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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009210 Burkholderia pseudomallei strain BDP chromosome 2, complete sequence 3 crisprs csa3,cas3,DinG 1 0 6 0
NZ_CP009209 Burkholderia pseudomallei strain BDP chromosome 1, complete sequence 1 crisprs csa3,DEDDh,cas3,WYL 0 0 9 0

Results visualization

1. NZ_CP009210
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009210_1 629575-629737 Orphan NA
2 spacers
csa3

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009210_2 823306-823391 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009210_3 2422348-2422512 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP009210_1 1.2|629690|21|NZ_CP009210|CRISPRCasFinder 629690-629710 21 NZ_CP009210.1 629722-629742 0 1.0
NZ_CP009210_1 1.2|629690|21|NZ_CP009210|CRISPRCasFinder 629690-629710 21 NZ_CP009210.1 629730-629750 0 1.0
NZ_CP009210_1 1.2|629690|21|NZ_CP009210|CRISPRCasFinder 629690-629710 21 NZ_CP009210.1 629738-629758 0 1.0

1. spacer 1.2|629690|21|NZ_CP009210|CRISPRCasFinder matches to position: 629722-629742, mismatch: 0, identity: 1.0

gacagcacgacagcacgacag	CRISPR spacer
gacagcacgacagcacgacag	Protospacer
*********************

2. spacer 1.2|629690|21|NZ_CP009210|CRISPRCasFinder matches to position: 629730-629750, mismatch: 0, identity: 1.0

gacagcacgacagcacgacag	CRISPR spacer
gacagcacgacagcacgacag	Protospacer
*********************

3. spacer 1.2|629690|21|NZ_CP009210|CRISPRCasFinder matches to position: 629738-629758, mismatch: 0, identity: 1.0

gacagcacgacagcacgacag	CRISPR spacer
gacagcacgacagcacgacag	Protospacer
*********************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 70087 : 151152 46 Leptospira_phage(22.22%) tRNA,transposase,protease NA
DBSCAN-SWA_2 523598 : 594905 45 Planktothrix_phage(15.38%) integrase,transposase,plate attL 518226:518245|attR 598504:598523
DBSCAN-SWA_3 1492747 : 1502073 11 Burkholderia_virus(57.14%) integrase,transposase attL 1487677:1487693|attR 1513877:1513893
DBSCAN-SWA_4 1654754 : 1726269 53 Vibrio_phage(25.0%) holin,plate NA
DBSCAN-SWA_5 2460466 : 2467227 8 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_6 3026198 : 3078993 41 Bacillus_virus(20.0%) transposase,plate NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP009209
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009209_1 3247518-3247659 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 166552 : 174745 12 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_2 367896 : 436813 82 uncultured_Caudovirales_phage(27.03%) integrase,plate,protease,tail,terminase,head,portal,tRNA,capsid attL 409716:409733|attR 425856:425873
DBSCAN-SWA_3 610925 : 690162 82 Burkholderia_virus(30.3%) integrase,protease,tail,terminase,head,portal,holin attL 660811:660828|attR 683600:683617
DBSCAN-SWA_4 765334 : 774149 8 Tanapox_virus(16.67%) NA NA
DBSCAN-SWA_5 1112464 : 1121709 7 unidentified_phage(16.67%) NA NA
DBSCAN-SWA_6 1427029 : 1484929 53 Burkholderia_phage(36.36%) tRNA,tail,plate NA
DBSCAN-SWA_7 1742193 : 1753412 11 Burkholderia_phage(20.0%) integrase attL 1739397:1739414|attR 1755983:1756000
DBSCAN-SWA_8 1967914 : 2033162 57 Vibrio_phage(12.5%) tRNA,protease,portal,transposase NA
DBSCAN-SWA_9 2788259 : 2799216 10 Streptococcus_phage(16.67%) protease NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage