CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP008912	Burkholderia pseudomallei HBPUB10134a chromosome 2, complete sequence	3 crisprs	csa3,cas3,DinG,PD-DExK	2	9	5	0
NZ_CP008911	Burkholderia pseudomallei HBPUB10134a chromosome 1, complete sequence	2 crisprs	WYL,cas3,DEDDh,csa3,DinG	0	0	8	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008912_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008912_1

2403574-2404221

Orphan

Consensus_repeat	Method
CCCGTNGCCGTGCTNNNN	CRT

15 spacers

The CRISPR arrays of NZ_CP008912_1

>merge|NZ_CP008912|1|2403574-2404221|CRT
CCCATCGCCGTGCTCGATTCACCCGACGCGGTGGCATCCTGCCCCGTCGCCGTGCTTGATGTGCCCGACGCGGTGGCATCCTGACCCGTTGCCGTGCTGTTGTTCCCCGTCGCTTGCGAACCTTGGCCCGTTGCCGTGCTCGATGTGCCCGACGCGGTGGCATCCTGACCCGTTGCCGTGCTGTTGTCCCCCGTCGCTTGCGAGCCTTGGCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAACCTTGGCCCGTCGCCGTGCTCGATTCACCCGACGCGATAGCATCTTGACCCGTTGCCGTGCTGTTATCCCCGGTCGCTTGCGAACCTTGGCCCGTTGCCGTGCTCGATTCACCCGACGCGGTAGCATCCTGCCCCGTTGCCGTGCTGTTGCTGCCCGTCGCTTGCGAACCTTGGCCCGTCGCCGTGCTCGATGTGCCCGACGCAGTGGCATCCTGACCCGTTGCCGTGCTGTTGCTACCCGTCGCTTGCGAACCTTGGCCCGTCGCCGTGCTCGATGTGCCCGACGCGGTGGCATCCTGACCCGTTGCCGTGCTGTTGCTACCCGTCGCATGCGAGCCTTGGCCCGTTGCCGTGCTATGACTGCCCGTCGCCTGCGCACCGTTACCCAGTGCGGTGCTTTGC

>NZ_CP008912|1|1|2403574-2404221|CRT
CCCATCGCCGTGCTCGAT	TCACCCGACGCGGTGGCATCCTGC
CCCGTCGCCGTGCTTGAT	GTGCCCGACGCGGTGGCATCCTGA
CCCGTTGCCGTGCTGTTG	TTCCCCGTCGCTTGCGAACCTTGG
CCCGTTGCCGTGCTCGAT	GTGCCCGACGCGGTGGCATCCTGA
CCCGTTGCCGTGCTGTTG	TCCCCCGTCGCTTGCGAGCCTTGG
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAACCTTGG
CCCGTCGCCGTGCTCGAT	TCACCCGACGCGATAGCATCTTGA
CCCGTTGCCGTGCTGTTA	TCCCCGGTCGCTTGCGAACCTTGG
CCCGTTGCCGTGCTCGAT	TCACCCGACGCGGTAGCATCCTGC
CCCGTTGCCGTGCTGTTG	CTGCCCGTCGCTTGCGAACCTTGG
CCCGTCGCCGTGCTCGAT	GTGCCCGACGCAGTGGCATCCTGA
CCCGTTGCCGTGCTGTTG	CTACCCGTCGCTTGCGAACCTTGG
CCCGTCGCCGTGCTCGAT	GTGCCCGACGCGGTGGCATCCTGA
CCCGTTGCCGTGCTGTTG	CTACCCGTCGCATGCGAGCCTTGG
CCCGTTGCCGTGCTATGA	CTGCCCGTCGCCTGCGCACCGTTA
CCCAGTGCGGTGCTTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008912.1\|WP_154220220.1\|2405200_2405560_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_051231975.1\|2395759_2398504_-\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_CP008912.1\|WP_004523721.1\|2412996_2413416_+\|YjbQ-family-protein	unknown	unknown	gnl\|CDD\|223509
NZ_CP008912.1\|WP_024431654.1\|2405904_2407362_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_004549711.1\|2400548_2401103_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|284781
NZ_CP008912.1\|WP_004529616.1\|2414103_2415639_-\|DUF2875-family-protein	unknown	unknown	gnl\|CDD\|288282
NZ_CP008912.1\|WP_004529635.1\|2398616_2399339_-\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|236634
NZ_CP008912.1\|WP_004523700.1\|2391865_2392405_-\|type-VI-secretion-system-contractile-sheath-small-subunit	unknown	unknown	gnl\|CDD\|226047
NZ_CP008912.1\|WP_004553065.1\|2408511_2410107_+\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|238833
NZ_CP008912.1\|WP_004524152.1\|2413830_2414094_-\|PAAR-domain-containing-protein	unknown	unknown	gnl\|CDD\|269829
NZ_CP008912.1\|WP_004523708.1\|2401113_2401329_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_004531579.1\|2394473_2395163_-\|DotU-family-type-IV/VI-secretion-system-protein	unknown	unknown	gnl\|CDD\|378275
NZ_CP008912.1\|WP_024431232.1\|2415777_2418018_-\|DUF3274-domain-containing-protein	unknown	unknown	gnl\|CDD\|371665
NZ_CP008912.1\|WP_004529637.1\|2395194_2395767_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP008912.1\|WP_004538932.1\|2401400_2402852_+\|PhoPQ-regulated-protein	unknown	unknown	gnl\|CDD\|226737
NZ_CP008912.1\|WP_004529618.1\|2411486_2412179_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_024431653.1\|2410103_2410901_+\|DUF2244-domain-containing-protein	unknown	unknown	gnl\|CDD\|378350
NZ_CP008912.1\|WP_004523720.1\|2412650_2412977_+\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|239245
NZ_CP008912.1\|WP_004523706.1\|2399418_2399964_-\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_CP008912.1\|WP_004531578.1\|2392794_2394471_-\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|143586

Protein	Function_ID	Function_description	E-value
NZ_CP008912.1\|WP_051231975.1\|2395759_2398504_-\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_CP008912.1\|WP_004523721.1\|2412996_2413416_+\|YjbQ-family-protein	gnl\|CDD\|223509	COG0432, COG0432, Uncharacterized conserved protein [Function unknown].	1.018e-53
NZ_CP008912.1\|WP_004553065.1\|2408511_2410107_+\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|238833	cd01663, Cyt_c_Oxidase_I, Cytochrome C oxidase subunit I. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Only subunits I and II are essential for function, but subunit III, which is also conserved, may play a role in assembly or oxygen delivery to the active site. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme (heme a3) and a copper ion (CuB). It also contains a low-spin heme (heme a), believed to participate in the transfer of electrons to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from cytochrome c on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are transferred from cytochrome c (the electron donor) to heme a via the CuA binuclear site in subunit II, and directly from heme a to the binuclear center.	0
NZ_CP008912.1\|WP_004549711.1\|2400548_2401103_+\|hypothetical-protein	gnl\|CDD\|284781	pfam07437, YfaZ, YfaZ precursor. This family contains the precursor of the bacterial protein YfaZ (approximately 180 residues long). Many members of this family are hypothetical proteins.	1.94915e-11
NZ_CP008912.1\|WP_004529616.1\|2414103_2415639_-\|DUF2875-family-protein	gnl\|CDD\|288282	pfam11394, DUF2875, Protein of unknown function (DUF2875). This family of proteins with unknown function appear to be restricted to Proteobacteria.	0
NZ_CP008912.1\|WP_004529635.1\|2398616_2399339_-\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	6.76191e-96
NZ_CP008912.1\|WP_004523700.1\|2391865_2392405_-\|type-VI-secretion-system-contractile-sheath-small-subunit	gnl\|CDD\|226047	COG3516, COG3516, Predicted component of the type VI protein secretion system [Intracellular trafficking, secretion, and vesicular transport].	7.24528e-84
NZ_CP008912.1\|WP_004524152.1\|2413830_2414094_-\|PAAR-domain-containing-protein	gnl\|CDD\|269829	cd14744, PAAR_CT_2, proline-alanine-alanine-arginine (PAAR) domain with uncharacterized C-terminal extension. This domain is found in the PAAR (proline-alanine-alanine-arginine) repeat family of mostly beta- and gamma-proteobacteria, and forms a sharp conical extension on the VgrG spike, a trimeric protein complex of the bacterial type VI secretion system (T6SS). Most members contain C-terminal domain extensions corresponding to several uncharacterized domains such as S-type pyocin, DUF2235, DUF2345 and cytotoxic proteins. However, these terminal domains are exposed to solution, and do not distort the binding site of VgrG. The pointed tip of the PAAR domain is stabilized by a zinc atom positioned close to the cone's vertex and is likely to be important for its integrity during penetration of the target cell envelope. VgrG proteins are orthologous to the central baseplate spikes of bacteriophages with contractile tails, and genes encoding proteins with PAAR motifs have been frequently found immediately downstream from vgrG-like genes.	6.77264e-23
NZ_CP008912.1\|WP_004531579.1\|2394473_2395163_-\|DotU-family-type-IV/VI-secretion-system-protein	gnl\|CDD\|378275	pfam09850, DotU, Type VI secretion system protein DotU. DotU is a family of Gram-negative bacterial proteins that form part of the membrane-joining complex of the type VI secretion system. DotU binds tightly to IcmF and together they are tethered to the inner membrane at one end and the peptidoglycan layer at the other; they interact with Lip1 which then tethers the peptidoglycan layer to the outer membrane.	1.02221e-28
NZ_CP008912.1\|WP_024431232.1\|2415777_2418018_-\|DUF3274-domain-containing-protein	gnl\|CDD\|371665	pfam11678, DUF3274, Protein of unknown function (DUF3274). This bacterial family of proteins has no known function.	9.77273e-152
NZ_CP008912.1\|WP_004529637.1\|2395194_2395767_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	2.61685e-22
NZ_CP008912.1\|WP_004538932.1\|2401400_2402852_+\|PhoPQ-regulated-protein	gnl\|CDD\|226737	COG4287, PqaA, PhoPQ-activated pathogenicity-related protein [General function prediction only].	0
NZ_CP008912.1\|WP_024431653.1\|2410103_2410901_+\|DUF2244-domain-containing-protein	gnl\|CDD\|378350	pfam10003, DUF2244, Integral membrane protein (DUF2244). This domain, found in various bacterial hypothetical and putative membrane proteins, has no known function.	1.92528e-38
NZ_CP008912.1\|WP_004523720.1\|2412650_2412977_+\|thioredoxin-family-protein	gnl\|CDD\|239245	cd02947, TRX_family, TRX family; composed of two groups: Group I, which includes proteins that exclusively encode a TRX domain; and Group II, which are composed of fusion proteins of TRX and additional domains. Group I TRX is a small ancient protein that alter the redox state of target proteins via the reversible oxidation of an active site dithiol, present in a CXXC motif, partially exposed at the protein's surface. TRX reduces protein disulfide bonds, resulting in a disulfide bond at its active site. Oxidized TRX is converted to the active form by TRX reductase, using reducing equivalents derived from either NADPH or ferredoxins. By altering their redox state, TRX regulates the functions of at least 30 target proteins, some of which are enzymes and transcription factors. It also plays an important role in the defense against oxidative stress by directly reducing hydrogen peroxide and certain radicals, and by serving as a reductant for peroxiredoxins. At least two major types of functional TRXs have been reported in most organisms; in eukaryotes, they are located in the cytoplasm and the mitochondria. Higher plants contain more types (at least 20 TRX genes have been detected in the genome of Arabidopsis thaliana), two of which (types f amd m) are located in the same compartment, the chloroplast. Also included in the alignment are TRX-like domains which show sequence homology to TRX but do not contain the redox active CXXC motif. Group II proteins, in addition to either a redox active TRX or a TRX-like domain, also contain additional domains, which may or may not possess homology to known proteins.	5.63925e-18
NZ_CP008912.1\|WP_004523706.1\|2399418_2399964_-\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	3.16404e-21
NZ_CP008912.1\|WP_004531578.1\|2392794_2394471_-\|OmpA-family-protein	gnl\|CDD\|143586	cd07185, OmpA_C-like, Peptidoglycan binding domains similar to the C-terminal domain of outer-membrane protein OmpA. OmpA-like domains (named after the C-terminal domain of Escherichia coli OmpA protein) have been shown to non-covalently associate with peptidoglycan, a network of glycan chains composed of disaccharides, which are crosslinked via short peptide bridges. Well-studied members of this family include the Escherichia coli outer membrane protein OmpA, the Escherichia coli lipoprotein PAL, Neisseria meningitdis RmpM, which interact with the outer membrane, as well as the Escherichia coli motor protein MotB, and the Vibrio flagellar motor proteins PomB and MotY, which interact with the inner membrane.	7.01518e-35

>NZ_CP008912.1|WP_004538932.1|2401400_2402852_+|PhoPQ-regulated-protein
MLSLAYPRAEAAPIAFPCPIDARRDLTDTLACYRQTVENQPLNYTMTGIVQLPGIEQRTYRLVSQSWSPDQLVRPDTWVHEVALYIPQDALPRRALVIANDGTRHPGEGETPRTPNDFLPDTLADIARSTRTAVISVSDVPNQLLSYADDGKPKAEDDSVARSWTLFMQSPHTRGAMPLHVPMAASIWRAMSLAERELTSLGIHRFVVSGISKRAWTTWLALIGDQRVDAIAPFAIDLLSTRAALENMYRSYGGNWPLAFYPYYAEGIDRTLDSPAFGLLMRIEDPLSYLGTRHGSRLAVPKYIVNASGDDFFVPDNSQRYFDKLPGAKALRMVPNSSHSDIRRATLDSLVPFVKRIQHGKALPQVDAAPIETNGQTILRLRTSERPRQLLLWQATNPLARDFRYACGIRYTSTPIAMNGARPQQLVLVPPTNGWRAYFVEATFDDGFVATSQTYILGDGYPSTSPPAVGGSCRTLPGRDTHS
>NZ_CP008912.1|WP_004523708.1|2401113_2401329_-|hypothetical-protein
MAIVGEPPEELIDRLLRACRPLAPILPIAPMPQAKRRDERRVLQGKTWREMHRALVPFDRRTIQKEKPAAR
>NZ_CP008912.1|WP_004549711.1|2400548_2401103_+|hypothetical-protein
MSRTESSIFAKRSDWPRVFSKLGLVASSIGVFAFMPNARASDYSIAIGNGYQSVSRTPTGTGFGFLLDATRSGEDAYSIGSGLSSGVRIGAVSLTVAGKALHVRSADDRSGLTTPVGVIAGIPAASRLSLVARAFYTPRAVFNAALGAYTQATAGVRWTYKPINLEAGWRYEALKGRNGTRDPR
>NZ_CP008912.1|WP_004523706.1|2399418_2399964_-|type-1-fimbrial-protein
MKKKVVSFAVATLFGLVAAQSVFAQSIDQGQVKFTGELTANTCTIDAGSKDQIVPLPKVSTSALAAPGDVAGSTAFEIKVSKCAADVKKVAAHFEMENMDPNTRTLKNEATGADAATNVTIQLVNSDGTELPVGSTGSYFDVTGTDDARGATMIYGGQYYALDTTTAGKVESHTLFTLAYE
>NZ_CP008912.1|WP_004529635.1|2398616_2399339_-|fimbria/pilus-periplasmic-chaperone
MCVAVAAACCLASTLSQAAIVITGTRVVYPESSREVNVRLNNVEQSPVLVQAWIDDGNAGASPDEIKVPFVLMPPVFRVEPKKGQTLRVMYTGDDLPKDRESVYWLNVLEIPPKPTVEAEQNLLQLAFRTRIKLFFRPSALEDGNAAQARDQLKWKIVRNEKGVSVLRAENRSPYYISISQATAKSGDKSVQFDPGMVPPFGSKEFVSKHDISTLSTHAEIAYKLLNDYGAEVAGSATAE
>NZ_CP008912.1|WP_051231975.1|2395759_2398504_-|fimbrial-biogenesis-outer-membrane-usher-protein
MMIAAGAVACGVGSLCMPVVAAEFDGTRTGEQSRPDAMGEAPSGAEPGARGRQALLVASHASPSAPTTVSFNSRLLMGGGIDLSRFERGNPVVAGIYPVDVTVNGERRGRMDVEFRDVRGGDSAAPCFTRAMLDRLGVEGDIVAKRLDAARDATGAASGQTPTLSASACIGLRDALPDATYTLDSADLTLDLTIPQVDMRKTARGYVDPSRWDNGVNAGLLQYNLSGYASENKFFGNHASSLFLGLQAGANIGAWRVRQRSNLMWANRSAGMSWRSLETYVQRDITALRSQITLGDSYTTGEIFESFGVRGMQLASDDRMLPVSLQSYAPTVRGVADTNARVAVRQRGNVIYEASVPPGPFEFDDLPPTGYGGDLDVTITESDGRTKHFTVPFASVRQLLRPGMQRFNFTVGQYRDALSNGKPWVAQLTYQRGMTNLLTGYAGLLSSTGYASGLIGVALNTPIGAFAFDVTSARTHLPGQGARNGFSSHLSYSKMVPSTGTHFSMAAYRYSTANYYSLADAVTARYGYNAEERAWRNDYRARTRLQLNVNQRIGDRSSAYVSSSLLNYWDGRGRDIQFQAGFSSVFKRVSYTVYAQRSRSSDDRTVTQVGVNLSIPLGSGAYTKRNAFSSLTTSLSRASNGDSSIQANLSGSTAHVVPIDYGVNVSRSVTGDSNFASLGVYGTYRSPFGTYSGNASVDNRARQASFGANGAVVLHRGGVTLSPPLGSAAALVEAKGARGGKLINGQGATIDRFGYAVIPSLMPYRANTVAIDPSELPDDVELANTSEEVVPRNNSIVFVKMETKRGRPVFAATETEDGKPLPMGSELFDVEGKSLGGVGQGGMAFLRGLQGAGNVVAKWGAGASEQCTMPYLVPADQAQAKQSRAIVRIRLRCEPRLSADASQTPRGDGGTRND
>NZ_CP008912.1|WP_004529637.1|2395194_2395767_-|type-1-fimbrial-protein
MIEMNGLKFRRGAARRWPSIAAAAMFAASAACGAPPSPTVTIKFKGSYNPVTCTVVEGNENKTVHLPTISTSSLANAGETAGATGFDISVLCDGYAGNVLAYFENGPTTNENGNLDVEDPSDGQSASGVQVQLLNGDGSPIKVGDISTMKTVSVEASTPTPIPFFARYYATGKSGAGKVRTYVTFVIQML
>NZ_CP008912.1|WP_004531579.1|2394473_2395163_-|DotU-family-type-IV/VI-secretion-system-protein
MSIEMPAQPLRMLLQDTMLHVALLTQGARISRVHDWRARCIALVRQFEQALQDGGYRGGIANELSLAQCVFLDEITMRNLSPEQKEEWLRELLQFRFHSTRDGLSKVRARVDRLCSGHSANAALLEMYSLFHEFGLLGDKQGHALADARVSEARPTPGKKAVETAEVWKDGGAANEAAHGRSWRIVGGLLAFAALMTMWLVIDTRLSHEVEQMEVTSGDEAAIHPASGD
>NZ_CP008912.1|WP_004531578.1|2392794_2394471_-|OmpA-family-protein
MSRQIRFWLVWGAIPFVVLASLCLPLRMQPEWSHVLTIVLIIAAIVLAIEIFEHSRETAQDRAAEAEIDDHELAVIIVAGPHASSLFNSSGDDTAFRREAGALWLRADSVEQLRDTMMRVKASRGRFPDAAVVPLVSESDDESDMRQAFAKWRTELREALCYPDAAYVLPCYLAVYTCLGFKGADGARPKWTGDAIEIGTRQMNAASKVGELLASIRQQLLRPSPTGSSAQCALGLGVFDWLDATALLSSMTMLANTPPFMLKGLTLADVGRRPIRPGAWTRWLTVRTGLHIRQTKSSMAPLPVPRVAKHAESGIREGWSSARHLVSTRASFVPALVFSTVSTLGIAVAVSGWMNSRMIQRVSNDIADYRSGADEWIGRKRFAQARLEHDRTAIVQTLLDGVPTGFGWGLYRGQELLVKLDTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHADSSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVEVLLIPDVSSDRKASGTEL
>NZ_CP008912.1|WP_004523700.1|2391865_2392405_-|type-VI-secretion-system-contractile-sheath-small-subunit
MAISNSSQKFIARNRAPRVQIEYDVEIYGSEKKVELPFVMGVLADLSGKPLEPLPAVGDRKFFSIDIDNFDERMKAMKPRVAFSVPNTLSGDGQLMVDITFESMDDFSPAAIAKKVDALSQLLDARTQLANLQTYMDGKSGAENLVSKVLKDPALLSALAKAPKPVAEQAENRESKEKH
>NZ_CP008912.1|WP_154220220.1|2405200_2405560_+|hypothetical-protein
MMNTPLSTRSTNFNSLVHRLTARLHALVTTRNSSGLLAWKTRDELERLFPAGTPMTHVGWRLGPPHQAVEYPGGCVTWIFLSNGQWLREPGRLLMWSAQTRSLRLTFDREQILTQMQLD
>NZ_CP008912.1|WP_024431654.1|2405904_2407362_+|hypothetical-protein
MPIRQTHIWIFGFVIACVLAMSGPLTYTFENTFQQTVDIDRKKQGTVEEATAFDARSAEQPSAPDADRMHELPRIDAARSPTDHFDELPIHLAAFGGGEPSPSGPLPPGPLPDTSFTPLPFQHGFDTAIHAGPPIPALPESTLARTDAPPRDETPFEPGMPQPSETVDTQLSFYADMVAQAIERTAYDSIALAKLDSDTTAPPDMTPERHDALANMNAPMFYADMLTASIHVPPSNDRTLSVPSLLTHQAIGIAWMELFARELPATATQAAPTRHAVSFAATLQAEPFDLAQWSEPDEAHSDGPPLELDGQRTIAPPYPRAGTLPPGTRPTYTDSPPDTGIVQAAAMLATGFESAGKHAATLRGQPPGADECRMGARAIGLGRSGMERLAIEQFVSSARAAYDCARARIHGRASAFANAPASAQPSNHLDANGDPMRTAFLPRFASEPFQEAFSIPGDTAGIASACAVADDQTGHRNRMAAANSD
>NZ_CP008912.1|WP_004553065.1|2408511_2410107_+|cytochrome-c-oxidase-subunit-I
MSEISTNMPHVRDAAHHAPTGWRRWLFATNHKDIGTLYLLFSIVNLMIGGVMALMIRAELFEPGLQLMRPEFFNQLSTEHGFIMIFGAIMPAFVGLANWMIPLQIGASDMAFARMNNFSFWLLPVSSALLIGSFFVPGGAPAAGWTMYAPLSTQMGPGMDLSIFAIHIAGASSIMGAINIVVTVVNMRAPGLTLMKMPMLAWTWIITSFLLIAIMPVLAGAVTMVLFDRHFGTSFFNASGGGDPVLYQHIFWYFGHPEVYVMILPGFGMISQVIPAFSRKPLFGYASMVYATASIGILSFMVWAHHMFVTGMPVAGQLFFMYATMTIAVPTGVKVFNWVATMWRGSLTFETPMLFSIGFIFVFLIGGLTGVTLAMAPLNVALHGTYYIIAHFHYVMVAASLFSIYAGWYFWVPKWTGYFYDERRGRIHFWGSMISFNVTFFPMHFLGLAGMPRRYADYPAQFTDFNQIATIGAFAFGLMQVYFLFWVALPTYLGKTRRCVDAKPWDGAQGLEWTLPSPAPYHSFETPPAVK
>NZ_CP008912.1|WP_024431653.1|2410103_2410901_+|DUF2244-domain-containing-protein
MTARPRTRRHARAHADAGANANADADADADADANADANADANADADADADADADANVNMKADARCDTRKHAQRHCTHAFVAHDPRLMTRDVAENRRVWLLKRNCALSPRQSLISMGLLAALTLAIAMPFAIAGAWAVFACAIGEIAAMCGCFLRYARHAVDYDCVALTEQRLEVIQCDGAQLRRYDWNPLWVAVDLDAADARDPTIRIRHGSETVLVGRHVTLARRRHVAEELNAALAASAGDFGDTDFAPSVRQRQPEPLAAHR
>NZ_CP008912.1|WP_004529618.1|2411486_2412179_-|hypothetical-protein
MNSQHARFIRPVLGTLCIVSLAALSGCRGDACFGFDGCFDDGGVQTVTLSGTAATGPALASATVNVDCARGSVATLSDGGGHYSVTFDAALPCAITVTSGGTSLHSLAYAGGTFNTTPQTELLLVYLAAQLGTSPARLIGDLPNSSRLQQALENQTNVQAAQTAVVANLQQRYAVMFAVPGFLTTPFFVGQPGVDSDLGALANAGAIDANGMPDALAVSLLQQAGAAHPL
>NZ_CP008912.1|WP_004523720.1|2412650_2412977_+|thioredoxin-family-protein
MHSSQAYTADAPTRAEVDALAGATVIEFGANWCGICAGAQPAIRDAFSVHADVRHLKIEDGPGRPLGRSFGIKLWPTLVFLRDGTEVARVVRPTHAEQIETIGFAALV
>NZ_CP008912.1|WP_004523721.1|2412996_2413416_+|YjbQ-family-protein
MQQSIQHITVEARGRGLVEFTPQVRAFVEVQSVSTGLLTVFCRHTSASLLIQENADPSVQRDIERYFAALAPEDDARYEHDTEGADDMPAHLRTALTQVQLSIPVEHGRMVLGTWQGIYLFEHRRAPHRRDVVLHLIGE
>NZ_CP008912.1|WP_004524152.1|2413830_2414094_-|PAAR-domain-containing-protein
MRGVIRIGDSTSHGGRVETGREGSTVMGRAVACVGDRCTCPMNGHEHCVIVEGDEDVRIEGRAVAFDGHRTSCGATLVSSMPTSGRV
>NZ_CP008912.1|WP_004529616.1|2414103_2415639_-|DUF2875-family-protein
MVSSIRNGVLVALGGIAAAFTASYFWLHSRSAEPPLATSTASSAQSTPAILPPGNNSSPALLAQSGGKFVLEVRGLGLVAGKETNEEIWKAVEAKADNHSTYMSQNPADYPANEDERMTEVELSTRISFKYGARHSVEYWPVPVFIWEPPKAQRADRPGAELSGLRQEASLGVTLLLWQEDANTDDGTSIVEKLFAFFDAHPDVPEAVIVTFDGAATRKLNQTPGYVDTFKQSNIPSMPDSMVSMLVSRSDRVDRLIRPYAVEQTEDVNKNTTDYDVTRLWNYFWKINHDSGPDGFSAHYDAQERKAGVDTPMSPGFVTSAWWQTKLPAFWKTISNKGPGEFKPTPYIPVRWTTWQVKQFDNAPLLGYLHRPIDVKLADAHGKPLKTAQQAQALKAGWQQAVDTLPTGETPKRIFYDTTGDRAWVAPINQALAQSGPSAPSLDDVKEGYDIGRRIGNTGISSPLVQIGLGLIASYHEGGASATIHRRPNGTATIVMVSPPTHKQPDVNPFR
>NZ_CP008912.1|WP_024431232.1|2415777_2418018_-|DUF3274-domain-containing-protein
MNGINDQCFTAARGAGVTMSNRPGDRPVPIPRDLPGVVIFIHGVNDPGAAYATVERGLCQGLNERLSRSDLRPGEYGRRYAAASAAKAEGDSVRYAEVLGDPDMYLYQRAETGGTHSMFLPFYWGYRASDDEIAKISHPGEVKSRVADSDGNLMTRGQYQDIHGNRLDAHFGKGGGFFANATNNIPQMYSPGFEPDKLERTVMQNALAGNTIFAGKSPDRRYFVLAAARLASLIRTIRAVRPSALALEHGMDPRHETITVMGHSQGTIITLLAQAMLKQQGQRCVDCIIMVDTPYSLQFTQDGSQQTGHAKLKTLVDIVNAVTSEPHTIPELAELMIDSAHSCGRAGQNWSKTQGKRPDKGGKHWITFDERDNRGKVYLYFCPEDTVVGLDKVRGIGTFGVPDEVPADGAAASRGKTMPAMTVLEPKRFFQRMWTRLERDQDGRGKRSKVAVGTPPARVPVRDPFQRLTPGPDTDGTMLGTLVESGKNMALQASFKRNDIRFINGEQLKPAYEPDLYGGEVQKGGQVPGHADVAGLMRPDDVTKNVALGNQYAKFKWKDVATTDDPGASIEPHKQAFNRGRPVDEQSHNWRIVPSRSLGSMLSAAATGGRYQTYVIQREETPDEVRKRMRTDADQLEANNYHSGVLLSSENHRWVTAMDVAIGQAVTLDDPDWRQLLLLMADWKMTSRAFKQMKECKAFNRLDKHTRDFLDACSTYYRTGQFPAEKFVMLTLPPLVTSELKAESKT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP008912_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008912_2

2705750-2705870

Orphan

Consensus_repeat	Method
GAGATGCGAGACGGCGAGACGGCGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008912_2

>merge|NZ_CP008912|2|2705750-2705870|CRISPRCasFinder
GCGATGATGAGATGCGAGACGGCGAGACGGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGACGGCGAGACGGCGAGA

>NZ_CP008912|2|1|2705750-2705870|CRISPRCasFinder
GCGATGATGAGATGCGAGACGGCGAGA	CGGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGCGAGATGC
GAGATGCGAGACGGCGAGACGGCGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008912.1\|WP_004523348.1\|2707671_2708049_-\|DUF3175-domain-containing-protein	unknown	unknown	gnl\|CDD\|337995
NZ_CP008912.1\|WP_004523356.1\|2712444_2713752_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_CP008912.1\|WP_004529429.1\|2697298_2697487_+\|DUF3008-family-protein	unknown	unknown	gnl\|CDD\|314387
NZ_CP008912.1\|WP_024431670.1\|2708983_2711110_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_004523345.1\|2701028_2702126_+\|Ku-protein	unknown	unknown	gnl\|CDD\|274290
NZ_CP008912.1\|WP_024431671.1\|2702193_2705697_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|235658
NZ_CP008912.1\|WP_153260203.1\|2708556_2709006_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_004546352.1\|2697531_2697693_+\|DUF1328-domain-containing-protein	unknown	unknown	gnl\|CDD\|227774
NZ_CP008912.1\|WP_004529417.1\|2715780_2716548_+\|FadR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225097
NZ_CP008912.1\|WP_004523357.1\|2713730_2715287_+\|M81-family-metallopeptidase	unknown	unknown	gnl\|CDD\|227763
NZ_CP008912.1\|WP_004529430.1\|2695755_2697231_+\|RNA-polymerase-factor-sigma-54	unknown	unknown	gnl\|CDD\|237109
NZ_CP008912.1\|WP_024431669.1\|2716624_2718055_-\|amino-acid-permease	unknown	unknown	gnl\|CDD\|224038
NZ_CP008912.1\|WP_024431673.1\|2697772_2698159_+\|DUF3022-domain-containing-protein	unknown	unknown	gnl\|CDD\|378603
NZ_CP008912.1\|WP_004541992.1\|2694320_2695079_-\|DUF4397-domain-containing-protein	unknown	unknown	gnl\|CDD\|379570
NZ_CP008912.1\|WP_024431672.1\|2698294_2700421_+\|catalase-HPII	unknown	unknown	gnl\|CDD\|236886
NZ_CP008912.1\|WP_004523355.1\|2711401_2712316_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP008912.1\|WP_004523338.1\|2693365_2694262_-\|manganese-catalase-family-protein	unknown	unknown	gnl\|CDD\|226076
NZ_CP008912.1\|WP_004523344.1\|2700443_2700947_+\|DUF421-domain-containing-protein	unknown	unknown	gnl\|CDD\|225205
NZ_CP008912.1\|WP_004536942.1\|2708056_2708350_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_004523347.1\|2706305_2707625_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223104

Protein	Function_ID	Function_description	E-value
NZ_CP008912.1\|WP_004523348.1\|2707671_2708049_-\|DUF3175-domain-containing-protein	gnl\|CDD\|337995	pfam11373, DUF3175, Protein of unknown function (DUF3175). This family of proteins with unknown function appears to be restricted to Proteobacteria.	2.81059e-44
NZ_CP008912.1\|WP_004523356.1\|2712444_2713752_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.09071e-89
NZ_CP008912.1\|WP_004529429.1\|2697298_2697487_+\|DUF3008-family-protein	gnl\|CDD\|314387	pfam11450, DUF3008, Protein of unknwon function (DUF3008). This is a bacterial family of uncharacterized proteins.	1.17203e-13
NZ_CP008912.1\|WP_004523345.1\|2701028_2702126_+\|Ku-protein	gnl\|CDD\|274290	TIGR02772, conserved_hypothetical_protein, Ku protein, prokaryotic. Members of this protein family are Ku proteins of non-homologous end joining (NHEJ) DNA repair in bacteria and in at least one member of the archaea (Archaeoglobus fulgidus). Most members are encoded by a gene adjacent to the gene for the DNA ligase that completes the repair. The NHEJ system is broadly but rather sparsely distributed, being present in about one fifth of the first 250 completed prokarytotic genomes. A few species (e.g. Archaeoglobus fulgidus and Bradyrhizobium japonicum) have multiple copies that appear to represent recent paralogous family expansion. [DNA metabolism, DNA replication, recombination, and repair].	9.37752e-123
NZ_CP008912.1\|WP_024431671.1\|2702193_2705697_+\|hypothetical-protein	gnl\|CDD\|235658	PRK05972, ligD, ATP-dependent DNA ligase; Reviewed.	4.0864e-145
NZ_CP008912.1\|WP_004546352.1\|2697531_2697693_+\|DUF1328-domain-containing-protein	gnl\|CDD\|227774	COG5487, COG5487, Small integral membrane protein [Function unknown].	0.000697993
NZ_CP008912.1\|WP_004529417.1\|2715780_2716548_+\|FadR-family-transcriptional-regulator	gnl\|CDD\|225097	COG2186, FadR, Transcriptional regulators [Transcription].	2.8891e-26
NZ_CP008912.1\|WP_024431669.1\|2716624_2718055_-\|amino-acid-permease	gnl\|CDD\|224038	COG1113, AnsP, Gamma-aminobutyrate permease and related permeases [Amino acid transport and metabolism].	1.79992e-151
NZ_CP008912.1\|WP_004529430.1\|2695755_2697231_+\|RNA-polymerase-factor-sigma-54	gnl\|CDD\|237109	PRK12469, PRK12469, RNA polymerase factor sigma-54; Provisional.	0
NZ_CP008912.1\|WP_024431673.1\|2697772_2698159_+\|DUF3022-domain-containing-protein	gnl\|CDD\|378603	pfam11226, DUF3022, Protein of unknown function (DUF3022). This family of proteins with unknown function appears to be restricted to Proteobacteria.	1.47128e-33
NZ_CP008912.1\|WP_004541992.1\|2694320_2695079_-\|DUF4397-domain-containing-protein	gnl\|CDD\|379570	pfam14344, DUF4397, Domain of unknown function (DUF4397). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, archaea and eukaryotes, and is approximately 120 amino acids in length.	3.42152e-26
NZ_CP008912.1\|WP_024431672.1\|2698294_2700421_+\|catalase-HPII	gnl\|CDD\|236886	PRK11249, katE, hydroperoxidase II; Provisional.	0
NZ_CP008912.1\|WP_004523355.1\|2711401_2712316_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	3.18176e-36
NZ_CP008912.1\|WP_004523338.1\|2693365_2694262_-\|manganese-catalase-family-protein	gnl\|CDD\|226076	COG3546, COG3546, Mn-containing catalase [Inorganic ion transport and metabolism].	7.58378e-109
NZ_CP008912.1\|WP_004523344.1\|2700443_2700947_+\|DUF421-domain-containing-protein	gnl\|CDD\|225205	COG2323, COG2323, Predicted membrane protein [Function unknown].	3.63901e-31
NZ_CP008912.1\|WP_004523357.1\|2713730_2715287_+\|M81-family-metallopeptidase	gnl\|CDD\|227763	COG5476, COG5476, Uncharacterized conserved protein [Function unknown].	9.05405e-144
NZ_CP008912.1\|WP_004523347.1\|2706305_2707625_-\|cation-transporter	gnl\|CDD\|223104	COG0025, NhaP, NhaP-type Na+/H+ and K+/H+ antiporters [Inorganic ion transport and metabolism].	3.18215e-34

>NZ_CP008912.1|WP_024431671.1|2702193_2705697_+|hypothetical-protein
MAGKLSVYRSRRRFGETPEPEGARRSPRRTKGTGRAGDESKRRARGDAAASSRGERAARRGRAQQPAPARGRSALHYVIQEHHARRLHYDFRLELDGTLKSWAIPKGPSLDPSVKRLAVHVEDHPLEYAAFEGEIPEGHYGAGSVIVWDRGAWTPAGGIAAARAGYRAGKLSFTLDGDKLHGGWALVRGRGLRDSGGKHEQWLLIKERDGDARDQADYDVLRARPGSVLGGARSARARRGRAAEPTERDAAAPKRARASVPKGRAEAKTSGRAPRTVSNGTAGAGKGASKRASKREGTNTGNGARSGKGSGKGAGEGAGEGVATSRRKRAAAPQSSDVDSADTDSPAARGLALPAGLAARFGLSGAKRAALPRTLRPQLATLVDAPPPGKDWLYEAKFDGYRVLIRIDRGAASCPIAVYTREGLDWSAKFAAQLDALARLPVDRGWLDGEAVVLDRAGVPDFQALQNALGAGRSNDVTLFLFDVPFLNGFDLRGVPLERRRALLAALVAAHASDVLRYSESLAFEAADLLTGACDAGLEGLIGKRRDGRYVEGRSRSWIKLKCRRRQEFVIGGYTEPAGRRSGFGALLLGVYARAPGDEGDEGERRTRGAAETRDERRRASHASRTSRTSRTSRAPDAGAARAPQARPLALRYVGRVGTGFGERTLRALARTLREHETGRMPFADVPRERSGTPVHWVKPVLVAECEFAEWTGDGIVRQASFVGLREDKPARTIVREQPQSMETEAMNEHADEHTDEHTDARAERRTGGRTRRKARDGGARDAPPLARHPKRGDAGSSARKGARDGEAGKRAAAGSSPSSSPSSSTSTSPSISASGRTRGGGRSASRDRAGDADEGANEDANDHAPRERAGAPKVAGVRVSHPGRVIDPHTGTRKLDLVEYWEWIAPWLLPHLKGRPVSLVRAPADIGGELFFQKHADKLEIPNVALHPGLDPGHEALITIDDVKGLVGAAQMGTIELHTWNAHVSNIEKPDRAVFDLDPDPSLDWRAVIEAAQLTRALLDELGLVSFCKTSGGKGLHVVVPLARHAGWDDVKAFAHAVARHMAATLPERFTATMGPRNRKGKIFVDYLRNNRGASTIAAYSVRARPGLGVSVPIAWDELPDTTGAAQWTLANLHERLDALKHDPWRAYAHVRQRVTAALRKRLSDG
>NZ_CP008912.1|WP_004523345.1|2701028_2702126_+|Ku-protein
MARMIWKGAISFGLVHVPVQLYPATRTVKPSFRLLDKRSLDPVGYRQINKRTGKAVPREDIVRGYEYEKERYVILTDEEIRAANPESTQTVDILTFVDDEAVSFLYLDTPYYLVPDRGGEKVYALLRDALKRSGKIGIALVVMRDRQHLGAVIPVGPLLALDTLRWQDELRPLAEIDAPAADAKKAGVSAREFEMAAKLIDDMSGDWSPDDYHDTFRDDILALVDRKVREGRVEQIAQEDTAPARRTADIVDLTELLKRSLGRAKGPRRAPDGGANERGDSGEGGEGGGRGGGELARELERSVGGTRGGRGGGRKKAEPHAPPRKRAQAAATKRGKQAKPRDGASRASARTAAKKPAAARKRRAA
>NZ_CP008912.1|WP_004523344.1|2700443_2700947_+|DUF421-domain-containing-protein
MDAVLAFFAPLFGSGAPLGAPQMAARAAAAFFIALALIRIAGRRSFGQRSPFDYVVGILLGATLSRAIVGVSPFWPTVAASLAIVLLHRALAWACVRSARLERFFVGAQRELYRNGRFDEAQMSAALITMTDIYESVRQKTGECDLSGVAAAILERNGHVSIIRRKS
>NZ_CP008912.1|WP_024431672.1|2698294_2700421_+|catalase-HPII
MADSDRNAPHETPRAAQPDDARADRKSQDLEPYRSKPQGEALRTNQGVRIADDQNTLRAGARGPSLLEDFIMREKITHFDHERIPERVVHARGSAAHGVFRVYESMAEYTKAAFLQDPAKETPVYVRFSTVQGPRGSADTVRDVRGFAVKFYTDEGNYDLVGNNMPVFFIQDAIKFPDFVHAVKPEAPNEMPTGASAHDTFWDFVSLVPESAHMVAWLMSDRAIPRSFRMMEGFGVHTFRFVNAQGVARFVKLHWRPVLGSYSLLWDEAQKIAGHDPDFHRRDLWEAIERGDYPEYELGVQIIEARDQHAFGFDLLDPTKLIPEETVPVKLIGKMTLNRNPDNFFAETEQVAFHPGHLVPGIDFTDDPLLQGRLFSYTDTQLSRLGGPNFHELPINRPVCPFANLQRDAMHRQTIDVGQASYEPNSLNGGWPKETDPAGRDGGFDSYPEAVEGAKVRVRSGSFADHFSQAALFYQSMSDVERRHIRDAYRFELGKVTRPEIRARVVDEILARFDAGLAAEVAEGLGLPPPPASAPAIVAQPLSPALSLLTRGKRSVRSRKVALVATPGADTRLIERVRRALTDARAVPVLVAPTLARIGELTPEATLAGMPSVMFDAVFVCGGDGDGRDLVHSSDARHFLQEAFKHLKAIAAVGSGRQLLGAAHLPEQGDGVCVGHAADLDQVVAKFFDALSEHRVWSREPLAQGVPA
>NZ_CP008912.1|WP_024431673.1|2697772_2698159_+|DUF3022-domain-containing-protein
MTLPTDLPQRLVEIEHLLSDCFASPSTTVLHVDDSSGHLTIQVSWVAARAASSLLEARCALNLVFEPNVLRRYGRLDAAARARVRERLAALARQTVDAARPVEGSEADACNATLPVTDALLDDALRGG
>NZ_CP008912.1|WP_004546352.1|2697531_2697693_+|DUF1328-domain-containing-protein
MLRYALVFFIIAIIAAVLGFGGIAAGAAEIAKILFYIFVVIFLVTLVLGVARR
>NZ_CP008912.1|WP_004529429.1|2697298_2697487_+|DUF3008-family-protein
MPAKSQAQQRAAGAALSAKRGRTKASELKRPSKSMYSSMSEKELEKLAGTKTRDKPKHKSKS
>NZ_CP008912.1|WP_004529430.1|2695755_2697231_+|RNA-polymerase-factor-sigma-54
MSATLALQMRQHLALTPRLQQSLRLLQLSSLEFQQELRQALDTNPFLEDVQSPDDDAAEAAPKPGETPAADANARADDGYAERDEGPFATDASPPAGQDVPLTAELSARGSSRRSDDASDLEPGDWMTAEPTLHEHLHDALRLCQLTRRDRTLARMIIDALDDDGYLRQALPELAAAADPLLHPAEQELLVALRLVQSLDQPGIGARTLSECLLLQLDAMPADTPGVECAKEIAAHHLERLARRETAEMQRRIGCDTHTLRIACTLVRRLDPRPGNQYGSTAGNYVVPDVIVRQVRNDWLVTINPAVMPRARIHRRYAELFAQSSGSNQSPLGQQLQEARWLIRNAQKRFDTIRRVGECIVERQRDFFRYGEIALKPLVLRDIADELGLHESTISRATGNKYMSTPHGTFEFKHFFPRKLEAAGKGACSAAVARVLIRDMIAAEQAIDPLSDVALAQRLAGRGIVLARRTVTKYRQAMKIPPAELRRRAPL
>NZ_CP008912.1|WP_004541992.1|2694320_2695079_-|DUF4397-domain-containing-protein
MKPIRTVAALISAVALVAACGGDDTGTELGISNPQARFINAVPAGPSLDYYLNAQANATGIAYKGVTRYRSVGSGSQTASYDVTGTSVTIASQTFNAANGHHYTTIAIPSTSTPISVIDDPFAKGLLSDQARVRGFNASPNAQNVDIYVVPPGTNIAAQSPTLAGAAYQNAVPASGQDSIYLSGGTYQVIVTLPGSKTPILTTPPVSIANNADWLLLTIPAGGVADVVPNDIHVLVAQGNDADTSAQELGPQ
>NZ_CP008912.1|WP_004523338.1|2693365_2694262_-|manganese-catalase-family-protein
MFFHNKRLQYTVRVAETNPGLANLLLEQFGGPQGELAAAMRYFTQAIAEEDAGRKDMLYDIATEELSHLEIIGSIVAMLNRGAKGELAEAVDEQAQLYRKLNGGGNDSHVTQLLYGAGAPLVNSGAVPWTAAYVDTIGEPTADLRSNIAAEARAKIIYERLINVTDDPGIRDALGFLMTREVSHQKSFEKALYSITPNFPPGKLPAVPEYADLYYAMSDGGGARRKSPWNDGHDLRLVEHPPVPADGGDGKATVALDGDESTTLEAMRHRLKSDPSSDPTTGADLGSGGPDKPRDFPT
>NZ_CP008912.1|WP_004523347.1|2706305_2707625_-|cation-transporter
MHETLWYLIVGGVLMLMGIVTSTLKHLPCSAAMIYLLLGYLLGPPGIGLLRIDIERDAPLLRMVTEIALLVSLFAIGLRLRVPLRDRLWAVPWRLGVVAMALTVPLLAAFGALALGLAWGPALLLAAMLAPTDPVLAHDVQVRDPNDVDLTRFALSGEGGLNDGIALPFALAGLALCGNRDVLGGASPASLAALGASAWGVAGGLAIGGLLGWCTMHTVAWLRTRHAQALGLEGFLALGLIELSYGAARLAHTFGFLAVFAAGVAMRRAEHRASGGRRPREVIGTIDSEDVVATEKHPDKARAYMAESVLGFTIELERIAEAIVMTMVGNVLADFHPAAFGWRAFAAVVALFCFARPLAVALSLAGSGATRTQRRLMGWFGIRGIGSFYYLVFALERGPIDAVRPIAPLVLAAVAASVIVHGMSATPLMNWYHRLRASR
>NZ_CP008912.1|WP_004523348.1|2707671_2708049_-|DUF3175-domain-containing-protein
MATRKTSPRKQAPRKTARRPAASGRKRARAAQEKSGRYWSRDVTEHSDALDLEHDVFKSDNPEAIAQSLKRSALDSTRRKANPFQSAMSMLNFYVNRAGRNLPKTRRTTLERAKKKLREAFGRKP
>NZ_CP008912.1|WP_004536942.1|2708056_2708350_-|hypothetical-protein
MRIFDAIVLLLSRAAGRRARSDHTVGSPARARAARRACPTRRARDGREGRACGAPHRSPTPASRTRETFEIRRPERFGVGDVEPGSSHAPEAGGVKL
>NZ_CP008912.1|WP_153260203.1|2708556_2709006_+|hypothetical-protein
MLKIVLIARVIERVESNVRFDARIGKDGANENARSVRRWLTPRLRPPFRWPPAGPPAFAGGAHLSKKTSISLRRKCANSRFGDNPVDRFECALSTAGTRPPVLKRSASVSPVRIEIESRKKQKRPIRAARTRAGESAHGANEDEKNGHA
>NZ_CP008912.1|WP_024431670.1|2708983_2711110_+|hypothetical-protein
MKKTDTREKNAAAKPDSPSNIGECIRLPCSGQFYVLERALSKPRVSGAFDGIEAALDAQMAKFAERNAAAARAFAQLRVRCVREQRAALQIDGVTVGATLSSLTRSFLRPPLLAPEADVAEARFAHVLLVELTLRPVGKDEVDAYLYVYRELADDPLDHGLREHCTEIETLAFVEPFVQPDATRIERMSMRMMAASRGEVRRKTIDAYDVGATTSSLGLHRTIAGTMTLAVPHGGGTRRFDVSPHRQRVRAGTSRLPLDKVIHWASERAVGFSRSSTATATSSAFLSQFARPIARLLDKTPSSVLIERRAFAEAIDEYARLTGLAWVAGRGAPQAWKTVDDVLDALGDTFVVDGQALDGSGAPLDRSRPFAEVCYRSRAPSIPGLKSTDAVRLKVGSRTCKIVLPSAVGHMGGAKDAQRRGLGEILNRSRAFRAVFDGGRVLFCSEGAYGSDDLALATTQLASIFRSVAALGDVHSEKGKTHEHATSFQAQSCFHVIETERALAHPDSALICDDSTVEWADYIELDSAAPRIRWMHAKVQKVASEAAKRARQDKTTLPPHVSPTVAVRHSPSLSASDLEEVVGQAIKNLARLRLRTSDPEFSGRHNTWMSETCALPSKSRIARLRRLGGLRRKADIEARFDAAAIDPHAVYEVAIVVPNYSKTQVESELAKIATGDAQPSVLQMFWLLSGFMHACLEVGAKPLVFMHA
>NZ_CP008912.1|WP_004523355.1|2711401_2712316_-|LysR-family-transcriptional-regulator
MDQSFQVNLNRLRYFHAILEHGSIRAAAERLNTAPSVVSRQLQLLESEIGAPLFERRQHGMIATEAATLLVEYTHACRIGLEQFHESLHGELRGRVEIALTVGYVEDLMDSVITGFLHRHPHVAVELNVRTADGVVDDVLRKRAHIGLTYNPSLPPEIRECLSVAHPTFLAVAPDHPLAKRGEPLELRDAVRYPLALMPAPYYGVGQIVHTVAHAENIPLAPRLVTNSVPAMRRFVRSGNGVAFLTRLLVEDDLERGEIVALRMRNPLFNSPCGKVLVHNERALPRAANEILARIVRDLPSFKS
>NZ_CP008912.1|WP_004523356.1|2712444_2713752_+|MFS-transporter
MREQNASGNTRSRIYRKVDIRILGFLAVCYITAYIDRINISFAKLAMQTDLGWSEAVYGLGAGIFFLGYMAFEVPSNLWLTRIGARLTLSRIMVLWGLTSAAMMFATDVTTFYVLRFLLGVFEAGFSPGMLFCLTRWYPQARMARAMAMLLCAGPVGAVIGGPVSTLIMTQLAGAHGLAGWQWLFVLEGLPAVLLGIVLFFTLSERPADARWLSENEKAILLSELAAAPRAASRHTAFRGVLKDPRIYAMAFSYFAIICGLYAVSFWLPTLLRGAGVKNLLHVGALSALPYLAAIVAMQVIGRRSDRRGERRVHSALALLLSAAALTGTVLAGDRFVVAMVALVAATALMYSSYAVFWAIPADYLKGDAAAGGIALINSIGLFGGFVSPTIIGWIKTATGSLQAGLMAMVALFVAGAIVLLANRVDANKWSAVAS
>NZ_CP008912.1|WP_004523357.1|2713730_2715287_+|M81-family-metallopeptidase
MERRRIMKILVAGFRHESNTFAPSKATYASFAADGGRYPLSRGAEIGRLKRMNLPVAGALAALADAGHVALPAVWADATPSGRVESVAFERIAGEIVDAAKRYDADGVYVDLHGAMATERYDDGEGELLRRLRETVGARVPIVASLDLHANVTQRMLDSADGLVTYRTYPHVDMADTGRRAVALLDTLLGRRGRHRHFRSARRVPFLIPVNAMCTSLEPSKSLFRLLERLETGAVRSLSFAPGFPAADFPECGPTIWGYGADPVQLARAVDALYEHVVSTEAQWSVPFMSADDAVTEAIRIARGADKPVVIADTQDNPGAGGGSNTTGLLRALVRHRAPDAALGLFFDPAAACAAHAAGRGATVEITLGADSGLPFTGTFRVESLSNGRCHCNGPMLKGATFELGPTACLRIGDVRVVVTSARVQMTDRSFYRIAGIAPETMKILVNKSSVHFRADFDAIADCVLIAKAGGWMAADPADLRWTSLADGIRTSPCGSPFFGCGGRRAPHADGIAGEMRI
>NZ_CP008912.1|WP_004529417.1|2715780_2716548_+|FadR-family-transcriptional-regulator
MNSLDSNHLLNPARAPARPLGDAAERRSLKASPRVQRVLDELVTRIVDGEYTSGLLPPQDVLARELGVPRSVMREVTRMLTARRMLHARTKAGTRLTPRSEWRLFDDHVMQWRMRIASDTDFLLDVAAMCDLIEPEAAAQVALHSDDTQRRAVRAAHAALRDALEPDALRRALELLHASIVEASRNQFIRQMAEVARAGVMAIDLDAATLQERNEAIRDAAAKLVAAIDGRDADGARTAMIALRAAVNETSLDPA
>NZ_CP008912.1|WP_024431669.1|2716624_2718055_-|amino-acid-permease
MSSERQFQAIAQREGGLRRTLSARQMTMIAIGGAIGTGLFLGSGFAIGFAGPSVLISYAIGALISLLLMGCLAEMTVAHPTSGSFGAHAEHYLGPWAGFLVRYAYWACIVLAVGTEVTAVALYMKYWLPAVPGWVWIAGFSAVLVFVNALSVDVFGSVEYGFSVVKIAAIVAFIAIGGYVVFVDPSLVADPNAGAPGLRHYFEHGGVFPKGLWGTWVAVIVSIFSYLSIEMIAVAAGEAQDPERAVTRAFRSTVIRLVLFYLVTLALMLAIVPWTAAGRDESPFVKVMIAIHLPGAAGVINFVVLIAALSAMNSQLYITTRMMFSLACAGHAPRGLGRLTRRGVPLNALLLSTAGIAIATLVSVAYPDASFTIMMAISMFGAMFTWTMIFVTHYFFRRKRAAQGLPPPRFRMPGFPLATLAGAALMLAIMATTYFTPEFHMTLVFGAPFLAALSVLYFARYRRRPHALARAESQPR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP008912_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008912_3

3031493-3031585

Orphan

Consensus_repeat	Method
TCGCCGCCGCGCGCGACGACGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008912_3

>merge|NZ_CP008912|3|3031493-3031585|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGCTGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGATCGCCGCCGCGCGCGCCGACGCGC

>NZ_CP008912|3|2|3031493-3031585|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGC	TGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGA
TCGCCGCCGCGCGCGCCGACGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008912.1\|WP_004187193.1\|3031025_3031274_+\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP008912.1\|WP_044363669.1\|3036210_3036714_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_004188221.1\|3029086_3029542_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP008912.1\|WP_004530244.1\|3039748_3041584_-\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP008912.1\|WP_024431218.1\|3032020_3034033_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987
NZ_CP008912.1\|WP_004533337.1\|3034029_3034878_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP008912.1\|WP_004524990.1\|3037821_3039387_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP008912.1\|WP_004187346.1\|3030327_3031029_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383
NZ_CP008912.1\|WP_004529184.1\|3022707_3023886_-\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP008912.1\|WP_024431219.1\|3027450_3029097_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP008912.1\|WP_004524985.1\|3030022_3030331_+\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP008912.1\|WP_004530245.1\|3041733_3042858_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP008912.1\|WP_004198321.1\|3035108_3036134_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP008912.1\|WP_004529182.1\|3029538_3030030_+\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP008912.1\|WP_004524980.1\|3023882_3025286_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180
NZ_CP008912.1\|WP_024431635.1\|3042860_3046085_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP008912.1\|WP_004524981.1\|3027221_3027479_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008912.1\|WP_004188840.1\|3025296_3027090_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|213656
NZ_CP008912.1\|WP_004524995.1\|3046081_3047155_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP008912.1\|WP_004539325.1\|3036771_3037281_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP008912.1\|WP_004187193.1\|3031025_3031274_+\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37
NZ_CP008912.1\|WP_004188221.1\|3029086_3029542_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	4.44077e-63
NZ_CP008912.1\|WP_004530244.1\|3039748_3041584_-\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	6.14575e-132
NZ_CP008912.1\|WP_024431218.1\|3032020_3034033_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0
NZ_CP008912.1\|WP_004533337.1\|3034029_3034878_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	4.46992e-34
NZ_CP008912.1\|WP_004524990.1\|3037821_3039387_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79
NZ_CP008912.1\|WP_004187346.1\|3030327_3031029_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122
NZ_CP008912.1\|WP_024431219.1\|3027450_3029097_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP008912.1\|WP_004524985.1\|3030022_3030331_+\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	4.12229e-10
NZ_CP008912.1\|WP_004530245.1\|3041733_3042858_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	4.38049e-26
NZ_CP008912.1\|WP_004198321.1\|3035108_3036134_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP008912.1\|WP_004529182.1\|3029538_3030030_+\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	6.86601e-17
NZ_CP008912.1\|WP_004524980.1\|3023882_3025286_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NZ_CP008912.1\|WP_024431635.1\|3042860_3046085_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.09864e-92
NZ_CP008912.1\|WP_004529184.1\|3022707_3023886_-\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP008912.1\|WP_004188840.1\|3025296_3027090_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	6.3979e-179
NZ_CP008912.1\|WP_004524995.1\|3046081_3047155_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.83012e-39

>NZ_CP008912.1|WP_004187193.1|3031025_3031274_+|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP008912.1|WP_004187346.1|3030327_3031029_+|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP008912.1|WP_004524985.1|3030022_3030331_+|membrane-protein
MIEMWETARASFDGIAAAIGLALGFVAGACHFVSLGWNSRLFVAGRAGVALALQLARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP008912.1|WP_004529182.1|3029538_3030030_+|AtpZ/AtpI-family-protein
MMKRRPPEVKREARDDAARGDARHAGAGAAPDDPRGAARRDPPPGSRAARGGATHPAARAAEPAAPKPAADRVERAAHTAAARAARGARDPEPSLGRRLAQIGVLGWTIVAPTLAALALGRWLDRMFATRVFFSAPLLMLGAALGLWLAWRWMKAQQHGDRDD
>NZ_CP008912.1|WP_004188221.1|3029086_3029542_+|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWRTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP008912.1|WP_024431219.1|3027450_3029097_+|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDARDEGAGRVVAVRGAVIDVAFDGGALPALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAVASGAGPGTTSGTTSGTTSGTTSGTTSGTTSDPASGSAEPQGARHGR
>NZ_CP008912.1|WP_004524981.1|3027221_3027479_-|hypothetical-protein
MPFVACGSATVAPVWLVRRWLHHNGARRPPADLGQETGNRQTKRGIAQSETIDASASGADTVRAASIVDSNQIPQTYAWLQWPCQ
>NZ_CP008912.1|WP_004188840.1|3025296_3027090_-|alpha/beta-fold-hydrolase
MDTRHAPESGAPDAPLPAHPPASYAPESPYRIFDLAKEASVAKLTSGLSPASLQLALADWLIHLAAAPGKRAELATLALRHAALLGQYLLEAATGRTPAAPAQPSPGDRRFRAGAWQLEPYRFWHQSFLLAEQWWRAATRDVPGVSPHHEDVVAFSARQMLDTFAPANYVATNPEIAQRTALTGGANLAQGVWNYLDDVRRLITKQPPAGAEQFELGRNLATTPGRVVFRNHLIELLQYSPTTPDVYAQPVLIVPAWIMKYYILDLSAHNSLIRYLVGEGHTVFCISWRNVDASDRDLSLDDYRKLGVMDALDTIGAIVPGEKIHATGYCLGGTLLSIAAAAMANTGDDRLASITLLAAQTDFAEPGELQLFIDDSEIHFLESMMWERGYLGAHQMAGSFQLLMSNDLIWSRVIHDYLLGERTPMIDLMAWNADSTRMPYRMHSEYLRHLFLDNDLATNRYVIDGQTVSVHNIRAPFFVVGTEHDHIAPWRSVYKIHYLSGSDVTFVLTAGGHNAGIVSEPGHAKRHYRMKMTAAAAPSISPDEWLAGATDFEGSWWPAWHAWLARHSSPQRVAPPPLGKPGAHTLGDAPGTYVFQK
>NZ_CP008912.1|WP_004524980.1|3023882_3025286_-|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP008912.1|WP_004529184.1|3022707_3023886_-|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGGEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHLRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKVVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA
>NZ_CP008912.1|WP_024431218.1|3032020_3034033_+|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSREVSPEASREVSREVSREVSHEADRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASVSRPRPDARGDAARTAPSPQDGADANVNAAANVDAEAEARHKR
>NZ_CP008912.1|WP_004533337.1|3034029_3034878_+|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGDTAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPEPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEVTERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP008912.1|WP_004198321.1|3035108_3036134_+|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGATFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP008912.1|WP_044363669.1|3036210_3036714_+|hypothetical-protein
MRGAGRASPSRARRYENVSKEPNTHREARAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDMHPGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTELIESVAAALRAGEVVRMRDSPDEYPGGHAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP008912.1|WP_004539325.1|3036771_3037281_-|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNSELLMMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP008912.1|WP_004524990.1|3037821_3039387_+|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP008912.1|WP_004530244.1|3039748_3041584_-|response-regulator
MHVEVFAQHPSCPGWHGEMARRIRAFDWSATELGPLERWPASLVAAVRTVLASPVPLVMLWGASGYMLYNDAYAAFAGGRHPYLLGQPVELGWPEVADFNRNVMRTCLAGGALSYRDKALVLLRNGRPEEVWMDLYYSPLAGDDGAPAGVLAVVVETTERVLAARHRDRAKAALHETNAELRRLTETLEQRVADAITERASIEEQLRQAQKMEAIGSLTGGIAHDFNNVLQVVSSNLQMLSAELGEDARAQRRIASAANAVARGAQLASHLLAFARRQPLAPAVLEPRGLIDGMREMLHRALGESVHVDADLRDDVWNVLADRHQFENALLNLAINARDAMRGEGTLKITACNIVLEAGRHARRNGLPPGEYVAFDIADNGVGMTPDILERVFEPFFTTKPDGQGTGLGLSMVFGFVKQSGGHTSIESAPGRGTTVRLLLPRCREAPAGEPAAQRRLPAEGGRETILVVEDDADVRLAVVDMLAQLGYKVITASDGEAGLLALESGAPIDLLFTDVIMPGRIKGGELARRAAQRVPPVPVLFTSGYTRDEIFHAGRLDPGVMLLGKPYRRDELAHKVRSVLDAHASARRARGARHAQADPRAKTAAARVQR
>NZ_CP008912.1|WP_004530245.1|3041733_3042858_-|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMDAGDFTFVLDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP008912.1|WP_024431635.1|3042860_3046085_-|ATP-binding-cassette-domain-containing-protein
MSAPSVVRFSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQEAQGGAGGRPGAGERAAGESLAGRGAATDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGSEVASEAGLAASAESGSERGVAHGAERAREPAADAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPPSHAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRYFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHELYSQFWPLAACVPVILGATILLLKKQER
>NZ_CP008912.1|WP_004524995.1|3046081_3047155_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGKVLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP008912_1	1.6\|2403802\|24\|NZ_CP008912\|CRT	2403802-2403825	24	NZ_CP008912.1	2403550-2403573	2	0.917
NZ_CP008912_1	1.10\|2403970\|24\|NZ_CP008912\|CRT	2403970-2403993	24	NZ_CP008912.1	2403550-2403573	2	0.917

1. spacer 1.6|2403802|24|NZ_CP008912|CRT matches to position: 2403550-2403573, mismatch: 2, identity: 0.917

ctgcccgtcgcttgcgaaccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.*********.******

2. spacer 1.10|2403970|24|NZ_CP008912|CRT matches to position: 2403550-2403573, mismatch: 2, identity: 0.917

ctgcccgtcgcttgcgaaccttgg	CRISPR spacer
ctgcccgccgcttgcgagccttgg	Protospacer
*******.*********.******

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP008912_1	1.15\|2404180\|24\|NZ_CP008912\|CRT	2404180-2404203	24	NZ_AP022593	Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence	3366341-3366364	2	0.917
NZ_CP008912_1	1.9\|2403928\|24\|NZ_CP008912\|CRT	2403928-2403951	24	MN693956	Marine virus AFVG_250M695, complete genome	26524-26547	3	0.875
NZ_CP008912_1	1.15\|2404180\|24\|NZ_CP008912\|CRT	2404180-2404203	24	NZ_CP054618	Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence	194448-194471	3	0.875
NZ_CP008912_1	1.15\|2404180\|24\|NZ_CP008912\|CRT	2404180-2404203	24	NZ_CP025552	Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence	169321-169344	3	0.875
NZ_CP008912_1	1.1\|2403592\|24\|NZ_CP008912\|CRT	2403592-2403615	24	NC_012725	Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence	15063-15086	4	0.833
NZ_CP008912_1	1.1\|2403592\|24\|NZ_CP008912\|CRT	2403592-2403615	24	NZ_CP035902	Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence	58203-58226	4	0.833
NZ_CP008912_1	1.3\|2403676\|24\|NZ_CP008912\|CRT	2403676-2403699	24	NZ_CP020331	Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence	210775-210798	4	0.833
NZ_CP008912_1	1.12\|2404054\|24\|NZ_CP008912\|CRT	2404054-2404077	24	NZ_CP021031	Rhizobium sp. NXC14 plasmid pRspNXC14a, complete sequence	88776-88799	4	0.833
NZ_CP008912_1	1.12\|2404054\|24\|NZ_CP008912\|CRT	2404054-2404077	24	NZ_CP020910	Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence	69717-69740	4	0.833
NZ_CP008912_1	1.12\|2404054\|24\|NZ_CP008912\|CRT	2404054-2404077	24	NZ_CP020910	Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence	90917-90940	4	0.833
NZ_CP008912_1	1.2\|2403634\|24\|NZ_CP008912\|CRT	2403634-2403657	24	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	362719-362742	5	0.792
NZ_CP008912_1	1.4\|2403718\|24\|NZ_CP008912\|CRT	2403718-2403741	24	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	362719-362742	5	0.792
NZ_CP008912_1	1.13\|2404096\|24\|NZ_CP008912\|CRT	2404096-2404119	24	NZ_CP024936	Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence	362719-362742	5	0.792
NZ_CP008912_1	1.15\|2404180\|24\|NZ_CP008912\|CRT	2404180-2404203	24	NZ_CP016453	Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence	640343-640366	5	0.792
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356351-356417	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356358-356424	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356365-356431	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356372-356438	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356379-356445	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356386-356452	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356393-356459	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356400-356466	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356407-356473	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356414-356480	9	0.866
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356421-356487	14	0.791
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356344-356410	16	0.761
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356428-356494	21	0.687
NZ_CP008912_2	2.1\|2705777\|67\|NZ_CP008912\|CRISPRCasFinder	2705777-2705843	67	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	356337-356403	23	0.657

1. spacer 1.15|2404180|24|NZ_CP008912|CRT matches to NZ_AP022593 (Mycolicibacterium arabiense strain JCM 18538 plasmid pJCM18538, complete sequence) position: , mismatch: 2, identity: 0.917

ctgcccgtcgcctgcgcaccgtta	CRISPR spacer
ctgcccgtcgccggcgcaccgttc	Protospacer
************ **********

2. spacer 1.9|2403928|24|NZ_CP008912|CRT matches to MN693956 (Marine virus AFVG_250M695, complete genome) position: , mismatch: 3, identity: 0.875

tcacccgacgcggtagcatcctgc	CRISPR spacer
acacccgacgcggtagcttgctgc	Protospacer
 **************** * ****

3. spacer 1.15|2404180|24|NZ_CP008912|CRT matches to NZ_CP054618 (Azospirillum oryzae strain KACC 14407 plasmid unnamed4, complete sequence) position: , mismatch: 3, identity: 0.875

ctgcccgtcgcctgcgcaccgtta	CRISPR spacer
ctggccgtcgcctgcgcgccgttc	Protospacer
*** *************.*****

4. spacer 1.15|2404180|24|NZ_CP008912|CRT matches to NZ_CP025552 (Streptomyces rimosus strain WT5260 plasmid unnamed, complete sequence) position: , mismatch: 3, identity: 0.875

ctgcccgtcgcctgcgcaccgtta	CRISPR spacer
ctgcccgtcgtctgcgtaccgttg	Protospacer
**********.*****.******.

5. spacer 1.1|2403592|24|NZ_CP008912|CRT matches to NC_012725 (Burkholderia glumae BGR1 plasmid bglu_4p, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

6. spacer 1.1|2403592|24|NZ_CP008912|CRT matches to NZ_CP035902 (Burkholderia glumae strain 257sh-1 plasmid plas1, complete sequence) position: , mismatch: 4, identity: 0.833

tcacccgacgcggtggcatcctgc	CRISPR spacer
tcacccgacgcggtggcacccgtt	Protospacer
******************.**  .

7. spacer 1.3|2403676|24|NZ_CP008912|CRT matches to NZ_CP020331 (Martelella mediterranea DSM 17316 strain MACL11 plasmid pMM593, complete sequence) position: , mismatch: 4, identity: 0.833

ttccccgtcgcttgcgaaccttgg	CRISPR spacer
ggccccgacgcttgcgaaccttgc	Protospacer
  ***** ***************

8. spacer 1.12|2404054|24|NZ_CP008912|CRT matches to NZ_CP021031 (Rhizobium sp. NXC14 plasmid pRspNXC14a, complete sequence) position: , mismatch: 4, identity: 0.833

ctacccgtcgcttgcgaaccttgg	CRISPR spacer
tgacccgtcgcttgggaaccttgt	Protospacer
. ************ ********

9. spacer 1.12|2404054|24|NZ_CP008912|CRT matches to NZ_CP020910 (Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence) position: , mismatch: 4, identity: 0.833

ctacccgtcgcttgcgaaccttgg	CRISPR spacer
tgacccgtcgcttgggaaccttgt	Protospacer
. ************ ********

10. spacer 1.12|2404054|24|NZ_CP008912|CRT matches to NZ_CP020910 (Rhizobium etli strain NXC12 plasmid pRetNXC12d, complete sequence) position: , mismatch: 4, identity: 0.833

ctacccgtcgcttgcgaaccttgg	CRISPR spacer
tgacccgtcgcttgggaaccttgt	Protospacer
. ************ ********

11. spacer 1.2|2403634|24|NZ_CP008912|CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 5, identity: 0.792

gtgcccgacgcggtggcatcctga	CRISPR spacer
ttgcccgacgcggtggcatcggtg	Protospacer
 *******************   .

12. spacer 1.4|2403718|24|NZ_CP008912|CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 5, identity: 0.792

gtgcccgacgcggtggcatcctga	CRISPR spacer
ttgcccgacgcggtggcatcggtg	Protospacer
 *******************   .

13. spacer 1.13|2404096|24|NZ_CP008912|CRT matches to NZ_CP024936 (Paraburkholderia graminis strain PHS1 plasmid pPHS1_P, complete sequence) position: , mismatch: 5, identity: 0.792

gtgcccgacgcggtggcatcctga	CRISPR spacer
ttgcccgacgcggtggcatcggtg	Protospacer
 *******************   .

14. spacer 1.15|2404180|24|NZ_CP008912|CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 5, identity: 0.792

ctgcccgtcgcctgcgcaccgtta	CRISPR spacer
tggcccgtcgcctgcgcaccggct	Protospacer
. ******************* .

15. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
tagcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
..**********************************************************

16. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

17. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

18. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

19. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

20. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

21. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

22. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

23. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

24. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.866

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
  **********************************************************

25. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 14, identity: 0.791

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
-------atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
       *****************************************************

26. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 16, identity: 0.761

-------cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
tgtttattagcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
       ..***************************************************

27. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 21, identity: 0.687

cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
--------------atgcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
              **********************************************

28. spacer 2.1|2705777|67|NZ_CP008912|CRISPRCasFinder matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 23, identity: 0.657

--------------cggcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	CRISPR spacer
ttcctcttgtttattagcgagatgcgagatgcgagatgcgagatgcgagatgcgagatgc	Protospacer
              ..********************************************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

827336 : 930077

Tupanvirus(50.0%)

transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004533078.1\|827336_827702_+\|transposase	transposase	NA	NA	NA	NA
WP_158332752.1\|827783_828308_+	hypothetical protein	NA	NA	NA	NA
WP_004528491.1\|828850_829534_-	Fe2+-dependent dioxygenase	Q5GQB0	Synechococcus_phage	3.2e-16	31.0
WP_004551718.1\|829530_830277_-	sel1 repeat family protein	NA	NA	NA	NA
WP_024431068.1\|830278_832525_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_004528489.1\|832948_834244_-	aspartate carbamoyltransferase	Q84489	Paramecium_bursaria_Chlorella_virus	6.3e-45	38.0
WP_004528487.1\|834521_834656_+	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_004539526.1\|834765_835233_-	cupin domain-containing protein	NA	NA	NA	NA
WP_004539525.1\|835217_835667_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_024431069.1\|835898_837380_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_004537352.1\|837383_837653_+	hypothetical protein	NA	NA	NA	NA
WP_004528481.1\|838001_838229_+	hypothetical protein	NA	NA	NA	NA
WP_004553410.1\|838325_839024_+	hypothetical protein	NA	NA	NA	NA
WP_024431070.1\|839039_848534_+	type I polyketide synthase	A0A2K9KZV5	Tupanvirus	2.3e-35	24.7
WP_024431071.1\|848559_849621_+	hypothetical protein	NA	NA	NA	NA
WP_024431072.1\|849617_853637_+	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	5.1e-53	27.0
WP_024431073.1\|853654_858358_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	7.1e-46	20.8
WP_004532400.1\|858354_859674_+	hypothetical protein	NA	NA	NA	NA
WP_004537369.1\|859670_860735_+	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_004536596.1\|860746_861694_+	MsnO8 family LLM class oxidoreductase	NA	NA	NA	NA
WP_024431074.1\|861690_863508_+	fatty acyl-AMP ligase	NA	NA	NA	NA
WP_004528471.1\|863504_863777_+	acyl carrier protein	NA	NA	NA	NA
WP_154218330.1\|864264_864501_+	hypothetical protein	NA	NA	NA	NA
WP_004533073.1\|864585_865455_-	hypothetical protein	NA	NA	NA	NA
WP_009972528.1\|866231_866627_+	hypothetical protein	NA	NA	NA	NA
WP_158332757.1\|866707_867136_-\|transposase	transposase	NA	NA	NA	NA
WP_004539515.1\|867425_868508_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_024431076.1\|868504_875881_-	toxin	NA	NA	NA	NA
WP_004532472.1\|875921_883334_-	hypothetical protein	NA	NA	NA	NA
WP_004528459.1\|883569_888156_-	insecticidal toxin complex	NA	NA	NA	NA
WP_076849357.1\|890530_890785_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004528453.1\|891184_891820_+	hypothetical protein	NA	NA	NA	NA
WP_004528452.1\|891963_892392_+	hypothetical protein	NA	NA	NA	NA
WP_076867424.1\|893359_893446_-	hypothetical protein	NA	NA	NA	NA
WP_009972538.1\|893602_894244_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_085962479.1\|894459_895570_+\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_123875343.1\|895620_895881_-	hypothetical protein	NA	NA	NA	NA
WP_004528446.1\|896697_896892_+	hypothetical protein	NA	NA	NA	NA
WP_004539190.1\|896955_897129_+	hypothetical protein	NA	NA	NA	NA
WP_079999965.1\|897492_898446_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_144399933.1\|899400_900521_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	1.4e-48	39.1
WP_079999963.1\|900679_900958_+	hypothetical protein	NA	NA	NA	NA
WP_009972582.1\|901734_902190_-	transcriptional regulator	NA	NA	NA	NA
WP_024431120.1\|904077_911634_+	hypothetical protein	NA	NA	NA	NA
WP_029670944.1\|911657_914627_+	RHS repeat protein	NA	NA	NA	NA
WP_004528436.1\|914714_919172_+	virulence protein	NA	NA	NA	NA
WP_004528435.1\|919227_922086_+	RHS repeat protein	NA	NA	NA	NA
WP_024431469.1\|922315_929569_+	toxin	NA	NA	NA	NA
WP_009971876.1\|929816_930077_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

1033219 : 1103329

Burkholderia_virus(66.67%)

terminase,capsid,holin,tail,head,plate,protease,portal

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_024431540.1\|1033219_1035220_+\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	6.4e-105	46.2
WP_004531808.1\|1035365_1035974_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_004553377.1\|1036282_1037773_-	arginine-ornithine antiporter	NA	NA	NA	NA
WP_009934040.1\|1038495_1039332_+	EamA family transporter	NA	NA	NA	NA
WP_004528324.1\|1039527_1040676_-	DUF971 domain-containing protein	NA	NA	NA	NA
WP_017844165.1\|1040732_1041527_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_004528321.1\|1041940_1042120_+	hypothetical protein	NA	NA	NA	NA
WP_004528320.1\|1042112_1042589_+	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	1.6e-14	42.9
WP_004528319.1\|1042585_1043041_+	hypothetical protein	NA	NA	NA	NA
WP_004528318.1\|1043042_1044032_+	thymidylate synthase	NA	NA	NA	NA
WP_004528317.1\|1044047_1044788_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_004547623.1\|1045015_1045816_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_009981568.1\|1045905_1047336_+	thiamine pyridinylase	NA	NA	NA	NA
WP_004531802.1\|1047589_1048336_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_154585294.1\|1048385_1048856_+	hypothetical protein	NA	NA	NA	NA
WP_004528311.1\|1049424_1049904_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_004528310.1\|1050001_1052515_+	cation-translocating P-type ATPase	M1HM40	Paramecium_bursaria_Chlorella_virus	3.6e-57	27.9
WP_024431542.1\|1052566_1053190_+	hypothetical protein	NA	NA	NA	NA
WP_004532969.1\|1053604_1054225_+	hypothetical protein	NA	NA	NA	NA
WP_004531797.1\|1054624_1054879_+	hypothetical protein	NA	NA	NA	NA
WP_004531796.1\|1055352_1056582_+	CapA family protein	S4VS02	Pandoravirus	7.9e-114	56.2
WP_004553375.1\|1056875_1059683_-	hsp70 family protein	A0A2H4UU19	Bodo_saltans_virus	1.7e-07	26.1
WP_004539133.1\|1059686_1061534_-	Hsp70 family protein	NA	NA	NA	NA
WP_024431543.1\|1061530_1062106_-	DUF2760 domain-containing protein	NA	NA	NA	NA
WP_004542746.1\|1062475_1063240_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
WP_011205535.1\|1063751_1064303_+	ProQ/FinO family protein	NA	NA	NA	NA
WP_004524142.1\|1064316_1064646_+	H-NS histone family protein	NA	NA	NA	NA
WP_009971809.1\|1065370_1066486_+	alanine dehydrogenase	NA	NA	NA	NA
WP_024431544.1\|1068225_1069326_-	phage late control D family protein	A4JWX2	Burkholderia_virus	1.1e-202	98.9
WP_009935906.1\|1069325_1069751_-\|tail	phage tail protein	A4JWS2	Burkholderia_virus	3.3e-72	99.3
WP_024431545.1\|1069768_1072729_-	hypothetical protein	A4JWX4	Burkholderia_virus	0.0e+00	98.8
WP_011204755.1\|1072731_1072845_-\|tail	GpE family phage tail protein	A4JWX5	Burkholderia_virus	1.9e-14	100.0
WP_004531064.1\|1072853_1073198_-\|tail	phage tail assembly protein	K4NXA3	Burkholderia_phage	1.0e-55	100.0
WP_004524455.1\|1073255_1073765_-\|tail	phage major tail tube protein	K4NZR9	Burkholderia_phage	4.9e-94	100.0
WP_004531063.1\|1073780_1074953_-\|tail	phage tail sheath protein	Q45YG5	Burkholderia_virus	6.8e-224	100.0
WP_004531062.1\|1075008_1075680_-\|tail	phage tail fiber assembly protein	K4NXJ9	Burkholderia_phage	3.0e-115	100.0
WP_015985015.1\|1075696_1078060_-	hypothetical protein	A4JWY0	Burkholderia_virus	0.0e+00	100.0
WP_004531060.1\|1078070_1078625_-\|tail	phage tail protein I	K4NXA0	Burkholderia_phage	2.2e-100	100.0
WP_009941340.1\|1078617_1079523_-\|plate	baseplate assembly protein	A4JWY2	Burkholderia_virus	8.0e-164	100.0
WP_009941341.1\|1079519_1079882_-\|plate	baseplate assembly protein	A4JWY3	Burkholderia_virus	2.3e-61	100.0
WP_024431546.1\|1079878_1080559_-\|plate	phage baseplate assembly protein V	A4JWY4	Burkholderia_virus	7.9e-124	100.0
WP_011401235.1\|1080732_1081509_+	site-specific DNA-methyltransferase	A4JWT4	Burkholderia_virus	2.1e-149	100.0
WP_009897040.1\|1081674_1082205_-	hypothetical protein	K4NX96	Burkholderia_phage	3.0e-94	100.0
WP_004531055.1\|1082331_1082799_-	phage virion morphogenesis protein	K4NZQ8	Burkholderia_phage	1.2e-78	100.0
WP_004531054.1\|1082795_1083212_-\|tail	phage tail protein	A4JWT7	Burkholderia_virus	3.3e-72	100.0
WP_009971799.1\|1083316_1083757_-	bacteriophage protein	K4NXJ2	Burkholderia_phage	3.8e-71	100.0
WP_009941345.1\|1083753_1084566_-	DUF3380 domain-containing protein	A4JWZ0	Burkholderia_virus	1.2e-150	100.0
WP_004524440.1\|1084562_1084835_-\|holin	phage holin family protein	K4NX91	Burkholderia_phage	8.8e-42	100.0
WP_004524439.1\|1084836_1085181_-	membrane protein	K4NZQ3	Burkholderia_phage	2.9e-50	100.0
WP_004524438.1\|1085195_1085402_-\|tail	tail protein	K4PAW7	Burkholderia_phage	2.4e-31	100.0
WP_004534234.1\|1085398_1085650_-	hypothetical protein	A4JWZ4	Burkholderia_virus	8.4e-39	98.8
WP_009979065.1\|1085649_1086129_-\|head	head completion/stabilization protein	K4NZV5	Burkholderia_phage	1.3e-80	99.4
WP_024431547.1\|1086228_1086918_-\|terminase	terminase endonuclease subunit	A4JWP8	Burkholderia_virus	1.5e-117	99.6
WP_004531048.1\|1086914_1087928_-\|capsid	phage major capsid protein, P2 family	K4NZP8	Burkholderia_phage	7.2e-190	100.0
WP_004532870.1\|1087961_1088771_-\|capsid	GPO family capsid scaffolding protein	A4JWU8	Burkholderia_virus	3.2e-148	100.0
WP_024431548.1\|1088914_1090684_+\|terminase	terminase ATPase subunit family protein	A4JWU9	Burkholderia_virus	0.0e+00	100.0
WP_004556602.1\|1090680_1091736_+\|portal	phage portal protein	A4JWV0	Burkholderia_virus	5.2e-207	100.0
WP_015985014.1\|1091779_1092136_-	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	3.2e-44	100.0
WP_024431052.1\|1092138_1092435_-	type II toxin-antitoxin system RelE/ParE family toxin	A4JWV2	Burkholderia_virus	1.1e-50	100.0
WP_011205521.1\|1093026_1094148_-	DUF3396 domain-containing protein	A4JWV3	Burkholderia_virus	4.4e-220	100.0
WP_011205520.1\|1094156_1094894_-	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	5.9e-133	100.0
WP_004532793.1\|1094890_1095424_-	bacteriophage gp29 protein	A4JWV5	Burkholderia_virus	8.4e-97	100.0
WP_009897078.1\|1095526_1095649_-	CopG family transcriptional regulator	A4JWV6	Burkholderia_virus	5.9e-14	100.0
WP_004532770.1\|1095882_1096536_-	AAA family ATPase	A4JWV7	Burkholderia_virus	1.4e-114	100.0
WP_004532731.1\|1096625_1096832_-	ogr/Delta-like zinc finger family protein	A4JWV8	Burkholderia_virus	8.7e-34	100.0
WP_009971787.1\|1096828_1097095_-	ogr/Delta-like zinc finger family protein	A4JWV9	Burkholderia_virus	3.1e-44	100.0
WP_009971786.1\|1097110_1098904_-	replication endonuclease	A4JWW0	Burkholderia_virus	0.0e+00	100.0
WP_006027270.1\|1098903_1099026_-	hypothetical protein	A4JWW1	Burkholderia_virus	7.7e-14	97.5
WP_009971785.1\|1099109_1100351_-	hypothetical protein	A4JWW2	Burkholderia_virus	1.7e-225	100.0
WP_009971784.1\|1100552_1100765_-	hypothetical protein	A4JWW3	Burkholderia_virus	1.1e-34	100.0
WP_009971783.1\|1101071_1101287_-	hypothetical protein	A4JWW5	Burkholderia_virus	2.1e-30	100.0
WP_009897093.1\|1101290_1101512_-	hypothetical protein	A4JWW6	Burkholderia_virus	1.6e-38	100.0
WP_004532752.1\|1101827_1102610_-	hypothetical protein	A4JWW8	Burkholderia_virus	6.7e-143	100.0
WP_009897097.1\|1102990_1103329_+	helix-turn-helix domain-containing protein	A4JWW9	Burkholderia_virus	5.4e-57	100.0

DBSCAN-SWA_3

1755030 : 1822806

Aeromonas_phage(25.0%)

holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004535035.1\|1755030_1755981_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004523149.1\|1756248_1757193_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_004530060.1\|1757664_1759368_+	thermolysin metallopeptidase	NA	NA	NA	NA
WP_004530059.1\|1759485_1760712_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_004200640.1\|1760766_1761909_-	porin	NA	NA	NA	NA
WP_004198249.1\|1762017_1762140_-	hypothetical protein	NA	NA	NA	NA
WP_004530058.1\|1762136_1763174_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004186939.1\|1763170_1764724_-\|holin	choline-sulfatase	NA	NA	NA	NA
WP_004551409.1\|1764886_1765759_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004186920.1\|1765902_1766778_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_004530057.1\|1766864_1768520_-	APC family permease	NA	NA	NA	NA
WP_004523141.1\|1768700_1769564_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004530056.1\|1769673_1770819_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_004535147.1\|1770839_1772081_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004530055.1\|1772132_1772918_-	drug:proton antiporter	NA	NA	NA	NA
WP_004202150.1\|1772914_1774087_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_004186901.1\|1774091_1776017_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004186960.1\|1776019_1778083_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_004186987.1\|1778143_1778677_-	4-vinyl reductase	NA	NA	NA	NA
WP_004186989.1\|1778827_1779799_-	membrane dipeptidase	NA	NA	NA	NA
WP_004530801.1\|1779871_1781146_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	5.3e-105	54.1
WP_160457400.1\|1781281_1781566_-	hypothetical protein	NA	NA	NA	NA
WP_004198247.1\|1781579_1782605_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_004523135.1\|1782782_1783982_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	8.4e-12	27.2
WP_004530800.1\|1784449_1785466_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004546670.1\|1785654_1787220_+	glycoside hydrolase 68 family protein	NA	NA	NA	NA
WP_009971496.1\|1787352_1789020_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	3.5e-56	31.4
WP_024431273.1\|1789533_1790787_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_038764003.1\|1791525_1793109_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_038724161.1\|1793105_1793288_-	hypothetical protein	NA	NA	NA	NA
WP_009927659.1\|1793413_1794409_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_004524286.1\|1794637_1796224_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_011205424.1\|1796220_1797540_-	glycosyltransferase	NA	NA	NA	NA
WP_162482190.1\|1797429_1797756_+	hypothetical protein	NA	NA	NA	NA
WP_024431046.1\|1797797_1798697_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_004536812.1\|1799247_1799523_-	hypothetical protein	NA	NA	NA	NA
WP_004190471.1\|1799843_1800269_-	hypothetical protein	NA	NA	NA	NA
WP_004190863.1\|1800291_1800651_-	hypothetical protein	NA	NA	NA	NA
WP_004525554.1\|1800709_1804213_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_024431045.1\|1804209_1805868_-	OmpA family protein	NA	NA	NA	NA
WP_004525552.1\|1805950_1807312_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004202226.1\|1807308_1807902_-	hypothetical protein	NA	NA	NA	NA
WP_004190606.1\|1807907_1808297_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_004530790.1\|1808339_1809056_-	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_004525550.1\|1809058_1810129_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_004530041.1\|1810128_1812345_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_004190563.1\|1812348_1814637_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004525548.1\|1814802_1817094_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004530040.1\|1817084_1819955_-	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	2.4e-60	27.2
WP_004190851.1\|1819957_1820947_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004196180.1\|1820943_1822806_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_4

1986615 : 1995926

Burkholderia_virus(57.14%)

transposase,integrase

attL 1974793:1974809|attR 2000981:2000997

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1974793:1974809	attL	NA	NA	NA	NA
WP_004525420.1\|1986615_1986900_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	1.4e-10	50.0
WP_009971435.1\|1986883_1987153_-	BrnT family toxin	NA	NA	NA	NA
WP_025988352.1\|1987705_1987981_+	hypothetical protein	Q6JIH4	Burkholderia_virus	6.1e-43	98.9
WP_004538072.1\|1988257_1988479_+	hypothetical protein	NA	NA	NA	NA
WP_162482191.1\|1988445_1988745_+	hypothetical protein	Q6JIH9	Burkholderia_virus	1.1e-34	95.8
WP_004542548.1\|1988975_1989557_-	hypothetical protein	A9YX38	Burkholderia_phage	2.2e-21	100.0
WP_004537646.1\|1989815_1989965_+	bacteriophage protein Gp44	Q8W6Q6	Burkholderia_virus	3.3e-19	100.0
WP_038725131.1\|1989961_1991161_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A4JX31	Burkholderia_virus	4.1e-224	99.2
WP_024431205.1\|1991456_1993472_-	cation acetate symporter	NA	NA	NA	NA
WP_004547951.1\|1993465_1993846_-	DUF4212 domain-containing protein	NA	NA	NA	NA
WP_024431204.1\|1993943_1995926_-	acetate--CoA ligase	A0A2H4PQU7	Staphylococcus_phage	4.0e-83	44.8
2000981:2000997	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2814151 : 2866040

Burkholderia_virus(16.67%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_144399935.1\|2814151_2815310_+\|transposase	IS3-like element ISBps2 family transposase	A4JX31	Burkholderia_virus	2.5e-77	98.6
WP_004552203.1\|2815442_2816357_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_024431035.1\|2816538_2817243_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_004205458.1\|2817899_2818217_-	chorismate lyase	NA	NA	NA	NA
WP_071898311.1\|2818153_2818399_-	chorismate lyase	NA	NA	NA	NA
WP_024429094.1\|2818526_2819771_-	flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_004544579.1\|2820035_2820221_-	hypothetical protein	NA	NA	NA	NA
WP_024429093.1\|2820239_2822138_+	DUF3857 and transglutaminase domain-containing protein	NA	NA	NA	NA
WP_004544816.1\|2822180_2823617_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_004190377.1\|2823671_2824073_-	TssQ family T6SS-associated lipoprotein	NA	NA	NA	NA
WP_004190712.1\|2824712_2825231_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004190585.1\|2825227_2826631_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004529328.1\|2826646_2827963_+	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_004524806.1\|2827965_2831595_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_162482195.1\|2831576_2832587_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_004529325.1\|2832571_2832799_-	hypothetical protein	NA	NA	NA	NA
WP_024431037.1\|2832797_2835407_+	serine/threonine protein kinase	M1I231	Acanthocystis_turfacea_Chlorella_virus	5.0e-09	26.6
WP_004529323.1\|2835459_2836539_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004524810.1\|2836601_2837180_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004190849.1\|2837172_2838681_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004190698.1\|2838740_2839232_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004196148.1\|2839250_2839811_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_024431038.1\|2839815_2841687_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004529321.1\|2841683_2843162_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004529320.1\|2843140_2845807_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.8e-78	30.7
WP_004203275.1\|2845803_2848008_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.6e-46	29.9
WP_004529319.1\|2848023_2848734_+	hypothetical protein	NA	NA	NA	NA
WP_024431039.1\|2848693_2849953_+	DUF746 domain-containing protein	NA	NA	NA	NA
WP_004524822.1\|2850684_2851425_-	hypothetical protein	NA	NA	NA	NA
WP_029670706.1\|2852767_2853922_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_143284288.1\|2854272_2854860_+	hypothetical protein	NA	NA	NA	NA
WP_024431041.1\|2855694_2856333_+	hypothetical protein	NA	NA	NA	NA
WP_004524825.1\|2856375_2857620_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.1e-22	32.8
WP_024431042.1\|2857655_2858897_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_004524828.1\|2858959_2859883_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_004524829.1\|2859883_2860735_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_004546333.1\|2860739_2862911_+	alpha-galactosidase	NA	NA	NA	NA
WP_009972372.1\|2863151_2865185_+	hypothetical protein	NA	NA	NA	NA
WP_004539264.1\|2865632_2866040_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	2.4e-11	36.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP008911

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008911_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008911_1

1109024-1109104

Orphan

Consensus_repeat	Method
ACGGAATGGGCCCCGGCATGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008911_1

>merge|NZ_CP008911|1|1109024-1109104|CRISPRCasFinder
ACGGAATGGGCCCCGGCATGATGCGCGGCGGCTACGGGCGCGGAATGATGGGCGGCTACGGAATGGGGCCCGGCATGATGC

>NZ_CP008911|1|1|1109024-1109104|CRISPRCasFinder
ACGGAATGGGCCCCGGCATGATGC	GCGGCGGCTACGGGCGCGGAATGATGGGCGGCT
ACGGAATGGGGCCCGGCATGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008911.1\|WP_004523120.1\|1115022_1116117_-\|bifunctional-DNA-binding-transcriptional-regulator/O6-methylguanine-DNA-methyltransferase-Ada	unknown	unknown	gnl\|CDD\|185333
NZ_CP008911.1\|WP_004523110.1\|1105441_1106554_-\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212521
NZ_CP008911.1\|WP_024428821.1\|1114084_1115026_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NZ_CP008911.1\|WP_024431617.1\|1107819_1108788_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP008911.1\|WP_009969932.1\|1102504_1103530_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270382
NZ_CP008911.1\|WP_038724261.1\|1097394_1098486_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|222860
NZ_CP008911.1\|WP_004189258.1\|1104555_1105431_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP008911.1\|WP_009969935.1\|1099577_1100591_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378890
NZ_CP008911.1\|WP_011325037.1\|1106582_1107677_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP008911.1\|WP_009969933.1\|1101626_1102508_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP008911.1\|WP_009972644.1\|1100775_1101630_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP008911.1\|WP_004530511.1\|1117168_1117723_-\|YaeQ-family-protein	unknown	unknown	gnl\|CDD\|377782
NZ_CP008911.1\|WP_004197761.1\|1116518_1116935_+\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|319916
NZ_CP008911.1\|WP_004524603.1\|1118775_1119336_-\|spermidine-N1-acetyltransferase	unknown	unknown	gnl\|CDD\|237916
NZ_CP008911.1\|WP_009969936.1\|1099136_1099571_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP008911.1\|WP_004535409.1\|1112312_1113926_-\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|235001
NZ_CP008911.1\|WP_004536432.1\|1117942_1118290_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008911.1\|WP_004524601.1\|1120012_1120168_-\|lipoprotein	unknown	unknown	gnl\|CDD\|215083
NZ_CP008911.1\|WP_004525837.1\|1110039_1110588_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008911.1\|WP_004531075.1\|1110850_1112299_+\|RNA-polymerase-sigma-factor-RpoD/SigA	unknown	unknown	gnl\|CDD\|274108

Protein	Function_ID	Function_description	E-value
NZ_CP008911.1\|WP_004523120.1\|1115022_1116117_-\|bifunctional-DNA-binding-transcriptional-regulator/O6-methylguanine-DNA-methyltransferase-Ada	gnl\|CDD\|185333	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada.	8.19665e-122
NZ_CP008911.1\|WP_004523110.1\|1105441_1106554_-\|histone-deacetylase	gnl\|CDD\|212521	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII. This subfamily includes bacterial as well as eukaryotic Class II histone deacetylase (HDAC) and related proteins. Deacetylases of class II are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. Included in this family is a bacterial HDAC-like amidohydrolase (Bordetella/Alcaligenes species FB18817, denoted as FB188 HDAH) shown to be most similar in sequence and function to class II HDAC6 domain 3 or b (HDAC6b). FB188 HDAH is able to remove the acetyl moiety from acetylated histones, and can be inhibited by common HDAC inhibitors such as SAHA (suberoylanilide hydroxamic acid) as well as class II-specific but not class I specific inhibitors.	1.0559e-172
NZ_CP008911.1\|WP_024428821.1\|1114084_1115026_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	3.30127e-53
NZ_CP008911.1\|WP_024431617.1\|1107819_1108788_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.12014e-69
NZ_CP008911.1\|WP_009969932.1\|1102504_1103530_+\|extracellular-solute-binding-protein	gnl\|CDD\|270382	cd13664, PBP2_PotD_PotF_like_3, TThe periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.09944e-170
NZ_CP008911.1\|WP_038724261.1\|1097394_1098486_-\|phage-portal-protein	gnl\|CDD\|222860	PHA02536, Q, portal vertex protein; Provisional.	0
NZ_CP008911.1\|WP_004189258.1\|1104555_1105431_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP008911.1\|WP_009969935.1\|1099577_1100591_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.06814e-39
NZ_CP008911.1\|WP_011325037.1\|1106582_1107677_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.78958e-149
NZ_CP008911.1\|WP_009972644.1\|1100775_1101630_+\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	8.28809e-81
NZ_CP008911.1\|WP_004530511.1\|1117168_1117723_-\|YaeQ-family-protein	gnl\|CDD\|377782	pfam07152, YaeQ, YaeQ protein. This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialized transcription elongation protein. YaeQ is known to compensate for loss of RfaH function.	1.52049e-103
NZ_CP008911.1\|WP_004197761.1\|1116518_1116935_+\|lactoylglutathione-lyase	gnl\|CDD\|319916	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins. Uncharacterized subfamily of VOC family contains human glyoxalase domain-containing protein 5 and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.46868e-30
NZ_CP008911.1\|WP_004524603.1\|1118775_1119336_-\|spermidine-N1-acetyltransferase	gnl\|CDD\|237916	PRK15130, PRK15130, spermidine N1-acetyltransferase; Provisional.	7.47948e-86
NZ_CP008911.1\|WP_009969936.1\|1099136_1099571_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.4965e-11
NZ_CP008911.1\|WP_004535409.1\|1112312_1113926_-\|glutamate--cysteine-ligase	gnl\|CDD\|235001	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional.	0
NZ_CP008911.1\|WP_004524601.1\|1120012_1120168_-\|lipoprotein	gnl\|CDD\|215083	PLN00162, PLN00162, transport protein sec23; Provisional.	0.00226922
NZ_CP008911.1\|WP_009969933.1\|1101626_1102508_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	2.10087e-82
NZ_CP008911.1\|WP_004531075.1\|1110850_1112299_+\|RNA-polymerase-sigma-factor-RpoD/SigA	gnl\|CDD\|274108	TIGR02393, RNA_polymerase_sigma_factor_RpoD, RNA polymerase sigma factor RpoD, C-terminal domain. This model represents the well-conserved C-terminal region of the major, essential sigma factor of most bacteria. Members of this clade show considerable variability in domain architecture and molecular weight, as well as in nomenclature: RpoD in E. coli and other Proteobacteria, SigA in Bacillus subtilis and many other Gram-positive bacteria, HrdB in Streptomyces, MysA in Mycobacterium smegmatis, etc. [Transcription, Transcription factors].	2.83254e-88

>NZ_CP008911.1|WP_024431617.1|1107819_1108788_+|LysR-family-transcriptional-regulator
MRRIDLLSALETFVCAVEEGSLSQAARRLAKTPSAVTKAIAGLEATLGVQLLERTTRRLALTESGRLYLATATDVLRRLADGARQLSERDDEPRGLLRVTAAHSFGHAILAPLCAPFAQAFPRVRIELSLSDHYVDIVGEGFDLALRMGNYDLPSQIVKPIGSNRGLLCASPGYLARRGRPTAPADLAQHDCVIYRHPTLANTWTFERGGVRARLEPKGPLVTDDYGLALAAALYGAGVLPCPQWSVVDALEAGRLVPLLVDWRFESASFGEDRICAAYPSSRRGSTKIRRLVERVQARLADSEARVARVLGDALCADLARR
>NZ_CP008911.1|WP_011325037.1|1106582_1107677_-|polyamine-ABC-transporter-substrate-binding-protein
MKRIAWLAAVLASLACAAARAADGNVLNIYNWAEYFAPDTIADFEKETGIKVRLDVYDSNEALQTKLTTGNSGYDLVFPSNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGLNVAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTDPRDYEAALDMMKTIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQQIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNKVMYPNPNRVATPLVDRRLTANPAIYPDAATMRTLWVKRPMPPQAMRMQTRYWTRFKTGY
>NZ_CP008911.1|WP_004523110.1|1105441_1106554_-|histone-deacetylase
MIPTGLLFDPAFLSHRQGDLVYVVPHGTLNLGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATDEQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTGPLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQQAFYDDPSVLFVSLHEAANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRHAFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGRIVMLQEGGYSLPYLPIATLGVLEGLVGWNAPFDDPHQFVQYPLGEGERAAVKAARAALAPYWPTLHRS
>NZ_CP008911.1|WP_004189258.1|1104555_1105431_-|N-carbamoylputrescine-amidase
MRKTTVAVTQMACDWNVDANLSRAERLVRDAAARGAQIVLLQELFETPYFCIDQHPAHLALAQPYEGHPWLMRFASLARELGVVLPVSFFERAGQTQFNSVAIFDADGRALGIYRKTHIPDGPGYTEKYYFTPGDTGFRVWDTAYGRIGVGICWDQWFPECARAMALAGAELLLYPSAIGSEPHDASIDSRAHWRNAQRGHAAANLMPVAASNRVGVERGASGEIVFYGSSFIAGADGEMIVECDRHGEAIATAEFDLDALAYRRRGWGVFRDRRPECYRALSEGAADRVR
>NZ_CP008911.1|WP_009969932.1|1102504_1103530_+|extracellular-solute-binding-protein
MKAWLTLLLTMTFGFVQAAELHLANWPDWMPPELLKKFEKETGIKTTLDIYDSDATLLSKLQAGGGGYDVVVAGDYYVQVFAKNGLVRKLDKSRLRNMANIMPEYRHPLFDPNRDYTVPYLIFMTGFAYDGARVPGGKLDDSWKSLFDPPAALRGEIADLDSVEELYMAASWYLKQDECTENPEDAKRVLAVLRKQKPYVKTYSNEGTIDRMISRQVVVQHGWSGATVRVQRKLPSAAFALPREGVRMAQDNFLIPAKAKNVNEAHTFLNWMMKPENMAAASNAYLYPNEISGAERYMSADLLKNPAVMLPAAYKERLRPFKLCSPAALALRDKVWTLFKQ
>NZ_CP008911.1|WP_009969933.1|1101626_1102508_+|ABC-transporter-permease
MNSAQPARHRFPFAVYAAIGAFAFLYAPMVALVALSFNQGDSSLVWAGWGLHGYVDAWQDPTLMRAARNSLALAGTSAAIATALATLAAVVMWAREGRGKTVIESLIGVPLIVPEIVMAIATLLLFSALSIDLSFYTVLLAHVAFCLPFAYLPIRARLRRIDPLLLDAAADLSATPWAAFRQITLPLALPGIAAGAMLAFLTSMDDFVITYFVAGPGVTTLPMYIFGALKFGLTPKINAISTIMLALSAIVAIVGSASVRSDATDDARDESPAGDAAARAHPLFSHTNEIEVL
>NZ_CP008911.1|WP_009972644.1|1100775_1101630_+|ABC-transporter-permease
MLSPVVALLMVGTLLPIAVVASVSLMRPLAYGGVDWGRFSFDAYLNLIVDRDFDGNLIFQSDHVRIFARSLALAAATTAGCVALGVPTALFIATQPPRRKNALLILVTIPFWTSLVIRSYAWIILIADHGFANRALNGLGVLAGPLGLLYTTPATLIGLLYTFFPFMVLPVYASLDDFDWRIVEAAYDLGATQWRALRDVVIPNCMPGIAAGIGLVFVPALGSYVIPNLLGGSHSMMIGNLIEMKFTQGRNWPLGASLSLALLGLVLAMMLARRLTSAKREVLA
>NZ_CP008911.1|WP_009969935.1|1099577_1100591_+|helix-turn-helix-domain-containing-protein
MASSDKPRSLAARRPASLHAVAVAVDMLQRRGLSTELILSGSGIAPAELRQPNKIISHAQEMVIYHNAWRMTGDSAIGLAMADAVPLTAYMPLGLAMMVSPTLGAAIELANSCPLLALCYFTTRLETKGSRAVITFSDYSYRPDLYVLNTDMCLAGLRRQMFDLLGGPPTFRQVTLAFDAPKHAYAYESLFQCPIRFSAPAHSFTLDANCMNTPLPMAHQLEHMIAKDACVRREQELEQWVAADVVGKALHYLYDHPFTGTVPALAGALGMSTRTLQRKLKQSGTSLQRLLEQVRRDLLIQDLALGSRSRKDIARHIGYKDPTSVSRARRRWAKEDS
>NZ_CP008911.1|WP_009969936.1|1099136_1099571_+|GNAT-family-N-acetyltransferase
MEFRPIKESDLGSTYDIRFSVTENRILPHQIHLLDRDRVLEQLRSGFGVLAIEGDAAVGYCTATGGRHAFINALFVRPAWHGAGVGREMLERALAWLREQASESVSLVTDPGSRADGFYQHLGWIRGELDSYGCQVTFRKSLST
>NZ_CP008911.1|WP_038724261.1|1097394_1098486_-|phage-portal-protein
MSSWRRRASTTAPSACSNVTSSAATTLRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAELNDWLGDEVVRFDDYEIPPAPVAV
>NZ_CP008911.1|WP_004525837.1|1110039_1110588_+|hypothetical-protein
MEEAYARRALLLHLGSVLQILSRLEGAPDNQSIEALLAANGMLADVPLVEYVVQDMTVREFSARALRAFCLWPQLLLEDPLDCAALALPVRKHLFAGNDAGWKAYAATLREVSPGFDTARSYAAEPHEAEFDLADERDAETGDGPVERDDEADDDGRLRERAAASVESATPAGAPVRRESYE
>NZ_CP008911.1|WP_004531075.1|1110850_1112299_+|RNA-polymerase-sigma-factor-RpoD/SigA
MKVSARELRYEQGIDRLLELAGARDDTEYADVADEFASAPSSAFAHDLGEPDSLDHQASDESAGAGSFGDKPTRPAHGDTDVDTDWRDDDAPPSGSNDAAPVDTTASTDPLALFVRRMHAVPLLTHAQEIALAAEIEAGREQVLQALAEALDRLDLASLPADPALGRARAALQRARARGDEGARAFARARTAAYAALAAHGWPSAEVDAVRRAMRRLPTSPEKSDAGAQRAFADGEARISAATARMAEANLRLVLSIARKYASRGLDLADLLQEGNLGLLRAIEKFEHRRGFKFSTYATWWIRQAISRAIADRARTIRVPVHVGDEARRVRKAADRIERRSGVSASLAELSEATGLPAERLRAVLTLPREPRSLNAPLGDDDQAEFGDIVEDTSTPSLFDALAHGQMCDVVTSLLKTMSAQEADILRRRFGIGGDEPWSYEQIAARAGVSREQVRRIEKRALQTLRVTAEACNAHDFLDVQP
>NZ_CP008911.1|WP_004535409.1|1112312_1113926_-|glutamate--cysteine-ligase
MPNNMTSRQTDLLQQRLAVLSTSPTREQLPDGLRGIEKESLRVTRDGMIAFTPHPRALGSALTHPSLTTDYSEALVELITPAERDAATTLERLDELHRYVYASLGDEMLWTDSMPGLLPADDEIPIADYGTSNIGRLKTVYRRGLAYRYGRTMQCIAGIHYNYSLSEEVWRRLHAEEGSTAGIVDYQSERYLALIRNFRRTSWLLMYLFGASPALDAGFLRGRAHKLDTFDAATLYRPHATSLRMSDLGYSNTTAQAALQADYNTLSGYLDALSKAVSEPYPPYEAIGTHRDGEWIQINTNVLQIENEFYSTIRPKRVTYSGERPLHALASRGVQYIEVRCLDIDPFEPTGIALDTARFLDAYLLVCALDESAPLTCDAYRESNANFGRVTMEGRKPGLELTRDGAAVPMRAWADEIFAQIEAAGRVLDDIRGDDTHARAIAAQRAKLDDPELTSSARVLRAMRENGQSFLEFARAQSAAHAAYFHGRPLDEAATRDARALAERSLAEQAELEGKNAGSFDAFVAAYRAYTLNRFSV
>NZ_CP008911.1|WP_024428821.1|1114084_1115026_-|DNA-3-methyladenine-glycosylase-2-family-protein
MSAAVEPAAVRPDSVVLELPFKSPYDWPRVLRFFAGRAIPGVEAVGDGAYRRTVDHHGAIGTLTVRKHPRKRCLVALVEGDAARHADAAFAARLSTMFDLQADPAAIGAHLARDAWFAPLVGAAPGLRVPGAWSGFELIVRAIVGQQVSVKAATTIVGRLVERAGERLAPHAPGAIGWRFPEPAALAACDVSRIGMPGKRAAALQGVARAVAAGDVPLEAYASDPAGVRAALLALPGIGPWTVEYVAMRAWRDADAWPATDLVLMQAIVARDPALDRPASQRLRADAWRPWRAYAAMHLWNEIADRAGSARGG
>NZ_CP008911.1|WP_004523120.1|1115022_1116117_-|bifunctional-DNA-binding-transcriptional-regulator/O6-methylguanine-DNA-methyltransferase-Ada
MKQPPYPTDDARWAALVARDVDADGAFCYAVKTTGVFCRPSCASRLPRRENVSFFADTGAARAAGYRPCKRCRPEGLPRELDIVNRACAVLDAHRQDRFTLAQLSDAVHVSPFHLQRLFKRVVGVSPRQYQAAQRGAALRDALQSGAAVTRAAVDAGFNSPSRLYESVPRELGMSPSAFRRKGAGLKIDYATADTRLGVVLVAATSKGICKIAFGDAAAPLVDELRTGFANAQIAESPERIAPFIAQVDAYLNGTRRRFELPLDLAATEFQQRVWDALRRIPYGETRSYTQIAEALGAPRAVRAVASACASNPVALAIPCHRVVQKGGSLAGYRWGLPRKAALLDAEAQRAAGESVESAVDHAA
>NZ_CP008911.1|WP_004197761.1|1116518_1116935_+|lactoylglutathione-lyase
MKFHIHEIDHVVLRAADLAAMTRFYCDVLGCHVEKEQRELGLVQLRAGRSLIDLLAVGAPIDRAGSGAPGKGRNMDHLCLRVEPFDAAALRTHLAAHGARPGDEARRYGADGYGPSLYLFDPEGNMVELKGPPEAVAP
>NZ_CP008911.1|WP_004530511.1|1117168_1117723_-|YaeQ-family-protein
MALKSTIYKAELQIADMDRHYYADHSLTVARHPSETDERMMVRIAAFALFAHERLEFCKGLSDTDEPDLWQKDLTGAIEVWVDVGQPDERRIAKASGRAGRVNVIAYGGRTSDIWWQGARGKVERLRNVQVTTLADGVAAALGGLAERTMRLQCTIQDGAAWLSSATHDPVAIEWTTLKAREDA
>NZ_CP008911.1|WP_004536432.1|1117942_1118290_-|hypothetical-protein
MLKRTGLFLALAGGIVAFSVAQANGDASLKPQQEIQLTKNAWGCLSKDNLDSVLNHERDGKAQAKQQYFDDYRCLSVPEGQRFRVVSVDKGDVQFVSAENSDQQGLWTDARFIKQ
>NZ_CP008911.1|WP_004524603.1|1118775_1119336_-|spermidine-N1-acetyltransferase
MQIQNEQHTLALRPLERQDLRFVHELNNDAKIMRYWFEEPYETFTELSQLYDQHVHDQRERRFVAFDSDGELVGLVELIELDYIHRRGEFQIIIAPNRQGRGFATRATRLAVEYAFKVLNLRKLYLIVDKSNVAAIRVYEKCGFKHEAELIEEFFGNGQYHNALRMCIFQRDYFAAQPGAELHARE
>NZ_CP008911.1|WP_004524601.1|1120012_1120168_-|lipoprotein
MKKIIIALAVSAGILSGCAVYVPDQPGVIMAPQGGPGNGFCPPGQAKKGNC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP008911_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008911_2

3851009-3851154

Orphan

Consensus_repeat	Method
CGGCAGATGCCGTTCGTGCGCGAGCCGCTGCGAACTTGCGAACGGCATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008911_2

>merge|NZ_CP008911|2|3851009-3851154|CRISPRCasFinder
CGGCAGATGCCGTTCGTGCGCGAGCCGCTGCGAACTTGCGAACGGCATTCGGCCGCCAGCGCTGCAACGCTTGTCGCGCCGGCGTTCGCCGCATACGCGGCAGATGCCGTTCGTGCGCGAGCCGCTGCGAACTTGCGAACGGCATT

>NZ_CP008911|2|2|3851009-3851154|CRISPRCasFinder
CGGCAGATGCCGTTCGTGCGCGAGCCGCTGCGAACTTGCGAACGGCATT	CGGCCGCCAGCGCTGCAACGCTTGTCGCGCCGGCGTTCGCCGCATACG
CGGCAGATGCCGTTCGTGCGCGAGCCGCTGCGAACTTGCGAACGGCATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008911.1\|WP_160974052.1\|3842431_3842644_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008911.1\|WP_017843792.1\|3843688_3844861_-\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|226602
NZ_CP008911.1\|WP_004554502.1\|3851812_3853096_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|238923
NZ_CP008911.1\|WP_004192878.1\|3866689_3866881_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008911.1\|WP_004191162.1\|3868569_3868689_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008911.1\|WP_004526507.1\|3866877_3868242_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP008911.1\|WP_009980311.1\|3860412_3863757_-\|exodeoxyribonuclease-V-subunit-gamma	unknown	unknown	gnl\|CDD\|335690
NZ_CP008911.1\|WP_004193167.1\|3868393_3868573_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008911.1\|WP_004526525.1\|3842881_3843673_-\|molybdopterin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239026
NZ_CP008911.1\|WP_024431403.1\|3856603_3860416_-\|exodeoxyribonuclease-V-subunit-beta	unknown	unknown	gnl\|CDD\|236784
NZ_CP008911.1\|WP_004193128.1\|3848946_3849159_+\|glycine-zipper-2TM-domain-containing-protein	unknown	unknown	gnl\|CDD\|182532
NZ_CP008911.1\|WP_004195184.1\|3844851_3845676_-\|DUF1223-domain-containing-protein	unknown	unknown	gnl\|CDD\|369071
NZ_CP008911.1\|WP_024431404.1\|3853910_3856607_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|236783
NZ_CP008911.1\|WP_004542975.1\|3849410_3849635_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008911.1\|WP_004526521.1\|3845836_3846142_-\|pentapeptide-MXKDX-repeat-protein	unknown	unknown	gnl\|CDD\|131998
NZ_CP008911.1\|WP_004193488.1\|3853509_3853914_-\|aminoacyl-tRNA-hydrolase	unknown	unknown	gnl\|CDD\|181730
NZ_CP008911.1\|WP_004521871.1\|3864416_3866693_+\|membrane-protein	unknown	unknown	gnl\|CDD\|372320
NZ_CP008911.1\|WP_004545149.1\|3849905_3850838_+\|DMT-family-transporter	unknown	unknown	gnl\|CDD\|307170
NZ_CP008911.1\|WP_004521865.1\|3846791_3848723_+\|phosphomethylpyrimidine-synthase-ThiC	unknown	unknown	gnl\|CDD\|236451
NZ_CP008911.1\|WP_004192284.1\|3841492_3842428_-\|EamA-family-transporter	unknown	unknown	gnl\|CDD\|183067

Protein	Function_ID	Function_description	E-value
NZ_CP008911.1\|WP_017843792.1\|3843688_3844861_-\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|226602	COG4117, COG4117, Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) [Energy production and conversion].	1.34703e-55
NZ_CP008911.1\|WP_024431404.1\|3853910_3856607_-\|AAA-family-ATPase	gnl\|CDD\|236783	PRK10875, recD, exodeoxyribonuclease V subunit alpha.	1.63687e-72
NZ_CP008911.1\|WP_004526507.1\|3866877_3868242_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP008911.1\|WP_009980311.1\|3860412_3863757_-\|exodeoxyribonuclease-V-subunit-gamma	gnl\|CDD\|335690	pfam04257, Exonuc_V_gamma, Exodeoxyribonuclease V, gamma subunit. The Exodeoxyribonuclease V enzyme is a multi-subunit enzyme comprised of the proteins RecB, RecC (this family) and RecD. This enzyme plays an important role in homologous genetic recombination, repair of double strand DNA breaks resistance to UV irradiation and chemical DNA-damage. The enzyme (EC:3.1.11.5) catalyzes ssDNA or dsDNA-dependent ATP hydrolysis, hydrolysis of ssDNA or dsDNA and unwinding of dsDNA. This family consists of two AAA domains.	0
NZ_CP008911.1\|WP_004526525.1\|3842881_3843673_-\|molybdopterin-dependent-oxidoreductase	gnl\|CDD\|239026	cd02108, bact_SO_family_Moco, bacterial subgroup of the sulfite oxidase (SO) family of molybdopterin binding domains. This domain is found in a variety of oxidoreductases. Common features of all known members of this family, like sulfite oxidase and nitrite reductase, are that they contain one single pterin cofactor and part of the coordination of the metal (Mo) is a cysteine ligand of the protein and that they catalyze the transfer of an oxygen to or from a lone pair of electrons on the substrate. The specific function of this subgroup is unknown.	1.21624e-90
NZ_CP008911.1\|WP_004554502.1\|3851812_3853096_+\|EAL-domain-containing-protein	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	1.53746e-53
NZ_CP008911.1\|WP_024431403.1\|3856603_3860416_-\|exodeoxyribonuclease-V-subunit-beta	gnl\|CDD\|236784	PRK10876, recB, exonuclease V subunit beta; Provisional.	0
NZ_CP008911.1\|WP_004193128.1\|3848946_3849159_+\|glycine-zipper-2TM-domain-containing-protein	gnl\|CDD\|182532	PRK10540, PRK10540, osmotically-inducible lipoprotein OsmB.	5.81885e-06
NZ_CP008911.1\|WP_004195184.1\|3844851_3845676_-\|DUF1223-domain-containing-protein	gnl\|CDD\|369071	pfam06764, DUF1223, Protein of unknown function (DUF1223). This family consists of several hypothetical proteins of around 250 residues in length which are found in both plants and bacteria. The function of this family is unknown. Structurally it lies in the Thioredoxin-like superfamily.	3.14399e-68
NZ_CP008911.1\|WP_004192284.1\|3841492_3842428_-\|EamA-family-transporter	gnl\|CDD\|183067	PRK11272, PRK11272, putative DMT superfamily transporter inner membrane protein; Provisional.	4.46808e-57
NZ_CP008911.1\|WP_004526521.1\|3845836_3846142_-\|pentapeptide-MXKDX-repeat-protein	gnl\|CDD\|131998	TIGR02953, conserved_hypothetical_protein, pentapeptide MXKDX repeat protein. Members of this protein family are small bacterial proteins, each with an N-terminal signal sequence followed by up to 11 imperfect repeats of a pentapeptide. The pentapeptide repeat usually follows the form Met-Xaa-Lys-Asp-Xaa.	0.0017555
NZ_CP008911.1\|WP_004193488.1\|3853509_3853914_-\|aminoacyl-tRNA-hydrolase	gnl\|CDD\|181730	PRK09256, PRK09256, aminoacyl-tRNA hydrolase.	3.43394e-65
NZ_CP008911.1\|WP_004521871.1\|3864416_3866693_+\|membrane-protein	gnl\|CDD\|372320	pfam12805, FUSC-like, FUSC-like inner membrane protein yccS. This family has similarities to the fusaric acid resistance protein family. The proteins are lodged in the inner membrane.	6.66104e-82
NZ_CP008911.1\|WP_004545149.1\|3849905_3850838_+\|DMT-family-transporter	gnl\|CDD\|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	4.58404e-12
NZ_CP008911.1\|WP_004521865.1\|3846791_3848723_+\|phosphomethylpyrimidine-synthase-ThiC	gnl\|CDD\|236451	PRK09284, PRK09284, thiamine biosynthesis protein ThiC; Provisional.	0

>NZ_CP008911.1|WP_004545149.1|3849905_3850838_+|DMT-family-transporter
MNLKNALLLIVLAALWGASFLFIRVGVAEFGVAPLMALRVGIGALFLVALMLTRYAPRELIALLRQHARPLFVVGLLNSAAPFCLFAFAELTLSAGVTSVINATTPLWGALVAYLWLKDSLSLPRALGLVIGFAGVLTLVWDQVFSPHGANPASPATAALAAAAALGATLLYGIAANFTKRKLTGVDPLVSATGSMVGATILLLPFALATWPAAPVSAHAWGSVLALGIACTGVAYFIFFHLIAHIGPARAITVTFVIPVFGILWGALFLGERVSFAMLEGCVIVLLGTALATGAIRRIPGVRPQRNEAA
>NZ_CP008911.1|WP_004542975.1|3849410_3849635_+|hypothetical-protein
MNKTLVAAALASVALAGCYYPYGYYPASGYYAVPVQTAPVYVAPAYPAYYYPAPSLSLNFGYWSGGGRGYWRHH
>NZ_CP008911.1|WP_004193128.1|3848946_3849159_+|glycine-zipper-2TM-domain-containing-protein
MKSIRRIGVCAMLIATMASLSACDTMTTRQRNAAIGAGIGGVAGAAIGGNALSTIGGAAAGGLVGSQVGK
>NZ_CP008911.1|WP_004521865.1|3846791_3848723_+|phosphomethylpyrimidine-synthase-ThiC
MNANPKFLSADARVDAAAVAPLPNSRKVYVTGSQPDIRVPMREITQADTPTSFGGEKNPPIYVYDTSGPYTDPDAKIDIRAGLPALRQRWIDARGDTETLAGLTSDYGRERAADPATAELRFPGLHRHPRRAKAGKNVTQMHYARQGIITPEMEYIAIRENQRRAEYLESLKASGPNGAKLAAMMGRQHAGQAFGAAAFGANAPAEITPEFVRDEVARGRAIIPANINHPETEPMIIGRNFLVKINANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLQYVPLTANRMTGIVSRGGSIMAKWCLAHHKESFLYEHFEEICEIMKAYDVSFSLGDGLRPGSIYDANDEAQLGELKTLGELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLDWCKEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGAQVRDNALSKARFEFRWQDQFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQDVREFAAQQGVSENDALKKGMEVKAVEFVKSGSEIYHRQ
>NZ_CP008911.1|WP_004526521.1|3845836_3846142_-|pentapeptide-MXKDX-repeat-protein
MKRNLIAFASVAGFALAAPFAHAQNDAMSKDGMGMSKDAMSKGAMSGDAMSKDAMSKDAMSKDRMGKRHDHMAKGGMKAGPMSKDAMKEPMSSDKMSPMSN
>NZ_CP008911.1|WP_004195184.1|3844851_3845676_-|DUF1223-domain-containing-protein
MSTDMSISFSVSLRAVAAALSLAAAGAAQAAADGACMARSPDGRQALVELYTSEGCSSCPPADDWLARLAARRAALRVVPLALHVDYWDGLGWADRFAQHRFTERQHALAARGGGRFVYTPEVAVDGRELRDWRDADAFGRRVVATAAEPARVGIALAAKRRAGALDVALSVTPRVGAPRALDAYLALYENGVESQVRAGENRGATLRHERVVRQWIGPLAATADAHASLDVRRALPLPANLRAADAARYGVAAFVEDPATGDVLQALDLPLCG
>NZ_CP008911.1|WP_017843792.1|3843688_3844861_-|cytochrome-b/b6-domain-containing-protein
MRLNDARAIDQRTRVSPMSATPTTSASTTAMAGARASGAADAPARAPTGADVDAGATAWADATANATANATTDPTIDATADATTDAMANVTTDAATRVTANPPIHETANVPASTAAAATTEAVAGARAGAALDAAHPGATQTMSQTMSQTMSQTMAQTMAQTMTQTMTQAGTEAASPAGTDAAASGTCITRATRARRPIHPLWVRASHWLNALAAVTMALSGWRIYNASPIYAGFVFPRGATLGGWLGGALQWHFAAMWLLFFNGVFYLTMGVATRRFTRKLLPLSASGVARDLRDALRGRLSHDDLSVYNALQRAAYVAAIADLALLVLSGLVIWKSVQFPLLREWLGGYDRARVVHFWAMAFLVAFFVVHVAMAALVPRSLLAMLRGH
>NZ_CP008911.1|WP_004526525.1|3842881_3843673_-|molybdopterin-dependent-oxidoreductase
MSENDRKKRENDIARIDRASLLIDVRKSLALPSRRLFGKRMLTLGGLAMLTGCTLRDDASVDDFLEKVSRANDRVQAWLFGPTRLAPTYAEADITRPFPFNAFYGIDEVPRVDADGFRLAVSGLVTGQRSWSLPALYALPHAEQITRHICVEGWSAIGRWGGTPFREFLRRVGADTSAKYVGFKCADDYYESIDMATALHPQTLLAFEYDGKRLPPEYGFPMKLRMPTKLGYKNPKHIVEIFVTNAYPGGYWVDQGYNWFGGS
>NZ_CP008911.1|WP_160974052.1|3842431_3842644_-|hypothetical-protein
MLTKCGRHAAHVIIRVRLRVRSSPSVMFAAARSDLSFRTPPFPVIPVFPAPLAGGRIARRSTARRFTRAG
>NZ_CP008911.1|WP_004192284.1|3841492_3842428_-|EamA-family-transporter
MTPFDRFLAFVARHPPRLPQSRSGRVALALVFIYFAWGSTYLALHVALESFPPLLLSGLRNLLAGVGLFVFAMRRRPVRPTLVEIRNAALVGTMLVTMSSGLIALGMRTVSSGSAAVMVATVPLFATVIASVAGRRVTGGEWGAVALGMVGIVVLNSGGPSSPGSTLGSITVLAGALFWAGGAHLAARLALPHDLFLSTALQIGLGGAASTCIAWVLGERIGHVAWVPGAAFVYLMLAGTMAAYVAYGYLIRHTSPIIASSCMYVNPVVAVALGALLLGEPVTAATVIATIAILGSVGLSFVFDPARRRAQ
>NZ_CP008911.1|WP_004554502.1|3851812_3853096_+|EAL-domain-containing-protein
MPKTQGFSPESLISQFTRCDAGWCVRYHDVTLASAFQPVISITHKRVVGYEALARATDANGAPISPDTLFARAQARGETILLDRLTRCLHVANFAAQDTGACWLFLNVLPQMFDAGIAPGAFIEALCAHFALPPTRVVLEVIEQPSRNEVALARTIDMIQHGDFLIAVDDFGTGFSNFDRIWQIKPDIVKLDRSILERSLAASDAHRIIHHLVTMLHHAGTMVLAEGVENEDALQILMDADVDFVQGFCFGRPAPSLEHARRAAPARIEAAWRRFAERTKARCGDVVHPGFDTIERIMLTGAADYAQTRNLRDAAQRLLTSPIVRRVFVAEANGEQVEPSVAIETPDAPSATARRLAPLLPELHCNWSRRAYFQRAIAAPGRVALMGPHFSLTDGRDCYTAAVAIHLGTTLKVFCVDFDFSSYGDGR
>NZ_CP008911.1|WP_004193488.1|3853509_3853914_-|aminoacyl-tRNA-hydrolase
MTLRYAFSPDEVELTAVRAQGAGGQNVNKVSSAIHLRFDIRASSLPDDVKARLFARADQRITREGVIVIKAQEYRTQEKNRAAALARLDTLIRSAGVTPRKRVATRPTRASKERRLAEKGRRSEVKSGRGRVVE
>NZ_CP008911.1|WP_024431404.1|3853910_3856607_-|AAA-family-ATPase
MSVVDERFAWTGGLADRLPEPADFGLALAEGFARRIGMLSRRVGASAAAARWAARAAFAASRATAAGHVCVALRALAQRYDEPYDDVRAALAASGVTAFDGIVRGGECPLVVDRDGRLYLARYFEYETRLANALVERSRCGGAPAGGADALSPDALGERLVRYFGPQKERGVDWQRVAALIALTGRVTIVSGGPGTGKTTTVVGVIACLLDAHPELRIALAAPTGKAAQRMQEALHARAGSLPAELAARLPRTSCTLHRLLGGGPGGRFAHHRDNPLPYDLVVVDEASMIDVALAAHLLDALAPNARLVLLGDKDQLAAVEAGAVFAELSARPAFSPATCATIARALGVGEAEFVAALPDGFVVQAAGAERVADARAAAADMDAAARGAAGAAAAAARATAAAAARMTTAAAAATGGAPESAAQRAPAPHAGRRGGGRASNRTVDDAQGSLFAFDDDAFGVGTSGGEPGAGAQGAGRRDGGAPSLDGPHAGHRDGGASPGVAHSRRDAFDARARSGPADVSDLENAARAYAPAGAAGPADSPADASFVEPAAWIEADELAWLDNAVFSFSEGASANAEADGRRSAAATATDADARTAPPVAREATAPTPRETARSDGSAVAPLTDCVVWLERNYRFGLDSPIGRLSLAIRRGAVQDALDALSTQDDAAARFSDDGGATLSAATVEQLARGFAGYAAALRDALATPEPDALPLFDVLNRFRVLCATRTGARGAEEVNARMAAEVRRAVRVPLALGAHWFAGRPVMVTRNDYALGLFNGDIGIALPGARGALRVWFRGADGRARAVSPAALPPHDTAFALTVHKSQGSEFDDAALILPASFNRVLSRELVYTAITRARARVQVIGSRAVLALAIATRTARDSGLAARIADALRARQEGAR
>NZ_CP008911.1|WP_024431403.1|3856603_3860416_-|exodeoxyribonuclease-V-subunit-beta
MSHVAPSGPSASELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVVTFTKAATAELHERIRARLAQLAHALDTGDDGGDPFIARLFETTLAPERGLDPQTAAKRVRRALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPVAAAYPTFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESAARAHFDTAAAIWRDERGVLGTLLADAQPSLNQRSHKPEAVSEALDAWARYFEQASAVAALPRAALKLTQSALEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDAAPAELAQRKRTRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGPLFLVGDPKQAIYSFRAADLHTYLAARARAAARYTLAVNQRSTPAIVDACNRVFGANPRAFVLGGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRIWTLPAGDDVLTKRDAQRHAAHACAAEIARLMRGAREHAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFATIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAEQDGIDAAARGASGNGGGARAASAGAPAPSPADADAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIAERLMAGADGERRVTDVNHLAELTQARASAQPGIAPTLRWLAAQRLEGGGDDAQLRLESDRNLVQIVTVHKSKGLEYAIVFCPFLNDGGLREPAGSGLPDAREYHDESGCAVLHYGCDDEAAERASREAVREQAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFDAWLKEPPEDAELAERWQALAGGPVTLGALPVPAHREPLAAGHDAQATRAARRATRGLRDAWRIASFSSLASAIARDESGIARAADDEMRPDHDALAAALGADALEPPDAAAAIAPAPAAAPRELAEDDILAFPRGAAAGECLHRLLELSNFADASTWPPAALRALHERPVEAELALAERLPAMMTRLVADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYPDVALEAGTLAGFVKGFIDMIVEHDGRFWIVDWKSNHLGTTPEAYGERALDAAMAHHAYHLQALLYMVALHRYLRVRMHGYDYDAHIAGYLYVFVRGVRPDWRNGGASAGVHARRPARALIEALDALMREGDA
>NZ_CP008911.1|WP_009980311.1|3860412_3863757_-|exodeoxyribonuclease-V-subunit-gamma
MLHLFYSNRHETLADALLDDLAFASDGAGPWAAQQVIVPSAALRRRLELDLAKRHGVCANVRFSYLAQWLWAQIGEVLTVPAHSPFAPDRLVWRCYRLLSDHGAAPWRASPRLAAYLAAADAPMRHELAHRIATVFDHYLTYRPEWLAQWQDGESIFALEGAPRHGGEAARDDEAWQAALWRALLAELSDSGMPPAHRFLREARAFDPDVIARARAKWPDAVSVFALPTMPPLHIALLRELSRWIDVRIYALNPCREFWFDIVTAARAESLDAADRLDYQEVGHPLLAEWGRQTQAQLHMLHELTESAAASDASRYADNPAPTWLARVQNAILDLQPEAALGEPPAERGVEVHVCHSLARQLEVLHDRLLAWFDADPSLAPSDVLVAMPDLATAGPLIDAVFGTPAGADAARIPYRITGLPPSQANPVARVLLDWLALPERDVGAPELVEWLRADAVAARYGIDATALETVQAWLAASGARRGLAPDAAEPPNPAVPAPRHTFADALTRLFLGYAMPDGAAPVSTWLPIAGAEGGEAELLGRLARFTDDLDGFARRIARDLTPQGWGDVFADALARFFDSGPAFADALSGVRDALDAMLAAMAEGAAGAALPAAVVRAGLAAALDDPARGGVPWGGVTFSSLTSLRGLPYRIVCLIGMDDGVLPSLARADEFDLMAVFAKLGDRQRRDDERNLFLDLLLAARERLLIAYTGRSIRDNAPLPPAALVDELLDHLAAASAGPDAPPDAVDAARRAFVIEHPLQPFSAEYFAPGGALFTYDASRATLARLLAEGARAQARPFFAAPLPAEPEQPVAFADFERFWRHPARSLLRARLGIVLLDAQAELVDTEPFELDYAGSDALAERVLPLLIETADAAAFEHALRVADASPEVPGGATGAVRRDHALDALAQLAGNVRRALADGATRVPFAFDVAPAWPAAGDARWFGEHDAALAAAATREPLRLHGALARLTAAGQVIYRYARPGARDYLAAWLAHLVYCAIDPGGPRRTLWFGSGDTFEFAPVAAPLEQLAPLAALFRAGRRMPLAFFPRSAWALVSESESKAAGVWINDRVAGEADDASLALAWRGANPSLDEPFGALAHLVFDPLVEHLRRAS
>NZ_CP008911.1|WP_004521871.1|3864416_3866693_+|membrane-protein
MRYSVEIRKFFYSQYFFGGLRIALGVSLPAVLSLAVLHDRELGFTIATGALGACVVDMPGPLKYKHNEMLACSVIGFFSALATGLATPNIFALWLTIVPLTFVLSLIVVYGNRWPQISFATLFMMVMTLEEKFTPLQALVNASWILAGGLWYTYWATIVSRWQARRIEQQALAESLFACASYLLARADFYDLDADLDECYRNLVARQITAVETQETARDIVLRNLPKLRRGKLDPGRTMMFNLFINSVDLHEMFVGAHTDYPLVRSTFGGSDLMIFYRDLIRKAAADLEEIGFAVLENRLPHSRISVKAELRAIEYEIELMRKKQFAATHPEAYAAVLATFRRIWSATRLIDKMRRNLSGSADAQRTELKIDKALTRFLQKRRMSPLLIFSNLNMGSPSLRHALRVTIAVAVGFWLGRLLPLTNAYWIVMTSIIILKPGYSLTKQRNAQRIVGTLIGCAASLALIYTVHEPHVLIAIMFGSMVMSYSLLLFNYAASVVFTSSYVLLLFHLLAPGNMRIIGERAIDTVVGCMIAIAASRLFPYWEYRAIGKLVADALATTRKYFEATWRAGRGKAAPAVPAADGAAAVPAVAAVVDAVAPGLDGDYQYRLARKNVHIAFANLGQAFQRMMLEPKAHQKFVPELNDLLVQTHVLGAQITAAAPLLRHACEQGNPPALERGMAAVREHLEQAEAGVPPPANQAETSKQLTRELDSMVVDAERSDAGADLTHDLKVLAHQCKQMLASSLLIRKDASVIRLPE
>NZ_CP008911.1|WP_004192878.1|3866689_3866881_+|hypothetical-protein
MSRPPPPFLSTVSRRARTQGFPDYCPRASIGMIYPAPSCLYNFSSASAGPHRPADDTNHSETR
>NZ_CP008911.1|WP_004526507.1|3866877_3868242_+|amino-acid-permease
MKNLQRHLSARHIRFLALGSAIGTGLFYGSASAIRLAGPAVILAYIVGGAAVYMVMRALGEMAVREPVPGSFGHYATENLGPFAGFVTGWTYTLEMVIVAIADITAFGIYMGFWFPHVPQWIWVLAIVAIICGLNLCHVKVFGELEFWLSIVKVGAIVAMIGGGAAILFTGMRLGSGGAPSLANLWSHGGFLPNGVGGLVASLSVVIFAYGGIEVIGMSAGEAKEPERAIPRAINAVPMRILLFYVLTMIVLMSIFPWTGVGANGSPFVQIFSALGVRSAAEILNLVVISAAISAINSDIFGAGRMMYAMALQGQAPRALAAMSARGVPWVTVLVMAGALLVGVVLNYLMPKDVFLMVAASATFATVWVWLMILLSQVAMRRRLGAAEVAALKFKVPFWPVGPALTIAFMAFVIAMLGYFDDTRVALFVGAAWLAILALVFYTRIRPRLAAVAR
>NZ_CP008911.1|WP_004193167.1|3868393_3868573_-|hypothetical-protein
MNDPRSKKNPVFGVAILIVVVIALVIGTILYNAISQKHEYDEAHPHAASAASAASAQHG
>NZ_CP008911.1|WP_004191162.1|3868569_3868689_-|hypothetical-protein
MRIARKKTDESRRAQRTAVRMRLRVECRLDEFLMERDRR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

257971 : 268923

Agrobacterium_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004196461.1\|257971_260272_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1
WP_004194131.1\|260268_260583_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196460.1\|261115_261319_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_024431667.1\|261448_263053_-	multicopper oxidase family protein	NA	NA	NA	NA
WP_009929279.1\|263065_263248_+	hypothetical protein	NA	NA	NA	NA
WP_004189552.1\|263220_264480_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_004189780.1\|264747_265326_+	pseudouridine synthase	NA	NA	NA	NA
WP_071810810.1\|265588_265807_+	hypothetical protein	NA	NA	NA	NA
WP_004530837.1\|265998_266508_+	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.5e-13	41.2
WP_004197486.1\|266808_268923_+	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7

DBSCAN-SWA_2

620970 : 671037

Burkholderia_virus(16.67%)

transposase,integrase,protease

attL 614027:614044|attR 675335:675352

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
614027:614044	attL	NA	NA	NA	NA
WP_004552423.1\|620970_621597_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_004552424.1\|621726_622428_-	hypothetical protein	NA	NA	NA	NA
WP_024431663.1\|623090_623558_+	hypothetical protein	NA	NA	NA	NA
WP_009936298.1\|623579_623903_+	hypothetical protein	NA	NA	NA	NA
WP_009936297.1\|623925_625314_+	hypothetical protein	NA	NA	NA	NA
WP_154220288.1\|626188_626356_+	hypothetical protein	NA	NA	NA	NA
WP_024431664.1\|626401_626731_+	helix-turn-helix transcriptional regulator	E5E3S9	Burkholderia_phage	1.8e-20	45.0
WP_122648546.1\|626684_627686_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_085955848.1\|628030_629190_-\|transposase	IS3-like element ISBps2 family transposase	A4JX31	Burkholderia_virus	5.0e-78	99.3
WP_004522844.1\|629322_629640_+	hypothetical protein	NA	NA	NA	NA
WP_004522845.1\|629812_630064_+	hypothetical protein	NA	NA	NA	NA
WP_024431213.1\|630252_631833_-	hydrolase	NA	NA	NA	NA
WP_024431212.1\|632176_632908_+	dienelactone hydrolase family protein	NA	NA	NA	NA
WP_080296862.1\|633997_635191_+	sigma-70 family RNA polymerase sigma factor	F4YCU2	Synechococcus_phage	7.1e-27	32.5
WP_038723947.1\|635192_636806_+	AAA family ATPase	NA	NA	NA	NA
WP_038723946.1\|636780_638121_-	DUF1998 domain-containing protein	NA	NA	NA	NA
WP_038723948.1\|638492_641582_-	DNA helicase	NA	NA	NA	NA
WP_080251283.1\|641716_643348_-	DNA (cytosine-5-)-methyltransferase	A0A218MKT0	uncultured_virus	2.6e-19	27.5
WP_144399924.1\|643553_644006_-	hypothetical protein	NA	NA	NA	NA
WP_024431209.1\|644094_644385_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024431208.1\|644870_646544_-\|integrase	integrase	NA	NA	NA	NA
WP_158332747.1\|646866_648489_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_029671185.1\|648485_649685_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_004534302.1\|649940_650495_-	single-stranded DNA-binding protein	C5IHK5	Burkholderia_virus	2.6e-48	87.7
WP_004195190.1\|650608_651796_-	MFS transporter	NA	NA	NA	NA
WP_004526066.1\|652009_654877_+	excinuclease ABC subunit UvrA	A0A1B1IVR3	uncultured_Mediterranean_phage	2.3e-305	55.0
WP_014917426.1\|655095_656181_+	membrane protein	NA	NA	NA	NA
WP_004522850.1\|656479_657361_-	formyltetrahydrofolate deformylase	M4QRX9	Synechococcus_phage	4.3e-13	35.7
WP_004537848.1\|657412_658270_-	DUF4743 domain-containing protein	NA	NA	NA	NA
WP_004522852.1\|658282_658897_-	LysE family translocator	NA	NA	NA	NA
WP_020850417.1\|658990_659554_-	adenine phosphoribosyltransferase	A0A1V0SKE5	Klosneuvirus	1.5e-27	41.1
WP_004195204.1\|659637_661647_-	potassium efflux system protein	NA	NA	NA	NA
WP_004530936.1\|661774_662758_+	KpsF/GutQ family sugar-phosphate isomerase	A0A2P0VNK5	Tetraselmis_virus	1.7e-42	37.5
WP_004200146.1\|662757_663297_+	HAD family hydrolase	E3T535	Cafeteria_roenbergensis_virus	8.4e-12	28.0
WP_004522855.1\|663302_663917_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA
WP_004195213.1\|663935_664601_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA
WP_004195214.1\|664597_665374_+	LPS export ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	5.1e-18	28.1
WP_004195216.1\|665542_667051_+	RNA polymerase factor sigma-54	NA	NA	NA	NA
WP_004195219.1\|667200_667560_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA
WP_004534308.1\|667792_668302_+	PTS IIA-like nitrogen regulatory protein PtsN	NA	NA	NA	NA
WP_004195225.1\|668430_669399_+	HPr kinase/phosphorylase	NA	NA	NA	NA
WP_004195227.1\|669484_670378_+	RNase adapter RapZ	A0A0R8VB27	Thermobifida_phage	4.4e-05	30.8
WP_004195230.1\|670404_671037_+\|protease	ATP-dependent protease	NA	NA	NA	NA
675335:675352	attR	NA	NA	NA	NA

DBSCAN-SWA_3

1040915 : 1098486

Vibrio_phage(12.5%)

portal,transposase,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004203414.1\|1040915_1041452_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_024431128.1\|1041461_1042805_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	3.7e-40	28.8
WP_004198315.1\|1043222_1043765_-	response regulator transcription factor	NA	NA	NA	NA
WP_004525866.1\|1043784_1045065_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_024431127.1\|1045082_1045325_-	cysteine-rich CWC family protein	NA	NA	NA	NA
WP_004200214.1\|1045649_1046549_+	acetylglutamate kinase	NA	NA	NA	NA
WP_024431126.1\|1046545_1047349_+	pyrimidine 5'-nucleotidase	NA	NA	NA	NA
WP_024431125.1\|1047315_1048005_+	nucleoid occlusion factor SlmA	NA	NA	NA	NA
WP_004198305.1\|1048354_1049500_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_004198304.1\|1049496_1050111_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
WP_004523086.1\|1050122_1051436_+	AmpG family muropeptide MFS transporter	NA	NA	NA	NA
WP_004535313.1\|1051425_1052478_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_024431124.1\|1052851_1053796_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004534096.1\|1054007_1055072_+	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.3e-80	45.8
WP_004533598.1\|1055409_1056873_+\|transposase	IS1182-like element ISBma2 family transposase	A0A1X9I5T2	Streptococcus_phage	8.8e-80	38.6
WP_004190029.1\|1057035_1057806_-	exodeoxyribonuclease III	R4TWA8	Phaeocystis_globosa_virus	3.4e-30	33.8
WP_004523089.1\|1057837_1058677_-	polyphosphate kinase	NA	NA	NA	NA
WP_024431151.1\|1058803_1060276_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_004525859.1\|1060278_1061769_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_004189769.1\|1061881_1062181_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_004189550.1\|1062545_1063589_+	rod shape-determining protein	NA	NA	NA	NA
WP_004554072.1\|1063708_1064782_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_004523092.1\|1064778_1065291_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004525858.1\|1065474_1067886_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_004189171.1\|1067897_1069046_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_004523094.1\|1069604_1070381_-	sel1 repeat family protein	NA	NA	NA	NA
WP_004189570.1\|1070377_1071163_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
WP_004189793.1\|1071584_1072037_-	6-carboxytetrahydropterin synthase QueD	A0A088FAL2	Vibrio_phage	7.6e-14	30.8
WP_004534354.1\|1072056_1072689_-	7-carboxy-7-deazaguanine synthase	R4TAH8	Halovirus	7.3e-07	31.5
WP_004190026.1\|1072782_1073517_-	7-cyano-7-deazaguanine synthase QueC	A0A1B0Z0B4	Vibrio_phage	1.6e-50	42.5
WP_004189647.1\|1073985_1074669_-	response regulator	NA	NA	NA	NA
WP_004523096.1\|1074669_1077078_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_004188929.1\|1077079_1077670_-	DUF4390 domain-containing protein	NA	NA	NA	NA
WP_004189046.1\|1077666_1079076_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_004189409.1\|1079547_1080405_-\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_009969943.1\|1080514_1081150_-	LysE family translocator	NA	NA	NA	NA
WP_004537742.1\|1081270_1082254_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.3e-07	38.0
WP_004525852.1\|1082285_1082789_-	peptide deformylase	A0A067XQZ3	Caulobacter_phage	2.1e-12	34.3
WP_004553745.1\|1083017_1084208_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	2.0e-21	39.2
WP_004190199.1\|1084267_1084639_+	thioredoxin family protein	NA	NA	NA	NA
WP_004537740.1\|1084849_1087459_+	DNA topoisomerase III	A0A2P1ELA0	Moumouvirus	2.2e-17	25.6
WP_004189230.1\|1087680_1088736_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004525849.1\|1089174_1090191_+	D-2-hydroxyacid dehydrogenase family protein	NA	NA	NA	NA
WP_004189208.1\|1090311_1091181_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_004200732.1\|1091218_1091623_-	PaaI family thioesterase	NA	NA	NA	NA
WP_133670743.1\|1092237_1092900_-	hypothetical protein	NA	NA	NA	NA
WP_009972519.1\|1092920_1094129_-	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	2.3e-17	27.2
WP_009972518.1\|1094327_1094645_-	transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.9
WP_009972517.1\|1094652_1094985_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	1.7e-18	51.9
WP_122657108.1\|1095092_1096252_-\|transposase	IS3-like element ISBps2 family transposase	A4JX31	Burkholderia_virus	2.5e-77	98.6
WP_004200731.1\|1096557_1097040_+	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_004523107.1\|1097036_1097321_+	hypothetical protein	NA	NA	NA	NA
WP_038724261.1\|1097394_1098486_-\|portal	phage portal protein	A4JWV0	Burkholderia_virus	6.8e-194	92.8

DBSCAN-SWA_4

1354649 : 1365878

Shigella_phage(20.0%)

integrase

attL 1352054:1352071|attR 1368657:1368674

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1352054:1352071	attL	NA	NA	NA	NA
WP_004524472.1\|1354649_1356737_+	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	1.9e-99	35.8
WP_004552489.1\|1357059_1357959_-	cytochrome	NA	NA	NA	NA
WP_076804979.1\|1358790_1358970_-	hypothetical protein	NA	NA	NA	NA
WP_004553012.1\|1359141_1359729_+\|integrase	site-specific integrase	A0A0S2SYQ7	Pseudomonas_phage	9.1e-44	50.0
WP_009932253.1\|1359780_1360101_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	1.0e-12	58.6
WP_009922658.1\|1360108_1360426_+	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.0
WP_029671275.1\|1360425_1361343_+	DUF4935 domain-containing protein	A4PE40	Ralstonia_virus	5.2e-46	40.6
WP_045141125.1\|1361596_1362139_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	1.4e-46	55.2
WP_009932249.1\|1362396_1362849_+	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	2.3e-31	58.8
WP_004530408.1\|1362848_1363928_+	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.2e-160	99.0
WP_004525721.1\|1364084_1364333_+	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.0e-41	97.6
WP_004195754.1\|1365233_1365878_+	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	5.7e-07	30.4
1368657:1368674	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1587402 : 1604253

Pseudomonas_phage(33.33%)

plate,transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004199890.1\|1587402_1587924_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.9e-21	51.0
WP_102804204.1\|1589667_1590787_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_004535005.1\|1591050_1592121_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_009932052.1\|1592127_1592928_-	hypothetical protein	NA	NA	NA	NA
WP_004539222.1\|1593362_1593701_+	DUF4102 domain-containing protein	Q8W6M6	Sinorhizobium_phage	2.4e-17	49.0
WP_004521948.1\|1594195_1594981_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004521949.1\|1594977_1596324_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521950.1\|1596432_1597047_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004531875.1\|1597421_1598093_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521952.1\|1598129_1598648_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004521953.1\|1598664_1600155_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004527837.1\|1600227_1600731_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004204912.1\|1600788_1601271_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004527836.1\|1601350_1603189_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004200010.1\|1603152_1604253_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_6

1929333 : 1938578

Hokovirus(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004527678.1\|1929333_1931286_+	molecular chaperone DnaK	A0A1V0SH73	Hokovirus	2.7e-148	49.2
WP_004522147.1\|1931552_1932683_+	molecular chaperone DnaJ	A0A1V0SBY2	Catovirus	1.7e-22	27.6
WP_004194350.1\|1932716_1934723_+	bifunctional anthranilate synthase component I family protein/class IV aminotransferase	S4VT78	Pandoravirus	9.7e-53	35.0
WP_004194137.1\|1934906_1935722_-	3-methyl-2-oxobutanoate hydroxymethyltransferase	A0A0N7HVJ8	Ostreococcus_lucimarinus_virus	8.8e-37	33.3
WP_004532195.1\|1935786_1936470_-	deoxynucleoside kinase	A0A249XZR7	Enterococcus_phage	2.0e-05	26.0
WP_004527677.1\|1936466_1936994_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA
WP_024431172.1\|1937030_1938578_-	polynucleotide adenylyltransferase PcnB	H7BUW3	unidentified_phage	4.3e-24	31.2

DBSCAN-SWA_7

2548269 : 2647026

109

uncultured_Caudovirales_phage(22.73%)

terminase,protease,tRNA,tail,integrase,head,portal,capsid,plate

attL 2542476:2542498|attR 2617914:2617936

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2542476:2542498	attL	NA	NA	NA	NA
WP_004192783.1\|2548269_2549796_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.8e-84	35.6
WP_004532142.1\|2549888_2550993_-	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	2.2e-06	37.1
WP_004191649.1\|2551353_2553048_-	single-stranded-DNA-specific exonuclease RecJ	A0A0K2FM92	Brevibacillus_phage	1.1e-28	27.3
WP_004193226.1\|2553063_2554140_-	hypothetical protein	NA	NA	NA	NA
WP_004191984.1\|2554706_2555960_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_004195923.1\|2555952_2556702_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	2.2e-34	38.3
WP_004527360.1\|2556706_2557495_+	TatD family hydrolase	NA	NA	NA	NA
WP_011325704.1\|2557547_2560076_+	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA
WP_004527358.1\|2560112_2560940_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_004192790.1\|2561195_2562857_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.9e-150	52.0
WP_004193658.1\|2562853_2563708_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	2.3e-48	40.9
WP_004192585.1\|2563811_2565095_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	6.4e-151	62.6
WP_004191789.1\|2565186_2565618_+	cell division protein FtsB	NA	NA	NA	NA
WP_004524733.1\|2565840_2566188_-	hypothetical protein	NA	NA	NA	NA
WP_004191092.1\|2566271_2567222_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_004524734.1\|2567260_2567785_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_004191514.1\|2567994_2568813_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004192762.1\|2568967_2569858_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_004193008.1\|2570104_2570935_+	PHP domain-containing protein	NA	NA	NA	NA
WP_004192132.1\|2570999_2571629_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_004192745.1\|2571727_2572393_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_004191887.1\|2572401_2573604_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_004524736.1\|2573600_2574215_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004191516.1\|2574259_2575162_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_004524737.1\|2575272_2576415_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_004193059.1\|2576419_2577196_+	MBL fold metallo-hydrolase	U5PVD0	Bacillus_phage	3.3e-09	26.6
WP_004532149.1\|2577922_2579110_-	cupin domain-containing protein	NA	NA	NA	NA
WP_004524740.1\|2579178_2579724_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_004193649.1\|2579703_2581002_-	hypothetical protein	NA	NA	NA	NA
WP_038708139.1\|2580988_2583670_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	4.2e-27	24.1
WP_024430959.1\|2583829_2585131_+\|integrase	integrase family protein	C7BGE7	Burkholderia_phage	2.6e-147	58.7
WP_009890227.1\|2585081_2585324_-	AlpA family phage regulatory protein	C7BGF0	Burkholderia_phage	9.3e-19	59.2
WP_004555249.1\|2585332_2585806_-	hypothetical protein	B5TA88	Burkholderia_phage	2.3e-05	71.4
WP_004555250.1\|2585814_2586144_-	hypothetical protein	NA	NA	NA	NA
WP_004555251.1\|2586257_2587574_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_004555252.1\|2587573_2588023_-	hypothetical protein	NA	NA	NA	NA
WP_004534172.1\|2588019_2588625_-	hypothetical protein	NA	NA	NA	NA
WP_004534202.1\|2588621_2588957_-	hypothetical protein	NA	NA	NA	NA
WP_128972336.1\|2589008_2589197_-	NlpBDapX lipoprotein	NA	NA	NA	NA
WP_004555253.1\|2589331_2589820_-	hypothetical protein	NA	NA	NA	NA
WP_004555254.1\|2589773_2590274_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_024430958.1\|2590390_2590600_+	hypothetical protein	NA	NA	NA	NA
WP_009944042.1\|2590686_2591217_+	hypothetical protein	C7BGG0	Burkholderia_phage	4.4e-29	46.8
WP_004555255.1\|2591230_2591563_+	hypothetical protein	NA	NA	NA	NA
WP_143293908.1\|2591590_2592106_-	hypothetical protein	NA	NA	NA	NA
WP_004555256.1\|2592164_2592728_+	hypothetical protein	NA	NA	NA	NA
WP_024430956.1\|2592791_2592971_+	hypothetical protein	NA	NA	NA	NA
WP_004555257.1\|2593101_2593572_+	hypothetical protein	NA	NA	NA	NA
WP_004555258.1\|2593691_2596184_+	virulence protein E	A0A2D1GN57	Marinobacter_phage	4.7e-97	41.8
WP_004533678.1\|2596401_2596989_+	hypothetical protein	NA	NA	NA	NA
WP_154220270.1\|2597428_2597908_+	hypothetical protein	NA	NA	NA	NA
WP_024430954.1\|2598125_2598695_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_024430953.1\|2598657_2600646_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	2.1e-180	53.0
WP_004538508.1\|2600656_2600863_+	hypothetical protein	NA	NA	NA	NA
WP_004538509.1\|2600859_2602353_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	3.2e-133	51.5
WP_024430952.1\|2602349_2603450_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	2.5e-47	36.3
WP_024430951.1\|2603476_2603821_+\|head	head decoration protein	NA	NA	NA	NA
WP_080251236.1\|2603854_2604880_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	1.7e-109	58.9
WP_024430949.1\|2604881_2605172_+	hypothetical protein	NA	NA	NA	NA
WP_024430948.1\|2605173_2605704_+\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	2.7e-10	27.3
WP_024430947.1\|2605693_2606227_+	hypothetical protein	Q9JML9	Wolbachia_phage	1.4e-22	39.5
WP_024430946.1\|2606229_2606910_+\|plate	phage baseplate assembly protein V	Q9JML8	Wolbachia_phage	5.3e-19	33.8
WP_024430945.1\|2606975_2607173_+	hypothetical protein	NA	NA	NA	NA
WP_024430944.1\|2607169_2607514_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	3.6e-24	50.0
WP_024430943.1\|2607510_2608404_+\|plate	baseplate J protein	D5LGZ3	Escherichia_phage	8.4e-49	40.7
WP_024430942.1\|2608396_2608972_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	3.5e-32	48.4
WP_024430941.1\|2608959_2610765_+\|tail	tail fiber protein	A4JWS9	Burkholderia_virus	9.0e-151	68.8
WP_024430940.1\|2610778_2611465_+\|tail	tail assembly chaperone	E5E3Q6	Burkholderia_phage	1.5e-58	58.6
WP_004538523.1\|2611528_2612698_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	6.9e-160	72.2
WP_004538524.1\|2612708_2613212_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	3.3e-42	51.9
WP_143293909.1\|2613561_2614821_+	hypothetical protein	NA	NA	NA	NA
WP_024430938.1\|2615067_2615370_+\|tail	phage tail assembly protein	V5YST8	Pseudomonas_phage	4.3e-05	35.9
WP_024430937.1\|2615457_2617857_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.2e-62	35.2
WP_024430936.1\|2617865_2618747_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	4.6e-31	36.4
2617914:2617936	attR	NA	NA	NA	NA
WP_024430935.1\|2618721_2618928_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	6.9e-15	59.7
WP_024430934.1\|2618937_2619990_+	phage late control D protein	A0A2H4JBF6	uncultured_Caudovirales_phage	1.3e-77	43.9
WP_024430933.1\|2620065_2620260_+	hypothetical protein	NA	NA	NA	NA
WP_024430932.1\|2620252_2620750_+	lysozyme	A4JX20	Burkholderia_virus	9.7e-71	81.8
WP_029670545.1\|2620749_2621295_+	lysozyme	Q8W6S5	Burkholderia_virus	1.2e-77	89.5
WP_024430930.1\|2621437_2622226_+	DNA adenine methylase	Q8W6S4	Burkholderia_virus	4.4e-150	96.2
WP_024430929.1\|2622261_2622984_-	hypothetical protein	A4PE26	Ralstonia_virus	2.9e-31	45.3
WP_038717509.1\|2622990_2623593_-	hypothetical protein	NA	NA	NA	NA
WP_076888415.1\|2623934_2624444_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	6.1e-20	39.9
WP_014917526.1\|2624440_2624866_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	5.4e-14	48.3
WP_014917527.1\|2624925_2625207_-	hypothetical protein	NA	NA	NA	NA
WP_009941413.1\|2625203_2625671_-	hypothetical protein	C7BGE3	Burkholderia_phage	1.5e-49	61.7
WP_024430925.1\|2625750_2625975_+	hypothetical protein	Q8W6R8	Burkholderia_virus	2.0e-23	86.4
WP_024430924.1\|2626312_2627290_-	hypothetical protein	NA	NA	NA	NA
WP_076823393.1\|2627286_2627958_-	hypothetical protein	NA	NA	NA	NA
WP_154220269.1\|2628874_2629030_-	hypothetical protein	NA	NA	NA	NA
WP_076853222.1\|2629604_2630510_-	DUF3037 domain-containing protein	NA	NA	NA	NA
WP_122876817.1\|2630506_2631343_-	hypothetical protein	NA	NA	NA	NA
WP_009951418.1\|2631593_2632733_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_024430922.1\|2632729_2633563_+	hypothetical protein	NA	NA	NA	NA
WP_080251235.1\|2633762_2634002_-	DNA mismatch repair protein	NA	NA	NA	NA
WP_004191077.1\|2634838_2635018_+	hypothetical protein	NA	NA	NA	NA
WP_004538129.1\|2635201_2635474_+	hypothetical protein	NA	NA	NA	NA
WP_004191664.1\|2635753_2636557_-	inositol monophosphatase	NA	NA	NA	NA
WP_004532151.1\|2636600_2636852_+	hypothetical protein	NA	NA	NA	NA
WP_004524746.1\|2636857_2637763_+	RNA methyltransferase	NA	NA	NA	NA
WP_004193377.1\|2637953_2638739_+	serine O-acetyltransferase	NA	NA	NA	NA
WP_004550230.1\|2639071_2639872_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_004193779.1\|2639896_2640388_-	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	4.2e-10	33.3
WP_004191635.1\|2640468_2641044_-	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	5.3e-12	39.3
WP_004195907.1\|2641100_2641823_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004192752.1\|2642054_2643452_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.8e-42	33.8
WP_004527343.1\|2643499_2644438_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
WP_004193249.1\|2644541_2645513_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_004538130.1\|2645556_2647026_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA

DBSCAN-SWA_8

3612411 : 3685156

Klosneuvirus(14.29%)

plate,coat,tRNA,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004204967.1\|3612411_3615036_-\|tRNA	alanine--tRNA ligase	A0A1V0SK38	Klosneuvirus	5.5e-80	39.2
WP_004204969.1\|3615638_3616859_+	CoA transferase	NA	NA	NA	NA
WP_004534928.1\|3617187_3617397_-	hypothetical protein	NA	NA	NA	NA
WP_004193654.1\|3617676_3619386_+\|tRNA	glutamine--tRNA ligase/YqeY domain fusion protein	A0A222YZ70	Escherichia_phage	8.8e-188	57.5
WP_004526798.1\|3619764_3620247_-	NUDIX hydrolase	A0A2I6PFL2	Proteus_phage	5.8e-20	41.3
WP_004193860.1\|3620265_3620652_-	hypothetical protein	NA	NA	NA	NA
WP_004531183.1\|3620939_3623039_-	glycoside hydrolase family 3 protein	NA	NA	NA	NA
WP_004521727.1\|3622964_3623144_+	hypothetical protein	NA	NA	NA	NA
WP_004521728.1\|3623140_3624001_+	M15 family metallopeptidase	NA	NA	NA	NA
WP_024431430.1\|3624044_3625451_-	cytochrome-c peroxidase	NA	NA	NA	NA
WP_004526793.1\|3625684_3627268_+	acid phosphatase	NA	NA	NA	NA
WP_004526792.1\|3627465_3628659_+	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA
WP_004526790.1\|3629277_3630465_+	HlyD family secretion protein	NA	NA	NA	NA
WP_004521735.1\|3630646_3632266_+	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_004526788.1\|3632267_3633977_+	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_004192810.1\|3634280_3634913_-	response regulator transcription factor	NA	NA	NA	NA
WP_004526787.1\|3634913_3636995_-	response regulator	A0A1V0SGR3	Hokovirus	3.9e-12	26.3
WP_004196717.1\|3637405_3638371_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_024431431.1\|3638386_3640798_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_004526784.1\|3640842_3641682_-	molecular chaperone	NA	NA	NA	NA
WP_004526783.1\|3641699_3642224_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_004526782.1\|3642300_3642861_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_004526781.1\|3642913_3643459_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_004526780.1\|3643445_3643631_-	hypothetical protein	NA	NA	NA	NA
WP_004531175.1\|3643716_3643938_-	hypothetical protein	NA	NA	NA	NA
WP_004196705.1\|3644275_3645169_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004538381.1\|3645585_3646872_+	MFS transporter	NA	NA	NA	NA
WP_004526776.1\|3646916_3647900_+	amidohydrolase family protein	NA	NA	NA	NA
WP_004193855.1\|3648367_3648649_+	H-NS histone family protein	NA	NA	NA	NA
WP_004191144.1\|3648903_3649173_-	hypothetical protein	NA	NA	NA	NA
WP_004554454.1\|3650066_3651380_-	divalent metal cation transporter	NA	NA	NA	NA
WP_160973842.1\|3651639_3652263_-	hypothetical protein	NA	NA	NA	NA
WP_153260188.1\|3653218_3653644_-	hypothetical protein	NA	NA	NA	NA
WP_004538387.1\|3654787_3655234_-	hypothetical protein	NA	NA	NA	NA
WP_009951521.1\|3655515_3655776_-	hypothetical protein	NA	NA	NA	NA
WP_009951519.1\|3655990_3656158_+	hypothetical protein	A0A0P0ZBS5	Stx2-converting_phage	9.5e-07	50.0
WP_076851597.1\|3656730_3657444_-	hypothetical protein	NA	NA	NA	NA
WP_076851599.1\|3658366_3658660_-	hypothetical protein	NA	NA	NA	NA
WP_111963064.1\|3659289_3660198_-\|transposase	IS3 family transposase	NA	NA	NA	NA
WP_004526762.1\|3660155_3660407_-	DUF1153 domain-containing protein	NA	NA	NA	NA
WP_004526761.1\|3660537_3661458_-	hypothetical protein	NA	NA	NA	NA
WP_004526760.1\|3661575_3664419_-	hypothetical protein	NA	NA	NA	NA
WP_004526759.1\|3664415_3665291_-	hypothetical protein	NA	NA	NA	NA
WP_024431417.1\|3665292_3668133_-	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	1.4e-20	25.9
WP_004521762.1\|3668145_3668451_-	hypothetical protein	NA	NA	NA	NA
WP_009954547.1\|3668468_3668711_-	hypothetical protein	NA	NA	NA	NA
WP_038724275.1\|3670269_3673605_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_038723994.1\|3673713_3676122_-	DUF2235 domain-containing protein	NA	NA	NA	NA
WP_009930792.1\|3676118_3676712_-	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_004538396.1\|3676708_3677272_-	DUF3304 domain-containing protein	NA	NA	NA	NA
WP_004531150.1\|3677408_3678242_-	DUF4123 domain-containing protein	NA	NA	NA	NA
WP_024431420.1\|3678244_3681052_-	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	5.2e-28	25.1
WP_004521773.1\|3681085_3681313_+	hypothetical protein	NA	NA	NA	NA
WP_004526744.1\|3681572_3681839_+	PAAR domain-containing protein	NA	NA	NA	NA
WP_004526743.1\|3681862_3683278_+	hypothetical protein	NA	NA	NA	NA
WP_024431421.1\|3683305_3685156_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008912

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP008911

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection