CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_HG813244	Staphylococcus epidermidis PM221 plasmid 3, complete sequence	0 crisprs	NA	0	0
NZ_HG813246	Staphylococcus epidermidis PM221 plasmid 1, complete sequence	0 crisprs	NA	0	0
NZ_HG813243	Staphylococcus epidermidis PM221 plasmid 4, complete sequence	0 crisprs	NA	0	0
NZ_HG813242	Staphylococcus epidermidis PM221	4 crisprs	csa3,cas3,DEDDh,DinG,RT,WYL	1	8
NZ_HG813245	Staphylococcus epidermidis PM221 plasmid 2, complete sequence	0 crisprs	NA	0	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_HG813242_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_HG813242_1

531285-531380

Orphan

Consensus_repeat	Method
CATAAGTGACACAAGCAATTAAAAATTGCAGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_HG813242_1

>merge|NZ_HG813242|1|531285-531380|CRISPRCasFinder
CATAAGTGACACAAGCAATTAAAAATTGCAGTGAAAAAGAGGAACGCCTGAGCAAAGCTCAAGCATAAGTGACACAAGCAATTAAAAATTGCAGTG

>NZ_HG813242|1|1|531285-531380|CRISPRCasFinder
CATAAGTGACACAAGCAATTAAAAATTGCAGTG	AAAAAGAGGAACGCCTGAGCAAAGCTCAAG
CATAAGTGACACAAGCAATTAAAAATTGCAGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_HG813242.1\|WP_001831968.1\|531458_531845_+\|topiosmerase	unknown	unknown	gnl\|CDD\|224572
NZ_HG813242.1\|WP_001831898.1\|537830_539138_+\|Fe-S-cluster-assembly-protein-SufD	unknown	unknown	gnl\|CDD\|223791
NZ_HG813242.1\|WP_001831944.1\|536974_537736_+\|Fe-S-cluster-assembly-ATPase-SufC	unknown	unknown	gnl\|CDD\|223473
NZ_HG813242.1\|WP_001831893.1\|535202_535361_-\|hypothetical-protein	unknown	unknown	unknown
NZ_HG813242.1\|WP_001829615.1\|525437_526025_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_HG813242.1\|WP_002438979.1\|530818_531199_+\|glycine-cleavage-system-protein-GcvH	unknown	unknown	gnl\|CDD\|234918
NZ_HG813242.1\|WP_002494702.1\|532386_533412_+\|methionine-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224058
NZ_HG813242.1\|WP_001831907.1\|529825_530149_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_HG813242.1\|WP_001831988.1\|534120_534933_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_HG813242.1\|WP_001829648.1\|527381_527537_+\|hypothetical-protein	unknown	unknown	unknown
NZ_HG813242.1\|WP_001831939.1\|535792_536653_-\|DUF368-domain-containing-protein	unknown	unknown	gnl\|CDD\|224946
NZ_HG813242.1\|WP_001829623.1\|526295_526796_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|372596
NZ_HG813242.1\|WP_038399438.1\|529100_529643_+\|nitroreductase	unknown	unknown	gnl\|CDD\|380312
NZ_HG813242.1\|WP_001831967.1\|535535_535727_+\|CsbD-family-protein	unknown	unknown	gnl\|CDD\|225777
NZ_HG813242.1\|WP_001831974.1\|528303_529020_+\|type-I-3-dehydroquinate-dehydratase	unknown	unknown	gnl\|CDD\|184156
NZ_HG813242.1\|WP_001831936.1\|531837_532134_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_HG813242.1\|WP_001831910.1\|533404_534100_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_HG813242.1\|WP_002457224.1\|524987_525224_-\|hypothetical-protein	unknown	unknown	unknown
NZ_HG813242.1\|WP_002457221.1\|527720_528143_-\|organic-hydroperoxide-resistance-protein	unknown	unknown	gnl\|CDD\|274649
NZ_HG813242.1\|WP_001831965.1\|530291_530645_+\|arsenate-reductase-family-protein	unknown	unknown	gnl\|CDD\|239334

Protein	Function_ID	Function_description	E-value
NZ_HG813242.1\|WP_001831968.1\|531458_531845_+\|topiosmerase	gnl\|CDD\|224572	COG1658, COG1658, Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair].	1.04994e-30
NZ_HG813242.1\|WP_001831898.1\|537830_539138_+\|Fe-S-cluster-assembly-protein-SufD	gnl\|CDD\|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	4.59041e-133
NZ_HG813242.1\|WP_001831944.1\|536974_537736_+\|Fe-S-cluster-assembly-ATPase-SufC	gnl\|CDD\|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	1.04582e-150
NZ_HG813242.1\|WP_001829615.1\|525437_526025_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.38205e-50
NZ_HG813242.1\|WP_002438979.1\|530818_531199_+\|glycine-cleavage-system-protein-GcvH	gnl\|CDD\|234918	PRK01202, PRK01202, glycine cleavage system protein GcvH.	1.44293e-69
NZ_HG813242.1\|WP_001831907.1\|529825_530149_-\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.68543e-25
NZ_HG813242.1\|WP_001831988.1\|534120_534933_+\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	6.16978e-110
NZ_HG813242.1\|WP_001831939.1\|535792_536653_-\|DUF368-domain-containing-protein	gnl\|CDD\|224946	COG2035, COG2035, Predicted membrane protein [Function unknown].	5.03423e-64
NZ_HG813242.1\|WP_001829623.1\|526295_526796_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|372596	pfam13420, Acetyltransf_4, Acetyltransferase (GNAT) domain.	1.80445e-49
NZ_HG813242.1\|WP_038399438.1\|529100_529643_+\|nitroreductase	gnl\|CDD\|380312	cd02135, YdjA-like, nitroreductase family protein similar to Escherichia coli YdjA. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	1.46732e-52
NZ_HG813242.1\|WP_001831967.1\|535535_535727_+\|CsbD-family-protein	gnl\|CDD\|225777	COG3237, COG3237, Uncharacterized protein conserved in bacteria [Function unknown].	0.000312009
NZ_HG813242.1\|WP_001831974.1\|528303_529020_+\|type-I-3-dehydroquinate-dehydratase	gnl\|CDD\|184156	PRK13575, PRK13575, type I 3-dehydroquinate dehydratase.	1.58421e-151
NZ_HG813242.1\|WP_001831936.1\|531837_532134_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	1.51609e-11
NZ_HG813242.1\|WP_001831910.1\|533404_534100_+\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	8.39327e-99
NZ_HG813242.1\|WP_002494702.1\|532386_533412_+\|methionine-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224058	COG1135, AbcC, ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism].	2.7556e-167
NZ_HG813242.1\|WP_002457221.1\|527720_528143_-\|organic-hydroperoxide-resistance-protein	gnl\|CDD\|274649	TIGR03561, organ_hyd_perox, peroxiredoxin, Ohr subfamily. pfam02566, OsmC-like protein, contains several deeply split clades of homologous proteins. The clade modeled here includes the protein Ohr, or organic hydroperoxide resistance protein. [Cellular processes, Detoxification].	2.58332e-60
NZ_HG813242.1\|WP_001831965.1\|530291_530645_+\|arsenate-reductase-family-protein	gnl\|CDD\|239334	cd03036, ArsC_like, Arsenate Reductase (ArsC) family, unknown subfamily; uncharacterized proteins containing a CXXC motif with similarity to thioredoxin (TRX)-fold arsenic reductases, ArsC. Proteins containing a redox active CXXC motif like TRX and glutaredoxin (GRX) function as protein disulfide oxidoreductases, altering the redox state of target proteins via the reversible oxidation of the active site dithiol. ArsC catalyzes the reduction of arsenate [As(V)] to arsenite [As(III)], using reducing equivalents derived from glutathione via GRX, through a single catalytic cysteine.	1.66742e-56

>NZ_HG813242.1|WP_002438979.1|530818_531199_+|glycine-cleavage-system-protein-GcvH
MAVPSEFKYSKEHEWVKIENNVATIGITEYAQNELGDIVFVELPETDDELNEGDTFGSVESVKTVSELYAPISGKIVEVNEELEDSPEFVNESPYEKAWMVKIEISDDSQLEELLSADQYSEMIGE
>NZ_HG813242.1|WP_001831965.1|530291_530645_+|arsenate-reductase-family-protein
MIKFYQYPKCTTCKKAAKFLDEHDVNYESIDIVQHTPTKKEFKNIVDKTGVNINKLFNTHGIKYRELNLKEKLKNMSDDEKLELLASDGMLVKRPLAISGNHLTLGFKENEYQHQWL
>NZ_HG813242.1|WP_001831907.1|529825_530149_-|thioredoxin-family-protein
MKNIHQTEEFNSTIGSTDPVIIKFEADWCPDCKAMDMWIDPIVEKYNNYQWYVVDRDELEDVTTENDVMGIPSILIFQNGKKLAHLHSANAKSPEQVESFLTEHLDQ
>NZ_HG813242.1|WP_038399438.1|529100_529643_+|nitroreductase
MELQEAISNRRSVKKFKHDMVVDDQTVYDAIYKATDAPNHGMREPWRLVHISKDKLGDFSRDITRFAFPDSPDKREDHFHAVTNLGGMLLLILKDDPRQRQSRENYFAFGAFAQNLMLLLYEAGIGTCWKSPQYIFDPKIRKALGVKDNEILAGFLYLADLEEVPTKAKRKNKNLITEFE
>NZ_HG813242.1|WP_001831974.1|528303_529020_+|type-I-3-dehydroquinate-dehydratase
MTHVDIAATIAPEDKLSKTLLKDIKVNEESIDIIELRIDQWPSFNKALLNEVIKQLKIFHLKILVTYRTSVQGGKGAVNEQEYLNILGELIECPQFDMIDIEWSSAVKIEKYTHLVQRAQQKGLEVVLSHHNFQETPALDELKFIYFKMQKLNPEYLKLAVMPKCQEDVLHLLEAMSLTAKHTTCRIVGISMSSLGKVSRIAQGVFGGTLSYGCIEEPQAPGQIHVSKLKSMVSFYED
>NZ_HG813242.1|WP_002457221.1|527720_528143_-|organic-hydroperoxide-resistance-protein
MAVQYETKATNVGGRKGHVHTDDNAINVDVLPPQQADGKATNPEQLFAAGYASCFNGAFDLILKQNKVRDAEPEVTLTVRLEDDPDAESPKLSVDIHAKVKNVLSQEDAEKYLQDAHDFCPYSKATRGNIDVNLNVEVVE
>NZ_HG813242.1|WP_001829648.1|527381_527537_+|hypothetical-protein
MYKEYNLTQHTLPMETSVLIPTNDISRHVNDIVETIPDTEFDEFRHHCGLI
>NZ_HG813242.1|WP_001829623.1|526295_526796_-|GNAT-family-N-acetyltransferase
MNNIRLLNQNDLDSYIELMKFGHHNYEWDRYYLENVSIDRLKTILSNHTDYWNIFGAFEDDELVATCTLKQMNYVGKCHKAILENNFVKNNDEIVNRELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGFENLAFEKNASKIGNEYFDENWLIYSTTESSD
>NZ_HG813242.1|WP_001829615.1|525437_526025_+|histidine-phosphatase-family-protein
MVKTLYLMRHGQTVFNLKGKIQGASDSPLTALGVQQANAAQQYFKTKNIHFDYLYSSPQQRACDTLENAVPNQQYWCVKDLKEWGFGLFEGESIELLRAIKQPRYLYGDAVVPFGGESRSEVEHRVYRALYEMMDTTDGETILAVSHGSTIGLFVRNILGYDKGSKFEIGNCNIVKFEYDGEEFIFKDLINPIKK
>NZ_HG813242.1|WP_002457224.1|524987_525224_-|hypothetical-protein
MSTHSQCNYVNPNSISLDWECLIISKTDMLLDGVPKELINTWLDQNVIEPFCVRNNEINFKTKDVWNALKTHNWYYSN
>NZ_HG813242.1|WP_001831968.1|531458_531845_+|topiosmerase
MAIVNKVIIVEGKSDKKRVQQVIAEPANIICTHGTMSIDKIDNMIETLYDKQVYVLADSDDEGEKIRKWFKRYLSESEHIYVDKTFCEVAKCPKNYLAHVLSRYGFNVKKEKKLMNNLKTERLVLVNE
>NZ_HG813242.1|WP_001831936.1|531837_532134_+|thioredoxin-family-protein
MNKLKDIEDITVNFNKEKHLIFGYTPMCGTCKISERMLDIANEILQLPIKKIDLNFYPEWSKEKQIMSVPVLLLMRREEEIKRIYAFQSVTYLLENLK
>NZ_HG813242.1|WP_002494702.1|532386_533412_+|methionine-ABC-transporter-ATP-binding-protein
MIKLNQIVKRYHTKDKDVLAVDHVDLNIESGSIFGVIGFSGAGKSTLIRMFNNLESPTSGEIIIDGDNISQLSKSQLRKKRQKVSMIFQHFNLLWSRSVLKNVTFPLEIAGVPSGLAKQKALELIELVGLKGRESAYPSELSGGQKQRVGIARALANDPDVLLCDEATSALDPQTTDEILDLLLKVREQQNLTIVLITHEMHVIRRICDEVAVMENGKVIEQGAVSKVFENPQHEVTKRFVKDDLNDDFEDSLEYLEPLDHDAYIVRLNFTGENTTEPIISYMTKTHNIDVNILEADIKNTKNGSLGFLVIHIPHISEEHFKQFKHNLHEQHVNVEVLKHG
>NZ_HG813242.1|WP_001831910.1|533404_534100_+|ABC-transporter-permease
MGKSYGEIFHEMVTMPNVQWPEVWQAILETLYMTVVSTLFAFVFGLILGVLLFLSAKSNSLAAKIFYTIVSFIVNLFRAIPFIILILLLIPFTSILLGTISGPTGALPALIIGAAPFYARLVEIAFKEIDKGVIEAAWSMGANTSIVVRKVLLPEAMPALVSGITVTAIALVGSTAIAGVIGAGGLGNLAYLTGFTRNQNDVILVSTVFILIIVFIIQFLGDWLTNKIDKR
>NZ_HG813242.1|WP_001831988.1|534120_534933_+|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKLFGIILVLALTIALAACGGGKDKEKTITVGASPAPHAEILEKAKPLLKKKGYDLKIKSINDYTTPNKLLDKGEIDANFFQHTPYLNTESKEKGYKIESAGNVELEPMAVYSKKYKSLKDLPKGATVYVSNNPAEQGRFLKFFVDEGLIKLKKGVKIENAKFDDITENKKDIKFNNKQSAEYLPKIYQNQDADAVIINSNYAIDQKLSPKKDSIALESPKDNPYANLIAVKKGHKDDKNIKVLMEVLQSKEIQDYIKDKYDGAVVPAK
>NZ_HG813242.1|WP_001831893.1|535202_535361_-|hypothetical-protein
MKFITIKAITEKGLDKKVNQFLKSHPQIEIIKFDYQMGYSGVSVGILYRDNI
>NZ_HG813242.1|WP_001831967.1|535535_535727_+|CsbD-family-protein
MAEDKFEQAKGNIKETVGNATDNKELEKDGKGDKASGKAKEAVENVKEKANDVIDKFKGNKGD
>NZ_HG813242.1|WP_001831939.1|535792_536653_-|DUF368-domain-containing-protein
MKKFKWINIFKGFGMGTSDLVPGVSGGTIALLLGIYDDFISSISGLFSRRFWPSLKFLLPILVGMLIAIGLLSQLFNYLLSQHHIPTMLFFTGLILGIIPYLLTISNFKKNFSIIHYFILLLGIAIIVVFALLNHGDKHSGETLTLSFSLIIKYFIAGVFASSAMLLPGISGSFMLLVFGVYGTLMYAISELLHFNLNALPIILIVGFGIVTGFMISSRLIQYCLHQHPTMTFALIIGFVIGSLYAVFPGFPKDLIQWIISFFLLITGFLVSYVLGKITAKNEASF
>NZ_HG813242.1|WP_001831944.1|536974_537736_+|Fe-S-cluster-assembly-ATPase-SufC
MSSTLEIKDLHVSIEDKEILKGVNLTINTGEIHAIMGPNGTGKSTLSSAIMGHPSYEVTQGEVLLDGVNILELDVDERAKAGLFLAMQYPSEITGVTNADFMRSAINAKREEGQEINLMQFIKKLDKQMDFLDIDKDMAQRYLNEGFSGGEKKRNEILQLMMLEPKFAILDEIDSGLDIDALKVVSKGINQMRGEEFGALMITHYQRLLNYITPDKVHVMYGGKVVKSGGPELAKRLEEEGYEWVKEEFGAAE
>NZ_HG813242.1|WP_001831898.1|537830_539138_+|Fe-S-cluster-assembly-protein-SufD
MTTKTLNISEEQLVDYSKAHNEPSWMTELRKKALKLTETLEMPKPDKTKLRKWDFDTFKQHHTTGDAYTQLTDLPKSVKEIIDVENSENLIIQHNNELAYTQVSDQAKHDGVIIEGLSEALVNHSDLVQKYFMTKAVDVDEHRLTALHTALVNGGIFVYVPKNTVVEHPIQYVVLHDDEQASFYNHVIIVTEESAEVTYVENYLSTTSGEDNQLNIVSEVIAGANSNVTYGSVDYLDKGFTGHIIRRGSADADASINWALGLMNEGSQIIDNTTNLNGDRSTSALKSVVVGTGDQKINLTSKIVQYGKETDGYILKHGVMKENASSVFNGIGYIKHGGTKSIANQESRVLMLSENARGDANPILLIDEDDVEAGHAASVGRVDPEQLYYLMSRGISRAEAERLVIHGFLDPVVRELPIDDVKRQLREVIERKVSK

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Crispr_ID: NZ_HG813242_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_HG813242_2

890237-890330

Unclear

Consensus_repeat	Method
TGAGGCTCATGTATAAGAAACACTAAATAC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_HG813242_2

>merge|NZ_HG813242|2|890237-890330|CRISPRCasFinder
TGAGGCTCATGTATAAGAAACACTAAATACCTATGTATTAAGTGAAAAGAGGAACACATGAGCTTGAGGCTCATGTATAAGAAACACTAAATAC

>NZ_HG813242|2|2|890237-890330|CRISPRCasFinder
TGAGGCTCATGTATAAGAAACACTAAATAC	CTATGTATTAAGTGAAAAGAGGAACACATGAGCT
TGAGGCTCATGTATAAGAAACACTAAATAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_HG813242.1\|WP_001830156.1\|882551_882926_+\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|224221
NZ_HG813242.1\|WP_001830099.1\|887010_887571_+\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_HG813242.1\|WP_001830158.1\|890780_891518_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_HG813242.1\|WP_002489340.1\|881287_881923_+\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|273588
NZ_HG813242.1\|WP_002457379.1\|896438_896771_+\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_HG813242.1\|WP_002439483.1\|898476_898752_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_HG813242.1\|WP_001830161.1\|889470_890205_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_HG813242.1\|WP_002436293.1\|900224_900575_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_HG813242.1\|WP_001832559.1\|898878_899382_+\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_HG813242.1\|WP_001830107.1\|882005_882194_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_HG813242.1\|WP_001830113.1\|896801_898169_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_HG813242.1\|WP_001833035.1\|891644_895214_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_HG813242.1\|WP_002489349.1\|884803_886852_+\|ATP-dependent-DNA-helicase-RecG	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|236794
NZ_HG813242.1\|WP_001830080.1\|895210_896437_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_HG813242.1\|WP_001830184.1\|890432_890666_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_HG813242.1\|WP_002494426.1\|899381_900119_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_HG813242.1\|WP_001830173.1\|880638_881283_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|238244
NZ_HG813242.1\|WP_001830062.1\|888551_889478_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_HG813242.1\|WP_038399479.1\|882940_884599_+\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
NZ_HG813242.1\|WP_001830112.1\|887572_888550_+\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414

Protein	Function_ID	Function_description	E-value
NZ_HG813242.1\|WP_001830156.1\|882551_882926_+\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|224221	COG1302, COG1302, Uncharacterized protein conserved in bacteria [Function unknown].	1.7844e-34
NZ_HG813242.1\|WP_001830099.1\|887010_887571_+\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	1.79193e-99
NZ_HG813242.1\|WP_001830158.1\|890780_891518_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	2.62918e-117
NZ_HG813242.1\|WP_002489340.1\|881287_881923_+\|thiamine-diphosphokinase	gnl\|CDD\|273588	TIGR01378, Thiamine_pyrophosphokinase, thiamine pyrophosphokinase. This model has been revised. Originally, it described strictly eukaryotic thiamine pyrophosphokinase. However, it is now expanded to include also homologous enzymes, apparently functionally equivalent, from species that rely on thiamine pyrophosphokinase rather than thiamine-monophosphate kinase (TIGR01379) to produce the active TPP cofactor. This includes the thiamine pyrophosphokinase from Bacillus subtilis, previously designated YloS. [Biosynthesis of cofactors, prosthetic groups, and carriers, Thiamine].	1.92855e-73
NZ_HG813242.1\|WP_002457379.1\|896438_896771_+\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	2.69203e-43
NZ_HG813242.1\|WP_002439483.1\|898476_898752_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	4.31598e-41
NZ_HG813242.1\|WP_001830161.1\|889470_890205_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.64489e-139
NZ_HG813242.1\|WP_002436293.1\|900224_900575_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.1359e-69
NZ_HG813242.1\|WP_001832559.1\|898878_899382_+\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.61565e-69
NZ_HG813242.1\|WP_001830107.1\|882005_882194_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.3072e-18
NZ_HG813242.1\|WP_001830113.1\|896801_898169_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_HG813242.1\|WP_001833035.1\|891644_895214_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_HG813242.1\|WP_002489349.1\|884803_886852_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_HG813242.1\|WP_001830080.1\|895210_896437_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_HG813242.1\|WP_001830184.1\|890432_890666_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.2999e-31
NZ_HG813242.1\|WP_002494426.1\|899381_900119_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	3.01733e-167
NZ_HG813242.1\|WP_001830173.1\|880638_881283_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|238244	cd00429, RPE, Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.	3.21388e-115
NZ_HG813242.1\|WP_001830062.1\|888551_889478_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	3.80169e-127
NZ_HG813242.1\|WP_038399479.1\|882940_884599_+\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0
NZ_HG813242.1\|WP_001830112.1\|887572_888550_+\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	3.1764e-175

>NZ_HG813242.1|WP_001830161.1|889470_890205_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MNKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_HG813242.1|WP_001830062.1|888551_889478_+|ACP-S-malonyltransferase
MGKIAVVFPGQGAQKVGMASDLYNEEERSTRVLNLAQETVDFDLLETMFTDNDGKLGETENTQPALLTHSVALLESLNHLKVDYTMGHSLGEYSSLVASGVLSFEDAVRIVRKRGQLMARAFPNGVGGMAAVLGLDYDDVDKICQTLSTKEQLIEPANINSPGQIVVSGHKSLIDELVKKGKELGAKRVLPLAVSGPFHSSMMKVIEEDFANFINQFEWHNANYPVVQNVNAKGETDAEVIKRNMVKQLYSPVQFIQSTKWLINQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNNHE
>NZ_HG813242.1|WP_001830112.1|887572_888550_+|phosphate-acyltransferase-PlsX
MVKIAVDMMGGDDAPGIVLDAVKKAVEDFKDLEIILFGDESQYNLSHERIEFRHCTEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTTDGKGFVFLDVGANADAKAEHLLQYAQLGNIYAQKIRGIQNPSVSLLNIGTEAAKGNSLTKKAYDLFEKNQSFNFTGNIEAKTLMDGNVDVVVTDGYTGNMVLKNLEGTAKSIGKMLKETIMSSFKNKLAGAVLKKDLETFAKKMDYSEYGGSVLLGLDGTVVKAHGSSNAKAFYSAIKQAKIAGEENIVQIMKDTVGE
>NZ_HG813242.1|WP_001830099.1|887010_887571_+|transcription-factor-FapR
MKLKKNDRRVAIKEAIELNPFITDYELCEKFDVSIQTIRLDRTHLNIPELRKRIKLVAEQNYGRIKSIEANEIIGDLIQVNPDVSAQSLIEITIDSVFAKSEIARGHVLFAQANSLCVALIHKPIVLTHESQVEFKEKVKLNDTVRADARVIDITDKHYIIEVNSYVSDMLVFKGKFKMYYTSEDE
>NZ_HG813242.1|WP_002489349.1|884803_886852_+|ATP-dependent-DNA-helicase-RecG
MSKVHLIESPYALDKIKGIGPKRLALLEELNIKSVEDLVLYLPTRYEDNTVIDLNQADDKATVTVQGEVYSSPTVAFFGRNKSKLTVHLMINHIAVKCVFFNQPYLKKKLELNSIVTIKGKWNRNKQEINGNRIFFKDQKNQEDTHLEPIYRIKEGIKQKQLRDNIRQALSDVTIHEWLTDDLREKYKLETLAYTIQTLHHPINKQNLLRARRTYAFTELFMFELRMQWLNRLEKTSDEAIEINYDINKVKQFIDSLPFELTDAQKVSVNEIFRDLKAPIRMHRLLQGDVGSGKTVVAAICMYALKTAGYQSALMVPTEILAEQHAESLIQLFGNTMNVALLTGSVKGKKRRLLLEQLENGTIDCLIGTHALIQDDVVFNNVGLVITDEQHRFGVNQRQILREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPIKTSWAKHEQYDQVLAQMSNELKKGRQAYVICPLIESSEHLEDVQNVVALYESLQSDYGNEKVGLLHGKMSAEDKDQVMQKFSKHEIDILVSTTVVEVGVNVPNATFMMIYDADRFGLSTLHQLRGRVGRSEHQSYCVLIASPKTETGIERMTIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANVVEDYRMLEVARDEAAELIQSGQFFEQQYSHLREFIKQNLRHIRFD
>NZ_HG813242.1|WP_038399479.1|882940_884599_+|DAK2-domain-containing-protein
MISKINGKLFADMIIQGAQNLSNNADLVDSLNVYPVPDGDTGTNMNLTITSGREEVENNLSQNIGELGKTFSKGLLMGARGNSGVILSQLFRGFCKNIEEEKEISVQQFAESFQAGVETAYKAVMKPVEGTILTVAKDAAKAAMDYVDQAEDCVDLMAHVIEAASESLDNTPNLLAVLKEVGVVDSGGKGLLCVYEGFLKGLKGEKIEAQAPKLDTESFVNDDHDFHGVINTEDIVYGYCTEMMVRFGKNKKAFDEQEFRNDMSEFGDSLLVINDDEIVKVHVHTEHPGDVFNYGQKYGELIKLKVENMREQHREVIRKEQDGLQNKEANESQTVETAIVTISVGDGIAELFESMGATHIISGGQTMNPSTEDIVKVIEQSQCKRAIILPNNKNIMMASEQAASIVEAETVVIPTKSIPQGISALFQYDLESSLEDNKRHMSDALETVQSGSITFAVRDTKIDGIEIKKDEFMGLAEDKIVTSDVNQFHAVKGLLSKLLNEDSEILTMISGEDADNSITNQIIDWIESEYPDVEVEQHEGGQPIYQYFFAVE
>NZ_HG813242.1|WP_001830156.1|882551_882926_+|Asp23/Gls24-family-envelope-stress-response-protein
MTLEISNDYGKIDISNDVIASVVGGKAVESYGIVGMASRQQVRDGIAEILGHDNYAKGIKVREDNGIIDVDMYIIVSYGVKISEVASNLQSTVKYTLEKTLNVKVNSINIFVQGVRVNETVKKV
>NZ_HG813242.1|WP_001830107.1|882005_882194_-|50S-ribosomal-protein-L28
MGKQCFVTGRKASTGNHRSHALNANKRRWNANLQKVRILVDGKPKKVWVSARALKSGKVTRV
>NZ_HG813242.1|WP_002489340.1|881287_881923_+|thiamine-diphosphokinase
MKINLLCSQRLLPNHIFEKEKDSNWAGIDRGALILVKQGIQPIFSVGDFDSVNNEERLMLMKNLHIEPVEAEKDDTDLALGVAQAVERGYTEITIYGATGGRLDHFMGVLQILQKPQYLHQSIKIKVIDQQNHIQLLNEGKYVINRDSTYPYISFIPLNDKTILTLQGFKYNLNQEHLNLGSTLTISNEVKVNEAIIRVEQGTVLKIRSRD
>NZ_HG813242.1|WP_001830173.1|880638_881283_+|ribulose-phosphate-3-epimerase
MVKILPSLLSIDFLNLKEELQLLETAKVDGLHFDVMDGKFVPNISIGIPILDAVRQQSHLPIDVHLMIEQPENYINLFAEHGADMISVHVESTTHIHRAIEQIKQLGKKAGVVINPGTSVETILPILSIVDYVLVMTVNPGFGGQTFIEQCVTKIEQLNQLKHENHLTFDIEVDGGINDQTSKRCVEQGATMLVTGSYFFKQEDYAKVTSLLKE
>NZ_HG813242.1|WP_001830184.1|890432_890666_+|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK
>NZ_HG813242.1|WP_001830158.1|890780_891518_+|ribonuclease-III
MANQKKKEMVHNFQQKFTDKMKSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHLPEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLDQGLDSVWTFAEKVIFPYVEDDELVGVVDFKTQFQEYVHSQNKGDVTYQLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKLMKNKKSL
>NZ_HG813242.1|WP_001833035.1|891644_895214_+|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGAKMEDIIFSGAEHRKAQNFAEVKLKLDNHSQKLQIDSEELVVTRRLYRSGESEYYLNNDRARLKDIIDLFLDSGLGKEAFSIISQGRVDEILNAKPINRRQIIEESAGVLKYKKRKAESIQKLDHTEDNLNRVEDILYDLEGRVEPLKEEAAIAKEYKQLSKEMEQSDVIVTVSDIDHYTEDNQRLDERLNHLKSQQAEKEGQQAQINQLLQKYKGKRQQNDYDIEKLNYELVKATENYEQLSGKLNVLEERKKNQSETNARYEEELDNLESQIDSIKNEKAQNEKLLAELKNKQKQLNKEVQELESLLYISDEQHDEKLEEIKNSYYTLMSEQSDVNNDIRFLEHTINENEAKKSRLDSRLVEAFNQLKDIQQNITQTQKEYQSSKKSMEKVEQNIQQLEQQLTDSKRLLSEYENKLYQAYRYNEKLKSRIDSLATQEEDYTYFFNGVKHILKAKDKELRGIHGAVAEVINVPSEMTQAIETALGASLQHVIVDNEKDGRQAIQYLKQRGLGRATFLPLNVIQPRHVAADIKDVARGSQGFINIASDAINVSAKYQNIIENLLGNTIIVENLKHANELARAIRYRTRIVTLEGDVVNPGGSMTGGGARKTKSILSQKDELSTMRNQLEDYQRQTAEFERQFKEQKTQAEQLSEQYFSASQQYNNLKEQVHHHELELDRLKTQEAHLKNEHEEFEFEKNDGYQSDKSKETLKEKQNHLIEIQQQLKQLESDIERYTQLSKEGKASTHQTQQQLHQKQSDLAVVKERIKSQKQVYERLDKQLSDSERQKIEVNEKIKLFNSDEMMGKDAFEKLKEQIQQQENVRQNLNQQLSEIKQQRKDLNEKIEINESQLQKCHQDILSIENHYQDIKAKQSKLDVLINHAIDHLNDTYQLTVERARMEYDSDETIDNLRKKVKLTKMSIDELGPVNLNAIEQFEELNERYTFLNEQRTDLREAKETLEQIIHEMDKEVEGRFKTTFHAVQDHFTTVFKQLFGGGQAELRLTEDDYLSAGVDIIVQPPGKKLQHLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQYLNELSTETQFIVITHRKGTMEFSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEEQA
>NZ_HG813242.1|WP_001830080.1|895210_896437_+|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFSSKSEDDIQKDLDETVDSNANSDSDSMDPNDSDEQVKPKKKPKKLSEADFDEDGLISIEDFEEIEAQKIGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMKLTDELRTEAQRRNIQETEDLREVIVEKIVEIYHQEDDHSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAYRYQQEGKKVMLAAGDTFRAGAIQQLNVWGERVGVEVVSQNEGSDPAAVVYDAINAAKNKGVDILICDTAGRLQNKSNLMQELDKMKRVINRAIPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKMDDLQPFNPESYVYGLFADMIEQNEDIPEEISRNSSVESEEGN
>NZ_HG813242.1|WP_002457379.1|896438_896771_+|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQKNYLELFYLQDYSLSEIADTFEVSRQAVYDNIRRTGDLVEDYESKLRLYQRFEKRRELYNLMKQSLNQPELLKQYITQLEELE
>NZ_HG813242.1|WP_001830113.1|896801_898169_+|signal-recognition-particle-protein
MAFEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKAKRNQMQNMLKGMNLPF
>NZ_HG813242.1|WP_002439483.1|898476_898752_+|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQLGTYNPAHVNAPEVKIDEELALKWLHDGAKPTDTVHNILSREGILKKFDEQKNAK
>NZ_HG813242.1|WP_001832559.1|898878_899382_+|ribosome-maturation-factor-RimM
MEVEVGQIVNTHGIKGEVKVKSNSDFTETRFQPGEQLLVKHNNTEIVYTVASYRIHKGFHMLRFEGINNINEIEHLKGDYIYQERDHQDIELGEHEYYYSDIIGCTVFKDDDTPIGRVINIFETGANDVWVVKGEKEYLIPYIEDVVKDIDIETKTIKITPMEGLLD
>NZ_HG813242.1|WP_002494426.1|899381_900119_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFEGVLNHSILKRAQDKGIINVNTINFRDYSINKHNQVDDYPFGGGQGMVLKPEPVFNAMEDINHNEHTRVILMCPQGRPFTQEIAQELSEAKHIVFICGHYEGYDERIRKHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNQASHQDDSFSEGLLEFPQYTRPREYKNMSVPEVLLSGNHAHIDQWRHEQKLIRTYEKRPDLLEQYPLTEKDREILETYKKKLKND
>NZ_HG813242.1|WP_002436293.1|900224_900575_+|50S-ribosomal-protein-L19
MSNHKLIEAVTKSQLRTDLPTFRSGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR

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Crispr_ID: NZ_HG813242_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_HG813242_3

898258-898348

Unclear

Consensus_repeat	Method
AACGCCTGAGCTAAAGCGCATGCATAACC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_HG813242_3

>merge|NZ_HG813242|3|898258-898348|CRISPRCasFinder
AACGCCTGAGCTAAAGCGCATGCATAACCTAAAGTATCATTTACTTCGTAAAAGAGTATTGGAACGCCTGAGCTAAAGCACATGCATAACC

>NZ_HG813242|3|3|898258-898348|CRISPRCasFinder
AACGCCTGAGCTAAAGCGCATGCATAACC	TAAAGTATCATTTACTTCGTAAAAGAGTATTGG
AACGCCTGAGCTAAAGCACATGCATAACC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_HG813242.1\|WP_001833035.1\|891644_895214_+\|chromosome-segregation-protein-SMC	unknown	unknown	gnl\|CDD\|224117
NZ_HG813242.1\|WP_001830099.1\|887010_887571_+\|transcription-factor-FapR	unknown	unknown	gnl\|CDD\|179847
NZ_HG813242.1\|WP_001830158.1\|890780_891518_+\|ribonuclease-III	unknown	unknown	gnl\|CDD\|234633
NZ_HG813242.1\|WP_001830184.1\|890432_890666_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_HG813242.1\|WP_002457379.1\|896438_896771_+\|putative-DNA-binding-protein	unknown	unknown	gnl\|CDD\|234647
NZ_HG813242.1\|WP_002494425.1\|901104_903705_-\|YfhO-family-protein	unknown	unknown	gnl\|CDD\|226888
NZ_HG813242.1\|WP_002439483.1\|898476_898752_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_HG813242.1\|WP_001829514.1\|907494_908265_+\|ribonuclease-HII	unknown	unknown	gnl\|CDD\|260003
NZ_HG813242.1\|WP_001832559.1\|898878_899382_+\|ribosome-maturation-factor-RimM	unknown	unknown	gnl\|CDD\|234650
NZ_HG813242.1\|WP_001830161.1\|889470_890205_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_HG813242.1\|WP_002468914.1\|903697_906298_-\|YfhO-family-protein	unknown	unknown	gnl\|CDD\|370572
NZ_HG813242.1\|WP_002439496.1\|908372_909539_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	unknown	unknown	gnl\|CDD\|234813
NZ_HG813242.1\|WP_001830113.1\|896801_898169_+\|signal-recognition-particle-protein	unknown	unknown	gnl\|CDD\|236780
NZ_HG813242.1\|WP_001830080.1\|895210_896437_+\|signal-recognition-particle-docking-protein-FtsY	unknown	unknown	gnl\|CDD\|236686
NZ_HG813242.1\|WP_002436293.1\|900224_900575_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_HG813242.1\|WP_002494426.1\|899381_900119_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	unknown	unknown	gnl\|CDD\|234581
NZ_HG813242.1\|WP_002446283.1\|909560_910469_+\|succinate--CoA-ligase-subunit-alpha	unknown	unknown	gnl\|CDD\|180194
NZ_HG813242.1\|WP_001830062.1\|888551_889478_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_HG813242.1\|WP_001830112.1\|887572_888550_+\|phosphate-acyltransferase-PlsX	unknown	unknown	gnl\|CDD\|235414
NZ_HG813242.1\|WP_001829495.1\|906626_907490_+\|ribosome-biogenesis-GTPase-YlqF	unknown	unknown	gnl\|CDD\|236570

Protein	Function_ID	Function_description	E-value
NZ_HG813242.1\|WP_001833035.1\|891644_895214_+\|chromosome-segregation-protein-SMC	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0
NZ_HG813242.1\|WP_001830099.1\|887010_887571_+\|transcription-factor-FapR	gnl\|CDD\|179847	PRK04424, PRK04424, transcription factor FapR.	1.79193e-99
NZ_HG813242.1\|WP_001830158.1\|890780_891518_+\|ribonuclease-III	gnl\|CDD\|234633	PRK00102, rnc, ribonuclease III; Reviewed.	2.62918e-117
NZ_HG813242.1\|WP_001830184.1\|890432_890666_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.2999e-31
NZ_HG813242.1\|WP_002457379.1\|896438_896771_+\|putative-DNA-binding-protein	gnl\|CDD\|234647	PRK00118, PRK00118, putative DNA-binding protein; Validated.	2.69203e-43
NZ_HG813242.1\|WP_002494425.1\|901104_903705_-\|YfhO-family-protein	gnl\|CDD\|226888	COG4485, COG4485, Predicted membrane protein [Function unknown].	0
NZ_HG813242.1\|WP_002439483.1\|898476_898752_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	4.31598e-41
NZ_HG813242.1\|WP_001829514.1\|907494_908265_+\|ribonuclease-HII	gnl\|CDD\|260003	cd07182, RNase_HII_bacteria_HII_like, Bacterial Ribonuclease HII-like. This family includes mostly bacterial type 2 RNases H, with some eukaryotic members. Bacterial RNase HII has a role in primer removal based on its involvement in ribonucleotide-specific catalytic activity in the presence of RNA/DNA hybrid substrates. Several bacteria, such as Bacillus subtilis, have two different type II RNases H, RNases HII and HIII; double deletion of these leads to cellular lethality. It appears that type I and type II RNases H also have overlapping functions in cells, as over-expression of Escherichia coli RNase HII can complement an RNase HI deletion phenotype. In Leishmania mitochondria, of the four distinct RNase H genes (H1, HIIA, HIIB, HIIC), HIIC is essential for the survival of the parasite and thus can be a potential target for anti-leishmanial chemotherapy. Ribonuclease H (RNase H) is classified into two families, type I (prokaryotic RNase HI, eukaryotic RNase H1 and viral RNase H) and type II (prokaryotic RNase HII and HIII, and eukaryotic RNase H2). RNase H endonucleolytically hydrolyzes an RNA strand when it is annealed to a complementary DNA strand in the presence of divalent cations, in DNA replication and repair.	3.62396e-100
NZ_HG813242.1\|WP_001832559.1\|898878_899382_+\|ribosome-maturation-factor-RimM	gnl\|CDD\|234650	PRK00122, rimM, 16S rRNA-processing protein RimM; Provisional.	1.61565e-69
NZ_HG813242.1\|WP_001830161.1\|889470_890205_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.64489e-139
NZ_HG813242.1\|WP_002468914.1\|903697_906298_-\|YfhO-family-protein	gnl\|CDD\|370572	pfam09586, YfhO, Bacterial membrane protein YfhO. This protein is a conserved membrane protein. The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system. Some members of this family have been annotated as glycosyl transferases of the PMT family.	4.58732e-168
NZ_HG813242.1\|WP_002439496.1\|908372_909539_+\|ADP-forming-succinate--CoA-ligase-subunit-beta	gnl\|CDD\|234813	PRK00696, sucC, ADP-forming succinate--CoA ligase subunit beta.	0
NZ_HG813242.1\|WP_001830113.1\|896801_898169_+\|signal-recognition-particle-protein	gnl\|CDD\|236780	PRK10867, PRK10867, signal recognition particle protein; Provisional.	0
NZ_HG813242.1\|WP_001830080.1\|895210_896437_+\|signal-recognition-particle-docking-protein-FtsY	gnl\|CDD\|236686	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional.	0
NZ_HG813242.1\|WP_002436293.1\|900224_900575_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	4.1359e-69
NZ_HG813242.1\|WP_002494426.1\|899381_900119_+\|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD	gnl\|CDD\|234581	PRK00026, trmD, tRNA (guanine-N(1)-)-methyltransferase; Reviewed.	3.01733e-167
NZ_HG813242.1\|WP_002446283.1\|909560_910469_+\|succinate--CoA-ligase-subunit-alpha	gnl\|CDD\|180194	PRK05678, PRK05678, succinyl-CoA synthetase subunit alpha; Validated.	0
NZ_HG813242.1\|WP_001830062.1\|888551_889478_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	3.80169e-127
NZ_HG813242.1\|WP_001830112.1\|887572_888550_+\|phosphate-acyltransferase-PlsX	gnl\|CDD\|235414	PRK05331, PRK05331, phosphate acyltransferase PlsX.	3.1764e-175
NZ_HG813242.1\|WP_001829495.1\|906626_907490_+\|ribosome-biogenesis-GTPase-YlqF	gnl\|CDD\|236570	PRK09563, rbgA, GTPase YlqF; Reviewed.	7.55244e-160

>NZ_HG813242.1|WP_001830113.1|896801_898169_+|signal-recognition-particle-protein
MAFEGLSDRLQATMQKMRGKGKVTEADIKTMMREVRLALLEADVNFKVVKEFVKTVSERALGSDVMQSLTPGQQVIKIVQEELTSLMGGENTSIKMANKPPTVVMMVGLQGAGKTTTAGKLALLMRKKYNKKPLLVAGDIYRPAAIDQLQTVGKQIDIPVYSEGDQVSPQQIVENALKHAKEEHLDFVIIDTAGRLHIDEALMNELQEVKEISKPDEIMLVVDAMTGQDAVNVAQSFDEQLDVSGVTLTKLDGDTRGGAALSIRSVTQKPIKFVGMSEKLDGLELFHPERMASRILGMGDVLSLIEKAQQDVDQEKAKDLEKKMRESSFTLDDFLEQLDQVKNLGPLDDIMKMIPGMNKMKGLDKLNMSDKQIDHIKAIIQSMTPKERSNPETLNVSRKKRIAKGSGRSLQEVNRLMKQFNDMKKMMKQFTGGGKGKKAKRNQMQNMLKGMNLPF
>NZ_HG813242.1|WP_002457379.1|896438_896771_+|putative-DNA-binding-protein
MGQNDLVKTLRMNYLFDFYQSLLTNKQKNYLELFYLQDYSLSEIADTFEVSRQAVYDNIRRTGDLVEDYESKLRLYQRFEKRRELYNLMKQSLNQPELLKQYITQLEELE
>NZ_HG813242.1|WP_001830080.1|895210_896437_+|signal-recognition-particle-docking-protein-FtsY
MSFFKRLKDKFSSKSEDDIQKDLDETVDSNANSDSDSMDPNDSDEQVKPKKKPKKLSEADFDEDGLISIEDFEEIEAQKIGAKFKAGLEKSRQNFQEQLNNLIARYRKVDEDFFEALEEMLITADVGFNTVMKLTDELRTEAQRRNIQETEDLREVIVEKIVEIYHQEDDHSEAMNIEDGRLNVILMVGVNGVGKTTTIGKLAYRYQQEGKKVMLAAGDTFRAGAIQQLNVWGERVGVEVVSQNEGSDPAAVVYDAINAAKNKGVDILICDTAGRLQNKSNLMQELDKMKRVINRAIPDAPHEALLCLDATTGQNALSQARSFKEVTNVSGIVLTKLDGTAKGGIVLAIRNELHIPVKYVGLGEKMDDLQPFNPESYVYGLFADMIEQNEDIPEEISRNSSVESEEGN
>NZ_HG813242.1|WP_001833035.1|891644_895214_+|chromosome-segregation-protein-SMC
MVYLKSIDAIGFKSFADHTNVQFDKGVTAIVGPNGSGKSNITDAIKWVLGEQSAKSLRGAKMEDIIFSGAEHRKAQNFAEVKLKLDNHSQKLQIDSEELVVTRRLYRSGESEYYLNNDRARLKDIIDLFLDSGLGKEAFSIISQGRVDEILNAKPINRRQIIEESAGVLKYKKRKAESIQKLDHTEDNLNRVEDILYDLEGRVEPLKEEAAIAKEYKQLSKEMEQSDVIVTVSDIDHYTEDNQRLDERLNHLKSQQAEKEGQQAQINQLLQKYKGKRQQNDYDIEKLNYELVKATENYEQLSGKLNVLEERKKNQSETNARYEEELDNLESQIDSIKNEKAQNEKLLAELKNKQKQLNKEVQELESLLYISDEQHDEKLEEIKNSYYTLMSEQSDVNNDIRFLEHTINENEAKKSRLDSRLVEAFNQLKDIQQNITQTQKEYQSSKKSMEKVEQNIQQLEQQLTDSKRLLSEYENKLYQAYRYNEKLKSRIDSLATQEEDYTYFFNGVKHILKAKDKELRGIHGAVAEVINVPSEMTQAIETALGASLQHVIVDNEKDGRQAIQYLKQRGLGRATFLPLNVIQPRHVAADIKDVARGSQGFINIASDAINVSAKYQNIIENLLGNTIIVENLKHANELARAIRYRTRIVTLEGDVVNPGGSMTGGGARKTKSILSQKDELSTMRNQLEDYQRQTAEFERQFKEQKTQAEQLSEQYFSASQQYNNLKEQVHHHELELDRLKTQEAHLKNEHEEFEFEKNDGYQSDKSKETLKEKQNHLIEIQQQLKQLESDIERYTQLSKEGKASTHQTQQQLHQKQSDLAVVKERIKSQKQVYERLDKQLSDSERQKIEVNEKIKLFNSDEMMGKDAFEKLKEQIQQQENVRQNLNQQLSEIKQQRKDLNEKIEINESQLQKCHQDILSIENHYQDIKAKQSKLDVLINHAIDHLNDTYQLTVERARMEYDSDETIDNLRKKVKLTKMSIDELGPVNLNAIEQFEELNERYTFLNEQRTDLREAKETLEQIIHEMDKEVEGRFKTTFHAVQDHFTTVFKQLFGGGQAELRLTEDDYLSAGVDIIVQPPGKKLQHLSLLSGGERALSAIALLFAILKVRSAPFVILDEVEAALDEANVIRYAQYLNELSTETQFIVITHRKGTMEFSDRLYGVTMQESGVSKLVSVNLNTIDEVMKEEQA
>NZ_HG813242.1|WP_001830158.1|890780_891518_+|ribonuclease-III
MANQKKKEMVHNFQQKFTDKMKSLGLHFKNIDLYQQAFSHSSFINDFNMNRLEHNERLEFLGDAVLELTVSRYLFDRHPHLPEGNLTKMRATIVCEPSLVIFANKIKLNELILLGKGEEKTGGRTRPSLISDAFEAFVGALYLDQGLDSVWTFAEKVIFPYVEDDELVGVVDFKTQFQEYVHSQNKGDVTYQLIKEEGPAHHRLFTSEVILENKAVAEGKGKTKKESEQKAAEQAYKLMKNKKSL
>NZ_HG813242.1|WP_001830184.1|890432_890666_+|acyl-carrier-protein
MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKYINSLEK
>NZ_HG813242.1|WP_001830161.1|889470_890205_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MNKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKDKAEAVVEEIKAKGVESFAIQANVAKGDEVKEMIKEVVSQFGSVDVLVNNAGITKDNLLMRMKEQEWDDVIDTNLKGVFNCIQKVTPQMLRQRSGAIINLTSIVGAMGNPGQANYVATKAGVIGLTKTAARELASRGITVNAVAPGFIVSDMTNALSDDLKDQMLEQIPLKRFGEDTDIANTVAFLASDKAKYITGQTIHVNGGMYM
>NZ_HG813242.1|WP_001830062.1|888551_889478_+|ACP-S-malonyltransferase
MGKIAVVFPGQGAQKVGMASDLYNEEERSTRVLNLAQETVDFDLLETMFTDNDGKLGETENTQPALLTHSVALLESLNHLKVDYTMGHSLGEYSSLVASGVLSFEDAVRIVRKRGQLMARAFPNGVGGMAAVLGLDYDDVDKICQTLSTKEQLIEPANINSPGQIVVSGHKSLIDELVKKGKELGAKRVLPLAVSGPFHSSMMKVIEEDFANFINQFEWHNANYPVVQNVNAKGETDAEVIKRNMVKQLYSPVQFIQSTKWLINQGVDHFIEIGPGKVLSGLIKKINRDVKITSIQTLEDVKGWNNHE
>NZ_HG813242.1|WP_001830112.1|887572_888550_+|phosphate-acyltransferase-PlsX
MVKIAVDMMGGDDAPGIVLDAVKKAVEDFKDLEIILFGDESQYNLSHERIEFRHCTEKIEMEDEPVRAIKRKKDSSMVKMAEAVKSGEADGCVSAGNTGALMSAGLFIVGRIKGVARPALVVTLPTTDGKGFVFLDVGANADAKAEHLLQYAQLGNIYAQKIRGIQNPSVSLLNIGTEAAKGNSLTKKAYDLFEKNQSFNFTGNIEAKTLMDGNVDVVVTDGYTGNMVLKNLEGTAKSIGKMLKETIMSSFKNKLAGAVLKKDLETFAKKMDYSEYGGSVLLGLDGTVVKAHGSSNAKAFYSAIKQAKIAGEENIVQIMKDTVGE
>NZ_HG813242.1|WP_001830099.1|887010_887571_+|transcription-factor-FapR
MKLKKNDRRVAIKEAIELNPFITDYELCEKFDVSIQTIRLDRTHLNIPELRKRIKLVAEQNYGRIKSIEANEIIGDLIQVNPDVSAQSLIEITIDSVFAKSEIARGHVLFAQANSLCVALIHKPIVLTHESQVEFKEKVKLNDTVRADARVIDITDKHYIIEVNSYVSDMLVFKGKFKMYYTSEDE
>NZ_HG813242.1|WP_002439483.1|898476_898752_+|30S-ribosomal-protein-S16
MAVKIRLTRLGSKRNPFYRIVVADARSPRDGRIIEQLGTYNPAHVNAPEVKIDEELALKWLHDGAKPTDTVHNILSREGILKKFDEQKNAK
>NZ_HG813242.1|WP_001832559.1|898878_899382_+|ribosome-maturation-factor-RimM
MEVEVGQIVNTHGIKGEVKVKSNSDFTETRFQPGEQLLVKHNNTEIVYTVASYRIHKGFHMLRFEGINNINEIEHLKGDYIYQERDHQDIELGEHEYYYSDIIGCTVFKDDDTPIGRVINIFETGANDVWVVKGEKEYLIPYIEDVVKDIDIETKTIKITPMEGLLD
>NZ_HG813242.1|WP_002494426.1|899381_900119_+|tRNA-(guanosine(37)-N1)-methyltransferase-TrmD
MKIDYLTLFPEMFEGVLNHSILKRAQDKGIINVNTINFRDYSINKHNQVDDYPFGGGQGMVLKPEPVFNAMEDINHNEHTRVILMCPQGRPFTQEIAQELSEAKHIVFICGHYEGYDERIRKHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNQASHQDDSFSEGLLEFPQYTRPREYKNMSVPEVLLSGNHAHIDQWRHEQKLIRTYEKRPDLLEQYPLTEKDREILETYKKKLKND
>NZ_HG813242.1|WP_002436293.1|900224_900575_+|50S-ribosomal-protein-L19
MSNHKLIEAVTKSQLRTDLPTFRSGDTLRVHVRIVEGSRERIQVFEGVVIKRRGGGISETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLRSLRGKAARIQEIR
>NZ_HG813242.1|WP_002494425.1|901104_903705_-|YfhO-family-protein
MIKNIWNKPIKRFTLIVLVSCILSFILYAPFLYQFITKGIVFSGSGDGFRQMMPFQMYLYEHFTSLKGFYDASFGLGGDYVKSLAYYYSLSPLMWINFSMIWILEQTINVNPHDISFWTINQLIMTYVRTVITFIFSFYLFSYLRLKPAPMFIATILYGMSTVVTYYNFTWSFYGNLLIMLPMSLWAIERFFKERKIGWFIFAIAYTLFSNFYFSYYEAIVIGFYFIYRFAIPHEKDIVNRWQKLYILVCATLLSVLVSIYGLYTGVSSFLDNDRTQNPNFKITFFTNLFETNYNIFADGFYITISFIAIIALFCFKLYQHYYYKLFAIATWILLIGSFSQWFDSAFNGFSLPQRRWVYFLALSTSVLIALFIQHLSEISIKEYTFVAIPVFIYGFIFIALSERSVKWMFVALILIIVLFIFIKYKSLLTRTSMMVLLVVLFLAQQVLMTNDSRKITIEPYQTTIKTINDSSYRSPVLNKKIKYMHQSSTDPLKRLDYFSYYALNSPLIYHYNGTSLYSSIFDGDILKYYDQTLQINMPVDKNSTYRYLNNRANLMSLWDVQDRLRHPDDLNMPYGFKKKELITDKKDQWIHSVNTINYPSAHITNKIYDARKLKSPLDREQAMLKGVVLNHKSQVNTDFKPNPNLLSNAKQNLNHANWIDSKHLKVKQHNGGVTLNLPRNVKNYKDMYIEMDVELLSPDKEHKVGVNEYSQERNRLSYKYRRFVSPVTMRAKASNQLNIKMSKGVYRFKVKGIYGENYQTLKKASQQLQPVKVKKERNGFTIIKKKKEHGYLVLPMVYAEGMHAMANGKPLKVQQGNGIMTTIPVKEGQTKIKLSYTPPYFYLLITVSCIGIILSILFTHYVKRK
>NZ_HG813242.1|WP_002468914.1|903697_906298_-|YfhO-family-protein
MRRKACFIILLITLSLIGHSYIIFRFHHDGVLSTGPNDGMEQMIPIQMYLYHQWTQGNLFYSTHLGLGGDFFTDLSYYFSTNLIFILNVPIIKLCEIFFSLNTNQILLWMYNALIVSIIKSTIALFCTYLFSYYISKNKIISLLISFIFVMSPLYFRFTIYWPFFSDTFIWLPLLLLGIERLLRDFKAGLFILTVSLILINNFYFAYYFLIIGIGYTLIRIIYRHPKDSLTRWQASLTIICSALLALGNSMFVFFHGVQSFLNNRRQSFTGQVNWIEHLNKDTNIFFDNYLIVVIFLSIQALLTIKLYKHFYYKLFALLLLATIIFAFLPFVDQLFNGFSAPQKRWHFILAFNSSILIGLFVKYFKTIRPKTYIYTNLIAQSVIYISSISYNTFLPWLSLVPVVSVIGLLILLIKEKKVRYYLTYLYSISIAALSLMITFVFIKNQIFFQDHINRANKRYINSSFYSSAIQRSLVKEMNQTKNDDQRINWRVDEQDNTPMYQNFKGLSIYSSIFHHNILDFYYDALKINLAEESVSRYQSTNARQNIESLFSVKYLMMKDYQNFIPSYFKKVKSRGQYIIYKNQLPLPSVKVTQNIYNHKSLKKPIDREHAMINGAIVTSKGTAYHSKVKNLLDQTRVSTQNITRYSNNELTVNKESGIIKLHLPKNIRDKYKDFYLTMNIKRGDPDSNYTVSINQYHNHRLYNDSIYRTGISKVLYRSLPDKNGDITIQLSPKGKFNLELLELNGENYDTLKQAHHHANFNMRYKDIKNGVKVNLDHHSKGLAVINIPYRKGMRAYVDDRQSNIKKVNYMMTGVPVNKNDKTITIQYRPPFLKTMFSISIFSIVVSIVFIRLKNIRKRKMRIRHD
>NZ_HG813242.1|WP_001829495.1|906626_907490_+|ribosome-biogenesis-GTPase-YlqF
MAIQWYPGHMAKAKRQVSEQLKKVDVVFELVDARIPYSSRNPMIDDVIKQKPRVVILNKKDMTNLKELEKWEIYFKNEGFYPVAVDAKHGKNLKNVEVEAIKATQEKFDREKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIAETGNKPGVTKQQQWIKVGKSLQLLDTPGILWPKFEDEEVGKKLSLTGAIKDSIVHLDEVAIYGLNFMIKHDVSALKRHYNIDTHEDAEILDWFDAIGRRRGLLQKGNEVDYESVIELIINDMRNAKIGTYCFDILKEMKSE
>NZ_HG813242.1|WP_001829514.1|907494_908265_+|ribonuclease-HII
MSLTIKEIKEKLSRIETLEELHKHEANNDSRKGVINAIKSREKNILKQQALEEHYLSMNQYENNIMSSNRDALICGIDEVGRGPLAGPVVACAVILEKNHHYIGLDDSKKVSPKNRARLNQNLKENVYQYAYGIASSVEIDELNIYRATQLAMLRAINQLDVTPTHLLIDAMTLDIDIPQTSIIKGDAKSVSIAAASIMAKEYRDQYMRQLSKQFPEYGFDKNAGYGTKQHLKAIDQVGIINEHRQSFEPIKSMMK
>NZ_HG813242.1|WP_002439496.1|908372_909539_+|ADP-forming-succinate--CoA-ligase-subunit-beta
MNIHEYQGKEIFRSMGVAVPEGRVAFTAEEAVEKAKELNSDVYVVKAQIHAGGRGKAGGVKIAKSLSEVETYANELLGKQLVTHQTGPEGKEVKRLYIEEGCDIQKEYYVGFVIDRATDKVTLMASEEGGTEIEEVAAQTPEKIFKETIDPVVGLSPYQARRIAFNINIPKESVGKATKFLLALYNVFIEKDCSIVEINPLVTTGDGQVLALDAKLNFDDNALFRHKDILELRDLEEEDPKEIEASKYDLSYIALDGDIGCMVNGAGLAMATMDTINHFGGNPANFLDVGGGATKEKVTEAFKIILGDDNVKGIFVNIFGGIMKCDVIAEGIVAAVKEVELTLPLVVRLEGTNVERGKAILNESGLAIEPAATMAEGAQKIVKLVKEA
>NZ_HG813242.1|WP_002446283.1|909560_910469_+|succinate--CoA-ligase-subunit-alpha
MSVFIDKNTKVMVQGITGSTALFHTKQMLDYGTQIVAGVTPGKGGQVVEGVPVYNTVEEAKNETGANVSVVYVPAPFAADSIIEAADADLDMVICITEHIPVVDMVKVKRYLQGRKTRLVGPNCPGVITADECKIGIMPGYIHKKGHVGVVSRSGTLTYEAVHQLTEEGIGQTTAVGIGGDPVNGTNFIDVLKAFNEDSETKAVVMIGEIGGTAEEEAAQWIKENMNKPVVGFIGGQTAPPGKRMGHAGAIISGGKGTASEKIKTLNDCGVETADTPSEIGTTLIDAAKKAGIYEELLTIKK

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Crispr_ID: NZ_HG813242_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_HG813242_4

2002721-2002803

Orphan

Consensus_repeat	Method
ATCATAGATAGTTTTGCTTCTGTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_HG813242_4

>merge|NZ_HG813242|4|2002721-2002803|CRISPRCasFinder
ATCATAGATAGTTTTGCTTCTGTTTACATTTTTCAAAAATGCATAAGAGCCACTAACAATCATAGATTGTTTTGCTTCTGTTT

>NZ_HG813242|4|4|2002721-2002803|CRISPRCasFinder
ATCATAGATAGTTTTGCTTCTGTTT	ACATTTTTCAAAAATGCATAAGAGCCACTAACA
ATCATAGATTGTTTTGCTTCTGTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_HG813242.1\|WP_001831504.1\|1992193_1992610_-\|DUF2871-domain-containing-protein	unknown	unknown	gnl\|CDD\|378551
NZ_HG813242.1\|WP_001831482.1\|2004327_2004693_-\|DUF3139-domain-containing-protein	unknown	unknown	gnl\|CDD\|371476
NZ_HG813242.1\|WP_002456063.1\|1996319_1997765_-\|PTS-sucrose-transporter-subunit-IIBC	unknown	unknown	gnl\|CDD\|131051
NZ_HG813242.1\|WP_001831516.1\|1997918_1998296_+\|YbgA-family-protein	unknown	unknown	gnl\|CDD\|377982
NZ_HG813242.1\|WP_002456059.1\|2008865_2009900_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_HG813242.1\|WP_107511365.1\|1992823_1993123_-\|transporter	unknown	unknown	gnl\|CDD\|260082
NZ_HG813242.1\|WP_002438333.1\|2004816_2005446_-\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380314
NZ_HG813242.1\|WP_002438338.1\|2002249_2002600_+\|DUF4889-domain-containing-protein	unknown	unknown	gnl\|CDD\|374445
NZ_HG813242.1\|WP_010959272.1\|2011051_2011642_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	unknown	unknown	gnl\|CDD\|225091
NZ_HG813242.1\|WP_002456062.1\|2001636_2002059_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	unknown	unknown	gnl\|CDD\|226389
NZ_HG813242.1\|WP_001831592.1\|2009909_2010362_-\|GAF-domain-containing-protein	unknown	unknown	gnl\|CDD\|379056
NZ_HG813242.1\|WP_002470210.1\|2006760_2007924_-\|NarK/NasA-family-nitrate-transporter	unknown	unknown	gnl\|CDD\|225133
NZ_HG813242.1\|WP_002438321.1\|2010381_2011059_-\|respiratory-nitrate-reductase-subunit-gamma	unknown	unknown	gnl\|CDD\|376889
NZ_HG813242.1\|WP_002438357.1\|1990674_1991667_+\|acryloyl-CoA-reductase	unknown	unknown	gnl\|CDD\|176249
NZ_HG813242.1\|WP_002456060.1\|2002882_2004163_-\|cation:dicarboxylase-symporter-family-transporter	unknown	unknown	gnl\|CDD\|183075
NZ_HG813242.1\|WP_002438349.1\|1995282_1996230_+\|magnesium-transporter-CorA-family-protein	unknown	unknown	gnl\|CDD\|213361
NZ_HG813242.1\|WP_002438330.1\|2005609_2006056_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_HG813242.1\|WP_002474432.1\|1991723_1992125_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_HG813242.1\|WP_002438342.1\|1999458_2001564_+\|AraC-family-transcriptional-regulator-Rsp	unknown	unknown	gnl\|CDD\|197666
NZ_HG813242.1\|WP_038399540.1\|2008180_2008837_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107

Protein	Function_ID	Function_description	E-value
NZ_HG813242.1\|WP_001831504.1\|1992193_1992610_-\|DUF2871-domain-containing-protein	gnl\|CDD\|378551	pfam11070, DUF2871, Protein of unknown function (DUF2871). This family of proteins has no known function.	1.93795e-46
NZ_HG813242.1\|WP_001831482.1\|2004327_2004693_-\|DUF3139-domain-containing-protein	gnl\|CDD\|371476	pfam11337, DUF3139, Protein of unknown function (DUF3139). This family of proteins with unknown function appears to be restricted to Firmicutes.	9.91056e-13
NZ_HG813242.1\|WP_002456063.1\|1996319_1997765_-\|PTS-sucrose-transporter-subunit-IIBC	gnl\|CDD\|131051	TIGR01996, Includes:_Phosphotransferase_enzyme_IIB_component, PTS system, sucrose-specific IIBC component. This model represents the fused enzyme II B and C components of the sucrose-specific PTS sugar transporter system. Sucrose is converted to sucrose-6-phosphate in the process of translocation into the cell. Some of these transporters lack their own IIA domains and instead use the glucose IIA protein (IIAglc or Crr). The exceptions to this rule are Staphylococci, Streptococci, Lactococci, Lactobacilli, etc. which contain their own A domain as a C-terminal fusion. This family is closely related to the trehalose transporting PTS IIBC enzymes and the B and C domains of each are described by subfamily-domain level TIGRFAMs models (TIGR00826 and TIGR00852, respectively).	0
NZ_HG813242.1\|WP_001831516.1\|1997918_1998296_+\|YbgA-family-protein	gnl\|CDD\|377982	pfam08349, DUF1722, Protein of unknown function (DUF1722). This domain of unknown function is found in bacteria and archaea and is homologous to the hypothetical protein ybgA from E. coli.	1.02229e-28
NZ_HG813242.1\|WP_002456059.1\|2008865_2009900_-\|sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	2.43496e-57
NZ_HG813242.1\|WP_107511365.1\|1992823_1993123_-\|transporter	gnl\|CDD\|260082	cd08545, YcnI_like, Reeler-like domain of YcnI and similar proteins. YcnI is a copper-responsive gene of Bacillus subtilis. It is homologous to an uncharacterized protein from Nocardia farcinica, which shares a conserved three-dimensional structure with cohesins and the reeler domain. Some members in this YcnI_like family have C-terminal domains (DUF461) that may bind copper.	3.8519e-12
NZ_HG813242.1\|WP_002438333.1\|2004816_2005446_-\|nitroreductase-family-protein	gnl\|CDD\|380314	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN. A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	1.05694e-58
NZ_HG813242.1\|WP_002438338.1\|2002249_2002600_+\|DUF4889-domain-containing-protein	gnl\|CDD\|374445	pfam16230, DUF4889, Domain of unknown function (DUF4889). This family consists of uncharacterized proteins around 110 residues in length and is mainly found in various Staphylococcus aureus species. The function of this family is unknown.	6.96685e-27
NZ_HG813242.1\|WP_010959272.1\|2011051_2011642_-\|nitrate-reductase-molybdenum-cofactor-assembly-chaperone	gnl\|CDD\|225091	COG2180, NarJ, Nitrate reductase delta subunit [Energy production and conversion].	4.33596e-51
NZ_HG813242.1\|WP_002456062.1\|2001636_2002059_+\|pyridoxamine-5'-phosphate-oxidase-family-protein	gnl\|CDD\|226389	COG3871, COG3871, Uncharacterized stress protein (general stress protein 26) [General function prediction only].	6.16351e-40
NZ_HG813242.1\|WP_001831592.1\|2009909_2010362_-\|GAF-domain-containing-protein	gnl\|CDD\|379056	pfam13185, GAF_2, GAF domain.	2.00355e-05
NZ_HG813242.1\|WP_002470210.1\|2006760_2007924_-\|NarK/NasA-family-nitrate-transporter	gnl\|CDD\|225133	COG2223, NarK, Nitrate/nitrite transporter [Inorganic ion transport and metabolism].	5.70985e-110
NZ_HG813242.1\|WP_002438321.1\|2010381_2011059_-\|respiratory-nitrate-reductase-subunit-gamma	gnl\|CDD\|376889	pfam02665, Nitrate_red_gam, Nitrate reductase gamma subunit. This family is the gamma subunit of the nitrate reductase enzyme, the gamma subunit is a b-type cytochrome that receives electrons from the quinone pool. It then transfers these via the iron-sulfur clusters of the beta subunit to the molybdenum cofactor found in the alpha subunit. The nitrate reductase enzyme, EC:1.7.99.4 catalyzes the conversion of nitrite to nitrate via the reduction of an acceptor. The nitrate reductase enzyme is composed of three subunits. Nitrate is the most widely used alternative electron acceptor after oxygen.	7.03174e-110
NZ_HG813242.1\|WP_002438357.1\|1990674_1991667_+\|acryloyl-CoA-reductase	gnl\|CDD\|176249	cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction.	0
NZ_HG813242.1\|WP_002456060.1\|2002882_2004163_-\|cation:dicarboxylase-symporter-family-transporter	gnl\|CDD\|183075	PRK11283, gltP, glutamate/aspartate:proton symporter; Provisional.	3.75555e-163
NZ_HG813242.1\|WP_002438349.1\|1995282_1996230_+\|magnesium-transporter-CorA-family-protein	gnl\|CDD\|213361	cd12827, EcCorA_ZntB-like_u2, uncharacterized bacterial subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB family. A uncharacterized subfamily of the Escherichia coli CorA-Salmonella typhimurium ZntB (EcCorA-ZntB_like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes.The EcCorA-ZntB-like family includes the Mg2+ transporters Escherichia coli and Salmonella typhimurium CorAs, which can also transport Co2+, and Ni2+. Structures of the intracellular domain of EcCorA-ZntB-like family members, Vibrio parahaemolyticus and Salmonella typhimurium ZntB, form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA. Natural variants such as GVN and GIN, such as occur in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport.	1.20836e-108
NZ_HG813242.1\|WP_002438330.1\|2005609_2006056_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.29821e-18
NZ_HG813242.1\|WP_002474432.1\|1991723_1992125_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	7.22346e-08
NZ_HG813242.1\|WP_002438342.1\|1999458_2001564_+\|AraC-family-transcriptional-regulator-Rsp	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.26611e-18
NZ_HG813242.1\|WP_038399540.1\|2008180_2008837_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	9.3634e-76

>NZ_HG813242.1|WP_002438338.1|2002249_2002600_+|DUF4889-domain-containing-protein
MKNKKGLGIGLITIMIIVCIVLVIMMFVGGKKESYYGIMKDSTTIDKMINTKNEKIEKNVELPKDANVSVKKEDFVMLFKDEKTGKITKVKKVNHDDVPHGLMSKIHDMGNMKHGM
>NZ_HG813242.1|WP_002456062.1|2001636_2002059_+|pyridoxamine-5'-phosphate-oxidase-family-protein
MNKQQVTKAIEKVLNSSKIGVLSTAHHNKPNSRYMVFYNDDLNLYTKTNINSLKVEEIENNPDAHILLGYNETTNNSFVEIDATIEVVKNQKVIDWLWETQDKTFFNSKEDPELCVLKVIPRSIKLMNDDELDTPATIEL
>NZ_HG813242.1|WP_002438342.1|1999458_2001564_+|AraC-family-transcriptional-regulator-Rsp
MTCFLNIYKEYHSPPERNINRIILMFSLTNDLKITINGETKDLGNHIAIINQSDIYFINSASNLVLLSIPVIYFYSKDNKFFKCYFDRHLLQSSSFVKTIILQAIQHLIKGENQDEQSISKIIQTLLKEAVIRYKKKYIPQIAVNHSVFTEGLTFIHSKVSQSLSLREVAQHCNISESYCSNLFARYLNMNFKDYFTSLKVIDSIKRLLSSEDSINAISEQSGFSSHTNFTNQFKNYLGCSPKQYRTIISKLDSLPSISFSDTDFSQYIDLINQFEFSDHLATETTERDINEFYPQDQTKNSKAFIRFQNFNELFQFVFNEYYNIDFTSLPQAVIFINDITDISTREVNFNLLNRCFEKLFEKNIGLAMRLTSTNEFESIKEIILLFLNSHQDYKMNKKMVKFMLVFETKNMSVNDIHLCHLKIKNKNKAIRYSITVEGLLHQNSSIDRTYDMMKRLNFDYYFIDIENLETKNSLITKRKSYLHSSTHFENYKQFILDSGIPSTKFVYNNLSLKCFKYTNNGTYPLQLSDLVCHLVALMRYGGGVSYQLIEDESPFIALFNRYGSPLPLMHLYKLIEPFLNEPLEIANNFLMSRKDGNYHFLLFNKINDRYLSDSQQRYVFKNTLSTNSLIIIKTLNHEHGAIQNLLPQTKQQFYIERSILDELDKSNQPKTELAIQHDHHLPFQVTLKHDEVKYICFKPS
>NZ_HG813242.1|WP_001831516.1|1997918_1998296_+|YbgA-family-protein
MKERGKIEKLWREEKYRVLFHDQNAYHSIRTLLKSPTTLGEVKEHITHALTITPTKGSVINAFEHMWGYFKKQCTQYEKQHSRELKALYIENQIDYFELLSFLKNLADKYAVEYLQQSTILNITK
>NZ_HG813242.1|WP_002456063.1|1996319_1997765_-|PTS-sucrose-transporter-subunit-IIBC
MSYKKSAEEILKAIGGEENLDAMAHCATRLRLVLNDESKVDEDTLSNMDVVKGTFSTGGQYQIIIGSGTVNKVFNELEKITGKEASTTSEVKDKSSKHMNPFQKFVKMLSDIFVPIIPAIVAGGLLMGLNNIFTAKDLFYDGKSIIDVHSQFSGLADMINIFANAPFTLLPILIGFSAAKRFGGNPYLGAALGMILVHPGLMSAYDFPKALEEGKAIPHWDVFGLHINEVGYQGQVLPMLVATYILATIEKWLRKVIPTVLDNLLTPLLSIFITAFITFLFVGPVTRQLGYWLSDGLTWLYEFGGAIGGLIFGLLYAPIVITGMHHSFIAVETTLIADATKTGGSFIFPIATMSNIAQGGAALAAFFIIKQNKKLKGVASAAGISALLGITEPAMFGVNLKLRYPFIGAVAGSGIGAAYISFFKVKAIALGTAGLPGFISINPTHAGWLHYLIGMLIAFVVSVVVTLVLSRRKTNKTAVES
>NZ_HG813242.1|WP_002438349.1|1995282_1996230_+|magnesium-transporter-CorA-family-protein
MITAYKHALHHPSQIIETEINHSASWINVVEPDREEIEGLMEFYNIPEDFIRDPLDSEESARIEYDEDTGYSLIIIDLPIVNSTNRRVLSFVTIPLGIIIGNGIVMTVCDAENEFLENFAKQEDINLKFHSRFALEILTTIANHYNRNLRLLNKSRIRIERELKNNITNKQLFKLMEVEKSLVYFLAALKGNDTIIKKLFRLPAIKRFEEDEELLEDLVIENNQAIETTELHQRILESITSSYASLLSNDMNNIMKTLTLFTVLLTLPTLVFSFFGMNVPLPIDDHSYVSWIIVVGISLILVAIVSIFLWKKQKL
>NZ_HG813242.1|WP_107511365.1|1992823_1993123_-|transporter
MGPHEFIEFPIVVANPKKEGTFKWNTTQTYDNGDVVKWTGKEDSAHPAPTTTVKKGANPNDTHSDSSQGDSIALWIVAIVAIVISLIALFKQAHPKKFN
>NZ_HG813242.1|WP_001831504.1|1992193_1992610_-|DUF2871-domain-containing-protein
MRRLLYSFLFYMVIGLLSGFYYRELTKAHDFVGDTQLSLVHTHTLILGMFMFLLLLPLEKVFKLSSYYLFNWFFFVYHLGVLITISMMTVKGTFQVIGKKFSPEMFAGFAGIGHTGMLAGLLLLFFLLRQAILTEPKK
>NZ_HG813242.1|WP_002474432.1|1991723_1992125_-|GNAT-family-N-acetyltransferase
MTKIHFEAPSPEDYCNLRANAGMSSKSIEAAIKGLPHACFNVTLYENDMLIGMGRVIGDGGTVFQIVDIAVKDIYQGLGHGMTIMHEIMKYIESVAEEGTYVSLIADYPADQLYEKFGFKSTEPYSKGMYIKY
>NZ_HG813242.1|WP_002438357.1|1990674_1991667_+|acryloyl-CoA-reductase
MVEKFKAFVVDQDDNGIVSNSYKELTKDDLPEGDVLIKVHYSGINYKDALATQDHNKIVKQYPMVPGIDLAGTIEETNAPGFEVGDKVIVTSYDLGVSHYGGFSEYARVKSEWVIELPEDLTLEEAMIYGTAGYTAGLAIEQLEKSGMSIEGKEVLVRGATGGVGTISLLMLNNLGYDVIASTGRDDAEEKLKKLGAKEVIGRLPEDNSKPLEKRTWQAAIDPVGGENLPYIVKRLDNNGSVALIGMTGGNNFETTVFPFILRGASIIGIDSVFTPIKLRKRVWRRLAKDLKPQQLHDIKHVISFDEIPKAIDQVINHNNTGRIVIDFNV
>NZ_HG813242.1|WP_002456060.1|2002882_2004163_-|cation:dicarboxylase-symporter-family-transporter
MALFKKKISLPTQVIIALVLGVIAGLLLYGQDDVANYIKPFGDVFLNLIKMIIIPIVFCSLALSISNLGDSKKVGSYGWKAILYFEIITTIAIGLGLIIGNLFKPGSGLDPDKLPKGDITKYQSSAHSAEQATTYGNHLIDTLVHIVPTNLFESMAKGELLPIIFFAVFFGLGLAAIGEKAEPVKGFLNGTLEAVFWMINKILKLAPIGVFAFICTTVMTFGASALIPLFKLLVVVVFAMVFFVIVVLGIVARMVGISIFSIMKILKSELLLAFSTSSSEAVLPIMMKKMERFGSPKDVTSFVIPIGYSFNLDGSALYQSIAALFVAQMYDIHLSLTEQLVLMATLMIASKGMAGVPGVSIVVLLTTLTSMNITAQGLALIIGIDRLLDMVRTCVNVIGNALSTVVIAKWENVYDKEKGQNYLNSI
>NZ_HG813242.1|WP_001831482.1|2004327_2004693_-|DUF3139-domain-containing-protein
MSKKQVIFRVIIILIISLILAIAFFFGLKAYQGHKNLELIDSYMSDHHLNDKVKKDKTSYSTKKGLYYKEVVFKDEPNVTYVIQPISTSKGIFIEGFDSETKKSIKKAKHSDFDQKYKPSK
>NZ_HG813242.1|WP_002438333.1|2004816_2005446_-|nitroreductase-family-protein
MTRINDFNEVLNSRKSVKVFDENYKIPREEMDEIITKATKAPSSVNMQPWRIAVVESDEMKEKVKESFGFNSRQLTTSSAMLIIFGDLQNYEKAEQIYGDAVEQQLMTEDIKAQLLDWILPYYKNLSREGMKDIVNIDSSLMAMQLMLTAKAHGYDTNPIGGFDKENIADIIGYDSDRYLPVLAIAIGKKAQDAHDSVRLRIDDVREFL
>NZ_HG813242.1|WP_002438330.1|2005609_2006056_+|MarR-family-transcriptional-regulator
MYVENSYLSKQLCFLFYVSSKEIIKKYTDYLKEYGLTYTGYIVLMAIEDDEKLNIKKLGERVFLDSGTLTPLLKKLEKKNYVIRTREEQDERNLQISLTERGKDIQNVLSDISQSVFNEFNITQEETQNLVEDLQNFVTKNFDKTVEK
>NZ_HG813242.1|WP_002470210.1|2006760_2007924_-|NarK/NasA-family-nitrate-transporter
MNMKKGVSQLTLQTLSLVAGFMAWSIISPLMPFISQDVDISPGQISVILAIPVILGSVLRVPFGYLTNIVGAKWVFFWSFIVLLLPIFLLGQAQSPGMLMLSGFFLGIGGAIFSVGVTSVPKYFSKDKVGLANGIYGVGNIGTAVSSFCAPVLAGAIGWQNTVRSYLIILSIFAILMFFLGDKNEPKVKIPLMAQVKDLSKNYKLYYLSLWYFITFGAFVAFGIFLPNFLVDHFSIDKVDAGIRSGIFIALATFLRPVGGVIGDKFNAVQALIIDFVIMIIGALILSLSSHIVLFTIGCLAISICAGIGNGLIFKLVPSYFSKEAGSANGIVSMMGGLGGFFPPLVITFVTSITGSSHLAFFFLAIFGVIALITMIHLNKKEKAIRI
>NZ_HG813242.1|WP_038399540.1|2008180_2008837_-|response-regulator-transcription-factor
MKIVIADDHAVVRTGFSMILNYQEDMEVVATAADGVEAYQKVLEHRPDVLILDLSMPPGESGLIATSKISESFPDTKILILTMFDDEEYLFHVLKSGAKGYILKNSPDEQLILAVHTVYQGETYVDMKLTTSLVNEFVNQSQTDEVSSSSDPFKILSKRELEILPLIAKGYGNKDIAEKLFVSVKTVEAHKTHIMTKLNLKSKPELVEYALKKKLLEF
>NZ_HG813242.1|WP_002456059.1|2008865_2009900_-|sensor-histidine-kinase
MLEQTDLSLEQLLKNYYETTNEKIVFVNRQGKIIAMNDAAKDILTEEDNYNAMTNAICHRCEGYSNEYDVQSCKDCFLETTQLQHSNFQVFMKTKDNEIKPFTAMYQNIDEQRGISAFTLQNVAPQIERQEKMYQQKMLHRSIQAQENERKRISRELHDSVIQDMLNIDVELRLLKYKHRDKVLAETSQRIEGLLSQLIDDIRNMSVELRPSSLDDLGIEAAFKSYFKQFEENYGMHIKYDSNIKGMRFDNEIETVVYRVVQEGVFNALKYAEVNEIEVSTHSDGKQLVAEVVDRGKGFSLDHHPKGSGLGLYGMRERAELVNGHVNIETHINRGTIITLDIPI
>NZ_HG813242.1|WP_001831592.1|2009909_2010362_-|GAF-domain-containing-protein
MEPESLKHNQHLQMNLDKLRAQEGYDFGGIALYDYHHTSSPIKWQYVSGNTNDRYKLIILRKGRGLAGMVMKTGKRMVIADVDTALSPEEKVKFPIILSESLTAVVAVPLWLENSMYGVLLLGQRNHQPLPQSLDQLNIEKQIGIFTEIN
>NZ_HG813242.1|WP_002438321.1|2010381_2011059_-|respiratory-nitrate-reductase-subunit-gamma
MLNQFVWVIYPYLCLAIFVIGHIARYKYDQFSWTAKSSEMIEKKRLKWGSLLFHLGIIPVFFGHVVGLLIPANWLEAIGVNNHIYHIGAVYIGSVFGIITLIGMLLLTLRRLSIKNVRRLSSFSDIFVNIVLLIILIMGCYSTLVTNAIQPEFDYRQTIAIWFRHLFMFSPNADLMLNVPWSFKLHILLGFTVFACWPFTRLVHVWSVPLSYMNRRYIVYRKNKI
>NZ_HG813242.1|WP_010959272.1|2011051_2011642_-|nitrate-reductase-molybdenum-cofactor-assembly-chaperone
MEGSSVINLEQLSLYQDSLGYLGQQMNFPEKMTFHPKIFEETISKSHPGYEDLLAYREVMMNYTLSEIKAIYTDTFDFSKKHPLYMTFNKFDTQKERGQMLAKLKVLYEMFGLKMVDNELSDFLPLMLQFLQVADFKNDSRAQENLQLVIMIIEDGTYEMANTLAENNNPYAYVVSALRKTLKACIVPLKEVENHA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_HG813242_1	1.1\|531318\|30\|NZ_HG813242\|CRISPRCasFinder	531318-531347	30	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1051845-1051874	6	0.8

1. spacer 1.1|531318|30|NZ_HG813242|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.8

aaaaagaggaacgcctgagcaaagctcaag	CRISPR spacer
aacaacaggaacgcctgagcaaaaagcaaa	Protospacer
** ** *****************.  ***.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

32749 : 80860

Streptococcus_phage(30.0%)

transposase,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000694291.1\|32749_33583_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_000998885.1\|34268_35042_+	hypothetical protein	NA	NA	NA	NA
WP_000432280.1\|35279_35639_-	DUF4870 domain-containing protein	NA	NA	NA	NA
WP_002499602.1\|35803_36874_-	nitronate monooxygenase	NA	NA	NA	NA
WP_001052247.1\|36886_37753_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_000716034.1\|37739_38930_-	YbfB/YjiJ family MFS transporter	NA	NA	NA	NA
WP_000671997.1\|39874_40303_-	VOC family protein	NA	NA	NA	NA
WP_038399394.1\|40383_41313_+	HTH domain-containing protein	NA	NA	NA	NA
WP_038399395.1\|41474_43484_+	hypothetical protein	NA	NA	NA	NA
WP_002494449.1\|43739_45419_+\|transposase	IS1182-like element ISSep1 family transposase	A0ZS58	Staphylococcus_virus	1.1e-243	77.6
WP_135558899.1\|45515_46694_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.7e-61	37.2
WP_002437509.1\|47127_48237_+	hypothetical protein	NA	NA	NA	NA
WP_002437511.1\|48229_48601_+	hypothetical protein	NA	NA	NA	NA
WP_002504708.1\|48597_50241_+	hypothetical protein	NA	NA	NA	NA
WP_002504707.1\|50465_52142_+	recombinase family protein	A0A0S2SXR4	Bacillus_phage	7.3e-46	29.6
WP_000171557.1\|52247_52586_+	hypothetical protein	NA	NA	NA	NA
WP_001083108.1\|52681_52993_+	hypothetical protein	NA	NA	NA	NA
WP_000849085.1\|53008_53515_+	DUF1643 domain-containing protein	NA	NA	NA	NA
WP_002504705.1\|53535_53982_+	RadC family protein	NA	NA	NA	NA
WP_038399397.1\|54349_55024_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	9.2e-125	97.3
WP_038399399.1\|55330_55891_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA
WP_038399400.1\|56199_56541_-	hypothetical protein	NA	NA	NA	NA
WP_038399401.1\|57452_58127_-\|transposase	IS6 family transposase	A0A0N9RU54	Staphylococcus_phage	2.9e-126	98.2
WP_038399402.1\|58164_58437_-	hypothetical protein	NA	NA	NA	NA
WP_038399403.1\|58714_59260_-	hypothetical protein	NA	NA	NA	NA
WP_038399404.1\|59806_60154_-	helix-turn-helix transcriptional regulator	E4ZFI8	Streptococcus_phage	4.9e-13	35.8
WP_038399405.1\|60172_60790_-	CadD family cadmium resistance transporter	NA	NA	NA	NA
WP_000475805.1\|61118_61550_-	universal stress protein	NA	NA	NA	NA
WP_002485360.1\|62446_62710_-	replication initiation protein	NA	NA	NA	NA
WP_002498809.1\|64326_64539_-	DUF1958 domain-containing protein	NA	NA	NA	NA
WP_000669688.1\|65184_65352_+	hypothetical protein	NA	NA	NA	NA
WP_038399406.1\|65571_66363_+	HNH endonuclease	NA	NA	NA	NA
WP_002467663.1\|66349_66550_+	hypothetical protein	NA	NA	NA	NA
WP_002467629.1\|66773_66932_-	hypothetical protein	NA	NA	NA	NA
WP_038399407.1\|66954_67560_-	ATP-binding cassette domain-containing protein	F2Y1V6	Organic_Lake_phycodnavirus	6.6e-13	29.4
WP_002494531.1\|67565_68513_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_002467670.1\|68505_69336_-	hypothetical protein	NA	NA	NA	NA
WP_002494532.1\|69319_70360_-	SPASM domain-containing protein	NA	NA	NA	NA
WP_038399408.1\|70356_71568_-	radical SAM protein	NA	NA	NA	NA
WP_002469405.1\|71739_72645_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	4.7e-23	34.4
WP_038399409.1\|72619_73741_+	ABC transporter permease	NA	NA	NA	NA
WP_002498806.1\|73706_74318_+	hypothetical protein	NA	NA	NA	NA
WP_002455935.1\|74398_75064_+	response regulator transcription factor	W8CYM9	Bacillus_phage	4.8e-25	34.9
WP_038399410.1\|75051_76143_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_002469141.1\|77000_78362_+	SLC45 family MFS transporter	NA	NA	NA	NA
WP_002488995.1\|78902_79388_+	hypothetical protein	NA	NA	NA	NA
WP_104992782.1\|79681_80860_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	9.7e-61	37.2

DBSCAN-SWA_2

414321 : 424197

Hokovirus(12.5%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025987135.1\|414321_415374_-	HAMP domain-containing histidine kinase	A0A1V0SGX0	Hokovirus	2.0e-17	30.6
WP_001830352.1\|415376_416066_-	response regulator transcription factor	W8CYM9	Bacillus_phage	3.4e-34	35.2
WP_001830332.1\|416040_416514_-	DoxX family protein	NA	NA	NA	NA
WP_001830329.1\|416564_417002_-	DM13 domain-containing protein	NA	NA	NA	NA
WP_104992782.1\|417748_418927_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	9.7e-61	37.2
WP_002485887.1\|419156_419312_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	4.4e-14	77.6
WP_001830331.1\|419661_420261_-	hypothetical protein	NA	NA	NA	NA
WP_001830330.1\|420362_421076_-	7-carboxy-7-deazaguanine synthase QueE	A0A1U9WRB6	Streptococcus_virus	1.6e-55	44.8
WP_001830341.1\|421076_421496_-	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA
WP_002494318.1\|421500_422172_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.3e-59	52.4
WP_001830349.1\|422468_423056_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	4.4e-38	42.9
WP_001830323.1\|423045_424197_+	anthranilate synthase component I family protein	A0A0B5J984	Pandoravirus	7.5e-26	39.6

DBSCAN-SWA_3

445620 : 456054

uncultured_Caudovirales_phage(62.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002438897.1\|445620_447126_-	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	5.5e-61	34.0
WP_001832596.1\|447409_447910_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	1.1e-50	70.1
WP_001829684.1\|447923_448799_-	DMT family transporter	NA	NA	NA	NA
WP_001829589.1\|449553_449952_+	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	A0A2H4J545	uncultured_Caudovirales_phage	2.0e-71	100.0
WP_001829582.1\|449914_452020_+	class 1b ribonucleoside-diphosphate reductase subunit alpha	A0A2H4J2N6	uncultured_Caudovirales_phage	0.0e+00	100.0
WP_001829597.1\|452138_453107_+	class 1b ribonucleoside-diphosphate reductase subunit beta	A0A2H4J4P3	uncultured_Caudovirales_phage	3.9e-185	100.0
WP_002438902.1\|453359_454334_+	ABC transporter permease	A0A2H4IY97	uncultured_Caudovirales_phage	5.9e-165	99.7
WP_002495257.1\|454360_455278_+	iron chelate uptake ABC transporter family permease subunit	A0A2H4J116	uncultured_Caudovirales_phage	2.1e-10	100.0
WP_001829596.1\|455274_456054_+	ATP-binding cassette domain-containing protein	W6JKT0	Anomala_cuprea_entomopoxvirus	5.1e-18	33.6

DBSCAN-SWA_4

539205 : 601755

uncultured_Caudovirales_phage(80.6%)

integrase,head,terminase,plate,portal,holin,transposase,tail,capsid,protease

attL 533098:533118|attR 596235:596255

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
533098:533118	attL	NA	NA	NA	NA
WP_002438997.1\|539205_540447_+	cysteine desulfurase	Q2XUY6	environmental_halophage	4.1e-110	44.0
WP_001831954.1\|540436_540901_+	SUF system NifU family Fe-S cluster assembly protein	NA	NA	NA	NA
WP_002468153.1\|541106_542504_+	Fe-S cluster assembly protein SufB	NA	NA	NA	NA
WP_002468148.1\|542571_543621_-\|integrase	site-specific integrase	A0A2H4JBZ8	uncultured_Caudovirales_phage	5.5e-201	99.7
WP_038399439.1\|543835_544993_-	CapA family protein	A0A2H4JC87	uncultured_Caudovirales_phage	1.4e-218	98.2
WP_171049624.1\|544996_545164_-	hypothetical protein	A0A2H4JA13	uncultured_Caudovirales_phage	3.9e-24	98.2
WP_038399440.1\|545207_545819_-	helix-turn-helix domain-containing protein	A0A2H4JCV3	uncultured_Caudovirales_phage	6.4e-109	99.0
WP_038399441.1\|545990_546203_+	hypothetical protein	A0A1Q1PVU3	Staphylococcus_phage	3.9e-29	95.7
WP_171049625.1\|546245_546386_+	hypothetical protein	A0A2H4JB78	uncultured_Caudovirales_phage	8.5e-17	97.8
WP_038399442.1\|546378_546597_-	hypothetical protein	A0A2H4JDC2	uncultured_Caudovirales_phage	6.6e-32	94.6
WP_038399443.1\|546645_547527_+	DUF3102 domain-containing protein	A0A2H4J4L1	uncultured_Caudovirales_phage	3.7e-73	68.7
WP_172643074.1\|547537_547714_+	hypothetical protein	A0A2H4JDI7	uncultured_Caudovirales_phage	1.6e-12	97.3
WP_038399444.1\|547814_548303_+	ORF6C domain-containing protein	A0A2H4J854	uncultured_Caudovirales_phage	5.6e-71	92.6
WP_002468183.1\|548411_548615_-	hypothetical protein	A0A2H4J4K0	uncultured_Caudovirales_phage	4.8e-29	100.0
WP_002468180.1\|548723_548939_+	hypothetical protein	A0A2H4J149	uncultured_Caudovirales_phage	1.5e-28	95.8
WP_002498317.1\|548935_549118_+	hypothetical protein	A0A2H4JC97	uncultured_Caudovirales_phage	1.2e-23	96.7
WP_002468154.1\|549183_549447_+	hypothetical protein	A0A2H4JA24	uncultured_Caudovirales_phage	1.1e-33	97.1
WP_002468176.1\|549430_549916_+	siphovirus Gp157 family protein	A0A2H4JCW3	uncultured_Caudovirales_phage	8.8e-77	95.7
WP_002468156.1\|549916_550693_+	ATP-binding protein	Q8SDW5	Staphylococcus_phage	6.7e-127	88.0
WP_038399445.1\|550721_551276_+	single-stranded DNA-binding protein	A0A0H3U303	Staphylococcus_phage	2.6e-88	85.3
WP_002468164.1\|551974_552457_-	hypothetical protein	A0A2H4JC39	uncultured_Caudovirales_phage	2.5e-84	100.0
WP_002468137.1\|552500_553274_+	conserved phage C-terminal domain-containing protein	A0A2H4JEZ8	uncultured_Caudovirales_phage	4.7e-141	100.0
WP_038399446.1\|553286_554057_+	ATP-binding protein	A0A2H4JC46	uncultured_Caudovirales_phage	1.1e-142	99.6
WP_002468163.1\|554050_554212_+	hypothetical protein	A0A2H4JI18	uncultured_Caudovirales_phage	6.6e-21	94.3
WP_002468151.1\|554211_554457_+	hypothetical protein	A0A141VTS2	Staphylococcus_phage	8.2e-39	96.3
WP_002468165.1\|554465_554873_+	RusA family crossover junction endodeoxyribonuclease	A0A2H4JCD7	uncultured_Caudovirales_phage	2.9e-73	100.0
WP_002468127.1\|554873_555071_+	hypothetical protein	A0A2H4JHY7	uncultured_Caudovirales_phage	7.3e-30	100.0
WP_002468115.1\|555071_555431_+	hypothetical protein	A0A2H4JDR1	uncultured_Caudovirales_phage	1.3e-61	100.0
WP_002468121.1\|555427_555880_+	DUF3310 domain-containing protein	A0A2H4JC33	uncultured_Caudovirales_phage	1.6e-80	100.0
WP_002468135.1\|555869_556070_+	hypothetical protein	A0A2H4JHF0	uncultured_Caudovirales_phage	7.4e-30	100.0
WP_038399575.1\|556087_556348_-	hypothetical protein	A0A2H4JG55	uncultured_Caudovirales_phage	2.9e-42	98.8
WP_002468111.1\|556461_556884_+	dUTP diphosphatase	A0A2H4JHY2	uncultured_Caudovirales_phage	3.2e-75	100.0
WP_002498306.1\|557003_557306_-	hypothetical protein	A0A2H4J741	uncultured_Caudovirales_phage	1.6e-31	69.0
WP_002468120.1\|557410_557551_+	hypothetical protein	A0A2H4JDQ4	uncultured_Caudovirales_phage	2.9e-17	100.0
WP_002468131.1\|557593_557743_+	DUF1514 domain-containing protein	A0A2H4J8R9	uncultured_Caudovirales_phage	5.9e-16	97.9
WP_002468152.1\|557759_558206_+	transcriptional regulator	A0A2H4JC78	uncultured_Caudovirales_phage	3.7e-82	100.0
WP_032601667.1\|558689_559040_+	HNH endonuclease	A0A2H4JI70	uncultured_Caudovirales_phage	6.8e-63	100.0
WP_038399447.1\|559182_559653_+\|terminase	phage terminase small subunit P27 family	A0A2H4J985	uncultured_Caudovirales_phage	8.8e-82	98.1
WP_038399448.1\|559645_561397_+\|terminase	terminase large subunit	H9A111	Staphylococcus_phage	0.0e+00	97.9
WP_002500102.1\|561408_561603_+	hypothetical protein	A0A2H4J9T6	uncultured_Caudovirales_phage	5.3e-25	100.0
WP_038399449.1\|561605_562838_+\|portal	phage portal protein	A0A2H4JDG3	uncultured_Caudovirales_phage	6.7e-230	98.0
WP_038399450.1\|562827_563385_+\|head,protease	HK97 family phage prohead protease	A0A2H4JDE6	uncultured_Caudovirales_phage	1.6e-98	95.7
WP_038399451.1\|563426_564785_+\|capsid	phage major capsid protein	A0A2H4J4F8	uncultured_Caudovirales_phage	3.5e-179	91.8
WP_002456400.1\|564803_565145_+\|head,tail	phage gp6-like head-tail connector protein	A0A2H4JB77	uncultured_Caudovirales_phage	3.9e-55	95.6
WP_002456401.1\|565134_565464_+	hypothetical protein	A0A2H4J9E0	uncultured_Caudovirales_phage	4.0e-57	98.2
WP_038399452.1\|565460_565865_+	hypothetical protein	A0A2H4J3L8	uncultured_Caudovirales_phage	7.6e-66	94.0
WP_002485830.1\|565869_566274_+	hypothetical protein	A0A2H4JEG7	uncultured_Caudovirales_phage	3.5e-71	98.5
WP_002485825.1\|566286_566916_+\|tail	phage tail protein	A0A2H4JBK5	uncultured_Caudovirales_phage	4.6e-110	96.2
WP_002456405.1\|566934_567120_+	hypothetical protein	A0A2H4J420	uncultured_Caudovirales_phage	1.3e-25	98.4
WP_002485828.1\|567190_567553_+	hypothetical protein	A0A2H4J4J1	uncultured_Caudovirales_phage	1.2e-59	98.3
WP_154224849.1\|567585_567738_+	hypothetical protein	H9A123	Staphylococcus_phage	5.2e-20	98.0
WP_038399453.1\|567766_572527_+\|tail	phage tail tape measure protein	A0A2H4JBT3	uncultured_Caudovirales_phage	0.0e+00	96.5
WP_002468177.1\|572528_573362_+\|tail	phage tail family protein	A0A2H4J498	uncultured_Caudovirales_phage	2.8e-163	100.0
WP_172643075.1\|573371_574931_+\|tail	phage tail protein	H9A128	Staphylococcus_phage	5.5e-298	98.1
WP_002504159.1\|574923_575097_+	hypothetical protein	A0A2H4J3L2	uncultured_Caudovirales_phage	5.2e-24	100.0
WP_038399455.1\|575112_576975_+	DUF2817 domain-containing protein	A0A2H4J3L1	uncultured_Caudovirales_phage	0.0e+00	99.0
WP_038399456.1\|576974_578189_+\|plate	BppU family phage baseplate upper protein	A0A2H4JBZ7	uncultured_Caudovirales_phage	2.1e-207	99.0
WP_038399576.1\|578193_578817_+	poly-gamma-glutamate hydrolase family protein	A0A2H4JC07	uncultured_Caudovirales_phage	2.5e-116	100.0
WP_002497615.1\|578813_579239_+	hypothetical protein	A0A2H4J427	uncultured_Caudovirales_phage	1.0e-73	100.0
WP_038399457.1\|579225_579633_+	hypothetical protein	A0A2H4JEX3	uncultured_Caudovirales_phage	8.7e-70	100.0
WP_038399458.1\|579790_580189_+	YxeA family protein	A0A2H4JEL3	uncultured_Caudovirales_phage	3.2e-48	81.1
WP_002468157.1\|580252_580663_+\|holin	phage holin	A0A2H4JI56	uncultured_Caudovirales_phage	7.0e-67	99.3
WP_038399459.1\|580637_582101_+	SH3 domain-containing protein	A0A2H4JC36	uncultured_Caudovirales_phage	1.4e-298	99.6
WP_002468147.1\|583099_583279_+	hypothetical protein	A0A2H4JHW3	uncultured_Caudovirales_phage	7.5e-26	100.0
WP_001831994.1\|583941_584088_+	hypothetical protein	NA	NA	NA	NA
WP_002495357.1\|584078_584432_+	hypothetical protein	NA	NA	NA	NA
WP_002439013.1\|584934_585960_+	DUF21 domain-containing protein	NA	NA	NA	NA
WP_001831962.1\|586326_587175_+	DUF72 domain-containing protein	A0A1D6Y809	Golden_Marseillevirus	5.4e-13	25.9
WP_002456119.1\|587187_588015_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_002439019.1\|588100_589420_+	bifunctional metallophosphatase/5'-nucleotidase	NA	NA	NA	NA
WP_001831979.1\|589508_590423_+	lipoyl synthase	NA	NA	NA	NA
WP_001831895.1\|590609_590999_+	DUF1027 domain-containing protein	NA	NA	NA	NA
WP_002439025.1\|591058_591325_-	DUF3055 domain-containing protein	NA	NA	NA	NA
WP_001831932.1\|591443_591878_+	DUF86 domain-containing protein	NA	NA	NA	NA
WP_001831998.1\|591877_592657_+	TIGR01457 family HAD-type hydrolase	NA	NA	NA	NA
WP_002439032.1\|592698_593670_+	D-glycerate dehydrogenase	NA	NA	NA	NA
WP_001831913.1\|594075_594222_+	teichoic acid D-Ala incorporation-associated protein DltX	NA	NA	NA	NA
WP_001831977.1\|594237_595695_+	D-alanine--poly(phosphoribitol) ligase subunit DltA	A0A2K9L3I8	Tupanvirus	2.1e-41	27.5
WP_002439035.1\|595691_596906_+	D-alanyl-lipoteichoic acid biosynthesis protein DltB	A0A125RNP0	Pseudomonas_phage	4.5e-21	28.0
596235:596255	attR	NA	NA	NA	NA
WP_001831996.1\|596923_597160_+	D-alanine--poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA
WP_001831904.1\|597156_598395_+	D-alanyl-lipoteichoic acid biosynthesis protein DltD	NA	NA	NA	NA
WP_104832450.1\|598800_599979_+\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.7e-61	37.2
WP_002494449.1\|600075_601755_-\|transposase	IS1182-like element ISSep1 family transposase	A0ZS58	Staphylococcus_virus	1.1e-243	77.6

DBSCAN-SWA_5

735455 : 743925

Synechococcus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001831735.1\|735455_735938_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.2e-21	43.3
WP_038399470.1\|735924_737052_+	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_001831723.1\|737052_737757_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	H8ZMN3	Synechococcus_phage	1.6e-47	42.5
WP_001831728.1\|737756_738017_+	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_001831727.1\|738018_738690_+	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA
WP_002494325.1\|738682_740872_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.1e-139	40.4
WP_001831721.1\|740850_742335_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.4e-45	31.9
WP_001831685.1\|742327_743359_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	2.1e-64	43.4
WP_001831672.1\|743358_743925_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.1e-29	40.0

DBSCAN-SWA_6

964048 : 1016845

Staphylococcus_phage(55.56%)

integrase,head,terminase,plate,holin,tRNA,tail,capsid,portal

attL 984306:984365|attR 1017033:1017097

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002439565.1\|964048_965593_+\|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	NA	NA	NA	NA
WP_002439569.1\|965594_965960_+	YlbF family regulator	NA	NA	NA	NA
WP_001829480.1\|965983_966478_+	energy coupling factor transporter S component ThiW	NA	NA	NA	NA
WP_002456219.1\|966675_969297_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	2.9e-41	23.3
WP_002439573.1\|969311_971249_+	DNA mismatch repair endonuclease MutL	A0A1B2LRQ5	Wolbachia_phage	1.1e-61	30.6
WP_002439577.1\|971262_971796_+	glycerol-3-phosphate responsive antiterminator	NA	NA	NA	NA
WP_001829504.1\|972170_972995_+	aquaporin family protein	NA	NA	NA	NA
WP_002439580.1\|973148_974648_+	glycerol kinase GlpK	NA	NA	NA	NA
WP_002439581.1\|974824_976498_+	glycerol-3-phosphate dehydrogenase/oxidase	NA	NA	NA	NA
WP_001832556.1\|976721_977648_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_002494415.1\|977659_978658_+\|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	NA	NA	NA	NA
WP_001829517.1\|978611_978851_+	RNA chaperone Hfq	NA	NA	NA	NA
WP_001829502.1\|979072_979549_-	glutathione peroxidase	Q70H87	Fowlpox_virus	6.9e-26	43.0
WP_002439586.1\|979649_980900_+	GTPase HflX	NA	NA	NA	NA
WP_001829506.1\|980915_982154_+	methionine gamma-lyase family protein	NA	NA	NA	NA
WP_001829488.1\|982634_983000_+	MerR family transcriptional regulator	NA	NA	NA	NA
WP_001829492.1\|983018_984359_+	type I glutamate--ammonia ligase	NA	NA	NA	NA
984306:984365	attL	NA	NA	NA	NA
WP_002494413.1\|984587_985715_-\|integrase	site-specific integrase	Q6A1Z6	Oenococcus_phage	1.8e-27	30.2
WP_002476027.1\|985767_986460_-	Ltp family lipoprotein	A0A2H4J5B8	uncultured_Caudovirales_phage	3.7e-12	53.5
WP_002494412.1\|986471_986846_-	hypothetical protein	NA	NA	NA	NA
WP_002475322.1\|986995_987340_-	helix-turn-helix transcriptional regulator	A0A2H4JCV3	uncultured_Caudovirales_phage	1.1e-25	58.6
WP_002475333.1\|987511_987751_+	hypothetical protein	A0A1Q1PVU3	Staphylococcus_phage	1.9e-16	58.7
WP_002494410.1\|987754_987946_+	hypothetical protein	NA	NA	NA	NA
WP_002475323.1\|988074_988254_-	hypothetical protein	NA	NA	NA	NA
WP_032604716.1\|988304_988583_+	hypothetical protein	NA	NA	NA	NA
WP_002493719.1\|988599_988794_+	DUF1270 family protein	NA	NA	NA	NA
WP_002494406.1\|988849_989116_+	hypothetical protein	A0A2H4JAK6	uncultured_Caudovirales_phage	2.3e-18	57.5
WP_002494405.1\|989120_989660_+	host-nuclease inhibitor Gam family protein	A0A0H3U480	Staphylococcus_phage	2.6e-61	68.5
WP_002494404.1\|990456_990960_+	DUF669 domain-containing protein	A9CR64	Staphylococcus_phage	8.9e-56	59.9
WP_002494403.1\|990985_991927_+	DnaD domain protein	A0A2I6PDG7	Staphylococcus_phage	1.6e-53	52.3
WP_002475332.1\|992361_992547_+	helix-turn-helix transcriptional regulator	A0A0H4IP57	Staphylococcus_phage	9.2e-19	76.7
WP_002494402.1\|992653_993178_+	dUTP pyrophosphatase	A9CR88	Staphylococcus_phage	8.1e-60	70.2
WP_002494974.1\|993184_993424_+	hypothetical protein	NA	NA	NA	NA
WP_002476004.1\|993465_993969_+	DNA-directed RNA polymerase sigma-70 factor	NA	NA	NA	NA
WP_002494401.1\|994315_994510_+	hypothetical protein	A0A2H4PQT0	Staphylococcus_phage	4.1e-17	66.7
WP_002494400.1\|994719_995148_+\|terminase	terminase small subunit	H9A0M8	Staphylococcus_phage	3.4e-40	65.2
WP_002476011.1\|995134_996409_+\|terminase	PBSX family phage terminase large subunit	Q4ZE37	Staphylococcus_virus	1.4e-190	73.3
WP_002494399.1\|996423_997866_+\|portal	phage portal protein	Q4ZE36	Staphylococcus_virus	1.4e-183	67.7
WP_038399480.1\|997858_999238_+\|capsid	minor capsid protein	A0A1J0MFV1	Staphylococcus_phage	2.6e-113	58.2
WP_002502928.1\|999257_999497_+	hypothetical protein	NA	NA	NA	NA
WP_002494396.1\|999658_1000255_+	DUF4355 domain-containing protein	A0A1J0MFB3	Staphylococcus_phage	1.8e-15	44.7
WP_002476012.1\|1000275_1001169_+	hypothetical protein	H9A0N3	Staphylococcus_phage	2.4e-88	58.8
WP_002476013.1\|1001266_1001593_+\|head,tail	phage head-tail connector protein	Q4ZE31	Staphylococcus_virus	1.5e-27	57.3
WP_002494395.1\|1001592_1001916_+	hypothetical protein	A0A1J0MF86	Staphylococcus_phage	3.2e-14	39.4
WP_002494394.1\|1001896_1002247_+	HK97 gp10 family phage protein	A0A1J0MFN9	Staphylococcus_phage	4.9e-37	64.7
WP_002494393.1\|1002259_1002649_+	hypothetical protein	NA	NA	NA	NA
WP_002494392.1\|1002664_1003255_+\|tail	phage major tail protein, TP901-1 family	H9A0N8	Staphylococcus_phage	3.0e-34	59.4
WP_002494391.1\|1003315_1003660_+	hypothetical protein	A0A1J0MFH0	Staphylococcus_phage	4.1e-36	61.9
WP_032604719.1\|1003719_1004073_+	hypothetical protein	Q4ZE25	Staphylococcus_virus	9.7e-33	63.5
WP_038399481.1\|1004085_1007067_+	membrane protein	Q4ZE24	Staphylococcus_virus	1.6e-80	46.9
WP_002494387.1\|1007081_1008017_+\|tail	phage tail family protein	A0A1J0MF79	Staphylococcus_phage	6.4e-100	54.0
WP_002494386.1\|1008025_1009411_+	hypothetical protein	Q4ZE19	Staphylococcus_virus	3.6e-123	50.6
WP_002494385.1\|1009415_1010108_+	hypothetical protein	A0A1J0MFD6	Staphylococcus_phage	6.9e-83	83.5
WP_002494384.1\|1010119_1011133_+	SGNH/GDSL hydrolase family protein	Q8LTH0	Staphylococcus_virus	8.2e-101	54.9
WP_002494978.1\|1011149_1012427_+\|plate	phage baseplate upper protein	Q4ZE15	Staphylococcus_virus	1.2e-120	51.3
WP_002494383.1\|1012439_1012835_+\|holin	phage holin family protein	D7RWK5	Brochothrix_phage	3.0e-14	43.8
WP_002494382.1\|1012885_1013812_+	N-acetylmuramoyl-L-alanine amidase	A0A1W6JNM6	Staphylococcus_phage	9.9e-61	54.0
WP_002494380.1\|1015104_1015725_+	hypothetical protein	NA	NA	NA	NA
WP_002474886.1\|1016062_1016209_+	hypothetical protein	A0A2H4PQP6	Staphylococcus_phage	3.3e-11	76.6
WP_002474889.1\|1016653_1016845_+	hypothetical protein	M9NSU5	Staphylococcus_phage	1.8e-09	52.5
1017033:1017097	attR	NA	NA	NA	NA

DBSCAN-SWA_7

1489304 : 1537344

Staphylococcus_phage(81.82%)

integrase,transposase,tRNA

attL 1480537:1480553|attR 1540152:1540168

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1480537:1480553	attL	NA	NA	NA	NA
WP_038399505.1\|1489304_1500383_-	YSIRK signal domain/LPXTG anchor domain surface protein	A0A2H4PQU6	Staphylococcus_phage	7.0e-28	29.3
WP_001830891.1\|1500787_1501099_-	rhodanese-like domain-containing protein	A0A2H4PQR9	Staphylococcus_phage	4.1e-35	71.8
WP_001830785.1\|1501124_1503542_-\|tRNA	leucine--tRNA ligase	A0A2H4PQS0	Staphylococcus_phage	0.0e+00	87.4
WP_038399506.1\|1503830_1505045_-	MFS transporter	A0A2H4PQR6	Staphylococcus_phage	3.0e-182	83.5
WP_002485800.1\|1505151_1506105_+	TIGR01212 family radical SAM protein	A0A2H4PQV5	Staphylococcus_phage	3.3e-67	84.7
WP_001830894.1\|1506101_1506665_+	class I SAM-dependent methyltransferase	A0A2H4PQV0	Staphylococcus_phage	1.9e-67	66.5
WP_135558899.1\|1506837_1508016_-\|transposase	IS110 family transposase	A0A1X9I619	Streptococcus_phage	5.7e-61	37.2
WP_001830809.1\|1508461_1508863_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_038399507.1\|1510425_1511478_+	proline dehydrogenase	A0A2H4PQT6	Staphylococcus_phage	1.6e-131	70.3
WP_002456446.1\|1511496_1511958_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.2e-59	84.2
WP_002502922.1\|1511970_1513152_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	A0A2H4PQS2	Staphylococcus_phage	3.3e-178	75.8
WP_002494783.1\|1513164_1513797_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	1.4e-87	77.6
WP_002494782.1\|1513803_1514847_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	8.9e-135	66.8
WP_002484471.1\|1515282_1516767_-	FAD/NAD(P)-binding protein	A0A2H4PQX2	Staphylococcus_phage	2.5e-13	65.6
WP_001830727.1\|1517114_1517966_-	glucosaminidase domain-containing protein	A0A1J0MFB0	Staphylococcus_phage	1.0e-32	35.6
WP_002456441.1\|1518343_1518559_-	hypothetical protein	NA	NA	NA	NA
WP_002484457.1\|1518766_1519246_+	sigma-70 family RNA polymerase sigma factor	A0A2H4PQT5	Staphylococcus_phage	9.1e-26	42.9
WP_001830734.1\|1519251_1519695_+	competence protein ComK	NA	NA	NA	NA
WP_002467846.1\|1519681_1520125_-	hypothetical protein	A0A2H4PQT8	Staphylococcus_phage	4.1e-20	43.5
WP_002495070.1\|1520264_1520978_-	transaldolase	M1PR54	Cyanophage	7.0e-22	37.4
WP_002446728.1\|1521254_1521563_+	hypothetical protein	NA	NA	NA	NA
WP_001830726.1\|1521601_1521967_+	fluoride efflux transporter CrcB	A0A2H4PQR0	Staphylococcus_phage	4.1e-34	57.0
WP_001830729.1\|1521963_1522317_+	CrcB family protein	A0A2H4PQQ7	Staphylococcus_phage	8.5e-05	32.5
WP_002469577.1\|1522643_1522799_-	hypothetical protein	A0A146ICT8	Staphylococcus_phage	5.2e-15	79.6
WP_001829832.1\|1523083_1523920_-	aldo/keto reductase	A0A2H4PQR8	Staphylococcus_phage	1.0e-120	73.3
WP_001829840.1\|1524099_1525008_-	hypothetical protein	A0A2H4PQQ8	Staphylococcus_phage	1.5e-101	80.2
WP_001829830.1\|1525110_1526310_-	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	4.1e-192	85.4
WP_001832979.1\|1526679_1528272_+	phosphoenolpyruvate carboxykinase (ATP)	A0A2H4PQN1	Staphylococcus_phage	2.7e-268	83.2
WP_002456431.1\|1528502_1529288_-	S9 family peptidase	A0A2H4PQM6	Staphylococcus_phage	2.0e-99	71.3
WP_002456430.1\|1529274_1529742_-	nucleoside triphosphatase YtkD	A0A2H4PQM4	Staphylococcus_phage	5.5e-44	57.4
WP_002457867.1\|1529812_1530061_+	membrane protein insertion efficiency factor YidD	A0A2H4PQM5	Staphylococcus_phage	6.5e-36	83.1
WP_001829851.1\|1530057_1531059_-	o-succinylbenzoate synthase	A0A2H4PQM0	Staphylococcus_phage	6.9e-92	50.2
WP_002456429.1\|1531048_1532473_-	o-succinylbenzoate--CoA ligase	A0A2H4PQM9	Staphylococcus_phage	6.6e-173	63.9
WP_002456427.1\|1533723_1534389_+	Ltp family lipoprotein	A0A2H4J5B8	uncultured_Caudovirales_phage	7.0e-08	41.8
WP_002456426.1\|1534550_1534838_+	hypothetical protein	A0A2H4JGN1	uncultured_Caudovirales_phage	5.5e-18	50.0
WP_002456424.1\|1535364_1536099_+	hypothetical protein	NA	NA	NA	NA
WP_002456423.1\|1536478_1536691_-	hypothetical protein	A0A2H4JCA1	uncultured_Caudovirales_phage	7.3e-20	72.9
WP_002456422.1\|1536849_1537344_+\|integrase	site-specific integrase	B7T092	Staphylococcus_virus	3.8e-67	76.1
1540152:1540168	attR	NA	NA	NA	NA

DBSCAN-SWA_8

1668368 : 1682378

uncultured_Caudovirales_phage(70.0%)

integrase,terminase

attL 1663035:1663053|attR 1680418:1680436

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1663035:1663053	attL	NA	NA	NA	NA
WP_002494633.1\|1668368_1668554_-	hypothetical protein	A0A2H4JBF3	uncultured_Caudovirales_phage	1.8e-22	88.5
WP_002494634.1\|1668623_1668950_-	sigma-70 family RNA polymerase sigma factor	A0A2H4JB14	uncultured_Caudovirales_phage	5.9e-53	95.4
WP_002470295.1\|1668946_1669264_-	hypothetical protein	A0A2H4JEA5	uncultured_Caudovirales_phage	3.0e-49	93.3
WP_002470316.1\|1669260_1669794_-	hypothetical protein	A0A2H4JB26	uncultured_Caudovirales_phage	4.9e-89	92.7
WP_002470314.1\|1669854_1670328_-\|terminase	phage terminase small subunit P27 family	A0A2H4JB21	uncultured_Caudovirales_phage	1.2e-78	95.5
WP_002494635.1\|1671743_1672202_-	hypothetical protein	A0A2H4JGU4	uncultured_Caudovirales_phage	1.6e-75	96.7
WP_002470304.1\|1672214_1672835_-	hypothetical protein	A0A2H4JFF8	uncultured_Caudovirales_phage	1.6e-102	92.2
WP_002488991.1\|1673102_1673276_-	hypothetical protein	A0A2H4JHE6	uncultured_Caudovirales_phage	6.8e-24	94.7
WP_038399514.1\|1673674_1675942_-	DNA primase	A0A2H4JCU9	uncultured_Caudovirales_phage	0.0e+00	74.9
WP_002470335.1\|1676041_1676332_-	DUF1474 family protein	A0A1W6JPG5	Staphylococcus_phage	6.9e-29	68.0
WP_002470311.1\|1676343_1676550_-	hypothetical protein	A0A2H4JHP9	uncultured_Caudovirales_phage	1.4e-28	97.1
WP_002470318.1\|1676560_1676899_-	hypothetical protein	A0A1W6JPD3	Staphylococcus_phage	4.8e-21	50.9
WP_002470303.1\|1676900_1677104_-	hypothetical protein	NA	NA	NA	NA
WP_002470330.1\|1677107_1677251_-	hypothetical protein	A0A2H4JB03	uncultured_Caudovirales_phage	1.3e-12	91.5
WP_002470305.1\|1677243_1677564_-	excisionase family DNA-binding protein	A0A2H4JE99	uncultured_Caudovirales_phage	3.9e-49	94.3
WP_002470327.1\|1677577_1678219_-	phage repressor protein	A0A2H4JB17	uncultured_Caudovirales_phage	2.4e-106	90.6
WP_002470299.1\|1678222_1678441_-	helix-turn-helix transcriptional regulator	A0A1W6JPB7	Staphylococcus_phage	3.0e-24	86.1
WP_002470325.1\|1678638_1679166_+	helix-turn-helix transcriptional regulator	A0A1W6JPB6	Staphylococcus_phage	1.1e-83	93.7
WP_002494637.1\|1679174_1680350_+\|integrase	site-specific integrase	A0A2H4JFF0	uncultured_Caudovirales_phage	3.6e-217	97.4
WP_002447508.1\|1680418_1682038_-	chaperonin GroEL	A0A240F779	uncultured_virus	1.5e-157	54.2
1680418:1680436	attR	NA	NA	NA	NA
WP_001830378.1\|1682093_1682378_-	co-chaperone GroES	A0A221S386	uncultured_virus	1.5e-12	43.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_HG813242

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection