAVIAMTGATLLMLIGVKQHELEDVFAHVEWVTIFFFAGLFILVGGLIDIGLISSLAKEVIDITNGDIGFAAILILWVSGAASATIDNIPFVATMIPLIQDLASGLGLSVDSPQIEVLWWALSLGACLGGNGTLIGASANVVVAGIANREGHGFSYLDFLKIGLPLTIIALLLSHAYIYLRYLM
>NZ_CP007626.1|WP_003198872.1|422505_422733_-|hypothetical-protein
MNLEKPKPVNEEIAELKELVKELHGSVHQLQSEVQQLRHEKPVVEVRKGVQLSPTIVGQIGGMILGALAIIGIFW
>NZ_CP007626.1|WP_018781577.1|422971_423532_-|GNAT-family-N-acetyltransferase
MNTKLNNLFLGENIKLSAIRAEDIEQMAIWQEDSEYLRNVDTDIAILQSLHEIKENELLIGRKSNSVSFMLRTIQDDSLIGFVALHSIEWNNRAGLLAIGIGDKNYRGKGYGTEGLRLILKYAFYELNLHRVGLDVISYNKSAIEVYKKVGFKVEGSMREAVQRDGKSFDRIIMGILRNEWIAMLE
>NZ_CP007626.1|WP_040118891.1|423865_424645_+|DUF817-domain-containing-protein
MFYIKQLLFFAYQQVLSCIFPVVIFVTLALSKFISIPGLYRYDFILIVCLLMQYIMYKTGMETKDELKVIAVFHLIGLLLEIYKVHFGSWSYPEEAYSKIFGVPLYSGFMYASVASYICQAWRRLHLQMHRWPKAMWTVPLGAMIYLNFFTNHFVYDFRWVLTALLFIVFFRTFVQFSVQNVTYTMPLVLSFFLIGFFIWIAENIATFFGAWQYPNQREAWSLVHIGKISSWFLLVVISIMIVAQLKHLKEHKNKPTSI

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Crispr_ID: NZ_CP007626_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_2

1327329-1327429

Orphan

Consensus_repeat	Method
CCTGTTCCTGAACAATGTTTACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007626_2

>merge|NZ_CP007626|2|1327329-1327429|CRISPRCasFinder
CCTGTTCCTGAACAATGTTTACACGCTTGACGATTTACAATACGACCAAATGGTGTATTTTGTTCTACGCTCACTTGACCTGTTCCTGAACAATGTTTACA

>NZ_CP007626|2|1|1327329-1327429|CRISPRCasFinder
CCTGTTCCTGAACAATGTTTACA	CGCTTGACGATTTACAATACGACCAAATGGTGTATTTTGTTCTACGCTCACTTGA
CCTGTTCCTGAACAATGTTTACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_003200623.1\|1330678_1331710_-\|heat-inducible-transcriptional-repressor-HrcA	unknown	unknown	gnl\|CDD\|234621
NZ_CP007626.1\|WP_016116369.1\|1322767_1323433_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_CP007626.1\|WP_006095985.1\|1325832_1326771_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|225173
NZ_CP007626.1\|WP_003200617.1\|1333546_1335370_-\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP007626.1\|WP_003200639.1\|1321815_1322259_-\|GatB/YqeY-domain-containing-protein	unknown	unknown	gnl\|CDD\|370480
NZ_CP007626.1\|WP_000048061.1\|1322274_1322448_-\|30S-ribosomal-protein-S21	unknown	unknown	gnl\|CDD\|234707
NZ_CP007626.1\|WP_018782547.1\|1331843_1332980_-\|oxygen-independent-coproporphyrinogen-III-oxidase	unknown	unknown	gnl\|CDD\|236309
NZ_CP007626.1\|WP_001274011.1\|1337227_1337485_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP007626.1\|WP_003200627.1\|1328136_1329972_-\|chaperone-protein-DnaK	unknown	unknown	gnl\|CDD\|234715
NZ_CP007626.1\|WP_003208528.1\|1319115_1320075_-\|PhoH-family-protein	unknown	unknown	gnl\|CDD\|224616
NZ_CP007626.1\|WP_018782546.1\|1335569_1335923_-\|DUF3679-domain-containing-protein	unknown	unknown	gnl\|CDD\|315165
NZ_CP007626.1\|WP_006095982.1\|1335942_1337046_-\|GPR-endopeptidase	unknown	unknown	gnl\|CDD\|235078
NZ_CP007626.1\|WP_018782548.1\|1324936_1325686_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NZ_CP007626.1\|WP_040119623.1\|1316727_1318872_-\|HD-family-phosphohydrolase	unknown	unknown	gnl\|CDD\|224397
NZ_CP007626.1\|WP_018782549.1\|1320078_1321278_-\|sporulation-protein-YqfD	unknown	unknown	gnl\|CDD\|274335
NZ_CP007626.1\|WP_018765852.1\|1329998_1330568_-\|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl\|CDD\|237622
NZ_CP007626.1\|WP_003200619.1\|1333034_1333409_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP007626.1\|WP_003200641.1\|1321411_1321708_-\|sporulation-protein-YqfC	unknown	unknown	gnl\|CDD\|131903
NZ_CP007626.1\|WP_006095981.1\|1337687_1338701_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511
NZ_CP007626.1\|WP_003200635.1\|1323577_1324930_-\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	unknown	unknown	gnl\|CDD\|223694

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_003200623.1\|1330678_1331710_-\|heat-inducible-transcriptional-repressor-HrcA	gnl\|CDD\|234621	PRK00082, hrcA, heat-inducible transcription repressor; Provisional.	1.28465e-150
NZ_CP007626.1\|WP_016116369.1\|1322767_1323433_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	1.78714e-128
NZ_CP007626.1\|WP_006095985.1\|1325832_1326771_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|225173	COG2264, PrmA, Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis].	4.87727e-122
NZ_CP007626.1\|WP_003200617.1\|1333546_1335370_-\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP007626.1\|WP_003200639.1\|1321815_1322259_-\|GatB/YqeY-domain-containing-protein	gnl\|CDD\|370480	pfam09424, YqeY, Yqey-like protein. The function of this domain found in the YqeY protein is uncertain.	7.96428e-62
NZ_CP007626.1\|WP_000048061.1\|1322274_1322448_-\|30S-ribosomal-protein-S21	gnl\|CDD\|234707	PRK00270, rpsU, 30S ribosomal protein S21; Reviewed.	2.58853e-11
NZ_CP007626.1\|WP_018782547.1\|1331843_1332980_-\|oxygen-independent-coproporphyrinogen-III-oxidase	gnl\|CDD\|236309	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase.	0
NZ_CP007626.1\|WP_001274011.1\|1337227_1337485_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	2.20496e-23
NZ_CP007626.1\|WP_003200627.1\|1328136_1329972_-\|chaperone-protein-DnaK	gnl\|CDD\|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP007626.1\|WP_003208528.1\|1319115_1320075_-\|PhoH-family-protein	gnl\|CDD\|224616	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms].	7.94984e-151
NZ_CP007626.1\|WP_018782546.1\|1335569_1335923_-\|DUF3679-domain-containing-protein	gnl\|CDD\|315165	pfam12438, DUF3679, Protein of unknown function (DUF3679). This domain family is found in bacteria, and is approximately 60 amino acids in length.	5.5457e-12
NZ_CP007626.1\|WP_006095982.1\|1335942_1337046_-\|GPR-endopeptidase	gnl\|CDD\|235078	PRK02858, PRK02858, germination protease; Provisional.	0
NZ_CP007626.1\|WP_018782548.1\|1324936_1325686_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	3.31508e-93
NZ_CP007626.1\|WP_040119623.1\|1316727_1318872_-\|HD-family-phosphohydrolase	gnl\|CDD\|224397	COG1480, COG1480, Predicted membrane-associated HD superfamily hydrolase [General function prediction only].	0
NZ_CP007626.1\|WP_018782549.1\|1320078_1321278_-\|sporulation-protein-YqfD	gnl\|CDD\|274335	TIGR02876, stage_IV_sporulation_protein, sporulation protein YqfD. YqfD is part of the sigma-E regulon in the sporulation program of endospore-forming Gram-positive bacteria. Mutation results in a sporulation defect in Bacillus subtilis. Members are found in all currently known endospore-forming bacteria, including the genera Bacillus, Symbiobacterium, Carboxydothermus, Clostridium, and Thermoanaerobacter. [Cellular processes, Sporulation and germination].	1.26164e-162
NZ_CP007626.1\|WP_018765852.1\|1329998_1330568_-\|nucleotide-exchange-factor-GrpE	gnl\|CDD\|237622	PRK14140, PRK14140, heat shock protein GrpE; Provisional.	1.23657e-82
NZ_CP007626.1\|WP_003200619.1\|1333034_1333409_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.58343e-39
NZ_CP007626.1\|WP_003200641.1\|1321411_1321708_-\|sporulation-protein-YqfC	gnl\|CDD\|131903	TIGR02856, Uncharacterized_protein_YqfC, sporulation protein YqfC. This small protein, designated YqfC in Bacillus subtilis, is both restricted to and universal in sporulating species of the Firmcutes, such as Bacillus subtilis and Clostridium perfringens. It is part of the sigma(E)-controlled regulon, and its mutation leads to a sporulation defect. [Cellular processes, Sporulation and germination].	4.02627e-37
NZ_CP007626.1\|WP_006095981.1\|1337687_1338701_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	5.52528e-112
NZ_CP007626.1\|WP_003200635.1\|1323577_1324930_-\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	gnl\|CDD\|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	0

>NZ_CP007626.1|WP_006095985.1|1325832_1326771_-|50S-ribosomal-protein-L11-methyltransferase
MKWSEISIHTTEEAVEAVSHILHEAGASGVAIEDPAELTKEREQQYGEIYALNPSEYPEDGVLIKAYFPQTDSLHETVASVKSSIDVLPSFDIEIGTGNITINEVDEEDWATAWKKYYHPVQISDTFTIVPTWEEYIPSSPDEKIIELDPGMAFGTGTHPTTTMCIRALEKTVQPGNTVIDVGTGSGVLSIAAAKLGAASVQAYDLDPVAVESAEMNVRLNKTDGIVSVGQNSLLEGIEGPVDLIVANLLAEIILLFPEDAARVVKQGGLFITSGIIGAKEKVISEALEKAGFTIEEVLRMEDWVAIIARNA
>NZ_CP007626.1|WP_018782548.1|1324936_1325686_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MQRYFVEEKYVNDASIRIVGDDVHHIARVMRMSVGDHIYCCVHGKTAMCTIAEITSEFVDSAIVEWVEASSELPVFVTIASGLPKGDKLELIFQKGTELGAAAFLPFQASRSIVKWDAKKADKKVERLKKIVKEAAEQSHRSEIPAVHAPASFKQLLAMSSDYDVCLVAYEEEAKQGEKANFAKALTALERGQKLLVVFGPEGGLSEEEISALREHKFIPCSLGPRILRTETAPLYALSAASYHFELMG
>NZ_CP007626.1|WP_003200635.1|1323577_1324930_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB
MATVAFHTLGCKVNHYETEAIWQLFKQGGYERTEYEKKADVYVINTCTVTNTGDKKSRQVIRRAVRQNPDAVICVTGCYAQTSPAEIMAIPGVDIVVGTQDREKMLGYIEEFRKERQPINAVRNIMKTRVYEELDVPYFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDGKEVIHQAQQLVDAGYKEIVLTGIHTGGYGEDMKNYNLAGLLRDMEAEVNGLKRLRISSIEASQISDEVIEVLDKSEVVVRHLHIPLQSGSNTVLKRMRRKYTMEFFQERLDRLKEALPGLAITSDVIVGFPGETEEEFMETYNFIKENRFSELHVFPYSKRTGTPAARMDDQIPEEVKNDRVHRLIELSNQLAKEYASQFEGEVLEIIPEEPFKDGDREGLYVGYTDNYLKVVFEGSEELIGKLVKVKITKAGYPYNEAQFVRVLEDDVKKESASA
>NZ_CP007626.1|WP_016116369.1|1322767_1323433_-|deoxyribose-phosphate-aldolase
MNYAKLIDHTLLKPDTKKAAIVTLCEEAKKHDFASVCVNPTWVETAAELLKGTDVKVCTVIGFPLGANTPETKAFETQDAIAKGATEVDMVINIGALKDKNDELVERDVRAVVEAAKGKALVKIIIETCLLTEEEKVRACELSVKAGVDFVKTSTGFSTGGATVEDVALMRKTVGPEIGVKASGGVRNGEDMDAMVEAGATRIGTSAGVALVSGKTATTDY
>NZ_CP007626.1|WP_000048061.1|1322274_1322448_-|30S-ribosomal-protein-S21
MSKTVVRKNESLEDALRRFKRSVSKTGTLAEARKREFYEKPSVKRKKKSEAARKRKF
>NZ_CP007626.1|WP_003200639.1|1321815_1322259_-|GatB/YqeY-domain-containing-protein
MSLLGRLNDDMKQAMKNKQKEKLTVIRMVKAALQNEGIKLQHTLTEEEELTVLTREVKQHKDSLLEFKKAGRDDLVDKLQNEIQILNTYLPEQLTEEELVNVVKQVISEVGAASKADMGKVMSAVMPKVKGKADGSQVNKLVAQLLA
>NZ_CP007626.1|WP_003200641.1|1321411_1321708_-|sporulation-protein-YqfC
MKKLVQMKNWLTKQIDLPVDVLMDLPRITLVGQVHIYIENHRGLLVFTDKEVRLLLKHGQLLIKGQSFVIKTILPEELLLEGIIEQVTFLENEKKDKL
>NZ_CP007626.1|WP_018782549.1|1320078_1321278_-|sporulation-protein-YqfD
MKNQWFTRWLGYVKVRIEGRGAERFINECVRRNLVVWDVKKIAEDTLVFCMLLRDVKRLRPIYRKNECKLYFIGRFGFPFWNKRLLKNSGFLIGFLIFFFGMIALSNMVWKIEITGAKPETEYILIKELDKMGIKKGRLQFQMPNVEDVQRHLTDNINAITWAGLEIKGTTYHFKIVEKNEPEKEKEQKPQNLVAKKEAIITKTFVETGKPVVMKNDYVQKGQLLVSGMFGKEDNPTIVSAKGIVYGETWYESEVTVPLKTTFQVYTGNSYNEHYLRLGSVKIKIWGFQHDKYKRSRTENVKHDVKLFGFILPISYEREIVREEEEANREYTEKQAMRVAKEMAEKELKKKLDEHAMIVSDKILHNEVEANHLRVTLHYTVIENIAEPQPISESDIQGD
>NZ_CP007626.1|WP_003208528.1|1319115_1320075_-|PhoH-family-protein
MAEQLIEMNQQVENPNEAIALFGVNDAHLKVIERELAVSIVTRGESVRVSGTDETVALVEKILQQLLAVIRKGVSISERDVAYAIQLGRQGKITHFEELYEEEIFKTAKGKSIRVKTMGQRQYIHAMKKNDIVFGIGPAGTGKTYLAVVMAVRALKQGYVKKIILTRPAVEAGESLGFLPGDLKEKVDPYLRPLYDALHDILGQEYTQRMLERGTIEIAPLAYMRGRTLDDSFVILDEAQNTTGAQIKMFLTRLGFSSKMVVTGDPSQVDLPKGVKSGLSIAANVLSGVSGISFVKLEQSDVVRHPLVQRIIEAYDKME
>NZ_CP007626.1|WP_040119623.1|1316727_1318872_-|HD-family-phosphohydrolase
MSRSQEISRWFRNIQHSKKLSWISYILLGAVLFFALMNNVKPEQLDVKMLSISKQTIHSPIKIEDKVTTDRKKREAAQKVEDQYTYRSEYKQNKVDIVNSVFLAIKEVEADTKAVGPDEQKRISAAERLEKLKKKLPTDLTKSLSDSVLLQFVNAEPGQLSLARDAMVTAINNIMSTHIKMNEENDARERFVNEIRNVNVNSDLKDALNVLGKYAIEANYFYDSTATKDRKKVAEDAVAPVYILQGQILVKEGDTITREVYDQLKLVGLLEQGTTFQPFVGLAIIIGVLLFFMHKQFESFLKLKREEKPYILAYTTIVAITVVLMKIISLFQKLEYAGIAYVVPVAMGTILVKLMIGDRFVFITSMIFSVCGSIMFNEGVTSTLNYSVGIYVLLSSLSVSIFLREKNRRSMILQAGILVSVLNVVVLAALLLLRNGNFSPLEIGSQLLMAAASGIISSILAMGILPYLESGLGIVSSMKLMELSSPNHPLLRKILLEAPGTYHHSVMVANLSEAACEAVGANGVLARVGAYYHDIGKTVQPHFFIENQMGIENPHDKLDPEMSRDIIIAHVTNGVKMLEEHHIPQEIIDIAGQHHGTTLLKYFYYKAIKEDKERYTEKMFRYPGSKATSKESAIVGIADSVEAAVRSMNHPTPEQINNLVQSIIKDRLQDGQFSECNLTFKELQIVGKTLCETLNGIFHSRIKYPEPPEEKGTE
>NZ_CP007626.1|WP_003200627.1|1328136_1329972_-|chaperone-protein-DnaK
MSKIIGIDLGTTNSCVAVMEGGEPKVIPNPEGNRTTPSVVAFKNEERQVGEVAKRQAITNPNTIMSVKRHMGTDYKVEVEGKNYTPQEISAIILQNLKASAEAYLGETVTKAVITVPAYFNDAERQATKDAGRIAGLEVERIINEPTAAALAYGLEKQDEEQKVLVYDLGGGTFDVSILELADGTFEVISTAGDNRLGGDDFDQVIIDHLVAEFKKENNIDLSQDKMALQRLKDAAEKAKKDLSGVTQTQISLPFISAGAAGPLHLELNLTRAKFEELSANLVERTLEPTRRALKDAGLSPSELDKVILVGGSTRIPAVQEAIKRETGKEPYKGVNPDEVVALGAAVQGGVLTGDVKGVLLLDVTPLSLGIETMGGVFTKLIERNTTIPTSKSQVFSTAADNQPAVDIHVLQGERPMSADNKTLGRFQLTDIPPAPRGIPQIEVTFDIDANGIVNVRAKDLGTSKEQTITIQSSSGLSDEEVDRMVKEAEANADADQKRKEEVELRNEADQLVFQTDKVVKDLEGKVDAAEVAKATEAKEALQAAIEKNDLDEIRAKKDALQEIVQQLTVKLYEQAQAAAGAQQAEGTQGNASAKNDNVVDAEFEEVKEDK
>NZ_CP007626.1|WP_018765852.1|1329998_1330568_-|nucleotide-exchange-factor-GrpE
MEERNEQVVEEAKETQTEESITAENSEETVVEEKSEAALLQEKVDGLQAKLTETEGRTLRLQADFENYKRRVQLDKQAAEKYRSQSLVSDILPALDNFERAMQVEASDEQMKSLLQGMEMVYRQLLEALTKEGVEAIEAVGKQFDPHEHQAVMQVEDSEFESNAVVEEFQKGYKLKDRVIRPSMVKVNQ
>NZ_CP007626.1|WP_003200623.1|1330678_1331710_-|heat-inducible-transcriptional-repressor-HrcA
MLTERQLLILQTIIDDFIGSAQPVGSRTLAKKDEITFSSATIRNEMADLEELGFIEKTHSSSGRVPSEKGYRFYVDHLLAPQHLSNEDVVQIKDLFAERIFEAEKIAQQSAQILSELTNYTAIVLGPKVSANKLKNVQIVPLDHQTAVAIIVTDTGHVQSKTITVPESVDLSDLEKMVNILNEKLSGVPMAELHNKILKEIVTVLRGYVHNYDSAIKMLDGTFQVPLSEKIYFGGKANMLSQPEFHDIQKVRSLLTMIDNEAEFYDILRNKQVGIQVKIGRENSSTAMEDCSLISATYSIGEEQIGTIAILGPTRMQYSRVISLLQLFSRQFTDGLNGLYKSK
>NZ_CP007626.1|WP_018782547.1|1331843_1332980_-|oxygen-independent-coproporphyrinogen-III-oxidase
MQAAYIHIPFCQHICHYCDFNKVFIERQPVDQYLEYLEKEIINTVQKVPFENMKTIFVGGGTPTALNMEQTKKLLDIINRRLRPFAPNCELTFEANPGDLPKEKLNLLLDGGVNRISFGVQTFRDELLQKIGRKHTREDAFVAIREAQEVGFTNINVDLIYALPGQTIEDVKETLDIAFTLGVQHFSAYSLIVEPKTVFYNLMNKGKLRLPGEEHEARMYEIVMDEMENHGYKQYEISNFSKEGYESRHNLTYWNNEQYYGFGAGAHSYVNGERIQNVGPLKQYFSKIDETGFPYLDVHEVTRKERMEEELFLGLRKTKGVSKLTFQKKFGVEMDEIFAKQLLSNKEYGLLQDKGNHVCLTRQGKLLGNEVFQSFLID
>NZ_CP007626.1|WP_003200619.1|1333034_1333409_-|helix-turn-helix-transcriptional-regulator
MSENIRKDIQEKIQNGDFNCEKELTLSIISGKWKVVILWHLGVEGSHRFSELQRLFPNISHKVLSNQLKELMEDGIIDRTVYPEVPPRVEYFMTDLGMTLLPIVEMMYDWGKMRMEQIRNTLQK
>NZ_CP007626.1|WP_003200617.1|1333546_1335370_-|elongation-factor-4
MNKEERAKRQSNIRNFSIIAHIDHGKSTLADRILEKTNALTQREMKAQLLDSMDLERERGITIKLNAVQLTYTAKNGEEYTLHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNNLEILPVINKIDLPSADPERVRQEVEDVIGLDASEAVLASAKAGIGIEDILEQIVEKVPAPEGDPEEPLQCMIFDSLYDPYRGVIAYIRVVNGTVKVGDKVRMMATGKEFEVTEVGVFTPKTTQREELTVGDVGFLAASIKNVGDTRVGDTITHAKRPAAEPLPGYRKLNPMVFCGLYPIDSARYNDLRDALEKLELNDSALEFEPETSQALGFGFRCGFLGLLHMEIIQERIEREFKIDLITTAPSVIYKVYLTSGEDLIVDNPSNMPDPQSIDRVEEPFVKATIMVPNDYVGAVMEICQGKRGTFLDMQYLDETRVTLTYEIPLSEIVYDFFDQLKSNTKGYASFDYELIGYKPSRLVKMDILLNNEQVDALSFIVHRDSAYDRGKVIVEKLKELIPRQQFEVPIQATIGNKVVARSTIKAMRKNVLAKCYGGDISRKRKLLDKQKEGKKRMKSVGSVEVPQEAFMAVLKMDDN
>NZ_CP007626.1|WP_018782546.1|1335569_1335923_-|DUF3679-domain-containing-protein
MSRFTLQCVCCVILFLFVMLIGIGIVNHGLKSMKGYRQPTYEQVARMTGTGSENVDLEILGGTFSASEKQKQLESLRSFNVVEGLGMGIAEFVRSIAKFSTDIVIGKIKDIFSQLGE
>NZ_CP007626.1|WP_006095982.1|1335942_1337046_-|GPR-endopeptidase
MKEPLDLSKYSVRTDLAVEAHQMLQERQQKQTGIEGVVVKEREEEGITITKVIIDESASESMGKKAGNYLTLEVQGIRQQDTELQQKVERIFAKEFSYLLGEIGITKEASCLIVGLGNWNVTPDALGPIVVENVLVTRHLFKLQPESVEEGYRPVSAIRPGVMGITGIETSDVIYGIIEKTKPDFVIAIDALAARSIERVNSTIQISDTGIHPGSGVGNKRKELSKETLGIPVIAIGVPTVVDAVSITSDTIDFILKHFGREMREGDKPSRSLLPAGFTFGEKKKLTEEDMPDEKSRNMFLGAVGTLEDEEKRKLIYEVLAPLGHNLMVTPKEVDAFIEDMANVIASGLNAALHHQIDQDNTGAYTH
>NZ_CP007626.1|WP_001274011.1|1337227_1337485_+|30S-ribosomal-protein-S20
MANIKSAIKRAKLSEERRAHNASIKSDMRSAVKTVEALVTNNDLENAKEAFKTASKKLDKAARKGLIHQNAAARQKSRLAKQVNA
>NZ_CP007626.1|WP_006095981.1|1337687_1338701_-|DNA-polymerase-III-subunit-delta
MSDIHKKIKKKQFAPLYLIYGTEVYFINETIKLITTEALAEEDREFNVVTYDLEEAYLEDVIEDARTLPFFGERKILLVKSPLFLTSQKEKLEQNLKILEEYVAEPSPFSIVVFVAPYEKLDERKKITKLLKKTADVVEASTMQVQDVRKWIVARVDEVHVHIEEAAVSLLLELVGSNVTMLAKEMDKLTLYVGIGGEITTGLVAELVPKSVEQNVFALTEKVVKKDIAGAMLILDGLFTQQEEPIKLLALLVSQFRLLYQVKELQQRGYGQNQIASHIGVHPYRVKLAMNQTKFFSFEELKKVILELAEADYSMKTGKMDKKLVLEFFLMRLNHIG

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Crispr_ID: NZ_CP007626_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_3

1729143-1729225

Orphan

Consensus_repeat	Method
TCGTACCTACTTGTTGCCAGCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007626_3

>merge|NZ_CP007626|3|1729143-1729225|CRISPRCasFinder
TCGTACCTACTTGTTGCCAGCCTGTTTGCATTGCTCCATTTCCGTTAAAGTAATACCATATCGTACCTACTTGTTGCCAACCT

>NZ_CP007626|3|2|1729143-1729225|CRISPRCasFinder
TCGTACCTACTTGTTGCCAGCCT	GTTTGCATTGCTCCATTTCCGTTAAAGTAATACCATA
TCGTACCTACTTGTTGCCAACCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_018782827.1\|1730195_1730420_-\|spore-germination-protein	unknown	unknown	gnl\|CDD\|371190
NZ_CP007626.1\|WP_018782823.1\|1720611_1721283_+\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|380324
NZ_CP007626.1\|WP_003201180.1\|1727532_1728063_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|225091
NZ_CP007626.1\|WP_040119018.1\|1738334_1739237_-\|protein-VrrB	unknown	unknown	gnl\|CDD\|368014
NZ_CP007626.1\|WP_040119017.1\|1729856_1730177_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_003201171.1\|1730558_1730864_-\|rhodanese-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|238089
NZ_CP007626.1\|WP_018782828.1\|1731567_1732686_-\|homoserine-O-acetyltransferase	unknown	unknown	gnl\|CDD\|235859
NZ_CP007626.1\|WP_018782832.1\|1737422_1737851_+\|haloacid-dehalogenase	unknown	unknown	gnl\|CDD\|212152
NZ_CP007626.1\|WP_123767185.1\|1732899_1734849_+\|spore-germination-protein	unknown	unknown	gnl\|CDD\|377020
NZ_CP007626.1\|WP_018764554.1\|1720144_1720471_-\|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|334619
NZ_CP007626.1\|WP_018782824.1\|1722365_1726049_+\|nitrate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|227346
NZ_CP007626.1\|WP_040119015.1\|1717348_1717840_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	unknown	unknown	gnl\|CDD\|236483
NZ_CP007626.1\|WP_016116713.1\|1721455_1722148_+\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP007626.1\|WP_018782831.1\|1735935_1737015_+\|Ger(x)C-family-spore-germination-protein	unknown	unknown	gnl\|CDD\|274338
NZ_CP007626.1\|WP_018782822.1\|1718905_1719919_-\|GTP-3',8-cyclase-MoaA	unknown	unknown	gnl\|CDD\|274250
NZ_CP007626.1\|WP_018782821.1\|1717875_1718889_-\|molybdopterin-synthase-adenylyltransferase-MoeB	unknown	unknown	gnl\|CDD\|183547
NZ_CP007626.1\|WP_006096259.1\|1728080_1728782_+\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
NZ_CP007626.1\|WP_003201353.1\|1737140_1737326_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018782830.1\|1734865_1735960_+\|GerAB/ArcD/ProY-family-transporter	unknown	unknown	gnl\|CDD\|281794
NZ_CP007626.1\|WP_018782825.1\|1726038_1727514_+\|nitrate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|224063

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_018782827.1\|1730195_1730420_-\|spore-germination-protein	gnl\|CDD\|371190	pfam10676, gerPA, Spore germination protein gerPA/gerPF. This is a bacterial family of proteins that are required for the formation of functionally normal spores. Proteins in this family may be involved in establishing normal coat structure and/or permeability which could control the access of germinants to their receptor.	4.57072e-09
NZ_CP007626.1\|WP_018782823.1\|1720611_1721283_+\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|380324	cd02149, NfsB-like, nitroreductase similar to Escherichia coli NfsB. NAD(P)H:FMN oxidoreductase family. This domain catalyzes the reduction of flavin, nitrocompound, quinones and azo compounds using NADH or NADPH as an electron donor. The enzyme is a homodimer, and each monomer binds a FMN as co-factor. This family includes FRase I in Vibrio fischeri, wihich reduces FMN into FMNH2 as part of the bioluminescent reaction. The family also includes oxygen-insensitive nitroreductases that use NADH or NADPH as an electron donor in the ping pong bi bi mechanism. This type of nitroreductase can be used in cancer chemotherapy to activate a range of prodrugs.	8.33341e-71
NZ_CP007626.1\|WP_003201180.1\|1727532_1728063_+\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	5.5827e-35
NZ_CP007626.1\|WP_040119018.1\|1738334_1739237_-\|protein-VrrB	gnl\|CDD\|368014	pfam04592, SelP_N, Selenoprotein P, N terminal region. SelP is the only known eukaryotic selenoprotein that contains multiple selenocysteine (Sec) residues, and accounts for more than 50% of the selenium content of rat and human plasma. It is thought to be glycosylated. SelP may have antioxidant properties. It can attach to epithelial cells, and may protect vascular endothelial cells against peroxynitrite toxicity. The high selenium content of SelP suggests that it may be involved in selenium intercellular transport or storage. The promoter structure of bovine SelP suggest that it may be involved in countering heavy metal intoxication, and may also have a developmental function. The N-terminal region of SelP can exist independently of the C terminal region. Zebrafish selenoprotein Pb lacks the C terminal Sec-rich region, and a protein encoded by the rat SelP gene and lacking this region has also been reported. N-terminal region contains a conserved SecxxCys motif, which is similar to the CysxxCys found in thioredoxins. It is speculated that the N terminal region may adopt a thioredoxin fold and catalyze redox reactions. The N-terminal region also contains a His-rich region, which is thought to mediate heparin binding. Binding to heparan proteoglycans could account for the membrane binding properties of SelP. The function of the bacterial members of this family is uncharacterized.	1.3807e-06
NZ_CP007626.1\|WP_018782832.1\|1737422_1737851_+\|haloacid-dehalogenase	gnl\|CDD\|212152	cd11545, NTP-PPase_YP_001813558, Nucleoside Triphosphate Pyrophosphohydrolase (EC 3.6.1.8) MazG-like domain found in Exiguobacterium sibiricum YP_001813558.1 protein and its bacterial homologs. This family contains a putative NTP_PPase (YP_001813558.1) from Exiguobacterium sibiricum and its bacterial homologs. Unlike normal dimeric dUTPase-like proteins with a central four-helix bundle forming the active site, YP_001813558.1 displays a very unusual interlaced segment-swapped dimer that might be important for it to adapt to an extremely cold environment. Moreover, structural analysis and comparisons indicate that YP_001813558.1 potentially prefers to hydrolyze dCTPs or its derivatives.	1.46262e-62
NZ_CP007626.1\|WP_003201171.1\|1730558_1730864_-\|rhodanese-like-domain-containing-protein	gnl\|CDD\|238089	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein. The cysteine containing enzymatically active version of the domain is also found in the Cdc25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and certain stress proteins such as senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions (no active site cysteine) are also seen in dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases, where they are believed to play a regulatory role in multidomain proteins.	1.71508e-23
NZ_CP007626.1\|WP_018782828.1\|1731567_1732686_-\|homoserine-O-acetyltransferase	gnl\|CDD\|235859	PRK06765, PRK06765, homoserine O-acetyltransferase; Provisional.	0
NZ_CP007626.1\|WP_123767185.1\|1732899_1734849_+\|spore-germination-protein	gnl\|CDD\|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	0
NZ_CP007626.1\|WP_018764554.1\|1720144_1720471_-\|winged-helix-turn-helix-transcriptional-regulator	gnl\|CDD\|334619	pfam01638, HxlR, HxlR-like helix-turn-helix. HxlR, a member of this family, is a DNA-binding protein that acts as a positive regulator of the formaldehyde-inducible hxlAB operon in Bacillus subtilis.	1.18222e-40
NZ_CP007626.1\|WP_018782824.1\|1722365_1726049_+\|nitrate-reductase-subunit-alpha	gnl\|CDD\|227346	COG5013, NarG, Nitrate reductase alpha subunit [Energy production and conversion].	0
NZ_CP007626.1\|WP_040119015.1\|1717348_1717840_+\|cyclic-pyranopterin-monophosphate-synthase-MoaC	gnl\|CDD\|236483	PRK09364, moaC, cyclic pyranopterin monophosphate synthase MoaC.	4.17971e-98
NZ_CP007626.1\|WP_016116713.1\|1721455_1722148_+\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	5.85827e-50
NZ_CP007626.1\|WP_018782831.1\|1735935_1737015_+\|Ger(x)C-family-spore-germination-protein	gnl\|CDD\|274338	TIGR02887, Spore_germination_protein_B3, germination protein, Ger(x)C family. Members of this protein family are restricted to endospore-forming members of the Firmicutes lineage of bacteria, including the genera Bacillus, Clostridium, Thermoanaerobacter, Carboxydothermus, etc. Members are nearly all predicted lipoproteins and belong to probable transport operons, some of which have been characterized as crucial to germination in response to alanine. Members typically have been gene symbols gerKC, gerAC, gerYC, etc. [Transport and binding proteins, Amino acids, peptides and amines, Cellular processes, Sporulation and germination].	6.46049e-87
NZ_CP007626.1\|WP_018782822.1\|1718905_1719919_-\|GTP-3',8-cyclase-MoaA	gnl\|CDD\|274250	TIGR02666, Cyclic_pyranopterin_monophosphate_synthase, molybdenum cofactor biosynthesis protein A, bacterial. The model for this family describes molybdenum cofactor biosynthesis protein A, or MoaA, as found in bacteria. It does not include the family of probable functional equivalent proteins from the archaea. MoaA works together with MoaC to synthesize precursor Z from guanine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Molybdopterin].	3.36121e-154
NZ_CP007626.1\|WP_018782821.1\|1717875_1718889_-\|molybdopterin-synthase-adenylyltransferase-MoeB	gnl\|CDD\|183547	PRK12475, PRK12475, thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional.	0
NZ_CP007626.1\|WP_006096259.1\|1728080_1728782_+\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	3.88942e-113
NZ_CP007626.1\|WP_018782830.1\|1734865_1735960_+\|GerAB/ArcD/ProY-family-transporter	gnl\|CDD\|281794	pfam03845, Spore_permease, Spore germination protein.	7.8224e-93
NZ_CP007626.1\|WP_018782825.1\|1726038_1727514_+\|nitrate-reductase-subunit-beta	gnl\|CDD\|224063	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion].	0

>NZ_CP007626.1|WP_006096259.1|1728080_1728782_+|respiratory-nitrate-reductase-subunit-gamma
MMDQFLWVLFPYIIFAIFIGGHIFRYNYDQFGWTSKSSELLEKKMLRIGSLLFHFGIMFVIGGHIMGILIPESVYTSFGISEHMYHMVAIGFGLPAGIASIVGLVILMYRRFTVKRIIATSTKGDYVALVLLFIVMLAGLSSTFFNIDAKGFDYRTTIGPWFRSLFVFQPKAEYMAEVPIWFKIHIIAAMGLFATWPFTRLVHVFSVPVKYLRRSYVIYRKRQPIESEKAKIQ
>NZ_CP007626.1|WP_003201180.1|1727532_1728063_+|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MKQGLQTAFSCASFLLSYPETGWREALPELQETIDTITHEEIHTLLTAFIKQAQEKTNDQLIDSYVYTFDFGKKTNMYLTYMNTGEQRERGIELLELKQHYQKAGFAVTDKELPDYLPLLLEFLANANEEDSEPIMSRYTKDIQALHGQLKEANCMYEPILAAILLAIDAWGVQAN
>NZ_CP007626.1|WP_018782825.1|1726038_1727514_+|nitrate-reductase-subunit-beta
MKIKAQVGMVMNLDKCIGCHTCSVTCKNTWTNRPGAEYMYFNNVETKPGIGYPKQWEDQEKYKGGWELKNGEIQLKSGSKMKRLMNIFHNPDQPTIDDYFEPWNYDYETLTNSPQRKHQPVARPKSAITGEFIDKIEWGPNWEDDLAGGHITGLQDPNVKKMEEDIKTDFENVFMMYLPRICEHCMNPSCVSSCPSGAMYKREEDGIVLVDQNACRAWRFCVSSCPYKKVYFNWQTNKAEKCTMCFPRIEAGMPTICSETCVGRIRYIGVMLYDADKVKEAASVEDEKDLYESQLTVFLDPNDPEVAAEAKKQGIPEEWIKAAQESPIYKMIIDWKIALPLHPEYRTMPMVWYIPPLSPIMNMVEGKGSNWQAEEIFPAIDNMRIPIQYLANLLTAGDESHIRLTLKKMAVMRTHMRALQINKEPDEAVLKELGLTKEDVEDMYRLLAIAKYKDRFVIPTSHREQVADLYSEQGSCGLSFAGGPGSCMTLS
>NZ_CP007626.1|WP_018782824.1|1722365_1726049_+|nitrate-reductase-subunit-alpha
MKKKPSALMKRLKYFSPIDRYNDNHTQETYEDREWENVYRKRWQHDKVIRSTHGVNCTGSCSWNIYVKDGIVTWEGQELNYPSTGPDMPDFEPRGCPRGASFSWYIYSPLRVKYPYVRGVLWNMWQEELQNHKSPLDAWKSIVENPEKARTYKEARGKGGFIRASWDEVLQLVAASLLYTVIKYGPDRNVGFSPIPAMSMLSHAAGSRFMQLMGGPMLSFYDWYADLPPASPQIWGDQTDVPESSDWYNSGYIMTWGSNVPMTRTPDAHFLAEVRYKGTKVVSVSPDFAESTKFADDWISVKQGTDGALAMAMGHVILQEFYVDNQVEYFTNYAKQYTDFPFFVTLKQQGDQFVADRFLNANDIGRETKLGEWKPVLWNENTNNFATPHGTMGSRWDNEKKWNLRLEDEQTGEKIDPRLSLLGMEDAVETVQIPYFSDDGNKILERTIPVKKIATEKGDIFVTTVYDLTLANYGVNRGLGEQEPKDFNDDVPFTPAWQEKVTGVKRELIIQIAREFAQNAVDTNGRSMIIVGAGINHWFNSDTIYRAVLNLVLLVGAQGVNGGGWAHYVGQEKLRPAEGWQTIAMAKDWQGPPKLQNGTSFFYFVTDQWRYEDTPVGHLASPVVGNSRYQHHGDYNVLAARLGWLPSYPTFEKNGIELYKEAVASGATTGEEIGKYVAQKLKEKELKFAIEDPDNKNNFPRNLFVWRANLISSSGKGHEYFLKHLLGTTNGLMNDDSDSLRPEEIKWHEEAPEGKLDLLINLDFRMAGTALYSDIVLPASTWYEKHDLSSTDMHPFVHPFNPAIGSPWEARSDWDIFCSLSKAVSDLAKELDLDPMKEVVATPLLHDTPQELAQPLGKIKDWSKGECEPIPGKTMPQIHVVERDYKTIYDKMTALGPNTGKQPIGTKGISWSAEKEYEQLKSRLGVIRTDSIAKGCPDITEAINAAEAVLTLSSTTNGHMAVKAWEALEKQTDLHLRDLAEEREEECFTFEQITAQPKTVITSPAFTGSEKGGRRYSPFTTNVERLIPWRTITGRQSFYLDHDMMKEFGETMATFKPILQHKPFRKSRPEVEGKEITLNYLTPHNKWSIHSMYFDSLPMLTLFRGGPTVWMNKDDAAEAGVSDNDWIECFNRNGVVVARAVVTHRIPRGMAFMHHAQDRHINVPGTKLTSNRGGTHNSPTRIHVKPTHMIGGYGQLSYGFNYYGPTGNQRDLNVVIRKLKEVDWLED
>NZ_CP007626.1|WP_016116713.1|1721455_1722148_+|Crp/Fnr-family-transcriptional-regulator
MTNRTALSEDLKELLASVEYKMQINKGSYIFQEGVEAKELYIVRSGKVQISKISADGQELTLRICSKHDIIGELTLFTDNAKYLLNSKCLEDVEVGVIKRDALEKALLEKPALAFEFMKWISEHLRRMQTKFRDLVLHGKKGALYSTLIRMTNSYGILKENGILIDLPLTNQELANFCATSRESVNRMLNDLKKQGIISIHKGKITIHNLQFLKCEIACEDCPTSICSIE
>NZ_CP007626.1|WP_018782823.1|1720611_1721283_+|NAD(P)H-dependent-oxidoreductase
MEHTKEEILKAYQFRHACKEFDVNKKVSDEDFHFILETGRLSPSSFGFEPWKFVVIQNQDIRNKLLPVAWGAQKQLSTASHFVVILARKKEDMIYDSSYISNFMKNIQQLPEEVVTMKLGFYKAFQETDFQLFESDRAMFDWASKQTYIALGNMMTAAAQIGIDSCPIEGFHQEKVEAILKEEGIVSGDTFGVSVLVAFGYRAEEPKRDKTRQTMDMVVEWIK
>NZ_CP007626.1|WP_018764554.1|1720144_1720471_-|winged-helix-turn-helix-transcriptional-regulator
MEQKDINRCSVEVTLDVIGGKWKGVILFHLMNTKEIRFNQFLRLMPGITQRMLTRQLRELEAAGVIHREVYKEVPPKVEYSLTKFGKSLTPIITLMREWGEEYRTQIK
>NZ_CP007626.1|WP_018782822.1|1718905_1719919_-|GTP-3',8-cyclase-MoaA
MREKIRDSLGRPLQDLRISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLAKLFVGMGVKKIRLTGGEPLLRKELPKLIERLAKLDGLTDIGLTTNGIHLTKQAKALKEAGLHRVNVSLDAIEDDVFRKINGRNISTKPVLKGITAAKEAGLDVKVNMVVKKGMNDSQILPMAAYFKEQEIPLRFIEFMDVGSTNGWNFEQVITKQELIEKISGVYSIEPVDPHYFGEVAKRYRYVGSDAEVGFITSVSESFCSSCTRARISADGKFYTCLFATKGTDLRKLLREGISDPDLLKVVQDVWEYREDRYSDERTEESANNRPKIEMSYIGG
>NZ_CP007626.1|WP_018782821.1|1717875_1718889_-|molybdopterin-synthase-adenylyltransferase-MoeB
MQERYSRQMLFSGISEAGQRKIREKHVLIIGAGALGAASAEAIVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQYKPKAVAAFERLRQINSEVEIVPVVTDVAVQEMEELIKNVDLILDATDNFEARLLINDISQKYNIPWIYGGCVGSYGVTYTILPGKTPCFRCLMEHPSSGATCDTAGIIQPAVQLVVAHQVTEALKILVEDFGALRETMLSFDLWNNQHMAFKVNRQKKDKCPSCGKLRTYPSLTFESQTKTEVLCGRNTVQIRPGAPQLLNLEEIKKRLQKSVDVQTTPYLLSFRVDEYRFVLFTDGRAFIHGTNDMKVAKRLYARYIG
>NZ_CP007626.1|WP_040119015.1|1717348_1717840_+|cyclic-pyranopterin-monophosphate-synthase-MoaC
MSSFTHFNNQGRAKMVDISDKKVTVRTAIACSSILVTKEIYDKISHNEIGKGDVLAVAQIAGIMAAKRTSDIIPMCHPLLLKGVDVSFDWETAKGQYRLRIEVKVKTEGSTGVEMEALTAASATALTVYDMCKAVDKGMIIGETYLLEKTGGKSGDYIRNSQS
>NZ_CP007626.1|WP_040119017.1|1729856_1730177_-|hypothetical-protein
MPANIKEFVIVNNYGNLFTGDNLRDTSFVASKTYSGATGPTCIDVVTVIGTATNLCLNPGDVVTTTYTKGSAIGTSMSTNIAPSANTSGTMQAVPNADSLDSVPGL
>NZ_CP007626.1|WP_018782827.1|1730195_1730420_-|spore-germination-protein
MSARIRKIKIVNNTGAVNVGDCYTIEPFAASKIYAGSGGSSIATFLNGKRMPSVTPRTPEFLPPLETSELTLGS
>NZ_CP007626.1|WP_003201171.1|1730558_1730864_-|rhodanese-like-domain-containing-protein
MTEVKTITTEEVQERLENGETLFLVDVREDEEVAQGKIPEAVHIKMGDIPNKVEFFDKENEYIFICRSGMRSENVCHYLNEQGFKTVNMVGGMLQYEGEIQ
>NZ_CP007626.1|WP_018782828.1|1731567_1732686_-|homoserine-O-acetyltransferase
MMYVKKESFHLKKFTFENGIKIPVQIGYETYGKLNREKSNAILVCHYFSATSHAAGKYTEQDLIPGWWDGLIGPGKAIDTDRYFVICTDNLCNVQVKNPYVITTGPKSVNPITGSEYGMGFPVFTFLDVARVQYELVNAMGITRLHAVIGPSAGGMIAQQWAVRYPHMVERMIGVITNPQNPVVTSVNVLQNAIEAIQLDPKWNDGNYGDEQPTKGLHLAGEMMFINGFDAHYYETTFPRNSAETLPYENFSARTSFEQNINALTLQNITFVDANSWMYTAKATLLHDLAHGFSSLEGALSQIEADVLMIPCKQDLLQPSRYNYKMVELLQKQGKCAEVYEIESINGHMAGVFDVHLFEKKVDEFLKRRVFV
>NZ_CP007626.1|WP_123767185.1|1732899_1734849_+|spore-germination-protein
MVSKEKKSSKTDSKEQNQTTKQEEQTQNKQHQSAQGTKQDAQTQNKQHQSAQGTKQDAQTQNKQHQFAQGTKQDAQTQNKQHQSAQAAKQDQQTQNKQHQFAQATKQDQQTQNKQHQSAQGTKQDAQTQNKQHQSAQATKQDQQIQGKQQNNSSNSIYDFSKPEKEKVHSLQDLLENLKTSSDFVSYHTSDDETMPYWISYYRPSLDGEKLQKYLMPALLEHTCSTLEELKEHIPMSGITITNDLQKIEDMVLKGHAIVQLHEQDQKCILANITIDNYRAPSIPLNESTVIGPQEGFVEDLDTNLNLVRKRLPVLALQTKEVIIGTFSKTKVVMMYLENLAEKDSVDYLEESLRTIEYDQINDSSYIQELMGEKSIFPLFINTERTDRVTTALIDGKIAIFVDGSPSVLLTPVSYFDFFVSPEDYNVSWLYATFSRFLRLIAVLFSICAAPLYVAILSYHYELIPSDLLETLILSRAQVPFPPLIEALFLELVIDLLREAGARLPMKVGQTLGIVGGIVIGQASVQAGLTSNILLIIVALSALASFITPIYKMGNAVRLLRFPFLLFAELGGLFGISLGFIFLFTHLFRLSSLQKPFALFYPARRQSLKDSWIRFPLSMIDTRDIQARPQHVKKSAHGISTKHTSDFDE
>NZ_CP007626.1|WP_018782830.1|1734865_1735960_+|GerAB/ArcD/ProY-family-transporter
MSKVKTKYQISPIFVFFLVHSAQFGAGVLGFARIIAKAAGYDAWIGVLITGIIIHILVWMMYYLLKNTEGNLIDLHHQTFGKWLGNGINIVFMLYFLVASISVVRTYVEIVQVWMFPTGSTWMFTAFLCLLSYYIISSGFRIITGICVVSISGTLGYIFLSLFMFKYAHWENLLPVFTHSLGNILKASQLSIYTMTGFEIFLMAYPFVKNPEKSHKFAQYGVLFSNILYLFSTILAFAFFSEKQLSKTIWSQLSMTQVIQLPFIERLEYIAISGYALVILTSFILPLWAATRGTHEIFHVKQKYILLSFMFITIIVSQLLTNRHDINDFISHTSKVSLWLIYVYIPILFLIVWVKRKWKKSRKN
>NZ_CP007626.1|WP_018782831.1|1735935_1737015_+|Ger(x)C-family-spore-germination-protein
MEKIKKKLILLSCICLFIITGCLQKNIVDDVQLIQGVVFDTAKNNKIKVTSVCPVQRKGNKVQVFEGIANAVKQVKADTSLESSQPFASGQMRVALFTTRIAKKGLSTSFDTLIRDVSIGNSVYVGLLEGNGPELLTGKYTTSSNVAIYIKKMLEHNMQTGPVPTDNLHLGAFRYYREGQDSYMPILKKSKDKIKITGIGLLKKDKYVGKIDRQDMFIFKGLLEKHRLDSHEFKSNNGYVMINNIRSKPTYTVNIKAGKPSFLIKVKIDARILELSKQVNLENKQNTKKISQEVEKSLNTKATKLIKKFKSLNVDPLGLGAKFRQHYRPFKLAEWKKMYKDVPITVKYEVDITNSGVIE
>NZ_CP007626.1|WP_003201353.1|1737140_1737326_+|hypothetical-protein
MSKKLVKPILNGILFLGVFLFAHTYLKNVSFTRYLLVVVPTLLVGMFGIDLALSFLIKKEE
>NZ_CP007626.1|WP_018782832.1|1737422_1737851_+|haloacid-dehalogenase
MANEKGLDKGYELVAKMHEVFGHPVTDVPTKLTEERAKIRASFMQEELEEFLEANTVEDQYDALIDLIYFAFGTFAEMGVRPDKGFEIVNNANMAKLFPDGKPRFREGDGKILKPEGWQAPEPQLRAEIERQRQKALAKAGK
>NZ_CP007626.1|WP_040119018.1|1738334_1739237_-|protein-VrrB
MKGMDNNASHGFMIGQDGYAQMLMGGAGQQGYGGNPTWMGGSSEGVPTSVAGAQTGMPTFVGGAQGGVPIGVPTTFPAFVGGAQGGVPVGAPTTFPAFVGGAQGGVPVGAPTTFPTFVGGAQSGFPASVGPQPGFGGVAPILVGGVGPQMIHGHHVHHGHHVHHVHHGHHGHHVHHGHHVHHGHHQHHGHHQHHGHHQQHGYHQQHGYHQQHGHHQQQVHHHGHHQIHPQAVLYQTQHHGQHQHHGQHQHHGQHQHHGQHQHHGQHQHHGQQHQTWYGGAGSAGSTAGTAGAAGHAGHGH

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Crispr_ID: NZ_CP007626_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_4

2152750-2152862

Orphan

Consensus_repeat	Method
CCTGACCGCTTCTATGCTCAGCCGGACGCTCTCTCC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007626_4

>merge|NZ_CP007626|4|2152750-2152862|CRISPRCasFinder
CCTGACCGCTTCTATGCTCAGCCGGACGCTCTCTCCTTCTCCCTTTGTTTTAAATTCGGCATGGGGCGAAAAAAGGACCTGACCGCTTCTATGCTCAGCCGGACGCTCTCTCC

>NZ_CP007626|4|3|2152750-2152862|CRISPRCasFinder
CCTGACCGCTTCTATGCTCAGCCGGACGCTCTCTCC	TTCTCCCTTTGTTTTAAATTCGGCATGGGGCGAAAAAAGGA
CCTGACCGCTTCTATGCTCAGCCGGACGCTCTCTCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_018781258.1\|2152089_2152455_-\|DUF1232-domain-containing-protein	unknown	unknown	gnl\|CDD\|225876
NZ_CP007626.1\|WP_018781265.1\|2140634_2141720_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_003205094.1\|2139095_2140265_+\|acyltransferase	unknown	unknown	gnl\|CDD\|376607
NZ_CP007626.1\|WP_003209033.1\|2151544_2152039_-\|metal-binding-protein	unknown	unknown	gnl\|CDD\|370771
NZ_CP007626.1\|WP_018781252.1\|2158791_2158956_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_006097494.1\|2159294_2160506_+\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP007626.1\|WP_018781251.1\|2163432_2164317_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|226112
NZ_CP007626.1\|WP_003205080.1\|2149202_2149385_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018781249.1\|2164914_2166294_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226987
NZ_CP007626.1\|WP_033794465.1\|2155617_2156502_+\|D-amino-acid-transaminase	unknown	unknown	gnl\|CDD\|171470
NZ_CP007626.1\|WP_018781254.1\|2156712_2158425_+\|SH3-domain-containing-protein	unknown	unknown	gnl\|CDD\|366353
NZ_CP007626.1\|WP_006097495.1\|2161249_2162764_-\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|376718
NZ_CP007626.1\|WP_006096935.1\|2164562_2164856_+\|DUF3910-family-protein	unknown	unknown	gnl\|CDD\|372445
NZ_CP007626.1\|WP_003205078.1\|2149500_2151162_-\|L-lactate-permease	unknown	unknown	gnl\|CDD\|182445
NZ_CP007626.1\|WP_018781261.1\|2146633_2148394_-\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP007626.1\|WP_018765147.1\|2143601_2144627_+\|membrane-protein	unknown	unknown	gnl\|CDD\|224213
NZ_CP007626.1\|WP_018781248.1\|2166306_2167845_-\|zinc-ribbon-domain-containing-protein	unknown	unknown	gnl\|CDD\|379084
NZ_CP007626.1\|WP_018781262.1\|2145123_2146482_+\|arsenic-transporter	unknown	unknown	gnl\|CDD\|238538
NZ_CP007626.1\|WP_018781264.1\|2142253_2143609_+\|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|376587
NZ_CP007626.1\|WP_018781256.1\|2153258_2155187_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_018781258.1\|2152089_2152455_-\|DUF1232-domain-containing-protein	gnl\|CDD\|225876	COG3339, COG3339, Uncharacterized conserved protein [Function unknown].	2.65314e-15
NZ_CP007626.1\|WP_006097494.1\|2159294_2160506_+\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	2.34818e-160
NZ_CP007626.1\|WP_003205094.1\|2139095_2140265_+\|acyltransferase	gnl\|CDD\|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	3.99766e-15
NZ_CP007626.1\|WP_003209033.1\|2151544_2152039_-\|metal-binding-protein	gnl\|CDD\|370771	pfam09988, DUF2227, Uncharacterized metal-binding protein (DUF2227). Members of this family of hypothetical bacterial proteins possess metal binding properties; however, their exact function has not, as yet, been determined.	1.31798e-47
NZ_CP007626.1\|WP_018781249.1\|2164914_2166294_-\|hypothetical-protein	gnl\|CDD\|226987	COG4640, COG4640, Predicted membrane protein [Function unknown].	3.21473e-37
NZ_CP007626.1\|WP_018781251.1\|2163432_2164317_+\|SH3-domain-containing-protein	gnl\|CDD\|226112	COG3584, COG3584, Uncharacterized protein conserved in bacteria [Function unknown].	2.58368e-37
NZ_CP007626.1\|WP_018781254.1\|2156712_2158425_+\|SH3-domain-containing-protein	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.30993e-27
NZ_CP007626.1\|WP_033794465.1\|2155617_2156502_+\|D-amino-acid-transaminase	gnl\|CDD\|171470	PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed.	0
NZ_CP007626.1\|WP_006097495.1\|2161249_2162764_-\|BCCT-family-transporter	gnl\|CDD\|376718	pfam02028, BCCT, BCCT, betaine/carnitine/choline family transporter.	0
NZ_CP007626.1\|WP_006096935.1\|2164562_2164856_+\|DUF3910-family-protein	gnl\|CDD\|372445	pfam13049, DUF3910, Protein of unknown function (DUF3910). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length.	6.15384e-55
NZ_CP007626.1\|WP_003205078.1\|2149500_2151162_-\|L-lactate-permease	gnl\|CDD\|182445	PRK10420, PRK10420, L-lactate permease; Provisional.	0
NZ_CP007626.1\|WP_018781261.1\|2146633_2148394_-\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0
NZ_CP007626.1\|WP_018765147.1\|2143601_2144627_+\|membrane-protein	gnl\|CDD\|224213	COG1294, AppB, Cytochrome bd-type quinol oxidase, subunit 2 [Energy production and conversion].	1.94419e-49
NZ_CP007626.1\|WP_018781248.1\|2166306_2167845_-\|zinc-ribbon-domain-containing-protein	gnl\|CDD\|379084	pfam13240, zinc_ribbon_2, zinc-ribbon domain. This family consists of a single zinc ribbon domain, ie half of a pair as in family DZR. pfam12773.	9.34205e-05
NZ_CP007626.1\|WP_018781262.1\|2145123_2146482_+\|arsenic-transporter	gnl\|CDD\|238538	cd01118, ArsB_permease, Anion permease ArsB. These permeases have been shown to export arsenate and antimonite in eubacteria and archaea. A typical ArsB permease contains 8-13 transmembrane helices and can function either independently as a chemiosmotic transporter or as a channel-forming subunit of an ATP-driven anion pump (ArsAB). The ArsAB complex is similar in many ways to ATP-binding cassette transporters, which have two groups of six transmembrane-spanning helical segments and two nucleotide-binding domains. The ArsB proteins belong to the ArsB/NhaD superfamily of permeases that translocate sodium, arsenate, sulfate, and organic anions across biological membranes in all three kingdoms of life.	3.56492e-146
NZ_CP007626.1\|WP_018781264.1\|2142253_2143609_+\|cytochrome-ubiquinol-oxidase-subunit-I	gnl\|CDD\|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	3.09789e-150
NZ_CP007626.1\|WP_018781256.1\|2153258_2155187_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	2.28498e-153

>NZ_CP007626.1|WP_018781258.1|2152089_2152455_-|DUF1232-domain-containing-protein
MERKFSVEAFWNKVKHVAKQAGQSVIYASLLLFYIMQRPDVPKRVKATIIGALAYFIAPIDAIPDFIAGIGYTDDLGALTAALLQASMYVNEDVKEKAQMKLADWFGSDIDTSFIDQKLDQ
>NZ_CP007626.1|WP_003209033.1|2151544_2152039_-|metal-binding-protein
MPSGKTHTKINLLSLPIVLFMLVSYGLTNFDFLLTFAIGFLIGTFFLTPDLDIHSNAYNKWGLLRIFWYPYQCVMPHRSFLTHTLVIGDLIRILYMLLVFSPFLYIVNKMVLDGRLLEIAKEHDVALTTFVIGVIAASALHIIADRLNTRRKKLMRKKKKRRRR
>NZ_CP007626.1|WP_003205078.1|2149500_2151162_-|L-lactate-permease
MGTWTQVYDPFGNIWISAAVALIPIIFFFLALAVFRMKGYVAGLITVVLTILVALFAYKMPFTMAMAATGYGFAYGLWPIAWIIVMSVFLYKISVKTGQFDVIRASVLSITNDHRLLVILIGFSFGAFLEGAAGFGAPVAITAALLAGLGLNPLYAAGLCLIANTAPVAFGAMGIPITVAGQVTGIDPHKIGQMAGHQLPFLSLFVPFFIVFLMDGFKGIKQTWPALLVAGSSFAITQFITATFLGPELPDITSALVSLVCLALFLKVWQPKEIYQSNQANAEAAATTTAASMPKLTVGKVVKAWSPFIILTVMVVIWSQSFFKALFAPGGTLESLVFKFQIPGLHNLVMKAEPIVNKPTPYEAVFKLDILSATGTAILIACIISIIILKMSAKQAIETFAETLQELKMPILSIGLVLGFAFIANYSGLSSTLALALAGTGGLFPFFSPFLGWLGVFLTGSDTSANALFSNLQAITAQQVGVKEVLLVAANTTGGVTGKMISPQSIAIACAAVGLAGKESDLFRFTVKHSIFFVVIVGIMTYVQAYYLTWMIP
>NZ_CP007626.1|WP_003205080.1|2149202_2149385_+|hypothetical-protein
MHFWTLFSIWITANYGIGWLFEVHWKDEDAGEEFFAIFILFISILIYRGINKLGRVFIRG
>NZ_CP007626.1|WP_018781261.1|2146633_2148394_-|phosphomethylpyrimidine-synthase-ThiC
MKQSVSAEQIELKSSLPGSQKVYVDGPREGMKVPMREIEQSDTNGVPNPPIRVYDTSGPYTDPEYKVELEKGIPTPRRAWIVDRGDVEEYEGREIKPEDDGVKAASQHTPVFPQMDRKPLRAKKGANVTQMHYARNGIITSEMEYVAIREGVEPEFVRKEIAEGRAILPANINHPEAEPMIIGRNFHVKVNANIGNSAVSSSIAEEVEKMTWATRWGADTIMDLSTGKNIHTTREWIIRNAPVPVGTVPIYQALEKVNGIAEDLTWEVYRDTLIEQAEQGVDYFTIHAGVLLRYIPITAKRTTGIVSRGGSIMAQWCLFHHKENFLYTHFEEICEIMKQYDVSFSLGDGLRPGSIADANDEAQFSELETLGELTKIAWKHDVQVMIEGPGHVPMHLIKENMDKELDICQGAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVREGVITYKIAAHAADLAKGHKTAQQRDDALSKARFEFRWRDQFNLSLDPERAMDFHDETLPAEGAKTAHFCSMCGPKFCSMRISHDIREYAKENDLETTEAIEKGMKEKSEEFKEAGSHLYQ
>NZ_CP007626.1|WP_018781262.1|2145123_2146482_+|arsenic-transporter
MSTEILITIVVFFLTMIIIFWRPRGLNEAWPAAIGAGIILLTGLVSKPDVMDIISKIGGASITILATIVMAVILESFGFFHWAAAKLANLAKGSGHRLYWYIQLLCFLMTLLFNNDGSILITTPILILLLKNLQLKPHQQIPYLLSGALIATASSAPIGVSNIVNLIALNIVHMTLYMHTAMMFVPATLGLLFMSWLMYTVLKRKLPKKLPVSSYDIEEIFFTKNFHPLKGKNSVDTKQKRTKFMLKVLLFVFLMRCLLFVASFLSIPIEIVAVLGSLVLLVWRWYYLRTNPVDILKKTPWHILIFAFSMYVIIYGLHNAGLTTFLVKWLEPIVNQHLLYASFTMGGLVSLLSNVFNNHPALMIGTITLTEMGLDPVTLKTIYLANIIGSDMGSLLLPIGTLASLIWMYILKQNKIKVKWKDYLSVSLIVIPLSTIVTLFLLFYWVQLFFSL
>NZ_CP007626.1|WP_018765147.1|2143601_2144627_+|membrane-protein
MHEASIAIIILWAIIFVYSILGSIDFGAGFWGMVYAKHPTLAGKLANRYLSPTWEVTNTFLVFVVVAFLGFFPKAAFTLATVMFVPVTLILVLVAIRSTFMVFAYSVPKYEHILRFISGITGLLIPALLITVLPVTEGAYITTSSGKEVLLYGKLLSSPVIYWYMLFGLTSELFLSSLFLADFAREQRSEDTYRLYRRNAIVLGPATLVTAIIALVVMEPETHWLMQGLIKQFPWFTVSILLFVIGYSSLWWTNKKYDSLGWPRIAVLAVVAQYAFASYAYGVAHLPYIIYPDVTVFTSFTTKETFYALLILYAIGIAILLPGFIFFWNLFLKDRTFLKEK
>NZ_CP007626.1|WP_018781264.1|2142253_2143609_+|cytochrome-ubiquinol-oxidase-subunit-I
MDTVTLSRAFFGSSLAFHIIFATLGIGLSLMIFISEVLYHWRKDSDYAVMAKRWTKAFAILLGVAIPTGTIVGVQISLLWPGFAKIVGQVISVPFQIEIFAFFLEALFMSIYVYAADKLPPFMRLISLFFVMLGATASAVLITSANTWMNTPAGFSMNPDGSVFNVDPWKAFFNPSFFTSSLHVVITAYATGAAVIASIAGFKLLKRNLGAREIAYHKKGLFLGLVVTFITGATMWLSGHESAIALHEHSPEKLASAEALFETTSHAPLSIGGVVNPETLELNYALEIPNMLSMLVGFNPNTVVKGLNEFPQETWPPFYTHTFFNLMVGTAAFTFAVAAIALVYWYFIYRKKGAELPKWLLWATAACGPIMMLGIEFGWVFSCSGRQPWTIYGMQRTMDAATRADFVGPLFILFIILYIGLGALTIFVLRTFFRRHPLKNDLGQQGGDPRA
>NZ_CP007626.1|WP_018781265.1|2140634_2141720_-|hypothetical-protein
MRKRLYIWIALTLFMVLGGIVFWTALQGNRTEYFIMRHMMNENGTLATYRIADSKVGTNEATGREALSESSGLWLQYTLDMDDQSLFDEQVKVIQNYFIHPVHIVLWKISETGERQAGTNALIDDLRIIEQLYRAYDMYKEERYKHLADQVSDAVLRYNKKKKIYVDYYDADKGMQNNILTTSYINPSAFSYMKKYGKISETQYQEAIQFLTDYPRRGWAFPKEYKEDGTFTYENRVNLIDQSHIAYHRSLGGISSEAYLEFIKKVFRKDGKLYGRYDLETGKPVVDFESPAVYGLTILYVLQVGDKKFAQELYERMSEFRNDNVFSRFYGGYVTGKENNTHIFDNVLPLLAETELKMDKK
>NZ_CP007626.1|WP_003205094.1|2139095_2140265_+|acyltransferase
MEKEMETMTHSAPEFKVLQSIAFLAVVLQSSLLYTMNQGHILLEQSLIMGMLFNLAKFSAPAFIFIVGFHLIQQYTKQMVYTEYIYEKTAHLLAPYFFWSVVYLLTTNQVVTVQSGIKSLLLGTAAPHLWYVIMMFQIHLLFPLLCTLFYWFKKRTQNQQDIYRYMAAFASIYFLLMWYSSHYIFNGEVLTQSTVLHYTDRSFFFYSFYFVMGGIAAVALQAWRLFVMKHIPLITILFFILFLFINYELFSFYGVDSIHLTVSTYLKPSMFLYIVCEILILYVLSIMIVQRRGALYKTLRFIGNYTYGAYLAHFFFLQLITKLLSLFTIQANTILYSLLLFLLTATFSIITMVICSTIPFHTWITGPSPTPVLKWPTLLPLLPLLRSKK
>NZ_CP007626.1|WP_018781256.1|2153258_2155187_+|LTA-synthase-family-protein
MKESLKSQFHNVRFTLFVALALWLKTYIITRTSFDLKLESFMQEFILFISPLATSLLLVGLALFAKGKKRNYIALGIDFVLTIVLVGNVMFYGFYNDFVTLPVLGQTSNFGQLGSSVKELLNYKIIVAFADIILFFVLLKKKKDFAKTERVSRPMRSLYFVSTVAIFFANLGLAETERPELLTRSFDRVMLVKNLGLYTHQLYDLGLQAKSSSQKAFADGSKLQETENYVKTLKEKPDPNMFGVAKGKNVIVVSLESLQTFLIGATVNGQEVTPFLNQFTKESYYFDNFFHQTGQGKTSDAEFLVDTSLYPLDRGAVFFTHGNNEYTATPEILRQQGYYTAVFHANNATFWNRNIMYPALGYDRYYNELDYKITPETKLNWGLKDIEYFNQSVDMLKQVKKPFYTRFLSLTNHYPFTYDDGTKLIEPYNSGDGVFDRYMVTARYLDEALKNFIERLKAEGIYDNSVIVFYGDHYGISENHNRAMAQFLGKEEITTFDHMNLQRTPMFIHVPGQKEGKTISKPTGEIDIKPTILNLLGVDSSNDISFGHDVFSPDYKSFVVLRDGSFITEQYIYTNNTFYNRETGEIVEVPKEEAQAMIDRAQNELHMSDKLIEGDLLRFSESNKIKTGEVKTIIKEDKKGAE
>NZ_CP007626.1|WP_033794465.1|2155617_2156502_+|D-amino-acid-transaminase
MGSKMAYERFVLWNDTIIDTNNKQPYIQLEERGLQFGDGVYEVIRIYKGNIHLLDPHLTRLYRSMDEIELTLPFSKAELITLLYKLLENNNFQEDGTIYLQVSRGVQHRAHAFSFNVTPTIYAYISKKERPALWIEYGIRAISEPDTRWLRCDIKSLNLLPNVLAATKAERKGCKEALLVRNGIVTEGSHSNFFLVKNGILYTHPANHLILNGIIRQYILSLAHKLQIPVQEELFSIRDVYNADECFFTGTTVEVLPMTHLDGTAIQNGQVGPITKLLQKTFVQSFSTSNISLP
>NZ_CP007626.1|WP_018781254.1|2156712_2158425_+|SH3-domain-containing-protein
MKKYLAGLAAVSVAGGAAPTLDSVQAAPENTQKPATQTVQAAPQNNSNYTVTADVLHVRSGASTSHDIISRVYEGQTLNVIGEENGWVKINHNGKTGYVSGQFVSKNGTTPNVSTGGKNKVTADVLRVRTSPNTSSSIMGRVYEGQTLQVISIENGWIKINHNGKTGYVSGQFISGISSNAGSSNNNNVQAASGNYTVNVSSLRVRTGPSASHTVLGSVHKGQVVQVVGEVQDWFKINYAGQTAYLSKDYVTKGGSSNDVVQGNDQQQEINNNVTVQTGGTYVVNTTSLRVRTGPATYHGVLGGVLNGQTLNVTGVENGWYKINHHGKTGYVSSEFVKFVKGGTTTPEQPNQPEQPQTSVGEYYINAAALNVRSGEGTNYSVIGALPQGQKVQVTSEHYGWSKINYNGRTGYVGTRFLSKTPVGGAVDNKPNNSNNNNNQNNNNNAGNTSGNTSSILAYAKSMQGVPYVWGGTSANGVDCSGYIFHVFNKFGHNISRQTVAGYWSSLPKTSNPQPGDLIYFQNTYKPGPSHMGIYLGGGSFIQAGDNGVKIVSMNNSYWSSHFLGYTKAP
>NZ_CP007626.1|WP_018781252.1|2158791_2158956_-|hypothetical-protein
MDRSGQGLFSPHAELKTKGEKESRSPFVFMAGTYPSKNKVGDGSFILYKYKLKK
>NZ_CP007626.1|WP_006097494.1|2159294_2160506_+|NupC/NupG-family-nucleoside-CNT-transporter
MNVLWGIGGVIGILAVAFLLSSNRKAINWRTILIALALQITFSFIVLRWDAGKAGLKVASDGVQGLINFSYEGIKFVAGNLLDKDGPWGFIFVIQALLPIVFISSLVAILYYLGIMQWFVSIVGGALSKLLGTSKAESLNAVTTVFLGQTEAPILIKPYLTRLTNSEFFTIMVSGMTAVAGSVLVGYAAMGIPLEHLLAAAIMAAPSSLLIAKLIMPETEKPDNNVQLSTEREDANVIDAAARGASEGMQLVINVAAMLMAFIALIAVLNGLLGWVGSWFHIKLSLDLIFGYILSPFAILIGVSPNEAVQAASFIGQKLAINEFVAYANLGPHMSELSDKTNMILTFAICGFANFSSIAIQLGVTGTLAPSRRKQIAQLGIKAVIAGTLANFLNAAVAGMMFL
>NZ_CP007626.1|WP_006097495.1|2161249_2162764_-|BCCT-family-transporter
MRKLTKTFIVSLTLCIAFTIWGIIPESIIGKGNLGNVTTAIQTALVSKFGWFYIISVSVFLGLAIFLIFSKYGSIRLGKDDDKPDYSYMTWFAMLFSAGMGIGLIFWGVAEPLNHLYTPPFGESATEESARLALRFSFFHWGLHPWGLYALVALCIAYFTFRKGKPSTISATVGSLFKSGEHGRIAHTFDVLAVFATVFGVATSLGLGAKQIAGGVSYLTSIPNSLTTQLVIIGVVTVLYMLSAQTGLDKGIKYLSNINIILAFALMAILLFAGPTNFIMNYFTSTIGSYIQELPSMSFRLSPLNEGGNQWIQSWTIFYWAWWIAWSPFVGTFIARISRGRTIREFVIGVLLVPTIIGALWFSVFGGTGIHMEMFDGANIYGQIKEMGTEIGLFAMLDHMGSIGPVLSVLAILLISTFFITSADSATFVLGMLTTNGSLNPPNRIKLVWGLVQAALAAILLYVGGLEALQTASIIAAFPFVFVIFFMAASLFKELQKEVRHHHK
>NZ_CP007626.1|WP_018781251.1|2163432_2164317_+|SH3-domain-containing-protein
MKKLIGIATAAVFGLGIFTTSAKAETVVTTDVLNVRENPTTESQVVGKVLNGHKLDVTNTENGWSKIKLDGKDAFVNAEFTKSIYYVTANVLNVRAEANTNSEVLGTLKKDDMIETTNQVQNEWLQFEYNGKTAYVHVPFLTGTAPVIEKQETPAPAQAAAPAKAEAKAPAAQEKPAAKPAVKAAETNTPSGGRELTVEATAYTAHPSENGGTYGGRVLTAMGHDLTANPNMKMIAVDPKVIPLGSKVWVEGYGEAIAGDTGGAIKGNRIDVLVGSDSAANKWGRKSVKVKILK
>NZ_CP007626.1|WP_006096935.1|2164562_2164856_+|DUF3910-family-protein
MNPHAKIDWIGTPKPYIYKDDVTYDGATIDFSLEHDDNRYKLIVLKHDQSVQYKFVQYGTKPGSQKPFPIDIPFQEEMLPLVERILQDPYVQACRIL
>NZ_CP007626.1|WP_018781249.1|2164914_2166294_-|hypothetical-protein
MKFCGTCKKQVADYLNFCSECGGKVEVIEENVAASRADVQREMQPKKSKKNIVLLIVFVVLAALLFGAYKFGAYKFSKEKQINALIDAFNKKDINTIDSLIKSDDPGLKIKIEDIKSYLRYLKDSPSYNKELLSYLQKQTVDTKLVNKESFVDGQIVEDGKEWFLYPKYKFSIKSYFMTVSTTAKNAEVYVNDKKTADISSEKSSKEIGPYFPGTYVVKAKAKAELTELETEKEVELAGEKEGKVDVKLPLEGKYVTISSDENSANVFVNGKKRGKLEYGSYKLGPVPTDGTVEVHLEKQTDFGVVKTESVKIGDEGSSYYLKFPKQTSDTAVGDFVRTHIYNNVRAISLNDFSLIENDYDKSGKSYKEDRDYLQYLKKKGITEDLLKFEVRNVERQSSTKYKVTTYEEYNIRYGDGSVKFKSFSNEHIVTVNADGKLMYHSISANNTLKTEDVSGPTH
>NZ_CP007626.1|WP_018781248.1|2166306_2167845_-|zinc-ribbon-domain-containing-protein
MYCRMCGNQHGEEVNYCPNEGSMTMVSGDSVVLEQDNSKYCRDCGNENAEQNLYCQKCGHSLFTVKKKEHIVKLPSMEKGHKVELGLHKGGLKTGIIGGAIASALMLLAGWLGSLAVSEMMKKIFHEFARELTMLPDFYASTTSTLLSYHLLGFSAGDEGGIVMSLSWHTPFFLLLIIPFVILCGVGIWIGKQRVAKTIGEQIVLAATVGIMYGLFLFVISFIASQSVTFPEVGTITVGYSSLKSLVSGFIYGTFFSLFGLIAHTSRNNIADAFQELLPYGASLYHGMAAMVKGLLLTAAIFCVTTFIALSGSNAKPFEDVAPTISARAMMALQLTPNVWSMTHFAPVEIKVPALQKEMSKVMTTGDKSMIELSFISGVSAGGVKIKDILIAEGAPLSAMESFDEINGKFHLGLLLLMIPVFFMFRAGQKLARVPFSNMYVTLAVCSGAYTIMMIVMNLLSKIEINIAGKLTKEFGVGGTVFSMQGGWIYLILGSFILTYAAAFAGMKLARK

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Crispr_ID: NZ_CP007626_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_5

2631706-2631811

Orphan

Consensus_repeat	Method
AAAGAGAATGAAACAGAAAAACCAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007626_5

>merge|NZ_CP007626|5|2631706-2631811|CRISPRCasFinder
AAAGATAAAGAGAATGAAACAGAAAAACCAACAGAAAAACCAACAGAAAAACCAAAAGAAGAACAGAACAAAGAATCTGAAAAAGAGAATGAAGCAGAAAAACCAA

>NZ_CP007626|5|4|2631706-2631811|CRISPRCasFinder
AAAGATAAAGAGAATGAAACAGAAA	AACCAACAGAAAAACCAACAGAAAAACCAAAAGAAGAACAGAACAAAGAATCTGAA
AAAGAGAATGAAGCAGAAAAACCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_018781988.1\|2636079_2636925_+\|DUF2785-domain-containing-protein	unknown	unknown	gnl\|CDD\|371322
NZ_CP007626.1\|WP_006093093.1\|2620580_2620799_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_029427353.1\|2637456_2637750_+\|TnsA-endonuclease	unknown	unknown	unknown
NZ_CP007626.1\|WP_040119079.1\|2638481_2639996_-\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|227588
NZ_CP007626.1\|WP_018781989.1\|2640718_2641969_+\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP007626.1\|WP_018767167.1\|2637766_2638222_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225980
NZ_CP007626.1\|WP_003194411.1\|2628429_2629323_+\|arginase	unknown	unknown	gnl\|CDD\|212515
NZ_CP007626.1\|WP_018781992.1\|2643259_2643469_-\|DUF3951-domain-containing-protein	unknown	unknown	gnl\|CDD\|315734
NZ_CP007626.1\|WP_018781990.1\|2642007_2642454_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_006093094.1\|2619417_2620182_-\|polysaccharide-deacetylase-family-sporulation-protein-PdaB	unknown	unknown	gnl\|CDD\|200573
NZ_CP007626.1\|WP_018781991.1\|2642738_2643242_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018783613.1\|2615829_2616543_+\|N-acetylmuramoyl-L-alanine-amidase-CwlD	unknown	unknown	gnl\|CDD\|274337
NZ_CP007626.1\|WP_003204777.1\|2629574_2630402_+\|TIGR00159-family-protein	unknown	unknown	gnl\|CDD\|224539
NZ_CP007626.1\|WP_003205520.1\|2617830_2618451_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380050
NZ_CP007626.1\|WP_003194397.1\|2615334_2615763_+\|DUF2521-family-protein	unknown	unknown	gnl\|CDD\|371213
NZ_CP007626.1\|WP_006097148.1\|2633667_2635470_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	unknown	unknown	gnl\|CDD\|234729
NZ_CP007626.1\|WP_018781984.1\|2627063_2628209_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP007626.1\|WP_018767176.1\|2631838_2633185_+\|phosphoglucosamine-mutase	unknown	unknown	gnl\|CDD\|237670
NZ_CP007626.1\|WP_006093095.1\|2618589_2619204_+\|KinB-signaling-pathway-activation-protein	unknown	unknown	gnl\|CDD\|372908
NZ_CP007626.1\|WP_018783612.1\|2616691_2617759_+\|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl\|CDD\|378455

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_018781988.1\|2636079_2636925_+\|DUF2785-domain-containing-protein	gnl\|CDD\|371322	pfam10978, DUF2785, Protein of unknown function (DUF2785). Some members in this family are annotated as hypothetical membrane spanning proteins however this cannot be confirmed. The family has no known function.	1.57017e-62
NZ_CP007626.1\|WP_018767176.1\|2631838_2633185_+\|phosphoglucosamine-mutase	gnl\|CDD\|237670	PRK14316, glmM, phosphoglucosamine mutase; Provisional.	0
NZ_CP007626.1\|WP_040119079.1\|2638481_2639996_-\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|227588	COG5263, COG5263, FOG: Glucan-binding domain (YG repeat) [General function prediction only].	3.4102e-45
NZ_CP007626.1\|WP_018781989.1\|2640718_2641969_+\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.15599e-106
NZ_CP007626.1\|WP_018767167.1\|2637766_2638222_+\|transcriptional-regulator	gnl\|CDD\|225980	COG3449, COG3449, DNA gyrase inhibitor [DNA replication, recombination, and repair].	1.30591e-49
NZ_CP007626.1\|WP_003194411.1\|2628429_2629323_+\|arginase	gnl\|CDD\|212515	cd09989, Arginase, Arginase family. This family includes arginase, also known as arginase-like amidino hydrolase family, and related proteins. Arginase is a binuclear Mn-dependent metalloenzyme and catalyzes hydrolysis of L-arginine to L-ornithine and urea (Arg, EC 3.5.3.1), the reaction being the fifth and final step in the urea cycle, providing the path for the disposal of nitrogenous compounds. Arginase controls cellular levels of arginine and ornithine which are involved in protein biosynthesis, and in production of creatine, polyamines, proline and nitric acid. In vertebrates, at least two isozymes have been identified: type I (ARG1) cytoplasmic or hepatic liver-type arginase and type II (ARG2) mitochondrial or non-hepatic arginase. Point mutations in human arginase ARG1 gene lead to hyperargininemia with consequent mental disorders, retarded development and early death. Hyperargininemia is associated with a several-fold increase in the activity of the mitochondrial arginase (ARG2), causing persistent ureagenesis in patients. ARG2 overexpression plays a critical role in the pathophysiology of cholesterol mediated endothelial dysfunction. Thus, arginase is a therapeutic target to treat asthma, erectile dysfunction, atherosclerosis and cancer.	1.51217e-152
NZ_CP007626.1\|WP_018781992.1\|2643259_2643469_-\|DUF3951-domain-containing-protein	gnl\|CDD\|315734	pfam13131, DUF3951, Protein of unknown function (DUF3951). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 56 and 71 amino acids in length. There is a conserved YTP sequence motif.	2.44345e-14
NZ_CP007626.1\|WP_006093094.1\|2619417_2620182_-\|polysaccharide-deacetylase-family-sporulation-protein-PdaB	gnl\|CDD\|200573	cd10949, CE4_BsPdaB_like, Putative catalytic NodB homology domain of Bacillus subtilis putative polysaccharide deacetylase PdaB, and its bacterial homologs. The Bacillus subtilis genome contains six polysaccharide deacetylase gene homologs: pdaA, pdaB (previously known as ybaN), yheN, yjeA, yxkH and ylxY. This family is represented by the putative polysaccharide deacetylase PdaB encoded by the pdaB gene on sporulation of Bacillus subtilis. Although its biochemical properties remain to be determined, the PdaB (YbaN) protein is essential for maintaining spores after the late stage of sporulation and is highly conserved in spore-forming bacteria. The glycans of the spore cortex may be candidate PdaB substrates. Based on sequence similarity, the family members are classified as carbohydrate esterase 4 (CE4) superfamily members. However, the classical His-His-Asp zinc-binding motif of CE4 esterases is missing in this family.	3.11389e-114
NZ_CP007626.1\|WP_018783613.1\|2615829_2616543_+\|N-acetylmuramoyl-L-alanine-amidase-CwlD	gnl\|CDD\|274337	TIGR02883, spore_cwlD, N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Cellular processes, Sporulation and germination].	1.83894e-109
NZ_CP007626.1\|WP_003204777.1\|2629574_2630402_+\|TIGR00159-family-protein	gnl\|CDD\|224539	COG1624, COG1624, Uncharacterized conserved protein [Function unknown].	1.04782e-107
NZ_CP007626.1\|WP_003205520.1\|2617830_2618451_-\|hypothetical-protein	gnl\|CDD\|380050	pfam17898, GerD, Spore germination GerD central core domain. This is the central core domain found in GerD from a thermophilic Bacillus. GerD plays a critical role in nutrient receptor-mediated spore germination in Bacillus species. The crystal structure of GerD reveals this domain as a trimeric superhelical rope fold. Alterations in GerD structure have profound effects on spores' nutrient germination.	8.79691e-43
NZ_CP007626.1\|WP_003194397.1\|2615334_2615763_+\|DUF2521-family-protein	gnl\|CDD\|371213	pfam10730, DUF2521, Protein of unknown function (DUF2521). Family of unknown function specific to Bacillus.	1.86756e-59
NZ_CP007626.1\|WP_018781984.1\|2627063_2628209_+\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP007626.1\|WP_006097148.1\|2633667_2635470_+\|glutamine--fructose-6-phosphate-transaminase-(isomerizing)	gnl\|CDD\|234729	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase.	0
NZ_CP007626.1\|WP_006093095.1\|2618589_2619204_+\|KinB-signaling-pathway-activation-protein	gnl\|CDD\|372908	pfam14089, KbaA, KinB-signalling pathway activation in sporulation. This family of small proteins is found in the membrane and is necessary for kinase KinB signalling during sporulation. There is a conserved GFF sequence motif. The initiation of sporulation in Bacillus subtilis is dependent on the phosphorylation of the Spo0A transcription factor mediated by the phospho-relay and by two major kinases, KinA and KinB.	4.45538e-78
NZ_CP007626.1\|WP_018783612.1\|2616691_2617759_+\|Mrp/NBP35-family-ATP-binding-protein	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	3.33751e-115

>NZ_CP007626.1|WP_003204777.1|2629574_2630402_+|TIGR00159-family-protein
MPFGDMNLLKYLSTILDIAVVWFVIYKLILVIRGTKAVQLLKGITVIIIVRILSYLFELHTLQWLTDQALTWGFLAIIIIFQPELRRALEQLGRGSLFSRGIGQEEEEHEIVANAVAKATEYMGKRRIGALITLSRETGMGDYVETGIPLNANVSSELLINIFIPNTPLHDGAVIMQGNTIKAAACYLPLSESPFISKELGTRHRAAMGVSEVTDSITVVVSEETGQISLTKNGELHRDLKVEQLKEMLLAEFSGNVKTTSSSLWNWNWRRKRHG
>NZ_CP007626.1|WP_003194411.1|2628429_2629323_+|arginase
MKKEISIVGVPMDLGQMRRGVDMGPSAIRYAGVIERIQNIGYDVEDIGDLCIEREQEIDENTKLRNLTQVAHVCDELASKVDHIIEKGRFPLVLGGDHSIAIGTLAGVAKNYKNLGVIWYDAHGDLNTEETSPSGNIHGMSLAASLGYGHPSLVNLYEAYPKVKKENVVIIGARALDEGEKEFIRNEGIKVFTMHEIDRMGMTAVMEETIAYLSHTDGVHLSLDLDGLDPHDAPGVGTPVTGGLSYRESHLAMEMLSEADIITSAEFVEVNPILDEKNRTATTAVALMGSLFGEKLK
>NZ_CP007626.1|WP_018781984.1|2627063_2628209_+|glycerate-kinase
MKIVIASDSYKESLRAIEVCKAIEKGFTKIFPEAEYVKVPIGDGGEGTVQSLVDATGGKIIPLHVTGPLGERVEAFYGISQDKRTAFIEMAAASGLQHVSVKKRNPLITTTKGTGELILDALDKGVQHIILGLGGSATNDGGAGMLSALGVKFLEKDGRVIEPVGGNLHSIDSLDLLKLDSRLAHVKLEAACDVDNPLTGQKGASFVFAKQKGASAEMIAQLDDNLKRYAHVLKKYLHIDVEEIAGAGAAGGLGAAVAAVLQGELRKGIEIVLDYTNFDEHIKEADLVLTGEGRIDVQTAYGKAPVGIARRAKKLHIPVIAIGGSVLPNHISVYKEGIDAVFAATSSPMTLEEAYITAKENIEMSARNIASVWKIASERRL
>NZ_CP007626.1|WP_006093093.1|2620580_2620799_+|hypothetical-protein
MLGIMITKEEQKEIEYVLKRELDELLFDFADERIHDVVKKTMEERYKILFCLFRRVANAEECIRYVRKRIFY
>NZ_CP007626.1|WP_006093094.1|2619417_2620182_-|polysaccharide-deacetylase-family-sporulation-protein-PdaB
MFFFFITSKRKFKHISLIIILSLFTAWLLFFKTYSHQSAFSTATGPKVIYKGDTAKKQVALTFDISWGDKKAVPILDTLKEREIKNATFFLSAAWAERHPDIVERIIQDGHEIGSMGYNYTSYTSLEANEMRRDLLRSQDVFTKLGIKQVKLLRPPSGEFNKTVLKVAESLGYTVVHWSNNSNDWKNPGVNKIVSTVANNLRGGDIVLLHASDSALQTNKSLPLLLQKLKSDGYEQVSVSQLISNTSARSNDIK
>NZ_CP007626.1|WP_006093095.1|2618589_2619204_+|KinB-signaling-pathway-activation-protein
MNSRKWVRLFLTTLLLGGISTILIGFILGWDKYAKFFQNFDGKEILMISFWLLGVGFIFSVISQMGFFAYLTVHRFGLGMFRSSALWNAVQLFFIAFVLFDFVYLRSVLVANGDVSFGNNILVAGMLFLFGALVAYIKSKETNKKAFIPALFFMVVVTILEWVPALRINDTDWLYLMVIPLLLCNAYQLLILHRLIGQRSKSVS
>NZ_CP007626.1|WP_003205520.1|2617830_2618451_-|hypothetical-protein
MKRMLLVLVSSLLFTVLVACAQGKEAKSELDYDQTKKMIVDILKTDQGKKAIQDVLTDEKMKQALILDETVVKKTIEDAMVSEKGQQLWEKLFKDPEFSAKFAKSISKEQTALMKTLLKDPEYQAGVIEIMKNPEVEKMMLQTMKSKEYRQYLQQVLTESAESPLFQTKIIDIISKGIEKAEKSGGSEKKESGGEGGSKGGSKEQK
>NZ_CP007626.1|WP_018783612.1|2616691_2617759_+|Mrp/NBP35-family-ATP-binding-protein
MVTKEQVVEALEGINDPFLHKTLKETNAIKEVNIKPEKEHVSVKIAIVKTGTAEQMQLQATIVKLVKELGAATVGLRFAEFTEEELAQFAPPQEEKESQSLLSEHSKTTFLAVASGKGGVGKSTVSVNLAISLARLGKKVGIIDADIYGFSVPDMMGIEKRPIVRGDKIIPVERLGVKVISMGFFVEDNAPVIWRGPMLGKMLNHFFTEVEWGDLDYLVLDLPPGTGDVALDVHSMLPSCKEIIVTTPHPTAAFVAARAGAMALRTEHSILGVVENMAYFESKVTGEKEYVFGKGGGDKLAAELQTDVLGRIPLQQPDWNKEDFAPSVYEDTHKTGVIYRTIAEQVIDRTSVKQK
>NZ_CP007626.1|WP_018783613.1|2615829_2616543_+|N-acetylmuramoyl-L-alanine-amidase-CwlD
MKRIRIISFMLAAVVLFFLVKQEFQIAKSWRAWNLPLSGKVIVLDAGHGGPDGGAVGGKDIVEKDITLEITKMVQDYLQEQGALVILTREGDYDLADKDTKSYSRRKAEDLKKRVEIINKPDVDFFVSVHLNALPSSSSKGAQTFYYRSLIENERAAKFIQAELRTSLENTNRSAKTISRVYLLKYAKTPGALVEAGFLSNVNERYMLNSEKYQQKVAAAIYRGILRYFTEKGNPPE
>NZ_CP007626.1|WP_003194397.1|2615334_2615763_+|DUF2521-family-protein
MNVIVSLQEKQKEKQLKYERKMLRELSLKTLRSNIRDAFDMKELHRQYEDYCIELGIESYLLGARYSKFGYYGESFFDVKYRALEEEQQLTEMLFQFLTSMTMREIESNDKELLYESCEQFISSWWREGYEKGERRYRLKLH
>NZ_CP007626.1|WP_018767176.1|2631838_2633185_+|phosphoglucosamine-mutase
MGKYFGTDGVRGVANKELTPELAFKIGRFGGYVLTKDTDRPKVIIGRDTRVSGHMLEGALVAGLLSTGAEVMRLGVISTPGVAYLTKALDAQAGVMISASHNPVQDNGIKFFGSDGFKLTDEQEAEIEALLDKEVDELPRPAGTELGQVNDYFEGGQKYLQYIKQTVEEDFSGLHIALDCAHGATSSLAPYLFADLEADISTMGTSPNGMNINDGVGSTHPEGLAELVKEKGADIGLAFDGDGDRLIAVDEKGNVVDGDQIMYICAKYMKETGQLKHNTVVSTVMSNLGFYKALEANGITSDKTAVGDRYVMEEMKRGGYNLGGEQSGHIILLDYITTGDGMLSALQLVNIMKMTKKPLSELAGEMTKFPQLLVNVRVTDKKLALENEKIKEIIRVVEEEMNGEGRILVRPSGTEPLIRVMAEAPTQELCDGYVHRIVEVVKAEVGAE
>NZ_CP007626.1|WP_006097148.1|2633667_2635470_+|glutamine--fructose-6-phosphate-transaminase-(isomerizing)
MCGIVGFIGDQDAKEILLKGLEKLEYRGYDSAGIAVQAENGVVVFKEKGRIAKLREIVDENVAASVGIGHTRWATHGVPSKVNAHPHQSTSKRFTLVHNGVIENYELVKKEYLQDVTFVSETDTEIIVQLMEQQVNTGLSVEDAFRQTLSILHGSYAIGLLDAENPNMIYVAKNKSPLLVGVGDNFNVVASDAMAMLQVTDQFIELMDKEMVIVTQESITIKNLQGETIERAPFTAELDASDIEKGTYPHFMLKEIDEQPLVIRNIIQKYQNEDGEIELDEDIRNAILDSDRIYIIACGTSYHAGLVGKQFIEKFAKVPVEVHVASEFSYNMPLLTERPFFIYISQSGETADSRAVLVQTNEMGHKALTITNVPGSTLSREADYTLPLYAGPEIAVASTKAYTAQLAVLSILAADIAKAKGEVLDFDLTHELGLVANAMEVLCNQKEEMDALAKQFLATTRNCFFIGRSVDFYVGLEGALKLKEISYIQAEGFAGGELKHGTIALIEKGTPVIALATQEHVNLGIRGNVKEVVARGANPCIIAMKGLEMEGDSFVLPAVHEALAPLVAVIPLQLISYYAALHRECDVDKPRNLAKSVTVE
>NZ_CP007626.1|WP_018781988.1|2636079_2636925_+|DUF2785-domain-containing-protein
MSDTRTKLMLDLQRIEKDKYQLREGEQHQDFLPLLLQYIGDPQPELRDNLIYPMFYMWIKEENKFSGEELRSLLTVLTDENHLFYNIGSEDDQSVFTRTFSALPIALIVQRHRQNPFFNQAEIEQLMHAMLRYYKEEKDLRGYLSVGGWAHSASHGADIFVELVQCEESSVALLREVLVAISGMLHNGRHIFSDEDDERLVNIVDTMIDKELLPHQEIADWISGLAQCCNLPRSRSQVIARVNSKNFLRSLYFRRGQDIRGDELNTVMLGTEAKLNRFSIS
>NZ_CP007626.1|WP_029427353.1|2637456_2637750_+|TnsA-endonuclease
MKGIKTSRQHEFLSDLERNYFYITEYSYFVIADELGIKHPTDPKTGEPIVMTKDFLLSVELENDKCKYLKYMSKILKNAVYSILYRSNLVMNKLFIL
>NZ_CP007626.1|WP_018767167.1|2637766_2638222_+|transcriptional-regulator
MDIMIEKIPAYRIAYIREIGPYGIDNVRTMEKLKEWAKSNHLFNDESIILGIAQDNPETTKLENCRYDTCIVVSNDYAVTDDYVREGNIVGGKYAVFKINHTAEAVQKAWVDIFPELSGQGYQFDEARPIIERYVVKMVNNHHCEICVPVY
>NZ_CP007626.1|WP_040119079.1|2638481_2639996_-|N-acetylmuramoyl-L-alanine-amidase
MLKKAASIILASSILFIPIKGMAETVSTYNTAIKTNETVKKGWLQNNNNWYFLNSSGVMQTGWLFDSGAWYYLNSNGAMKTGWLFDKGAWYYLNSNGAMKTGWLFDKGAWYYLNSNGAMKTGWLFDNGVWYYLNSNGAMKTGWLFDNGVWYYLNSNGPMKTGWLFDNGVWYYLNSNGTMKTGWLLDGNQWYYLNSNGTMKTGWLQEGSTWYYLQLNGVMQTGFASIDGTTYYFNNSGTWIPENNITATSYINLDLTYASNVTGKEIDADIKKYQPDSPLIGHGNDFVAAQAQYGVNALYLAAHAILESGYGKSEIAYRKHNLFGLRAYDQDPFKYAKYLPTFGDSIAYNANYVRDKYLEKNGSYYYGPTLQGMNVMYSTDQEWSTKIAKIMERIKPFQKQDYLYAKKLPKNPNTLNVDALSNNIPYKTYLQGTKATAKLAAFYYVVPYSFDGVIKSQSVTENNQGTLALGTSVFVHREDPNGWVEFSFTINGNKYWILKTKLNM
>NZ_CP007626.1|WP_018781989.1|2640718_2641969_+|multidrug-effflux-MFS-transporter
MNESNHDVYKPVRVNRLWMILVLGTLTAIGPLSIDMYLPSLPKLTDDLQTNASLAQLTLTACLLGLSVGQLFVGSISDIYGRRKPLIIALIIYVASSLLCAVAPSIWSLVLLRFLQGASGSAGIVISRAMVRDMYAGSEMTKFFSLLMLVNGAAPILAPIIGGQLLQFTSWRGVFIVLGVISVFMLVSAIFVLRETLPLEERETGGLAGTLATYGNLLKDRLFMGYALSQGLVSAAMFAYISGSPFVLQNIYGASPQAFSLFFAINGIGIIIASQITGRLAGKVNETTLFVMGVGIAAVGGLSLLLMIVLGAGLIGVLCSLFLVVSSVGVVSTTGFSLAMRNQKQAAGTASALLGLLQFISGALVAPLVGIGGSNTALPMGIVIALCEVGAVLCYIFMAKRSERQFVLREKQDIEA
>NZ_CP007626.1|WP_018781990.1|2642007_2642454_-|hypothetical-protein
MYNKMMFMEEELSVLIRKRSLHIKNTESLRRVLKKRTAPLRLARYLKQVHIDKYNTALNISDESLTIEIIGHVYIGNFADILKAIPRIPKIAPIIVERAYRITNHTDIIDCGEKEVDSNRWVWDKLAILYDAIMNNMYELLQENNKKS
>NZ_CP007626.1|WP_018781991.1|2642738_2643242_+|hypothetical-protein
MKKVWSIVLLGGMLLLAGCNGDKDTKEPKEKVEQSAEQKEDMRVYRDVHNKYDEKMNKELNEAVKLWEEAKEKGGKALVYPKFKEDVQKVTTSMLTDIDHMRKEIRVPKSKEQEHELYVGFLNETEQAMKKLEKLAKDEDSALIRDIEVHFSTASTYYKRFQKEAQK
>NZ_CP007626.1|WP_018781992.1|2643259_2643469_-|DUF3951-domain-containing-protein
MDPLLMAVIGLPLTIVILVIIGFYKLFIKKKNITSFYTPFDNITGQTISEFHEEQKVLVAEDEDGKKKK

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Crispr_ID: NZ_CP007626_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_6

3620611-3620721

Orphan

Consensus_repeat	Method
TAGCAAGTAAATCGGGCCAGTTAACAA	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_CP007626_6

>merge|NZ_CP007626|6|3620611-3620721|CRISPRCasFinder
TAGCAAGTAAATCGGGCCAGTTAACAAGTGGGGTAAGTGCTTTACTAGATGGTTCAGGTCAAGTAACAGGTGGTTTAAATACATTAGCAAGTAAATCAGGCCAGTTAACAA

>NZ_CP007626|6|5|3620611-3620721|CRISPRCasFinder
TAGCAAGTAAATCGGGCCAGTTAACAA	GTGGGGTAAGTGCTTTACTAGATGGTTCAGGTCAAGTAACAGGTGGTTTAAATACAT
TAGCAAGTAAATCAGGCCAGTTAACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_018782663.1\|3607598_3608534_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|183526
NZ_CP007626.1\|WP_040119291.1\|3623197_3624139_-\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP007626.1\|WP_040119292.1\|3626464_3627454_+\|lipoate--protein-ligase	unknown	unknown	gnl\|CDD\|161920
NZ_CP007626.1\|WP_018782658.1\|3616752_3617610_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_000567010.1\|3625389_3625518_-\|YhfH-family-protein	unknown	unknown	gnl\|CDD\|379490
NZ_CP007626.1\|WP_018766603.1\|3611156_3612032_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP007626.1\|WP_018782656.1\|3621960_3622383_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|371246
NZ_CP007626.1\|WP_018782661.1\|3612133_3612967_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP007626.1\|WP_080740362.1\|3621721_3621820_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018782662.1\|3608558_3609980_+\|protoporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|237009
NZ_CP007626.1\|WP_006093885.1\|3625718_3626453_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293802
NZ_CP007626.1\|WP_040119289.1\|3613087_3613828_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235506
NZ_CP007626.1\|WP_016113707.1\|3624335_3625349_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP007626.1\|WP_018766595.1\|3617973_3618546_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP007626.1\|WP_003195824.1\|3622578_3623103_-\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981
NZ_CP007626.1\|WP_018782653.1\|3629281_3629809_-\|isochorismatase-family-protein	unknown	unknown	gnl\|CDD\|238496
NZ_CP007626.1\|WP_018766604.1\|3610326_3610635_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|223672
NZ_CP007626.1\|WP_040119290.1\|3614343_3616710_+\|endonuclease	unknown	unknown	gnl\|CDD\|225249
NZ_CP007626.1\|WP_018782654.1\|3627664_3629197_+\|fatty-acid--CoA-ligase-family-protein	unknown	unknown	gnl\|CDD\|236072
NZ_CP007626.1\|WP_003195789.1\|3610627_3611047_-\|tautomerase-family-protein	unknown	unknown	gnl\|CDD\|379645

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_018782663.1\|3607598_3608534_+\|ferrochelatase	gnl\|CDD\|183526	PRK12435, PRK12435, ferrochelatase; Provisional.	0
NZ_CP007626.1\|WP_040119291.1\|3623197_3624139_-\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	5.67624e-61
NZ_CP007626.1\|WP_018782653.1\|3629281_3629809_-\|isochorismatase-family-protein	gnl\|CDD\|238496	cd01014, nicotinamidase_related, Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.	7.61971e-41
NZ_CP007626.1\|WP_000567010.1\|3625389_3625518_-\|YhfH-family-protein	gnl\|CDD\|379490	pfam14149, YhfH, YhfH-like protein. The YhfH-like protein family includes the B. subtilis YhfH protein, which is functionally uncharacterized. Its expression is repressed by the Spx paralogue MgsR, which regulates genes involved in stress response. This family of proteins is found in bacteria. Proteins in this family are typically between 42 and 53 amino acids in length.	3.52581e-13
NZ_CP007626.1\|WP_018766603.1\|3611156_3612032_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	5.12442e-40
NZ_CP007626.1\|WP_018782656.1\|3621960_3622383_+\|hypothetical-protein	gnl\|CDD\|371246	pfam10787, YfmQ, Uncharacterized protein from bacillus cereus group. This family is conserved in the Bacillus cereus group. Several members are called YfmQ but the function is not known.	3.74779e-64
NZ_CP007626.1\|WP_040119292.1\|3626464_3627454_+\|lipoate--protein-ligase	gnl\|CDD\|161920	TIGR00545, Probable_lipoate-protein_ligase_A, lipoyltransferase and lipoate-protein ligase. One member of this group of proteins is bovine lipoyltransferase, which transfers the lipoyl group from lipoyl-AMP to the specific Lys of lipoate-dependent enzymes. However, it does not first activate lipoic acid with ATP to create lipoyl-AMP and pyrophosphate. Another member of this group, lipoate-protein ligase A from E. coli, catalyzes both the activation and the transfer of lipoate. Homology between the two is full-length, except for the bovine mitochondrial targeting signal, but is strongest toward the N-terminus. [Protein fate, Protein modification and repair].	1.02784e-134
NZ_CP007626.1\|WP_018782661.1\|3612133_3612967_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	2.15678e-50
NZ_CP007626.1\|WP_018782662.1\|3608558_3609980_+\|protoporphyrinogen-oxidase	gnl\|CDD\|237009	PRK11883, PRK11883, protoporphyrinogen oxidase; Reviewed.	0
NZ_CP007626.1\|WP_006093885.1\|3625718_3626453_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293802	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain. The tRNA maturase RNase Z (also known as tRNase Z or 3' tRNase) catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors. Two forms of RNase Z exist in eukaryotes, one long (ELAC2) and one short form (ELAC1), the former may have resulted from a duplication of the shorter enzyme. Only the short form exists in bacteria. Members of this bacterial subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	4.18248e-86
NZ_CP007626.1\|WP_040119289.1\|3613087_3613828_+\|SDR-family-oxidoreductase	gnl\|CDD\|235506	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional.	1.76517e-81
NZ_CP007626.1\|WP_016113707.1\|3624335_3625349_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	4.83089e-112
NZ_CP007626.1\|WP_018766595.1\|3617973_3618546_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	9.28868e-15
NZ_CP007626.1\|WP_003195824.1\|3622578_3623103_-\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	1.9313e-10
NZ_CP007626.1\|WP_018766604.1\|3610326_3610635_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	1.9594e-20
NZ_CP007626.1\|WP_040119290.1\|3614343_3616710_+\|endonuclease	gnl\|CDD\|225249	COG2374, COG2374, Predicted extracellular nuclease [General function prediction only].	2.11545e-73
NZ_CP007626.1\|WP_018782654.1\|3627664_3629197_+\|fatty-acid--CoA-ligase-family-protein	gnl\|CDD\|236072	PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP007626.1\|WP_003195789.1\|3610627_3611047_-\|tautomerase-family-protein	gnl\|CDD\|379645	pfam14552, Tautomerase_2, Tautomerase enzyme.	1.2969e-24

>NZ_CP007626.1|WP_018766595.1|3617973_3618546_+|TetR/AcrR-family-transcriptional-regulator
MAVDRKRSIIEAATKSFSAFGYKATTMDQVAKLANVGKGTIYTFFKNKEELFGEIISNLITEMKQVAKEAIRPDVSFFENVHRALYNILEFRKEHQLMIKLIQEERDMGTKEVQDVMQQVDVEIVSVIQSYLEIAIEKGEISKCDPEITAFIMLRLYVSLIFDWEKNHEPLEKERIAELFELYLLKGLSN
>NZ_CP007626.1|WP_018782658.1|3616752_3617610_-|hypothetical-protein
MIRALSLHIKQAFLNKISLTLLFSWLILVSIYHYFYILKYSGRVPDELLATAYKWIGFRDDEMDVYLLLMPVLAALPFSTSYNSDKADKFKSFVSKEVPFFPYVCTKYIVTFLSGGLLYILPFVFSLLFCKLTIQDGIPTPALSIIKDNGMFASLYFSSPITYISLYIGINFLFAGLMAVLGLSASIWSRKDYMAILFPFAITSLPYVVLNIVFPTIGGAPIHLYDPKQPLQGMSPYILIMQCTVFFGISLFMYMKGVQKDRKIYMRRLQKRIRCKKSIQKSVSM
>NZ_CP007626.1|WP_040119290.1|3614343_3616710_+|endonuclease
MNLKKLVSILLSFILLISFTGTLVKAEERSALSVQDAIQMFKQQGSSKGVVEGYIVGYTESSSKYTKDPRKFGDTNVAIADSPNETDPEKIMPVQLPKGDVRTAVNVKDHPENVGKKVRLTGTLELYFNSPGLKSVTAYKFQGETENRVSDVTASPNGGEIAKGTAVTLTTNTEGATIYYTLDGSVPTNKSIRYNEPIVLNENSVLKAIGVKEGLSSSAVATFSFTVVKNEQVRIHDIQGASHISPYNGKKVRNVEGIVTALDKNGFYMQDSQPDNDPATSEGIYVYKKEANVAAGDLVQIDGEVEEFIGSGYADRFDTDLSITEIKASNIAVKANNQQLPSAIVLGENGVKIPDQIIDNDAFGVFDPNEDAIDFYESLEGMRVTMPTPQIVGPQKNGNLYVTVANGGDKVTTKYGTPLLGENQFNPERLSLKVPRDYVAKAGDKFTGDITGVVGYDYGAYRISPVTELPSVTDGGFKQVGANIQPRLGKLTVATYNIENFSANAKETSDEKVKAIAYSIKYNLKMPDIIGVQEMQDNNGSINDGTTDASLSAKRIIDAVQEIRGPKYEYVEVAPQNNQDGGAPGANIRVGFFYNPSRVKLADKPKLLETNPTRIGQENSLFDNTRKPLAAEFTFQGQNIVVVSNHLNSKLGDATPFGKIQPLVLKSEEKRIQLAQEANNFVKEIQKRDVNAPVVIVGDMNDFEFSKPLQALKAENMQDMLETVSKENRYTYIHDGNAQVLDHILVTNNIAPHTVVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS
>NZ_CP007626.1|WP_040119289.1|3613087_3613828_+|SDR-family-oxidoreductase
MDIKDKVVIITGGGTGIGKATALKLASLGAKVVINYSRSEKEALEAVNEIKQRGGTAITLKANVAQKEEVEAMVSQTVRLFGTVDCLVNNASITAQIPMDDLESVTEEVWDSLFSVNVKGMFHCIKAVVPYMKKQKSGAIVNMGSVAGITGLGSSIPYAATKSAIHTMTKSLAIALAPDIRVNSISPGAVHTRWWSGNEEKMYQLAGNLPLQRISTPNDIAEAILFQLTQESITGQVFTIDNGQTL
>NZ_CP007626.1|WP_018782661.1|3612133_3612967_-|LysR-family-transcriptional-regulator
MESHDLWIFKHVAELQSISRAAEKLGYVQPNISQRIKNLEDELGVKILKRNNRGVTLTEEGKVLLDYTNEIMLLMNEAKSKINPQKWRESLTIGASQTISAVKVPQLFSSFLASYKNMDVKIRTNDNAKLQEMLLYGELDGIFLSGTYNHSQLETVYSYYENIILISSKHNPLENQILLVNSDPNCIYRQQLLDYCNKNDFDQKTIMEFDSLESIMQAAHDGLGISIIPANVAYSRTKTKAIHYEELPETVKIDFVIRRRKQQPQSLKKFIRFLKEL
>NZ_CP007626.1|WP_018766603.1|3611156_3612032_+|LysR-family-transcriptional-regulator
MEIKELKTFKMIVQEGTFSLAAKKLNYAQSTVTTHIKKLENELGFLLFERGWDARLTEEGILFAEEVDNLLMHWNYSISQAQRISNEEKGTLRIGILESVAEKLIPPILKYLNDEKPYIHCDFVVGNTALLSQMIEQNKIDFAVCANNENISNLNFTPLSKEQIEFIVNNPNHPVLKKESVEISDIIHYPILIGENSCNYYKAVNSFLVENNVSFQRVYNCSAVHLIPQMVFGNAIGILPKGTVLKQSNISFKIKGFNPKVPIGLLISSKKRNYLSQTKQQLMKLIESLLL
>NZ_CP007626.1|WP_003195789.1|3610627_3611047_-|tautomerase-family-protein
MPFVTVYYPDGQLHREELKRVSNRIHYSLIEHFSIPENDYFHMFLPYPPNHFFYDPHYLLEEEKKRTDKMIHVSITCGPERTIQQKRNLYQSISEAFYDHLNISTTNIFITLNETSAENWSFGQGIAQMVTMKEKKNHE
>NZ_CP007626.1|WP_018766604.1|3610326_3610635_-|carboxymuconolactone-decarboxylase-family-protein
MNDRIELNISKKMRDTAPNFVDYSENVLFEKVWRDPALTPKERSFITLSALISIGNTEQLPFHLQLAEKNGMNQQEIIALITHLAFYAGWPKAAAALNVILR
>NZ_CP007626.1|WP_018782662.1|3608558_3609980_+|protoporphyrinogen-oxidase
MKKKVVIIGGGITGLTTAYYLQKEIREKGLPIDTLLIEASGKLGGKIQTVRKDGFTIERGPDSFLERKESAARLARELELGDELVNNATGQSFVLVNNRLHKMPSGSMMGIPTQVTPFLFSGLFSPIGKVRAGFDFVLPRSKPVSDQSLGQFFRRRLGNEVVENLIEPLLSGIYAGDIDQMSLMATFPQFYQVEQKYRSISLGMRTLAPKKIKDVKPKGIFLTLKTGLQSIVEKIEEQLEDGTVVKGTRIEKVAKMGDGYHITLSNGKEIEADSIVVAASHKVLPSMFAQYKEFRFFRNIPSTSVANVALAFPKEAIKRDIDGTGFVVSRNSDFSITACTWTHKKWPHTTPEGKVLLRCYVGRPGDEAIVEQTDEEIVQFILEDLQKTMDIKADPDFTVVSRWKDAMPQYTVGHKERMTKLKTFMDKELPGVYLAGSSYAGSGLPDCIDQGEAAVRHVLSYLEKIDEAELIAQ
>NZ_CP007626.1|WP_018782663.1|3607598_3608534_+|ferrochelatase
MKKKIGLLVMAYGTPYKEEDIERYYTHIRRGRKPSPEMLKDLTERYRAIGGISPLATITLEQAKKVEKRLNEMQDHVEFHMYLGLKHIEPFIEDAVKEMHNDGIEEAIALVLAPHYSTFSVKSYVGRAQEEADKLGNLTIHGIDSWYKEPKFIEYWVNEVKKIYDSMTEEEREKAVLIVSAHSLPEKIIALGDPYPEQLNETADYIARGAEVRNYAVGWQSAGNTPDPWIGPDVQDLTRELHEKYNYTSFVYAPVGFVAEHLEVLYDNDIECKIVTEEIGAKYYRPEMPNASDSFISCLADVVLKKQMDVS
>NZ_CP007626.1|WP_080740362.1|3621721_3621820_+|hypothetical-protein
MRREFIIHGFMDRNKSMYHVNAKEAWNKWGDL
>NZ_CP007626.1|WP_018782656.1|3621960_3622383_+|hypothetical-protein
MTTYFIVMLIILGGLKIIVTCLPSSVVKSLSSKFELHPKLSDAAVTVTIEGKQLEGKDKIQIIDQFNEAIFLEKYYFPPQSSGTPVVINTKKGKTDVRFSVYSYDDHVDVIKQYKKKVVGYSLRSKGLQNRSMLVTEDLA
>NZ_CP007626.1|WP_003195824.1|3622578_3623103_-|DinB-family-protein
MNPNAILEKFESVTMYYIKELEKYSLEQLRRKPSEDEWSLGQMYNHLLTASNMQLDAIAKCTTDSATIDGKKTEMGEKVYAMGAFPPVQIKIPDRPGYTPENPTDKEEIKQALLQIIEKMKGIEPQLPSILANYKVAHPGLGYLNAVEWFQLIYMHFSHHLHQKERLEQHIILK
>NZ_CP007626.1|WP_040119291.1|3623197_3624139_-|YafY-family-transcriptional-regulator
MNRTDRLLSILIELQRKQIVTANSLAEKFEICKRTIYRDMQALSESGVPIFSMPGQGYSLMDGYFLPPIQFKPEEAVTLLLGSDYVEQNLDSAFSTHAKSAKEKLEAILPSEQQKKVKELRGTFRFLSGTFSHQTFAQEQLEKQLLLLQESILKQQCVSFSYRKPNQSEQNKRTVNPYGLVNISGIWYIVAHCLLRQQIRHFRLDRMDNLQQEQTFFTKPENFYLPDYQPENNRTIIIHLLFPSHIAHKIIESRYFFIDSYEQKDDGFHVLLTSRSIDEVFPWVLSWGSQVKVLEPTILSEKLREEAKKMLQM
>NZ_CP007626.1|WP_016113707.1|3624335_3625349_+|LacI-family-DNA-binding-transcriptional-regulator
MSTIEDVAKLAGLSRTTVSRVINNHPYVSDEKKKRVQLAMKHLGFVPNSAARRLRKQKTETIAVLVPRITNPFFSRFIEAIEIAASEHKYKLIICQTRYLPEKEMEYLQLLSTKQVDGIILCSLENPWENVEPYLQHGPIVLCNEYIEEANIPTVKFDHAQGAYIAAKHVLEQDYRNLIFCRGNETKVVSQQRKMGFLRAITEKSKEVEAIDFLENAFSWEDGKRIFHEVLKDKKNPTAILAGGDEVAAGIIAEAKRHGWSIPDDLAVVGFDNQILSQITEPGITTIEQPIDEMAHKVVDLMMDKIHTKNYRKKELYEFELELLVKGSTMKNTMLLA
>NZ_CP007626.1|WP_000567010.1|3625389_3625518_-|YhfH-family-protein
MIDQPMEFFRNLPTKTCAHCGKEIDEQHEAYHNKCDDCVHEE
>NZ_CP007626.1|WP_006093885.1|3625718_3626453_+|MBL-fold-metallo-hydrolase
MKMTVVGFWGGFPEVGEATSGYLFEHDGFRLLVDCGSGVLAQIQKYITPSDIDAVLLSHYHHDHVADIGVLQYARLITSMAKGQLPELPIYGHGFDVQGFSSLTHAPHTKGIVYNPEETLQIGPFSISFLKTVHPVICYAMRITVGDKVIVYSADSSYIPEFIPFTKDADLFICECNMYAHQEAAKAGHMNSTEVADIAKNANVKELLLTHLPHTGNISDLVEEAKQIFDGRITLAHSGYVWNS
>NZ_CP007626.1|WP_040119292.1|3626464_3627454_+|lipoate--protein-ligase
MLFIDNKGITDPTINLAIEEYCVKNLDINETYLLFYINEPSIIIGKNQNTVEEINADYVKEKGIHVVRRLSGGGAVYHDLGNLNFSFIRKDDGDSFHNFKKFTEPVTKALGKLGVNAELSGRNDILAEGRKISGNAQFSTKGRMFSHGTLLFDSEIDHVVSALKVKMDKIQSKGIKSIRSRVANITEFLNEKMTTEEFKQLLLATIFEGETEIPTYELTEEDWKEIYKISEERYRNWDWNYGKSPKFNLQHSHRFPVGQVDVRLEVTKGTVTECKVYGDFFGVEDVHDIEECLTGVQFDKEAFAAALEDVDVKRYFGNITKEDFLALFF
>NZ_CP007626.1|WP_018782654.1|3627664_3629197_+|fatty-acid--CoA-ligase-family-protein
MNLVQSLAETAKQKGEKPAYIFMDQSVSYDQLNKMVTQFSSNLAKMGIGKGDNVALVVGNSPHFLIGLYGTMKAGATVVPINPIYTADEMHYILQNGDVKTIITLDVLLPVIQSLTTRLPSLEHIIICETSADFNHTETEKMKTFTSLIGTGDLSYEGPELNEEDVAVILYTSGTTGKPKGAMLTHKNLYSNASDVASYLQYTADDRVVAALPMFHVFCLTVAVNAPIVNGATILMLPKFSPKEVFRICRMYEPTIFAGVPTMYNYLYLYEEASADDVQTLRLCISGGASMPVALLKNFENRFNVIVSEGYGLSEASPVTCFNPLDRPRKPGSIGTNIWHVENKIVNELGEEVSVGEVGELIVRGPNVMKGYYNAPEDTAAVLRDGWLYTGDLARMDDEGYFYIVDRKKDIVLVGGYNVYPREVEEVLYQHEAVAEVVAIGVPDENLGEAVRAYVVLKNGAVTEEELTHYCSLHLAKYKVPKSIEFLEELPKNTTGKLLRRALREKAVQA
>NZ_CP007626.1|WP_018782653.1|3629281_3629809_-|isochorismatase-family-protein
MKQALVIIDMQEIFFNYPQNYLFNNEQLVTNINELIKQAHEKNVQVIFIQHTSQNEQDELFEGKDDWKLHKNLFVSPTDKIIQKSKWDSFYQTELLDYLKTNEIEQLIFAGAQTEFCLDTTIRAAFSLGYQKNLLFKETHSTIDGAILDAGDIINHHQSIWNNRFLTVIDGKIKL

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Crispr_ID: NZ_CP007626_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_7

3675371-3675454

Orphan

Consensus_repeat	Method
GATGGCCCGATGAAAACAGGCTGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007626_7

>merge|NZ_CP007626|7|3675371-3675454|CRISPRCasFinder
GATGGCCCGATGAAAACAGGCTGGGTGCAAGATGAGGGTACATGGTACTATCTGAATGCGGATGGCCCGATGAAAACAGGATGG

>NZ_CP007626|7|6|3675371-3675454|CRISPRCasFinder
GATGGCCCGATGAAAACAGGCTGG	GTGCAAGATGAGGGTACATGGTACTATCTGAATGCG
GATGGCCCGATGAAAACAGGATGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_018783040.1\|3687226_3688081_-\|peptidylprolyl-isomerase-PrsA	unknown	unknown	gnl\|CDD\|101162
NZ_CP007626.1\|WP_029427737.1\|3683221_3684562_-\|Cys-Gln-thioester-bond-forming-surface-protein	unknown	unknown	gnl\|CDD\|369823
NZ_CP007626.1\|WP_003195875.1\|3669483_3670674_-\|ornithine-aminotransferase	unknown	unknown	gnl\|CDD\|179736
NZ_CP007626.1\|WP_018783043.1\|3679786_3681049_-\|ammonium-transporter	unknown	unknown	gnl\|CDD\|223083
NZ_CP007626.1\|WP_006093931.1\|3678107_3679574_+\|catalase	unknown	unknown	gnl\|CDD\|163710
NZ_CP007626.1\|WP_018783045.1\|3675813_3676611_-\|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|213747
NZ_CP007626.1\|WP_003195889.1\|3685403_3685895_-\|YajQ-family-cyclic-di-GMP-binding-protein	unknown	unknown	gnl\|CDD\|213038
NZ_CP007626.1\|WP_040119300.1\|3672163_3674017_+\|asparagine-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|273676
NZ_CP007626.1\|WP_033794635.1\|3670835_3671195_+\|YisL-family-protein	unknown	unknown	gnl\|CDD\|237465
NZ_CP007626.1\|WP_018783042.1\|3681296_3682568_+\|alpha-amylase	unknown	unknown	gnl\|CDD\|200478
NZ_CP007626.1\|WP_018783051.1\|3667653_3667833_-\|aspartyl-phosphate-phosphatase-Spo0E-family-protein	unknown	unknown	gnl\|CDD\|378175
NZ_CP007626.1\|WP_001120851.1\|3688204_3688336_-\|DUF3941-domain-containing-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_006093927.1\|3686037_3686904_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225543
NZ_CP007626.1\|WP_018783044.1\|3677090_3678050_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|183526
NZ_CP007626.1\|WP_029427741.1\|3668942_3669449_+\|HXXEE-domain-containing-protein	unknown	unknown	gnl\|CDD\|379370
NZ_CP007626.1\|WP_006093914.1\|3666390_3667005_-\|germination-protein-GerPC	unknown	unknown	gnl\|CDD\|371215
NZ_CP007626.1\|WP_006093916.1\|3667296_3667518_-\|spore-germination-protein	unknown	unknown	gnl\|CDD\|371190
NZ_CP007626.1\|WP_003195877.1\|3671336_3671891_-\|DUF2777-domain-containing-protein	unknown	unknown	gnl\|CDD\|371311
NZ_CP007626.1\|WP_018783050.1\|3668074_3668974_+\|fumarylacetoacetate-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|223257
NZ_CP007626.1\|WP_006093915.1\|3667088_3667280_-\|germination-protein-GerPB	unknown	unknown	gnl\|CDD\|313906

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_018783040.1\|3687226_3688081_-\|peptidylprolyl-isomerase-PrsA	gnl\|CDD\|101162	PRK03002, prsA, peptidylprolyl isomerase PrsA.	8.91851e-146
NZ_CP007626.1\|WP_029427737.1\|3683221_3684562_-\|Cys-Gln-thioester-bond-forming-surface-protein	gnl\|CDD\|369823	pfam08341, TED, Thioester domain. This domain is found near the N-terminus of a variety of bacterial surface proteins and pili. This domain contains an unusual covalent ester bond between a conserved cysteine and glutamine residue.	3.33463e-15
NZ_CP007626.1\|WP_003195875.1\|3669483_3670674_-\|ornithine-aminotransferase	gnl\|CDD\|179736	PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.	0
NZ_CP007626.1\|WP_018783043.1\|3679786_3681049_-\|ammonium-transporter	gnl\|CDD\|223083	COG0004, AmtB, Ammonia permease [Inorganic ion transport and metabolism].	0
NZ_CP007626.1\|WP_006093931.1\|3678107_3679574_+\|catalase	gnl\|CDD\|163710	cd08154, catalase_clade_1, Clade 1 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 1 catalases are found in bacteria, algae, and plants; they have a relatively small subunit size of 55 to 69 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. They appear to form tetramers. In eukaryotic cells, catalases are located in peroxisomes.	0
NZ_CP007626.1\|WP_018783045.1\|3675813_3676611_-\|LysM-peptidoglycan-binding-domain-containing-protein	gnl\|CDD\|213747	TIGR02869, Spore_cortex-lytic_enzyme, spore cortex-lytic enzyme. Members of this protein family are the spore cortex-lytic enzyme SleB from Bacillus subtilis and other Gram-positive, endospore-forming bacterial species. This protein is stored in an inactive form in the spore and activated during germination. [Cellular processes, Sporulation and germination].	5.06481e-42
NZ_CP007626.1\|WP_003195889.1\|3685403_3685895_-\|YajQ-family-cyclic-di-GMP-binding-protein	gnl\|CDD\|213038	cd11740, YajQ_like, Proteins similar to Escherichia coli YajQ. In Pseudomonas syringae, YajQ functions as a host protein involved in the temporal control of bacteriophage Phi6 gene transcription. It has been shown to bind to the phage's major structural core protein P1, most likely activating transcription by acting indirectly on the RNA polymerase. YajQ may remain bound to the phage particles throughout the infection period. Earlier, YajQ was characterized as a putative nucleic acid-binding protein based on the similarity of its (ferredoxin-like) three-dimensional topology with that of RNP-like RNA-binding domains.	2.61153e-85
NZ_CP007626.1\|WP_040119300.1\|3672163_3674017_+\|asparagine-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|273676	TIGR01536, Asparagine_synthetase_1, asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff. [Amino acid biosynthesis, Aspartate family].	4.83099e-180
NZ_CP007626.1\|WP_033794635.1\|3670835_3671195_+\|YisL-family-protein	gnl\|CDD\|237465	PRK13673, PRK13673, hypothetical protein; Provisional.	1.90526e-35
NZ_CP007626.1\|WP_018783042.1\|3681296_3682568_+\|alpha-amylase	gnl\|CDD\|200478	cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). This group of CMDs is bacterial. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	1.31654e-65
NZ_CP007626.1\|WP_018783051.1\|3667653_3667833_-\|aspartyl-phosphate-phosphatase-Spo0E-family-protein	gnl\|CDD\|378175	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein. Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure.	6.0516e-11
NZ_CP007626.1\|WP_006093927.1\|3686037_3686904_+\|hypothetical-protein	gnl\|CDD\|225543	COG2996, COG2996, Predicted RNA-bindining protein (contains S1 and HTH domains) [General function prediction only].	4.28855e-113
NZ_CP007626.1\|WP_018783044.1\|3677090_3678050_+\|ferrochelatase	gnl\|CDD\|183526	PRK12435, PRK12435, ferrochelatase; Provisional.	0
NZ_CP007626.1\|WP_029427741.1\|3668942_3669449_+\|HXXEE-domain-containing-protein	gnl\|CDD\|379370	pfam13787, HXXEE, Protein of unknown function with HXXEE motif. This domain contains an HXXEE motif, another conserved histidine and a YXPG motif. Its function is unknown.	3.89766e-10
NZ_CP007626.1\|WP_006093914.1\|3666390_3667005_-\|germination-protein-GerPC	gnl\|CDD\|371215	pfam10737, GerPC, Spore germination protein GerPC. GerPC is required for the formation of functionally normal spores. The gerP locus encodes a number of proteins which are thought to be involved in the establishment of normal spore coat structure and/or permeability, which allows the access of germinants to their receptor.	1.10282e-59
NZ_CP007626.1\|WP_006093916.1\|3667296_3667518_-\|spore-germination-protein	gnl\|CDD\|371190	pfam10676, gerPA, Spore germination protein gerPA/gerPF. This is a bacterial family of proteins that are required for the formation of functionally normal spores. Proteins in this family may be involved in establishing normal coat structure and/or permeability which could control the access of germinants to their receptor.	2.29994e-21
NZ_CP007626.1\|WP_003195877.1\|3671336_3671891_-\|DUF2777-domain-containing-protein	gnl\|CDD\|371311	pfam10949, DUF2777, Protein of unknown function (DUF2777). This family of proteins with unknown function appears to be restricted to Bacillus cereus.	4.81185e-76
NZ_CP007626.1\|WP_018783050.1\|3668074_3668974_+\|fumarylacetoacetate-hydrolase-family-protein	gnl\|CDD\|223257	COG0179, MhpD, 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis, transport, and catabolism].	4.45214e-99
NZ_CP007626.1\|WP_006093915.1\|3667088_3667280_-\|germination-protein-GerPB	gnl\|CDD\|313906	pfam10803, GerPB, Spore germination GerPB. Members of this family are required for formation of functionally normal spores. They may be involved in the establishment of spore coat structure or permeability.	8.07174e-19

>NZ_CP007626.1|WP_040119300.1|3672163_3674017_+|asparagine-synthase-(glutamine-hydrolyzing)
MCGITGWIDYKRSLEGERETVTKMAETLAKRGPDDTNVWIKRHVAFGHKRLIVVDPEGGKQPMTCTCMKEEEYYTICYNGELYNTEDIRKELMQRGYRFKGHSDTEVLLASYIEWKEECVNHLNGIYAFVVWDEKKEQVFIARDRLGVKPLFYKYENGRLLFASELKAILAHPDVKTEVTTEGLSEIFGLGPSRTPGHGIYAGIQELRPGHVLTFSKDGLCIWRYWNVESKKHEHSFEETVEQVRFLLKDAITRQLVSDVPLCTFLSGGVDSSAITAFAAMAYEREGKGKLHTYSIDYEDNEKYFKANAFQPNSDAPFIDLMTETFGTIHHRCVISNEQLAEYLTEAVLVRDLPGMADIDSSLLWFCREIKQDFVVGLSGECADEIFGGYPWFYREDDLQSSAFPWMRSTEAREQLLKKEWRDKLKLQEYVQRRYEESIQEVPILEGESTIEAKRRQLFYLNMVWFMTTLLDRKDRMSMGASLEVRVPFADHRLVEYAWNIPWEIKMYKNREKGLLRKVLEGVLPNDILYRKKSPYPKTHNPHYTEAVTVWLQNLLTDKNSILHELFDKEQLQGLIQSGGSAFQTPWFGQLMTGPQLLAHLAQIHVWFKEYGVNIKE
>NZ_CP007626.1|WP_003195877.1|3671336_3671891_-|DUF2777-domain-containing-protein
MKQRKHILYNQPRAHTIGNVEYINNEWIFFDDENDEAFLLEDIIEDGFEVLYNNNWLPARFYEQNILQIANEHHPLQNGEMIRIRKKLLLSYHEWLEELSDSAFALFAETLQSFNYSLYDCIYCHNFLSFQPKEGPCEGVNLLLFDNEEMICSLHHHYVRYSTCNKNIFQFTKTNGEQLHIEST
>NZ_CP007626.1|WP_033794635.1|3670835_3671195_+|YisL-family-protein
MHITAWALGLILFFVAYSMYTAGRKGKGVHMGLRLVYIIIIVTGFLLYQSIMKTATGNMHMWYGLKMLVGVWVIAAMEMILVKTSKKKPAGAFWVQFIIALVIVLYLGLRLPMGFSPFA
>NZ_CP007626.1|WP_003195875.1|3669483_3670674_-|ornithine-aminotransferase
MIQTKDIIELTDTYGAHNYHPLPIVISKAEGVWVEDPEGNRYMDLLSAYSAVNQGHRHPKIIDALIEQANRVTLTSRAFHSDQLGPWYEKVAELTNKNMVLPMNTGAEAVETAIKTARRWAYDVKKVEENRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEAYDVCKKENVLFVADEIQTGLGRTGKLFACDWDNIIPDMYILGKALGGGVFPISCVAANRDILGVFEPGSHGSTFGGNPLACAVSIAALDVLLDEKLTERSLQLGEKLVGQLKEIDNPMITEIRGKGLFIGIELNEPARPYCEKLKEAGLLCKETHENVIRIAPPLVISEEDLEWAFQKIKAVLS
>NZ_CP007626.1|WP_029427741.1|3668942_3669449_+|HXXEE-domain-containing-protein
MLERFKTWSNSTLYIWLIPILFAFHNAEEYYFFPEMKYFQPIRMEENAWQKQYFFIALCLLTSIVFLLVCIHSIFKKKVTLYILLVIQAMIFMNGLFHITGAILTERYVPGLVTAVIFIIPFSLFWFRKGIRNDWWELKHVIVSCIAGVLLLFPVIVGILLFSKMIVS
>NZ_CP007626.1|WP_018783050.1|3668074_3668974_+|fumarylacetoacetate-hydrolase-family-protein
MRFVTVKKEEKVFVGIVDEYEEKVLHIREAQRQKGEKITVPITMLECIEKGNAFIEKVVEIINWAKENETTAYYPLQDVKILAPIPRPRKNILCVGKNYRDHAIEMGGEESIPKDIMIFTKAPTTVIGNREKIHSHPHATSELDYEGELAIVIGKRGKQIAKDKALEYVFGYTIVNDITARDIQRKHKQFFLGKSFDTFCPMGPYLVHKTAIKTPNQLDIETRVNGEVRQTSNTANMIFSIEDIISIVSKGMTLEPGDIIATGTPAGVGKGFIPPKFLSAGDEVTITVQHVGTLQNLVK
>NZ_CP007626.1|WP_018783051.1|3667653_3667833_-|aspartyl-phosphate-phosphatase-Spo0E-family-protein
MFEQAIEKKREKMMYFAERYGITSQKTVNCSQELDRLLNVVWLLKADFTSTYTIDEHTQ
>NZ_CP007626.1|WP_006093916.1|3667296_3667518_-|spore-germination-protein
MPAMVGHIHIVNIGSSGIFHVGDVFAIRPISYSRAFAGAGSFNVGENISVYNYQNATTVNDTDIIDQAIIGSN
>NZ_CP007626.1|WP_006093915.1|3667088_3667280_-|germination-protein-GerPB
MNFYVQQSIIINNIRIDSITTSSVFQIGSAGSIKALSKFSNTGGFTAPLRPLKSKGQIISIKP
>NZ_CP007626.1|WP_006093914.1|3666390_3667005_-|germination-protein-GerPC
MNQDVYIYLQQFQQVLQKQQEAIHALEEQVQTLRKELDELKGRPSSSIGKVEYKFDQLKVENLNGTLNIGLNPFATKGQQIEDFEVDTETLKVNPETQTNPDFYQGIIQEMHRYLDEEAYSRILHFEQEQRTPLDDMYRQMMIDDIKKQMEHRLPYYLSQVQPYEEITSDPQYMKDAIIQAMKQDIDKAFLSFIQHIPNNFRKE
>NZ_CP007626.1|WP_018783045.1|3675813_3676611_-|LysM-peptidoglycan-binding-domain-containing-protein
MKLHKMKHLLPISAATITLVSNQGTADAATVYTVKKNDTLGGISIHYGVSVQAIKQANHKTNDRIYIGEQLTIPVSPSSSESTQQKDVEASNHSTQIVYQVQRGDTLEAIAKRYNVSIQSIRQANNTNGDRIYAGQHLIITTGISEQELDLMARLVTAEAGGEPYAGKVAVAKVILNRVDAVGFPNTITDVIYEPIKYGYAFTPVTDGRIDQPATREARMAVEEAISTKGINSDWLYFYNPKTSTDKWITTRQTVAVIGNHVFAK
>NZ_CP007626.1|WP_018783044.1|3677090_3678050_+|ferrochelatase
MNKKKIGLLVMAYGTPESLEDVAAYYTHIRHGRKPSQEALDDLVGRYKAIGGISPLAKITKEQARKLTNELNKSFSEFEFVCYLGLKHIAPFIEDAVEEMKRDGIEEAISIVLAPHYSTFSIKAYNERAEKISENINGPVIEPIEQWYDEPKFIAYWANRIKETFTRITDGEKAVVIFSAHSLPEKIITAGDPYVKQLQHTADLIAEAAGIQNYTIGWQSAGNTPDPWIGPDVQDVTKDLYEKHGYESFVYCPVGFVAEHLEVLYDNDYECKVVTDELGASYFRPAMPNAQDLFIDCLVEIVSKKVNKIIDKKLILNNN
>NZ_CP007626.1|WP_006093931.1|3678107_3679574_+|catalase
MNPNNRLTTNQGAPVGDNQNSRTAGRRGPVLLEDYHLVEKLAHFDRERIPERVVHARGAGAHGVFVTKNSMKAYTKAAFLQNEGTETPVFVRFSTVIHGQGSPETARDPRGFAVKFYTEEGNYDIVGNHLPVFFIRDAIKFPDMVHSLKPAPDTNIQTPDRYWDFMTLSPESTHMMTWVFSDYGTPANYRQMEGFGVHSFKWISAEGKIVYIKYHWKPQQGVRNLSAKEVEQVQGKDFNHATRDLFDAIERGDYPKWDLHVQVMQLDEMDSLDFDPLDPTKVWPEDRFPLIEVGTMTLNRNPQNFFAEVEQAAFTPSATVPGIEPSEDKLLQGRLFSYPDTQRYRLGANYLQIPVNCPYAAVRNQQRDGAMQMNQQPSTINYEPSRHAENPVEDPAYRDSTMKLEGYVSREKIDKPNDFQQAGERYRSFSKKEQDNLIANLTNDLKDVHEQTKLLAICNFFRADRDYGMRLAKSLNVDISAYVGNPKK
>NZ_CP007626.1|WP_018783043.1|3679786_3681049_-|ammonium-transporter
MNMGDTVFLFLATVMVMIMTPGLALFYGGMVRSKNVLSTTMHSYSAMAIVSIQWIFIGYSLSFGPDWNGVIGTLDWFGLQNVTYAPNADYSATIPHNLFMMFQLMFAILTPALISGAFAERMRFSAFLIFILIWTTIVYNPVAHWVWGVGGWLRELGALDFAGGNVVHITSGVAGLVLAIFLGKRKDVNGSSPHHLPFTLLGAGLLWFGWFGFNVGSALTLNDVALTAFINTNTAAAASALTWILAEWFFQSKPTVMGAACGAVSGLVAITPACGFVTPFSALLIGAIGGVLCFGAVFFLKHKLGYDDALDAFGCHGIGGTWGGIATGLFATTSVNSGGADGLFYGNAALLWKQLAAIGATYAFTIVMTYAIIKGISFFLPVRAHEHEEQMGLDISMHGEKAYEYSEKSLGEVAIQKEAK
>NZ_CP007626.1|WP_018783042.1|3681296_3682568_+|alpha-amylase
MVFAFLAPIHTLAEEKREWQDEVVYSIMVDRFNNGDAKNDKQLDVGNLERYQGGDIQGIVKRIDYIKEMGFTTIMLSPIFKGETYDGYGMVDLQKVNEHFGSMQDVKQLVQEAHKRDMKVVFQFVVEKEQETLIDSIKWWMKEANIDGSYLMHSKEISRAFLNTVKQSVQGIKKDFLVMTDEGEGIHNEYYKHITDVFTKTDTPIKPLYDVSLIENGKVTSNFLDNQDTKRFVRIAKEKAYYPPARLKLALTYLYTTPGMPIVYYGTEIALDGGGVPDNRRLMDFKTDEKFLQYVTRLGEIRQKFPSLRRGTFELVYDKTGMSVLKRTYKDEVTLVAINNTKETQKVSLSANEIGENRELKGLLEDEIIREEDGNYYLVLKREEANVYQVREKTGVNWLFISLLIGVNVLFIAFLIAVKKKKK
>NZ_CP007626.1|WP_029427737.1|3683221_3684562_-|Cys-Gln-thioester-bond-forming-surface-protein
MKRKVLTKWFGIISLIIMLLGVSIPQAAAEIIHQEKFQINWNHIKFKGAEVKIKADLLKTSSKDVAYCLSPDLNSPNGEELPEIGKENDFVYRVLLYGYPQKTPAELGVSTKEEAYYATQLAIWVASKKIEIADSKPENQPVYNLVKQLIDKASKGTEVQETYLNIIPNEKQTVEQNGDYLETKLYTVQSNALSGVYSVQLEEAPEGVKILNEQGEEKNEFSIKEKFKILIPKKSTNGTFKLRVHTKLQSLQAVVFDGKQKVQNTTALLPRMSEKSSTDIAVQWESLGSLKITKVGENRETLKGAVFEVASENGDFRKEITTTKDGVALLNQLPIGTYIIKEIQAPEGYVLDPTIQRMEVKNGEIAKIEIKNKKIKNELQVTKIHDTYKNTKQSDDIQNKEYTEEKEHVSQEQYYLPSTGGKFPITSYIGISFVVLGLYILKVKHK
>NZ_CP007626.1|WP_003195889.1|3685403_3685895_-|YajQ-family-cyclic-di-GMP-binding-protein
MAKDSSFDIVSKVELPEVTNAINIALKEIQNRYDFKGSKSDIKLEKEVIVLTSDDEFKLDQVKDVLISKLVKREVPIKNLDYGKVESATGNTVRQRATLQQGIDKDNAKKINNIIKELKLKVKTQVQDDQVRVTAKSRDDLQAVIAAVRSADLPIDVQFINYR
>NZ_CP007626.1|WP_006093927.1|3686037_3686904_+|hypothetical-protein
MYLQPGSIEQVTVLRETEIGYMVGFDDEDGYEEVFLHKNEVAGEIEEGDTIDVFLYLDHQERISATMKTPLITISDWNWVKVVEVKPDLGVFVDIGVSKDILIPADEFPIYTPVWPEEGDELYCTLKLTNRGRLIALPARDSDMQEIIVEATPSMRNKNVNGRVYRSLQVGSFVLTDEHFRAFLHHTERKEQVRIGERVTGRIIDVKDDGTINISLLPRKEEGMEDDAAVVYEYMESRGGAMPFWDKSHPEDIKERFNMSKAAFKRALGKLMKEEKVYQEEGWTYFKK
>NZ_CP007626.1|WP_018783040.1|3687226_3688081_-|peptidylprolyl-isomerase-PrsA
MQRKQLWIATAALGTLMLSACGPKDNSEAIATSKVSTITKGDFDKQLKERYGKDMLYEMMAQDIMTKKYKVSDDEVDKEFKKAKDQFGDQFKTVLESNRLKDEDDFKNQIRFKLAMNEAIKKSITDKDVKANYKPEIKASHILVNDEKTANDIKKQLDEGASFEELAKQQSQDPGSKENGGDLGYFGPGKMVPEFEEAAYKLNVGEISKPIKSSQGYHIIKLTDKKELKPYDEVKDSIRKNLEEKLLADQTTGQKILLDEFKKADIKVKDSDLKDTFSRLSGQQ
>NZ_CP007626.1|WP_001120851.1|3688204_3688336_-|DUF3941-domain-containing-protein
MPHTSDNDKKARDNNAKRTQKNEQEQKNIQQGKRAYSKKTDHL

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Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007626_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_9

5130001-5130107

Orphan

Consensus_repeat	Method
CCTTCTGCATGGGCAACTTCTCCACT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007626_9

>merge|NZ_CP007626|9|5130001-5130107|CRISPRCasFinder
CCTTCTGCATGGGCAACTTCTCCACTGGCGGTATTTATTCCTTCCGCATGGGAAGCAATTCCACTGGCAGTGGTAAAGCTCCCTTCTGCATGGGCAGCTTCTCCACT

>NZ_CP007626|9|8|5130001-5130107|CRISPRCasFinder
CCTTCTGCATGGGCAACTTCTCCACT	GGCGGTATTTATTCCTTCCGCATGGGAAGCAATTCCACTGGCAGTGGTAAAGCTC
CCTTCTGCATGGGCAGCTTCTCCACT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_018780617.1\|5127453_5129457_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP007626.1\|WP_006097101.1\|5125614_5125962_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP007626.1\|WP_040119596.1\|5137263_5138583_-\|HBL/NHE-enterotoxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP007626.1\|WP_018780624.1\|5140223_5141294_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|376220
NZ_CP007626.1\|WP_003210117.1\|5133399_5134527_-\|alpha-helical-pore-forming-toxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP007626.1\|WP_078211891.1\|5123692_5123890_-\|choloylglycine-hydrolase	unknown	unknown	gnl\|CDD\|367486
NZ_CP007626.1\|WP_018780621.1\|5134808_5135936_-\|alpha-helical-pore-forming-toxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP007626.1\|WP_018780613.1\|5121516_5122506_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226119
NZ_CP007626.1\|WP_018780626.1\|5143884_5145981_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226482
NZ_CP007626.1\|WP_018780615.1\|5124737_5125151_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|136040
NZ_CP007626.1\|WP_018780612.1\|5120047_5120761_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_CP007626.1\|WP_006097103.1\|5126976_5127189_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_003203567.1\|5130842_5131208_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_080740380.1\|5126259_5126775_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018780625.1\|5141498_5143202_-\|M4-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341060
NZ_CP007626.1\|WP_006095027.1\|5119161_5119500_-\|DUF952-domain-containing-protein	unknown	unknown	gnl\|CDD\|377607
NZ_CP007626.1\|WP_018765647.1\|5135972_5137193_-\|HBL/NHE-enterotoxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP007626.1\|WP_003204648.1\|5123107_5123554_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP007626.1\|WP_018780627.1\|5146319_5147306_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366009
NZ_CP007626.1\|WP_018780620.1\|5132169_5132559_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_018780617.1\|5127453_5129457_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.50738e-57
NZ_CP007626.1\|WP_006097101.1\|5125614_5125962_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	3.21661e-09
NZ_CP007626.1\|WP_018780624.1\|5140223_5141294_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|376220	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal. Rap proteins consist of a N-terminal 3-helix bundle and a tetratricopeptide domain. This entry represents the conserved region of the C-terminal bundle.	8.87341e-20
NZ_CP007626.1\|WP_078211891.1\|5123692_5123890_-\|choloylglycine-hydrolase	gnl\|CDD\|367486	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.	7.59464e-07
NZ_CP007626.1\|WP_003204648.1\|5123107_5123554_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.32209e-10
NZ_CP007626.1\|WP_018780621.1\|5134808_5135936_-\|alpha-helical-pore-forming-toxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	1.89283e-59
NZ_CP007626.1\|WP_018780613.1\|5121516_5122506_-\|hypothetical-protein	gnl\|CDD\|226119	COG3591, COG3591, V8-like Glu-specific endopeptidase [Amino acid transport and metabolism].	0.000440697
NZ_CP007626.1\|WP_018780626.1\|5143884_5145981_-\|AAA-family-ATPase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	1.78542e-134
NZ_CP007626.1\|WP_018780615.1\|5124737_5125151_+\|hypothetical-protein	gnl\|CDD\|136040	PRK06763, PRK06763, F0F1 ATP synthase subunit alpha; Validated.	5.21427e-11
NZ_CP007626.1\|WP_018780612.1\|5120047_5120761_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.75683e-29
NZ_CP007626.1\|WP_018780627.1\|5146319_5147306_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|366009	pfam00296, Bac_luciferase, Luciferase-like monooxygenase.	1.2676e-66
NZ_CP007626.1\|WP_018780625.1\|5141498_5143202_-\|M4-family-metallopeptidase	gnl\|CDD\|341060	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease. This peptidase M4 family includes several endopeptidases such as thermolysin (EC 3.4.24.27), aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, protealysin, and bacillolysin (EC 3.4.24.28). Typically, the M4 peptidases consist of a presequence (signal sequence), a propeptide sequence, and a peptidase unit. The presequence is cleaved off during export while the propeptide has inhibitory and chaperone functions and facilitates folding. The propeptide remains attached until the peptidase is secreted and can be safely activated. All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The active site is found between two sub-domains; the N-terminal domain contains the HEXXH zinc-binding motif while the helical C-terminal domain, which is unique for the family, carries the third zinc ligand. These peptidases are secreted eubacterial endopeptidases from Gram-positive or Gram-negative sources that degrade extracellular proteins and peptides for bacterial nutrition. They are selectively inhibited by Steptomyces metalloproteinase inhibitor (SMPI) as well as by phosphoramidon from Streptomyces tanashiensis. A large number of these enzymes are implicated as key factors in the pathogenesis of various diseases, including gastritis, peptic ulcer, gastric carcinoma, cholera and several types of bacterial infections, and are therefore important drug targets. Some enzymes of the family can function at extremes of temperatures, while some function in organic solvents, thus rendering them novel targets for biotechnological applications. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing. It has also been used in production of the artificial sweetener aspartame.	1.69096e-97
NZ_CP007626.1\|WP_006095027.1\|5119161_5119500_-\|DUF952-domain-containing-protein	gnl\|CDD\|377607	pfam06108, DUF952, Protein of unknown function (DUF952). This family consists of several hypothetical bacterial and plant proteins of unknown function.	3.82239e-29
NZ_CP007626.1\|WP_018765647.1\|5135972_5137193_-\|HBL/NHE-enterotoxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	3.87798e-49
NZ_CP007626.1\|WP_003210117.1\|5133399_5134527_-\|alpha-helical-pore-forming-toxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	1.72895e-54
NZ_CP007626.1\|WP_040119596.1\|5137263_5138583_-\|HBL/NHE-enterotoxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	2.39125e-40

>NZ_CP007626.1|WP_018780617.1|5127453_5129457_-|serine-hydrolase
MERRSHRIIHHFRSLLVISLCFFLVFLGGNNSKAETVSSIALNAIDVEAFTNKVIPEKMKAENAPGVAIVVVKDDQILFQKGYGFSNKEQNIPIDPKKTVFRLASVSKVFTASAVMQLVEQGKIDLNKDIVNYMGGLKYQNNVGEPVTMKHLLTHTTGFDDVDPRLGDIHDQINDYTKLKDYVEENMPTVVRKPGDTYTYDNFASMLQGYIVQNLTDTPFYKYMAKNIFYPLEMQNSSFVMTNFIKDKLATGYDKKGDVIPFYQTRPTDMPQGSMFSTGSDVANFMIAQLNGGKFKNKQILKTETVQDMQQTKFALHPKYPNMTYGFEFFSPQSHNGQYVFGKGGNIPGFSSLMWLIPEHKLGVFVVTNKDSSLLPYKLFDEFMNHYFPDKTKPEYLKPSEEELKKFEGVYRDLRVKNLITHVKISEGKLFVADKRYGKQELKQIDPLLFEDEKGNYMAFKLHKDGTVKEMIHWNSGSSAVKVSEPKRFQDVEVNHPYAKFIDPLHQYDILKANKEGSFVPEAPLTRGEFSYWLSQIAYFAPPSKKDPVFSDVKGHQYASHIQKLYELGILYEKEGEHFYPDRAITRQEAAWIAWHYLEMLEAPPAEATLKGQTDDWAIESVKNIVGHHLVGPEVIYNEDGSADYLSKQIMKRQEAAALLLFVMLGS
>NZ_CP007626.1|WP_006097103.1|5126976_5127189_-|hypothetical-protein
MLKKLVVGVLATGILLTRAGGALAAEEFPYQVKTKGFNGQPVSIGFDNKTDLEDYLKKHPVPHCHKAKFL
>NZ_CP007626.1|WP_080740380.1|5126259_5126775_-|hypothetical-protein
MGVLSTGLLAGAMLFGVSSPQAYADSPAKPYQVITDGFDGEQTTIGFENKTDFENYLESHPVPKSNKVQPLASIYSTFYYDNDLKGSRFTVNASRNPVVVVNFSGSNNDNVSSILTHPYGDYTTIYEHVNAEGRALAIVNNGKYINLTDVSMGDGARTWNDEVSSAIVKSN
>NZ_CP007626.1|WP_006097101.1|5125614_5125962_+|YkgJ-family-cysteine-cluster-protein
MEGLPCNGCKGMCCGPVPITEEEFKKIKKKIKSMPTKKRLDLKSQQRYFGTCIFYDEINDRCGIHPVRPIICRAFGYYNNLVCFRKPEVVSAKNYMSNEQPIGILSVDFTWKDFS
>NZ_CP007626.1|WP_018780615.1|5124737_5125151_+|hypothetical-protein
MKKAILAGALGVAVLSGMNLPGLEVPKASAATMDLEIQEVTKYYSLSSYEVSQKESFNLKKGEELTVFVNNSGFPISYTVFDADNQVIGTYNANSPYGRVFKAQKDGNISVQFQAGVNSSFMKKMNFTAKFALSKFN
>NZ_CP007626.1|WP_078211891.1|5123692_5123890_-|choloylglycine-hydrolase
MREPVVTGLQFMVVVRAILETCKNIEEAVYAVKNMPVGTNMNLLLADANGEATLVGTYDGVKYII
>NZ_CP007626.1|WP_003204648.1|5123107_5123554_-|GNAT-family-N-acetyltransferase
MNKLSLKPIDKSNWEEAIKLSVKEEQRTFIASNLYSIAEVQFLDNFYANGIYLDNKLIGFAMFGIDSDDNNYWIYRLMIDKEYQGQGIGIQAIFLIIEKIRSINNKNIPLIMIGYNPKNLSAKIAYRKAGFVETEVSSWGEQLAKFTL
>NZ_CP007626.1|WP_018780613.1|5121516_5122506_-|hypothetical-protein
MKKLKFLCSGIIASITLTTCLSINSVYATSDEKNSLIQSKSSPNIPYSIQDPNNTEDPSGYWTKEKMQNAIPADEIKTNEKTTPKKQEAPSTEKPSNISDPVPPDTSGGIKALNVVVPSTAGKVFFSYSGRDYVCSASATNNDYKNLVITAGHCVHGGKGKGWHSNIAFAPAYNNGSTPYGIWNWKDARTFNSWINDSDFSHDQAFFTVYPRSGNNLINTVGGNGLSTGYGTNQPSVRIWGWPAENPYNGQLPYYCGGSTSSAGLFSSDAKMSCGMNGGASGGPWLRAIINENLGYVFAVTSRRSTSGTPTLYATPNSKDVKTMFDQMK
>NZ_CP007626.1|WP_018780612.1|5120047_5120761_-|methyltransferase-domain-containing-protein
MKETISSYEDLLDMLDSLLREPTQFWDDFYSNREKGVPFFTNKPDENLVNYFEKKLLNPGKVLELGCGPGRNAIYFAEKGCLVDAVDLSQESIQWATERAKEKNVNINFIYNNIFDLQIEEGTYDIVYDSGCFHHIAPHRRMSYINLVKKALKPGGYFAITCFVQGGELGGADITDWEVYKLQSFKGGLGFTDKKLRAIFKGFSEVEIRRMKEIKQSNKVFGVSGLWTALFTKNSTE
>NZ_CP007626.1|WP_006095027.1|5119161_5119500_-|DUF952-domain-containing-protein
MITKVMEKSEWEVAKAKGNIMEPSLMQEGFIHCSFLEQSLQVAEKHFSTEMELVLLVINPSLVEAEIKYELASNGQNYPHIYGTVNANAVVKVVELQKENGGYVLPVELEQK
>NZ_CP007626.1|WP_003203567.1|5130842_5131208_+|hypothetical-protein
MFEKLSLLFVSGALFMSLTACTPNYQKASAKNESSASLYTTKELQNEFPIGMPIDEYIAKKNKMNIKHPTSIPLPNGNVGRVLQTTDGFVVICGNEKEIFNVVVFRTLDEVKEYETSLREK
>NZ_CP007626.1|WP_018780620.1|5132169_5132559_+|hypothetical-protein
MDWHSITLTAAGVIGGGTAIVHGILMKRLIIKPIEAVFVTNGQISAPIQKLVRLLLHFTTLNWLISGLTLIAAAIWFKQDARLVTGLLAGSSFLYGAIISFWVMRRPHPSWILLSVALLLIVLGLTPVA
>NZ_CP007626.1|WP_003210117.1|5133399_5134527_-|alpha-helical-pore-forming-toxin-family-protein
MMKKLPYKILAVSTFLTMTTTYAVTPVATFASEIEQTNTGDMSLSANEEKMKTALQDAGVFAKSMNDYSCLLINNPDVNFEGIIINGYADLPIKIVQDQKNAREHAVKWDTQIKGQLLDTLTGIIEYDTKFDNHYGTLVEAIHTGNGDILKKGITDLRGEIQQNEEYAQKLIQELTKLKDDIGQDVRAFGSDKDLLQSILKNQGAAVEDDQKRLNEVLGQVNYQKDIESKGLTMVKIPFFPVMISGGIMIGDARSKLGWLEPELAKLRQTVDYKLTLNRVVGVAFNNIDQMHSAIDNALKSLTFMYDQWSDLDRQYGSVLQFIDKASEKADQNKFKFLLPNLNAAKDSWKTVRTDAFTLKEGIKELKMQPVTPQK
>NZ_CP007626.1|WP_018780621.1|5134808_5135936_-|alpha-helical-pore-forming-toxin-family-protein
MMKKIPYKLIAASAFLTLTTTSVVSPVAAYASGIEQTNNGETSLSANEAKMKEALQKAGLFAKSMNAYSYMLIKNPDVNFEGININGYVDLPGRIVQDQKNARAHAVIWDTQVKKQLLDTLTGIIEYDTTFDNYYETIVDAINTGDGETLKEGITDLRGEIQQNQKSAQKLIDDLTNLRNEIGKDVRAFGSNKELLSSILKNQGADVEADEKRLQQILDSVNYYKKLESDGFNVMKGAILGLPIIGGIIVGIARDNLSKLEPTLAELRQTVDYKITLNRVVGVAYINISEMHKALDDAINALTYMSTQWHDLDSQYSGVLGHINNASQKADQNKFKFLKPNLNAAKDSWKTLRTDAVTLKEGIKELKVESVTPQK
>NZ_CP007626.1|WP_018765647.1|5135972_5137193_-|HBL/NHE-enterotoxin-family-protein
MKKLPFKVLAVATLATFITATNGNTIHVLAQEQTAQEQKVGNYELGPEGLKKALAGTGSNLLVMDLYAKTMIKQPNVNLSNIDLGSEGAELIKNIHLNQELSRINANYWLDTAKPKIQKTARNIVNYDEQFKNYYDILEAAVQKKDKAELKEGINDLITTINTNSKEVTEVIKMLQDFKAKLYDNSIGFKNNVGGPDGKGGLTALLAGNNALIPQIQAEIEKLRSTQTEHFNNVLAWSIGGGLGAAILVIGAIAGAVVIVVTGGTATPAVIGGLSALGAAGIGLGTAAGVTASNHMNSYNEISKKIGELSTKADLASQAVISLTNAKATLTDLYQTVDQAILSLTSIQQQWNKMGANYTDLHDNIDSMQEHKFSLILDDLKAAKQSWSDIHKDAEFISKDIAFKQE
>NZ_CP007626.1|WP_040119596.1|5137263_5138583_-|HBL/NHE-enterotoxin-family-protein
MKNKIIKGFLITSIVTGAAIPINTLATPIVKAETQQENTDISSSLRKLGAQSKLIQTYIDQALMSPNVQLEEVPSLNTNQSLIKKDMTEWSSELYPKLILLNSKSKGFVTQFNSYYPTLKQFVDNKEDKEGFLDRLEVLQDKAMTNQENVQRQINELTDLKLQLDNKLKDLDTDVTKAQGVLSSEGTGKIDQLKNELQNTQKSIQNDLQQIALLPGALNEQGLTIFKEVYNLSKDIIEPAAQTAVAAYNKGKEINNSILEAEKKAEQEAKEKGKSALEIEAAKKEAREAIEKSKQAEIAAAAVTKTKEYNLTKVIDPEKIKKTYSAFAEVNKLTAEQRAHLDDLETQNQKFYDLTKNLTVADLQKSMLLIMQNDLHTFANQVDVELDLLKRYKEDLSLIKNSITKLSTNVDTTDQQSQKDTLRQLKNVTSYLEEQVYKF
>NZ_CP007626.1|WP_018780624.1|5140223_5141294_-|tetratricopeptide-repeat-protein
MDTHIIAKEEIITLLSSWYNAIISQHIIKAKHLKEEIDRNIHSIEEDSNISIYYSLLNFRYNLLVCDIDGSKDCLEKIAPFPEQTETFLKYYYHFFKAIYAISVGNHNEAKEQYEKAEKLLATIPDELEKAEFDYMFAVFHYQSLNPLLAAKYANKAKEVFSKHTGYEMKVASCQNTIGLACTKLRLYEIAEENFISALRIFEKYGEEQLIAKVKHNLGLLYADQNLSELAIKYLKDSLKNNPKTMFLLAREYYKLGENFLAADLIEQGYNLTKLKEYKCHFAILRELNKGAEIEELEKVIMTGIYYFKKENLWGHVKEYASILGNKFYDLSNDEKASRFFHIALDADKKDLEKGA
>NZ_CP007626.1|WP_018780625.1|5141498_5143202_-|M4-family-metallopeptidase
MKNKKTLATVALTTGLALTTVTPYGLGHAEETDQLQVQMQEDSFRTGELTRPSQKAPENVVKDALKEKTEQALSPKQVNGETGVDYKVLQKRGSYDGTTLVRMQQTYEGKEVYGHQLTAHVDKKGVIKSVSGDSAQNLKQEDLKKPINLSLEEAKQYIYTKYGNDIKFISEPEVKEVIFVDENNGQASNAYQVTFAAATPNYVSGTYLVNAHNGDMLKNMVQESDLKASEKLVGALKESRKSNLTSLTGTGKDDLGISRTFGISKQSNGKYALADYTRGQGIETYDVNYRDITKEESYYPGTLATSTSTTFNDPKAVSAHFLATKVYDFYKDKYKRNSFDNKGQKVVSVVHAWDSEDTNDPKNWQNALSANNGSMLVYGDPIVKAFDVAGHEFTHAVTSSESNLEYSGESGAINEALSDIMGTAIEKYINKGKFNWTMGEQTGSVFRDMANPSSVPSSTGVPYPDDYSEFNDFNGWDNGGVHFNSSIINKVAYLIAKGGTHNGVTVKGIGEDKMFDIFHYANTDELNMTSGFSELRSACLRVAANKYGANSTEVQAVQKAFDAAKIK
>NZ_CP007626.1|WP_018780626.1|5143884_5145981_-|AAA-family-ATPase
MSTIFEEELQRMKKTLSTMDEQLDKLEKIPVYYGEDFKEQILESMRESNRQNLRIGVQEPYFGRLDFQEDGQPEPNPIYIGKVGVSDEETMKPIVIDWRAPVASMFYSFTGGEELAFYHSPDGLVEGDVYLKRNIAIRKRELERVVDTYVKGSEDVSLADDFLLYRLGENKDNKLKDIVSTIQSEQNDIIRAEKNMPLLIQGVAGSGKTTIALHRLAFLIYEYREQLEAERMIVFAPNSLFLDYISSVLPELGVGNIRQTTFQDWALNTLDDAVKLKDTDEKLKEAFSINRDDEKVMLGKLKGTMKFKSFIEENIVQFEKNLLPTKDFEAWDKAFITVEEIRKWMQVEYKHYPLRKRRERLVGRIKRWIEIELKKFEGTNEKKALKKEATKRLNAYMKFWPKMSPLSFYSSMMKQKEILEVLPEELVQETEKNCRKKEVYVEDLAPLIHIHHRLAGIEIGQKFHHVVIDEAQDFSPFQIYILKEITMGNSFTILGDLSQAIYDYQGIEDWNDFKEVFQETGYYELTRSYRSTKEIIEFANEVIKNAEIPVGLATPVFRSGEKVKIISTDNQFAAIVKTLQHMQSENVKTIAVIGRTDDECRDIYEKLTATGITANVIEANQSKYEGGISVVPVYLAKGLEFDAVLLIDVDEVHYKGTKHDAKLLYVGCTRSLHDLRIFYSGEASPLIQGIQEEFYESK
>NZ_CP007626.1|WP_018780627.1|5146319_5147306_-|LLM-class-flavin-dependent-oxidoreductase
MKFSTLTIFDNYPDQLSRTSRQFYNEVLEQAIRAEEMNFDGVWFTEHHFSDFGINPSPAVLLAAVSQRTNRIRLGVGVSVLPLHNPIRVAEDYAMVDLLSNGRLDLGLGSGYAQKEFDGYNISLEDKTERFNESLEVLRKAWSGKPFSHQGKFFQYNDLKLNVQPIQAPFPPHWIATSSEKGVSHVASMGSNFMGLGFSKSRDELAKLIDTYKNMYLKSGYGNPDQLEIPVAFHVHVGETYVDAESNAKDPYQLFMNTPRGTNISYEDLKHKFNPVIGSPDEVIKQIQSYREIGVTNFMAVMNFGGLEHHKVLSSLDLFGKYVVPVCK

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Crispr_ID: NZ_CP007626_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007626_8

5129791-5129901

Orphan

Consensus_repeat	Method
CCTTCTGCATGGGCAACTTCTCCACT	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP007626_8

>merge|NZ_CP007626|8|5129791-5129901|CRISPRCasFinder
CCTTTTGCATGGGAAAAGTCTCCACTAGAGATGGTTAAGTTACCTTCCGCATGAGGTGATTCACCACTCGCTTGTGAACCTCCTCCCTCAGCGTGTGAAAAATCTCCAATG

>NZ_CP007626|8|7|5129791-5129901|CRISPRCasFinder
CCTTTTGCATGGGAAAAGTCTCCACT	AGAGATGGTTAAGTTA
CCTTCCGCATGAGGTGATTCACCACT	CGCTTGTGAACCTCCT
CCCTCAGCGTGTGAAAAATCTCCAATG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007626.1\|WP_018780617.1\|5127453_5129457_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP007626.1\|WP_006097101.1\|5125614_5125962_+\|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl\|CDD\|308985
NZ_CP007626.1\|WP_040119596.1\|5137263_5138583_-\|HBL/NHE-enterotoxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP007626.1\|WP_018780624.1\|5140223_5141294_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|376220
NZ_CP007626.1\|WP_003210117.1\|5133399_5134527_-\|alpha-helical-pore-forming-toxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP007626.1\|WP_078211891.1\|5123692_5123890_-\|choloylglycine-hydrolase	unknown	unknown	gnl\|CDD\|367486
NZ_CP007626.1\|WP_018780621.1\|5134808_5135936_-\|alpha-helical-pore-forming-toxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP007626.1\|WP_018780613.1\|5121516_5122506_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226119
NZ_CP007626.1\|WP_018780626.1\|5143884_5145981_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226482
NZ_CP007626.1\|WP_018780615.1\|5124737_5125151_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|136040
NZ_CP007626.1\|WP_018780612.1\|5120047_5120761_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|379312
NZ_CP007626.1\|WP_006097103.1\|5126976_5127189_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_003203567.1\|5130842_5131208_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_080740380.1\|5126259_5126775_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007626.1\|WP_018780625.1\|5141498_5143202_-\|M4-family-metallopeptidase	unknown	unknown	gnl\|CDD\|341060
NZ_CP007626.1\|WP_006095027.1\|5119161_5119500_-\|DUF952-domain-containing-protein	unknown	unknown	gnl\|CDD\|377607
NZ_CP007626.1\|WP_018765647.1\|5135972_5137193_-\|HBL/NHE-enterotoxin-family-protein	unknown	unknown	gnl\|CDD\|368615
NZ_CP007626.1\|WP_003204648.1\|5123107_5123554_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP007626.1\|WP_018780627.1\|5146319_5147306_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|366009
NZ_CP007626.1\|WP_018780620.1\|5132169_5132559_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007626.1\|WP_018780617.1\|5127453_5129457_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.50738e-57
NZ_CP007626.1\|WP_006097101.1\|5125614_5125962_+\|YkgJ-family-cysteine-cluster-protein	gnl\|CDD\|308985	pfam03692, CxxCxxCC, Putative zinc- or iron-chelating domain. This family of proteins contains 8 conserved cysteines. It has in the past been annotated as being one of the complex of proteins of the flagellar Fli complex. However this was due to a mis-annotation of the original Salmonella LT2 Genbank entry of 'fliB'. With all its conserved cysteines it is possibly a domain that chelates iron or zinc ions.	3.21661e-09
NZ_CP007626.1\|WP_018780624.1\|5140223_5141294_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|376220	pfam18801, RapH_N, response regulator aspartate phosphatase H, N terminal. Rap proteins consist of a N-terminal 3-helix bundle and a tetratricopeptide domain. This entry represents the conserved region of the C-terminal bundle.	8.87341e-20
NZ_CP007626.1\|WP_078211891.1\|5123692_5123890_-\|choloylglycine-hydrolase	gnl\|CDD\|367486	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.	7.59464e-07
NZ_CP007626.1\|WP_003204648.1\|5123107_5123554_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.32209e-10
NZ_CP007626.1\|WP_018780621.1\|5134808_5135936_-\|alpha-helical-pore-forming-toxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	1.89283e-59
NZ_CP007626.1\|WP_018780613.1\|5121516_5122506_-\|hypothetical-protein	gnl\|CDD\|226119	COG3591, COG3591, V8-like Glu-specific endopeptidase [Amino acid transport and metabolism].	0.000440697
NZ_CP007626.1\|WP_018780626.1\|5143884_5145981_-\|AAA-family-ATPase	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	1.78542e-134
NZ_CP007626.1\|WP_018780615.1\|5124737_5125151_+\|hypothetical-protein	gnl\|CDD\|136040	PRK06763, PRK06763, F0F1 ATP synthase subunit alpha; Validated.	5.21427e-11
NZ_CP007626.1\|WP_018780612.1\|5120047_5120761_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	5.75683e-29
NZ_CP007626.1\|WP_018780627.1\|5146319_5147306_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|366009	pfam00296, Bac_luciferase, Luciferase-like monooxygenase.	1.2676e-66
NZ_CP007626.1\|WP_018780625.1\|5141498_5143202_-\|M4-family-metallopeptidase	gnl\|CDD\|341060	cd09597, M4_TLP, Peptidase M4 family including thermolysin, protealysin, aureolysin, and neutral protease. This peptidase M4 family includes several endopeptidases such as thermolysin (EC 3.4.24.27), aureolysin (the extracellular metalloproteinase from Staphylococcus aureus), neutral protease from Bacillus cereus, protealysin, and bacillolysin (EC 3.4.24.28). Typically, the M4 peptidases consist of a presequence (signal sequence), a propeptide sequence, and a peptidase unit. The presequence is cleaved off during export while the propeptide has inhibitory and chaperone functions and facilitates folding. The propeptide remains attached until the peptidase is secreted and can be safely activated. All peptidases in this family bind a single catalytic zinc ion which is tetrahedrally co-ordinated by three amino acid ligands and a water molecule that forms the nucleophile on activation during catalysis. The active site is found between two sub-domains; the N-terminal domain contains the HEXXH zinc-binding motif while the helical C-terminal domain, which is unique for the family, carries the third zinc ligand. These peptidases are secreted eubacterial endopeptidases from Gram-positive or Gram-negative sources that degrade extracellular proteins and peptides for bacterial nutrition. They are selectively inhibited by Steptomyces metalloproteinase inhibitor (SMPI) as well as by phosphoramidon from Streptomyces tanashiensis. A large number of these enzymes are implicated as key factors in the pathogenesis of various diseases, including gastritis, peptic ulcer, gastric carcinoma, cholera and several types of bacterial infections, and are therefore important drug targets. Some enzymes of the family can function at extremes of temperatures, while some function in organic solvents, thus rendering them novel targets for biotechnological applications. Thermolysin is widely used as a nonspecific protease to obtain fragments for peptide sequencing. It has also been used in production of the artificial sweetener aspartame.	1.69096e-97
NZ_CP007626.1\|WP_006095027.1\|5119161_5119500_-\|DUF952-domain-containing-protein	gnl\|CDD\|377607	pfam06108, DUF952, Protein of unknown function (DUF952). This family consists of several hypothetical bacterial and plant proteins of unknown function.	3.82239e-29
NZ_CP007626.1\|WP_018765647.1\|5135972_5137193_-\|HBL/NHE-enterotoxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	3.87798e-49
NZ_CP007626.1\|WP_003210117.1\|5133399_5134527_-\|alpha-helical-pore-forming-toxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	1.72895e-54
NZ_CP007626.1\|WP_040119596.1\|5137263_5138583_-\|HBL/NHE-enterotoxin-family-protein	gnl\|CDD\|368615	pfam05791, Bacillus_HBL, Bacillus haemolytic enterotoxin (HBL). This family consists of several Bacillus haemolytic enterotoxins (HblC, HblD, HblA, NheA, and NheB) which can cause food poisoning in humans.	2.39125e-40

>NZ_CP007626.1|WP_018780617.1|5127453_5129457_-|serine-hydrolase
MERRSHRIIHHFRSLLVISLCFFLVFLGGNNSKAETVSSIALNAIDVEAFTNKVIPEKMKAENAPGVAIVVVKDDQILFQKGYGFSNKEQNIPIDPKKTVFRLASVSKVFTASAVMQLVEQGKIDLNKDIVNYMGGLKYQNNVGEPVTMKHLLTHTTGFDDVDPRLGDIHDQINDYTKLKDYVEENMPTVVRKPGDTYTYDNFASMLQGYIVQNLTDTPFYKYMAKNIFYPLEMQNSSFVMTNFIKDKLATGYDKKGDVIPFYQTRPTDMPQGSMFSTGSDVANFMIAQLNGGKFKNKQILKTETVQDMQQTKFALHPKYPNMTYGFEFFSPQSHNGQYVFGKGGNIPGFSSLMWLIPEHKLGVFVVTNKDSSLLPYKLFDEFMNHYFPDKTKPEYLKPSEEELKKFEGVYRDLRVKNLITHVKISEGKLFVADKRYGKQELKQIDPLLFEDEKGNYMAFKLHKDGTVKEMIHWNSGSSAVKVSEPKRFQDVEVNHPYAKFIDPLHQYDILKANKEGSFVPEAPLTRGEFSYWLSQIAYFAPPSKKDPVFSDVKGHQYASHIQKLYELGILYEKEGEHFYPDRAITRQEAAWIAWHYLEMLEAPPAEATLKGQTDDWAIESVKNIVGHHLVGPEVIYNEDGSADYLSKQIMKRQEAAALLLFVMLGS
>NZ_CP007626.1|WP_006097103.1|5126976_5127189_-|hypothetical-protein
MLKKLVVGVLATGILLTRAGGALAAEEFPYQVKTKGFNGQPVSIGFDNKTDLEDYLKKHPVPHCHKAKFL
>NZ_CP007626.1|WP_080740380.1|5126259_5126775_-|hypothetical-protein
MGVLSTGLLAGAMLFGVSSPQAYADSPAKPYQVITDGFDGEQTTIGFENKTDFENYLESHPVPKSNKVQPLASIYSTFYYDNDLKGSRFTVNASRNPVVVVNFSGSNNDNVSSILTHPYGDYTTIYEHVNAEGRALAIVNNGKYINLTDVSMGDGARTWNDEVSSAIVKSN
>NZ_CP007626.1|WP_006097101.1|5125614_5125962_+|YkgJ-family-cysteine-cluster-protein
MEGLPCNGCKGMCCGPVPITEEEFKKIKKKIKSMPTKKRLDLKSQQRYFGTCIFYDEINDRCGIHPVRPIICRAFGYYNNLVCFRKPEVVSAKNYMSNEQPIGILSVDFTWKDFS
>NZ_CP007626.1|WP_018780615.1|5124737_5125151_+|hypothetical-protein
MKKAILAGALGVAVLSGMNLPGLEVPKASAATMDLEIQEVTKYYSLSSYEVSQKESFNLKKGEELTVFVNNSGFPISYTVFDADNQVIGTYNANSPYGRVFKAQKDGNISVQFQAGVNSSFMKKMNFTAKFALSKFN
>NZ_CP007626.1|WP_078211891.1|5123692_5123890_-|choloylglycine-hydrolase
MREPVVTGLQFMVVVRAILETCKNIEEAVYAVKNMPVGTNMNLLLADANGEATLVGTYDGVKYII
>NZ_CP007626.1|WP_003204648.1|5123107_5123554_-|GNAT-family-N-acetyltransferase
MNKLSLKPIDKSNWEEAIKLSVKEEQRTFIASNLYSIAEVQFLDNFYANGIYLDNKLIGFAMFGIDSDDNNYWIYRLMIDKEYQGQGIGIQAIFLIIEKIRSINNKNIPLIMIGYNPKNLSAKIAYRKAGFVETEVSSWGEQLAKFTL
>NZ_CP007626.1|WP_018780613.1|5121516_5122506_-|hypothetical-protein
MKKLKFLCSGIIASITLTTCLSINSVYATSDEKNSLIQSKSSPNIPYSIQDPNNTEDPSGYWTKEKMQNAIPADEIKTNEKTTPKKQEAPSTEKPSNISDPVPPDTSGGIKALNVVVPSTAGKVFFSYSGRDYVCSASATNNDYKNLVITAGHCVHGGKGKGWHSNIAFAPAYNNGSTPYGIWNWKDARTFNSWINDSDFSHDQAFFTVYPRSGNNLINTVGGNGLSTGYGTNQPSVRIWGWPAENPYNGQLPYYCGGSTSSAGLFSSDAKMSCGMNGGASGGPWLRAIINENLGYVFAVTSRRSTSGTPTLYATPNSKDVKTMFDQMK
>NZ_CP007626.1|WP_018780612.1|5120047_5120761_-|methyltransferase-domain-containing-protein
MKETISSYEDLLDMLDSLLREPTQFWDDFYSNREKGVPFFTNKPDENLVNYFEKKLLNPGKVLELGCGPGRNAIYFAEKGCLVDAVDLSQESIQWATERAKEKNVNINFIYNNIFDLQIEEGTYDIVYDSGCFHHIAPHRRMSYINLVKKALKPGGYFAITCFVQGGELGGADITDWEVYKLQSFKGGLGFTDKKLRAIFKGFSEVEIRRMKEIKQSNKVFGVSGLWTALFTKNSTE
>NZ_CP007626.1|WP_006095027.1|5119161_5119500_-|DUF952-domain-containing-protein
MITKVMEKSEWEVAKAKGNIMEPSLMQEGFIHCSFLEQSLQVAEKHFSTEMELVLLVINPSLVEAEIKYELASNGQNYPHIYGTVNANAVVKVVELQKENGGYVLPVELEQK
>NZ_CP007626.1|WP_003203567.1|5130842_5131208_+|hypothetical-protein
MFEKLSLLFVSGALFMSLTACTPNYQKASAKNESSASLYTTKELQNEFPIGMPIDEYIAKKNKMNIKHPTSIPLPNGNVGRVLQTTDGFVVICGNEKEIFNVVVFRTLDEVKEYETSLREK
>NZ_CP007626.1|WP_018780620.1|5132169_5132559_+|hypothetical-protein
MDWHSITLTAAGVIGGGTAIVHGILMKRLIIKPIEAVFVTNGQISAPIQKLVRLLLHFTTLNWLISGLTLIAAAIWFKQDARLVTGLLAGSSFLYGAIISFWVMRRPHPSWILLSVALLLIVLGLTPVA
>NZ_CP007626.1|WP_003210117.1|5133399_5134527_-|alpha-helical-pore-forming-toxin-family-protein
MMKKLPYKILAVSTFLTMTTTYAVTPVATFASEIEQTNTGDMSLSANEEKMKTALQDAGVFAKSMNDYSCLLINNPDVNFEGIIINGYADLPIKIVQDQKNAREHAVKWDTQIKGQLLDTLTGIIEYDTKFDNHYGTLVEAIHTGNGDILKKGITDLRGEIQQNEEYAQKLIQELTKLKDDIGQDVRAFGSDKDLLQSILKNQGAAVEDDQKRLNEVLGQVNYQKDIESKGLTMVKIPFFPVMISGGIMIGDARSKLGWLEPELAKLRQTVDYKLTLNRVVGVAFNNIDQMHSAIDNALKSLTFMYDQWSDLDRQYGSVLQFIDKASEKADQNKFKFLLPNLNAAKDSWKTVRTDAFTLKEGIKELKMQPVTPQK
>NZ_CP007626.1|WP_018780621.1|5134808_5135936_-|alpha-helical-pore-forming-toxin-family-protein
MMKKIPYKLIAASAFLTLTTTSVVSPVAAYASGIEQTNNGETSLSANEAKMKEALQKAGLFAKSMNAYSYMLIKNPDVNFEGININGYVDLPGRIVQDQKNARAHAVIWDTQVKKQLLDTLTGIIEYDTTFDNYYETIVDAINTGDGETLKEGITDLRGEIQQNQKSAQKLIDDLTNLRNEIGKDVRAFGSNKELLSSILKNQGADVEADEKRLQQILDSVNYYKKLESDGFNVMKGAILGLPIIGGIIVGIARDNLSKLEPTLAELRQTVDYKITLNRVVGVAYINISEMHKALDDAINALTYMSTQWHDLDSQYSGVLGHINNASQKADQNKFKFLKPNLNAAKDSWKTLRTDAVTLKEGIKELKVESVTPQK
>NZ_CP007626.1|WP_018765647.1|5135972_5137193_-|HBL/NHE-enterotoxin-family-protein
MKKLPFKVLAVATLATFITATNGNTIHVLAQEQTAQEQKVGNYELGPEGLKKALAGTGSNLLVMDLYAKTMIKQPNVNLSNIDLGSEGAELIKNIHLNQELSRINANYWLDTAKPKIQKTARNIVNYDEQFKNYYDILEAAVQKKDKAELKEGINDLITTINTNSKEVTEVIKMLQDFKAKLYDNSIGFKNNVGGPDGKGGLTALLAGNNALIPQIQAEIEKLRSTQTEHFNNVLAWSIGGGLGAAILVIGAIAGAVVIVVTGGTATPAVIGGLSALGAAGIGLGTAAGVTASNHMNSYNEISKKIGELSTKADLASQAVISLTNAKATLTDLYQTVDQAILSLTSIQQQWNKMGANYTDLHDNIDSMQEHKFSLILDDLKAAKQSWSDIHKDAEFISKDIAFKQE
>NZ_CP007626.1|WP_040119596.1|5137263_5138583_-|HBL/NHE-enterotoxin-family-protein
MKNKIIKGFLITSIVTGAAIPINTLATPIVKAETQQENTDISSSLRKLGAQSKLIQTYIDQALMSPNVQLEEVPSLNTNQSLIKKDMTEWSSELYPKLILLNSKSKGFVTQFNSYYPTLKQFVDNKEDKEGFLDRLEVLQDKAMTNQENVQRQINELTDLKLQLDNKLKDLDTDVTKAQGVLSSEGTGKIDQLKNELQNTQKSIQNDLQQIALLPGALNEQGLTIFKEVYNLSKDIIEPAAQTAVAAYNKGKEINNSILEAEKKAEQEAKEKGKSALEIEAAKKEAREAIEKSKQAEIAAAAVTKTKEYNLTKVIDPEKIKKTYSAFAEVNKLTAEQRAHLDDLETQNQKFYDLTKNLTVADLQKSMLLIMQNDLHTFANQVDVELDLLKRYKEDLSLIKNSITKLSTNVDTTDQQSQKDTLRQLKNVTSYLEEQVYKF
>NZ_CP007626.1|WP_018780624.1|5140223_5141294_-|tetratricopeptide-repeat-protein
MDTHIIAKEEIITLLSSWYNAIISQHIIKAKHLKEEIDRNIHSIEEDSNISIYYSLLNFRYNLLVCDIDGSKDCLEKIAPFPEQTETFLKYYYHFFKAIYAISVGNHNEAKEQYEKAEKLLATIPDELEKAEFDYMFAVFHYQSLNPLLAAKYANKAKEVFSKHTGYEMKVASCQNTIGLACTKLRLYEIAEENFISALRIFEKYGEEQLIAKVKHNLGLLYADQNLSELAIKYLKDSLKNNPKTMFLLAREYYKLGENFLAADLIEQGYNLTKLKEYKCHFAILRELNKGAEIEELEKVIMTGIYYFKKENLWGHVKEYASILGNKFYDLSNDEKASRFFHIALDADKKDLEKGA
>NZ_CP007626.1|WP_018780625.1|5141498_5143202_-|M4-family-metallopeptidase
MKNKKTLATVALTTGLALTTVTPYGLGHAEETDQLQVQMQEDSFRTGELTRPSQKAPENVVKDALKEKTEQALSPKQVNGETGVDYKVLQKRGSYDGTTLVRMQQTYEGKEVYGHQLTAHVDKKGVIKSVSGDSAQNLKQEDLKKPINLSLEEAKQYIYTKYGNDIKFISEPEVKEVIFVDENNGQASNAYQVTFAAATPNYVSGTYLVNAHNGDMLKNMVQESDLKASEKLVGALKESRKSNLTSLTGTGKDDLGISRTFGISKQSNGKYALADYTRGQGIETYDVNYRDITKEESYYPGTLATSTSTTFNDPKAVSAHFLATKVYDFYKDKYKRNSFDNKGQKVVSVVHAWDSEDTNDPKNWQNALSANNGSMLVYGDPIVKAFDVAGHEFTHAVTSSESNLEYSGESGAINEALSDIMGTAIEKYINKGKFNWTMGEQTGSVFRDMANPSSVPSSTGVPYPDDYSEFNDFNGWDNGGVHFNSSIINKVAYLIAKGGTHNGVTVKGIGEDKMFDIFHYANTDELNMTSGFSELRSACLRVAANKYGANSTEVQAVQKAFDAAKIK
>NZ_CP007626.1|WP_018780626.1|5143884_5145981_-|AAA-family-ATPase
MSTIFEEELQRMKKTLSTMDEQLDKLEKIPVYYGEDFKEQILESMRESNRQNLRIGVQEPYFGRLDFQEDGQPEPNPIYIGKVGVSDEETMKPIVIDWRAPVASMFYSFTGGEELAFYHSPDGLVEGDVYLKRNIAIRKRELERVVDTYVKGSEDVSLADDFLLYRLGENKDNKLKDIVSTIQSEQNDIIRAEKNMPLLIQGVAGSGKTTIALHRLAFLIYEYREQLEAERMIVFAPNSLFLDYISSVLPELGVGNIRQTTFQDWALNTLDDAVKLKDTDEKLKEAFSINRDDEKVMLGKLKGTMKFKSFIEENIVQFEKNLLPTKDFEAWDKAFITVEEIRKWMQVEYKHYPLRKRRERLVGRIKRWIEIELKKFEGTNEKKALKKEATKRLNAYMKFWPKMSPLSFYSSMMKQKEILEVLPEELVQETEKNCRKKEVYVEDLAPLIHIHHRLAGIEIGQKFHHVVIDEAQDFSPFQIYILKEITMGNSFTILGDLSQAIYDYQGIEDWNDFKEVFQETGYYELTRSYRSTKEIIEFANEVIKNAEIPVGLATPVFRSGEKVKIISTDNQFAAIVKTLQHMQSENVKTIAVIGRTDDECRDIYEKLTATGITANVIEANQSKYEGGISVVPVYLAKGLEFDAVLLIDVDEVHYKGTKHDAKLLYVGCTRSLHDLRIFYSGEASPLIQGIQEEFYESK
>NZ_CP007626.1|WP_018780627.1|5146319_5147306_-|LLM-class-flavin-dependent-oxidoreductase
MKFSTLTIFDNYPDQLSRTSRQFYNEVLEQAIRAEEMNFDGVWFTEHHFSDFGINPSPAVLLAAVSQRTNRIRLGVGVSVLPLHNPIRVAEDYAMVDLLSNGRLDLGLGSGYAQKEFDGYNISLEDKTERFNESLEVLRKAWSGKPFSHQGKFFQYNDLKLNVQPIQAPFPPHWIATSSEKGVSHVASMGSNFMGLGFSKSRDELAKLIDTYKNMYLKSGYGNPDQLEIPVAFHVHVGETYVDAESNAKDPYQLFMNTPRGTNISYEDLKHKFNPVIGSPDEVIKQIQSYREIGVTNFMAVMNFGGLEHHKVLSSLDLFGKYVVPVCK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP007626_4	4.1\|2152786\|41\|NZ_CP007626\|CRISPRCasFinder	2152786-2152826	41	NZ_CP007626.1	2144807-2144847	2	0.951

1. spacer 4.1|2152786|41|NZ_CP007626|CRISPRCasFinder matches to position: 2144807-2144847, mismatch: 2, identity: 0.951

ttctccctttgttttaaattcggcatggggcgaaaaaagga	CRISPR spacer
ttctccctttgttttaaactcggcatggggccaaaaaagga	Protospacer
******************.************ *********

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007626_1	1.1\|411590\|49\|NZ_CP007626\|PILER-CR	411590-411638	49	NZ_CP040783	Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence	424101-424149	4	0.918
NZ_CP007626_1	1.1\|411590\|49\|NZ_CP007626\|PILER-CR	411590-411638	49	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	154619-154667	5	0.898
NZ_CP007626_1	1.1\|411590\|49\|NZ_CP007626\|PILER-CR	411590-411638	49	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	415597-415645	5	0.898
NZ_CP007626_1	1.2\|411668\|31\|NZ_CP007626\|PILER-CR	411668-411698	31	NZ_CP013615	Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence	390922-390952	10	0.677

1. spacer 1.1|411590|49|NZ_CP007626|PILER-CR matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 4, identity: 0.918

cgatat-aaatatataagagccttgctacatttttttgtagtaaggctct	CRISPR spacer
-aatataaaaaatataagagccttgctacattttattgtagtaaggctct	Protospacer
 .**** *** *********************** ***************

2. spacer 1.1|411590|49|NZ_CP007626|PILER-CR matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 5, identity: 0.898

cgata-taaatatataagagccttgctacatttttttgtagtaaggctct	CRISPR spacer
-attattaaaaatataagagccttgctacattttattgtagtaaggctct	Protospacer
 . ** **** *********************** ***************

3. spacer 1.1|411590|49|NZ_CP007626|PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 5, identity: 0.898

cgatat-aaatatataagagccttgctacatttttttgtagtaaggctct	CRISPR spacer
-attataaaaaatataagagccttgctacattttattgtagtaaggctct	Protospacer
 . *** *** *********************** ***************

4. spacer 1.2|411668|31|NZ_CP007626|PILER-CR matches to NZ_CP013615 (Clostridium perfringens strain JP838 plasmid pJFP838A, complete sequence) position: , mismatch: 10, identity: 0.677

ctatccatttaaatgtattggtactcaaaaa	CRISPR spacer
tagaaagtttaaaagtattgatactcaaaag	Protospacer
. .   .****** ******.*********.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

735538 : 742658

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006097713.1\|735538_735838_-	hypothetical protein	A0A1B1P853	Bacillus_phage	9.4e-13	74.5
WP_006097712.1\|737571_738159_-	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	1.1e-44	48.4
WP_018767833.1\|738202_738919_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	2.0e-53	43.3
WP_006097709.1\|738911_739403_-	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	4.0e-61	71.1
WP_003203747.1\|739402_740068_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.8e-65	56.0
WP_006097707.1\|740080_740869_-	hypothetical protein	NA	NA	NA	NA
WP_018782253.1\|740871_741663_-	hypothetical protein	NA	NA	NA	NA
WP_018767830.1\|741659_742658_-	ATP-binding cassette domain-containing protein	A0A2R8FG22	Brazilian_cedratvirus	7.3e-17	28.2

DBSCAN-SWA_2

756820 : 846192

Bacillus_phage(60.53%)

integrase,coat,tRNA,plate,bacteriocin,terminase,transposase,tail,protease

attL 829855:829871|attR 831773:831789

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040118942.1\|756820_757813_-\|protease	collagenolytic protease	NA	NA	NA	NA
WP_003203117.1\|758126_758729_-	DUF2812 domain-containing protein	NA	NA	NA	NA
WP_018782267.1\|758733_759036_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_003210015.1\|759335_759755_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_018782268.1\|760202_761132_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_080548478.1\|761294_761498_-\|transposase	IS3 family transposase	A0A2I7SC85	Paenibacillus_phage	6.4e-13	51.6
WP_033794526.1\|761463_761988_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_018782271.1\|763192_763918_-	metallophosphoesterase family protein	NA	NA	NA	NA
WP_018782272.1\|764112_764376_+	DUF4352 domain-containing protein	A0A1B1P898	Bacillus_phage	2.4e-12	44.3
WP_018764670.1\|764660_764762_+	YjcZ family sporulation protein	NA	NA	NA	NA
WP_003203100.1\|765068_766463_-	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	7.7e-25	25.0
WP_018782273.1\|766570_767476_+	DMT family transporter	NA	NA	NA	NA
WP_018782275.1\|768418_769048_-	hypothetical protein	NA	NA	NA	NA
WP_003203089.1\|770217_770415_+	aspartyl-phosphate phosphatase Spo0E family protein	NA	NA	NA	NA
WP_003203088.1\|770676_770928_-	hypothetical protein	NA	NA	NA	NA
WP_040118943.1\|772214_774830_-	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	1.1e-37	33.8
WP_018782278.1\|775615_777547_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	6.2e-65	30.7
WP_018782279.1\|777555_780228_-	DNA mismatch repair protein MutS	A0A1V0SGG8	Hokovirus	2.1e-34	23.2
WP_003199431.1\|780406_780949_-\|coat	outer spore coat protein CotE	NA	NA	NA	NA
WP_006095670.1\|781078_781510_-	hypothetical protein	NA	NA	NA	NA
WP_003199427.1\|781513_783043_-\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_018764680.1\|783492_784359_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_018782280.1\|784345_786103_-	2-oxoacid:acceptor oxidoreductase subunit alpha	NA	NA	NA	NA
WP_033794533.1\|786361_787285_-	membrane dipeptidase	NA	NA	NA	NA
WP_000404341.1\|787347_787608_-	stage V sporulation protein SpoVS	J9PTX7	Bacillus_phage	8.4e-10	43.8
WP_003199419.1\|787757_788552_-	TIGR00282 family metallophosphoesterase	NA	NA	NA	NA
WP_016115916.1\|788734_790303_-	ribonuclease Y	NA	NA	NA	NA
WP_006095669.1\|790734_791760_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	7.2e-137	73.6
WP_018782282.1\|791902_793141_-	competence/damage-inducible protein A	NA	NA	NA	NA
WP_018782283.1\|793161_793740_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_080740049.1\|793804_794731_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_016115921.1\|794743_795529_-	DUF3388 domain-containing protein	NA	NA	NA	NA
WP_003199403.1\|795665_795914_-	DUF3243 domain-containing protein	NA	NA	NA	NA
WP_018782285.1\|795993_796707_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_003209671.1\|796891_798178_-	insulinase family protein	A0A2H4UVM3	Bodo_saltans_virus	9.1e-12	27.7
WP_018782286.1\|798178_799453_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	5.9e-56	30.3
WP_003199393.1\|799655_800615_-	ABC transporter permease	NA	NA	NA	NA
WP_018764690.1\|800615_801674_-	ABC transporter permease	NA	NA	NA	NA
WP_003199388.1\|801666_803199_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	8.3e-12	27.6
WP_003199386.1\|803304_804381_-	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_000114183.1\|804469_805195_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_029427439.1\|805733_808133_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.6e-89	51.4
WP_018782288.1\|808346_808550_-	ribonuclease	NA	NA	NA	NA
WP_003203721.1\|808546_809296_-	translocation-enhancing protein TepA	NA	NA	NA	NA
WP_029427442.1\|809397_811068_-	ribonuclease J	NA	NA	NA	NA
WP_003203717.1\|811512_812391_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_018782290.1\|812402_813635_-	aspartate kinase	NA	NA	NA	NA
WP_003203711.1\|813658_814705_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_003203709.1\|814854_815031_-	dipicolinate synthase	NA	NA	NA	NA
WP_018782292.1\|815772_816345_+	hypothetical protein	NA	NA	NA	NA
WP_006095700.1\|816429_816636_-	hypothetical protein	NA	NA	NA	NA
WP_003203698.1\|816635_817730_-	tetratricopeptide repeat protein	A0A2H4J8G3	uncultured_Caudovirales_phage	1.0e-101	53.8
WP_006095702.1\|817888_818947_-	N-acetylmuramoyl-L-alanine amidase	A0A1B1P878	Bacillus_phage	1.3e-168	83.1
WP_018782293.1\|818948_819209_-\|bacteriocin	bacteriocin biosynthesis protein	A0A1B1P7Q9	Bacillus_phage	5.9e-11	46.0
WP_018782294.1\|819253_819742_-	hypothetical protein	NA	NA	NA	NA
WP_003210100.1\|819895_820120_-	hypothetical protein	A0A1B1P780	Bacillus_phage	2.9e-27	91.9
WP_018782698.1\|820263_821658_-\|plate	BppU family phage baseplate upper protein	A0A1C8E978	Bacillus_phage	9.1e-58	51.0
WP_080740052.1\|821654_822620_-\|tail	tail fiber domain-containing protein	A0A1B1P770	Bacillus_phage	1.1e-94	56.7
WP_018782701.1\|824178_824634_-	hypothetical protein	NA	NA	NA	NA
WP_123767182.1\|824862_826467_-\|terminase	terminase large subunit	A0A1B1P766	Bacillus_phage	1.4e-232	73.3
WP_018782703.1\|826498_827020_-	DNA-directed RNA polymerase sigma-70 factor	E2ELI1	Clostridium_phage	3.5e-31	48.8
WP_018780956.1\|827209_827524_-	hypothetical protein	A0A1B1P767	Bacillus_phage	9.8e-45	88.5
WP_003199584.1\|827526_827721_-	HNH endonuclease	A0A1B1P757	Bacillus_phage	7.9e-29	90.6
WP_018780954.1\|827834_828077_-	hypothetical protein	A0A1B1P743	Bacillus_phage	3.4e-21	65.0
WP_003199580.1\|828285_828477_-	hypothetical protein	A0A0Y0AUI4	Bacillus_phage	5.2e-17	58.1
WP_018780953.1\|829111_829627_-	DUF3231 family protein	NA	NA	NA	NA
829855:829871	attL	NA	NA	NA	NA
WP_018780952.1\|829972_830275_+	WGxxGxxG-CTERM domain-containing protein	NA	NA	NA	NA
WP_018780951.1\|830637_831180_-\|integrase	site-specific integrase	D2XR58	Bacillus_phage	2.0e-90	92.2
WP_003199569.1\|831176_831647_-	ArpU family transcriptional regulator	D2XR57	Bacillus_phage	7.7e-70	85.3
WP_003208133.1\|832971_833166_+	hypothetical protein	NA	NA	NA	NA
831773:831789	attR	NA	NA	NA	NA
WP_003208136.1\|833323_833797_+	hypothetical protein	NA	NA	NA	NA
WP_003199563.1\|833849_834041_-	DUF3954 domain-containing protein	D2XR48	Bacillus_phage	1.1e-25	92.1
WP_018780949.1\|834117_834480_-	hypothetical protein	D2XR47	Bacillus_phage	3.7e-48	77.5
WP_003199559.1\|834454_834643_-	hypothetical protein	D2XR45	Bacillus_phage	1.7e-12	81.1
WP_018780948.1\|834642_835965_-	replicative DNA helicase	D2XR44	Bacillus_phage	1.4e-209	84.3
WP_018780947.1\|835961_836888_-	DnaD domain protein	D2XR43	Bacillus_phage	1.4e-139	85.5
WP_040118944.1\|837168_837453_-	hypothetical protein	D2XR42	Bacillus_phage	1.6e-22	55.3
WP_040118945.1\|837639_837861_-	hypothetical protein	NA	NA	NA	NA
WP_040118946.1\|837874_838462_-	helix-turn-helix transcriptional regulator	D2XR41	Bacillus_phage	2.0e-75	71.5
WP_040118947.1\|838550_838799_-	hypothetical protein	NA	NA	NA	NA
WP_040118948.1\|838851_839040_-	helix-turn-helix transcriptional regulator	A0A2H4J4N8	uncultured_Caudovirales_phage	1.9e-11	54.2
WP_040118949.1\|839195_839630_+	helix-turn-helix domain-containing protein	A0A2P1JU09	Anoxybacillus_phage	7.0e-33	53.1
WP_040118950.1\|839646_840087_+	ImmA/IrrE family metallo-endopeptidase	D2XR38	Bacillus_phage	8.9e-60	78.2
WP_040118951.1\|840110_840833_+	hypothetical protein	NA	NA	NA	NA
WP_040118952.1\|841189_842737_+	recombinase family protein	I3VYZ3	Thermoanaerobacterium_phage	9.2e-144	53.8
WP_018780935.1\|843191_844094_-	dipicolinic acid synthetase subunit A	NA	NA	NA	NA
WP_029426914.1\|844504_844756_-	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
WP_018780934.1\|844953_846192_-	insulinase family protein	G3MBJ8	Bacillus_virus	3.4e-56	34.0

DBSCAN-SWA_3

2417119 : 2467576

Bacillus_virus(14.29%)

integrase,tRNA,transposase,holin,protease

attL 2440325:2440343|attR 2470183:2470201

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003202485.1\|2417119_2417812_-\|holin	antiholin-like protein LrgB	NA	NA	NA	NA
WP_018782431.1\|2417847_2418279_-\|holin	antiholin-like murein hydrolase modulator LrgA	NA	NA	NA	NA
WP_018782432.1\|2418411_2419152_-	response regulator	NA	NA	NA	NA
WP_018782433.1\|2419129_2420902_-	sensor histidine kinase	Q9EYF3	Enterobacteria_phage	7.2e-68	29.6
WP_003202478.1\|2420976_2421132_+	hypothetical protein	NA	NA	NA	NA
WP_018782435.1\|2421178_2422249_-	nitric oxide synthase oxygenase	NA	NA	NA	NA
WP_018782436.1\|2422600_2423470_-	NAD(P)H-binding protein	NA	NA	NA	NA
WP_006096751.1\|2423602_2424193_-	transporter	NA	NA	NA	NA
WP_018782437.1\|2424671_2425085_+	hypothetical protein	NA	NA	NA	NA
WP_018782438.1\|2425259_2425907_-	hemolysin III family protein	NA	NA	NA	NA
WP_018782439.1\|2426061_2426622_+	DUF1836 domain-containing protein	NA	NA	NA	NA
WP_144569328.1\|2426698_2426845_+\|transposase	transposase	NA	NA	NA	NA
WP_018782441.1\|2427490_2428105_-	hypothetical protein	NA	NA	NA	NA
WP_018764839.1\|2428094_2428646_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_018782442.1\|2428754_2430200_-	DEAD/DEAH box helicase	A0A1B1IS59	uncultured_Mediterranean_phage	1.0e-56	33.6
WP_018782443.1\|2430636_2431899_-	hypothetical protein	NA	NA	NA	NA
WP_029427504.1\|2432336_2433626_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA
WP_018782446.1\|2433746_2434445_-	response regulator	NA	NA	NA	NA
WP_018782447.1\|2434434_2436036_-	sensor histidine kinase	NA	NA	NA	NA
WP_006096762.1\|2436123_2437197_+	DctP family TRAP transporter solute-binding subunit	NA	NA	NA	NA
WP_018782448.1\|2437495_2438479_+	GMP reductase	G3MBI2	Bacillus_virus	2.4e-158	85.0
WP_018782449.1\|2438575_2439454_-	radical SAM protein	NA	NA	NA	NA
WP_003209320.1\|2439806_2440286_-	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA
2440325:2440343	attL	NA	NA	NA	NA
WP_026008486.1\|2440345_2440531_-	CxxH/CxxC protein	NA	NA	NA	NA
WP_018782450.1\|2440586_2441771_-\|protease	serine protease	W5SAB9	Pithovirus	3.9e-09	30.8
WP_003202558.1\|2441834_2442629_-	MBL fold metallo-hydrolase	A0A0C5AJ83	Bacteriophage	2.1e-43	36.9
WP_018782451.1\|2442635_2443463_-	hypothetical protein	NA	NA	NA	NA
WP_018782452.1\|2443443_2444787_-	hypothetical protein	NA	NA	NA	NA
WP_003202552.1\|2444783_2446619_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	1.0e-37	35.0
WP_000971870.1\|2446622_2447330_-	cell wall metabolism DNA-binding response regulator WalR	W8CYM9	Bacillus_phage	3.4e-45	43.1
WP_003202567.1\|2448142_2449432_-	adenylosuccinate synthase	A0A160ER07	Powai_lake_megavirus	5.1e-71	36.8
WP_006096771.1\|2449648_2451010_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.3e-122	52.8
WP_018764827.1\|2451037_2451484_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_018764826.1\|2451480_2453454_-	DHH family phosphoesterase	NA	NA	NA	NA
WP_003202592.1\|2453606_2454545_-	YybS family protein	NA	NA	NA	NA
WP_000918874.1\|2454625_2454859_-	30S ribosomal protein S18	NA	NA	NA	NA
WP_016112819.1\|2454904_2455417_-	single-stranded DNA-binding protein	A0A290GHL8	Caldibacillus_phage	2.7e-52	64.1
WP_003209337.1\|2455444_2455735_-	30S ribosomal protein S6	NA	NA	NA	NA
WP_006096782.1\|2455927_2457028_-	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_018782453.1\|2457143_2457341_-	DUF951 domain-containing protein	NA	NA	NA	NA
WP_003202583.1\|2457361_2458243_-	mechanosensitive ion channel family protein	NA	NA	NA	NA
WP_018782454.1\|2458515_2459112_+\|protease	spore protease YyaC	G3M9W0	Bacillus_virus	5.8e-22	38.2
WP_018782455.1\|2459132_2459984_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.8e-17	34.6
WP_003202576.1\|2459976_2460738_-	sporulation initiation inhibitor protein Soj	Q8JL10	Natrialba_phage	4.7e-24	30.1
WP_003209340.1\|2460927_2461800_-	nucleoid occlusion protein	S5VTK0	Leptospira_phage	2.4e-16	45.0
WP_006096787.1\|2461905_2462625_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA
WP_018782456.1\|2462646_2464536_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	NA	NA	NA	NA
WP_003202594.1\|2464581_2465958_-\|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	NA	NA	NA	NA
WP_018764823.1\|2466194_2466812_-	protein jag	NA	NA	NA	NA
WP_018782457.1\|2466808_2467576_-\|integrase	YidC family membrane integrase SpoIIIJ	NA	NA	NA	NA
2470183:2470201	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2714744 : 2722745

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000917305.1\|2714744_2715029_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	8.9e-21	54.8
WP_006093172.1\|2715066_2716701_+	chaperonin GroEL	A0A219YK78	uncultured_virus	3.8e-156	57.8
WP_050774399.1\|2717070_2718669_+	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	2.3e-20	31.2
WP_003194563.1\|2719062_2720388_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	4.4e-46	31.4
WP_016117050.1\|2720530_2721232_+	response regulator transcription factor	W8CYM9	Bacillus_phage	6.2e-39	36.4
WP_040119628.1\|2721227_2722745_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.5e-34	32.6

DBSCAN-SWA_5

3375888 : 3385584

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040119204.1\|3375888_3378327_+	DEAD/DEAH box helicase family protein	A0A0K2CZF8	Paenibacillus_phage	4.3e-39	28.5
WP_040119646.1\|3378514_3378781_+	hypothetical protein	NA	NA	NA	NA
WP_040119205.1\|3378935_3379586_-	2OG-Fe(II) oxygenase	M1GXR2	Acanthocystis_turfacea_Chlorella_virus	9.8e-15	30.5
WP_040119206.1\|3380033_3380894_+	DnaD domain protein	A6M985	Geobacillus_virus	1.7e-46	38.6
WP_040119207.1\|3380890_3382177_+	replicative DNA helicase	D2XR44	Bacillus_phage	4.9e-143	59.6
WP_040119208.1\|3382872_3383811_+	hypothetical protein	A0A0K2D0C0	Bacillus_phage	6.3e-79	53.8
WP_040119209.1\|3384042_3385584_-	hypothetical protein	J9Q9X0	Bacillus_phage	9.5e-24	32.3

DBSCAN-SWA_6

3824813 : 3832225

Bacillus_phage(66.67%)

integrase

attL 3823079:3823093|attR 3836076:3836090

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3823079:3823093	attL	NA	NA	NA	NA
WP_006094051.1\|3824813_3825554_+	phage repressor protein/antirepressor Ant	A0A2K9V3K3	Faecalibacterium_phage	6.5e-31	37.3
WP_018781085.1\|3825649_3826327_+	hypothetical protein	NA	NA	NA	NA
WP_018781084.1\|3826402_3827089_+	hypothetical protein	A0A2P1JUI8	Bacillus_phage	1.2e-39	52.7
WP_006094060.1\|3827102_3827765_+	hypothetical protein	A0A1S5QTJ5	Bacillus_phage	2.7e-20	32.2
WP_018781080.1\|3828348_3829443_+	hypothetical protein	A0A2H4J8G3	uncultured_Caudovirales_phage	2.7e-89	46.9
WP_006094065.1\|3830364_3831147_-	transcriptional regulator	J9PRI8	Bacillus_phage	1.0e-10	26.5
WP_006094066.1\|3831304_3832225_-\|integrase	tyrosine-type recombinase/integrase	A0A142F1N9	Bacillus_phage	8.7e-25	27.3
3836076:3836090	attR	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007624

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP007625

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP007626

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection