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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP008729 Burkholderia multivorans strain DDS 15A-1 chromosome 2, complete sequence 2 crisprs DinG,cas3,csa3,WYL 0 1 2 0
NZ_CP008728 Burkholderia multivorans strain DDS 15A-1 chromosome 3, complete sequence 0 crisprs csa3,PD-DExK 0 0 4 0
NZ_CP008730 Burkholderia multivorans strain DDS 15A-1 chromosome 1, complete sequence 1 crisprs csa3,DEDDh,PD-DExK,cas3,WYL,DinG 0 0 235 0

Results visualization

1. NZ_CP008730
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008730_1 923460-923546 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 13452 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_2 17451 : 18294 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_3 28292 : 55012 19 Leptospira_phage(12.5%) NA NA
DBSCAN-SWA_4 58284 : 61851 5 Cronobacter_phage(50.0%) NA NA
DBSCAN-SWA_5 68140 : 73855 6 Burkholderia_virus(33.33%) NA NA
DBSCAN-SWA_6 79650 : 80613 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_7 93950 : 98257 3 Agrobacterium_phage(50.0%) NA NA
DBSCAN-SWA_8 114340 : 115171 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_9 131320 : 132874 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_10 141842 : 143609 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_11 158802 : 162509 3 Burkholderia_phage(66.67%) transposase NA
DBSCAN-SWA_12 170108 : 171539 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_13 184878 : 187788 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_14 191923 : 192988 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_15 204436 : 211925 8 Bacillus_phage(25.0%) tRNA NA
DBSCAN-SWA_16 221657 : 222758 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_17 226148 : 226445 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_18 231112 : 231943 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_19 238405 : 248999 6 uncultured_Caudovirales_phage(25.0%) tRNA NA
DBSCAN-SWA_20 264466 : 266041 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_21 274545 : 275999 2 Organic_Lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_22 281714 : 289337 7 Klosneuvirus(33.33%) tRNA NA
DBSCAN-SWA_23 325292 : 326021 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_24 336691 : 342875 3 Planktothrix_phage(50.0%) NA NA
DBSCAN-SWA_25 352111 : 357087 4 Bacillus_phage(50.0%) transposase NA
DBSCAN-SWA_26 373175 : 374168 1 Burkholderia_phage(100.0%) transposase NA
DBSCAN-SWA_27 383843 : 386522 2 Corynebacterium_phage(50.0%) NA NA
DBSCAN-SWA_28 392850 : 394956 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_29 403526 : 414973 10 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_30 421642 : 432909 11 Halovirus(16.67%) transposase NA
DBSCAN-SWA_31 447662 : 448430 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_32 452704 : 456368 2 Chrysochromulina_ericina_virus(50.0%) NA NA
DBSCAN-SWA_33 469524 : 470556 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_34 481075 : 487101 2 Virus_Rctr197k(50.0%) NA NA
DBSCAN-SWA_35 497919 : 498693 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_36 521092 : 522571 1 Tetraselmis_virus(100.0%) NA NA
DBSCAN-SWA_37 536777 : 540091 3 uncultured_virus(50.0%) transposase NA
DBSCAN-SWA_38 560886 : 562716 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_39 584509 : 596036 12 Micromonas_pusilla_virus(16.67%) protease NA
DBSCAN-SWA_40 614492 : 618986 4 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_41 632251 : 639618 9 Escherichia_phage(33.33%) protease NA
DBSCAN-SWA_42 656401 : 668078 12 Bacillus_phage(25.0%) NA NA
DBSCAN-SWA_43 674199 : 678763 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_44 683352 : 693357 11 uncultured_Caudovirales_phage(42.86%) transposase NA
DBSCAN-SWA_45 697514 : 701114 6 Sphingobium_phage(50.0%) NA NA
DBSCAN-SWA_46 705239 : 707334 2 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_47 713811 : 715887 1 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_48 741624 : 742920 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_49 748091 : 749102 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_50 756599 : 757613 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_51 766176 : 767626 2 Croceibacter_phage(50.0%) NA NA
DBSCAN-SWA_52 771195 : 774572 3 Bordetella_phage(50.0%) NA NA
DBSCAN-SWA_53 790014 : 800400 9 Bacillus_virus(40.0%) tRNA NA
DBSCAN-SWA_54 804153 : 816218 11 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_55 824955 : 826367 2 uncultured_Caudovirales_phage(50.0%) NA NA
DBSCAN-SWA_56 841674 : 843229 2 Brazilian_cedratvirus(50.0%) NA NA
DBSCAN-SWA_57 852354 : 853749 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_58 857267 : 860883 3 Tupanvirus(50.0%) transposase NA
DBSCAN-SWA_59 867812 : 876010 9 Acidithiobacillus_phage(40.0%) transposase NA
DBSCAN-SWA_60 882034 : 894894 10 Enterobacteria_phage(57.14%) NA NA
DBSCAN-SWA_61 898335 : 899367 1 Only_Syngen_Nebraska_virus(100.0%) NA NA
DBSCAN-SWA_62 904012 : 905992 2 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_63 909707 : 910967 1 uncultured_virus(100.0%) transposase NA
DBSCAN-SWA_64 931485 : 936076 3 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_65 940187 : 945098 5 Bordetella_phage(50.0%) NA NA
DBSCAN-SWA_66 964669 : 965917 1 Aeromonas_phage(100.0%) NA NA
DBSCAN-SWA_67 976637 : 979145 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_68 982220 : 1002893 19 Enterobacteria_phage(25.0%) tRNA NA
DBSCAN-SWA_69 1017455 : 1025656 7 Paramecium_bursaria_Chlorella_virus(33.33%) protease NA
DBSCAN-SWA_70 1032885 : 1033380 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_71 1036570 : 1037530 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_72 1041446 : 1048310 6 uncultured_Mediterranean_phage(75.0%) tRNA NA
DBSCAN-SWA_73 1068250 : 1069611 1 Bacillus_phage(100.0%) transposase NA
DBSCAN-SWA_74 1074605 : 1078876 4 Prochlorococcus_phage(50.0%) NA NA
DBSCAN-SWA_75 1083937 : 1084309 1 Lake_Baikal_phage(100.0%) NA NA
DBSCAN-SWA_76 1096302 : 1097028 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_77 1102391 : 1103780 1 Bodo_saltans_virus(100.0%) NA NA
DBSCAN-SWA_78 1112753 : 1118476 4 Streptococcus_phage(50.0%) tRNA NA
DBSCAN-SWA_79 1126223 : 1127123 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_80 1135222 : 1135639 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_81 1141939 : 1142440 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_82 1147637 : 1151108 3 Staphylococcus_phage(50.0%) NA NA
DBSCAN-SWA_83 1172216 : 1176779 3 Tetraselmis_virus(50.0%) NA NA
DBSCAN-SWA_84 1185193 : 1186312 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_85 1196600 : 1197062 1 Rhizoctonia_fumigata_mycovirus(100.0%) NA NA
DBSCAN-SWA_86 1204104 : 1204611 1 Pelagibacter_phage(100.0%) NA NA
DBSCAN-SWA_87 1223511 : 1231442 5 Burkholderia_phage(25.0%) transposase NA
DBSCAN-SWA_88 1247955 : 1253444 6 Acinetobacter_phage(60.0%) NA NA
DBSCAN-SWA_89 1267983 : 1333619 55 Acinetobacter_phage(22.22%) tRNA,plate,transposase NA
DBSCAN-SWA_90 1338672 : 1349246 4 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_91 1352703 : 1353225 1 Pseudomonas_phage(100.0%) protease NA
DBSCAN-SWA_92 1357768 : 1359932 2 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_93 1371936 : 1372863 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_94 1376434 : 1377256 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_95 1397288 : 1399170 2 Paramecium_bursaria_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_96 1438485 : 1453642 7 Klosneuvirus(20.0%) NA NA
DBSCAN-SWA_97 1457650 : 1458841 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_98 1483020 : 1483707 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_99 1496677 : 1497376 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_100 1507667 : 1557880 41 Acidithiobacillus_phage(16.67%) transposase,integrase attL 1506246:1506263|attR 1530441:1530458
DBSCAN-SWA_101 1579758 : 1616222 38 Acidithiobacillus_phage(25.0%) transposase,integrase attL 1576424:1576439|attR 1623363:1623378
DBSCAN-SWA_102 1627585 : 1629004 1 Pandoravirus(100.0%) NA NA
DBSCAN-SWA_103 1639021 : 1644357 5 Bacillus_thuringiensis_phage(50.0%) NA NA
DBSCAN-SWA_104 1652833 : 1653130 1 EBPR_podovirus(100.0%) NA NA
DBSCAN-SWA_105 1665326 : 1666469 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_106 1672581 : 1674669 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_107 1678885 : 1681813 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_108 1701742 : 1704313 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_109 1722717 : 1724445 1 Staphylococcus_phage(100.0%) NA NA
DBSCAN-SWA_110 1734109 : 1735813 2 Bifidobacterium_phage(50.0%) NA NA
DBSCAN-SWA_111 1738863 : 1741403 2 Pithovirus(50.0%) NA NA
DBSCAN-SWA_112 1748936 : 1751899 2 Staphylococcus_phage(50.0%) holin NA
DBSCAN-SWA_113 1767860 : 1770167 3 Burkholderia_virus(50.0%) NA NA
DBSCAN-SWA_114 1795972 : 1796770 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_115 1802336 : 1807381 2 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_116 1814141 : 1816916 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_117 1824864 : 1929070 104 Burkholderia_phage(69.49%) capsid,plate,holin,head,tRNA,tail,integrase,terminase,portal,transposase,protease attL 1879840:1879887|attR 1916887:1916934
DBSCAN-SWA_118 1935411 : 1937325 3 Vibrio_phage(66.67%) NA NA
DBSCAN-SWA_119 1950274 : 1952199 2 Phaeocystis_globosa_virus(50.0%) NA NA
DBSCAN-SWA_120 1973639 : 1974983 1 Erwinia_phage(100.0%) protease NA
DBSCAN-SWA_121 1979292 : 1986521 8 Mycobacterium_phage(25.0%) transposase NA
DBSCAN-SWA_122 1998740 : 2000381 1 Orpheovirus(100.0%) NA NA
DBSCAN-SWA_123 2022792 : 2024100 1 Burkholderia_virus(100.0%) NA NA
DBSCAN-SWA_124 2028115 : 2030127 2 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_125 2041886 : 2043128 1 Sinorhizobium_phage(100.0%) NA NA
DBSCAN-SWA_126 2055286 : 2056252 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_127 2060993 : 2062301 1 Enterobacteria_phage(100.0%) NA NA
DBSCAN-SWA_128 2078111 : 2079266 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_129 2090733 : 2095098 3 Paramecium_bursaria_Chlorella_virus(33.33%) tRNA NA
DBSCAN-SWA_130 2113624 : 2114557 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_131 2148558 : 2149743 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_132 2153463 : 2154141 1 Bacillus_thuringiensis_phage(100.0%) NA NA
DBSCAN-SWA_133 2162897 : 2164694 1 Orpheovirus(100.0%) tRNA NA
DBSCAN-SWA_134 2168086 : 2169157 1 Dickeya_phage(100.0%) NA NA
DBSCAN-SWA_135 2178137 : 2178620 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_136 2185358 : 2186237 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_137 2190809 : 2194439 4 Stx2-converting_phage(50.0%) NA NA
DBSCAN-SWA_138 2197988 : 2202662 4 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_139 2226661 : 2228434 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_140 2232467 : 2234956 4 Rhizobium_phage(50.0%) NA NA
DBSCAN-SWA_141 2239803 : 2241411 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_142 2248671 : 2250321 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_143 2254191 : 2266355 8 Pithovirus(25.0%) NA NA
DBSCAN-SWA_144 2271869 : 2273732 2 Salicola_phage(50.0%) NA NA
DBSCAN-SWA_145 2280279 : 2282226 2 uncultured_Mediterranean_phage(50.0%) integrase attL 2274696:2274710|attR 2286126:2286140
DBSCAN-SWA_146 2286032 : 2291464 4 Acidithiobacillus_phage(66.67%) transposase,integrase attL 2281054:2281098|attR 2298001:2298045
DBSCAN-SWA_147 2298045 : 2302012 5 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_148 2308284 : 2309193 1 Corynebacterium_phage(100.0%) NA NA
DBSCAN-SWA_149 2313251 : 2328535 14 Staphylococcus_phage(14.29%) NA NA
DBSCAN-SWA_150 2350033 : 2350858 1 Vibriophage(100.0%) NA NA
DBSCAN-SWA_151 2360606 : 2365829 5 Tetraselmis_virus(33.33%) tRNA NA
DBSCAN-SWA_152 2377181 : 2379053 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_153 2396464 : 2397094 1 Burkholderia_phage(100.0%) NA NA
DBSCAN-SWA_154 2403470 : 2486261 86 Burkholderia_phage(74.51%) capsid,plate,holin,head,tRNA,tail,integrase,terminase,transposase attL 2438867:2438885|attR 2460699:2460717
DBSCAN-SWA_155 2490137 : 2492158 2 Feldmannia_irregularis_virus(50.0%) NA NA
DBSCAN-SWA_156 2496180 : 2496885 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_157 2513752 : 2517503 4 Mollivirus(50.0%) NA NA
DBSCAN-SWA_158 2522323 : 2525253 2 Bacillus_phage(50.0%) protease NA
DBSCAN-SWA_159 2535685 : 2542901 6 Enterobacteria_phage(33.33%) NA NA
DBSCAN-SWA_160 2551099 : 2552962 2 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_161 2559074 : 2563550 3 Ostreococcus_tauri_virus(50.0%) NA NA
DBSCAN-SWA_162 2576353 : 2588856 12 Orpheovirus(16.67%) tRNA NA
DBSCAN-SWA_163 2592260 : 2593190 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_164 2600551 : 2602744 2 Gordonia_phage(50.0%) NA NA
DBSCAN-SWA_165 2615229 : 2620815 5 Streptococcus_phage(33.33%) NA NA
DBSCAN-SWA_166 2628401 : 2641234 11 Lake_Baikal_phage(14.29%) tRNA,protease NA
DBSCAN-SWA_167 2655744 : 2659822 5 Staphylococcus_phage(33.33%) NA NA
DBSCAN-SWA_168 2676827 : 2678144 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_169 2681851 : 2683363 1 Mycoplasma_phage(100.0%) NA NA
DBSCAN-SWA_170 2693437 : 2694253 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_171 2703040 : 2703700 1 Vibrio_virus(100.0%) NA NA
DBSCAN-SWA_172 2712558 : 2714727 1 Indivirus(100.0%) tRNA NA
DBSCAN-SWA_173 2717967 : 2718537 1 Pseudomonas_phage(100.0%) NA NA
DBSCAN-SWA_174 2721824 : 2722505 1 Acanthocystis_turfacea_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_175 2737608 : 2742164 4 uncultured_Caudovirales_phage(33.33%) NA NA
DBSCAN-SWA_176 2746002 : 2746782 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_177 2751113 : 2751839 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_178 2755691 : 2778671 5 Tupanvirus(66.67%) NA NA
DBSCAN-SWA_179 2782929 : 2786967 4 Organic_Lake_phycodnavirus(50.0%) NA NA
DBSCAN-SWA_180 2794389 : 2795706 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_181 2800572 : 2801169 1 Ochrobactrum_phage(100.0%) NA NA
DBSCAN-SWA_182 2806398 : 2817678 9 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_183 2821337 : 2823674 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_184 2830085 : 2831984 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_185 2838512 : 2839466 1 Synechococcus_phage(100.0%) NA NA
DBSCAN-SWA_186 2853360 : 2858658 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_187 2861864 : 2869107 4 Diachasmimorpha_longicaudata_entomopoxvirus(50.0%) tRNA NA
DBSCAN-SWA_188 2872906 : 2875635 2 Pseudomonas_phage(50.0%) NA NA
DBSCAN-SWA_189 2892658 : 2894743 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_190 2904614 : 2922091 18 Micromonas_sp._RCC1109_virus(33.33%) NA NA
DBSCAN-SWA_191 2947723 : 2948314 1 Lactobacillus_phage(100.0%) NA NA
DBSCAN-SWA_192 2959691 : 2960684 1 Burkholderia_phage(100.0%) transposase NA
DBSCAN-SWA_193 2990452 : 2994323 3 Caulobacter_phage(50.0%) NA NA
DBSCAN-SWA_194 3009967 : 3011488 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_195 3030923 : 3035060 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_196 3049670 : 3052868 2 Indivirus(50.0%) NA NA
DBSCAN-SWA_197 3061245 : 3063015 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_198 3071763 : 3084785 13 Lake_Baikal_phage(28.57%) tRNA NA
DBSCAN-SWA_199 3089259 : 3093162 3 Only_Syngen_Nebraska_virus(33.33%) NA NA
DBSCAN-SWA_200 3104168 : 3104945 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_201 3108588 : 3115639 8 Ralstonia_virus(60.0%) NA NA
DBSCAN-SWA_202 3121574 : 3125124 4 Bodo_saltans_virus(33.33%) tRNA NA
DBSCAN-SWA_203 3141565 : 3145016 3 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_204 3156565 : 3158083 1 Diachasmimorpha_longicaudata_entomopoxvirus(100.0%) NA NA
DBSCAN-SWA_205 3164575 : 3170031 5 Yellowstone_lake_mimivirus(33.33%) NA NA
DBSCAN-SWA_206 3182525 : 3185131 2 Ralstonia_phage(50.0%) NA NA
DBSCAN-SWA_207 3194150 : 3194933 1 Flavobacterium_phage(100.0%) NA NA
DBSCAN-SWA_208 3204984 : 3212155 7 Emiliania_huxleyi_virus(33.33%) NA NA
DBSCAN-SWA_209 3218080 : 3221889 3 Klosneuvirus(50.0%) NA NA
DBSCAN-SWA_210 3227010 : 3227799 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_211 3270930 : 3271656 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_212 3276435 : 3279914 4 Enterobacteria_phage(50.0%) integrase attL 3270815:3270829|attR 3281581:3281595
DBSCAN-SWA_213 3285634 : 3291136 6 Acidithiobacillus_phage(50.0%) transposase NA
DBSCAN-SWA_214 3308209 : 3308692 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_215 3317500 : 3318622 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_216 3327110 : 3331825 3 Agrobacterium_phage(33.33%) protease NA
DBSCAN-SWA_217 3338720 : 3339422 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_218 3344399 : 3360624 12 Burkholderia_phage(20.0%) NA NA
DBSCAN-SWA_219 3365620 : 3366580 1 Powai_lake_megavirus(100.0%) NA NA
DBSCAN-SWA_220 3370122 : 3370743 1 Bacteriophage(100.0%) NA NA
DBSCAN-SWA_221 3375170 : 3376349 1 Escherichia_phage(100.0%) NA NA
DBSCAN-SWA_222 3383773 : 3385549 1 Ostreococcus_tauri_virus(100.0%) NA NA
DBSCAN-SWA_223 3390403 : 3396987 5 Burkholderia_phage(33.33%) NA NA
DBSCAN-SWA_224 3400761 : 3401787 1 Cronobacter_phage(100.0%) NA NA
DBSCAN-SWA_225 3413976 : 3416574 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_226 3425548 : 3426664 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_227 3435896 : 3450047 14 uncultured_Mediterranean_phage(28.57%) NA NA
DBSCAN-SWA_228 3464155 : 3468275 4 Powai_lake_megavirus(50.0%) NA NA
DBSCAN-SWA_229 3471977 : 3474239 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_230 3489283 : 3497411 7 Megavirus(33.33%) NA NA
DBSCAN-SWA_231 3505894 : 3508005 2 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_232 3516830 : 3519983 1 Leptospira_phage(100.0%) NA NA
DBSCAN-SWA_233 3529236 : 3531533 2 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_234 3552704 : 3553682 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_235 3558633 : 3559713 1 Planktothrix_phage(100.0%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP008728
Click the left colored region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 391702 : 399363 9 uncultured_Caudovirales_phage(57.14%) NA NA
DBSCAN-SWA_2 457447 : 563887 98 uncultured_Caudovirales_phage(22.22%) integrase,transposase,protease attL 507416:507475|attR 573117:574032
DBSCAN-SWA_3 572270 : 624954 54 Burkholderia_phage(18.18%) integrase,transposase attL 580692:580707|attR 624857:624872
DBSCAN-SWA_4 635880 : 684955 41 Acidithiobacillus_phage(20.0%) integrase,transposase attL 644152:644168|attR 679265:679281
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
3. NZ_CP008729
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008729_1 1558253-1558485 Orphan NA
3 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008729_2 1712573-1712667 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NC_016626 Burkholderia sp. YI23 plasmid byi_1p, complete sequence 1327530-1327560 1 0.968
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_AP014579 Burkholderia sp. RPE67 plasmid p1, complete sequence 37488-37518 2 0.935
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP022367 Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence 1706452-1706482 6 0.806
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NC_015178 Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence 90557-90587 7 0.774
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP021653 Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence 1795526-1795556 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NC_015724 Cupriavidus necator N-1 plasmid pBB2, complete sequence 111903-111933 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP012940 Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence 164288-164318 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP012944 Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence 76184-76214 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP012688 Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence 1795524-1795554 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NC_017575 Ralstonia solanacearum Po82 megaplasmid, complete sequence 1855980-1856010 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP026308 Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence 1855924-1855954 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 CP047139 Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence 302418-302448 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP051295 Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence 164027-164057 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 CP047137 Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence 282758-282788 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP046574 Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence 39155-39185 8 0.742
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_KX833212 Salmonella enterica subsp. enterica serovar Typhi strain Salmonella Typhi strain Ty004 plasmid pTy004_02 plasmid pTy004_02, complete sequence 32323-32353 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP042629 Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-2, complete sequence 41987-42017 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_LR134459 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence 66142-66172 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP038307 Escherichia coli O157:H7 strain SS NE 1040-1 plasmid pNE1040-3, complete sequence 6862-6892 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NZ_CP015845 Escherichia coli O157:H7 strain FRIK2455 plasmid p35K, complete sequence 21363-21393 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 MN586026 Gordonia phage Leonard, complete genome 19090-19120 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NC_031112 Gordonia phage Phinally, complete genome 19087-19117 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 MN586047 Gordonia phage EMoore, complete genome 16746-16776 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 MN586028 Gordonia phage MelBins, complete genome 19294-19324 9 0.71
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 MK511036 Pseudomonas phage BR327, partial genome 25985-26015 10 0.677
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 MK511018 Pseudomonas phage CF28, partial genome 26017-26047 10 0.677
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 NC_026601 Pseudomonas phage vB_PaeS_PAO1_Ab30, complete genome 25990-26020 10 0.677
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 DQ631426 Pseudomonas phage DMS3, complete genome 25251-25281 10 0.677
NZ_CP008729_1 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder 1558426-1558456 31 JX434031 Pseudomonas phage JBD24, complete genome 25835-25865 10 0.677

1. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NC_016626 (Burkholderia sp. YI23 plasmid byi_1p, complete sequence) position: , mismatch: 1, identity: 0.968

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
caccgcggcgggcaacgcgatgggcggccgt	Protospacer
********* *********************

2. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 2, identity: 0.935

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
cacggcggcgggcaacgcgatgggcggccgt	Protospacer
*** ***** *********************

3. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 6, identity: 0.806

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
cggcgcggacggcatcgcgatgggcggcggc	Protospacer
*. ***** ***** ************* *.

4. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NC_015178 (Acidiphilium multivorum AIU301 plasmid pACMV1, complete sequence) position: , mismatch: 7, identity: 0.774

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
caccgccgccggcaccgcgatggcaaaccgc	Protospacer
****** ******* ********  ..***.

5. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP021653 (Ralstonia solanacearum strain RS 488 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

6. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NC_015724 (Cupriavidus necator N-1 plasmid pBB2, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
acaggcggccggcgatgcgatgggcggccag	Protospacer
    *********.*.*************. 

7. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP012940 (Ralstonia solanacearum strain UW163 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

8. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP012944 (Ralstonia solanacearum strain IBSBF1503 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

9. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP012688 (Ralstonia solanacearum strain UY031 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

10. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NC_017575 (Ralstonia solanacearum Po82 megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

11. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP026308 (Ralstonia solanacearum strain IBSBF 2571 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

12. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to CP047139 (Ralstonia solanacearum strain CFBP 8695 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

13. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP051295 (Ralstonia solanacearum strain CIAT_078 plasmid megaplasmid, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

14. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to CP047137 (Ralstonia solanacearum strain CFBP 8697 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggccgcggccggctacccgatgggcgacgtg	Protospacer
 .*********** ** *********.*   

15. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 8, identity: 0.742

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ctccgcgtccgacaacgcgatgggctcgaga	Protospacer
* ***** ***.*************    * 

16. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_KX833212 (Salmonella enterica subsp. enterica serovar Typhi strain Salmonella Typhi strain Ty004 plasmid pTy004_02 plasmid pTy004_02, complete sequence) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
aagtttcgccggaaacgcgatgtgcggccgg	Protospacer
 * . . ***** ********* ******* 

17. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP042629 (Escherichia coli strain NCYU-25-82 plasmid pNCYU-25-82-2, complete sequence) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
aagtttcgccggaaacgcgatgtgcggccgg	Protospacer
 * . . ***** ********* ******* 

18. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_LR134459 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 17, complete sequence) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
gcacatcgccggcaactcgctgggcggccgc	Protospacer
   *.. ********* ** **********.

19. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP038307 (Escherichia coli O157:H7 strain SS NE 1040-1 plasmid pNE1040-3, complete sequence) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
aagtttcgccggaaacgcgatgtgcggccgg	Protospacer
 * . . ***** ********* ******* 

20. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NZ_CP015845 (Escherichia coli O157:H7 strain FRIK2455 plasmid p35K, complete sequence) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
aagtttcgccggaaacgcgatgtgcggccgg	Protospacer
 * . . ***** ********* ******* 

21. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to MN586026 (Gordonia phage Leonard, complete genome) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
agacgccgccggcaacgcggtgggcgtcaag	Protospacer
 . *** ************.****** * . 

22. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NC_031112 (Gordonia phage Phinally, complete genome) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
agacgccgccggcaacgcggtgggcgtcaag	Protospacer
 . *** ************.****** * . 

23. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to MN586047 (Gordonia phage EMoore, complete genome) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
ggacgccgccggcaacgcggtgggcgtcaag	Protospacer
 . *** ************.****** * . 

24. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to MN586028 (Gordonia phage MelBins, complete genome) position: , mismatch: 9, identity: 0.71

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
agacgccgccggcaacgcggtgggcgtcaag	Protospacer
 . *** ************.****** * . 

25. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to MK511036 (Pseudomonas phage BR327, partial genome) position: , mismatch: 10, identity: 0.677

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
gttggcggccggcaccgcgatgcgcgggatg	Protospacer
  . ********** ******* ****    

26. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to MK511018 (Pseudomonas phage CF28, partial genome) position: , mismatch: 10, identity: 0.677

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
gttggcggccggcaccgcgatgcgcgggatg	Protospacer
  . ********** ******* ****    

27. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to NC_026601 (Pseudomonas phage vB_PaeS_PAO1_Ab30, complete genome) position: , mismatch: 10, identity: 0.677

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
gttggcggccggcaccgcgatgcgcgggatg	Protospacer
  . ********** ******* ****    

28. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to DQ631426 (Pseudomonas phage DMS3, complete genome) position: , mismatch: 10, identity: 0.677

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
gttggcggccggcaccgcgatgcgcgggatg	Protospacer
  . ********** ******* ****    

29. spacer 1.3|1558426|31|NZ_CP008729|CRISPRCasFinder matches to JX434031 (Pseudomonas phage JBD24, complete genome) position: , mismatch: 10, identity: 0.677

caccgcggccggcaacgcgatgggcggccgt	CRISPR spacer
gttggcggccggcaccgcgatgcgcgggatg	Protospacer
  . ********** ******* ****    

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 668567 : 705953 26 Acidithiobacillus_phage(22.22%) transposase NA
DBSCAN-SWA_2 712154 : 779365 53 Acidithiobacillus_phage(14.29%) transposase,integrase attL 708529:708546|attR 756413:756430
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage