CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009258	Listeria monocytogenes strain Lm60 chromosome, complete genome	4 crisprs	cas3,DEDDh,casR,WYL,DinG,csa3	3	10	205	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009258_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009258_1

1530802-1531279

Orphan

I-A

Consensus_repeat	Method
ATTTACATTTCACAATAAGTAACTAAAA	PILER-CR
ATTTACATTTCACAATAAGTAACTAAAA	CRISPRCasFinder
ATTTACATTTCACAATAAGTAACTAAAAC	CRT

7 spacers

The CRISPR arrays of NZ_CP009258_1

>merge|NZ_CP009258|1|1530802-1531279|PILER-CR,CRISPRCasFinder,CRT
ATTTACATTTCACAATAAGTAACTAAAACGAAATTGTAAAATCTATATCCGTTGATTCAACAAAATTTACATTTCACAATAAGTAACTAAAACTTAATTTGATAGTCATAATTTATTTCCTCCTATTTTATTTACATTTCACAATAAGTAACTAAAATATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAGATTTACATTTCACAATAAGTAACTAAAACTTATAAACGACATTTTAGAAGCAGGAGTAGAAAAATTTACATTTCACAATAAGTAACTAAAACTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGCATTTACATTTCACAATAAGTAACTAAAACGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCAATTTACATTTCACAATAAGTAACTAAAACGCCATTTACAATCACCCTTCCGGAGTTTGATCTGTATTTACATTTCACAATAAGTAACTAAAAC

>NZ_CP009258|1|1|1530802-1531278|PILER-CR
ATTTACATTTCACAATAAGTAACTAAAA	CGAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAA	TATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAA	CTTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAA	CGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAA	CGCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAA

>NZ_CP009258|1|1|1530802-1531278|CRISPRCasFinder
ATTTACATTTCACAATAAGTAACTAAAA	CGAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAA	TATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAA	CTTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAA	CTTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAA	CGCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAA	CGCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAA

>NZ_CP009258|1|1|1530802-1531279|CRT
ATTTACATTTCACAATAAGTAACTAAAAC	GAAATTGTAAAATCTATATCCGTTGATTCAACAAA
ATTTACATTTCACAATAAGTAACTAAAAC	TTAATTTGATAGTCATAATTTATTTCCTCCTATTTT
ATTTACATTTCACAATAAGTAACTAAAAT	ATAGAAAGGAGTTGATACAGTGAAGGATGTTTTAG
ATTTACATTTCACAATAAGTAACTAAAAC	TTATAAACGACATTTTAGAAGCAGGAGTAGAAAA
ATTTACATTTCACAATAAGTAACTAAAAC	TTGTAACCCATCGCTGTCCCTTTGACAAAAATCGC
ATTTACATTTCACAATAAGTAACTAAAAC	GCTACATGCTTGATGTGCTTTACACAAAAGAGAGCA
ATTTACATTTCACAATAAGTAACTAAAAC	GCCATTTACAATCACCCTTCCGGAGTTTGATCTGT
ATTTACATTTCACAATAAGTAACTAAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009258.1\|WP_012951244.1\|1536800_1537403_-\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|223865
NZ_CP009258.1\|WP_003721297.1\|1529044_1529725_-\|type-1-glutamine-amidotransferase	unknown	unknown	gnl\|CDD\|153212
NZ_CP009258.1\|WP_003721301.1\|1525446_1525878_-\|universal-stress-protein	unknown	unknown	gnl\|CDD\|366180
NZ_CP009258.1\|WP_003721290.1\|1535890_1536289_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009258.1\|WP_003733191.1\|1536305_1536773_-\|PTS-sugar-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|238129
NZ_CP009258.1\|WP_012951250.1\|1525978_1527814_-\|lmo0514-family-class-1-internalin	unknown	unknown	gnl\|CDD\|380190
NZ_CP009258.1\|WP_012951245.1\|1535229_1535880_-\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|223114
NZ_CP009258.1\|WP_003733190.1\|1531516_1532452_-\|ribose-phosphate-pyrophosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP009258.1\|WP_003733193.1\|1537406_1539467_-\|BglG-family-transcription-antiterminator	unknown	unknown	gnl\|CDD\|226234
NZ_CP009258.1\|WP_012951251.1\|1523969_1525400_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|225399
NZ_CP009258.1\|WP_012951246.1\|1534186_1535233_-\|galactitol-1-phosphate-5-dehydrogenase	unknown	unknown	gnl\|CDD\|176198
NZ_CP009258.1\|WP_003727295.1\|1520822_1522238_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP009258.1\|WP_014601718.1\|1528660_1529020_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|131113
NZ_CP009258.1\|WP_012951252.1\|1522384_1522753_+\|DUF1304-domain-containing-protein	unknown	unknown	gnl\|CDD\|226282
NZ_CP009258.1\|WP_012951247.1\|1529831_1530410_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009258.1\|WP_003721293.1\|1533877_1534171_-\|PTS-sugar-transporter-subunit-IIB	unknown	unknown	gnl\|CDD\|99908
NZ_CP009258.1\|WP_003733187.1\|1528195_1528654_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378956
NZ_CP009258.1\|WP_003721303.1\|1523033_1523849_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|223483
NZ_CP009258.1\|WP_003721294.1\|1532591_1533863_-\|PTS-galactitol-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|226298
NZ_CP009258.1\|WP_012951243.1\|1539575_1540226_-\|transaldolase	unknown	unknown	gnl\|CDD\|223254

Protein	Function_ID	Function_description	E-value
NZ_CP009258.1\|WP_012951244.1\|1536800_1537403_-\|SIS-domain-containing-protein	gnl\|CDD\|223865	COG0794, GutQ, Predicted sugar phosphate isomerase involved in capsule formation [Cell envelope biogenesis, outer membrane].	5.57544e-75
NZ_CP009258.1\|WP_003721297.1\|1529044_1529725_-\|type-1-glutamine-amidotransferase	gnl\|CDD\|153212	cd01741, GATase1_1, Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine amidotransferases, or as domains in a much larger multifunctional synthase protein, such as CPSase.	7.71833e-60
NZ_CP009258.1\|WP_003721301.1\|1525446_1525878_-\|universal-stress-protein	gnl\|CDD\|366180	pfam00582, Usp, Universal stress protein family. The universal stress protein UspA is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, though UspA lacks ATP-binding activity.	4.03126e-27
NZ_CP009258.1\|WP_003733191.1\|1536305_1536773_-\|PTS-sugar-transporter-subunit-IIA	gnl\|CDD\|238129	cd00211, PTS_IIA_fru, PTS_IIA, PTS system, fructose/mannitol specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation.	2.76446e-37
NZ_CP009258.1\|WP_012951250.1\|1525978_1527814_-\|lmo0514-family-class-1-internalin	gnl\|CDD\|380190	NF033186, internalin_K, class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.	8.58129e-120
NZ_CP009258.1\|WP_012951245.1\|1535229_1535880_-\|ribulose-phosphate-3-epimerase	gnl\|CDD\|223114	COG0036, Rpe, Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism].	8.25352e-108
NZ_CP009258.1\|WP_003733190.1\|1531516_1532452_-\|ribose-phosphate-pyrophosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	1.26262e-153
NZ_CP009258.1\|WP_003733193.1\|1537406_1539467_-\|BglG-family-transcription-antiterminator	gnl\|CDD\|226234	COG3711, BglG, Transcriptional antiterminator [Transcription].	3.95572e-80
NZ_CP009258.1\|WP_012951251.1\|1523969_1525400_+\|CapA-family-protein	gnl\|CDD\|225399	COG2843, PgsA, Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane].	7.01384e-100
NZ_CP009258.1\|WP_012951246.1\|1534186_1535233_-\|galactitol-1-phosphate-5-dehydrogenase	gnl\|CDD\|176198	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex.	0
NZ_CP009258.1\|WP_003727295.1\|1520822_1522238_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	3.97112e-80
NZ_CP009258.1\|WP_014601718.1\|1528660_1529020_+\|hypothetical-protein	gnl\|CDD\|131113	TIGR02058, lin0512_fam, conserved hypothetical protein. This family consists of few members, broadly distributed. It occurs so far in several Firmicutes (twice in Oceanobacillus), one Cyanobacterium, one alpha Proteobacterium, and (with a long prefix) in plants. The function is unknown. The alignment includes a perfectly conserved motif GxGxDxHG near the N-terminus. [Hypothetical proteins, Conserved].	4.36834e-66
NZ_CP009258.1\|WP_012951252.1\|1522384_1522753_+\|DUF1304-domain-containing-protein	gnl\|CDD\|226282	COG3759, COG3759, Predicted membrane protein [Function unknown].	8.73125e-42
NZ_CP009258.1\|WP_003721293.1\|1533877_1534171_-\|PTS-sugar-transporter-subunit-IIB	gnl\|CDD\|99908	cd05566, PTS_IIB_galactitol, PTS_IIB_galactitol: subunit IIB of enzyme II (EII) of the galactitol-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS). In this system, EII is a galactitol-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain that are expressed on three distinct polypeptide chains, in contrast to other PTS sugar transporters. The three genes encoding these subunits (gatA, gatB, and gatC) comprise the gatCBA operon. Galactitol PTS permease takes up exogenous galactitol, releasing the phosphate ester into the cytoplasm in preparation for oxidation and further metabolism via a modified glycolytic pathway called the tagatose-6-phosphate glycolytic pathway. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include galactitol, chitobiose/lichenan, ascorbate, lactose, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.	3.06007e-27
NZ_CP009258.1\|WP_003733187.1\|1528195_1528654_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|378956	pfam12802, MarR_2, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. The expression of the mar operon is controlled by a repressor, MarR. A large number of compounds induce transcription of the mar operon. This is thought to be due to the compound binding to MarR, and the resulting complex stops MarR binding to the DNA. With the MarR repression lost, transcription of the operon proceeds. The structure of MarR is known and shows MarR as a dimer with each subunit containing a winged-helix DNA binding motif.	1.03599e-12
NZ_CP009258.1\|WP_003721303.1\|1523033_1523849_+\|histidine-phosphatase-family-protein	gnl\|CDD\|223483	COG0406, phoE, Broad specificity phosphatase PhoE and related phosphatases [General function prediction only].	5.01016e-50
NZ_CP009258.1\|WP_003721294.1\|1532591_1533863_-\|PTS-galactitol-transporter-subunit-IIC	gnl\|CDD\|226298	COG3775, GatC, Phosphotransferase system, galactitol-specific IIC component [Carbohydrate transport and metabolism].	7.01085e-178
NZ_CP009258.1\|WP_012951243.1\|1539575_1540226_-\|transaldolase	gnl\|CDD\|223254	COG0176, MipB, Transaldolase [Carbohydrate transport and metabolism].	1.0547e-61

>NZ_CP009258.1|WP_012951247.1|1529831_1530410_-|hypothetical-protein
MKKILVPILLLATILASCSSPNEKITKDTKISKTNTIRADYKVPKDIKELEDDSANIVKVKFLQNKTIGKDGSTISEIEILTSYKGNLEKGSKVDISEPWYLSDGKYVAVENYIALDKEQEYTIFLGEKDKDTYPLSSLGYGKFGGSLKEDQAVLADFNILGEVQKFDFISENTEEVKNYQLIKEQVAGKYK
>NZ_CP009258.1|WP_003721297.1|1529044_1529725_-|type-1-glutamine-amidotransferase
MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDSDFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITVNKEKEVGWFPVKRTSDKLLFFPESLNVFHWHQDTFALPTGSTRLFASEGCLNQAFLYGENIIGLQFHFEMEKAGIETILRIDEAFITPGKYVQSVEVMREKDVPEDNKQMLEAILDYLINPKTI
>NZ_CP009258.1|WP_014601718.1|1528660_1529020_+|hypothetical-protein
MEQILFIQTGFGVDVHGQNITNAAERAVRNAIFTNSMPGIQGLLPDGDLQNMVVNIKLALPCDADQLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKEDKNDLMYIVNASVETGY
>NZ_CP009258.1|WP_003733187.1|1528195_1528654_+|MarR-family-transcriptional-regulator
MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFFTARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTAAGKELENELGAAQRKQMSEIFTNSADTDGMHFTEVMEGYAKNRPGAAFIKDFKE
>NZ_CP009258.1|WP_012951250.1|1525978_1527814_-|lmo0514-family-class-1-internalin
MKKALKLFLATICMFIMIYPSTAAHAEETNIVNIPDANLKTYLNGLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIKNQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSISGSEVTHNVFKTFNKLPKLTYLYAQNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRTNPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVALPSSRLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMTSYTISSGTYDQYFDISHTLDLTADESFDYNQYDTTSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVPGEYTVTLNAENAAGLKATPVTVKVTVHEKPVITSDSQISYKKETTKSVDEFLKEIHGSVTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDSGHVDPVPPTPEIKPTPQEETDQTIIPEPQSETTEDSVKEDQAKDGQAKSEEKADKTSLTTKENKVEKSEKTNQPKTKALPQTGDTNKTALPIAGVMLSLAALLIFRKSKS
>NZ_CP009258.1|WP_003721301.1|1525446_1525878_-|universal-stress-protein
MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLRAFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPAEFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR
>NZ_CP009258.1|WP_012951251.1|1523969_1525400_+|CapA-family-protein
MKKLTYVIITGLVLVFIAGAFWITNSTNQSDQKATQTEPIKKISPANVKTISSEAKKTLNSLASSGADKASISDLKQLIKELKSYPTEKNDSGVYLQNLTACLEAVKSYTTGKTDEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKGVVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTVINAESAFTNATKAENKKWRIKSDPAHVAFLPASGVDAANLANNHTMDYFQVGYDDTLKAFKENNIPVFNADAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKEDTLVIVNMHWGVEYRETPTDYQTQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFGADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAKKIVDELNRISKPIEGGVTEYTYFDPF
>NZ_CP009258.1|WP_003721303.1|1523033_1523849_+|histidine-phosphatase-family-protein
MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTANLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGLSPKDFANSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSHGLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK
>NZ_CP009258.1|WP_012951252.1|1522384_1522753_+|DUF1304-domain-containing-protein
MAILAFILTFIVMIEHIYIMILEMFFANTKLAAKTFGVEKELLANKKVQTLFANQGLYNGFLAAGLVWGLFFAGAGMAETVQIFFLSCVVVAALFGGATSSKGILVKQGLPAVLALVAVLLV
>NZ_CP009258.1|WP_003727295.1|1520822_1522238_-|multidrug-efflux-MFS-transporter
MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQVFDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPTFAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISGLILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVFAFSSAGESGWGSATVLVSIIVGGLALGLFVWRQLTMEKPLMDLKVFKYPMFTLGLILVFISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRALVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKLYPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGVGPEQMVASLTAGIQNAFVFGLIMACIGLLCSLFIRKAK
>NZ_CP009258.1|WP_003733190.1|1531516_1532452_-|ribose-phosphate-pyrophosphokinase
MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKINIEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKARSREPITAKLMANLIQRAGANRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENYGEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVVDDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSNIKEVITSDSIDLPEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF
>NZ_CP009258.1|WP_003721294.1|1532591_1533863_-|PTS-galactitol-transporter-subunit-IIC
MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLTVGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVFVAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAVLSSIINMAIIFKIADWTQKDVEDVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQSRLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVISEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFILPGNKVLPLADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIPKDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL
>NZ_CP009258.1|WP_003721293.1|1533877_1534171_-|PTS-sugar-transporter-subunit-IIB
MKKKRIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQEVASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQETIDEILAILQD
>NZ_CP009258.1|WP_012951246.1|1534186_1535233_-|galactitol-1-phosphate-5-dehydrogenase
MKALKLYGKRDLRYEEADMPTIEEPDDVILKVKTVGICGSDISRYSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFARCRKLTVIGARHPGAYAEYIKLPAENVVKIPDELDYEAAALVEPSAVVVHGFYHTKLQAGDDVVVVGSGNIGLLAIQWAKVFGARRVIAIDVDDKKLALAKEVGADVVINSLKEDPLEVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKIVRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIYERNEFFGKILFFPE
>NZ_CP009258.1|WP_012951245.1|1535229_1535880_-|ribulose-phosphate-3-epimerase
MAKIVPSVFGADIGRINEQLQVLEKNDIDLLHVDMMDGSFVPNIAFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQLIKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKAYIGNRPIQIEVDGGVNAELAKECTLAGADLIVVGSYLFEGDIEANLEKLAKGVLTE
>NZ_CP009258.1|WP_003721290.1|1535890_1536289_-|hypothetical-protein
MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMVVVMIYATTILYAKWTLAYYLPKKMSQLAEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNAPESTKLLHFSQQKLKLSDKEKLQKIIEIQS
>NZ_CP009258.1|WP_003733191.1|1536305_1536773_-|PTS-sugar-transporter-subunit-IIA
MDVLEYFKEEMVRFSNEQNKEKLLAEMAEQLCEVGAVKPSYKDAVIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVRIVFMMALRSADEQLDMLQTLIQLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN
>NZ_CP009258.1|WP_012951244.1|1536800_1537403_-|SIS-domain-containing-protein
MDKQAILNNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVYSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK
>NZ_CP009258.1|WP_003733193.1|1537406_1539467_-|BglG-family-transcription-antiterminator
MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVNEWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLTSKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKVLTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYLLSVMFLRIRDRRLIDTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLTTNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIKYQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQNDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFSSIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKDPNAIRDGIIDILSANTATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPLLLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYFSETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLENVTKEKIMQTINQLVIREDE
>NZ_CP009258.1|WP_012951243.1|1539575_1540226_-|transaldolase
MHLDSANLDDVKKIQASSIFKGITTNPTILVKEKCNRQTAINRILELTDKQVFVQTVGFTYEEILADARMLLTMFGKDKIAIKIPAHEAGTNVIDTLKKEDKTIQILGTAIYSADQAITAALVGADFVAPYVNRMSAANIDPFKEIRQMRHFFDKKALKTQIMAASFKHSGQVMQAYESGADTVTIPYEIYLQMTNKVLAVEAIRVFNEDAVLYEK

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Crispr_ID: NZ_CP009258_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009258_2

1839182-1839333

Unclear

Consensus_repeat	Method
GAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGG	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP009258_2

>merge|NZ_CP009258|2|1839182-1839333|CRISPRCasFinder
GAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGGCGTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAATTCGAATGAGCTCGGTTCTGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGG

>NZ_CP009258|2|2|1839182-1839333|CRISPRCasFinder
GAGCTCGGTTCCGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGG	CGTCTCTGGCAAAGCAAGTCTTAACTCTTCATCCGTAGGTGGTGGTGGAAATTCGAAT
GAGCTCGGTTCTGATGTAGCAGGAGCATTAAAACCAAGAAGCATTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009258.1\|WP_003722726.1\|1848815_1849124_-\|septation-protein-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_CP009258.1\|WP_003722740.1\|1833301_1833925_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	unknown	unknown	gnl\|CDD\|235534
NZ_CP009258.1\|WP_012952051.1\|1832627_1833212_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP009258.1\|WP_003722727.1\|1847055_1848429_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	unknown	unknown	gnl\|CDD\|184643
NZ_CP009258.1\|WP_003722723.1\|1851440_1852133_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP009258.1\|WP_003725735.1\|1835977_1836310_+\|putative-heavy-metal-binding-protein	unknown	unknown	gnl\|CDD\|179228
NZ_CP009258.1\|WP_009930499.1\|1835236_1835911_+\|DNA-alkylation-repair-protein	unknown	unknown	gnl\|CDD\|378033
NZ_CP009258.1\|WP_003722729.1\|1845292_1846006_+\|listeriolysin-transcriptional-regulator-PrfA	unknown	unknown	gnl\|CDD\|223736
NZ_CP009258.1\|WP_003722742.1\|1831960_1832521_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|235457
NZ_CP009258.1\|WP_012952056.1\|1844068_1845022_+\|phosphatidylinositol-specific-phospholipase-C	unknown	unknown	gnl\|CDD\|176497
NZ_CP009258.1\|WP_003722728.1\|1846048_1847005_-\|ribose-phosphate-diphosphokinase	unknown	unknown	gnl\|CDD\|234929
NZ_CP009258.1\|WP_012952055.1\|1840374_1841907_-\|zinc-metalloproteinase-Mpl	unknown	unknown	gnl\|CDD\|225768
NZ_CP009258.1\|WP_009931069.1\|1850235_1851444_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|182528
NZ_CP009258.1\|WP_003722731.1\|1842237_1843827_-\|cholesterol-dependent-cytolysin-listeriolysin-O	unknown	unknown	gnl\|CDD\|366559
NZ_CP009258.1\|WP_003722735.1\|1836956_1837280_-\|DUF5502-family-protein	unknown	unknown	gnl\|CDD\|340321
NZ_CP009258.1\|WP_012952052.1\|1836360_1836822_-\|YehR-family-lipoprotein	unknown	unknown	gnl\|CDD\|227145
NZ_CP009258.1\|WP_003722739.1\|1834218_1835160_+\|L-lactate-dehydrogenase	unknown	unknown	gnl\|CDD\|178836
NZ_CP009258.1\|WP_012952053.1\|1837351_1838221_-\|phosphatidylcholine-phospholipase-C	unknown	unknown	gnl\|CDD\|214813
NZ_CP009258.1\|WP_003722725.1\|1849243_1849552_-\|septation-protein-SpoVG	unknown	unknown	gnl\|CDD\|237321
NZ_CP009258.1\|WP_010989376.1\|1828306_1831846_-\|transcription-repair-coupling-factor	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|224118

Protein	Function_ID	Function_description	E-value
NZ_CP009258.1\|WP_003722726.1\|1848815_1849124_-\|septation-protein-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	5.03804e-54
NZ_CP009258.1\|WP_003722740.1\|1833301_1833925_-\|50S-ribosomal-protein-L25/general-stress-protein-Ctc	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	2.38585e-63
NZ_CP009258.1\|WP_012952051.1\|1832627_1833212_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.33654e-10
NZ_CP009258.1\|WP_003722727.1\|1847055_1848429_-\|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU	gnl\|CDD\|184643	PRK14354, glmU, bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU.	0
NZ_CP009258.1\|WP_003722723.1\|1851440_1852133_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	7.27113e-121
NZ_CP009258.1\|WP_003725735.1\|1835977_1836310_+\|putative-heavy-metal-binding-protein	gnl\|CDD\|179228	PRK01119, PRK01119, putative heavy metal-binding protein.	8.98192e-61
NZ_CP009258.1\|WP_009930499.1\|1835236_1835911_+\|DNA-alkylation-repair-protein	gnl\|CDD\|378033	pfam08713, DNA_alkylation, DNA alkylation repair enzyme. Proteins in this family are predicted to be DNA alkylation repair enzymes. The structure of a hypothetical protein in this family shows it to adopt a supercoiled alpha helical structure.	1.81561e-21
NZ_CP009258.1\|WP_003722729.1\|1845292_1846006_+\|listeriolysin-transcriptional-regulator-PrfA	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	9.59942e-12
NZ_CP009258.1\|WP_003722742.1\|1831960_1832521_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|235457	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional.	4.98809e-109
NZ_CP009258.1\|WP_012952056.1\|1844068_1845022_+\|phosphatidylinositol-specific-phospholipase-C	gnl\|CDD\|176497	cd00137, PI-PLCc, Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated PI-analogues, PIP2 and PIP, to generate two important second messengers, InsP3 and DAG. InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. In contrast, bacterial PI-PLCs contain a single catalytic domain. Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. They participate in Ca2+-independent PI metabolism. They are characterized as phosphatidylinositol-specific phospholipase C (EC 4.6.1.13) that selectively hydrolyze PI, not PIP or PIP2. The TIM-barrel type catalytic domain in bacterial PI-PLCs is very similar to the one in eukaryotic PI-PLCs, in which the catalytic domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. The catalytic mechanism of both prokaryotic and eukaryotic PI-PLCs is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This superfamily also includes a distinctly different type of eukaryotic PLC, glycosylphosphatidylinositol-specific phospholipase C (GPI-PLC), an integral membrane protein characterized in the protozoan parasite Trypanosoma brucei. T. brucei GPI-PLC hydrolyzes the GPI-anchor on the variant specific glycoprotein (VSG), releasing dimyristyl glycerol (DMG), which may facilitate the evasion of the protozoan to the host#s immune system. It does not require Ca2+ for its activity and is more closely related to bacterial PI-PLCs, but not mammalian PI-PLCs.	6.12448e-116
NZ_CP009258.1\|WP_003722728.1\|1846048_1847005_-\|ribose-phosphate-diphosphokinase	gnl\|CDD\|234929	PRK01259, PRK01259, ribose-phosphate diphosphokinase.	0
NZ_CP009258.1\|WP_012952055.1\|1840374_1841907_-\|zinc-metalloproteinase-Mpl	gnl\|CDD\|225768	COG3227, LasB, Zinc metalloprotease (elastase) [Amino acid transport and metabolism].	9.42667e-139
NZ_CP009258.1\|WP_009931069.1\|1850235_1851444_-\|FtsX-like-permease-family-protein	gnl\|CDD\|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	2.47504e-62
NZ_CP009258.1\|WP_003722731.1\|1842237_1843827_-\|cholesterol-dependent-cytolysin-listeriolysin-O	gnl\|CDD\|366559	pfam01289, Thiol_cytolysin, Thiol-activated cytolysin.	1.50399e-178
NZ_CP009258.1\|WP_003722735.1\|1836956_1837280_-\|DUF5502-family-protein	gnl\|CDD\|340321	pfam17606, DUF5502, Family of unknown function (DUF5502). This is a family of unknown function found in Listeria.	5.76244e-49
NZ_CP009258.1\|WP_012952052.1\|1836360_1836822_-\|YehR-family-lipoprotein	gnl\|CDD\|227145	COG4808, COG4808, Uncharacterized protein conserved in bacteria [Function unknown].	1.58576e-57
NZ_CP009258.1\|WP_003722739.1\|1834218_1835160_+\|L-lactate-dehydrogenase	gnl\|CDD\|178836	PRK00066, ldh, L-lactate dehydrogenase; Reviewed.	0
NZ_CP009258.1\|WP_012952053.1\|1837351_1838221_-\|phosphatidylcholine-phospholipase-C	gnl\|CDD\|214813	smart00770, Zn_dep_PLPC, Zinc dependent phospholipase C (alpha toxin). This domain conveys a zinc dependent phospholipase C activity (EC 3.1.4.3). It is found in a monomeric phospholipase C of Bacillus cereus as well as in the alpha toxin of Clostridium perfringens and Clostridium bifermentans, which is involved in haemolysis and cell rupture. It is also found in a lecithinase of Listeria monocytogenes, which is involved in breaking the 2-membrane vacuoles that surround the bacterium. Structure information: PDB 1ca1.	7.07052e-87
NZ_CP009258.1\|WP_003722725.1\|1849243_1849552_-\|septation-protein-SpoVG	gnl\|CDD\|237321	PRK13259, PRK13259, septation regulator SpoVG.	2.92652e-53
NZ_CP009258.1\|WP_010989376.1\|1828306_1831846_-\|transcription-repair-coupling-factor	gnl\|CDD\|224118	COG1197, Mfd, Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription].	0

>NZ_CP009258.1|WP_012952053.1|1837351_1838221_-|phosphatidylcholine-phospholipase-C
MKFKKVVLGMCLTASVLVFPVTIKANACCDEYLQTPAAPHDIDSKLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVNHMRANLMNELKKFDKQIAQGIYDADHKNPYYDTSTFLSHFYNPDRDNTYLPGFANAKITGAKYFNQSVTDYREGKFDTAFYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVAKRFCSDDVKDWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVKPTGARLRDSQQTLAGFLEFWSKKTNE
>NZ_CP009258.1|WP_003722735.1|1836956_1837280_-|DUF5502-family-protein
MYIKGRLIFFFVMFVIALCSVLILLIIKISVWKDEPFHLSDAKEIECLGSCEIKNTNQKIHFFSIKENLFEEKGDIAGILNEDEQKVADKSIFIVILDDEKGIANEE
>NZ_CP009258.1|WP_012952052.1|1836360_1836822_-|YehR-family-lipoprotein
MKMLKKGTAVLFVMIMAVMLVACGDKEETKTYTLSQKGVDSKLTYTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKAIETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK
>NZ_CP009258.1|WP_003725735.1|1835977_1836310_+|putative-heavy-metal-binding-protein
MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFGGRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTAVVIEAQDY
>NZ_CP009258.1|WP_009930499.1|1835236_1835911_+|DNA-alkylation-repair-protein
MITFDQLDTELQALENPNTIKIFRNHGCPDSLDLYGLKIGDLKKIIRREKLTKNHELAVKLIESNNSDLIYLGLLAINPNKITTEQIEKWNIAFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNLPEAETLLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLGNTACKVPDAISYIEKARNRTK
>NZ_CP009258.1|WP_003722739.1|1834218_1835160_+|L-lactate-dehydrogenase
MKDHQKIILVGDGAVGSSYAFACVNLSIGQEFGIIDIDKDRTIGDAMDLSHAVPFSTPKKIYSANYSDCHDADLVVVTAGTAQKPGETRLDLVNRNIKIMKGIVDEVMASGFDGIFLIASNPVDILTYATWKFSGLPKERVIGSGTSLDTARFRMSIADYLKVDARNVHGYILGEHGDTEFPAWSHTTVGGLPITEWISEDEQGAMDTIFVSVRDAAYEIINKKGATFYGVAAALARITKAILNNENAILPLSVYLDGHYGMNDIYIGAPAVVNRQGVRHIVEMNLNDKEKEQMKNSADTLKKVLDDAMKQID
>NZ_CP009258.1|WP_003722740.1|1833301_1833925_-|50S-ribosomal-protein-L25/general-stress-protein-Ctc
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
>NZ_CP009258.1|WP_012952051.1|1832627_1833212_-|GNAT-family-N-acetyltransferase
MLDKSVPHISVIMVNHDATNYPEFHLPAGYFFCFYKDGLEEDWCRLQLETGQVLSMDSIRARFETEFGNEKEKLTKRCIFVKAPNGEIIGTAMLWDGNTFGKMESRIHWVAVLDSHGGKGIAKALLSKILGLNKSKFVYLTTQTGSYQAIYLYRKFGFEKYVGKTPENWKTVNFQEEKETAWQIIENKIAEHQA
>NZ_CP009258.1|WP_003722742.1|1831960_1832521_-|aminoacyl-tRNA-hydrolase
MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNGMTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRLRQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVINYVLGDFPKAEQPDIIAAIQKSADAIEDFAQTPFIEVMNKYNQK
>NZ_CP009258.1|WP_010989376.1|1828306_1831846_-|transcription-repair-coupling-factor
MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASVVEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQRVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTMGYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRVEEFRLLPATEIILDQSYYPDIVKRLEKKMMLTLNELKEQEDKQALIENLEEDLEMLRSGVKPDMFFKYIGLAYPDPASLFDYLPKNTAILLDEFGRILETEESLEREEAEWQTETLSRMETVRDVQVSHSFKKLLEGNHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQMNVLKTELESWHKNNYAVVILAPNLERAEKMQQTLTDYDMESTILKKESDVPKYGMVQFVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVVHVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRLNKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPTTILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSKDVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLSVIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAMVPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADRMGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMRDLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKPKEEQKQIVPVEIDIQADAYIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKVRALEVGIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITINVQNKPLKEWLYQVKSLAEKLRGAMKEKASTEN
>NZ_CP009258.1|WP_012952055.1|1840374_1841907_-|zinc-metalloproteinase-Mpl
MKSKLICIIMVIAFQAHFTMTVKADSVGEEKLQNNTQAKKTPADLKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSGGYLTDNDEIKVHVTPDNKITFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYVGNPVKEKEIILNSRTKRLVYNIKLIFAEPEVASWIVQVDVETGAILKKQNMLSEVERADTHKDFQALGKGANRLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLKHNTDTSFGKVVSNKTNMFTDPEFSSAVDAHFYASEVYEYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGQEILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGEDVCVRGSRDGRIRSIKDPDKYNQAAHMKDYESLPITEEGDWGGVHYNSGIPNKAAYNTITKLGKEKTEQLYFRALKYYLTKKSQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVGVN
>NZ_CP009258.1|WP_003722731.1|1842237_1843827_-|cholesterol-dependent-cytolysin-listeriolysin-O
MKKIMLVFITLILVSLPIAQQTEAKDASAFNKENSISSMAPPASPPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVEKKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPGMTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLIAKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTKEQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVELTNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFLKDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEVNYDPEGNEIVQHKNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRNISIWGTTLYPKYSNKVDNPIE
>NZ_CP009258.1|WP_012952056.1|1844068_1845022_+|phosphatidylinositol-specific-phospholipase-C
MYKIYLRRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVTTKQWMSALPDTTNLAALSIPGTHDTMSYNGDITWTLTKPLAQTQTMSLYQQLEAGIRYIDIRAKDNLNIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYRIQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSRKFGMQFGAPNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALNNKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN
>NZ_CP009258.1|WP_003722729.1|1845292_1846006_+|listeriolysin-transcriptional-regulator-PrfA
MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDGITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINELKELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPDGIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYAPKLDEWFYLACPATWGKLN
>NZ_CP009258.1|WP_003722728.1|1846048_1847005_-|ribose-phosphate-diphosphokinase
MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDGEIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYARQDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDYFSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEGKVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVVTNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE
>NZ_CP009258.1|WP_003722727.1|1847055_1848429_-|bifunctional-UDP-N-acetylglucosamine-diphosphorylase/glucosamine-1-phosphate-N-acetyltransferase-GlmU
MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTLNVDKVVTIVGHGAEKVQEHLAGKSEFVKQDEQLGTAHAVLQAKAELAGKDGVTLVVCGDTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDATEKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRMESFEESLGVNDRIALAEASKLMQRRINENHMRNGVTLVNPESTYIDIDVKIGQDTVIEPGVMLRGKTVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRPESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNKAKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPEDALGIARAKQDNKLGYAKHLNHGK
>NZ_CP009258.1|WP_003722726.1|1848815_1849124_-|septation-protein-SpoVG
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
>NZ_CP009258.1|WP_003722725.1|1849243_1849552_-|septation-protein-SpoVG
MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLFVAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
>NZ_CP009258.1|WP_009931069.1|1850235_1851444_-|FtsX-like-permease-family-protein
MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTLTTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVISVCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASKLRPIDALRSE
>NZ_CP009258.1|WP_003722723.1|1851440_1852133_-|ABC-transporter-ATP-binding-protein
MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPSGSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKLSAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARALAGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQDGKLFHEEATQA

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Crispr_ID: NZ_CP009258_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009258_3

2214817-2214925

Orphan

Consensus_repeat	Method
TAAATCAAAATAAAGTACATTTTGAAAGTTCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009258_3

>merge|NZ_CP009258|3|2214817-2214925|CRISPRCasFinder
TAAATCAAAATAAAGTACATTTTGAAAGTTCTGGGAAGGATTAAATCATCGCTGCGCTCAGATTTATATTGAAGAACTAAATCAAAATAAAGTACATTTTGAAAGTTCT

>NZ_CP009258|3|3|2214817-2214925|CRISPRCasFinder
TAAATCAAAATAAAGTACATTTTGAAAGTTCT	GGGAAGGATTAAATCATCGCTGCGCTCAGATTTATATTGAAGAAC
TAAATCAAAATAAAGTACATTTTGAAAGTTCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009258.1\|WP_003722065.1\|2214227_2214692_+\|DUF3284-domain-containing-protein	unknown	unknown	gnl\|CDD\|378692
NZ_CP009258.1\|WP_003722061.1\|2217788_2218034_+\|YaaL-family-protein	unknown	unknown	gnl\|CDD\|378478
NZ_CP009258.1\|WP_009925039.1\|2210493_2211135_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009258.1\|WP_003728591.1\|2212304_2213669_+\|PTS-sugar-transporter-subunit-IIC	unknown	unknown	gnl\|CDD\|224372
NZ_CP009258.1\|WP_012951102.1\|2221335_2221932_-\|dihydroxyacetone-kinase-subunit-L	unknown	unknown	gnl\|CDD\|274099
NZ_CP009258.1\|WP_003722062.1\|2217177_2217774_+\|recombination-protein-RecR	unknown	unknown	gnl\|CDD\|234616
NZ_CP009258.1\|WP_003722074.1\|2206237_2207185_+\|LPXTG-cell-wall-anchor-domain-containing-protein	unknown	unknown	gnl\|CDD\|273478
NZ_CP009258.1\|WP_009931159.1\|2218079_2218922_-\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|223729
NZ_CP009258.1\|WP_003732079.1\|2221953_2222943_-\|dihydroxyacetone-kinase-subunit-DhaK	unknown	unknown	gnl\|CDD\|237724
NZ_CP009258.1\|WP_003722063.1\|2216751_2217069_+\|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl\|CDD\|234669
NZ_CP009258.1\|WP_003728590.1\|2213803_2214025_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009258.1\|WP_012951100.1\|2219042_2219882_-\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_CP009258.1\|WP_009931588.1\|2211706_2211862_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009258.1\|WP_003732084.1\|2214982_2216722_+\|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl\|CDD\|235505
NZ_CP009258.1\|WP_003732089.1\|2204357_2206097_+\|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl\|CDD\|227320
NZ_CP009258.1\|WP_003722073.1\|2207227_2208166_+\|GW-domain-containing-glycosaminoglycan-binding-protein	unknown	unknown	gnl\|CDD\|226309
NZ_CP009258.1\|WP_012951101.1\|2220000_2220852_-\|MurR/RpiR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224651
NZ_CP009258.1\|WP_003728589.1\|2214027_2214210_+\|DUF3188-domain-containing-protein	unknown	unknown	gnl\|CDD\|371501
NZ_CP009258.1\|WP_003732087.1\|2208281_2209796_+\|gluconokinase	unknown	unknown	gnl\|CDD\|212659
NZ_CP009258.1\|WP_009913205.1\|2220957_2221332_-\|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM	unknown	unknown	gnl\|CDD\|184702

Protein	Function_ID	Function_description	E-value
NZ_CP009258.1\|WP_003722061.1\|2217788_2218034_+\|YaaL-family-protein	gnl\|CDD\|378478	pfam10704, DUF2508, Protein of unknown function (DUF2508). This family is conserved in Firmicutes. Several members are annotated as being the protein YaaL. The function is not known.	2.68189e-15
NZ_CP009258.1\|WP_012951100.1\|2219042_2219882_-\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.59066e-84
NZ_CP009258.1\|WP_003728591.1\|2212304_2213669_+\|PTS-sugar-transporter-subunit-IIC	gnl\|CDD\|224372	COG1455, CelB, Phosphotransferase system cellobiose-specific component IIC [Carbohydrate transport and metabolism].	1.91509e-162
NZ_CP009258.1\|WP_012951102.1\|2221335_2221932_-\|dihydroxyacetone-kinase-subunit-L	gnl\|CDD\|274099	TIGR02365, dha_L_ycgS, dihydroxyacetone kinase, phosphoprotein-dependent, L subunit. Two types of dihydroxyacetone kinase (glycerone kinase) are described. In yeast and a few bacteria, e.g. Citrobacter freundii, the enzyme is a single chain that uses ATP as phosphoryl donor and is designated EC 2.7.1.29. By contract, E. coli and many other bacterial species have a multisubunit form (EC 2.7.1.-) with a phosphoprotein donor related to PTS transport proteins. This family represents the subunit homologous to the E. coli YcgS subunit.	1.69543e-82
NZ_CP009258.1\|WP_003722062.1\|2217177_2217774_+\|recombination-protein-RecR	gnl\|CDD\|234616	PRK00076, recR, recombination protein RecR; Reviewed.	7.77001e-132
NZ_CP009258.1\|WP_003722074.1\|2206237_2207185_+\|LPXTG-cell-wall-anchor-domain-containing-protein	gnl\|CDD\|273478	TIGR01167, Zinc_metalloprotease_ZmpB, LPXTG-motif cell wall anchor domain. This model describes the LPXTG motif-containing region found at the C-terminus of many surface proteins of Streptococcus and Streptomyces species. Cleavage between the Thr and Gly by sortase or a related enzyme leads to covalent anchoring at the new C-terminal Thr to the cell wall. Hits that do not lie at the C-terminus or are not found in Gram-positive bacteria are probably false-positive. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region. [Cell envelope, Other].	1.13667e-05
NZ_CP009258.1\|WP_009931159.1\|2218079_2218922_-\|aldo/keto-reductase	gnl\|CDD\|223729	COG0656, ARA1, Aldo/keto reductases, related to diketogulonate reductase [General function prediction only].	6.97706e-130
NZ_CP009258.1\|WP_003732079.1\|2221953_2222943_-\|dihydroxyacetone-kinase-subunit-DhaK	gnl\|CDD\|237724	PRK14481, PRK14481, dihydroxyacetone kinase subunit DhaK; Provisional.	0
NZ_CP009258.1\|WP_003722063.1\|2216751_2217069_+\|YbaB/EbfC-family-nucleoid-associated-protein	gnl\|CDD\|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	3.53269e-41
NZ_CP009258.1\|WP_003732087.1\|2208281_2209796_+\|gluconokinase	gnl\|CDD\|212659	cd07770, FGGY_GntK, Gluconate kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is composed of a group of gluconate kinases (GntK, also known as gluconokinase; EC 2.7.1.12) encoded by the gntK gene, which catalyzes the ATP-dependent phosphorylation of D-gluconate and produce 6-phospho-D-gluconate and ADP. The presence of Mg2+ might be required for catalytic activity. The prototypical member of this subfamily is GntK from Lactobacillus acidophilus. Unlike Escherichia coli GntK, which belongs to the superfamily of P-loop containing nucleoside triphosphate hydrolases, members in this subfamily are homologous to glycerol kinase, xylulose kinase, and rhamnulokinase from Escherichia coli. They have been classified as members of the FGGY family of carbohydrate kinases, which contain two large domains separated by a deep cleft that forms the active site. This model spans both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. Some uncharacterized homologous sequences are also included in this subfamily. The Lactobacillus gnt operon contains a single gntK gene. The gnt operons of some bacteria, such as Corynebacterium glutamicum, have two gntK genes. For example, the C. glutamicum gnt operon has both a gluconate kinase gntV gene (also known as gntK) and a second hypothetical gntK gene (also known as gntK2). Both gluconate kinases encoded by these genes belong to this family, however the protein encoded by C. glutamicum gntV is not included in this model as it is truncated in the C-terminal domain.	0
NZ_CP009258.1\|WP_003732084.1\|2214982_2216722_+\|DNA-polymerase-III-subunit-gamma/tau	gnl\|CDD\|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP009258.1\|WP_003722073.1\|2207227_2208166_+\|GW-domain-containing-glycosaminoglycan-binding-protein	gnl\|CDD\|226309	COG3786, COG3786, Uncharacterized protein conserved in bacteria [Function unknown].	6.39605e-99
NZ_CP009258.1\|WP_003732089.1\|2204357_2206097_+\|thiol-reductant-ABC-exporter-subunit-CydC	gnl\|CDD\|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_CP009258.1\|WP_012951101.1\|2220000_2220852_-\|MurR/RpiR-family-transcriptional-regulator	gnl\|CDD\|224651	COG1737, RpiR, Transcriptional regulators [Transcription].	3.97147e-62
NZ_CP009258.1\|WP_003728589.1\|2214027_2214210_+\|DUF3188-domain-containing-protein	gnl\|CDD\|371501	pfam11384, DUF3188, Protein of unknown function (DUF3188). This bacterial family of proteins has no known function.	4.70726e-11
NZ_CP009258.1\|WP_003722065.1\|2214227_2214692_+\|DUF3284-domain-containing-protein	gnl\|CDD\|378692	pfam11687, DUF3284, Domain of unknown function (DUF3284). This family of proteins with unknown function appears to be restricted to Firmicutes.	5.35099e-31
NZ_CP009258.1\|WP_009913205.1\|2220957_2221332_-\|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM	gnl\|CDD\|184702	PRK14484, PRK14484, phosphotransferase mannnose-specific family component IIA; Provisional.	2.28713e-49

>NZ_CP009258.1|WP_003722065.1|2214227_2214692_+|DUF3284-domain-containing-protein
MNVTQKLYISQKECFDTLVSSAIYDVKNATGKTLQVRKLEGYKYQRTMSNGALATTKIVKVQPNELYQFETSSRVNTHTTTYTIKSTSETTCEVTYNELIETEKALNKMNNIIVGFMFGFFRKKRVKNLLKSIELSVINESKQKQEKLAAKSEQ
>NZ_CP009258.1|WP_003728589.1|2214027_2214210_+|DUF3188-domain-containing-protein
MKIVNALFIISIGLIIIMFSPSYGKDGMASVPLLVTGLAVVLIGCVFIVLKIRKDKKEKN
>NZ_CP009258.1|WP_003728590.1|2213803_2214025_+|hypothetical-protein
MIILNCPMKRDYITELLETHDKDGVTFKKIAEQGMKLTFETNIEDEEKAAKIAKETIKATEIGSVLYFQVSVG
>NZ_CP009258.1|WP_003728591.1|2212304_2213669_+|PTS-sugar-transporter-subunit-IIC
MNGLTAFLEKYFVPVAAKIGSQKHLVALRDAFISTMPITMAGSIAVLLNAFFRDFPTDWGWTGFVEAMQPLIDINGYVYNGTLAIVSIIFAFSLGYNLSKAYEVDRLAGGLVSLAAFVMNLTVTVSLDAVKAAIAASNANFDVATLPKEFAGIYGFFSLSQVNGTGLFTAMIFGFISTIIYAKLMRRNIIIKMPDSVPPAVSKAFAAIIPALVALYVVGIIDWAFFKITNMDVITWISKTIQEPLLSLSQGYGAVLLVTFLVQLLWFFGIHGPNVLAPVLESLWGTAQLQNISAAQDGAKLPFEWVRGSFDAYVWMGGSGGTLVLIIALLMFSKRADARTVAKLSLAPGIFNINEPIMFGLPIVLNTIYLIPFLIAPMVMVTIAYFATTLGIVGPVKIAVVWVMPPLLNSFLATGGDWMAPVISLINMVVAFLIWVPFVITANRVGVPEEEMKA
>NZ_CP009258.1|WP_009931588.1|2211706_2211862_-|hypothetical-protein
MAVKRDMPEESKNSKVVKKEHFSIVFPDDIKEPATVEEKKKQDAEKKTDDN
>NZ_CP009258.1|WP_009925039.1|2210493_2211135_+|hypothetical-protein
MQQLKSKKKWLPALIVAVFVGIIVILAIMFGFFQRQEVFDKYEVAYEIDGKLYEVFPISATDIGVDKKSKDKNLYFRVNSYYNIDYLFRLAYKQYEINEPSTNKYYSGLIDYSVADNAYVTQKDVYITNNESYATYDFFDKNGKKIYTYNPEETSNDDYIVRIKPTILQGYEKSDIGSYDDYLNITALFKDKLGMDVNVRIDEDKEMVIFSIK
>NZ_CP009258.1|WP_003732087.1|2208281_2209796_+|gluconokinase
MTSKPYIMGVDIGTSSTKAVLFNQRGEVIFRQATHYELITDETGKAEESPTEIFDAVLTSIQAVMKNINTEELAGISFSSAMHSLIMVGSNGELLTECITWADGRSSETLEKVKRDNYLFQLYEATGTPIHPMSPFAKICWLKEEKPTLFKRTEKFVDIKSYILYRLFGVWVMDESLASGTGLYNIMEHDWEFEAMEIVKLTPDFLPKVVPETYQLAGVKKEYAELMGIPENLPFIIGGSDGALANIGIQATGQNDVTITVGTSGAVRKLTDQFQIDSRGRTFCYGAGDGYFIAGGAVNNGGKVVEWGLQQFGSEAEISRRDFASFIAKIEEVPPGAAGLLFQPYLLGERAPFWTNDIRGGFVGLTINHTKAHFIRAILEGVAFNLAEVYEAVSAPDDIIYVTGGISAHDAWCKLLADILNREIRVPHTIEGSSLGAAIIGMRSLGILKDLNLKHTLPIKAVYHPSENVLKYAELRLIFKQVTTQLMSSYSQLNSWQKKFDINS
>NZ_CP009258.1|WP_003722073.1|2207227_2208166_+|GW-domain-containing-glycosaminoglycan-binding-protein
MKKLLSGLIVVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVNQSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIITREGKTARAKWYYCKLGNTTIGWIDSRAFTNIGKPTIADTVPALWNSKKAIITTKPKSTTATTYFFQKNSAGNWYEVRHFTSHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDKAYNTWQERNSSSSADEKMKIPQYKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGCVAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN
>NZ_CP009258.1|WP_003722074.1|2206237_2207185_+|LPXTG-cell-wall-anchor-domain-containing-protein
MKKFHGLILTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTDTTENIITEEKTEPAEPTKDTTVTPPQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTATLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDNEDGKTTAVKLNYLVKEKTAQLTITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQITAYAFDESGNYSEEVTYQVPAKKQNEAVVTAPDKVKKIETKNAVKSATTKPTDVTKVTKDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK
>NZ_CP009258.1|WP_003732089.1|2204357_2206097_+|thiol-reductant-ABC-exporter-subunit-CydC
MRKSSWIIPYIKENRGLFLLVIFLGTLTFASAGALMFTSGHLISKSSLMPESIMAVYISTVGVRAFGIMRSVSRYVERLSSHSLVLRILEKMRVRLYRLLEPQALLLKSRYKTGDILGLLAGDIEHLQNFYLTTMLPAIVSLVLYAGVVIALGAFSIPFAALFVLLIGLLVLVLPWVSLLYARGKNAYLKQGRNSLYQKFTDAVFGISDWKFSGREKTFISNYEKDEADMLRTENKQFHFVNWRDFFSQLVVGFMVIVMVYWSTAESRDGAFSGTMIAAFVLAIMALAEAFVPVSSAISDKSLYQDSLARLDKIEDPALPTFEEETKEIERINTENVVLKAENLTFAYDEKSPEILNGFDFTLQQGEKVAIIGRSGTGKSTFLKLVQGALLPTAGKVTMNDVEVEKLRPQIPELTSMLNQKAHLFSTTVLNNIRLGNQDASDEEVYEAAKKVQLHDFIMSMPDGYHTQMSEMGERFSGGERGRIALARILLQNTPIVILDEPTVGLDPITERDLLATIFETLADKSLIWVTHHLVGAEKMDRVLFLEEGKTLMEGPHAELMAEEPRYKRLYQLDRPIEL
>NZ_CP009258.1|WP_003732084.1|2214982_2216722_+|DNA-polymerase-III-subunit-gamma/tau
MAYQALYRVFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFSGPRGTGKTSAAKIFAKAINCEHGHDGEPCNECEICKGTTDGSIPDVLEIDAASNNGVEEIRDIREKVKYAPTVAKYKVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPHKLPLTIISRVQRFDFKRITTQDIIGRLKFILEEEKIPYDEKALMIVARAAEGGMRDALSLLDQVISYGSEEVTVEDALEITGSVAQNLLTKLVSAAFDGDAAEAISTLTALLAEGKDPVRLVEDLLVFFRDVLLYQKAPNLEETMERALIDDDFVALAKRADSLKVYEFVKILNTAQQQMRFSNHPGIYVEVALVQLTQAGQSVAGGGNVPADAASGSDVSDLKRQMEQMHQEIQTLKKQIASGAGAAPADKPTQNRGGSKKAINNGKQFKAPIGKINHVLGEAKKENLQLIRGCWGELLSMLMASQAALLNDAEPVAASQDTFVLKFKHEIHCQMAMDNPNFVETITSSIARLTQVNYTFIGIPEDQWADVRENFLHSHGSDADAEDGANPEAKKPAEDPFVAEAAKLVGEDLLEIKD
>NZ_CP009258.1|WP_003722063.1|2216751_2217069_+|YbaB/EbfC-family-nucleoid-associated-protein
MRGMGNMQGMMKQMQKMQKEMAKAQADLEAQEFTGTAGGGMVTVKATGKRVITDVVINEEVVDPEDIEMLQDLVLAATNDVLKQIEDTTSQTMGKFTQGLNIPGM
>NZ_CP009258.1|WP_003722062.1|2217177_2217774_+|recombination-protein-RecR
MHYPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFAKALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHGLYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLLKPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREV
>NZ_CP009258.1|WP_003722061.1|2217788_2218034_+|YaaL-family-protein
MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQENWHKQKVLMRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK
>NZ_CP009258.1|WP_009931159.1|2218079_2218922_-|aldo/keto-reductase
MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVGYRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQLDQIDLYLVHWPKQDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPVVDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAEKHGKSPAQIVLRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYVRSEI
>NZ_CP009258.1|WP_012951100.1|2219042_2219882_-|Cof-type-HAD-IIB-family-hydrolase
MTTQAIILDIDGTLLNDDKQISPETKKALITAQENGVKLILASGRPTTGMHVYAEQLEMEKHHGLLVSYNGAKVVDCATNEELFNQALTVEEGKAVLEHMKQFEVKVMIDKEDYMYTNDVYDCYVPYRGEEINIIQYESRGGNFKLCEKDDLAAFLDYRLSKILTAGDPAYMQKNYQAMMAPFKDTLNCVFTADFYFEFTAQGIDKAKALDTVLTPMGIHAENIVAFGDGHNDITMVEYAGTGIAMQNAVVELKAAASSVTLSNNEDGIAHVLNSLIPS
>NZ_CP009258.1|WP_012951101.1|2220000_2220852_-|MurR/RpiR-family-transcriptional-regulator
MNILIKIRELTNLTNSEKELANYILVNPKKTLQFKPKELAAAAFVSAATIYRLINKLGLNGIGELKIEIASSLRETNAEKDINYDYPILESDTPYQIMTNLNQIYKGTIDETLNNADPEELVKIGEKLINAKTIDVYAASANLFFAQNFKFQMQEIGVLVNVPEEDYIQSLSAANSDENHIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNPLVEFATHKIYMASAENHYNKVSSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQKMNTELE
>NZ_CP009258.1|WP_009913205.1|2220957_2221332_-|PTS-dependent-dihydroxyacetone-kinase-phosphotransferase-subunit-DhaM
MTKPYGVVIISHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRIGTSFDAVNEAIESNEADKVYTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK
>NZ_CP009258.1|WP_012951102.1|2221335_2221932_-|dihydroxyacetone-kinase-subunit-L
MTYDKDWALRWLNDFGERVQENKQLLSDLDQAIGDGDHGINMARGLSELKKVFTEKEPADLKDVFKTAGMTMVSKVGGASGPLYGTAFLNMSKAVDADTIDAVGLTKVIEAGLEGIEKRGKSHAGEKTMIDVWEPVVHALHQEDLTDDVVDAALQKTKDLKATKGRASYLGERSIGHLDPGAYSSALLFHAMLQTEVS
>NZ_CP009258.1|WP_003732079.1|2221953_2222943_-|dihydroxyacetone-kinase-subunit-DhaK
MKKILNGTDQVVEQMVEGLVKSHADVVHRVEGTRVIARNDKRPGKVGLVSGGGSGHEPAHAGYVGRGMLSAAVCGDVFTSPTPDQIYEGIKAADQGAGVLLIVKNYTGDVMNFEMAADLADADDIKVEQIVVDDDIAVEDSTFTTGRRGVAGTVLVHKIIGAAAEAGASLDELKALGEKVIASVKTLGVALSPCTVPEVGHPGFELGDDEIELGIGIHGEPGFTREKIMPSASLAKQLYERISNESKLLAGDKVVVLVNGMGATPLMEQYVFANDVHELLKNAGVQVAKTLVGDYMTSLEMAGLSLTILKLEDEKWVDMLKLPVDTIAW

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Crispr_ID: NZ_CP009258_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009258_4

2451092-2451248

Orphan

Consensus_repeat	Method
ATTTAGGTAAATTTTGAAAATCAGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP009258_4

>merge|NZ_CP009258|4|2451092-2451248|CRISPRCasFinder
ATTTAGGTAAATTTTGAAAATCAGGTGTATTGGTTAATAAATTTGCATTTAAATCTAAAAATACGAGATTTGGTAAATTTTGAAAATCAGGAATAGTTGTCAATTGGTTAGAACTTAGATCTAACGTAATAAGTAAAGGAATATTATTAAAATTAGG

>NZ_CP009258|4|4|2451092-2451248|CRISPRCasFinder
ATTTAGGTAAATTTTGAAAATCAGG	TGTATTGGTTAATAAATTTGCATTTAAATCTAAAAATACGA
GATTTGGTAAATTTTGAAAATCAGG	AATAGTTGTCAATTGGTTAGAACTTAGATCTAACGTAATAA
GTAAAGGAATATTATTAAAATTAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009258.1\|WP_012952019.1\|2442790_2443774_+\|UDP-glucose-4-epimerase-GalE	unknown	unknown	gnl\|CDD\|224012
NZ_CP009258.1\|WP_003722610.1\|2441712_2442672_+\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP009258.1\|WP_012952012.1\|2456468_2456867_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009258.1\|WP_074471727.1\|2457498_2459733_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP009258.1\|WP_003722612.1\|2439575_2440073_+\|acyltransferase	unknown	unknown	gnl\|CDD\|100053
NZ_CP009258.1\|WP_012952017.1\|2444893_2446624_+\|phospho-sugar-mutase	unknown	unknown	gnl\|CDD\|100092
NZ_CP009258.1\|WP_012952018.1\|2443790_2444852_+\|galactose-mutarotase	unknown	unknown	gnl\|CDD\|185696
NZ_CP009258.1\|WP_003722605.1\|2447608_2448577_+\|YvcK-family-protein	unknown	unknown	gnl\|CDD\|211689
NZ_CP009258.1\|WP_003722596.1\|2456883_2457492_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP009258.1\|WP_003722604.1\|2448584_2449556_+\|DNA-binding-protein-WhiA	unknown	unknown	gnl\|CDD\|224398
NZ_CP009258.1\|WP_003732488.1\|2459811_2460738_+\|membrane-dipeptidase	unknown	unknown	gnl\|CDD\|366534
NZ_CP009258.1\|WP_012952008.1\|2462682_2463729_+\|sugar-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225263
NZ_CP009258.1\|WP_003722606.1\|2446731_2447607_+\|RNase-adapter-RapZ	unknown	unknown	gnl\|CDD\|235450
NZ_CP009258.1\|WP_012952009.1\|2460896_2462240_+\|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl\|CDD\|274109
NZ_CP009258.1\|WP_003722600.1\|2453472_2454069_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|178955
NZ_CP009258.1\|WP_012952014.1\|2454225_2455659_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225932
NZ_CP009258.1\|WP_009924964.1\|2449582_2450599_+\|NADPH-dehydrogenase-NamA	unknown	unknown	gnl\|CDD\|184110
NZ_CP009258.1\|WP_012952013.1\|2455906_2456242_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP009258.1\|WP_009930948.1\|2440158_2441634_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP009258.1\|WP_003732491.1\|2452035_2453427_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|129987

Protein	Function_ID	Function_description	E-value
NZ_CP009258.1\|WP_012952019.1\|2442790_2443774_+\|UDP-glucose-4-epimerase-GalE	gnl\|CDD\|224012	COG1087, GalE, UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane].	0
NZ_CP009258.1\|WP_003722610.1\|2441712_2442672_+\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	3.0648e-149
NZ_CP009258.1\|WP_074471727.1\|2457498_2459733_+\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	7.01376e-132
NZ_CP009258.1\|WP_003722612.1\|2439575_2440073_+\|acyltransferase	gnl\|CDD\|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	1.81171e-27
NZ_CP009258.1\|WP_012952017.1\|2444893_2446624_+\|phospho-sugar-mutase	gnl\|CDD\|100092	cd05799, PGM2, This CD includes PGM2 (phosphoglucomutase 2) and PGM2L1 (phosphoglucomutase 2-like 1). The mammalian PGM2 is thought to be a phosphopentomutase that catalyzes the conversion of the nucleoside breakdown products, ribose-1-phosphate and deoxyribose-1-phosphate to the corresponding 5-phosphopentoses. PGM2L1 is thought to catalyze the 1,3-bisphosphoglycerate-dependent synthesis of glucose 1,6-bisphosphate and other aldose-bisphosphates that serve as cofactors for several sugar phosphomutases and possibly also as regulators of glycolytic enzymes. PGM2 and PGM2L1 belong to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the bifunctional phosphomannomutase/phosphoglucomutase (PMM/PGM). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP009258.1\|WP_012952018.1\|2443790_2444852_+\|galactose-mutarotase	gnl\|CDD\|185696	cd09019, galactose_mutarotase_like, galactose mutarotase_like. Galactose mutarotase catalyzes the conversion of beta-D-galactose to alpha-D-galactose. Beta-D-galactose is produced by the degradation of lactose, a disaccharide composed of beta-D-glucose and beta-D-galactose. This epimerization reaction is the first step in the four-step Leloir pathway, which converts galactose into metabolically important glucose. This epimerization step is followed by the phosophorylation of alpha-D-galactose by galactokinase, an enzyme which can only act on the alpha anomer. A glutamate and a histidine residue of the galactose mutarotase have been shown to be critical for catalysis, the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. Galactose mutarotase is a member of the aldose-1-epimerase superfamily.	4.99806e-149
NZ_CP009258.1\|WP_003722605.1\|2447608_2448577_+\|YvcK-family-protein	gnl\|CDD\|211689	TIGR01826, Putative_gluconeogenesis_factor, conserved hypothetical protein, cofD-related. This model represents a subfamily of conserved hypothetical proteins that forms a sister group to the family of CofD, (TIGR01819), LPPG:Fo 2-phospho-L-lactate transferase, an enzyme of cytochrome F420 biosynthesis. Both this family and TIGR01819 are within the scope of the pfam01933. [Hypothetical proteins, Conserved].	1.06416e-165
NZ_CP009258.1\|WP_003722596.1\|2456883_2457492_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	3.34543e-18
NZ_CP009258.1\|WP_003722604.1\|2448584_2449556_+\|DNA-binding-protein-WhiA	gnl\|CDD\|224398	COG1481, COG1481, Uncharacterized protein conserved in bacteria [Function unknown].	7.47224e-145
NZ_CP009258.1\|WP_003732488.1\|2459811_2460738_+\|membrane-dipeptidase	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	7.63415e-121
NZ_CP009258.1\|WP_012952008.1\|2462682_2463729_+\|sugar-binding-transcriptional-regulator	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	4.57723e-90
NZ_CP009258.1\|WP_003722606.1\|2446731_2447607_+\|RNase-adapter-RapZ	gnl\|CDD\|235450	PRK05416, PRK05416, RNase adapter RapZ.	1.97711e-175
NZ_CP009258.1\|WP_012952009.1\|2460896_2462240_+\|RNA-polymerase-factor-sigma-54	gnl\|CDD\|274109	TIGR02395, RNA_polymerase_sigma-54_factor, RNA polymerase sigma-54 factor. A sigma factor is a DNA-binding protein protein that binds to the DNA-directed RNA polymerase core to produce the holoenzyme capable of initiating transcription at specific sites. Different sigma factors act in vegetative growth, heat shock, extracytoplasmic functions (ECF), etc. This model represents the clade of sigma factors called sigma-54, or RpoN (unrelated to sigma 70-type factors such as RpoD/SigA). RpoN is responsible for enhancer-dependent transcription, and its presence characteristically is associated with varied panels of activators, most of which are enhancer-binding proteins (but see Brahmachary, et al., ). RpoN may be responsible for transcription of nitrogen fixation genes, flagellins, pilins, etc., and synonyms for the gene symbol rpoN, such as ntrA, reflect these observations [Transcription, Transcription factors].	0
NZ_CP009258.1\|WP_003722600.1\|2453472_2454069_-\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|178955	PRK00277, clpP, ATP-dependent Clp protease proteolytic subunit; Reviewed.	2.30261e-143
NZ_CP009258.1\|WP_012952014.1\|2454225_2455659_+\|hypothetical-protein	gnl\|CDD\|225932	COG3397, COG3397, Uncharacterized protein conserved in bacteria [Function unknown].	1.28928e-100
NZ_CP009258.1\|WP_009924964.1\|2449582_2450599_+\|NADPH-dehydrogenase-NamA	gnl\|CDD\|184110	PRK13523, PRK13523, NADPH dehydrogenase NamA; Provisional.	0
NZ_CP009258.1\|WP_012952013.1\|2455906_2456242_-\|membrane-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	6.49883e-05
NZ_CP009258.1\|WP_009930948.1\|2440158_2441634_+\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	1.99642e-10
NZ_CP009258.1\|WP_003732491.1\|2452035_2453427_+\|amino-acid-permease	gnl\|CDD\|129987	TIGR00909, putative_amino_acid_transporter, amino acid transporter. [Transport and binding proteins, Amino acids, peptides and amines].	7.80162e-139

>NZ_CP009258.1|WP_009924964.1|2449582_2450599_+|NADPH-dehydrogenase-NamA
MSKLFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHYVSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQLAHAGRKAVLPGEIVAPSAIAFDEKSDKPVELTKEAIKEVVADFKRAAYRAKEAGFDVIEIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEVWDGPIIVRVSATDYAHGGLQLEDHIPFAKWMKADGVELIDVSTGGLVNVAPPVFPGYQVPFADEIRRGAGIATGALGLITRGEQAEEILCNERADLIIVGRELLRNPYFAKDAAKQLGETIEAPKQYSRAWK
>NZ_CP009258.1|WP_003722604.1|2448584_2449556_+|DNA-binding-protein-WhiA
MSFASETKKELTHMDVSDSDAKVELAAFIRMNGAISFSSQLVIMDVQTENAAIARRMYQLLKDLYEVPIELLVRRKMKLKKNNVYIVRLKSGTRGILEDLRILEPPMTFTKSIDRGFVKKRSAKRAYLRGAFLASGSVNNPETSSYHLEIFSVYEEHNEAICALMNQFDLNARTLERKNGFITYLKEAEKITEFLSIIGATSALLHFEDVRIMRDMRNSVNRLVNCETANLNKTINAAVRQIDNIKYIQSTVGLEALPERLREIAALRIANEDVTLKELGEMLTTGQVSKSGINHRLRKLDQIAERLRSGETPAQVGLKISNS
>NZ_CP009258.1|WP_003722605.1|2447608_2448577_+|YvcK-family-protein
MKKETKPRVVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGSSGKIREQMDVLPPGDIRNVMLALSNVDPRVVDLFQYRFAVDGDLSGHVIGNLILTALSQLNDSYVDAINVLATVLKIRGKVIPATDQPLILNAEMEDGSIVHGESLIPLQGKHINRVYIEPENVKPYPTAVEAVKEADLIVIGPGSLYTSILPNLLLTELADEITASKAPKVYITNILTQIGETDFFSDADHIKVIHEHVGKSFIDKTLINTTTVPKELLFPEDVAQVEHNAKGMEELGVEAIYQDFLSTEDGLVRHAAEKVADALLAMLPNQTNEKE
>NZ_CP009258.1|WP_003722606.1|2446731_2447607_+|RNase-adapter-RapZ
MASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPKFWELMKESDKMDKIALVMDLRGREFFDSIEPALDELDNTNFITTKILFLEADDKVLVSRYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQTEDKDIFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMKWPETQTFLDKLVDLLMFTLPFYKREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKYETTISHRDMKRRKGR
>NZ_CP009258.1|WP_012952017.1|2444893_2446624_+|phospho-sugar-mutase
MNWQEEYQKWVANDKLDSTLRKQLTNMETNEKELEDSFYRNMEFGTAGMRGVLGAGTNRMNIYTIRKASLGLAQFVAENGEEAKKRGIVIAYDPRHMSREFAFESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGEDGGQMPPTGASAVIEYINAVEDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEVIVNKELVQERGEDLKIVFTPLHGTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVKSPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNADGEYEVLSGNQIGAIILHYLLKQKKAQNELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHFEETGKHTFEFGYEESNGYMVKPFTRDKDAIQAVLAVAEVALVSKVAGRTLLEDLDQIYDEFGYYNEDLVSLTLSGKDGSRRIKEITSSFREQLPTSMGGFVVERAEDYLRSETTWIATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGENKEESTAKLEKVKADLMQHIEA
>NZ_CP009258.1|WP_012952018.1|2443790_2444852_+|galactose-mutarotase
MIFIEVMKERFGEFEGETVWKWTMINDHDMRMSVLNYGAIVTSLETKDKFGDFANINLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNEGSNHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGKIDAKMTYTLNNKNEWLIDYEARSNQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIGEKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHTFILKHENGRPDAVLFDPKSGRRLEMETKADSVLIYTANSLDGSFEIDERAVPKYAGITMETQGLVDAINHDGFGDIVLRPEKPFTSRTAFRFTVES
>NZ_CP009258.1|WP_012952019.1|2442790_2443774_+|UDP-glucose-4-epimerase-GalE
MGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHRESIHKKAKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYGMKFVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYLKNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPAEVVPRRAGDPGTLIASSDKASEILGWEPTYTDVKDIIATAWKWHVSHPNGY
>NZ_CP009258.1|WP_003722610.1|2441712_2442672_+|thioredoxin-disulfide-reductase
MASEEKIYDVIIIGAGPAGMTAALYTSRADLDTLMIERGVPGGQMVNTAEVENYPGFDSILGPDLSDKMLSGAKQFGAEYAYGDIKEVVDGKEFKTVTAGSKTYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVEEGTYLTRYADKVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGAKLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEMRTNLPGIFAAGDVRAKSLRQIVTATGDGGLAGQNAQKYVEELKESLEAEAAK
>NZ_CP009258.1|WP_009930948.1|2440158_2441634_+|hypothetical-protein
MEKDKKIPAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRASELEPGEAVILCQLAICYTEIGQFHKSNQLLREVLEQRNGNMEYCYYFIANNFAYMKDYRRALQYANRYLDSSTDGEYTEEAKDLIEVLLEETPFGETIENGFSKLEQEFYSYKKEINRYLAEEDSASACDILRKVIDEKPNFWPAYNQLASLYFEQLKEEEGVRVLSDLLSRNPGNLLGICDLFIYHFYKGNRKEADELYLELRDVLPVLAHHKEKLGLIHAMMGEYEEADDLLEQVADLEVTERSKYYYFRAKSSYYLGDVEGAKMFWHSFLECDLYEDVRFPWEQEPDLTNDTRLVLEMLQEEDDLTHMLGVYALTISGNRPELVLFHPLLDMSDWSYMEHLMFTNFDYFPDGAIEQNGYLIAKAMIILKENGILLNEEYMALYKQMFSLVLIDAGKDLILGRYTIETVASAIAKLFLPHLKLQLVEEFECSKCARDIERVLSR
>NZ_CP009258.1|WP_003722612.1|2439575_2440073_+|acyltransferase
MRRLDRFNAPDDTVNTLFQVYKTISFWKVLKNTLVIEFGRFFPWMGGKRKIYRVCLGMEIGEKTAIAYKVMPDLFFPEKILIGENSIIGYHTTILTHEYLLSEYRVGEVVIGRDVMVGANVTILPGTVIGDGAVIAAGAVVSVDVPAGSFAYGNPLIIKEKATLT
>NZ_CP009258.1|WP_003732491.1|2452035_2453427_+|amino-acid-permease
MTKVNSFFRKKSFHNPATDKHHLNKSLGAFDLTMLGVGAVVGGGIFILPGQVASVIAGPGIIISFIIAGIACCLAALCYSEFASKLPVAGSAYTYSYHVFGEGVAWILGWSLILEYGLAVAAIASGWSSYMKSLLAGFDLHIPTAISSAYDPSAGTYFDLLAFVVVMVIGILLSFGIRESTRVNNIMVLVKIAVVVLFILVGAFYVKPDNWTPFLPFGVQGVITGASTVFFAYIGFDAVSSAAEEVKNPQKNMPIGIISSLAVCTLLYILLSAVLTGVVPYTDLVDVSAPVAFALQAINQNWIAGLLSVGAIVGMTTVVLVMSYGGTRLLFAMGRDGLLPKSFSKISKNDTPVRNTMIFATVMGLIASTVPMADLAQLINIGTLFAFAMVSIGIFFLRRNPDLNQKGFKTPFYPVVPALSFLLCVYLMINLSKTTWIAFGIWFVIGILVYTFYGRKHSALRIK
>NZ_CP009258.1|WP_003722600.1|2453472_2454069_-|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDIIINKSGLKG
>NZ_CP009258.1|WP_012952014.1|2454225_2455659_+|hypothetical-protein
MKKMTKIGMFFAVFTLAVVLFQTTASAHGYISKPASRVYLANKGINVGVGSAQYEPQSVEAPKGFPISGPADGSIAGGGKYSLLDEQSASRWAKVDIEPGPLTVEWTLTAPHKTSSWQYFITKKGWDPNKPLTRSSLEPLATIEADGSVPNALAKQEINIPNDRSGYYVILGVWNIADTGNAFYQVIDANIINSDITPVADTEAPTKPTNLAATTTKTVSLAWNASTDNVGIKGYEILRDGVVIGESQTASYEDTTVESNTAYTYTVRAKDFAGNKSTLSNSINVTTKEVPAVDNEAPTAPKSLMSHGQTDTTIALCWQASTDNVEVKNYEIYRNNTKIATSTKTMFEDTKLASNTSYNYKVYAVDTSGNRSLVSNEITIKTKTLDPLNTWKSDQIYNAGDQVYYNGVAYTAKWWTKGNTPDTSDVWQTASTDIQTWNVQKAYNGGDKVTYNGKTYQAKWWVRGEKPDSSSIWTLLN
>NZ_CP009258.1|WP_012952013.1|2455906_2456242_-|membrane-protein
MVEQNYMETRNGRTSFFDGGLLQYIGWTILGTLVTLCTFGICYPWALCMVYGWKINHTVIEGRRLKFQGSAVSLFGHWVKWLLLTIITIGIYGFWVFIKLEDWKVKNTIFN
>NZ_CP009258.1|WP_012952012.1|2456468_2456867_+|hypothetical-protein
MAASLKDRLEEEVKTYSADNNLTVQTIDFLYAGPHMRGRHSLVLAFTEAGIFTFVFKLSDAEMHFLDGKTVQQIALEKKKLVYRLYIRAVTEEGELEEGKYLVSKRVLGRKWHKETLEKLINKNLPLLTATK
>NZ_CP009258.1|WP_003722596.1|2456883_2457492_+|TetR/AcrR-family-transcriptional-regulator
MEKKRTRAEELGITRRKILDTARDLFMEKGYRAVSTREIAKIANITQPALYHHFEDKESLYIEVVRELTQNIQVEMHPIMQTNKAKEEQLHDMLIMLIEEHPTNILLMIHDILNEMKPENQFLLYKLWQKTYLEPFQQFFERLENAGELRNGISAETAARYCLSTISPLFSGKGSFAQKQTTTEQIDELINLMMFGICKKEV
>NZ_CP009258.1|WP_074471727.1|2457498_2459733_+|MMPL-family-transporter
MLLFLAFHLSNDKRKNKQTKGGFIMKDGFLSKIASGVGGKKGRFITLGIWIIAIIILQFFFPKAADYKDDAAKDLPNSEPSVVAQKLIDDKFAGTDGVPALITWYRSTGLTNEDLVNIQKYSKELTENPVDYQKMAVPYDKMPPVVLKQQVSKDGTTFIQTVIMKDSATSDQLTESFKQLESAAKTTIGEDPFAQKVSADDTLVARTTGPAGISVDASGLFKDADVSLLIGTVLLVLVFLLVIYRSPILALIPLIAVGFAYLVITPILGLLAKEGIITYGSQGLSIMTVLLFGAGTDYCLFLISRFRSHLHTEKNRFQAFKEAFSGTAGAIALSGLTVMAALLLLLAAEYGSFHNFAVPFSLAIFIMMISSLTLVPALLGIFGRVSFWPFVPRTVEMEETRAKKKGKTPKHHKENRFWHKIGEMSAKHPVRILIITLIILIGCGIFTTQVKYTYDTLSTFPEDMPSREGFTLISDHFGAGMLAPMEVVVNSKESMKSSLENVDGVASVTGPERSKGYQKYTLILKDNPYSNEAMDVVPKVRAAADKGNDVYIAGQTATQYDDRAVTEHDEKVIIPLVIALIAILLLCYLRSITAMLYLVATVLLSFVGALGLGWVIIHYAMGVEAISGLIPLYAFVFIVALGEDYNIFMISSIWKNSKKMPIRKAITEGVGQTGGVITSAGLILAGTFGVLTTLPIQLLVQFGLITAIGVLLDTFIVRPFLVPSITVLLGKWAFWPGKQHKMTK
>NZ_CP009258.1|WP_003732488.1|2459811_2460738_+|membrane-dipeptidase
MRVIDTHCDALYKLQAGKGKYTFQDAEELDVNFERLIEAKMLLQGFAIFLDEDIPVEHKWKKAVEQVNIFKQHVLHKGGIIHHVKKWCDLENLPEDKIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAEFVIASHSSAKAICAHPRNLDDEQIKAMIEHDAMIHVIFHPLFTTNDGVADIEDVIRHIDHICELGGMKNIGFGSDFDGIPDHVKGLEHAGKYQNFLETLGKHYTKEEVEGFASRNFLNHLPK
>NZ_CP009258.1|WP_012952009.1|2460896_2462240_+|RNA-polymerase-factor-sigma-54
MRLESNFVQKQQQKQSQKLNMTQQLSQSIAMLQFATADLVAFLEDKALENPLIEVIPGSDFATDFSYSSRKSAGSSDDTDWLEQIADNKMTLADALKEQLHLMDVTQTQKIIVLYLIESLNDNGYLQIDLKDVSAALLMDDSSVLEGLEILQSMEPAGVGARDARECILLQIERSPDAPYIAYDVIQKFFTEFAEKKWKKIASEMDVSLQDIQEVSDYIQTLNPKPGSEFESERVQYVVPDLILLQHEDEFAVSLAKQFLPQVRFQEAYYETMRATEEKDVAQFLREKAGEFDWIKKGIEQRESTLQRVGEAIVSHQKAYFLDNSAHLQPLTLKEVAEELGVHESTVSRAVNGKYMETTNGVYELKRFFASGLQKKSSENENIGDISSTTIKMLVQEFVAAEDKLKPLSDQKIVDMLAEKEIQVSRRAIAKYRLELNIPSSSKRKRF
>NZ_CP009258.1|WP_012952008.1|2462682_2463729_+|sugar-binding-transcriptional-regulator
MSDLINIQKKLLPDVLLIMQKRYQILRSIYFSEPVGRRTLAGMLGMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLESVMNQLSGLHSMEEQLAKKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAVMGGSTMATVAEMMTTDFAKGRELLFVPGRGGIGEDLDNQANTICDKMATKTNTKHRVLYVPEQLGEEAYRSLLKEPAIQEGLRLVQSANAIILGIGDALAMAKRRHTGEDVLGKIIHRKAVGEAFGYYFDEQGEVVHKVPTFGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEGAAKSLLKGSNTLLK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP009258_1	1.8\|1530831\|35\|NZ_CP009258\|CRT	1530831-1530865	35	NZ_CP009258.1	2623896-2623930	0	1.0
NZ_CP009258_1	1.9\|1530895\|36\|NZ_CP009258\|CRT	1530895-1530930	36	NZ_CP009258.1	788902-788937	0	1.0
NZ_CP009258_1	1.13\|1531151\|36\|NZ_CP009258\|CRT	1531151-1531186	36	NZ_CP009258.1	2847757-2847792	1	0.972

1. spacer 1.8|1530831|35|NZ_CP009258|CRT matches to position: 2623896-2623930, mismatch: 0, identity: 1.0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

2. spacer 1.9|1530895|36|NZ_CP009258|CRT matches to position: 788902-788937, mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

3. spacer 1.13|1531151|36|NZ_CP009258|CRT matches to position: 2847757-2847792, mismatch: 1, identity: 0.972

gctacatgcttgatgtgctttacacaaaagagagca	CRISPR spacer
gctacatgcttgatgtgctttatacaaaagagagca	Protospacer
**********************.*************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009258_1	1.8\|1530831\|35\|NZ_CP009258\|CRT	1530831-1530865	35	DQ003642	Listeria phage A006, complete genome	15712-15746	0	1.0
NZ_CP009258_1	1.9\|1530895\|36\|NZ_CP009258\|CRT	1530895-1530930	36	MT500540	Listeria phage LP-HM00113468, complete genome	683-718	0	1.0
NZ_CP009258_1	1.9\|1530895\|36\|NZ_CP009258\|CRT	1530895-1530930	36	NC_009812	Listeria phage B025, complete genome	3896-3931	0	1.0
NZ_CP009258_1	1.9\|1530895\|36\|NZ_CP009258\|CRT	1530895-1530930	36	KJ094023	Listeria phage LP-101, complete genome	3936-3971	0	1.0
NZ_CP009258_1	1.14\|1531216\|35\|NZ_CP009258\|CRT	1531216-1531250	35	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	214611-214645	0	1.0
NZ_CP009258_1	1.14\|1531216\|35\|NZ_CP009258\|CRT	1531216-1531250	35	MT500540	Listeria phage LP-HM00113468, complete genome	39834-39868	0	1.0
NZ_CP009258_1	1.14\|1531216\|35\|NZ_CP009258\|CRT	1531216-1531250	35	KJ094023	Listeria phage LP-101, complete genome	5084-5118	0	1.0
NZ_CP009258_1	1.1\|1530830\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530830-1530865	36	DQ003642	Listeria phage A006, complete genome	15711-15746	1	0.972
NZ_CP009258_1	1.2\|1530894\|37\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530894-1530930	37	NC_009812	Listeria phage B025, complete genome	3896-3932	1	0.973
NZ_CP009258_1	1.2\|1530894\|37\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530894-1530930	37	KJ094023	Listeria phage LP-101, complete genome	3936-3972	1	0.973
NZ_CP009258_1	1.2\|1530894\|37\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530894-1530930	37	MT500540	Listeria phage LP-HM00113468, complete genome	682-718	1	0.973
NZ_CP009258_1	1.3\|1530959\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530959-1530994	36	NC_021539	Listeria phage LP-030-2, complete genome	18926-18961	1	0.972
NZ_CP009258_1	1.3\|1530959\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530959-1530994	36	KJ094023	Listeria phage LP-101, complete genome	22882-22917	1	0.972
NZ_CP009258_1	1.5\|1531086\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1531086-1531121	36	MH341453	Listeria phage PSU-VKH-LP041, complete genome	10139-10174	1	0.972
NZ_CP009258_1	1.7\|1531215\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1531215-1531250	36	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	214611-214646	1	0.972
NZ_CP009258_1	1.7\|1531215\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1531215-1531250	36	MT500540	Listeria phage LP-HM00113468, complete genome	39833-39868	1	0.972
NZ_CP009258_1	1.7\|1531215\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1531215-1531250	36	KJ094023	Listeria phage LP-101, complete genome	5084-5119	1	0.972
NZ_CP009258_1	1.9\|1530895\|36\|NZ_CP009258\|CRT	1530895-1530930	36	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	213463-213498	1	0.972
NZ_CP009258_1	1.10\|1530960\|35\|NZ_CP009258\|CRT	1530960-1530994	35	NC_021539	Listeria phage LP-030-2, complete genome	18926-18960	1	0.971
NZ_CP009258_1	1.10\|1530960\|35\|NZ_CP009258\|CRT	1530960-1530994	35	KJ094023	Listeria phage LP-101, complete genome	22882-22916	1	0.971
NZ_CP009258_1	1.12\|1531087\|35\|NZ_CP009258\|CRT	1531087-1531121	35	MH341453	Listeria phage PSU-VKH-LP041, complete genome	10139-10173	1	0.971
NZ_CP009258_1	1.2\|1530894\|37\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530894-1530930	37	NZ_LR134403	Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence	213463-213499	2	0.946
NZ_CP009258_1	1.3\|1530959\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530959-1530994	36	NC_009812	Listeria phage B025, complete genome	23381-23416	2	0.944
NZ_CP009258_1	1.5\|1531086\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1531086-1531121	36	NC_009813	Listeria phage B054, complete genome	10139-10174	2	0.944
NZ_CP009258_1	1.10\|1530960\|35\|NZ_CP009258\|CRT	1530960-1530994	35	NC_009812	Listeria phage B025, complete genome	23381-23415	2	0.943
NZ_CP009258_1	1.12\|1531087\|35\|NZ_CP009258\|CRT	1531087-1531121	35	NC_009813	Listeria phage B054, complete genome	10139-10173	2	0.943
NZ_CP009258_1	1.14\|1531216\|35\|NZ_CP009258\|CRT	1531216-1531250	35	NC_009812	Listeria phage B025, complete genome	5044-5078	2	0.943
NZ_CP009258_1	1.7\|1531215\|36\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1531215-1531250	36	NC_009812	Listeria phage B025, complete genome	5044-5079	3	0.917
NZ_CP009258_1	1.9\|1530895\|36\|NZ_CP009258\|CRT	1530895-1530930	36	JN700520	Staphylococcus phage StB12, complete genome	6832-6867	5	0.861
NZ_CP009258_1	1.2\|1530894\|37\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530894-1530930	37	JN700520	Staphylococcus phage StB12, complete genome	6832-6868	6	0.838
NZ_CP009258_1	1.9\|1530895\|36\|NZ_CP009258\|CRT	1530895-1530930	36	MW084976	Bacillus phage Kirov, complete genome	27565-27600	8	0.778
NZ_CP009258_1	1.2\|1530894\|37\|NZ_CP009258\|PILER-CR,CRISPRCasFinder	1530894-1530930	37	MW084976	Bacillus phage Kirov, complete genome	27565-27601	9	0.757
NZ_CP009258_1	1.8\|1530831\|35\|NZ_CP009258\|CRT	1530831-1530865	35	NZ_CP029455	Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence	130632-130666	11	0.686
NZ_CP009258_1	1.8\|1530831\|35\|NZ_CP009258\|CRT	1530831-1530865	35	NZ_CP015592	Bacillus cereus strain AR156 plasmid pAR460, complete sequence	17622-17656	11	0.686
NZ_CP009258_1	1.8\|1530831\|35\|NZ_CP009258\|CRT	1530831-1530865	35	NZ_CP009368	Bacillus cereus strain FM1 plasmid unnamed, complete sequence	31860-31894	11	0.686
NZ_CP009258_1	1.8\|1530831\|35\|NZ_CP009258\|CRT	1530831-1530865	35	NZ_CP009336	Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence	338888-338922	11	0.686

1. spacer 1.8|1530831|35|NZ_CP009258|CRT matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 0, identity: 1.0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

2. spacer 1.9|1530895|36|NZ_CP009258|CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

3. spacer 1.9|1530895|36|NZ_CP009258|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

4. spacer 1.9|1530895|36|NZ_CP009258|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatttatttcctcctatttt	Protospacer
************************************

5. spacer 1.14|1531216|35|NZ_CP009258|CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

6. spacer 1.14|1531216|35|NZ_CP009258|CRT matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

7. spacer 1.14|1531216|35|NZ_CP009258|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 0, identity: 1.0

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgatctgt	Protospacer
***********************************

8. spacer 1.1|1530830|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to DQ003642 (Listeria phage A006, complete genome) position: , mismatch: 1, identity: 0.972

cgaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
agaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
 ***********************************

9. spacer 1.2|1530894|37|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

10. spacer 1.2|1530894|37|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

11. spacer 1.2|1530894|37|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.973

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatttatttcctcctatttt	Protospacer
.************************************

12. spacer 1.3|1530959|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.972

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagacagtgaaggatgttttag	Protospacer
**************** *******************

13. spacer 1.3|1530959|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagacagtgaaggatgttttag	Protospacer
**************** *******************

14. spacer 1.5|1531086|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.972

cttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
cttgtaacccatcgctgttcctttgacaaaaatcgc	Protospacer
******************.*****************

15. spacer 1.7|1531215|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

16. spacer 1.7|1531215|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to MT500540 (Listeria phage LP-HM00113468, complete genome) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

17. spacer 1.7|1531215|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.972

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgatctgt	Protospacer
 ***********************************

18. spacer 1.9|1530895|36|NZ_CP009258|CRT matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 1, identity: 0.972

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttaatttgatagtcataatctatttcctcctatttt	Protospacer
*******************.****************

19. spacer 1.10|1530960|35|NZ_CP009258|CRT matches to NC_021539 (Listeria phage LP-030-2, complete genome) position: , mismatch: 1, identity: 0.971

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagacagtgaaggatgttttag	Protospacer
*************** *******************

20. spacer 1.10|1530960|35|NZ_CP009258|CRT matches to KJ094023 (Listeria phage LP-101, complete genome) position: , mismatch: 1, identity: 0.971

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagacagtgaaggatgttttag	Protospacer
*************** *******************

21. spacer 1.12|1531087|35|NZ_CP009258|CRT matches to MH341453 (Listeria phage PSU-VKH-LP041, complete genome) position: , mismatch: 1, identity: 0.971

ttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
ttgtaacccatcgctgttcctttgacaaaaatcgc	Protospacer
*****************.*****************

22. spacer 1.2|1530894|37|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to NZ_LR134403 (Listeria monocytogenes strain NCTC7974 plasmid 6, complete sequence) position: , mismatch: 2, identity: 0.946

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttaatttgatagtcataatctatttcctcctatttt	Protospacer
.*******************.****************

23. spacer 1.3|1530959|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.944

tatagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
tatagaaaggagttgagatagtgaaggatgttttag	Protospacer
**************** *.*****************

24. spacer 1.5|1531086|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.944

cttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
cttgtaacccatcgccgttcctttgacaaaaatcgc	Protospacer
***************.**.*****************

25. spacer 1.10|1530960|35|NZ_CP009258|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

atagaaaggagttgatacagtgaaggatgttttag	CRISPR spacer
atagaaaggagttgagatagtgaaggatgttttag	Protospacer
*************** *.*****************

26. spacer 1.12|1531087|35|NZ_CP009258|CRT matches to NC_009813 (Listeria phage B054, complete genome) position: , mismatch: 2, identity: 0.943

ttgtaacccatcgctgtccctttgacaaaaatcgc	CRISPR spacer
ttgtaacccatcgccgttcctttgacaaaaatcgc	Protospacer
**************.**.*****************

27. spacer 1.14|1531216|35|NZ_CP009258|CRT matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 2, identity: 0.943

gccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
gccatttacaatcacccttccggagtttgttctgc	Protospacer
***************************** ****.

28. spacer 1.7|1531215|36|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to NC_009812 (Listeria phage B025, complete genome) position: , mismatch: 3, identity: 0.917

cgccatttacaatcacccttccggagtttgatctgt	CRISPR spacer
agccatttacaatcacccttccggagtttgttctgc	Protospacer
 ***************************** ****.

29. spacer 1.9|1530895|36|NZ_CP009258|CRT matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 5, identity: 0.861

ttaatttga-tagtcataatttatttcctcctatttt	CRISPR spacer
-tagtttgattagtcattatttacttcctcctattta	Protospacer
 **.***** ******* *****.************

30. spacer 1.2|1530894|37|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to JN700520 (Staphylococcus phage StB12, complete genome) position: , mismatch: 6, identity: 0.838

cttaatttga-tagtcataatttatttcctcctatttt	CRISPR spacer
-atagtttgattagtcattatttacttcctcctattta	Protospacer
  **.***** ******* *****.************

31. spacer 1.9|1530895|36|NZ_CP009258|CRT matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 8, identity: 0.778

ttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
ttcttacgatagccattatttatttcctcctattaa	Protospacer
**  * .*****.*** *****************

32. spacer 1.2|1530894|37|NZ_CP009258|PILER-CR,CRISPRCasFinder matches to MW084976 (Bacillus phage Kirov, complete genome) position: , mismatch: 9, identity: 0.757

cttaatttgatagtcataatttatttcctcctatttt	CRISPR spacer
tttcttacgatagccattatttatttcctcctattaa	Protospacer
.**  * .*****.*** *****************

33. spacer 1.8|1530831|35|NZ_CP009258|CRT matches to NZ_CP029455 (Bacillus cereus strain FORC087 plasmid pFORC087.1, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

34. spacer 1.8|1530831|35|NZ_CP009258|CRT matches to NZ_CP015592 (Bacillus cereus strain AR156 plasmid pAR460, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgattttttctt	Protospacer
.*.*** ************* *******.  .

35. spacer 1.8|1530831|35|NZ_CP009258|CRT matches to NZ_CP009368 (Bacillus cereus strain FM1 plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

36. spacer 1.8|1530831|35|NZ_CP009258|CRT matches to NZ_CP009336 (Bacillus thuringiensis strain HD1011 plasmid 1, complete sequence) position: , mismatch: 11, identity: 0.686

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
aagattttaaaatctatatcggttgatttttttct	Protospacer
.*.*** ************* *******.  .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 3356

Bacillus_virus(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732024.1\|92_908_+	ABC transporter permease	NA	NA	NA	NA
WP_003723127.1\|907_1528_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_010989848.1\|1543_2542_-	NAD(P)/FAD-dependent oxidoreductase	G3MA85	Bacillus_virus	8.6e-18	26.7
WP_003732025.1\|2531_3356_-	ABC transporter ATP-binding protein	F2Y165	Organic_Lake_phycodnavirus	4.8e-06	22.4

DBSCAN-SWA_2

7457 : 21191

Bacillus_phage(37.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951821.1\|7457_8351_+	site-specific tyrosine recombinase XerD	A0A0K2CP59	Brevibacillus_phage	1.3e-41	32.3
WP_003723601.1\|8379_9564_+	phosphopentomutase	NA	NA	NA	NA
WP_003723600.1\|9582_10401_+	purine-nucleoside phosphorylase	Q5YBA4	Grouper_iridovirus	2.3e-61	43.2
WP_003732029.1\|10581_11892_+	diaminopimelate decarboxylase	NA	NA	NA	NA
WP_003723598.1\|11907_12657_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	2.7e-08	29.0
WP_003723597.1\|12653_13250_+	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	1.2e-11	30.8
WP_003723596.1\|13252_13987_+	rRNA pseudouridine synthase	NA	NA	NA	NA
WP_003723595.1\|14169_14886_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.2e-45	40.4
WP_003723594.1\|14986_16777_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	2.3e-37	36.2
WP_003723593.1\|16792_17311_+	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003732031.1\|17751_18363_+	ECF transporter S component	NA	NA	NA	NA
WP_003723591.1\|18404_18629_-	ferredoxin	A0A127AYY7	Bacillus_phage	4.6e-12	46.6
WP_025370619.1\|18783_19791_+	hypothetical protein	NA	NA	NA	NA
WP_012951818.1\|19787_21191_+	ATP-dependent DNA helicase RecQ	F2NZ48	Diadromus_pulchellus_ascovirus	6.5e-56	38.6

DBSCAN-SWA_3

29455 : 37458

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003720260.1\|29455_29731_+	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.0e-25	69.7
WP_003724029.1\|29965_30535_+	GTP cyclohydrolase I FolE	E7DN69	Pneumococcus_phage	2.4e-41	47.2
WP_010989844.1\|30593_31361_+	heptaprenyl diphosphate synthase component 1	NA	NA	NA	NA
WP_003726790.1\|31383_32097_+	demethylmenaquinone methyltransferase	NA	NA	NA	NA
WP_012951817.1\|32107_33073_+	heptaprenyl diphosphate synthase component II	A0A1V0SE37	Indivirus	2.3e-07	21.0
WP_003723912.1\|33091_33535_+	nucleoside-diphosphate kinase	D2E8E1	Anguillid_herpesvirus	4.8e-29	48.9
WP_003723911.1\|33738_34905_+	chorismate synthase	A0A291AU41	Pandoravirus	7.1e-48	39.0
WP_012951816.1\|34907_36005_+	3-dehydroquinate synthase	NA	NA	NA	NA
WP_009924600.1\|36001_36376_+	chorismate mutase	NA	NA	NA	NA
WP_012951815.1\|36375_37458_+	histidinol-phosphate transaminase	A0A0H3TLT9	Faustovirus	1.6e-17	24.7

DBSCAN-SWA_4

41300 : 48245

Bacillus_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723904.1\|41300_41846_+	YpiB family protein	G3MAV7	Bacillus_virus	4.8e-31	39.8
WP_003732043.1\|41933_42530_+	DUF1405 domain-containing protein	NA	NA	NA	NA
WP_003728748.1\|42615_43299_+	zinc metallopeptidase	NA	NA	NA	NA
WP_012951811.1\|43412_44678_+	NAD(P)/FAD-dependent oxidoreductase	A0A2H4PQX1	Staphylococcus_phage	1.8e-28	57.9
WP_003723027.1\|44723_47003_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	4.8e-141	37.7
WP_012951810.1\|47237_48245_-	serine hydrolase	A0A1V0SLG8	Klosneuvirus	3.8e-05	26.4

DBSCAN-SWA_5

51704 : 59155

Bacillus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732050.1\|51704_52832_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	2.7e-20	33.5
WP_003723021.1\|52857_53994_-	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	8.8e-19	34.5
WP_003723020.1\|54313_55420_+	FAD-binding oxidoreductase	NA	NA	NA	NA
WP_003723019.1\|55409_56276_-	YitT family protein	M1Q1P6	Streptococcus_phage	3.6e-65	43.0
WP_003723018.1\|56415_56751_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_003723017.1\|56747_57539_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA
WP_003723016.1\|57554_57959_+	methylglyoxal synthase	NA	NA	NA	NA
WP_003723015.1\|57973_59155_+\|tRNA	CCA tRNA nucleotidyltransferase	G3MAR3	Bacillus_virus	2.7e-34	39.9

DBSCAN-SWA_6

63087 : 69013

Bacillus_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723009.1\|63087_65874_+	ATP-dependent DNA helicase DinG	A0A127AW80	Bacillus_phage	1.6e-50	26.0
WP_003723008.1\|65918_66503_+	DUF5590 domain-containg protein	NA	NA	NA	NA
WP_003723007.1\|66525_67707_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003723006.1\|67720_69013_+\|tRNA	asparagine--tRNA ligase	M1PB22	Moumouvirus	7.1e-57	30.8

DBSCAN-SWA_7

73592 : 74198

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951806.1\|73592_74198_-	Holliday junction resolvase RecU	A0A1C8E9C3	Bacillus_phage	1.7e-24	35.5

DBSCAN-SWA_8

82922 : 90636

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732065.1\|82922_83795_+	5'-3' exonuclease	A0A0N7ACJ6	Bacillus_phage	2.0e-39	36.2
WP_003732066.1\|83812_84214_-	ribonuclease HI family protein	NA	NA	NA	NA
WP_003728273.1\|84336_84537_-	cold-shock protein	Q9AZD3	Lactococcus_phage	8.4e-18	63.6
WP_003725831.1\|84901_85330_+	transcriptional regulator MntR	NA	NA	NA	NA
WP_003732067.1\|85486_87169_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA
WP_003732068.1\|87288_89181_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.8e-56	30.2
WP_012951803.1\|89193_90138_+	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	8.1e-119	64.4
WP_012951802.1\|90153_90636_+	dihydrofolate reductase	J9PU01	Bacillus_phage	9.8e-28	47.6

DBSCAN-SWA_9

95414 : 98054

Stenotrophomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951799.1\|95414_98054_-	pyruvate, phosphate dikinase	A0A2D2W2B1	Stenotrophomonas_phage	6.0e-87	41.4

DBSCAN-SWA_10

107038 : 112449

uncultured_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733071.1\|107038_109252_+	copper-translocating P-type ATPase	A0A218MNH6	uncultured_virus	4.6e-112	36.5
WP_003723406.1\|109264_109471_+	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_012951795.1\|109624_111115_+	S41 family peptidase	A0A0R6PIZ1	Moraxella_phage	1.9e-21	30.1
WP_003733073.1\|111151_111568_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003733074.1\|111726_112449_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.9e-12	24.4

DBSCAN-SWA_11

117612 : 125234

Bodo_saltans_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003724126.1\|117612_118524_+	RluA family pseudouridine synthase	A0A2H4UV25	Bodo_saltans_virus	1.4e-11	29.8
WP_003733835.1\|118543_119368_-	STAS domain-containing protein	NA	NA	NA	NA
WP_003733083.1\|119455_119686_-	hypothetical protein	NA	NA	NA	NA
WP_003729510.1\|119916_120468_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA
WP_003723083.1\|120596_121883_+	uracil transporter	Q9KX94	Enterobacteria_phage	2.3e-60	35.8
WP_012951792.1\|121966_122878_+	aspartate carbamoyltransferase catalytic subunit	A0A1J0F9B8	Only_Syngen_Nebraska_virus	5.4e-27	30.3
WP_012951791.1\|122865_124146_+	dihydroorotase	NA	NA	NA	NA
WP_003723080.1\|124142_125234_+	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	R4TGJ8	Halovirus	1.1e-61	37.6

DBSCAN-SWA_12

130831 : 144556

Pandoravirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723075.1\|130831_131461_+	orotate phosphoribosyltransferase	S4VS55	Pandoravirus	3.0e-29	34.1
WP_012951789.1\|131501_132101_-	short chain dehydrogenase	NA	NA	NA	NA
WP_012951788.1\|132188_133901_-	fibronectin/fibrinogen-binding protein	Q84500	Paramecium_bursaria_Chlorella_virus	3.4e-06	36.6
WP_003723072.1\|134057_134933_+	YicC family protein	NA	NA	NA	NA
WP_003723071.1\|134951_135569_+	guanylate kinase	S4W1R9	Pandoravirus	1.0e-13	32.9
WP_003728294.1\|135568_135772_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA
WP_003733092.1\|135926_137126_+	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC	Q9HH70	Methanothermobacter_phage	1.7e-41	31.7
WP_003733093.1\|137130_139524_+	primosomal protein N'	NA	NA	NA	NA
WP_012951786.1\|139537_140476_+\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	4.3e-11	37.9
WP_012951785.1\|140476_141811_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_003723065.1\|141833_142592_+	Stp1/IreP family PP2C-type Ser/Thr phosphatase	NA	NA	NA	NA
WP_003723064.1\|142588_144556_+	Stk1 family PASTA domain-containing Ser/Thr kinase	A0A2H4UVE2	Bodo_saltans_virus	2.1e-23	33.2

DBSCAN-SWA_13

155928 : 157895

Acanthamoeba_polyphaga_mimivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723867.1\|155928_156672_+	3-oxoacyl-[acyl-carrier-protein] reductase	A0A0G2Y924	Acanthamoeba_polyphaga_mimivirus	3.3e-06	31.8
WP_003723866.1\|156778_157012_+	acyl carrier protein	B2ZXV3	Ralstonia_phage	1.7e-06	39.3
WP_012951781.1\|157205_157895_+	ribonuclease III	J2YAN1	Acanthamoeba_polyphaga_lentillevirus	1.5e-24	31.2

DBSCAN-SWA_14

178229 : 183941

Agrobacterium_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010958948.1\|178229_178745_+	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	4.1e-16	38.7
WP_003720098.1\|178766_178967_+	50S ribosomal protein L35	NA	NA	NA	NA
WP_003720097.1\|179006_179366_+	50S ribosomal protein L20	NA	NA	NA	NA
WP_003733284.1\|179406_180162_-	exodeoxyribonuclease III	E3T4M6	Cafeteria_roenbergensis_virus	6.8e-60	47.7
WP_003733285.1\|180245_180776_+	DUF1697 domain-containing protein	NA	NA	NA	NA
WP_012951774.1\|180833_182066_+	peptidase T	NA	NA	NA	NA
WP_009925961.1\|182084_182447_-	hypothetical protein	NA	NA	NA	NA
WP_009930637.1\|182496_183270_-	ABC transporter ATP-binding protein	F2Y302	Organic_Lake_phycodnavirus	8.4e-13	29.5
WP_003723983.1\|183335_183941_+	HD domain-containing protein	A0A1D6Y7U0	Golden_Marseillevirus	4.9e-08	25.9

DBSCAN-SWA_15

190060 : 201505

Synechococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722253.1\|190060_190549_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	8.1e-22	42.0
WP_003733237.1\|190541_191666_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_003729814.1\|191684_192977_+	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	2.5e-17	33.0
WP_012951773.1\|193057_193771_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0E3F9V5	Synechococcus_phage	1.2e-42	38.3
WP_003722248.1\|193782_194028_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_003722247.1\|194031_194715_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_012951772.1\|194707_196927_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	5.0e-159	41.1
WP_003722245.1\|196911_198339_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.1e-53	34.6
WP_012951771.1\|198357_199407_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	4.6e-62	43.5
WP_003722243.1\|199403_199970_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.0e-25	35.9
WP_003722242.1\|199975_201505_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.8e-73	49.3

DBSCAN-SWA_16

205845 : 210081

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072215745.1\|205845_208041_+	DNA helicase PcrA	A7KV33	Bacillus_phage	2.9e-135	41.5
WP_003722235.1\|208065_210081_+	NAD-dependent DNA ligase LigA	A0A0A8J9A9	Ralstonia_phage	1.8e-115	38.8

DBSCAN-SWA_17

214668 : 220910

Catovirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722230.1\|214668_215601_+	diacylglycerol kinase	A0A1V0SBJ0	Catovirus	1.4e-17	30.6
WP_003722229.1\|215748_216504_+	hypothetical protein	NA	NA	NA	NA
WP_012951767.1\|216527_217889_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	1.9e-121	50.1
WP_003722227.1\|218223_218778_+	hypothetical protein	NA	NA	NA	NA
WP_003722226.1\|218808_219282_-	shikimate kinase	NA	NA	NA	NA
WP_003722225.1\|219505_220015_+	hypothetical protein	NA	NA	NA	NA
WP_009926027.1\|220142_220910_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.4e-28	34.7

DBSCAN-SWA_18

226824 : 232097

Feldmannia_irregularis_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722218.1\|226824_227865_+	sensor histidine kinase	Q6XLV6	Feldmannia_irregularis_virus	3.4e-09	28.7
WP_003729791.1\|228262_228904_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_012951762.1\|228914_229562_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.4e-29	38.8
WP_010989800.1\|229563_230379_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_010989799.1\|230469_231576_+	iron-containing alcohol dehydrogenase family protein	NA	NA	NA	NA
WP_009932115.1\|231578_232097_+	N-acetyltransferase	A0A1P8CWJ6	Bacillus_phage	1.6e-28	41.6

DBSCAN-SWA_19

250736 : 253551

Amsacta_moorei_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722201.1\|250736_251417_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	4.6e-15	34.2
WP_003722200.1\|251409_252183_+	hypothetical protein	NA	NA	NA	NA
WP_003722199.1\|252225_253551_+	DEAD/DEAH box helicase	A0A1V0SBR7	Catovirus	3.2e-36	30.0

DBSCAN-SWA_20

267590 : 272140

Lactobacillus_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951751.1\|267590_268235_-	deoxynucleoside kinase	Q5ULP7	Lactobacillus_virus	1.4e-42	44.4
WP_003733117.1\|268341_268722_+	OsmC family protein	NA	NA	NA	NA
WP_003733116.1\|268786_270166_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	3.7e-88	38.9
WP_012951695.1\|270180_270582_+	FosX/FosE/FosI family fosfomycin resistance thiol transferase	NA	NA	NA	NA
WP_012951694.1\|270610_270964_+	hypothetical protein	NA	NA	NA	NA
WP_003724102.1\|271003_271210_-	hypothetical protein	NA	NA	NA	NA
WP_003733114.1\|271237_272140_-	PAS domain S-box protein	A0A2H4J162	uncultured_Caudovirales_phage	7.8e-10	45.2

DBSCAN-SWA_21

279463 : 282985

Clostridium_botulinum_D_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009924860.1\|279463_279925_+	dUTP diphosphatase	Q2WG49	Clostridium_botulinum_D_phage	5.1e-42	58.3
WP_003723878.1\|279956_280937_-	metal-dependent hydrolase	NA	NA	NA	NA
WP_072215809.1\|281137_282235_+	A/G-specific adenine glycosylase	NA	NA	NA	NA
WP_003723876.1\|282238_282985_+	enoyl-[acyl-carrier-protein] reductase FabL	Q06VL0	Trichoplusia_ni_ascovirus	1.3e-10	27.3

DBSCAN-SWA_22

299013 : 301303

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733294.1\|299013_300138_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	A0A0B5JD48	Pandoravirus	7.4e-18	30.8
WP_012951690.1\|300130_301303_+	cystathionine beta-lyase	A0A0B5JD48	Pandoravirus	5.0e-17	26.5

DBSCAN-SWA_23

309085 : 312430

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951688.1\|309085_310495_+	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	1.7e-67	33.7
WP_012951687.1\|310513_311467_-	zinc ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003723261.1\|311616_311883_-	membrane protein insertion efficiency factor YidD	NA	NA	NA	NA
WP_003723260.1\|311956_312430_+	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	5.7e-20	42.4

DBSCAN-SWA_24

319643 : 327223

Staphylococcus_phage(80.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951684.1\|319643_320843_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	6.6e-150	70.0
WP_009930749.1\|320979_322845_+	asparagine synthase (glutamine-hydrolyzing)	A0A1V0SGM7	Hokovirus	1.8e-37	29.4
WP_012951683.1\|322870_323446_-	methyltransferase domain-containing protein	A0A2H4PQV0	Staphylococcus_phage	2.7e-40	45.5
WP_008948020.1\|323442_324408_-	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.1e-49	64.2
WP_031645484.1\|324811_327223_+\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	70.4

DBSCAN-SWA_25

333991 : 337550

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014600887.1\|333991_335761_+	ATP-binding cassette domain-containing protein	W8CYL7	Bacillus_phage	2.1e-51	30.6
WP_003723513.1\|335744_337550_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.9e-46	29.5

DBSCAN-SWA_26

344395 : 347614

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038406020.1\|344395_347614_+	DEAD/DEAH box helicase family protein	A0A1B1ISM1	uncultured_Mediterranean_phage	2.1e-33	27.0

DBSCAN-SWA_27

354719 : 355640

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733218.1\|354719_355640_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-37	38.7

DBSCAN-SWA_28

361319 : 363671

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951669.1\|361319_361925_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	1.7e-40	46.4
WP_012951668.1\|361896_362916_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	3.6e-56	36.8
WP_012951667.1\|362912_363671_+	indole-3-glycerol phosphate synthase TrpC	A0A0P0IR83	Acinetobacter_phage	2.5e-33	38.3

DBSCAN-SWA_29

382051 : 386136

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732542.1\|382051_382852_+	DUF1444 domain-containing protein	A0A2H4PQY3	Staphylococcus_phage	1.9e-36	58.6
WP_012951663.1\|382857_383475_+	DUF4479 domain-containing protein	NA	NA	NA	NA
WP_012951662.1\|383784_386136_+	DNA translocase FtsK	Q853W3	Mycobacterium_phage	1.0e-90	52.0

DBSCAN-SWA_30

392413 : 395002

Enterobacteria_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003727369.1\|392413_393421_+	catabolite control protein A	C6ZCU4	Enterobacteria_phage	1.4e-20	27.7
WP_003727370.1\|393742_395002_+\|tRNA	tyrosine--tRNA ligase	K4F5T3	Cronobacter_phage	2.5e-91	44.4

DBSCAN-SWA_31

405531 : 409666

Mycobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723317.1\|405531_406692_+	acetylornithine transaminase	A0A249XSK4	Mycobacterium_phage	2.5e-13	25.3
WP_010989752.1\|406688_407639_+	ornithine carbamoyltransferase	A0A1J0F9B8	Only_Syngen_Nebraska_virus	3.7e-18	26.6
WP_003723315.1\|407670_408474_-	NAD kinase	NA	NA	NA	NA
WP_010989751.1\|408652_409666_+	signal peptide peptidase SppA	F8QZT1	Wolbachia_phage	2.5e-17	31.2

DBSCAN-SWA_32

418406 : 422790

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989747.1\|418406_419342_+	bifunctional oligoribonuclease/PAP phosphatase NrnA	G3MA01	Bacillus_virus	8.9e-17	24.8
WP_010989746.1\|419463_422790_+	DNA polymerase III subunit alpha	A0A1C9LWZ5	Streptomyces_phage	1.5e-146	30.6

DBSCAN-SWA_33

430410 : 441059

Phage_21(20.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989744.1\|430410_431673_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.7e-10	64.2
WP_003723249.1\|431838_434466_+	DNA polymerase I	A0A218MKQ4	uncultured_virus	7.7e-50	32.5
WP_010989743.1\|434489_435311_+	DNA-formamidopyrimidine glycosylase	G3MA33	Bacillus_virus	3.1e-34	35.5
WP_009926374.1\|435327_435930_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_003723246.1\|436007_436472_+	transcriptional regulator NrdR	NA	NA	NA	NA
WP_010989742.1\|436477_437854_+	helicase DnaB	NA	NA	NA	NA
WP_003732568.1\|437863_438787_+	primosomal protein DnaI	S5MU12	Brevibacillus_phage	6.2e-31	28.9
WP_012951649.1\|439136_441059_+\|tRNA	threonine--tRNA ligase	A0A2K9L6B6	Tupanvirus	1.0e-104	34.2

DBSCAN-SWA_34

447433 : 450085

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951647.1\|447433_450085_+\|tRNA	valine--tRNA ligase	A0A1V0S951	Catovirus	9.2e-160	41.9

DBSCAN-SWA_35

459557 : 459875

Enterococcus_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732583.1\|459557_459875_+\|protease	ribosomal-processing cysteine protease Prp	D2J003	Enterococcus_phage	1.4e-06	31.4

DBSCAN-SWA_36

467881 : 503793

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723536.1\|467881_468889_+	Holliday junction branch migration DNA helicase RuvB	A0A127AWE7	Bacillus_phage	1.6e-08	24.7
WP_012951644.1\|468892_469921_+\|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	NA	NA	NA	NA
WP_003723534.1\|470007_471147_+\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	2.2e-86	45.4
WP_003723533.1\|471180_471510_+	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	1.4e-09	42.5
WP_003723532.1\|471652_471943_+	hypothetical protein	NA	NA	NA	NA
WP_012951643.1\|472043_474308_+	protein translocase subunit SecDF	A0A1B1IVP7	uncultured_Mediterranean_phage	9.3e-20	31.2
WP_003723530.1\|474403_474748_+	DUF1049 domain-containing protein	NA	NA	NA	NA
WP_003733816.1\|474853_477205_+	single-stranded-DNA-specific exonuclease RecJ	A7KV88	Bacillus_phage	3.3e-84	32.6
WP_003723528.1\|477194_477716_+	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	2.5e-29	44.8
WP_003723527.1\|477921_480138_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	S4TRQ0	Salmonella_phage	4.0e-07	40.5
WP_003723526.1\|480153_480606_+\|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	NA	NA	NA	NA
WP_003723525.1\|480642_481926_-	SH3 domain-containing protein	A0A067ZJB6	Vibrio_phage	3.1e-20	35.5
WP_003730164.1\|482376_483654_+\|tRNA	histidine--tRNA ligase	NA	NA	NA	NA
WP_003723523.1\|483656_485432_+\|tRNA	aspartate--tRNA ligase	A0A1V0SJ84	Klosneuvirus	1.1e-12	24.6
WP_003727404.1\|485470_485851_-	hypothetical protein	NA	NA	NA	NA
WP_003723521.1\|486000_486366_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_003723520.1\|486379_487585_-	ammonium transporter	NA	NA	NA	NA
WP_003732594.1\|487829_488252_-	Rrf2 family transcriptional regulator	NA	NA	NA	NA
WP_003723700.1\|488400_489684_+	replication-associated recombination protein A	A0A127AWE7	Bacillus_phage	1.2e-112	50.7
WP_010990149.1\|490063_491212_+	cysteine desulfurase	H7BUW1	unidentified_phage	5.8e-34	38.1
WP_003723698.1\|491230_492346_+\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_012951642.1\|492463_493204_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_010990147.1\|493244_493883_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_012951641.1\|493910_496307_+	ATP-dependent RecD-like DNA helicase	A0A1P8DII4	Virus_Rctr197k	9.8e-44	32.6
WP_010990146.1\|496348_497788_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	5.0e-35	33.1
WP_003723693.1\|497784_498471_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.1e-35	35.1
WP_012951640.1\|498637_500143_+	ABC transporter permease	NA	NA	NA	NA
WP_012951639.1\|500151_500847_+	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_025370604.1\|501153_503793_+\|tRNA	alanine--tRNA ligase	A0A2K9L3D8	Tupanvirus	1.4e-67	33.8

DBSCAN-SWA_37

507558 : 508188

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722006.1\|507558_508188_+	uridine kinase	A0A2K9L178	Tupanvirus	7.3e-31	37.6

DBSCAN-SWA_38

519379 : 525695

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951630.1\|519379_519940_+	ComE operon protein 2	A0A127AWN5	Bacillus_phage	3.8e-31	57.5
WP_012951629.1\|519974_522197_+	DNA internalization-related competence protein ComEC/Rec2	Q332C0	Clostridium_botulinum_C_phage	4.8e-37	37.0
WP_012951628.1\|522264_523296_+	DNA polymerase III subunit delta	NA	NA	NA	NA
WP_003726526.1\|523381_523636_-	30S ribosomal protein S20	NA	NA	NA	NA
WP_003721987.1\|523868_525695_+	elongation factor 4	A0A1S5SF82	Streptococcus_phage	6.2e-22	23.9

DBSCAN-SWA_39

530399 : 537285

Catovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721980.1\|530399_532241_+	molecular chaperone DnaK	A0A1V0SAK3	Catovirus	6.2e-139	46.7
WP_010990134.1\|532382_533516_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.1e-26	27.2
WP_010990133.1\|533588_534533_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA
WP_012951624.1\|534533_535301_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA
WP_003719762.1\|535498_535672_+	30S ribosomal protein S21	NA	NA	NA	NA
WP_003736634.1\|535691_536138_+	GatB/YqeY domain-containing protein	G3MAQ0	Bacillus_virus	1.6e-16	38.5
WP_012951623.1\|536325_537285_+	PhoH family protein	L7TP00	Rhizobium_phage	1.5e-48	48.1

DBSCAN-SWA_40

547973 : 551073

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721961.1\|547973_549854_+	DNA primase	A0A0K1LMQ9	Caulobacter_phage	5.9e-60	36.4
WP_003721960.1\|549948_551073_+	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	8.4e-38	37.6

DBSCAN-SWA_41

554149 : 558223

Diachasmimorpha_longicaudata_entomopoxvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721956.1\|554149_555457_+	DEAD-box ATP-dependent RNA helicase CshB	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	4.8e-45	30.7
WP_012951618.1\|555471_556365_+	deoxyribonuclease IV	A0A2H4UU70	Bodo_saltans_virus	5.7e-21	32.7
WP_003727434.1\|556380_557307_+	manganese-dependent inorganic pyrophosphatase	NA	NA	NA	NA
WP_010990125.1\|557449_558223_+	metal ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.1e-15	28.6

DBSCAN-SWA_42

563964 : 564573

Bacillus_thuringiensis_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732335.1\|563964_564573_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	1.4e-68	58.6

DBSCAN-SWA_43

574085 : 578505

Tupanvirus(50.0%)

holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721936.1\|574085_575687_-	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.9e-51	26.5
WP_009926352.1\|575826_576210_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_012951614.1\|576458_577019_+	energy-coupled thiamine transporter ThiT	NA	NA	NA	NA
WP_003725371.1\|577311_578505_+\|holin	betaine/proline/choline family ABC transporter ATP-binding protein	F2Y1V5	Organic_Lake_phycodnavirus	3.2e-11	29.6

DBSCAN-SWA_44

598862 : 607321

Enterobacter_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721912.1\|598862_599609_-	pyruvate formate lyase-activating protein	E5DI79	Enterobacter_phage	2.5e-06	35.3
WP_003721911.1\|599685_601917_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	2.5e-182	43.4
WP_003721910.1\|602342_602891_-	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_012951605.1\|602907_604719_-	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	1.5e-73	34.6
WP_010990113.1\|604738_607321_-	DNA mismatch repair protein MutS	A0A1V0SC35	Catovirus	8.7e-38	24.9

DBSCAN-SWA_45

611092 : 612139

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732286.1\|611092_612139_-	recombinase RecA	A0A0S2MVG1	Bacillus_phage	6.0e-131	68.5

DBSCAN-SWA_46

617462 : 628488

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951601.1\|617462_618755_-	insulinase family protein	A0A1X9I714	Streptococcus_phage	2.5e-54	30.8
WP_003723916.1\|618872_619823_-	ABC transporter permease	NA	NA	NA	NA
WP_003723915.1\|619819_620872_-	ABC transporter permease	NA	NA	NA	NA
WP_003732280.1\|620864_622406_-	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	2.0e-13	29.3
WP_003722514.1\|622838_623912_-	BMP family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003722513.1\|624263_625103_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA
WP_012951599.1\|625136_627410_-	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	2.4e-84	48.0
WP_003727465.1\|627561_628488_-	YitT family protein	M1Q1P6	Streptococcus_phage	5.0e-28	31.0

DBSCAN-SWA_47

632879 : 636617

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003727467.1\|632879_634331_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	1.4e-24	27.7
WP_003719652.1\|634327_635008_-	response regulator transcription factor	W8CYM9	Bacillus_phage	8.7e-30	32.3
WP_003722503.1\|635198_636617_-	NADP-dependent phosphogluconate dehydrogenase	A0A0P0C6S9	Ostreococcus_lucimarinus_virus	3.5e-41	28.9

DBSCAN-SWA_48

650342 : 654068

Lactococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003719639.1\|650342_650543_-	cold-shock protein	Q9AZD3	Lactococcus_phage	1.3e-21	75.8
WP_003732268.1\|650741_651623_-	polyprenyl synthetase family protein	NA	NA	NA	NA
WP_003722489.1\|651625_651853_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA
WP_012951590.1\|651842_653195_-	exodeoxyribonuclease VII large subunit	A0A1B3AYB4	Gordonia_phage	2.7e-30	34.5
WP_003722487.1\|653213_654068_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	3.5e-36	40.9

DBSCAN-SWA_49

660628 : 663438

Prochlorococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722477.1\|660628_662095_-	glycine dehydrogenase subunit 2	E3ST28	Prochlorococcus_phage	2.1e-89	43.0
WP_012951589.1\|662091_663438_-	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	E3SN07	Prochlorococcus_phage	2.6e-62	39.0

DBSCAN-SWA_50

678859 : 754095

Streptococcus_phage(18.18%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951584.1\|678859_679804_-	bifunctional riboflavin kinase/FAD synthetase	A0A1V0SD03	Indivirus	1.8e-09	33.3
WP_012951583.1\|679873_680788_-\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_003719600.1\|680881_681226_-	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_003722457.1\|681242_681521_-	DUF503 domain-containing protein	NA	NA	NA	NA
WP_003732820.1\|681517_683863_-	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	3.0e-21	23.4
WP_003732819.1\|683885_684185_-	YlxQ family RNA-binding protein	NA	NA	NA	NA
WP_003722454.1\|684177_684462_-	YlxR family protein	NA	NA	NA	NA
WP_003722453.1\|684476_685595_-	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_003732818.1\|685624_686092_-	ribosome maturation factor RimP	NA	NA	NA	NA
WP_003732817.1\|686273_690608_-	DNA polymerase III subunit alpha	A0A0A7RWA3	Clostridium_phage	8.6e-22	35.1
WP_003732816.1\|690712_692419_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_003723454.1\|692458_693721_-\|protease	RIP metalloprotease RseP	NA	NA	NA	NA
WP_010989733.1\|693734_694877_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_003732813.1\|694891_695680_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_003732812.1\|695693_696452_-	isoprenyl transferase	R9W0U9	Flavobacterium_phage	4.4e-22	42.1
WP_003723450.1\|696681_697239_-	ribosome recycling factor	NA	NA	NA	NA
WP_003723449.1\|697238_697967_-	UMP kinase	NA	NA	NA	NA
WP_003723448.1\|698259_698634_+	hypothetical protein	NA	NA	NA	NA
WP_072217143.1\|698611_699817_+	helicase SNF2	L0P6E9	Lactobacillus_phage	3.7e-92	47.1
WP_003723446.1\|699806_701111_+	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	9.5e-134	52.1
WP_003723445.1\|701120_701627_+	ParB-like nuclease domain-containing protein	A0A220GKT8	Streptococcus_phage	4.0e-56	66.7
WP_003723443.1\|702398_703241_+	DUF2785 domain-containing protein	NA	NA	NA	NA
WP_003723442.1\|703291_703531_-	YneF family protein	NA	NA	NA	NA
WP_003732809.1\|703751_705746_-	transketolase	NA	NA	NA	NA
WP_003723440.1\|705892_706120_-	DUF896 domain-containing protein	NA	NA	NA	NA
WP_003723439.1\|706211_706541_-	cell division suppressor protein YneA	NA	NA	NA	NA
WP_003723438.1\|706698_707313_+	transcriptional repressor LexA	A0A1B2APZ1	Phage_Wrath	9.3e-15	62.1
WP_003723437.1\|707342_707864_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012951579.1\|707907_709203_-	arsenic transporter	A0A2H4PQU3	Staphylococcus_phage	2.8e-146	61.9
WP_003723435.1\|709346_710681_-	type I glutamate--ammonia ligase	A0A1V0SJ53	Klosneuvirus	2.0e-06	26.4
WP_003719570.1\|710751_711120_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_010989728.1\|711322_712549_-	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_003733804.1\|712541_713765_-	GTPase HflX	NA	NA	NA	NA
WP_003719566.1\|713875_714109_-	RNA chaperone Hfq	NA	NA	NA	NA
WP_012951578.1\|714231_715149_-\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_003723738.1\|715274_716951_-	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_012951577.1\|717183_717882_-	glycerophosphodiester phosphodiesterase	A0A0S2MYI4	Enterococcus_phage	9.9e-13	32.4
WP_012951576.1\|718094_719963_+	acetyltransferase	B5WZU0	Pseudomonas_phage	6.5e-43	31.9
WP_012951575.1\|719996_721793_-	class 1 internalin InlK	NA	NA	NA	NA
WP_012951574.1\|722124_723858_-	LapB repeat-containing protein	NA	NA	NA	NA
WP_009913867.1\|724184_724652_-	S-ribosylhomocysteine lyase	NA	NA	NA	NA
WP_010989723.1\|724734_727194_-	DNA topoisomerase IV subunit A	G3M9Z5	Bacillus_virus	4.7e-102	31.6
WP_003723731.1\|727190_729158_-	DNA topoisomerase IV subunit B	G3M9Z3	Bacillus_virus	6.7e-123	42.5
WP_003732802.1\|729338_729746_-	CoA-binding protein	NA	NA	NA	NA
WP_003724132.1\|729903_730500_+	glycerol-3-phosphate 1-O-acyltransferase PlsY	NA	NA	NA	NA
WP_009932949.1\|730541_731414_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_003724130.1\|731416_731728_-	hypothetical protein	NA	NA	NA	NA
WP_012951573.1\|731750_732170_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_003726695.1\|732272_733052_-	GTP-sensing pleiotropic transcriptional regulator CodY	NA	NA	NA	NA
WP_003732800.1\|733072_734482_-\|protease	ATP-dependent protease ATPase subunit HslU	W6AS21	Erwinia_phage	3.7e-43	28.7
WP_003724001.1\|734495_735035_-\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_009911635.1\|735055_735958_-	tyrosine recombinase XerC	A0A097EYL9	Mycobacterium_phage	1.2e-13	28.6
WP_009924616.1\|736240_737545_-\|tRNA	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	NA	NA	NA	NA
WP_012951572.1\|737607_739686_-	type I DNA topoisomerase	A0A1V0SB35	Catovirus	3.2e-107	37.5
WP_003723892.1\|739957_740818_-	DNA-protecting protein DprA	NA	NA	NA	NA
WP_003723891.1\|740951_741737_-	ribonuclease HII	G4YAY0	Emiliania_huxleyi_virus	3.0e-26	39.2
WP_003723890.1\|741733_742597_-	ribosome biogenesis GTPase YlqF	NA	NA	NA	NA
WP_003723889.1\|742606_743149_-	type I signal peptidase SipZ	NA	NA	NA	NA
WP_009924619.1\|743250_743820_-	type I signal peptidase SipY	NA	NA	NA	NA
WP_003723887.1\|743854_744421_-	type I signal peptidase SipX	NA	NA	NA	NA
WP_003723886.1\|744539_745799_-\|protease	ATP-dependent protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	1.4e-145	63.2
WP_003723884.1\|745983_747267_-	trigger factor	NA	NA	NA	NA
WP_003732796.1\|747381_748320_-	hypothetical protein	NA	NA	NA	NA
WP_003732795.1\|748581_749247_-	hypothetical protein	NA	NA	NA	NA
WP_010989719.1\|749264_749798_-\|protease	matrixin family metalloprotease	NA	NA	NA	NA
WP_003727524.1\|749916_750132_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003723563.1\|750282_750678_+	helix-turn-helix transcriptional regulator	A9D9J6	Lactobacillus_prophage	1.3e-14	57.4
WP_003723562.1\|750758_751898_+\|protease	PrsW family intramembrane metalloprotease	NA	NA	NA	NA
WP_003723561.1\|752033_752864_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	4.3e-47	42.4
WP_003723560.1\|752847_754095_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.2e-106	51.8

DBSCAN-SWA_51

765247 : 767675

Diachasmimorpha_longicaudata_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989717.1\|765247_766660_-	DEAD/DEAH box helicase	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	8.3e-51	31.8
WP_003723543.1\|766783_767044_+	hypothetical protein	NA	NA	NA	NA
WP_009924169.1\|767075_767675_-	histidine phosphatase family protein	A0A1X9IGJ2	Lactococcus_phage	5.8e-30	41.0

DBSCAN-SWA_52

771040 : 812640

Listeria_phage(97.62%)

protease,capsid,terminase,integrase,tail,holin,portal

attL 770754:770775|attR 812736:812757

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
770754:770775	attL	NA	NA	NA	NA
WP_012951563.1\|771040_771274_-	hypothetical protein	A8ATC5	Listeria_phage	1.6e-36	98.7
WP_012951561.1\|771714_771897_+	hypothetical protein	A0A059T7Z0	Listeria_phage	2.3e-22	96.6
WP_038406024.1\|772149_772449_-	STAS-like domain-containing protein	NA	NA	NA	NA
WP_120137519.1\|772442_773354_-	ATP-binding protein	J7KDG8	Streptococcus_phage	1.2e-31	30.1
WP_038406027.1\|773503_774349_-	peptidase M15	A0A059T7Y8	Listeria_phage	1.4e-133	85.2
WP_038406028.1\|774348_774615_-\|holin	phage holin	A0A059T684	Listeria_phage	1.5e-38	94.3
WP_012951557.1\|774614_774917_-	hypothetical protein	A0A059T5E6	Listeria_phage	1.7e-38	93.0
WP_038406029.1\|774964_776065_-	hypothetical protein	A0A059T7R4	Listeria_phage	1.1e-183	87.7
WP_038406030.1\|776054_778349_-	hypothetical protein	A0A059T7Y6	Listeria_phage	0.0e+00	95.9
WP_038406031.1\|778361_780011_-\|tail	phage tail protein	A0A059T682	Listeria_phage	0.0e+00	99.5
WP_038406033.1\|780007_784924_-\|tail	phage tail tape measure protein	A0A059T5F4	Listeria_phage	0.0e+00	95.7
WP_023548918.1\|785139_785472_-	hypothetical protein	A8ATA5	Listeria_phage	4.3e-51	97.3
WP_003731641.1\|785543_786131_-\|tail	phage tail protein	A8ATA4	Listeria_phage	9.9e-107	99.0
WP_003731642.1\|786152_786536_-	hypothetical protein	A8ATA3	Listeria_phage	8.5e-67	99.2
WP_003731643.1\|786532_786934_-	hypothetical protein	A8ATA2	Listeria_phage	2.1e-68	100.0
WP_003731644.1\|786930_787296_-	hypothetical protein	A8ATA1	Listeria_phage	1.3e-64	100.0
WP_003731645.1\|787279_787579_-	hypothetical protein	A8ATA0	Listeria_phage	5.3e-48	100.0
WP_038406034.1\|787765_788917_-\|capsid	phage major capsid protein	A0A059T678	Listeria_phage	2.3e-200	93.2
WP_023548924.1\|788943_789741_-\|protease	Clp protease ClpP	A0A059T5F2	Listeria_phage	1.2e-136	95.1
WP_023552368.1\|789737_790868_-\|portal	phage portal protein	A8AT96	Listeria_phage	2.2e-203	93.1
WP_023552366.1\|790879_792523_-\|terminase	terminase large subunit	A8AT95	Listeria_phage	0.0e+00	98.7
WP_031646261.1\|792519_792876_-	hypothetical protein	A8AT94	Listeria_phage	2.6e-46	98.0
WP_038406036.1\|792924_793239_-	HNH endonuclease	A8ATF8	Listeria_phage	1.5e-56	98.1
WP_012951542.1\|793734_794478_-	DUF559 domain-containing protein	NA	NA	NA	NA
WP_003731654.1\|794575_795001_-	DUF722 domain-containing protein	A0A059T6H4	Listeria_phage	1.8e-73	99.3
WP_003731655.1\|795013_795241_-	hypothetical protein	NA	NA	NA	NA
WP_038406037.1\|795485_795755_-	hypothetical protein	NA	NA	NA	NA
WP_038406038.1\|795751_796291_-	DUF3310 domain-containing protein	A8ATF5	Listeria_phage	4.9e-76	78.9
WP_020830767.1\|796738_796951_-	hypothetical protein	NA	NA	NA	NA
WP_012951539.1\|796952_797270_-	VRR-NUC domain-containing protein	A8ATF4	Listeria_phage	7.3e-48	89.3
WP_038406039.1\|797597_799871_-	DNA primase	R4IBW2	Listeria_phage	0.0e+00	95.8
WP_023553839.1\|799893_800379_-	DUF669 domain-containing protein	R4ICE5	Listeria_phage	1.1e-87	98.8
WP_074471730.1\|800403_801645_-	DEAD/DEAH box helicase	A8ATF1	Listeria_phage	1.2e-213	96.1
WP_012951536.1\|801723_802413_-	AAA family ATPase	R4IDY8	Listeria_phage	3.1e-128	96.9
WP_003731665.1\|802432_802912_-	siphovirus Gp157 family protein	R4IBM0	Listeria_phage	7.6e-57	76.7
WP_012951535.1\|802913_803297_-	hypothetical protein	A8ATE8	Listeria_phage	5.3e-61	92.9
WP_038406040.1\|803463_803643_-	hypothetical protein	A8ATE3	Listeria_phage	1.2e-18	78.0
WP_038406041.1\|803639_804083_-	hypothetical protein	NA	NA	NA	NA
WP_012951528.1\|804085_804319_-	DUF1642 domain-containing protein	B6D7L5	Listeria_phage	6.8e-11	55.6
WP_012951527.1\|804315_804996_-	hypothetical protein	A8ATD7	Listeria_phage	9.0e-120	95.6
WP_012951526.1\|805008_805953_-\|integrase	site-specific integrase	A8ATD6	Listeria_phage	1.1e-176	97.8
WP_038406042.1\|805963_806677_-	SAM-dependent DNA methyltransferase	A8ATD5	Listeria_phage	9.1e-131	98.3
WP_158423219.1\|806890_807103_+	hypothetical protein	NA	NA	NA	NA
WP_038406044.1\|807478_807664_-	hypothetical protein	A0A059T7Z3	Listeria_phage	3.9e-25	86.9
WP_038406045.1\|807666_807909_-	hypothetical protein	A8ATD2	Listeria_phage	4.3e-40	92.5
WP_003730995.1\|807930_808122_-	helix-turn-helix transcriptional regulator	A0A059T5F8	Listeria_phage	5.4e-22	87.1
WP_009931099.1\|808136_808460_-	hypothetical protein	NA	NA	NA	NA
WP_031660120.1\|808528_809125_+	hypothetical protein	NA	NA	NA	NA
WP_049963070.1\|809199_809382_-	hypothetical protein	NA	NA	NA	NA
WP_012951519.1\|809650_809974_+	helix-turn-helix transcriptional regulator	R4IDX0	Listeria_phage	6.3e-39	75.7
WP_026747145.1\|809990_810443_+	ImmA/IrrE family metallo-endopeptidase	R4IBK9	Listeria_phage	9.1e-76	87.3
WP_014930257.1\|810494_811358_+	hypothetical protein	NA	NA	NA	NA
WP_012951516.1\|811485_812640_+\|integrase	site-specific integrase	A0A059T688	Listeria_phage	1.6e-209	95.8
812736:812757	attR	NA	NA	NA	NA

DBSCAN-SWA_53

819648 : 826823

Staphylococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723853.1\|819648_819960_-	thioredoxin	A0A1X9I9P5	Staphylococcus_phage	5.4e-19	39.6
WP_010989713.1\|820040_822398_-	endonuclease MutS2	Q94M10	Lactobacillus_phage	1.0e-21	50.4
WP_003723851.1\|822420_824133_-	DNA polymerase/3'-5' exonuclease PolX	A0A2H4UV14	Bodo_saltans_virus	5.1e-18	24.8
WP_012951513.1\|824225_824768_-	CvpA family protein	NA	NA	NA	NA
WP_003740576.1\|824767_825031_-	cell division protein ZapA	NA	NA	NA	NA
WP_072215733.1\|825184_826111_+	ribonuclease HIII	NA	NA	NA	NA
WP_003732773.1\|826148_826823_-	uracil-DNA glycosylase	A0A172DS90	Canid_alphaherpesvirus	7.5e-50	47.7

DBSCAN-SWA_54

834119 : 838442

Planktothrix_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721621.1\|834119_834821_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.0e-33	35.8
WP_012951511.1\|834981_837390_-\|tRNA	phenylalanine--tRNA ligase subunit beta	NA	NA	NA	NA
WP_003736387.1\|837389_838442_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	1.3e-29	34.9

DBSCAN-SWA_55

841668 : 845587

Clostridium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989709.1\|841668_842655_-	GW domain-containing glycosaminoglycan-binding protein	A0A0A7RU71	Clostridium_phage	1.1e-25	42.8
WP_003734016.1\|842951_843821_-	GW domain-containing glycosaminoglycan-binding protein	S5M633	Brevibacillus_phage	8.5e-38	51.6
WP_003721612.1\|844160_844712_-	DUF2812 domain-containing protein	NA	NA	NA	NA
WP_003724743.1\|844714_845026_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_012951510.1\|845056_845587_-	AAA family ATPase	A0A097BYE2	Leuconostoc_phage	2.9e-09	35.3

DBSCAN-SWA_56

848715 : 849522

Erysipelothrix_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721605.1\|848715_849522_-	ATP-binding cassette domain-containing protein	A0A2I4R674	Erysipelothrix_phage	2.0e-09	28.3

DBSCAN-SWA_57

906472 : 907045

Salicola_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721539.1\|906472_907045_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A248SJ97	Salicola_phage	4.7e-29	37.6

DBSCAN-SWA_58

911602 : 914966

Bodo_saltans_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009932493.1\|911602_913249_-	ABC transporter ATP-binding protein	A0A2H4UU96	Bodo_saltans_virus	1.6e-16	28.6
WP_012951476.1\|913250_914966_-	ABC transporter ATP-binding protein/permease	W8CYL7	Bacillus_phage	2.3e-18	23.2

DBSCAN-SWA_59

934179 : 943732

Hokovirus(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951455.1\|934179_936093_-	site-specific DNA-methyltransferase	A0A2K5B2C1	Erysipelothrix_phage	1.3e-59	36.9
WP_012951454.1\|936310_937867_-	glutamine-hydrolyzing GMP synthase	A0A1V0SH76	Hokovirus	3.0e-17	28.1
WP_003730540.1\|937995_938400_-	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_012951453.1\|938459_938768_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_003727000.1\|938780_939605_-	ammonia-dependent NAD(+) synthetase	G3MA24	Bacillus_virus	9.7e-68	52.6
WP_003721509.1\|939616_941107_-	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	9.5e-114	49.7
WP_010989660.1\|941315_942329_-	glycosyltransferase	A0A1V0SAH6	Catovirus	7.9e-11	32.0
WP_003732709.1\|942343_943327_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	4.1e-12	34.6
WP_003721506.1\|943348_943732_-	glycerol-3-phosphate cytidylyltransferase	A0A1V0SGE7	Hokovirus	1.4e-16	40.7

DBSCAN-SWA_60

949731 : 952164

Enterobacteria_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721500.1\|949731_950718_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	4.7e-77	46.8
WP_003721499.1\|950718_951279_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.1e-38	44.8
WP_003721498.1\|951297_952164_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	7.5e-103	62.5

DBSCAN-SWA_61

957233 : 962948

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721495.1\|957233_958106_+	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	4.5e-79	50.2
WP_003721494.1\|958147_959836_-	glycosyl transferase group 2	NA	NA	NA	NA
WP_003732702.1\|960051_961770_-	GW domain-containing glycosaminoglycan-binding protein	Q9ZXE4	Bacillus_phage	4.3e-17	44.1
WP_003722702.1\|961946_962948_-	teichoic acids export ABC transporter ATP-binding subunit TagH	A0A2H4PQG7	Staphylococcus_phage	2.1e-16	27.4

DBSCAN-SWA_62

972006 : 984988

Streptococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722695.1\|972006_973845_-	translational GTPase TypA	A0A1S5SF82	Streptococcus_phage	7.3e-23	24.2
WP_003722694.1\|974036_974810_-	inositol monophosphatase family protein	NA	NA	NA	NA
WP_003722693.1\|974940_975555_+	YktB family protein	NA	NA	NA	NA
WP_003722692.1\|975755_976700_+	magnesium transporter CorA family protein	NA	NA	NA	NA
WP_003722690.1\|976766_977435_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-25	32.0
WP_012951447.1\|977447_978869_-	ABC transporter permease	NA	NA	NA	NA
WP_003734007.1\|978955_980401_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_003722687.1\|980375_981038_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.8e-33	35.7
WP_003722686.1\|981179_981710_-	DsbA family protein	NA	NA	NA	NA
WP_003722685.1\|981731_982004_-	hypothetical protein	NA	NA	NA	NA
WP_012951446.1\|982003_982957_-	malate dehydrogenase	NA	NA	NA	NA
WP_003732693.1\|983085_983397_-	hypothetical protein	NA	NA	NA	NA
WP_003722682.1\|983584_984988_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	2.3e-48	30.1

DBSCAN-SWA_63

989666 : 990218

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722677.1\|989666_990218_+	peptide deformylase	E3SLL2	Synechococcus_phage	1.1e-14	35.7

DBSCAN-SWA_64

997991 : 998654

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722664.1\|997991_998654_+	ATP-binding cassette domain-containing protein	G3M9Y6	Bacillus_virus	4.6e-20	30.1

DBSCAN-SWA_65

1005694 : 1009230

Micromonas_pusilla_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722656.1\|1005694_1006519_-	transketolase	G9E5U1	Micromonas_pusilla_virus	5.2e-13	31.4
WP_012951439.1\|1006534_1007938_-	L-fucose/L-arabinose isomerase family protein	NA	NA	NA	NA
WP_010989641.1\|1008201_1009230_+	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	2.9e-05	22.3

DBSCAN-SWA_66

1022793 : 1023987

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722878.1\|1022793_1023987_-	glycine betaine/L-proline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.6e-29	36.3

DBSCAN-SWA_67

1038761 : 1041431

Enterobacteria_phage(50.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951433.1\|1038761_1040936_+\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	4.5e-128	41.5
WP_003722861.1\|1040951_1041431_-	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	1.7e-19	50.5

DBSCAN-SWA_68

1044505 : 1051778

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732442.1\|1044505_1045273_-	TerC family protein	A0A068EP98	Bacillus_phage	9.2e-28	38.5
WP_003722856.1\|1045375_1046143_-	TerC family protein	A0A068EP98	Bacillus_phage	2.6e-30	40.7
WP_012951432.1\|1046424_1047786_-	MATE family efflux transporter	NA	NA	NA	NA
WP_003732440.1\|1047837_1048263_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_003722853.1\|1048369_1049938_-	peptide chain release factor 3	A0A1S5SF82	Streptococcus_phage	2.1e-31	27.5
WP_003732439.1\|1050019_1050874_-	ABC transporter permease	NA	NA	NA	NA
WP_003732438.1\|1050866_1051778_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	7.3e-24	28.6

DBSCAN-SWA_69

1056730 : 1057495

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009931919.1\|1056730_1057495_-	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.5e-22	30.9

DBSCAN-SWA_70

1061241 : 1063955

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732429.1\|1061241_1062774_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9KZV5	Tupanvirus	1.0e-46	29.5
WP_003722795.1\|1062770_1063955_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	A0A125RNP0	Pseudomonas_phage	4.1e-19	28.3

DBSCAN-SWA_71

1072683 : 1073910

Phage_TP(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951425.1\|1072683_1073910_-	U32 family peptidase	Q6DW11	Phage_TP	8.6e-44	32.3

DBSCAN-SWA_72

1086502 : 1090759

Clostridium_botulinum_C_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732419.1\|1086502_1087633_-	MBL fold metallo-hydrolase	Q332C0	Clostridium_botulinum_C_phage	3.3e-42	37.6
WP_003722764.1\|1087745_1088048_-	hypothetical protein	NA	NA	NA	NA
WP_003719147.1\|1088280_1088751_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_012951420.1\|1088953_1090759_+	HSP90 family protein	A0A1V0SHA7	Hokovirus	1.1e-15	29.6

DBSCAN-SWA_73

1097313 : 1098261

Salmonella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722755.1\|1097313_1098261_+	glycosyltransferase family 2 protein	A0A2H5BFL1	Salmonella_phage	1.9e-59	39.0

DBSCAN-SWA_74

1102554 : 1107063

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722749.1\|1102554_1104516_+	LTA synthase family protein	W6LM83	Streptococcus_phage	4.0e-136	45.2
WP_003734004.1\|1104546_1105203_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003733783.1\|1105225_1106341_-	ABC transporter permease	NA	NA	NA	NA
WP_012951409.1\|1106340_1107063_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	3.4e-24	31.0

DBSCAN-SWA_75

1110208 : 1111780

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025370553.1\|1110208_1111780_-	ABC-F type ribosomal protection protein	A0A1B0RXA0	Streptococcus_phage	7.3e-64	34.6

DBSCAN-SWA_76

1125698 : 1126196

Pseudomonas_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721473.1\|1125698_1126196_-	hypothetical protein	A0A1Y0SYU1	Pseudomonas_phage	7.5e-07	31.0

DBSCAN-SWA_77

1133929 : 1137141

uncultured_Caudovirales_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732387.1\|1133929_1135555_-	SulP family inorganic anion transporter	A0A2H4J153	uncultured_Caudovirales_phage	8.4e-47	27.5
WP_012951400.1\|1135761_1136361_-	SpoIIE family protein phosphatase	NA	NA	NA	NA
WP_003721462.1\|1136361_1137141_-	RNA polymerase sigma factor SigB	A0A0A0RV91	Bacillus_phage	4.3e-25	34.6

DBSCAN-SWA_78

1140953 : 1144651

Lactobacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003743775.1\|1140953_1141301_-	type II toxin-antitoxin system PemK/MazF family toxin	A0A1S5RCS0	Lactobacillus_phage	9.9e-14	40.4
WP_003721454.1\|1141304_1141583_-	CopG family ribbon-helix-helix protein	NA	NA	NA	NA
WP_012951399.1\|1141788_1142895_-	alanine racemase	A0A0P0YM39	Yellowstone_lake_mimivirus	4.1e-37	30.5
WP_003721452.1\|1142913_1143270_-	holo-ACP synthase	NA	NA	NA	NA
WP_010989606.1\|1143271_1144651_-	protoporphyrinogen oxidase	A0A2K9L6U6	Tupanvirus	2.4e-10	23.8

DBSCAN-SWA_79

1160287 : 1163975

Diachasmimorpha_longicaudata_entomopoxvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732374.1\|1160287_1161850_-	ATP-dependent RNA helicase CshA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	7.0e-67	37.4
WP_026745098.1\|1162301_1163975_-	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	2.0e-120	42.1

DBSCAN-SWA_80

1180206 : 1184848

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003724779.1\|1180206_1180935_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-30	38.3
WP_009917534.1\|1180927_1182370_-	ABC transporter permease subunit	NA	NA	NA	NA
WP_003721411.1\|1182539_1183640_-	excinuclease ABC subunit C	NA	NA	NA	NA
WP_009930625.1\|1183744_1184848_-	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase	A0A218MNE0	uncultured_virus	1.9e-98	49.5

DBSCAN-SWA_81

1192560 : 1195203

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721406.1\|1192560_1195203_-	cation-translocating P-type ATPase	M1HJQ2	Paramecium_bursaria_Chlorella_virus	2.4e-91	29.8

DBSCAN-SWA_82

1199018 : 1200689

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072215871.1\|1199018_1200689_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.9e-57	29.5

DBSCAN-SWA_83

1217665 : 1223855

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009924976.1\|1217665_1218490_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	5.5e-71	50.0
WP_003721389.1\|1218610_1219000_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_012951379.1\|1219015_1219678_-	DUF3153 domain-containing protein	NA	NA	NA	NA
WP_010989584.1\|1219694_1220252_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_012951378.1\|1220361_1221210_-	hypothetical protein	NA	NA	NA	NA
WP_010989583.1\|1221224_1223855_-	cation-translocating P-type ATPase	M1I547	Acanthocystis_turfacea_Chlorella_virus	9.3e-80	29.5

DBSCAN-SWA_84

1231864 : 1232959

Mycoplasma_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072215848.1\|1231864_1232959_-	ABC transporter ATP-binding protein	Q6GZ03	Mycoplasma_phage	3.0e-40	45.8

DBSCAN-SWA_85

1265334 : 1266264

Catovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989568.1\|1265334_1266264_-	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	3.2e-19	28.2

DBSCAN-SWA_86

1283457 : 1284363

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009925081.1\|1283457_1284363_-	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.2e-37	38.6

DBSCAN-SWA_87

1288559 : 1296620

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721866.1\|1288559_1288766_-	helix-turn-helix transcriptional regulator	A0A1V0E021	Clostridioides_phage	2.5e-09	50.9
WP_012951362.1\|1288762_1289050_-	hypothetical protein	NA	NA	NA	NA
WP_003733767.1\|1289156_1289498_-	hypothetical protein	NA	NA	NA	NA
WP_003733766.1\|1289561_1289861_+	hypothetical protein	NA	NA	NA	NA
WP_003732907.1\|1290011_1290515_-	hypothetical protein	NA	NA	NA	NA
WP_012951361.1\|1290543_1292544_-	ABC transporter ATP-binding protein/permease	G9BWD6	Planktothrix_phage	4.4e-29	38.4
WP_010989555.1\|1292558_1293263_-	hypothetical protein	NA	NA	NA	NA
WP_009925969.1\|1293259_1293949_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.4e-05	24.4
WP_003721861.1\|1293932_1294310_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_010989554.1\|1294573_1295233_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003732903.1\|1295246_1296620_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	6.9e-26	23.7

DBSCAN-SWA_88

1301952 : 1302462

uncultured_Caudovirales_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721853.1\|1301952_1302462_-	helix-turn-helix transcriptional regulator	A0A2H4J4N8	uncultured_Caudovirales_phage	6.5e-06	46.7

DBSCAN-SWA_89

1307716 : 1317723

Paramecium_bursaria_Chlorella_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025370547.1\|1307716_1309522_-	glutamine--fructose-6-phosphate transaminase (isomerizing)	M1HQK2	Paramecium_bursaria_Chlorella_virus	5.2e-98	38.6
WP_003721846.1\|1309968_1310181_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA
WP_003721845.1\|1310223_1310952_-	hypothetical protein	NA	NA	NA	NA
WP_003721844.1\|1310964_1312770_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-08	20.9
WP_010989552.1\|1312931_1314662_-	pyruvate oxidase	H8ZJ31	Ostreococcus_tauri_virus	6.5e-13	22.4
WP_010989551.1\|1314932_1315580_+	elongation factor G-binding protein	NA	NA	NA	NA
WP_003721841.1\|1315625_1315949_-	DUF1048 domain-containing protein	NA	NA	NA	NA
WP_003721840.1\|1315948_1316275_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_010989550.1\|1316396_1317041_-	hypothetical protein	NA	NA	NA	NA
WP_003721838.1\|1317054_1317723_-	lytic transglycosylase domain-containing protein	A0A0H3V0Q1	Geobacillus_virus	2.9e-30	55.6

DBSCAN-SWA_90

1339867 : 1344437

Bacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721812.1\|1339867_1340227_-	response regulator	W8CYM9	Bacillus_phage	7.6e-09	36.9
WP_003721811.1\|1340501_1341365_-	FliC/FljB family flagellin	NA	NA	NA	NA
WP_003721810.1\|1341602_1342511_-	chemotaxis protein CheV	Q56AR1	Bacillus_thuringiensis_phage	2.6e-45	34.7
WP_012951346.1\|1342523_1344437_-	glycosyltransferase	A0A1V0SEC5	Indivirus	2.9e-06	25.8

DBSCAN-SWA_91

1358969 : 1361810

Diadromus_pulchellus_ascovirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023549204.1\|1358969_1359854_-	SDR family oxidoreductase	F2NZ40	Diadromus_pulchellus_ascovirus	8.9e-59	44.0
WP_003721786.1\|1360111_1360882_-	ABC transporter permease	NA	NA	NA	NA
WP_003721785.1\|1360874_1361810_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	4.4e-24	30.3

DBSCAN-SWA_92

1368671 : 1369379

Enterococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951342.1\|1368671_1369379_-	serine/threonine protein phosphatase	A0A249Y183	Enterococcus_phage	2.5e-19	27.8

DBSCAN-SWA_93

1379359 : 1384717

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072215777.1\|1379359_1381180_+	LTA synthase family protein	W6LM83	Streptococcus_phage	2.9e-48	28.6
WP_012951340.1\|1381219_1381870_-	hypothetical protein	A0A0E3HJ81	Synechococcus_phage	3.4e-15	27.6
WP_003722841.1\|1382012_1382741_-	hypothetical protein	NA	NA	NA	NA
WP_012951339.1\|1382836_1384717_-	heavy metal translocating P-type ATPase	E4ZFI9	Streptococcus_phage	1.7e-107	38.5

DBSCAN-SWA_94

1406620 : 1413892

Oenococcus_phage(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951289.1\|1406620_1407361_-	sulfite exporter TauE/SafE family protein	Q6A1Z9	Oenococcus_phage	4.5e-16	31.9
WP_003722816.1\|1407457_1407850_-	DUF1398 family protein	NA	NA	NA	NA
WP_003722815.1\|1407905_1408361_-	hypothetical protein	NA	NA	NA	NA
WP_010989529.1\|1408467_1409610_+	serine/threonine protein kinase	G9BWE0	Planktothrix_phage	2.0e-15	31.6
WP_003722813.1\|1409689_1410184_+	DUF5067 domain-containing protein	NA	NA	NA	NA
WP_012951288.1\|1410224_1411976_-	glycerophosphodiester phosphodiesterase	M1HJV8	Acanthocystis_turfacea_Chlorella_virus	5.2e-10	25.3
WP_003722811.1\|1412082_1412325_+	hypothetical protein	NA	NA	NA	NA
WP_009911193.1\|1412321_1412855_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003722809.1\|1412950_1413892_-	NADP-dependent oxidoreductase	A0A2P1EIJ9	Megavirus	3.2e-06	25.2

DBSCAN-SWA_95

1417528 : 1421067

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732630.1\|1417528_1419346_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.1e-58	28.7
WP_012951286.1\|1419342_1421067_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.8e-46	27.5

DBSCAN-SWA_96

1429215 : 1430493

Pandoravirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723401.1\|1429215_1430493_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	A0A0B5JD48	Pandoravirus	4.0e-12	26.7

DBSCAN-SWA_97

1436442 : 1437846

Megavirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951279.1\|1436442_1437846_-	deoxyribodipyrimidine photo-lyase	K7Y8W8	Megavirus	1.6e-62	33.0

DBSCAN-SWA_98

1446549 : 1450182

Clostridioides_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072215780.1\|1446549_1447992_+	invasion associated endopeptidase	A0A1V0DZX6	Clostridioides_phage	1.1e-18	50.0
WP_012951274.1\|1448079_1449264_+	class I SAM-dependent rRNA methyltransferase	W6LLI2	Streptococcus_phage	8.4e-81	44.6
WP_003732650.1\|1449294_1449951_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_009925352.1\|1449972_1450182_-	hypothetical protein	A0A172JI00	Bacillus_phage	1.2e-14	53.0

DBSCAN-SWA_99

1455999 : 1458740

Moraxella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721367.1\|1455999_1457295_+	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	4.8e-53	32.4
WP_012951272.1\|1457335_1458367_-	nucleoid-associated protein	NA	NA	NA	NA
WP_003732653.1\|1458443_1458740_+	MGMT family protein	M1PFU9	Streptococcus_phage	4.5e-07	34.0

DBSCAN-SWA_100

1465457 : 1465775

Bodo_saltans_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721356.1\|1465457_1465775_+	phosphoribosyl-AMP cyclohydrolase	A0A2H4UVM0	Bodo_saltans_virus	5.8e-13	38.1

DBSCAN-SWA_101

1471917 : 1473396

Acinetobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732659.1\|1471917_1473396_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	1.2e-79	40.1

DBSCAN-SWA_102

1486844 : 1488038

Mycobacterium_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951264.1\|1486844_1488038_-	serine hydrolase	G1BSP8	Mycobacterium_virus	3.9e-09	22.8

DBSCAN-SWA_103

1505143 : 1506475

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733179.1\|1505143_1506475_-	DUF1254 domain-containing protein	M1I2Z8	Paramecium_bursaria_Chlorella_virus	6.2e-40	29.0

DBSCAN-SWA_104

1512622 : 1516374

Listeria_phage(50.0%)

integrase

attL 1503199:1503213|attR 1522844:1522858

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1503199:1503213	attL	NA	NA	NA	NA
WP_012951257.1\|1512622_1513552_+\|integrase	site-specific integrase	A8ATM2	Listeria_phage	3.3e-80	47.8
WP_031673293.1\|1513594_1514788_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_012951255.1\|1514784_1516374_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	7.8e-98	40.2
1522844:1522858	attR	NA	NA	NA	NA

DBSCAN-SWA_105

1531516 : 1532452

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733190.1\|1531516_1532452_-	ribose-phosphate pyrophosphokinase	A0A1V0SHF7	Hokovirus	1.7e-39	32.3

DBSCAN-SWA_106

1536800 : 1540226

Tetraselmis_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951244.1\|1536800_1537403_-	SIS domain-containing protein	A0A2P0VNK5	Tetraselmis_virus	2.0e-14	24.2
WP_003733193.1\|1537406_1539467_-	BglG family transcription antiterminator	NA	NA	NA	NA
WP_012951243.1\|1539575_1540226_-	transaldolase	A0A0C5AMY8	Cyanophage	2.1e-17	29.7

DBSCAN-SWA_107

1552132 : 1553791

Lactobacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989491.1\|1552132_1553026_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	3.6e-07	24.0
WP_009932174.1\|1553062_1553791_-	NUDIX hydrolase	G3MA14	Bacillus_virus	2.4e-25	34.9

DBSCAN-SWA_108

1573403 : 1574351

Acidianus_two-tailed_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012581921.1\|1573403_1574351_+	MoxR family ATPase	A0A1C9EGB9	Acidianus_two-tailed_virus	3.2e-06	27.8

DBSCAN-SWA_109

1602363 : 1603110

Chrysochromulina_ericina_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951220.1\|1602363_1603110_-	SDR family oxidoreductase	A0A0N9R355	Chrysochromulina_ericina_virus	2.1e-05	26.0

DBSCAN-SWA_110

1616239 : 1616539

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722968.1\|1616239_1616539_+	hypothetical protein	G3MBF7	Bacillus_virus	1.4e-27	63.4

DBSCAN-SWA_111

1621470 : 1624074

Hokovirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951209.1\|1621470_1624074_+	phosphoenolpyruvate synthase	A0A1V0SGR7	Hokovirus	2.5e-40	31.2

DBSCAN-SWA_112

1638736 : 1642121

Bacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723106.1\|1638736_1639420_-	SH3 domain-containing protein	A7KUS1	Bacillus_phage	3.6e-07	34.7
WP_003723105.1\|1639563_1640013_-	hypothetical protein	NA	NA	NA	NA
WP_003723104.1\|1640047_1640992_-	flotillin-like protein FloA	NA	NA	NA	NA
WP_003738085.1\|1640988_1641288_-	hypothetical protein	NA	NA	NA	NA
WP_025370536.1\|1641455_1642121_-	uracil-DNA glycosylase	A0A2K9QQR6	Equid_alphaherpesvirus	1.6e-49	47.5

DBSCAN-SWA_113

1653679 : 1654600

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951194.1\|1653679_1654600_+	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	1.8e-06	27.1

DBSCAN-SWA_114

1671107 : 1672628

Lactobacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723206.1\|1671107_1672628_-	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	5.3e-51	31.9

DBSCAN-SWA_115

1680857 : 1681514

Synechococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723193.1\|1680857_1681514_+	fructose-6-phosphate aldolase	A0A0E3HJ81	Synechococcus_phage	2.6e-47	46.7

DBSCAN-SWA_116

1724191 : 1748738

Bacillus_phage(27.27%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989403.1\|1724191_1725694_-	PDZ domain-containing protein	W5SAB9	Pithovirus	4.7e-12	32.6
WP_010989402.1\|1725791_1726622_-	MBL fold metallo-hydrolase	A0A0A0RVF5	Bacillus_phage	8.4e-19	29.0
WP_003722910.1\|1726741_1727581_-	hypothetical protein	NA	NA	NA	NA
WP_003722909.1\|1727583_1728906_-	transcriptional regulator	NA	NA	NA	NA
WP_003722908.1\|1728902_1730735_-	cell wall metabolism sensor histidine kinase WalK	W8CYF6	Bacillus_phage	4.1e-34	33.3
WP_003722907.1\|1730919_1731633_-	response regulator transcription factor	W8CYM9	Bacillus_phage	2.6e-45	41.4
WP_012951156.1\|1731845_1733027_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003722905.1\|1733408_1734230_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003722904.1\|1734244_1735261_+	methionine ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.3e-29	38.4
WP_003722903.1\|1735257_1735920_+	ABC transporter permease	NA	NA	NA	NA
WP_012582042.1\|1736009_1736789_+	carbon-nitrogen family hydrolase	M1I0W4	Acanthocystis_turfacea_Chlorella_virus	2.7e-11	25.5
WP_012951154.1\|1736950_1737622_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003722900.1\|1737879_1738431_-	anaerobic ribonucleoside-triphosphate reductase activating protein	A0A0C5K925	Enterococcus_phage	3.3e-56	60.8
WP_012951153.1\|1738423_1740574_-	anaerobic ribonucleoside-triphosphate reductase	A0A0C5KKX3	Enterococcus_phage	3.6e-263	63.2
WP_003732853.1\|1740864_1741965_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	Q6GZ03	Mycoplasma_phage	5.0e-19	40.6
WP_009924288.1\|1742003_1742975_-	Gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA
WP_012951151.1\|1743091_1743913_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003722895.1\|1743929_1744772_+	MBL fold metallo-hydrolase	Q0H255	Geobacillus_phage	1.5e-87	63.1
WP_009924286.1\|1745030_1745693_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_012951150.1\|1745729_1746233_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_003729164.1\|1746368_1747181_+	sugar-phosphatase	NA	NA	NA	NA
WP_003722891.1\|1747301_1748738_+	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	5.3e-53	31.2

DBSCAN-SWA_117

1764163 : 1771494

Aureococcus_anophage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732839.1\|1764163_1767769_-	DNA-directed RNA polymerase subunit beta'	A0A076FGB9	Aureococcus_anophage	9.9e-56	25.4
WP_003723045.1\|1767939_1771494_-	DNA-directed RNA polymerase subunit beta	A0A1B1ISA9	uncultured_Mediterranean_phage	2.6e-48	23.5

DBSCAN-SWA_118

1778756 : 1781075

Enterobacteria_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951134.1\|1778756_1779752_-	LacI family transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.7e-21	27.9
WP_012951133.1\|1779896_1781075_-	RNA-splicing ligase RtcB	X2JMN6	Bacillus_phage	1.3e-118	55.1

DBSCAN-SWA_119

1785470 : 1790371

Bacillus_virus(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003726896.1\|1785470_1786004_-	transcription termination/antitermination protein NusG	G3MAW2	Bacillus_virus	2.0e-13	32.1
WP_003728078.1\|1786133_1786313_-	preprotein translocase subunit SecE	NA	NA	NA	NA
WP_003728079.1\|1786332_1786482_-	50S ribosomal protein L33	NA	NA	NA	NA
WP_003732831.1\|1786585_1787191_-	RNA polymerase sporulation sigma factor SigH	NA	NA	NA	NA
WP_003724086.1\|1787271_1787784_-	NYN domain-containing protein	NA	NA	NA	NA
WP_003724085.1\|1787786_1788542_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA
WP_003732830.1\|1788541_1788952_-	Mini-ribonuclease 3	NA	NA	NA	NA
WP_012951130.1\|1788955_1790371_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.2e-52	30.8

DBSCAN-SWA_120

1796793 : 1799256

Enterobacteria_phage(100.0%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723897.1\|1796793_1799256_-\|protease	ATP-dependent Clp protease ATP-binding subunit	H6X3M6	Enterobacteria_phage	7.3e-127	38.7

DBSCAN-SWA_121

1812829 : 1814326

Catovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989378.1\|1812829_1814326_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.1e-92	40.4

DBSCAN-SWA_122

1817879 : 1825084

Streptococcus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723745.1\|1817879_1818806_-	cysteine synthase A	A0A1X9I5F1	Streptococcus_phage	2.1e-119	69.5
WP_003723744.1\|1818921_1819806_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_012952050.1\|1819821_1820601_-	type III pantothenate kinase	NA	NA	NA	NA
WP_003733155.1\|1820716_1822792_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	G8DDJ2	Micromonas_pusilla_virus	3.6e-111	47.7
WP_003723741.1\|1823137_1825084_-\|tRNA	bifunctional tRNA lysidine(34) synthetase TilS/hypoxanthine phosphoribosyltransferase HprT	A0A2K9L634	Tupanvirus	2.6e-10	24.5

DBSCAN-SWA_123

1835977 : 1836310

Rhodobacter_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003725735.1\|1835977_1836310_+	putative heavy metal-binding protein	M4STD1	Rhodobacter_phage	5.7e-11	43.5

DBSCAN-SWA_124

1846048 : 1848429

Tupanvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722728.1\|1846048_1847005_-	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	3.3e-43	35.5
WP_003722727.1\|1847055_1848429_-	bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU	A0A0G2Y8M0	Acanthamoeba_polyphaga_mimivirus	3.5e-30	36.5

DBSCAN-SWA_125

1851440 : 1853852

Planktothrix_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722723.1\|1851440_1852133_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.2e-32	39.7
WP_003722722.1\|1852181_1852859_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_003722721.1\|1853033_1853852_-	pur operon repressor	A0A1V0SKE5	Klosneuvirus	3.1e-05	25.4

DBSCAN-SWA_126

1857728 : 1858955

Bacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733142.1\|1857728_1858955_-	DUF348 domain-containing protein	A0A0S2SXZ8	Bacillus_phage	2.0e-24	58.4

DBSCAN-SWA_127

1871884 : 1873882

Hokovirus(100.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722707.1\|1871884_1873882_-\|tRNA	methionine--tRNA ligase	A0A1V0SEZ7	Hokovirus	1.1e-101	33.6

DBSCAN-SWA_128

1880376 : 1883886

Paramecium_bursaria_Chlorella_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_072215767.1\|1880376_1881642_-	DUF1254 domain-containing protein	M1H738	Paramecium_bursaria_Chlorella_virus	1.0e-23	25.5
WP_003723496.1\|1881703_1882561_-	glucose transporter GlcU	NA	NA	NA	NA
WP_003723495.1\|1882675_1882960_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A2I7SC16	Paenibacillus_phage	5.8e-12	51.4
WP_012952065.1\|1883004_1883886_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	M1PLC5	Streptococcus_phage	2.9e-62	45.9

DBSCAN-SWA_129

1888268 : 1889984

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733311.1\|1888268_1889984_-	collagen binding domain-containing protein	F8HGQ4	Streptococcus_phage	1.3e-13	33.9

DBSCAN-SWA_130

1897726 : 1898431

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723481.1\|1897726_1898431_-	metal ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.5e-19	29.1

DBSCAN-SWA_131

1913312 : 1914821

Klosneuvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003728204.1\|1913312_1914821_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	1.3e-57	34.0

DBSCAN-SWA_132

1918220 : 1928947

Listeria_phage(33.33%)

holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732227.1\|1918220_1918949_-	N-acetylmuramoyl-L-alanine amidase	A0A0N9SGH1	Paenibacillus_phage	4.3e-35	42.5
WP_003721755.1\|1918929_1919352_-\|holin	holin family protein	Q2I8E7	Bacillus_phage	1.1e-27	46.3
WP_003732226.1\|1919370_1919907_-	hypothetical protein	NA	NA	NA	NA
WP_009931691.1\|1919903_1920383_-	hypothetical protein	NA	NA	NA	NA
WP_012952080.1\|1920397_1920973_-	hypothetical protein	NA	NA	NA	NA
WP_003721751.1\|1920987_1921287_-	hypothetical protein	NA	NA	NA	NA
WP_010958675.1\|1921276_1922413_-	minor structural protein	A8ATA9	Listeria_phage	5.0e-54	28.9
WP_003734720.1\|1922422_1923241_-\|tail	phage tail family protein	A0A060AFE1	Staphylococcus_phage	7.2e-39	35.0
WP_012952081.1\|1923237_1925106_-	membrane protein	A0A097PAU2	Streptococcus_pyogenes_phage	3.5e-20	45.8
WP_012952082.1\|1925092_1925497_-	hypothetical protein	NA	NA	NA	NA
WP_003721745.1\|1925538_1925841_-	hypothetical protein	NA	NA	NA	NA
WP_003721744.1\|1925888_1926401_-\|tail	phage major tail protein, TP901-1 family	A0A097PBF4	Streptococcus_pyogenes_phage	1.2e-47	62.7
WP_012952083.1\|1926413_1926803_-	DUF5072 domain-containing protein	NA	NA	NA	NA
WP_003732220.1\|1927080_1927497_-	hypothetical protein	A8ASQ1	Listeria_phage	1.3e-20	39.3
WP_003732219.1\|1927508_1927937_-	hypothetical protein	NA	NA	NA	NA
WP_003721740.1\|1928153_1928489_+	helix-turn-helix transcriptional regulator	A0A2H4JAR9	uncultured_Caudovirales_phage	4.0e-20	52.5
WP_003721739.1\|1928494_1928947_+	ImmA/IrrE family metallo-endopeptidase	A0A059T7S0	Listeria_phage	4.0e-31	47.9

DBSCAN-SWA_133

1932771 : 1939588

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721734.1\|1932771_1934514_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	5.3e-55	30.1
WP_003732216.1\|1934506_1936288_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.7e-53	30.8
WP_003721732.1\|1936312_1937215_-	ROK family protein	NA	NA	NA	NA
WP_072215839.1\|1937317_1939588_-	chitinase	A0A2K9L3D4	Tupanvirus	5.8e-38	32.1

DBSCAN-SWA_134

1964228 : 1965185

Paramecium_bursaria_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012952094.1\|1964228_1965185_-	NAD(P)-binding domain-containing protein	M1H502	Paramecium_bursaria_Chlorella_virus	1.4e-30	29.3

DBSCAN-SWA_135

1977898 : 1982404

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012952109.1\|1977898_1982404_-	type VII secretion protein EssC	V5UPA0	Mycobacterium_phage	2.0e-37	22.7

DBSCAN-SWA_136

1988374 : 1994620

Megavirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721679.1\|1988374_1989667_-	adenylosuccinate synthase	G5CQQ4	Megavirus	4.9e-66	35.9
WP_003721677.1\|1989925_1991278_-	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.0e-122	54.2
WP_003724881.1\|1991302_1991749_-	50S ribosomal protein L9	NA	NA	NA	NA
WP_003721675.1\|1991751_1993725_-	cyclic-di-AMP phosphodiesterase PdeA	NA	NA	NA	NA
WP_003721674.1\|1993891_1994620_-	response regulator transcription factor	A0A2H4J4Z6	uncultured_Caudovirales_phage	6.0e-29	29.2

DBSCAN-SWA_137

1998093 : 1998630

Listeria_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003721668.1\|1998093_1998630_-	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	1.2e-53	66.3

DBSCAN-SWA_138

2002129 : 2007859

Acanthocystis_turfacea_Chlorella_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009911777.1\|2002129_2003239_-	agmatine deiminase	M1HI51	Acanthocystis_turfacea_Chlorella_virus	4.0e-109	51.8
WP_003721662.1\|2003340_2004282_-	carbamate kinase	NA	NA	NA	NA
WP_012952112.1\|2004294_2005389_-	agmatine deiminase	M1HES8	Acanthocystis_turfacea_Chlorella_virus	7.7e-113	53.5
WP_003732183.1\|2005375_2006761_-	APC family permease	NA	NA	NA	NA
WP_003721659.1\|2006833_2007859_-	putrescine carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	1.1e-15	26.1

DBSCAN-SWA_139

2014117 : 2019949

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012952115.1\|2014117_2015173_+	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	3.3e-20	26.4
WP_012952116.1\|2015189_2015999_+	Cof-type HAD-IIB family hydrolase	NA	NA	NA	NA
WP_003721652.1\|2016034_2016373_-	DUF4064 domain-containing protein	A0A0S2MVJ2	Bacillus_phage	2.1e-05	32.7
WP_025370520.1\|2016595_2017045_+	DUF2712 domain-containing protein	NA	NA	NA	NA
WP_003721649.1\|2017115_2017880_+	hypothetical protein	NA	NA	NA	NA
WP_003732181.1\|2017866_2018580_+	WxPxxD family membrane protein	NA	NA	NA	NA
WP_003721647.1\|2018581_2019304_+	DUF2705 family protein	NA	NA	NA	NA
WP_003732180.1\|2019319_2019949_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	1.5e-28	37.2

DBSCAN-SWA_140

2042078 : 2050805

Bacillus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723770.1\|2042078_2044607_-	DNA gyrase subunit A	G3M9Z5	Bacillus_virus	5.8e-111	37.6
WP_003723769.1\|2044701_2046642_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	G3M9Z3	Bacillus_virus	6.1e-145	45.4
WP_003723768.1\|2046690_2047803_-	DNA replication/repair protein RecF	NA	NA	NA	NA
WP_010958651.1\|2047806_2048028_-	S4 domain-containing protein YaaA	A0A1X9I5V8	Streptococcus_phage	2.6e-07	45.6
WP_012952124.1\|2048207_2049551_-	MATE family efflux transporter	NA	NA	NA	NA
WP_003725616.1\|2049659_2050805_-	DNA polymerase III subunit beta	B4UTW9	Rhizobium_phage	1.7e-25	25.7

DBSCAN-SWA_141

2062484 : 2063897

Mycobacterium_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038406087.1\|2062484_2063897_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	1.8e-29	27.2

DBSCAN-SWA_142

2078029 : 2085784

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723837.1\|2078029_2079151_+	glycerate kinase	W6LM47	Streptococcus_phage	1.1e-66	48.9
WP_003723836.1\|2079147_2079810_+	beta-phosphoglucomutase	M1I080	Acanthocystis_turfacea_Chlorella_virus	5.3e-08	27.0
WP_003723835.1\|2079932_2080253_+	thioredoxin family protein	A0A0K2FIM3	Achromobacter_phage	2.7e-10	31.1
WP_003732155.1\|2080308_2080908_-	nitroreductase family protein	NA	NA	NA	NA
WP_003733897.1\|2081101_2081455_+	hypothetical protein	A0A1S7FZ87	Listeria_phage	2.5e-12	41.3
WP_003722186.1\|2081557_2081980_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003722185.1\|2081993_2083142_+	MFS transporter	NA	NA	NA	NA
WP_012951057.1\|2083512_2084604_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	2.0e-121	61.1
WP_009918143.1\|2084596_2085784_+	phosphoglycerate dehydrogenase	M1NSB9	Streptococcus_phage	6.2e-116	54.2

DBSCAN-SWA_143

2116701 : 2120613

Bifidobacterium_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010990072.1\|2116701_2117556_+	nucleoid occlusion protein	I3NLC2	Bifidobacterium_phage	4.9e-14	31.6
WP_003722152.1\|2117567_2117867_+	hypothetical protein	NA	NA	NA	NA
WP_003732136.1\|2118025_2118784_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003722150.1\|2119007_2119769_+	ParA family protein	Q8JL10	Natrialba_phage	4.4e-22	29.0
WP_003722149.1\|2119761_2120613_+	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.5e-18	32.7

DBSCAN-SWA_144

2124988 : 2126455

Tupanvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038406091.1\|2124988_2126455_+	catalase	A0A2K9L572	Tupanvirus	2.4e-109	47.8

DBSCAN-SWA_145

2144152 : 2145040

Amsacta_moorei_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722129.1\|2144152_2145040_+	ABC transporter ATP-binding protein	Q9EMR9	Amsacta_moorei_entomopoxvirus	3.3e-13	27.4

DBSCAN-SWA_146

2150734 : 2160766

Tupanvirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009924391.1\|2150734_2152189_-	glycoside hydrolase family 1 protein	A0A0B5JD41	Pandoravirus	1.9e-50	30.3
WP_072215787.1\|2152216_2152525_-	hypothetical protein	NA	NA	NA	NA
WP_012951082.1\|2152703_2154314_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.2e-45	29.5
WP_012951083.1\|2154371_2154902_+	ADP-ribose-binding protein	A0A0K1L687	Scale_drop_disease_virus	3.4e-29	49.3
WP_003722118.1\|2155189_2156656_+	IMP dehydrogenase	A0A1V0SHK8	Klosneuvirus	8.0e-97	40.0
WP_003732117.1\|2156816_2158589_+	DNA helicase RecQ	A0A2K9L3P7	Tupanvirus	6.3e-80	37.1
WP_012951084.1\|2158612_2160766_+	DNA topoisomerase III	A0A1X9I6W8	Streptococcus_phage	6.7e-44	34.1

DBSCAN-SWA_147

2164591 : 2182812

Bacillus_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732112.1\|2164591_2166364_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	4.0e-50	30.0
WP_003732111.1\|2166363_2168085_-	ABC transporter ATP-binding protein	A0A076FI99	Aureococcus_anophage	2.3e-10	23.4
WP_012951087.1\|2168245_2169952_-	aminodeoxychorismate synthase component I	A0A0B5J984	Pandoravirus	1.2e-46	31.1
WP_003722109.1\|2169948_2170521_-	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.2e-42	46.8
WP_003722108.1\|2170650_2171070_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA
WP_003722107.1\|2171404_2172688_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	5.0e-95	44.7
WP_003722106.1\|2172707_2172959_+	TfoX/Sxy family protein	NA	NA	NA	NA
WP_010990058.1\|2173012_2174740_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.5e-150	53.3
WP_003722104.1\|2175069_2175759_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_003722103.1\|2175901_2176546_+	fructose-6-phosphate aldolase	H8ZMU3	Synechococcus_phage	1.0e-48	47.7
WP_003722102.1\|2176564_2176912_+	hypothetical protein	NA	NA	NA	NA
WP_010990057.1\|2177028_2178237_+	multidrug efflux MFS transporter Lde	NA	NA	NA	NA
WP_003722100.1\|2178226_2178517_+	hypothetical protein	NA	NA	NA	NA
WP_012951090.1\|2178509_2179199_+	NAD-dependent protein deacylase	A0A068EPD4	Bacillus_phage	8.0e-23	31.1
WP_003732103.1\|2179316_2180651_+	HlyC/CorC family transporter	NA	NA	NA	NA
WP_012951091.1\|2180718_2181675_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_012951092.1\|2181678_2182812_-	glycerate kinase	W6LM47	Streptococcus_phage	3.3e-42	37.6

DBSCAN-SWA_148

2197603 : 2199181

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951097.1\|2197603_2199181_-	acyl--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	4.1e-83	36.9

DBSCAN-SWA_149

2202633 : 2206097

Bodo_saltans_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_014931743.1\|2202633_2204358_+	thiol reductant ABC exporter subunit CydD	A0A2H4UU96	Bodo_saltans_virus	3.5e-19	33.0
WP_003732089.1\|2204357_2206097_+	thiol reductant ABC exporter subunit CydC	W8CYL7	Bacillus_phage	4.1e-23	25.9

DBSCAN-SWA_150

2214982 : 2218922

Streptococcus_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732084.1\|2214982_2216722_+	DNA polymerase III subunit gamma/tau	A0A1U9WR94	Streptococcus_virus	1.9e-57	39.2
WP_003722063.1\|2216751_2217069_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA
WP_003722062.1\|2217177_2217774_+	recombination protein RecR	NA	NA	NA	NA
WP_003722061.1\|2217788_2218034_+	YaaL family protein	NA	NA	NA	NA
WP_009931159.1\|2218079_2218922_-	aldo/keto reductase	A0A1V0SKP9	Klosneuvirus	6.1e-25	26.9

DBSCAN-SWA_151

2224558 : 2231484

Streptococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009930435.1\|2224558_2225185_+	dTMP kinase	M1PSC7	Streptococcus_phage	5.5e-47	47.5
WP_003722052.1\|2225292_2225622_+	hypothetical protein	NA	NA	NA	NA
WP_012951104.1\|2225858_2227631_-	1,4-beta-N-acetylmuramoylhydrolase	Q9ZXE4	Bacillus_phage	2.0e-17	42.1
WP_009925488.1\|2227792_2228359_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_003734068.1\|2228487_2228742_+	hypothetical protein	NA	NA	NA	NA
WP_012951105.1\|2228913_2231484_+	magnesium-translocating P-type ATPase	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	2.0e-42	25.9

DBSCAN-SWA_152

2238998 : 2247140

Paramecium_bursaria_Chlorella_virus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733062.1\|2238998_2241044_+	potassium-transporting ATPase subunit KdpB	M1HBF8	Paramecium_bursaria_Chlorella_virus	3.2e-27	25.0
WP_012951108.1\|2241058_2241631_+	K(+)-transporting ATPase subunit C	NA	NA	NA	NA
WP_010990039.1\|2241646_2244337_+	sensor histidine kinase KdpD	Q8QKV7	Ectocarpus_siliculosus_virus	1.8e-09	26.5
WP_003722035.1\|2244333_2245029_+	response regulator transcription factor	Q56AR1	Bacillus_thuringiensis_phage	1.2e-05	29.9
WP_003722034.1\|2245069_2245882_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_009924327.1\|2245883_2247140_-	Y-family DNA polymerase	O64031	Bacillus_phage	3.4e-80	41.9

DBSCAN-SWA_153

2255885 : 2257971

Synechococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951112.1\|2255885_2256938_+	galactitol-1-phosphate 5-dehydrogenase	E3SJ82	Synechococcus_phage	7.4e-12	24.1
WP_003733054.1\|2256939_2257971_+	zinc-binding dehydrogenase	A0A2K9L7I1	Tupanvirus	1.3e-16	30.7

DBSCAN-SWA_154

2265176 : 2268560

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003724965.1\|2265176_2267264_+	elongation factor G	E4ZFJ7	Streptococcus_phage	1.0e-65	27.8
WP_003723640.1\|2267372_2268560_+	elongation factor Tu	A0A1V0SLW6	Klosneuvirus	1.2e-13	26.7

DBSCAN-SWA_155

2279626 : 2280607

Indivirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733043.1\|2279626_2280607_-	polyprenyl synthetase family protein	A0A1V0SE37	Indivirus	9.3e-09	24.0

DBSCAN-SWA_156

2305243 : 2307718

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723672.1\|2305243_2305906_-	MgtC/SapB family protein	G3MA03	Bacillus_virus	1.8e-19	45.6
WP_012951123.1\|2306036_2306876_+	energy-coupling factor ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.2e-17	32.1
WP_003728531.1\|2306851_2307718_+	energy-coupling factor ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.3e-14	31.5

DBSCAN-SWA_157

2312547 : 2314967

Staphylococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951125.1\|2312547_2313399_+	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	2.3e-48	38.0
WP_012951126.1\|2313440_2314967_-	GW domain-containing glycosaminoglycan-binding protein	A0A0K2CP65	Brevibacillus_phage	1.5e-26	49.0

DBSCAN-SWA_158

2331786 : 2335675

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012952041.1\|2331786_2332464_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-58	48.0
WP_012952040.1\|2332460_2333840_+	HAMP domain-containing sensor histidine kinase	W8CYF6	Bacillus_phage	7.1e-55	43.7
WP_010990019.1\|2333918_2335007_+	ABC transporter permease	NA	NA	NA	NA
WP_003723280.1\|2335006_2335675_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	5.0e-38	42.0

DBSCAN-SWA_159

2350788 : 2352111

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009924630.1\|2350788_2352111_+	HD domain-containing protein	A0A1B1ISR1	uncultured_Mediterranean_phage	2.6e-30	33.2

DBSCAN-SWA_160

2356522 : 2362155

Only_Syngen_Nebraska_virus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723607.1\|2356522_2358121_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	6.5e-153	52.2
WP_012952034.1\|2358164_2360918_-	GW domain-containing glycosaminoglycan-binding protein	A0A288WFW6	Bacillus_phage	2.2e-23	29.4
WP_003732527.1\|2361234_2362155_+	diacylglycerol kinase family lipid kinase	A0A1V0SBJ0	Catovirus	2.6e-21	28.4

DBSCAN-SWA_161

2369723 : 2370671

Shigella_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012952032.1\|2369723_2370671_+	glycosyltransferase family 2 protein	U5P087	Shigella_phage	5.2e-65	43.6

DBSCAN-SWA_162

2374995 : 2380627

Pectobacterium_bacteriophage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003729255.1\|2374995_2375571_+	thymidine kinase	A0A0A0Q2F0	Pectobacterium_bacteriophage	8.6e-47	51.4
WP_003726351.1\|2375593_2376670_+	peptide chain release factor 1	NA	NA	NA	NA
WP_003723474.1\|2376656_2377508_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA
WP_009925391.1\|2377808_2378846_+	threonylcarbamoyl-AMP synthase	S4VW33	Pandoravirus	7.4e-65	42.3
WP_009911254.1\|2378842_2379250_+	low molecular weight protein arginine phosphatase	NA	NA	NA	NA
WP_003732521.1\|2379385_2380627_+	serine hydroxymethyltransferase	A0A240F2Y9	Aeromonas_phage	5.9e-101	53.1

DBSCAN-SWA_163

2394088 : 2395678

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003732514.1\|2394088_2394454_+	single-stranded DNA-binding protein	Q0ILF5	Lactococcus_phage	2.2e-27	48.7
WP_012952029.1\|2394844_2395678_+	LysM peptidoglycan-binding domain-containing protein	A0A217ER34	Bacillus_phage	1.3e-22	60.4

DBSCAN-SWA_164

2400542 : 2404635

Streptococcus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010990008.1\|2400542_2401178_-	YigZ family protein	A0A1X9I5T8	Streptococcus_phage	2.1e-41	45.0
WP_003722647.1\|2401562_2402249_+	response regulator transcription factor	NA	NA	NA	NA
WP_003722646.1\|2402269_2403121_+	DegV family protein	A0A0N9SI50	Staphylococcus_phage	9.9e-15	37.1
WP_009924458.1\|2403315_2404635_+	DEAD/DEAH box helicase	A0A1X9I5S6	Streptococcus_phage	2.1e-72	37.4

DBSCAN-SWA_165

2408870 : 2421025

Planktothrix_phage(28.57%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_096807916.1\|2408870_2409971_+	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	3.2e-05	38.7
WP_003722640.1\|2409977_2410841_+	YitT family protein	M1Q1P6	Streptococcus_phage	1.2e-39	34.5
WP_003720823.1\|2411344_2412031_+	cell division ATP-binding protein FtsE	G9BWD6	Planktothrix_phage	5.0e-25	30.7
WP_003732506.1\|2412020_2412905_+	ABC transporter permease	NA	NA	NA	NA
WP_003722638.1\|2412980_2414186_+	peptidase P60	A0A0K0NL58	Gordonia_phage	1.2e-05	40.7
WP_012952025.1\|2414305_2415616_+	peptidoglycan DD-metalloendopeptidase family protein	G9BW84	Planktothrix_phage	6.6e-10	35.5
WP_003722636.1\|2415738_2417187_+	cardiolipin synthase	NA	NA	NA	NA
WP_003732505.1\|2417214_2418390_+\|protease	serine protease	NA	NA	NA	NA
WP_009924808.1\|2418539_2419250_+	response regulator transcription factor	W8CYM9	Bacillus_phage	7.4e-40	39.7
WP_012952023.1\|2419249_2421025_+	PAS domain-containing protein	W8CYF6	Bacillus_phage	1.0e-37	37.1

DBSCAN-SWA_166

2424114 : 2426969

Bacillus_virus(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003725427.1\|2424114_2424930_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.9e-15	30.1
WP_003722628.1\|2424944_2425724_+	phosphate ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.4e-15	28.2
WP_003722627.1\|2425736_2426396_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_003722626.1\|2426663_2426969_+	winged helix-turn-helix transcriptional regulator	A0A218MNF3	uncultured_virus	9.6e-05	40.6

DBSCAN-SWA_167

2430624 : 2433495

uncultured_Mediterranean_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025370655.1\|2430624_2433495_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	0.0e+00	58.6

DBSCAN-SWA_168

2441712 : 2449556

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722610.1\|2441712_2442672_+	thioredoxin-disulfide reductase	G3MA85	Bacillus_virus	2.0e-88	53.7
WP_012952019.1\|2442790_2443774_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	5.8e-51	37.2
WP_012952018.1\|2443790_2444852_+	galactose mutarotase	NA	NA	NA	NA
WP_012952017.1\|2444893_2446624_+	phospho-sugar mutase	A0A1X9I671	Streptococcus_phage	3.0e-175	54.0
WP_003722606.1\|2446731_2447607_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	1.9e-08	29.7
WP_003722605.1\|2447608_2448577_+	YvcK family protein	A1IMD5	Streptococcus_phage	6.7e-68	43.3
WP_003722604.1\|2448584_2449556_+	DNA-binding protein WhiA	Q7AWZ3	Streptococcus_phage	5.2e-52	39.4

DBSCAN-SWA_169

2453472 : 2456242

Agrobacterium_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722600.1\|2453472_2454069_-	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	A0A223W000	Agrobacterium_phage	6.6e-58	57.4
WP_012952014.1\|2454225_2455659_+	hypothetical protein	A0A2D1GD28	Mycobacterium_phage	8.3e-06	29.1
WP_012952013.1\|2455906_2456242_-	membrane protein	S5MNN8	Brevibacillus_phage	6.0e-16	76.6

DBSCAN-SWA_170

2468568 : 2469861

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003727923.1\|2468568_2469861_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	2.3e-172	71.7

DBSCAN-SWA_171

2473286 : 2476148

Lactococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012952006.1\|2473286_2475668_+	ribonuclease R	Q0GXV6	Lactococcus_phage	2.3e-93	40.9
WP_003723350.1\|2475683_2476148_+	SsrA-binding protein SmpB	W5RAM5	Staphylococcus_phage	1.6e-51	68.1

DBSCAN-SWA_172

2487880 : 2489588

Streptococcus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012952000.1\|2487880_2488777_+	YafY family transcriptional regulator	A0A1B0RXM1	Streptococcus_phage	1.6e-07	28.2
WP_003732474.1\|2488831_2489215_+	hypothetical protein	NA	NA	NA	NA
WP_009925285.1\|2489246_2489588_-	YxeA family protein	A0A0K2CYS5	Paenibacillus_phage	8.0e-08	40.7

DBSCAN-SWA_173

2496909 : 2506136

Bacillus_phage(40.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010989991.1\|2496909_2497701_+	ABC transporter ATP-binding protein	A0A1V0SJ29	Klosneuvirus	9.2e-15	30.0
WP_003723330.1\|2497843_2499013_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_038406111.1\|2499088_2500264_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_003723328.1\|2500419_2500773_+	arsenate reductase family protein	M1PLC0	Streptococcus_phage	6.5e-29	57.8
WP_003723327.1\|2500813_2501191_+	glycine cleavage system protein GcvH	NA	NA	NA	NA
WP_003723326.1\|2501275_2501560_+	thioredoxin family protein	NA	NA	NA	NA
WP_003732468.1\|2501752_2502628_+	cation transporter	NA	NA	NA	NA
WP_003722450.1\|2502702_2503398_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.8e-41	42.7
WP_012951998.1\|2503387_2504530_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	5.0e-22	25.7
WP_003722448.1\|2504608_2504797_+	hypothetical protein	NA	NA	NA	NA
WP_003722447.1\|2505113_2506136_+	methionine ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	5.0e-29	34.2

DBSCAN-SWA_174

2509158 : 2515565

Cedratvirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722442.1\|2509158_2509944_+	Fe-S cluster assembly ATPase SufC	A0A285PWH2	Cedratvirus	2.1e-11	28.1
WP_012951997.1\|2509962_2511264_+	Fe-S cluster assembly protein SufD	NA	NA	NA	NA
WP_012951996.1\|2511264_2512491_+	cysteine desulfurase	Q2XUY6	environmental_halophage	4.3e-104	44.9
WP_003722439.1\|2512487_2512931_+	SUF system NifU family Fe-S cluster assembly protein	A0A2P1CJL8	Mycobacterium_phage	1.6e-13	35.8
WP_003722438.1\|2512953_2514348_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_025370652.1\|2514413_2514587_-	hypothetical protein	NA	NA	NA	NA
WP_003732461.1\|2514722_2515565_+	DUF72 domain-containing protein	A0A1D6Y809	Golden_Marseillevirus	2.7e-17	28.6

DBSCAN-SWA_175

2521249 : 2521750

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722422.1\|2521249_2521750_-	phosphatidylglycerophosphatase A	G3MBC5	Bacillus_virus	3.4e-39	54.2

DBSCAN-SWA_176

2527505 : 2528501

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951989.1\|2527505_2528501_-	NAD(P)/FAD-dependent oxidoreductase	Q9JRK7	Streptococcus_phage	2.1e-40	61.3

DBSCAN-SWA_177

2541224 : 2544976

Aureococcus_anophage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722402.1\|2541224_2541809_+	peptidyl-prolyl cis-trans isomerase	A0A076FI46	Aureococcus_anophage	2.4e-28	40.3
WP_003733277.1\|2541895_2542291_+	hypothetical protein	NA	NA	NA	NA
WP_012951985.1\|2542332_2543694_-	aspartate kinase	NA	NA	NA	NA
WP_003741107.1\|2543938_2544253_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_003722398.1\|2544295_2544976_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.1e-35	38.2

DBSCAN-SWA_178

2569409 : 2570651

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951979.1\|2569409_2570651_+	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	6.2e-58	36.8

DBSCAN-SWA_179

2578876 : 2579656

Acanthocystis_turfacea_Chlorella_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951976.1\|2578876_2579656_+	amino acid ABC transporter ATP-binding protein	M1HV27	Acanthocystis_turfacea_Chlorella_virus	4.1e-07	23.1

DBSCAN-SWA_180

2585673 : 2586999

Phaeocystis_globosa_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003731859.1\|2585673_2586999_-	aminopeptidase C	R4TV59	Phaeocystis_globosa_virus	8.6e-82	38.0

DBSCAN-SWA_181

2590891 : 2630991

Listeria_phage(96.23%)

terminase,holin,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003739618.1\|2590891_2591239_+	helix-turn-helix transcriptional regulator	A0A0A7RTK4	Clostridium_phage	9.9e-06	40.7
WP_031645473.1\|2591293_2591770_-	competence protein ComK	NA	NA	NA	NA
WP_012951970.1\|2591760_2593119_-	recombinase family protein	Q8LTD8	Listeria_phage	1.1e-257	99.8
WP_012951969.1\|2593179_2594694_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA
WP_012951968.1\|2594898_2595333_-	hypothetical protein	NA	NA	NA	NA
WP_038406113.1\|2595391_2596099_-	hypothetical protein	A0A0B5CTT6	Listeria_phage	1.5e-122	98.7
WP_012951966.1\|2596125_2596617_-	hypothetical protein	A8ATX4	Listeria_phage	2.9e-91	99.4
WP_012951965.1\|2596647_2596953_-	helix-turn-helix transcriptional regulator	A8ASM2	Listeria_phage	1.8e-27	68.5
WP_012951964.1\|2597115_2597367_+	helix-turn-helix transcriptional regulator	A8ASM3	Listeria_phage	9.3e-22	76.7
WP_003733687.1\|2597370_2597565_+	hypothetical protein	A0A059T6E5	Listeria_phage	1.4e-25	95.3
WP_012951963.1\|2597523_2597883_-	DUF2513 domain-containing protein	A0A2H4J4K9	uncultured_Caudovirales_phage	2.1e-06	26.3
WP_012951962.1\|2597947_2598184_+	hypothetical protein	A0A059T5E9	Listeria_phage	2.8e-36	97.4
WP_012951961.1\|2598180_2598462_+	hypothetical protein	A8ATX8	Listeria_phage	3.6e-38	96.7
WP_003733685.1\|2598467_2598743_+	hypothetical protein	NA	NA	NA	NA
WP_012951960.1\|2598724_2599501_+	phage antirepressor Ant	A0A0B5D0I2	Listeria_phage	9.6e-142	99.2
WP_012951959.1\|2599624_2600158_+	hypothetical protein	A0A059T5F0	Listeria_phage	1.5e-77	87.9
WP_012951958.1\|2600154_2600370_+	hypothetical protein	Q9T176	Listeria_phage	9.7e-28	93.0
WP_003722564.1\|2600478_2600667_+	hypothetical protein	Q9T175	Listeria_phage	1.8e-22	82.3
WP_003734953.1\|2600972_2601167_+	hypothetical protein	A0A059T6E8	Listeria_phage	1.6e-29	100.0
WP_012951957.1\|2601163_2601640_+	siphovirus Gp157 family protein	A0A059T5F1	Listeria_phage	9.5e-76	100.0
WP_012951956.1\|2601645_2602305_+	ERF family protein	A8ASN3	Listeria_phage	5.3e-93	94.1
WP_012951955.1\|2602321_2603305_+	DnaD domain protein	A8ASN4	Listeria_phage	1.4e-166	91.7
WP_012951954.1\|2603301_2603589_+	hypothetical protein	A0A059T7V3	Listeria_phage	1.7e-40	88.4
WP_012951953.1\|2603585_2604116_+	hypothetical protein	A0A059T5F9	Listeria_phage	8.4e-97	95.5
WP_031645470.1\|2604251_2604482_+	DUF3850 domain-containing protein	A0A059T699	Listeria_phage	1.1e-18	73.8
WP_012951951.1\|2604503_2604863_+	hypothetical protein	A0A059T801	Listeria_phage	6.6e-45	92.0
WP_012951950.1\|2604859_2605261_+	hypothetical protein	A8ATZ6	Listeria_phage	1.4e-48	75.9
WP_012951949.1\|2605257_2605737_+	single-stranded DNA-binding protein	A8ATZ7	Listeria_phage	1.4e-74	91.2
WP_012951948.1\|2605758_2606136_+	hypothetical protein	NA	NA	NA	NA
WP_031645468.1\|2606163_2606346_+	hypothetical protein	A8ASP6	Listeria_phage	2.9e-17	81.0
WP_012951947.1\|2606290_2606695_+	DUF1064 domain-containing protein	A8ASP7	Listeria_phage	1.9e-61	89.6
WP_012951946.1\|2606698_2607082_+	DUF2481 family protein	A0A0B5CYS3	Listeria_phage	5.7e-63	96.1
WP_012951945.1\|2607222_2607657_+	hypothetical protein	A8AU03	Listeria_phage	1.6e-74	97.2
WP_012951944.1\|2607942_2608170_+	hypothetical protein	A8AU06	Listeria_phage	1.5e-34	100.0
WP_012951943.1\|2608209_2608950_+	hypothetical protein	A0A0B5CTX0	Listeria_phage	2.4e-134	99.6
WP_012951942.1\|2608942_2610262_+\|terminase	PBSX family phage terminase large subunit	A8ATU6	Listeria_phage	2.9e-263	99.3
WP_012951941.1\|2610276_2611833_+	hypothetical protein	A8ATU7	Listeria_phage	9.4e-298	97.9
WP_012951940.1\|2611837_2612881_+	hypothetical protein	A0A0B5D111	Listeria_phage	1.9e-193	96.5
WP_003744996.1\|2612976_2613531_+	hypothetical protein	A8ATU9	Listeria_phage	1.1e-88	99.5
WP_012951939.1\|2613553_2614426_+	hypothetical protein	A8ATV0	Listeria_phage	3.0e-160	99.0
WP_012951937.1\|2614607_2614961_+	hypothetical protein	A8ATV2	Listeria_phage	7.6e-62	100.0
WP_003733695.1\|2614960_2615326_+	hypothetical protein	A8ATV3	Listeria_phage	9.9e-65	99.2
WP_012951936.1\|2615315_2615633_+	HK97 gp10 family phage protein	A8ATV4	Listeria_phage	2.4e-51	98.1
WP_010991155.1\|2615629_2616001_+	hypothetical protein	A0A0B5CTY4	Listeria_phage	5.5e-63	99.2
WP_012951935.1\|2616005_2616692_+	Ig domain-containing protein	A0A0B5CYK8	Listeria_phage	2.6e-114	97.4
WP_012951934.1\|2616747_2617179_+	hypothetical protein	A8ATV7	Listeria_phage	3.2e-70	95.8
WP_074046934.1\|2617175_2617487_+	hypothetical protein	A0A0B5D116	Listeria_phage	1.3e-41	96.7
WP_012951932.1\|2617491_2622291_+\|tail	phage tail tape measure protein	A8ATV9	Listeria_phage	0.0e+00	89.1
WP_012951931.1\|2622287_2623856_+	hypothetical protein	A8ATW0	Listeria_phage	2.0e-303	99.2
WP_012951930.1\|2623868_2626031_+	hypothetical protein	A8ATW1	Listeria_phage	0.0e+00	98.8
WP_003722523.1\|2626069_2626435_+	hypothetical protein	Q9T1A0	Listeria_phage	7.4e-12	100.0
WP_003722522.1\|2626447_2626729_+\|holin	holin	A8ASL4	Listeria_phage	3.4e-41	94.6
WP_012951929.1\|2626728_2627574_+	peptidase M15	A0A059T7Y8	Listeria_phage	1.4e-133	92.6
WP_003722520.1\|2627614_2628388_-	DUF3825 domain-containing protein	A8ATW5	Listeria_phage	9.5e-150	100.0
WP_012951928.1\|2628662_2629160_-	AP2 domain-containing protein	A8ATW6	Listeria_phage	4.9e-83	90.9
WP_012951927.1\|2629171_2629600_-	transcriptional regulator	A8ATJ2	Listeria_phage	3.9e-28	87.3
WP_012951926.1\|2629601_2630006_-	hypothetical protein	NA	NA	NA	NA
WP_012951925.1\|2630107_2630317_-	hypothetical protein	A0A059T7Z0	Listeria_phage	5.5e-28	97.1
WP_012951924.1\|2630757_2630991_+	hypothetical protein	A0A059T6E1	Listeria_phage	8.0e-36	94.8

DBSCAN-SWA_182

2635575 : 2639283

Bacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038406114.1\|2635575_2639283_+	helicase-exonuclease AddAB subunit AddA	G3MA40	Bacillus_virus	1.8e-20	27.6

DBSCAN-SWA_183

2646748 : 2650835

Moraxella_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003733871.1\|2646748_2648041_-	NCS2 family permease	A0A0R6PHV4	Moraxella_phage	4.2e-49	33.1
WP_003731867.1\|2648213_2648843_+	HAD family hydrolase	G3MA51	Bacillus_virus	4.0e-05	34.4
WP_038406115.1\|2648885_2650034_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003724134.1\|2650109_2650835_-	amino acid ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	4.4e-32	40.0

DBSCAN-SWA_184

2654499 : 2658524

Indivirus(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951917.1\|2654499_2655384_+	aldo/keto reductase	A0A1V0SDE7	Indivirus	9.5e-29	29.7
WP_003723378.1\|2655380_2656037_+	DNA alkylation repair protein	NA	NA	NA	NA
WP_003723377.1\|2656038_2656431_+	hypothetical protein	V5UQY3	Oenococcus_phage	1.1e-32	51.2
WP_003731874.1\|2656443_2657313_-	RluA family pseudouridine synthase	NA	NA	NA	NA
WP_010989933.1\|2657329_2657896_-	methylphosphotriester-DNA--protein-cysteine methyltransferase family protein	NA	NA	NA	NA
WP_012951915.1\|2658041_2658524_+	methylated-DNA--[protein]-cysteine S-methyltransferase	A0A0G2Y3R2	Acanthamoeba_polyphaga_mimivirus	3.7e-19	42.6

DBSCAN-SWA_185

2674253 : 2675159

Staphylococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003731881.1\|2674253_2675159_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-31	39.7

DBSCAN-SWA_186

2678705 : 2679059

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723354.1\|2678705_2679059_+	YlbF/YmcA family competence regulator	A0A1X9I5Y8	Streptococcus_phage	3.1e-07	32.4

DBSCAN-SWA_187

2686295 : 2687631

Mycobacterium_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723834.1\|2686295_2686718_-	HIT family protein	B5LJ12	Mycobacterium_phage	9.9e-08	33.6
WP_003723833.1\|2686878_2687631_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	2.9e-26	31.1

DBSCAN-SWA_188

2694742 : 2699851

Cronobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951904.1\|2694742_2697343_+	ATP-dependent chaperone ClpB	K4FB40	Cronobacter_phage	8.8e-123	37.7
WP_003723823.1\|2697433_2698123_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA
WP_003763532.1\|2698212_2698401_-	YjzD family protein	NA	NA	NA	NA
WP_012951903.1\|2698723_2699851_+	GW domain-containing glycosaminoglycan-binding protein	S5M633	Brevibacillus_phage	1.1e-24	45.5

DBSCAN-SWA_189

2709617 : 2716377

Planktothrix_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951901.1\|2709617_2710694_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.4e-19	30.3
WP_003722315.1\|2710690_2711659_+	ATP-binding cassette domain-containing protein	F2Y1V6	Organic_Lake_phycodnavirus	6.6e-07	28.0
WP_003720569.1\|2711977_2712373_+	transcriptional regulator Spx	NA	NA	NA	NA
WP_003722314.1\|2712604_2713258_+	adaptor protein MecA	NA	NA	NA	NA
WP_003734058.1\|2713383_2714499_+	CoiA	NA	NA	NA	NA
WP_003722312.1\|2714571_2716377_+	oligoendopeptidase F	A0A1X9I5X5	Streptococcus_phage	1.1e-66	28.5

DBSCAN-SWA_190

2721412 : 2723473

Klosneuvirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009914264.1\|2721412_2722192_+	ABC transporter ATP-binding protein	A0A1V0SJ29	Klosneuvirus	9.6e-17	29.2
WP_003731903.1\|2722195_2722936_+	class B sortase	NA	NA	NA	NA
WP_038406117.1\|2722996_2723473_+	siphovirus Gp157 family protein	A0A059T5F1	Listeria_phage	2.9e-32	48.1

DBSCAN-SWA_191

2733361 : 2735369

Acanthamoeba_polyphaga_mimivirus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722299.1\|2733361_2734123_+	SDR family oxidoreductase	A0A0G2Y8L6	Acanthamoeba_polyphaga_mimivirus	6.3e-05	31.9
WP_003722298.1\|2734295_2735369_+	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-20	36.8

DBSCAN-SWA_192

2741575 : 2742193

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003731912.1\|2741575_2742193_+	MBL fold metallo-hydrolase	A0A1X9I5D3	Streptococcus_phage	6.4e-48	47.1

DBSCAN-SWA_193

2749888 : 2758032

Listeria_phage(80.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038406118.1\|2749888_2751808_+	MBL fold metallo-hydrolase	A0A2P0VMX1	Tetraselmis_virus	6.9e-157	46.6
WP_003722280.1\|2751862_2752204_-	YxeA family protein	NA	NA	NA	NA
WP_003722279.1\|2752740_2755032_+	ribonucleoside-diphosphate reductase subunit alpha	A0A060AGL6	Listeria_phage	0.0e+00	72.8
WP_003729560.1\|2755087_2756137_+	ribonucleotide-diphosphate reductase subunit beta	A0A059T7I4	Listeria_phage	2.1e-168	85.1
WP_003722277.1\|2756133_2756571_+	flavodoxin	A0A060AFY8	Listeria_phage	2.5e-22	38.6
WP_003722276.1\|2756567_2756894_+	thioredoxin family protein	NA	NA	NA	NA
WP_003722274.1\|2757339_2757516_-	hypothetical protein	NA	NA	NA	NA
WP_003722273.1\|2757714_2758032_+	nucleoside triphosphate pyrophosphohydrolase family protein	A0A1S7FYY8	Listeria_phage	2.2e-28	58.4

DBSCAN-SWA_194

2767645 : 2768548

Anomala_cuprea_entomopoxvirus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003722263.1\|2767645_2768548_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	2.0e-21	29.9

DBSCAN-SWA_195

2794142 : 2798221

Lactobacillus_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009931149.1\|2794142_2794604_-	GNAT family N-acetyltransferase	E9LUK4	Lactobacillus_phage	1.1e-23	41.4
WP_012951887.1\|2794664_2795489_+	hypothetical protein	NA	NA	NA	NA
WP_003722375.1\|2795526_2797467_-	ABC transporter permease	NA	NA	NA	NA
WP_003722374.1\|2797453_2798221_-	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	3.7e-29	35.0

DBSCAN-SWA_196

2810662 : 2812108

Streptococcus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_009925710.1\|2810662_2812108_+	PLP-dependent aminotransferase family protein	A0A1X9I5H2	Streptococcus_phage	4.9e-22	24.1

DBSCAN-SWA_197

2818274 : 2823812

Vibrio_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951881.1\|2818274_2819798_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	3.9e-22	24.9
WP_003722348.1\|2819965_2821336_-	argininosuccinate lyase	NA	NA	NA	NA
WP_003722347.1\|2821339_2822554_-	argininosuccinate synthase	NA	NA	NA	NA
WP_012951880.1\|2822768_2823812_+	alpha/beta hydrolase	M1PGN2	Moumouvirus	2.0e-33	31.5

DBSCAN-SWA_198

2829780 : 2865439

Enterococcus_phage(20.69%)

capsid,terminase,head,integrase,tail,portal

attL 2829594:2829645|attR 2866640:2866691

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2829594:2829645	attL	NA	NA	NA	NA
WP_038406120.1\|2829780_2830929_-\|integrase	site-specific integrase	A0A1S7FYW5	Listeria_phage	3.1e-72	39.8
WP_051962043.1\|2830966_2831608_-	DUF4428 domain-containing protein	X5JB37	Clostridium_phage	5.7e-15	46.2
WP_038406122.1\|2831951_2832443_-	helix-turn-helix transcriptional regulator	A0A059T6G1	Listeria_phage	7.4e-23	49.5
WP_038406123.1\|2832710_2832896_+	helix-turn-helix domain-containing protein	Q5YAA3	Bacillus_phage	3.6e-07	46.7
WP_038406124.1\|2832909_2833161_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_144242132.1\|2833169_2833349_+	hypothetical protein	NA	NA	NA	NA
WP_038406126.1\|2833539_2833725_+	hypothetical protein	NA	NA	NA	NA
WP_038406127.1\|2833721_2834102_+	hypothetical protein	NA	NA	NA	NA
WP_038406128.1\|2834108_2834720_+	hypothetical protein	NA	NA	NA	NA
WP_038406129.1\|2834716_2835877_+	DUF2800 domain-containing protein	S5MUB5	Brevibacillus_phage	6.3e-105	54.5
WP_038406130.1\|2835893_2836463_+	DUF2815 family protein	D2J040	Enterococcus_phage	8.8e-52	60.0
WP_038406132.1\|2836695_2838723_+	hypothetical protein	D2J043	Enterococcus_phage	8.5e-198	53.2
WP_038406134.1\|2838735_2839275_+	hypothetical protein	NA	NA	NA	NA
WP_038406136.1\|2839464_2840271_+	hypothetical protein	A0A0A7NQP6	Lactobacillus_phage	1.5e-09	51.9
WP_038406138.1\|2840813_2843231_+	phage-like protein	D2J048	Enterococcus_phage	6.8e-287	57.9
WP_038406139.1\|2843498_2843777_+	VRR-NUC domain-containing protein	Q4ZD25	Staphylococcus_phage	6.2e-19	50.0
WP_038406140.1\|2843773_2845135_+	DEAD/DEAH box helicase	D2J050	Enterococcus_phage	2.8e-168	63.4
WP_038406141.1\|2845127_2845322_+	hypothetical protein	NA	NA	NA	NA
WP_038406142.1\|2845321_2845864_+	hypothetical protein	A0A1S7FZ07	Listeria_phage	2.6e-21	36.7
WP_051962044.1\|2845978_2846296_+	ImmA/IrrE family metallo-endopeptidase	A0A1X9I661	Streptococcus_phage	1.5e-16	55.1
WP_038406144.1\|2846265_2846772_+	hypothetical protein	A0A090DCM3	Clostridium_phage	5.6e-34	48.5
WP_038406145.1\|2846771_2848208_+\|terminase	phage terminase large subunit	A0A1S5SAP0	Streptococcus_phage	8.5e-160	58.9
WP_144242136.1\|2848365_2849916_+\|portal	phage portal protein	A0A097BY86	Enterococcus_phage	3.6e-132	57.7
WP_051962045.1\|2849902_2851525_+\|capsid	minor capsid protein	A0A1P8BKT0	Lactococcus_phage	3.7e-55	42.6
WP_077915871.1\|2851798_2852386_+	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_038406149.1\|2852401_2853295_+\|capsid	phage major capsid protein	A0A1B1V000	Enterococcus_phage	9.8e-98	61.0
WP_051962047.1\|2853309_2853606_+	hypothetical protein	A0A0S2SXV2	Bacillus_phage	4.5e-07	55.9
WP_038406151.1\|2853613_2853937_+\|head,tail	phage head-tail connector protein	A0A1P8BMC5	Lactococcus_phage	1.8e-17	51.7
WP_038406152.1\|2853933_2854233_+	hypothetical protein	NA	NA	NA	NA
WP_038406153.1\|2854232_2854565_+	hypothetical protein	A0A1L2K255	Streptococcus_phage	2.0e-16	50.0
WP_038406154.1\|2854561_2854948_+	DUF3168 domain-containing protein	A0A2P1JTV2	Anoxybacillus_phage	9.9e-23	42.9
WP_038406155.1\|2854960_2855476_+\|tail	phage major tail protein, TP901-1 family	L0P2Q8	Streptococcus_phage	2.7e-44	61.0
WP_038406156.1\|2855543_2855888_+	hypothetical protein	NA	NA	NA	NA
WP_038406157.1\|2856001_2856301_+	hypothetical protein	A0A1P8BLR3	Lactococcus_phage	1.1e-10	45.7
WP_051962049.1\|2856293_2860814_+	tape measure protein	A0A0B5CU25	Listeria_phage	3.3e-69	58.6
WP_051962050.1\|2860815_2861580_+	hypothetical protein	A0A286QN36	Streptococcus_phage	1.7e-45	41.0
WP_038406160.1\|2861580_2863023_+	hypothetical protein	A0A1X9IGI5	Lactococcus_phage	4.3e-71	38.3
WP_051962051.1\|2863023_2863650_+	hypothetical protein	NA	NA	NA	NA
WP_144242135.1\|2863646_2864021_+	hypothetical protein	NA	NA	NA	NA
WP_038406163.1\|2864025_2864520_+	hypothetical protein	NA	NA	NA	NA
WP_039847054.1\|2864536_2864866_+	DUF2977 domain-containing protein	NA	NA	NA	NA
WP_077915873.1\|2864866_2864992_+	XkdX family protein	A0A059T6D9	Listeria_phage	1.2e-09	72.5
WP_038406164.1\|2865016_2865439_+	hypothetical protein	D7RWK5	Brochothrix_phage	2.7e-05	34.7
2866640:2866691	attR	NA	NA	NA	NA

DBSCAN-SWA_199

2872664 : 2882460

uncultured_virus(40.0%)

protease,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003731954.1\|2872664_2873687_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	8.1e-64	42.3
WP_012951871.1\|2874230_2875190_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_012951870.1\|2875213_2877166_-	ABC-F type ribosomal protection protein	A0A2K9L0W2	Tupanvirus	7.4e-58	29.3
WP_003722329.1\|2877476_2878124_+	redox-sensing transcriptional repressor Rex	NA	NA	NA	NA
WP_003722328.1\|2878150_2878354_-	DUF4305 domain-containing protein	NA	NA	NA	NA
WP_003731957.1\|2878355_2879042_-\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003726504.1\|2879277_2879562_+	co-chaperone GroES	A0A221S3C8	uncultured_virus	9.8e-20	54.3
WP_003726503.1\|2879597_2881226_+	chaperonin GroEL	A0A219YK78	uncultured_virus	1.8e-158	57.0
WP_012951869.1\|2881482_2882460_+	choloylglycine hydrolase family protein	M1HS66	Paramecium_bursaria_Chlorella_virus	7.8e-24	29.2

DBSCAN-SWA_200

2887095 : 2896498

uncultured_Mediterranean_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951866.1\|2887095_2887839_-	potassium channel family protein	A0A1B0Y2S3	Lactobacillus_phage	4.7e-13	32.4
WP_003731964.1\|2887946_2888864_-	heme A synthase	NA	NA	NA	NA
WP_003731965.1\|2889100_2890006_+	protoheme IX farnesyltransferase	NA	NA	NA	NA
WP_031645478.1\|2890152_2891208_+	CAP domain-containing protein	A0A0E3T7R5	Bacillus_phage	2.5e-15	34.9
WP_003724095.1\|2891255_2891705_+	YlbF family regulator	NA	NA	NA	NA
WP_003726138.1\|2891735_2892017_+	YlbG family protein	NA	NA	NA	NA
WP_003731966.1\|2892113_2892671_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA
WP_012951864.1\|2892673_2893156_+	pantetheine-phosphate adenylyltransferase	A0A1B1IVQ3	uncultured_Mediterranean_phage	1.4e-26	43.5
WP_012951863.1\|2893174_2894215_+	PDZ domain-containing protein	NA	NA	NA	NA
WP_012951862.1\|2894257_2896498_-	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	1.6e-141	34.6

DBSCAN-SWA_201

2923578 : 2932765

Paramecium_bursaria_Chlorella_virus(25.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951847.1\|2923578_2925033_-	L-aspartate oxidase	M1HTN0	Paramecium_bursaria_Chlorella_virus	4.0e-24	27.3
WP_012951846.1\|2925164_2926271_+	cysteine desulfurase	A0A2K9L2Y3	Tupanvirus	7.8e-12	23.5
WP_012951845.1\|2926275_2926797_+	transcription repressor NadR	NA	NA	NA	NA
WP_003723184.1\|2926890_2927418_+	DivIVA domain-containing protein	NA	NA	NA	NA
WP_038406165.1\|2927700_2930466_+\|tRNA	isoleucine--tRNA ligase	A0A1V0SJ93	Klosneuvirus	2.8e-87	27.9
WP_010989871.1\|2930577_2931567_+	diaminopimelate epimerase	NA	NA	NA	NA
WP_003739396.1\|2931580_2932276_+	phosphatase PAP2 family protein	NA	NA	NA	NA
WP_003723180.1\|2932564_2932765_+	cold-shock protein	Q9AZD3	Lactococcus_phage	1.7e-18	66.2

DBSCAN-SWA_202

2959882 : 2961184

Geobacillus_virus(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951836.1\|2959882_2961184_+	pyrimidine-nucleoside phosphorylase	A0A0H3UZD4	Geobacillus_virus	2.3e-132	59.2

DBSCAN-SWA_203

2966432 : 2971435

Micromonas_sp._RCC1109_virus(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723152.1\|2966432_2967971_-	2-isopropylmalate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	8.6e-09	25.5
WP_012951833.1\|2968128_2969124_-	ketol-acid reductoisomerase	NA	NA	NA	NA
WP_003723150.1\|2969221_2969713_-	acetolactate synthase small subunit	NA	NA	NA	NA
WP_012951831.1\|2969713_2971435_-	biosynthetic-type acetolactate synthase large subunit	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	9.5e-57	29.1

DBSCAN-SWA_204

2975524 : 2977000

Cyanophage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012951829.1\|2975524_2977000_-	glucose-6-phosphate dehydrogenase	H6WFS4	Cyanophage	8.6e-83	36.2

DBSCAN-SWA_205

2985529 : 2988199

Lactobacillus_phage(100.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003723133.1\|2985529_2986729_-	toxic anion resistance protein	A0A291I9K4	Lactobacillus_phage	8.4e-36	29.1
WP_003723132.1\|2986706_2987366_-	hypothetical protein	NA	NA	NA	NA
WP_003723131.1\|2987641_2988199_+	NUDIX hydrolase	A0A2K9VDH1	Lactobacillus_phage	5.3e-17	34.8

Anti-CRISPR protein detection

Acr_ID: NZ_CP009258.1|WP_003733687.1|2597370_2597565_+|hypothetical-protein

Click the colored protein region to show detailed information

Acr_ID: NZ_CP009258.1|WP_038406113.1|2595391_2596099_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP009258.1|WP_003733687.1|2597370_2597565_+|hypothetical-protein

2597370_2597565_+

64 aa aa

2590891-2630991

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP009258_1	Orphan	1.8\|1530831\|35\|NZ_CP009258\|CRT	1530831-1530865	35	2623896-2623930	0

1. spacer 1.8|1530831|35|NZ_CP009258|CRT matches to NZ_CP009258 position: 2623896-2623930, mismatch: 0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

NZ_CP009258.1|WP_038406113.1|2595391_2596099_-|hypothetical-protein

2595391_2596099_-

235 aa aa

2590891-2630991

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP009258_1	Orphan	1.8\|1530831\|35\|NZ_CP009258\|CRT	1530831-1530865	35	2623896-2623930	0

1. spacer 1.8|1530831|35|NZ_CP009258|CRT matches to NZ_CP009258 position: 2623896-2623930, mismatch: 0

gaaattgtaaaatctatatccgttgattcaacaaa	CRISPR spacer
gaaattgtaaaatctatatccgttgattcaacaaa	Protospacer
***********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009258

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

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Click the colored protein region to show detailed information