CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP008761	Paraburkholderia xenovorans LB400 chromosome 3, complete sequence	1 crisprs	NA	1	2
NZ_CP008762	Paraburkholderia xenovorans LB400 chromosome 2, complete sequence	0 crisprs	csa3,WYL,cas3,DinG,RT	0	2
NZ_CP008760	Paraburkholderia xenovorans LB400 chromosome 1, complete sequence	2 crisprs	cas3,WYL,DEDDh,csa3,RT,DinG	2	7

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008761_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008761_1

795409-795480

Orphan

Consensus_repeat	Method
CTGTCGACTGGAGTTAGCGCTTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008761_1

>merge|NZ_CP008761|1|795409-795480|CRISPRCasFinder
CTGTCGACTGGAGTTAGCGCTTTAGCGCTTATTCCAGTCCCATGCAAAGCTGTCGACTGGAGTTAGCGCTTA

>NZ_CP008761|1|1|795409-795480|CRISPRCasFinder
CTGTCGACTGGAGTTAGCGCTTT	AGCGCTTATTCCAGTCCCATGCAAAG
CTGTCGACTGGAGTTAGCGCTTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008761.1\|WP_011493431.1\|798479_799616_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|173847
NZ_CP008761.1\|WP_011493446.1\|783166_784459_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224172
NZ_CP008761.1\|WP_011493429.1\|801148_802045_-\|3-hydroxyisobutyrate-dehydrogenase	unknown	unknown	gnl\|CDD\|130753
NZ_CP008761.1\|WP_011493428.1\|802081_803608_-\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	unknown	unknown	gnl\|CDD\|143404
NZ_CP008761.1\|WP_011493441.1\|790165_790705_-\|Spy/CpxP-family-protein-refolding-chaperone	unknown	unknown	gnl\|CDD\|369534
NZ_CP008761.1\|WP_011493435.1\|794412_795396_-\|electron-transfer-flavoprotein-subunit-alpha	unknown	unknown	gnl\|CDD\|224936
NZ_CP008761.1\|WP_011493430.1\|799826_800837_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378890
NZ_CP008761.1\|WP_011493445.1\|784549_786091_+\|hopanoid-C-3-methylase-HpnR	unknown	unknown	gnl\|CDD\|275160
NZ_CP008761.1\|WP_040123766.1\|797584_798361_-\|enoyl-CoA-hydratase	unknown	unknown	gnl\|CDD\|236373
NZ_CP008761.1\|WP_148311803.1\|782284_782623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008761.1\|WP_011493434.1\|795513_796263_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP008761.1\|WP_011493426.1\|805185_806142_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223656
NZ_CP008761.1\|WP_011493425.1\|806253_807201_-\|cysteine-synthase-A	unknown	unknown	gnl\|CDD\|273463
NZ_CP008761.1\|WP_063719384.1\|787232_787817_+\|cysteine-hydrolase	unknown	unknown	gnl\|CDD\|238245
NZ_CP008761.1\|WP_011493437.1\|792456_793554_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293811
NZ_CP008761.1\|WP_081435624.1\|791630_792110_+\|DUF3331-domain-containing-protein	unknown	unknown	gnl\|CDD\|288644
NZ_CP008761.1\|WP_011493444.1\|786157_786862_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP008761.1\|WP_011493427.1\|803731_805045_-\|MHS-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340927
NZ_CP008761.1\|WP_011493442.1\|787969_789448_-\|mechanosensitive-ion-channel	unknown	unknown	gnl\|CDD\|366370
NZ_CP008761.1\|WP_011493433.1\|796452_797565_-\|enoyl-CoA-hydratase/isomerase-family-protein	unknown	unknown	gnl\|CDD\|379770

Protein	Function_ID	Function_description	E-value
NZ_CP008761.1\|WP_011493431.1\|798479_799616_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|173847	cd01158, SCAD_SBCAD, Short chain acyl-CoA dehydrogenases and eukaryotic short/branched chain acyl-CoA dehydrogenases. Short chain acyl-CoA dehydrogenase (SCAD). SCAD is a mitochondrial beta-oxidation enzyme. It catalyzes the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. The reduced form of SCAD is reoxidized in the oxidative half-reaction by electron-transferring flavoprotein (ETF), from which the electrons are transferred to the mitochondrial respiratory chain coupled with ATP synthesis. This subgroup also contains the eukaryotic short/branched chain acyl-CoA dehydrogenase(SBCAD), the bacterial butyryl-CoA dehydorgenase(BCAD) and 2-methylbutyryl-CoA dehydrogenase, which is involved in isoleucine catabolism. These enzymes are homotetramers.	0
NZ_CP008761.1\|WP_011493446.1\|783166_784459_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|224172	COG1252, Ndh, NADH dehydrogenase, FAD-containing subunit [Energy production and conversion].	1.37888e-108
NZ_CP008761.1\|WP_011493429.1\|801148_802045_-\|3-hydroxyisobutyrate-dehydrogenase	gnl\|CDD\|130753	TIGR01692, 3-hydroxyisobutyrate_dehydrogenase_mitochondrial, 3-hydroxyisobutyrate dehydrogenase. 3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes the NAD+-dependent oxidation of 3-hydroxyisobutyrate to methylmalonate semialdehyde of the valine catabolism pathway. In Pseudomonas aeruginosa, 3-hydroxyisobutyrate dehydrogenase (mmsB) is co-induced with methylmalonate-semialdehyde dehydrogenase (mmsA) when grown on medium containing valine as the sole carbon source. The positive transcriptional regulator of this operon (mmsR) is located upstream of these genes and has been identified as a member of the XylS/AraC family of transcriptional regulators. 3-hydroxyisobutyrate dehydrogenase shares high sequence homology to the characterized 3-hydroxyisobutyrate dehydrogenase from rat liver with conservation of proposed NAD+ binding residues at the N-terminus (G-8,10,13,24 and D-31). This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446). [Energy metabolism, Amino acids and amines].	1.8333e-149
NZ_CP008761.1\|WP_011493428.1\|802081_803608_-\|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase	gnl\|CDD\|143404	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2. Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.	0
NZ_CP008761.1\|WP_011493441.1\|790165_790705_-\|Spy/CpxP-family-protein-refolding-chaperone	gnl\|CDD\|369534	pfam07813, LTXXQ, LTXXQ motif family protein. This protein family includes two copies of a five residue motif is found in a number of bacterial proteins bearing similarity to the protein CpxP. This is a periplasmic protein that aids in combating extracytoplasmic protein-mediated toxicity, and may also be involved in the response to alkaline pH. Another member of this family, Spy, is also a periplasmic protein that may be involved in the response to stress. The homology between CpxP and Spy may indicate that these two proteins are functionally related.	5.61587e-09
NZ_CP008761.1\|WP_011493435.1\|794412_795396_-\|electron-transfer-flavoprotein-subunit-alpha	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	1.60923e-112
NZ_CP008761.1\|WP_011493430.1\|799826_800837_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	3.15977e-48
NZ_CP008761.1\|WP_011493445.1\|784549_786091_+\|hopanoid-C-3-methylase-HpnR	gnl\|CDD\|275160	TIGR04367, protein_of_the_SAM_superfamily, hopanoid C-3 methylase HpnR. Members of this are family are a B12-binding domain/radical SAM domain protein required for 3-methylhopanoid production. Activity was confirmed by mutant phenotype by disrupting this gene in Methylococcus capsulatus strain Bath. This protein family should only occur in genomes that encode a squalene-hopene cyclase (see TIGR01507). [Fatty acid and phospholipid metabolism, Biosynthesis].	0
NZ_CP008761.1\|WP_040123766.1\|797584_798361_-\|enoyl-CoA-hydratase	gnl\|CDD\|236373	PRK09076, PRK09076, enoyl-CoA hydratase; Provisional.	4.95242e-172
NZ_CP008761.1\|WP_011493434.1\|795513_796263_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	2.31912e-94
NZ_CP008761.1\|WP_011493426.1\|805185_806142_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|223656	COG0583, LysR, Transcriptional regulator [Transcription].	1.22042e-34
NZ_CP008761.1\|WP_011493425.1\|806253_807201_-\|cysteine-synthase-A	gnl\|CDD\|273463	TIGR01136, Cysteine_synthase, cysteine synthase. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff. [Amino acid biosynthesis, Serine family].	1.91279e-152
NZ_CP008761.1\|WP_063719384.1\|787232_787817_+\|cysteine-hydrolase	gnl\|CDD\|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	1.11357e-42
NZ_CP008761.1\|WP_011493437.1\|792456_793554_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293811	cd07725, TTHA1429-like_MBL-fold, uncharacterized Thermus thermophilus TTHA1429 and related proteins; MBL-fold metallo hydrolase domain. Includes the MBL-fold metallo hydrolase domain of uncharacterized Thermus thermophilus TTHA1429 and related proteins. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.17534e-39
NZ_CP008761.1\|WP_081435624.1\|791630_792110_+\|DUF3331-domain-containing-protein	gnl\|CDD\|288644	pfam11811, DUF3331, Domain of unknown function (DUF3331). This family of proteins are functionally uncharacterized. This family is only found in bacteria. Proteins in this family vary in length from 96 to 160 amino acids.	5.53268e-26
NZ_CP008761.1\|WP_011493444.1\|786157_786862_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	5.6281e-12
NZ_CP008761.1\|WP_011493427.1\|803731_805045_-\|MHS-family-MFS-transporter	gnl\|CDD\|340927	cd17369, MFS_ShiA_like, Shikimate transporter and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.42964e-170
NZ_CP008761.1\|WP_011493442.1\|787969_789448_-\|mechanosensitive-ion-channel	gnl\|CDD\|366370	pfam00924, MS_channel, Mechanosensitive ion channel. Two members of this protein family of M. jannaschii have been functionally characterized. Both proteins form mechanosensitive (MS) ion channels upon reconstitution into liposomes and functional examination by the patch-clamp technique. Therefore this family are likely to also be MS channel proteins.	8.74798e-26
NZ_CP008761.1\|WP_011493433.1\|796452_797565_-\|enoyl-CoA-hydratase/isomerase-family-protein	gnl\|CDD\|379770	pfam16113, ECH_2, Enoyl-CoA hydratase/isomerase. This family contains a diverse set of enzymes including: enoyl-CoA hydratase, napthoate synthase, carnitate racemase, 3-hydroxybutyryl-CoA dehydratase and dodecanoyl-CoA delta-isomerase. This family differs from pfam00378 in the structure of it's C-terminus.	1.18373e-163

>NZ_CP008761.1|WP_011493435.1|794412_795396_-|electron-transfer-flavoprotein-subunit-alpha
MTILVIAEHDAPKEAPLGGNASLKAATLNTVAAAAVIATLAAHDIHVLVAGHNAQGAAEEAAKIAGVTKVLLADAPQLEAGLAENVAATVLNIAKDYSHILAPATAYGKNIAPRIAAKLDVAQISDITAVDSADTFERPIYAGNAIATVQSQDPIKVITVRTTGFDAVAAEGGSATVGKIEAAADAGVSQFVSREVTKLDRPELTSAKIIVSGGRGLGNGENYTKVLEPLADRLNAALGASRAAVDAGFVPNDYQVGQTGKIVAPQLYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPIFSVADYGVVGDLFTVVPEFASQLAQLD
>NZ_CP008761.1|WP_011493437.1|792456_793554_-|MBL-fold-metallo-hydrolase
MAEPQHTASGTVAELTYPFAGPPAPGQTREVAPGVLWIRMPMPLALDHINLWAIADGAGWTVVDTGLRNAGTAEVWERLFEEALGGRPVTRVIVTHMHPDHIGMAGWLTRRFNCRLWMTRLEYLHCRVLVADNGREAPPDAIRFLRGAGWDDSAIEGYRARFGNFGKGTYALPDSYRRLRDKEVIRIGQHDWAVVVGNGHSPEHACLWSPELKLLISGDQVLPRISSNVSVHPIEPDADPMSDWLMSLKKIAGNVPDDVLVLPGHNECFHGLHARLAGLAAGQDAAFERLRAALAKGPGRVVDVFPALFRRPITGSDAQLLGLATGESQACLNYLLYRGEISVDVDADGVRWYSLCEPGSEASGS
>NZ_CP008761.1|WP_081435624.1|791630_792110_+|DUF3331-domain-containing-protein
MHGEHTDTWSQTVALLDHGLAHQMMDTLARIAAAHPQKTAWSHHPALTVRVIERTSARTVSVSWCDPLSGYYGYQSWHASLARRRASCVLSGEPISRGDPVYQPSSRPSRPGNAGAMILASRVDAALRVDHQPAGHEVAAGATGRTDGAGCCGLQEGAL
>NZ_CP008761.1|WP_011493441.1|790165_790705_-|Spy/CpxP-family-protein-refolding-chaperone
MNNILRSTAAPALLVLAFTTGSAWAQTPASGAAAPASTAQTGGHAKKHQDFVEQRIDELHAALKITDQQSQQWDAFAQTMRDNAKDADQAFRERASKLGSMTADEAMKSYASITQLHAQNMQKLATAFSALYATLSDDQKKTADVLFRNEHKHGKRHGPQRQHKPAAGGAASAPVPASD
>NZ_CP008761.1|WP_011493442.1|787969_789448_-|mechanosensitive-ion-channel
MPANLLLHMAPSCLAAALNLLLVLLGMPNRLVIRTIGRCAAFALLTAAMLHDGMVPTQAPWHLMLPEVRFVWGALEIAWWLLAASTVAAVVRTYYTLGGRLRERRFMLDVIGTLLYLSAALAIITDVFHIPLKGVLATSGALAIVLGLALQSTLSDLFSGLLINATAPYRVGDSISLDSGTEGQVVEITWRATHLAKANRDLIVVPNSTIAKSRIVNASLPRGAHASTARFQAPSRLRPSDVMHALQLAAETCVGIAARPAPVIVTRSVGLDATDYEVSFFASERWQADEALNSFYDAAHRHLESFHALISPAAQADDASAGTLEYQLIAGIRVFGLLAREERIKLAAALVRRELTPGQIVLEAGQIPDAITIVGYGVLAASPGGDDHSADILRFGPREYLGESGPIAGVPLSVRVVARTYAIVYELPGNAVAALLKEHPEVAHALSARLADREREGRALMQPQAEMPVTRHGLASWIASCIRALHQGHREP
>NZ_CP008761.1|WP_063719384.1|787232_787817_+|cysteine-hydrolase
MTQPLSIDRKRAALLVMDFQKLIIDGYATESEPLLSRTATLLEATRDAGIMVIYVVVGFRPGYPEVSERNMTFSAIRTSGRFATDDASIEVHPAVAPRAAETVVTKHRVSAFAGTDLDMILRANSIDTLLLTGIATSGVVLSTLRHAADADYRVFVVGDCCSDSDAEVHRVLLDKIFPRQAVVSEASTIIAGLA
>NZ_CP008761.1|WP_011493444.1|786157_786862_-|TetR/AcrR-family-transcriptional-regulator
MTTTVARPTLACAEKRSRGRPTRSATIDPDALLRSARQVFARQGFEATSVREIARDAGVDPSLMAHHFGSKEALWTAVVEQIAHQAVPMIEATRKLRMLRVTARGRVERALVILVERVFEEPDIGLFFSTAATEKGERLDVLIERLVRPYHDVFAPLLAAGMDSGELAQNDPEVMYWMLINAVSRTVSYGHVLATFSSLPRRPRDFKRAVLEIARGMLGAGPNANRRYQQKSRM
>NZ_CP008761.1|WP_011493445.1|784549_786091_+|hopanoid-C-3-methylase-HpnR
MKVLTVHPSGLMYTRVFLRLEPLGLETVAAVLREAGHEVRLIDLQVETHRDLHRLIRNWQPDAVCFSGNYLANIPEIVDLAKSVKEKQPRCFVFVGGHSVSFTAADILRHAEGAVDCVLKGEGEASVVALLEAASHGADLLQIPGAVTQHGEGPPPHFVESLDPVRPARDLLRHRRKYFIGTLDPCASIEFARGCPWDCTFCSAWTFYGRSYRARSPEVVAGELASIREPGVFIVDDVAFVHADHGMEIGKAVQRRGIRKKYYLETRGDVLLRNREVFEFWRGLGLQYMFIGMEAIDAEGLKAFRKRINLDRNFEALAFARSLGITVAINLIADPDWDHDRFEAVRQWCLEIPEIVNISVNTPYPGTEIWLREQRRLTSLDYRLYDIQHAVLPTRLPLPEFYAELVRTQQVLNRKHLGWTALRGAAGHACHLLLRGQTNFVRMLWRFNSVFNPQLQLNDHAREVHYTMSPPPGITEQRIDVKALYVHGPIGRKGRRIDDATENFVEQTRMGAG
>NZ_CP008761.1|WP_011493446.1|783166_784459_+|NAD(P)/FAD-dependent-oxidoreductase
MTQPVRIVIVGGGIAGLLLATRLGNRLGRRGEAHVTLVDRSPTHIWKPMLHTIAAGTTDVHQQQVFYLTHARAHGFTYRPGEMCGIDRDTQQIQLAALAMPNGEVVMGPGTLGYDILVLSTGSRANDFGTPGVPEHCHFIDSQPQAEAFNEAIRSRIVRSVVENEPLRVAIVGAGATGVELAAELSHLLDVASSYGDASIRARLHLGLYESAPRVLTAFPPDISASSEALLRRLGFEVHTRTRVTEARAQRLRLNDGSEVAADLMVWAAGVKAPDFLGKLPGIEASHANQLFVRPTLQTTHDDHIFALGDCASLTPPGNERPLPPTAQVATQQAEHLAKHLPRWLNGEPLPEFTFRDFGALVSLSDYNAFGTLGKFGFFKGGFIRGRFAQISHAMLYRRHQQALHGFGKASLLWTAERINALVQPKIRLK
>NZ_CP008761.1|WP_148311803.1|782284_782623_-|hypothetical-protein
MADRELLRREETVPGEQQAIAAKSSACFPGGLQPVKQGDYRMRCAGPDSRGSGAASVDEAPRTHIWLSPLEDLAFEKRQPPVWKTIGDCAGFAAGRSRSARQASATQPVMLV
>NZ_CP008761.1|WP_011493434.1|795513_796263_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MKVVVAVKRVVDYNVKVRVKADGTGVDIANVKMSMNPFDEIAVEEAVRLKEAGVATEVIAVSAGVTQAQETLRTALAIGADRAILIESNEELQPLAVAKLLKALVDREQPSLVILGKQAIDDDSNQTGQMLAALANLPQATFASKVVVADGKATVSREVDGGAETLSLTLPAVVTTDLRLNEPRYVTLPNIMKAKKKPLEVVKPEDLGVDVTPRLKTLKVVEPPKRPAGVKVPDVQTLVGKLKTEARVL
>NZ_CP008761.1|WP_011493433.1|796452_797565_-|enoyl-CoA-hydratase/isomerase-family-protein
MNVNQQAETAAQELVIQEINHVGVVTLNRPKAHNALTHAMVLALTERLSQWKDDPAIYGVVIRGAGDRAFCAGGDIRALYQSYRDGSPLYRDFFVDEYRLDHMLHQYPKPCVAVMDGLVMGGGMGIAQGAALRVVTSRSQIAMPETAIGLFPDVGASYFLAKMPVELGLYLGITGVTLNAADALFAGLADTFAESNHLNDLDGLLSAITWTREPLADLRNAIRTGHRADSGRPSLEALMPAIQHHFDPARSIGQVIDSLDAERDPRYGEWASTTAETLRQRSPLMMCVTREQLLRGRHAELADCFRMELGMVYRAFDDGDVIEGIRALLIDKDKAPRWRAATVDEVTQPMVSRFFDSPWSRDGHPLRDLA
>NZ_CP008761.1|WP_040123766.1|797584_798361_-|enoyl-CoA-hydratase
MIDVDRLDDGRVAVLTLRRPPANAFTPEGLSQLQRTVESLDEDERVRAVVITGEGPKFFSAGADLNAFADGNRDVARVAAQRFGAAFEALQNARPVVIAAINGYAMGGGLECALACDIRIAEEQAQLALPETAVGLLPCGCGTQTLPWLVGEGWAKRMILTGERVDAATALRIGLVEEVVGRGAARDAAVAMAQRVTTLSPQAVTFSKGLIHHARNGVPRTAALALERERFVDLFDGADQQEGVRAFLEKRAPRWHNT
>NZ_CP008761.1|WP_011493431.1|798479_799616_-|acyl-CoA-dehydrogenase
MPDSFTDEQRMIRDAARDFATQCLAPHAAKWDRDGDIPQNIVSQLGELGLMGMTVPAEWGGTYTDYVAYALAVEEIAAGCAACATMMSVHNSVGCSPILNFGTDEQKSLYLADLASGRAIGAFCLTEPQAGSEAHNLRTRAVLRDGTWVLNGSKQFVTNGRRAAVAIVFAVTDPDAGKRGISAFIVPTHTPGFKVGKPEKKLGIRASDTCPVTLEDCAVPESTLLGRRGEGLKIALSNLEGGRIGIAAQAIGIARAAFDAARSYAAQRIQFGKPIREHQSVANMLADMITRLNAARLLVHHAARLRSAGLPCLSEASQAKLYASEVAEEVCSQAIQIHGGYGYLEDYPVERHYRDARITQIYEGTSEVQRMVIARQLD
>NZ_CP008761.1|WP_011493430.1|799826_800837_+|AraC-family-transcriptional-regulator
MQLAAPKGTIAICFVEKALQPVRERGLDIDVLLAAAGIAPRLLALPQTRVSAASYSTLWRQINHALDDEFFGQDSRRMKVGSFAMLCHIVIHCQTLGQALRRALRYFDLLLDDLSCTVSVERADARITLHVRAGTPVRIFAHETLLVMLHGLMCWLVGRRIRIRVAHFAYPEPAYSTEYHLMYSPVLEFGCPCTDIVFDGSYLDLPVIQTEQTLKSFLRTAPENVVLKYKNQHGLAARIREKLKTQPLDRWPTFDGLATSLDLGASTLRRRLKDEGQTYQIIKDELRRDMAIGFLCDTKKNVDEIAIELGFAEPSAFHRAFRRWTGARPGAYRIRN
>NZ_CP008761.1|WP_011493429.1|801148_802045_-|3-hydroxyisobutyrate-dehydrogenase
MKIGFIGLGNMGAPMAHNLLKAGHTVNVFDLNAQAVQALVDAGARAAGSPKAAVTDVECVVTMLPAAAHVRSVLTADDGVLAGIAKGVTIIDSSTIDPASVKALAELAAQHGNTLVDAPVSGGTGGAAAGTLTFMVGGSAAAYEQVKPVLSAMGKNIVHCGDTGTGQVAKICNNLVLGITMAGVAEAMSLGAALGIDPKVLGGIINTSTGRCWSSDTYNPFPGVIEAAPSSRGYTGGFGTDLMLKDLGLATDAARSARQPVYLGALAQQLYQTMSTKGAGRLDFSAVIKLYQFEEKPR
>NZ_CP008761.1|WP_011493428.1|802081_803608_-|CoA-acylating-methylmalonate-semialdehyde-dehydrogenase
MNAVTRESSGNIGTARLLIAGEFVESKTTEWRDIVNPATQEVLARVPFATAEEVDAAIRSAHAAFATWKNTPIGARMRIMLKYQALIREHMPRIAKTLSAEQGKTIPDAEGDIFRGLEVVEHAASIGTLQQGEFAENVAGGVDTYTLRQPIGVCVGITPFNFPAMIPLWMFPMAIVCGNTFVLKPSEQDPLSTMQLVELALEAGVPKGVLNVVHGGKDVVDALCTHELVKAISFVGSTAVGTHVYRLGSEHGKRVQSMMGAKNHAVVLPDANREQTLNALAGAGFGAAGQRCMATSVVVLVGAAQQWLPDLVAKAKTLKVNAGNEPNTDIGPVVSRAAKQRILDLIETGVKEGATLALDGRDVKVAGYEQGNFIGPTVFTDVTTDMEIYRQEIFGPVLVVLNAATLDDAIALVNRNPFGNGVGLFTQSGAAARKFQSEIDIGQVGINIPIPVPVPFFSFTGSRGSKLGDLGPYGKQVVQFYTQTKTVTARWFDDDTVNDGVNTTISLR
>NZ_CP008761.1|WP_011493427.1|803731_805045_-|MHS-family-MFS-transporter
MEMQSNPHGAAVIAPVPKRARDYLLAGWASMAGTTIEWYDFFLYGTAAALVFNKIFFPTLDPILGTMAAFATYGVGFIGRPMGGIVFGHFGDRIGRKSMLLVTLLLMGIPSMVIGLIPSYQSIGYWAAGLLVAMRFLQGMAVGGEWGGAVLMAVEHAPPGRKGFFGSLPQTGVGFGLILSSLAMAAVTALPEADLLAWGWRVPFLASILLVIIGWVIRVRVPESPDFERVKALGEPVKAPILAAMRRHPRELLIILGARTAENTWFYLVVAFALAYAANQLKIPKAAILHAITAGAVLSLFTMPFCGYLSDRIGQKRLFLIGLVIMCVFAAPFFAMLATRHPATVWWAMVLGVGVVFPILYAPESQLFASQFPAEIRYSGISLSVQIAGVLGGGVAPMIATALLALGSGNPHYVVAYMVALGIVALICTLLMRAGAE
>NZ_CP008761.1|WP_011493426.1|805185_806142_+|LysR-family-transcriptional-regulator
MQKNTSNAHANLNWDDLRYFLEVARTQRASGAAKRLGVDHTTVARRVRELEAALGTVLFDKSRADGFVLTAEGQRLVAYADAVETSVHSASEQFAGAAQSLSGHVRIGSTEGFGCFFLSPQLTRFTARHPGISIDLLPVPHFVSLSKREADMAITLERPERGQYVFTKLCDYRLRLYGTREYLEAHAPIGAVADLRNHAFIDYVADLAFSHELLYLNRTIPNVTARLCSTSVIAQYYAALQGNALAILPCFMGAPDPRLVPILPEEIVVTRHFWLSSREDLRKLRRVASLWDYLRAAADANRPFLMGESREMHYVDFQ
>NZ_CP008761.1|WP_011493425.1|806253_807201_-|cysteine-synthase-A
MSNFRGVIYDSIVDTIGATPLVRLSKLAAACDCRADVVGKLEFFNPLASVKDRIGIALIETAERAGRIKPGTLLIEPTSGNTGIGLAFVAAAKGYPLVLCMPESASIERRKMVGLLGAKVELTPASEGMGGAIRRAEALKRNHPDSLILQQFDNPANPDAHRHTTAEEIWNDTAGRVDIIVSGIGTGGTITGIGQTLKARKPELQMIGVEPSGSAVLSGGKPGPHKQQGIGSGFLSSILDLSVVDEIVTATDEDAIQTARQAAALEGVPIGISSGAALSVALRVGRRPGNAGKLIVVIVPSFAERYLSTELFADV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP008761_1	1.1\|795432\|26\|NZ_CP008761\|CRISPRCasFinder	795432-795457	26	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1258716-1258741	2	0.923
NZ_CP008761_1	1.1\|795432\|26\|NZ_CP008761\|CRISPRCasFinder	795432-795457	26	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1263385-1263410	2	0.923
NZ_CP008761_1	1.1\|795432\|26\|NZ_CP008761\|CRISPRCasFinder	795432-795457	26	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1258763-1258788	3	0.885
NZ_CP008761_1	1.1\|795432\|26\|NZ_CP008761\|CRISPRCasFinder	795432-795457	26	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1263432-1263457	3	0.885

1. spacer 1.1|795432|26|NZ_CP008761|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 2, identity: 0.923

agcgcttattccagtcccatgcaaag	CRISPR spacer
agcgcttagtccggtcccatgcaaag	Protospacer
******** ***.*************

2. spacer 1.1|795432|26|NZ_CP008761|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 2, identity: 0.923

agcgcttattccagtcccatgcaaag	CRISPR spacer
agcgcttagtccggtcccatgcaaag	Protospacer
******** ***.*************

3. spacer 1.1|795432|26|NZ_CP008761|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 3, identity: 0.885

agcgcttattccagtcccatgcaaag	CRISPR spacer
agcgcttagtccggtcccatgcaagg	Protospacer
******** ***.***********.*

4. spacer 1.1|795432|26|NZ_CP008761|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 3, identity: 0.885

agcgcttattccagtcccatgcaaag	CRISPR spacer
agcgcttagtccggtcccatgcaagg	Protospacer
******** ***.***********.*

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

153870 : 217935

Lysinibacillus_phage(11.11%)

transposase,integrase

attL 202422:202440|attR 217443:217461

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004574636.1\|153870_155160_-\|transposase	ISL3-like element ISPpu12 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.5e-86	40.4
WP_004863699.1\|155181_155694_-	signal peptidase II	NA	NA	NA	NA
WP_004574643.1\|155697_156594_-	cation transporter	NA	NA	NA	NA
WP_011487781.1\|156689_157097_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_158340958.1\|157231_158074_+	MFS transporter	NA	NA	NA	NA
WP_011494008.1\|158133_159270_+	porin	NA	NA	NA	NA
WP_049782510.1\|159334_160165_+	shikimate dehydrogenase	NA	NA	NA	NA
WP_011494006.1\|160170_161436_+	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_063719373.1\|161604_162522_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011494004.1\|162593_165959_-	DUF4214 domain-containing protein	NA	NA	NA	NA
WP_148311799.1\|165973_166177_-	hypothetical protein	NA	NA	NA	NA
WP_011494002.1\|166422_167124_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_011494001.1\|167256_168159_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_049782461.1\|168599_168860_-	hypothetical protein	NA	NA	NA	NA
WP_081435643.1\|169083_169437_+\|transposase	transposase	E5E3P6	Burkholderia_phage	1.3e-32	71.3
WP_011493999.1\|169990_171061_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_011493998.1\|171179_171992_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA
WP_011493997.1\|172003_173635_-	AMP-binding protein	NA	NA	NA	NA
WP_011493996.1\|174009_174792_+	IclR family transcriptional regulator	NA	NA	NA	NA
WP_011493995.1\|174846_175569_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	1.5e-08	27.1
WP_011493994.1\|175561_176287_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	3.4e-08	23.2
WP_011493993.1\|176273_177278_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_011493992.1\|177274_178141_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_011493991.1\|178175_179381_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011493990.1\|179850_181005_+	thiolase family protein	NA	NA	NA	NA
WP_011493989.1\|181004_181403_+	Zn-ribbon domain-containing OB-fold protein	NA	NA	NA	NA
WP_040123495.1\|181399_181795_+	hypothetical protein	NA	NA	NA	NA
WP_011493988.1\|181797_182181_+	acyl dehydratase	NA	NA	NA	NA
WP_011493987.1\|182194_183199_+	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	NA	NA	NA	NA
WP_011493986.1\|183195_184170_+	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA
WP_011493985.1\|184187_184979_+	enoyl-CoA hydratase	NA	NA	NA	NA
WP_011493984.1\|184982_186269_+	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA
WP_011493983.1\|186268_187666_+	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	3.0e-37	26.2
WP_011493982.1\|187707_188880_+	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_011493981.1\|188907_190422_+	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.7e-33	27.4
WP_011493980.1\|190405_191206_+	SDR family oxidoreductase	A0A2N9QUX2	Trichoplusia_ni_ascovirus	1.2e-06	26.1
WP_011493979.1\|191329_192484_+	porin	NA	NA	NA	NA
WP_011493977.1\|193050_194601_+	HAMP domain-containing protein	NA	NA	NA	NA
WP_011493976.1\|194694_195318_-	hypothetical protein	NA	NA	NA	NA
WP_011493975.1\|195551_196934_-	alpha,alpha-trehalose-phosphate synthase (UDP-forming)	NA	NA	NA	NA
WP_148223110.1\|197173_197404_-	hypothetical protein	NA	NA	NA	NA
WP_040123665.1\|198440_199562_-	porin	NA	NA	NA	NA
WP_011493650.1\|201720_202872_+\|transposase	IS110 family transposase	NA	NA	NA	NA
202422:202440	attL	NA	NA	NA	NA
WP_011493969.1\|203968_204739_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_040123496.1\|204884_205616_+	hypothetical protein	NA	NA	NA	NA
WP_011493967.1\|205657_206152_+	MaoC family dehydratase	NA	NA	NA	NA
WP_011493966.1\|206148_207306_+	acyl-CoA dehydrogenase	NA	NA	NA	NA
WP_011493965.1\|207364_207850_+	MaoC family dehydratase	NA	NA	NA	NA
WP_011493964.1\|207839_209129_+	CoA transferase	NA	NA	NA	NA
WP_040123497.1\|209070_209982_+	CoA ester lyase	NA	NA	NA	NA
WP_011493962.1\|210088_211177_+	porin	NA	NA	NA	NA
WP_011493961.1\|211282_212635_+	MFS transporter	NA	NA	NA	NA
WP_040123499.1\|212733_212934_-	hypothetical protein	NA	NA	NA	NA
WP_011493960.1\|213046_213847_-\|integrase	tyrosine-type recombinase/integrase	A0A1P8DJJ6	Virus_Rctr41k	6.0e-22	28.6
WP_011493958.1\|214323_214620_-	cupin domain-containing protein	NA	NA	NA	NA
WP_011493957.1\|214767_215667_+	tetrahydrodipicolinate N-succinyltransferase	NA	NA	NA	NA
WP_011493956.1\|215868_216744_+\|integrase	tyrosine-type recombinase/integrase	S5W9T9	Leptospira_phage	1.2e-26	29.5
WP_011493955.1\|216765_217935_+\|transposase	IS91 family transposase	NA	NA	NA	NA
217443:217461	attR	NA	NA	NA	NA

DBSCAN-SWA_2

518666 : 578805

Tupanvirus(12.5%)

transposase,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011493688.1\|518666_519161_-\|protease	hydrogenase maturation protease	NA	NA	NA	NA
WP_040123534.1\|519157_520675_-	Ni/Fe hydrogenase subunit alpha	NA	NA	NA	NA
WP_011493686.1\|520699_521281_-	NADP oxidoreductase	NA	NA	NA	NA
WP_011493685.1\|521277_522018_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_148223101.1\|522014_523865_-	NADP oxidoreductase	NA	NA	NA	NA
WP_011493683.1\|523882_524917_-	zinc-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.7e-32	28.3
WP_011493682.1\|524948_526400_-	NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta	NA	NA	NA	NA
WP_011493681.1\|526410_526773_-	NAD(P) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_011493680.1\|526792_527962_-	NAD(P) transhydrogenase subunit alpha	NA	NA	NA	NA
WP_011493679.1\|527983_529366_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA
WP_011493677.1\|530124_534159_-	PAS domain S-box protein	Q8QKV4	Ectocarpus_siliculosus_virus	2.6e-12	26.1
WP_011493676.1\|534417_535137_+	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA
WP_011493675.1\|535670_536228_-	DUF2889 domain-containing protein	NA	NA	NA	NA
WP_011493674.1\|536224_536758_-	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_011493673.1\|536914_538486_-	AMP-binding protein	A0A2H4PQM9	Staphylococcus_phage	1.2e-34	26.1
WP_011493672.1\|538490_539291_-	enoyl-CoA hydratase	NA	NA	NA	NA
WP_011493671.1\|539487_540690_-	ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011493670.1\|540731_541895_-	acyl-CoA/acyl-ACP dehydrogenase	NA	NA	NA	NA
WP_011493669.1\|541896_542877_-	hypothetical protein	NA	NA	NA	NA
WP_011493668.1\|542914_544084_-	lipid-transfer protein	NA	NA	NA	NA
WP_011493667.1\|544098_544530_-	Zn-ribbon domain-containing OB-fold protein	NA	NA	NA	NA
WP_011493666.1\|544591_545146_-	SRPBCC family protein	NA	NA	NA	NA
WP_011493665.1\|545142_546825_-	FAD-dependent oxidoreductase	A0A2P0ZL82	Lactobacillus_phage	5.0e-26	27.4
WP_148223100.1\|546827_547595_-	aldolase	NA	NA	NA	NA
WP_011493663.1\|547591_547972_-	cupin domain-containing protein	NA	NA	NA	NA
WP_011493662.1\|547968_548370_-	cupin domain-containing protein	NA	NA	NA	NA
WP_040123536.1\|548383_549295_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_011493660.1\|549451_550414_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011493659.1\|551034_551748_-	ABC transporter ATP-binding protein	M1HRF1	Paramecium_bursaria_Chlorella_virus	4.0e-09	28.9
WP_011493658.1\|551744_552539_-	ABC transporter ATP-binding protein	W5SAS9	Pithovirus	5.1e-13	26.9
WP_011493657.1\|552535_553480_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_011493656.1\|553476_554337_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA
WP_011493655.1\|554333_555584_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011493654.1\|555645_556827_-	porin	NA	NA	NA	NA
WP_040123539.1\|559083_559446_-	hypothetical protein	NA	NA	NA	NA
WP_148311802.1\|559490_559973_+	hypothetical protein	NA	NA	NA	NA
WP_011493650.1\|560544_561696_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011493649.1\|562158_562965_+\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011493648.1\|563300_564326_-\|transposase	IS110-like element ISBfun1 family transposase	NA	NA	NA	NA
WP_148223099.1\|564382_564628_+	hypothetical protein	NA	NA	NA	NA
WP_148223098.1\|564961_565489_+	hypothetical protein	NA	NA	NA	NA
WP_011493645.1\|565566_566565_-\|transposase	IS110-like element ISBfun2 family transposase	NA	NA	NA	NA
WP_011493644.1\|566760_567321_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011493643.1\|567458_568919_-	sodium:sulfate symporter	NA	NA	NA	NA
WP_011493642.1\|569030_569825_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_040123541.1\|569931_570243_+	cupin	NA	NA	NA	NA
WP_011493638.1\|571491_572325_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	6.0e-41	35.7
WP_011493637.1\|572448_574713_+	ParB N-terminal domain-containing protein	G8DH78	Emiliania_huxleyi_virus	5.6e-25	34.4
WP_011493636.1\|574839_575085_+	hypothetical protein	NA	NA	NA	NA
WP_049782505.1\|575280_575487_+	hypothetical protein	NA	NA	NA	NA
WP_011493635.1\|575599_576322_-	hypothetical protein	NA	NA	NA	NA
WP_011493634.1\|576314_577019_-	P-loop NTPase	NA	NA	NA	NA
WP_011493633.1\|577028_577478_-	hypothetical protein	NA	NA	NA	NA
WP_011493632.1\|578406_578805_+\|transposase	transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP008762

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

2609756 : 2615909

Lake_Baikal_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011491850.1\|2609756_2610893_-	homocitrate synthase	E5EQ69	Micromonas_sp._RCC1109_virus	8.6e-06	35.6
WP_011491849.1\|2611122_2611455_-	2Fe-2S iron-sulfur cluster binding domain-containing protein	NA	NA	NA	NA
WP_011491848.1\|2611507_2613382_-	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	3.6e-94	41.4
WP_011491847.1\|2613405_2613729_-	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	2.4e-22	49.1
WP_011491846.1\|2613736_2614111_-	iron-sulfur cluster insertion protein ErpA	A0A2H4N7M3	Lake_Baikal_phage	9.6e-23	50.9
WP_011491845.1\|2614138_2614585_-	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	1.1e-49	75.0
WP_011491844.1\|2614655_2615909_-	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	9.7e-35	38.0

DBSCAN-SWA_2

2756649 : 2805121

Tetraselmis_virus(16.67%)

holin,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011491720.1\|2756649_2757600_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011491719.1\|2757651_2759199_-\|holin	choline-sulfatase	A0A2P0VMN7	Tetraselmis_virus	8.9e-06	31.0
WP_011491718.1\|2759370_2760285_+	LysR family transcriptional regulator	Q6JIH3	Burkholderia_virus	1.2e-34	35.3
WP_011491717.1\|2760423_2761299_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_011491716.1\|2761382_2762240_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011491715.1\|2762375_2763632_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_011491714.1\|2763668_2764982_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_011491713.1\|2765055_2765832_-	drug:proton antiporter	NA	NA	NA	NA
WP_011491712.1\|2765828_2767001_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_011491711.1\|2767005_2768919_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_011491710.1\|2768921_2770985_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_011491709.1\|2771059_2771596_-	4-vinyl reductase	NA	NA	NA	NA
WP_011491708.1\|2771646_2772618_-	membrane dipeptidase	NA	NA	NA	NA
WP_011491707.1\|2772636_2773911_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	1.4e-105	54.8
WP_011491706.1\|2774354_2775356_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_040125368.1\|2775454_2776825_-	hypothetical protein	NA	NA	NA	NA
WP_148223024.1\|2776866_2777580_-	hypothetical protein	NA	NA	NA	NA
WP_011491703.1\|2778100_2779300_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	1.3e-12	27.2
WP_011491702.1\|2779590_2780178_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_011491701.1\|2780241_2781711_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_011491700.1\|2781723_2783409_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	1.5e-51	29.1
WP_011491699.1\|2783530_2784706_+	class C beta-lactamase	NA	NA	NA	NA
WP_158340992.1\|2784864_2785041_+	hypothetical protein	NA	NA	NA	NA
WP_011491697.1\|2785045_2786464_-	MFS transporter	NA	NA	NA	NA
WP_035516607.1\|2786606_2786870_-	hypothetical protein	NA	NA	NA	NA
WP_011491696.1\|2786931_2787588_-	sarcosine oxidase subunit gamma	NA	NA	NA	NA
WP_011491695.1\|2787577_2790580_-	sarcosine oxidase subunit alpha family protein	NA	NA	NA	NA
WP_011491694.1\|2790576_2790939_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_007177093.1\|2790960_2792205_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_011491693.1\|2792248_2793643_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_011491692.1\|2793935_2795018_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_011491691.1\|2795060_2795849_+	hypothetical protein	NA	NA	NA	NA
WP_011487781.1\|2795930_2796338_-	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA
WP_004574643.1\|2796433_2797330_+	cation transporter	NA	NA	NA	NA
WP_004863699.1\|2797333_2797846_+	signal peptidase II	NA	NA	NA	NA
WP_004574636.1\|2797867_2799157_+\|transposase	ISL3-like element ISPpu12 family transposase	A0A2D1GQC1	Lysinibacillus_phage	9.5e-86	40.4
WP_011491689.1\|2799633_2800164_+	hypothetical protein	NA	NA	NA	NA
WP_011491688.1\|2800217_2800733_-	hypothetical protein	NA	NA	NA	NA
WP_011491687.1\|2801022_2801538_-	hypothetical protein	NA	NA	NA	NA
WP_011491685.1\|2802173_2803109_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_011491684.1\|2803212_2804211_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_007177083.1\|2804218_2805121_-\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP008760

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP008760_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008760_1

3867466-3867537

Orphan

Consensus_repeat	Method
AAGCGCTAACTCTGGTCGACAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP008760_1

>merge|NZ_CP008760|1|3867466-3867537|CRISPRCasFinder
AAGCGCTAACTCTGGTCGACAGCGGTGCATGGGACCAGAGTAAGCGCTGAAGCGCTAACTCTGGTCGACAGA

>NZ_CP008760|1|1|3867466-3867537|CRISPRCasFinder
AAGCGCTAACTCTGGTCGACAGC	GGTGCATGGGACCAGAGTAAGCGCTG
AAGCGCTAACTCTGGTCGACAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008760.1\|WP_011489131.1\|3861385_3862090_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|366102
NZ_CP008760.1\|WP_011489119.1\|3871779_3873579_-\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP008760.1\|WP_011489117.1\|3876053_3877100_+\|Nit6803-family-nitriliase	unknown	unknown	gnl\|CDD\|188563
NZ_CP008760.1\|WP_038457639.1\|3860416_3861325_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP008760.1\|WP_011489122.1\|3869285_3869636_+\|ribbon-helix-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226771
NZ_CP008760.1\|WP_011489128.1\|3864848_3865373_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP008760.1\|WP_011489130.1\|3862264_3863185_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187627
NZ_CP008760.1\|WP_011489118.1\|3873807_3875199_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP008760.1\|WP_011489129.1\|3863181_3864852_+\|AMP-binding-protein	unknown	unknown	gnl\|CDD\|341275
NZ_CP008760.1\|WP_011489115.1\|3878165_3878771_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|274941
NZ_CP008760.1\|WP_007181138.1\|3875551_3876034_+\|MSMEG_0572-family-nitrogen-starvation-response-protein	unknown	unknown	gnl\|CDD\|188559
NZ_CP008760.1\|WP_011489125.1\|3866200_3866599_+\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|272886
NZ_CP008760.1\|WP_011489127.1\|3865396_3865807_-\|DUF2000-domain-containing-protein	unknown	unknown	gnl\|CDD\|378176
NZ_CP008760.1\|WP_038457636.1\|3856860_3858069_-\|acyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|132248
NZ_CP008760.1\|WP_011489120.1\|3870176_3871757_-\|HAMP-domain-containing-protein	unknown	unknown	gnl\|CDD\|185001
NZ_CP008760.1\|WP_011489124.1\|3866712_3867426_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236641
NZ_CP008760.1\|WP_011489123.1\|3867553_3869140_+\|GMC-family-oxidoreductase	unknown	unknown	gnl\|CDD\|225186
NZ_CP008760.1\|WP_011489116.1\|3877092_3878163_+\|MSMEG_0568-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|274940
NZ_CP008760.1\|WP_011489133.1\|3858150_3860271_-\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|236864
NZ_CP008760.1\|WP_011489121.1\|3869735_3870116_+\|DUF5594-family-protein	unknown	unknown	gnl\|CDD\|375523

Protein	Function_ID	Function_description	E-value
NZ_CP008760.1\|WP_011489131.1\|3861385_3862090_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	1.77058e-11
NZ_CP008760.1\|WP_011489119.1\|3871779_3873579_-\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	1.831e-95
NZ_CP008760.1\|WP_011489117.1\|3876053_3877100_+\|Nit6803-family-nitriliase	gnl\|CDD\|188563	TIGR04048, nitrilase_sll0784_family, putative nitrilase, sll0784 family. This family represents a subfamily of a C-N bond-cleaving hydrolases (see pfam00795). Members occur as part of a cluster of genes in a probable biosynthetic cluster that contains a radical SAM protein, an N-acetyltransferase, a flavoprotein, several proteins of unknown function, and usually a glycosyltransferase. Members are closely related to a characterized aliphatic nitrilase from Rhodopseudomonas rhodochrous J1, for which an active site Cys was found at position 165. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP008760.1\|WP_038457639.1\|3860416_3861325_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.64894e-54
NZ_CP008760.1\|WP_011489122.1\|3869285_3869636_+\|ribbon-helix-helix-domain-containing-protein	gnl\|CDD\|226771	COG4321, COG4321, Uncharacterized protein related to arylsulfate sulfotransferase involved in siderophore biosynthesis [General function prediction only].	1.18615e-33
NZ_CP008760.1\|WP_011489128.1\|3864848_3865373_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	8.14092e-32
NZ_CP008760.1\|WP_011489130.1\|3862264_3863185_+\|SDR-family-oxidoreductase	gnl\|CDD\|187627	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR. TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	1.95664e-94
NZ_CP008760.1\|WP_011489118.1\|3873807_3875199_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.67916e-90
NZ_CP008760.1\|WP_011489129.1\|3863181_3864852_+\|AMP-binding-protein	gnl\|CDD\|341275	cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS). MACS catalyzes the two-step activation of medium chain fatty acids (containing 4-12 carbons). The carboxylate substrate first reacts with ATP to form an acyl-adenylate intermediate, which then reacts with CoA to produce an acyl-CoA ester. MACS enzymes are localized to mitochondria.	0
NZ_CP008760.1\|WP_011489115.1\|3878165_3878771_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|274941	TIGR04045, acetyltransferase_GNAT_family_protein, putative N-acetyltransferase, MSMEG_0567 N-terminal domain family. Members of this family belong to the GNAT family (pfam00583), in which numerous characterized examples, though not all, are are shown to be N-acetyltransferases or to interact with acetyl-CoA. This family occurs in a sparsely distributed biosynthetic cluster that occurs in Actinobacteria, Cyanobacteria, and Proteobacteria.	2.34344e-92
NZ_CP008760.1\|WP_007181138.1\|3875551_3876034_+\|MSMEG_0572-family-nitrogen-starvation-response-protein	gnl\|CDD\|188559	TIGR04044, MSMEG_0572_fam, MSMEG_0572 family protein. This model describes a family of proteins with remote similarity to the DsrE/DsrF-like family (see pfam02635). All members are found in a context of at least seven genes that includes a radical SAM protein, suggesting biosynthesis. The system is sparsely but broadly distributed in bacteria, including Actinobacteria, Proteobacteria, and Cyanobacteria.	3.7232e-104
NZ_CP008760.1\|WP_011489125.1\|3866200_3866599_+\|lactoylglutathione-lyase	gnl\|CDD\|272886	TIGR00068, Lactoylglutathione_lyase, lactoylglutathione lyase. Lactoylglutathione lyase is also known as aldoketomutase and glyoxalase I. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice. [Central intermediary metabolism, Amino sugars, Energy metabolism, Other].	2.15479e-27
NZ_CP008760.1\|WP_011489127.1\|3865396_3865807_-\|DUF2000-domain-containing-protein	gnl\|CDD\|378176	pfam09391, DUF2000, Protein of unknown function (DUF2000). This is a family of proteins of unknown function. The structure of one of the proteins in this family has been shown to adopt an alpha beta fold.	8.72203e-53
NZ_CP008760.1\|WP_038457636.1\|3856860_3858069_-\|acyl-CoA-dehydrogenase	gnl\|CDD\|132248	TIGR03204, pimC_large, pimeloyl-CoA dehydrogenase, large subunit. Members of this protein family are the PimC proteins of species such as Rhodopseudomonas palustris and Bradyrhizobium japonicum. The pimFABCDE operon encodes proteins for the metabolism of straight chain dicarboxylates of seven to fourteen carbons. Especially relevant is pimeloyl-CoA, basis of the gene symbol, as it is a catabolite of benzoyl-CoA degradation, which occurs in Rhodopseudomonas palustris.	1.75375e-158
NZ_CP008760.1\|WP_011489120.1\|3870176_3871757_-\|HAMP-domain-containing-protein	gnl\|CDD\|185001	PRK15041, PRK15041, methyl-accepting chemotaxis protein.	2.40793e-89
NZ_CP008760.1\|WP_011489124.1\|3866712_3867426_+\|hypothetical-protein	gnl\|CDD\|236641	PRK10019, PRK10019, nickel/cobalt efflux transporter RcnA.	4.73879e-06
NZ_CP008760.1\|WP_011489123.1\|3867553_3869140_+\|GMC-family-oxidoreductase	gnl\|CDD\|225186	COG2303, BetA, Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism].	1.00722e-58
NZ_CP008760.1\|WP_011489116.1\|3877092_3878163_+\|MSMEG_0568-family-radical-SAM-protein	gnl\|CDD\|274940	TIGR04043, hypothetical_protein_WH5701_02349, radical SAM protein, MSMEG_0568 family. Members of this protein family are radical SAM proteins related to MSMEG_0568 from Mycobacterium smegmatis. Members occur within 8-gene operons in species as diverse as M. smegmatis, Rhizobium leguminosarum, Synechococcus elongatus, and Sorangium cellulosum. The function of the operon is unknown, but similarity of MSMEG_0568 to some cofactor biosynthesis radical SAM proteins suggests a similar biosynthetic function. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP008760.1\|WP_011489133.1\|3858150_3860271_-\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|236864	PRK11154, fadJ, fatty acid oxidation complex subunit alpha FadJ.	4.14221e-157
NZ_CP008760.1\|WP_011489121.1\|3869735_3870116_+\|DUF5594-family-protein	gnl\|CDD\|375523	pfam18057, DUF5594, Domain of unknown function (DUF5594). This domain was first discovered in BPSL1050, a highly immunoreactive protein found in Burkholderia pseudomallei. The domain's structure consists of three helical regions which pack onto an antiparallel beta sheet, formed by four strands. The beta sheet is solvent exposed on one side and packs tightly against the three helices on the other side, generating a network of hydrophobic and aromatic interactions that contribute to tight packing of the protein. Is is thought that the small loop L1, the main loop L2, and part of helix alpha-3 extending until Leu120 are the three main immunogenic sequences.	3.73589e-66

>NZ_CP008760.1|WP_011489124.1|3866712_3867426_+|hypothetical-protein
MKTTIIPIVASGHAHHAHHHEHEHPHEHPHEHSDEHSDEHGGGQRAAKAATAALRIPLTRRELLRGTGVLMGTLAVSSVLSSFAPSRAWALELQGLDTHQGEVILAFTRQLYPHPTLDNAVYALVVKDLDAKAKADPAVRQQLADGVKQLDAQAGSDWLKRAPSDQARDVAALAGTPFFNTIRSTAVVSLYANTMAYAHFGYGASEGDGGYLNKGFNSLSWLPNPPASASGPIPTDS
>NZ_CP008760.1|WP_011489125.1|3866200_3866599_+|lactoylglutathione-lyase
MAKLIHTMIRVHDLPRSLQFYQKAFNLDVSHRLDFPDFTLVYLRNGEADAEIELTWNKGRTEPYSHGDGYGHVAFCVDDAKRERQRLLDLGMTPNDLREFHNDDGELLARYFFIQDPDGYKIEVLERYGHYQ
>NZ_CP008760.1|WP_011489127.1|3865396_3865807_-|DUF2000-domain-containing-protein
MEFDTKVAIIVLDDLAVWQKLNVTAFLATGIAGAAPEAMGEPYEDAAGRRHARLFGQPMMVYQADNAGLLRAFRQGIERELTRAVYVRAMFSTGHDQANRDVFRAEPADAPDLVGLAVRGPKKAVDKAVKGLSLHA
>NZ_CP008760.1|WP_011489128.1|3864848_3865373_+|Lrp/AsnC-family-transcriptional-regulator
MSTIRRSLTTRSGRALRAPGAQPGAASLDDTDRKLLALLAEDATRTYAELGKLLFLSAPAVHERARRLKKEGVIKATVAALDAAKLNRPLLAFVHVDTTSWAVTRQLLALQELSDVEEIHTVTGESAMLLKVRTRDTQSLEQLLARIHAIEGFTGTRSYIALTTYLERGPSPDL
>NZ_CP008760.1|WP_011489129.1|3863181_3864852_+|AMP-binding-protein
MNLDGQTYESLTANFAWQIPARYNIGVDVCDKWADGSGRLALIYEDPEGTATRYTFDELKALSDRFANALLAAGAQRGDRIGIFLSQSVETAIAHLAAYKAGMVAVPLFALFGVDAIEHRLGDSGAVALITDHGGVQKVDEIRAALPSLRNVFSVDIDRDNGDPHAPVRSFWHALKSAPAGFTPVDTGADDPAVIIYTSGTTGKPKGALHGHRVLPGHLPGVEMSQQGFPAHATLIWTPADWAWIGGLFDVLLPSWHHGVPVLARRFAKFDGEAAFDLMARHAVSHTFLPPTALKMMRGVERPERWSLALRSVASGGESLGEELIGWGRKALGVTINEFYGQTECNVVVSSCAALFEPRFGAIGRAVPGHHVAIVDMDGNELPPGAIGDIAVAAPDPVMFLGYWGNEAATREKFRGKFLVTGDLGTCDADGFIRFVGRGDDVITSAGYRIGPASIEDSLLRHPAVSMAVVIGAPDRERTEIVMAFVVLNPGFAGDAALVREIQQHVKTRLAAHEYPREIRFVDSLPLTATGKVIRKALREGLEQDADNPASKPERR
>NZ_CP008760.1|WP_011489130.1|3862264_3863185_+|SDR-family-oxidoreductase
MPAASSSTSPPSNGYRSVFREGLFAGKVIIVTGAGSGLGRCTAHELASLGATLALVGRSEDKLKAVQAELAEDHQRTSAGHKTYSCDIRNEQQVRETIASIIADLGRVDGLFNCAGGQFPAKLEKISLNGWDAVVRNNLHGTFLMSRECYTQWMEHHGGTIVNMLADIWGGMPGMGHSGAARAGVWNFTETAACEWGHAGVRVNAVAPGWIASAGMDSYNEDYQALLRTLRHKVPLQRFGTESELAGAAVFLLSEASAFINGTVIRVDGGVPNARHSWPLPPAERTIEYNGFPRYQPPTGLQEQTP
>NZ_CP008760.1|WP_011489131.1|3861385_3862090_-|TetR/AcrR-family-transcriptional-regulator
MTASAISRRVPVQARSEQRLKAILEAARLVFSEVGYASATMTEIAGRVGVSEATIFTYFASKRDLCVRVLGNWYDEIITQVENELPLIAGTRNKFAYLVRTHLYRLTVDGTGLCALILSEGREKDDKFGDVIVELQRRYTAPMMNVLAEGVASGDVRGDMPLGLLRSAVYGPMEHVLWDAVRKQKAVDIEATAASLSDLLWQGLVPPDAQEAALRQLRSDVIGAVKRFEAAGSK
>NZ_CP008760.1|WP_038457639.1|3860416_3861325_+|LysR-family-transcriptional-regulator
MDVNSLTLLVEILDAGNLSEAARRLKMSRANVSYHLNQLERSIGLQLVRRTTRRVEPTEIGLQLYEHGRAIQNALLAARESVTTLGQSLQGRVRLSVPSGYGQLVMSDWLIAFKRLYPGIVLDVMFENRVEDLMRDEVDIAVRVMSEPPQNLVARDMGPVRYVACASPAFAQTHGMPRQLDDLRTAPLITSAVVGRQLRVAAYLRDERHEVLLEPTLISENFLFLRQAVLAGLGVGLVPDYVVQDDLRRGDAVTALDEWRLSIFGTHMYMLYMPNRHHTRAAATFIDFILQQAHGTGRGVPA
>NZ_CP008760.1|WP_011489133.1|3858150_3860271_-|3-hydroxyacyl-CoA-dehydrogenase
MTLNPSADVVTRELRGKVLLVTIDHAPVNALSADVRRGLLAAVEAADADSAVQAVLIVGAGRNFIAGADIREFGKPPLPPALPDVCNRIEACTKPVVAAIHGAALGGGLEVALAAHYRIAVEGAKLGLPEVQLGLLPGAGGTQRTPRLIGAQAALDLILSGRHASAKEALALGLIDRLGSSGDILAEGLAYVHELLAAHAPVRRTRDAVAPGDRAASLAAVTAARAETAKKSRGLFSPLKIVDAVEAAIEQPFDEGLRLERKLFLECLDSPQRAGLIHAFFAEREVLKAPETRDAKPRALNAIGVVGGGTMGAGIAVAVLDAGLPVTMIERDDASLARGLAHIEKVYDGLIARGRMSAEKKAAVMTRWNGSTSYDALTDADLVIEAVFEDLAVKQAVFAELDRVCKAGAVLATNTSYLDIDAIAASISRPADVIGLHFFSPANIMKLLEVVVPKRVSADVVATAFELAKKLRKTPVRAGVCDGFIGNRVLAVYRAAADAMMEDGASPYQIDAAVRAFGFPMGPFQVVDLAGGDIGWAARKRRAATRNPAARYVQIADRLCERGWFGQKTGRGFYLYPEGSRSGTPDPEVEAIIDAERARAGITPRSFTDDEIIRRYMAAMINEGANVVHERIALRPLDVDVTLLYGYGFPRYRGGPMKYADMVGLPKILADIREFAKEDPLFWKASPLLVELVERGADFASLNQTA
>NZ_CP008760.1|WP_038457636.1|3856860_3858069_-|acyl-CoA-dehydrogenase
MDLNFTPEEEAFRADVQAFLRDRLPPRLADKVHGGRRLTRDDMAGWHAILNAQGWLANHWPKEYGGPGWNPVQKFIFENECALAGAPRVVPFGVNMLGPVLIKYGSEAQKRHWLPRILDGSDWWCQGYSEPGAGSDLASVKTSAVRGTDAQGEHYIVNGQKTWTTLGHYANMIFCLVRSATDVRKQEGISFLLIDMKTPGVEVCPIITLDGEHEVNEVFFTDVRVPVENLVGEENKGWTYAKYLLTYERTNIAGVGFSVAAFNRLRKIAAKQRRNGRPLAEDPAFAARMARVEIDLENMKTTNLRVIAAVAGGGVPGAESSMLKIRGTEIRQEISSLTRRAMGPYAQPFVEEALQDGFEGTPVGPDEAASAASLYFNNRKLSIFGGSNEIQKNIISKMILGL
>NZ_CP008760.1|WP_011489123.1|3867553_3869140_+|GMC-family-oxidoreductase
MNQDNNKVRFSHNDDKVVVIIGSGAGGGTLANELAQKGIDVVVLEAGRLHTQADFTTDEWGAFQMLSWLDKRTTSGTWRVAKDFPNLPAWICKTVGGTTTHWAGASLRIKPHEFKAKTTYGDIKDANLLDWPLTREELDPYYDRAQLKMGVTRTNGLPGLPGNNNFKVMSAGAMKVGYKDCNTGHMAINSVVRDDRAHCFQRGFCFQGCRTGAKWSTLYTELPRAQATGHMELRTQAHVVRIETDARGKAKEVLYYDGNGKLQRQKARIVAVAGNSIETPRLLLNSHSSRFPQGLANGSGQVGRNYMRHTTGSVYAAFNDKVDMFKGTTMAGIIEDEAVFNPQRGFAGGYHMETISLGLPFYAAFLDPGAWGPTFTQAMDQYAYTAGMWIVGEDMPRETNRVTLNTDVKDQYGQPVANVHFDDHPNDEAMREHAFRQGSAVYEAAGAKTVYRVPPYPSTHNLGTARMSARAEDGVCNSFGQTHEVSNLFISDGSQFTTGAAENPTMTIVTLAIRQADHIAAQMNKRAV
>NZ_CP008760.1|WP_011489122.1|3869285_3869636_+|ribbon-helix-helix-domain-containing-protein
MCGIYINADPILYESRTRSLRIHGVITTVRLENLFWDVLHEIAARENMTTSQFAVQLYDELIALRGELPTNFASFLRVCCLRYLSMRTEKGADVPDTIPEPAAGSGEARPRMLKTV
>NZ_CP008760.1|WP_011489121.1|3869735_3870116_+|DUF5594-family-protein
MRPESAARFDQQFAPRIAEALAACFATTVHTEVLPYGGHGHPTRVRIHAAPIEDLGLYPHPLNLYLTWDSDEIERLMGAEGPARFAGYLAALPRKLAAWNRARELDFVSHTQAEPVALIGGLDFES
>NZ_CP008760.1|WP_011489120.1|3870176_3871757_-|HAMP-domain-containing-protein
MTFYRNLKIAVKLALLGAVLLAATMIVGLEGWHALSRTHALQIESARSLSQYAQAADTARVAQVEFKKQVQEWKDLLLRGADPAAFAKYRDAFNKESGTTHAALLRLKDQLSAVGANVDGVDKALATHAALQDSYLAALRHYDAADPNTAHVVDALVKGIDRAPTAAIDDIVAAVMQQAHDSSVRTSEAAEHAYTIATVLLLSVVIGSLGVGAFAVWFLSRSITVPVRQAVGVAQAVAAGDLRADVPVVSRDETGQLLVALNDMNQRLRHIVSEIREGAHTISSATQEIAAGNLDLSARTEQQAASLEETAASMQHFTDSVQRNAANAREATALAQTAAHAAREGGAVMTDAVRTMGQIDAASRRIVDIIAVVEAIAAQTNILALNAAVEAARAGTQGRGFAVVASEVRSLAQRSADAAREIKTLIRESVATIEAGTQLIDRASNTMDGVVESAGSVTRIVESIATASADQATGIAEVNDAVTQMDQVTQSNAALVEQAAAAADAVQSKASGLVQSVSFFRLGATA
>NZ_CP008760.1|WP_011489119.1|3871779_3873579_-|methyl-accepting-chemotaxis-protein
MFTSIRARIVALCVAIVVVALAANAVLNYVVANSYNADAINSSLTAVESGHAAGISDWVASNSQMINSLQDAVLQPDPSAALKQIAAAGKFTNVYVGYADKTAKFSDPTGIPADYDPTGRPWYKQAATAGKPVVTPPYVDVGTGKLVVAFAVPVVRDGAVKGVVSGDVAMDSVIANVKAIHPTPASFGMLIDASGHIVAHPDPKLTLKPVSDVAAGLSGDKLAALFSADRPLEMDVNGSTKLMRAQAIPGTDWYAVVALDKAEATAGMRSLLTASVIALIVIAGIAAAVVAAVTAVSFQRLSKVRDAMDAIGSGEGDLTQRLPAVGNDEVAQIARSFNTFIDKLSRVMRQIRDASESVRVAANEIAAGNVDLSGRTESAAASLQQTAASMEEITSTVTQSASSAKQADDSAVSASQVASRGGVVISEVIATMGEIQHASVKIADIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQRSAQAAKEIKALIESTVASVSSGSGQVRQAGETMTEIVSNVANVTTIISEITQAANEQTRGIQEVNRAVSQLDEMVQQNAALVEESTAAAAALQSQAVSLAGAVTQFKLD
>NZ_CP008760.1|WP_011489118.1|3873807_3875199_-|PLP-dependent-aminotransferase-family-protein
MSSPTHHWIKRLADIRKPAYLAIPDLIEEDLATGRLRPRDRLPGLRDLAEELALNYTTVARAYAEARKRGLLDSRAGSGTFVRGRTATLPLAGGSSIEMSMNTPPEPPDYAMRLRDSAARRMAESDPYQLLRYQDFGGSAADKDAGAEWLRRRVPHCDAQNVLVCPGIHSALVALVSQLARPGATICLDSLAYPGIKAIAAQLGVRLQALPRDDEGPLAHAFEALCKTDKPSAFYCNPTLQNPSTLTLTHKRREALADVALRYSVPIIEDDAYAMLPQSAPDALASLAPELTYYVTGLSKCFGAGLRVAHLHAPTPRQTQRLAGALRATTVMASSYTVMLATQWIADGTAADMLTAIRNESRARQAIAARMLEAWPYEAHQDGFHLWLPVPVESGWSASELALQLRNQGIAAVAGAAFSTDGNPPNAMRVCLGGSKTRDECTEALRIVAETLDHPHHLHSPVM
>NZ_CP008760.1|WP_007181138.1|3875551_3876034_+|MSMEG_0572-family-nitrogen-starvation-response-protein
MPAVNKPLHQKGDYLVDYEEKVFEDVKAEPGEKALVTFHTVAFEGSIGFVNLLQATRLQRKGFETSVLLYGPGVTLGLQRGFPTLGDEAFPGHLNFNKQLTKFMEEGGKVYACRFALQALYGHGEASLIEGIRPISPLDVLDIQLLHRKDNALVIHTWTV
>NZ_CP008760.1|WP_011489117.1|3876053_3877100_+|Nit6803-family-nitriliase
MSDKSTGKRIVRAAAVQIAPDFERSGGTLEKVCEAIEQAAREGVQLIVFPETFVPYYPYFSFVRPPVASGADHMKLYEEAVVVPGPVTQAVAEQARLHRMVVVLGVNERDHGSLYNTQLIFDVDGQIVLKRRKITPTFHERMIWGQGDAAGLTVARTAVARVGALACWEHYNPLARYALMTQHEEIHCSQFPGSLVGPIFADQIEVTIRHHALESGCFVVNATGWLSEAQIASVTPDTNLQRALRGGCNTAIVSPEGQHLAEPLREGEGMVIADLDMALITKRKRMMDSVGHYARPELLSLAINRRPAETVAPMQAWPAVPGADFNSTEGGCDERQRTAVGREPAIDD
>NZ_CP008760.1|WP_011489116.1|3877092_3878163_+|MSMEG_0568-family-radical-SAM-protein
MTELQSAGLRLVSPDSGAASRRGGAGPSDHKAVTVDGVTIMVPVHTSTAWHSPFVAQTPDASGSSALLRGTIPIASISFPKAPRFYGMQTLDGVPYSHIATLHGADVLATTVLQTCIRYESRRKSCKFCAIGQSLAAGRTIARKTPEQLAEVARAAVLLDGVKHMVLTTGTPPTPDRGAQILCESAFAIKAAVDLPIQAQCEPPDDDRWFARMKASGIDTLGMHLEVVTPELRERIMPGKASVPLSRYMEAFRSAVAVFGRGQVSTYILAGLGDSAEAILTMSRELIELGVYPFVVPFVPISGTPLEDHPAPTPEFMKSVLQPLGGMLNAAAMRSSDIKAGCGKCGACSSLSSYEA
>NZ_CP008760.1|WP_011489115.1|3878165_3878771_+|GNAT-family-N-acetyltransferase
MFGEAIAGEALDGDMGFAPYAPSEFRIKWTTLNWEAEEAFRLRRAVFCIEQGIFIGDDRDGIDQHAQQLVAVSCLGGMPEQVVGTVRIHRDHDNVWFGSRLAVHAAFRRHGKIGATLIRLAVSSAHALGCETFLAHVQSQNVPLFRAMYWDVLAEETLLGRPHHLMQAQLDRYPPCATPYGGFVTQSQPSARRRERERSAA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP008760_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP008760_2

4845194-4845371

Orphan

Consensus_repeat	Method
ATCTCGTACCCGCTCGGGTACGAAG	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP008760_2

>merge|NZ_CP008760|2|4845194-4845371|CRISPRCasFinder
CGTTCGTACCCGCTCGGGAACATTATGCCACGTGACCGGGATGGAGACTTGATCTCGTACCCGCTCGGGTACGAAGTGGCATGGTAGAGGTCTATTCAGTTCATTTCGTACCCGCTCGGGTACGAAGAACGGAAAAATGGCCGACTGGCGGCCTTCACGTACCAGAGCGGATACGGAG

>NZ_CP008760|2|2|4845194-4845371|CRISPRCasFinder
CGTTCGTACCCGCTCGGGAACATTA	TGCCACGTGACCGGGATGGAGACTTG
ATCTCGTACCCGCTCGGGTACGAAG	TGGCATGGTAGAGGTCTATTCAGTTC
ATTTCGTACCCGCTCGGGTACGAAG	AACGGAAAAATGGCCGACTGGCGGCC
TTCACGTACCAGAGCGGATACGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP008760.1\|WP_011488303.1\|4858742_4860680_-\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|182731
NZ_CP008760.1\|WP_011488312.1\|4843607_4844900_-\|type-II-toxin-antitoxin-system-HipA-family-toxin	unknown	unknown	gnl\|CDD\|341494
NZ_CP008760.1\|WP_011488306.1\|4855010_4856633_+\|glucose-6-phosphate-isomerase	unknown	unknown	gnl\|CDD\|234679
NZ_CP008760.1\|WP_011488307.1\|4853174_4854776_+\|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase	unknown	unknown	gnl\|CDD\|182554
NZ_CP008760.1\|WP_011488313.1\|4842678_4843458_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|234605
NZ_CP008760.1\|WP_007585907.1\|4861049_4861322_-\|HU-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|259853
NZ_CP008760.1\|WP_011488317.1\|4837657_4839346_-\|fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|235908
NZ_CP008760.1\|WP_011488304.1\|4858312_4858654_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP008760.1\|WP_007182003.1\|4856804_4857491_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226647
NZ_CP008760.1\|WP_038458856.1\|4844889_4845147_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|213767
NZ_CP008760.1\|WP_011488309.1\|4849895_4851437_+\|peptidase-M35	unknown	unknown	gnl\|CDD\|199913
NZ_CP008760.1\|WP_011488310.1\|4845485_4849571_-\|phosphoribosylformylglycinamidine-synthase	unknown	unknown	gnl\|CDD\|235394
NZ_CP008760.1\|WP_011488315.1\|4841814_4842345_+\|septation-protein-A	unknown	unknown	gnl\|CDD\|234704
NZ_CP008760.1\|WP_011488314.1\|4842346_4842667_+\|BolA-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|376601
NZ_CP008760.1\|WP_038457953.1\|4857489_4858194_+\|arylesterase	unknown	unknown	gnl\|CDD\|238860
NZ_CP008760.1\|WP_011488319.1\|4834086_4835265_-\|acetyl-CoA-C-acyltransferase	unknown	unknown	gnl\|CDD\|180843
NZ_CP008760.1\|WP_007181992.1\|4841229_4841652_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	unknown	unknown	gnl\|CDD\|234692
NZ_CP008760.1\|WP_011488318.1\|4835403_4837488_-\|3-hydroxyacyl-CoA-dehydrogenase	unknown	unknown	gnl\|CDD\|183293
NZ_CP008760.1\|WP_011488316.1\|4839543_4841100_+\|YdiU-family-protein	unknown	unknown	gnl\|CDD\|234583
NZ_CP008760.1\|WP_011488308.1\|4851703_4853002_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|234819

Protein	Function_ID	Function_description	E-value
NZ_CP008760.1\|WP_011488303.1\|4858742_4860680_-\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|182731	PRK10788, PRK10788, periplasmic folding chaperone; Provisional.	7.20021e-62
NZ_CP008760.1\|WP_011488312.1\|4843607_4844900_-\|type-II-toxin-antitoxin-system-HipA-family-toxin	gnl\|CDD\|341494	cd17809, HipA_So_like, type II toxin-antitoxin sytem toxin HipA from Shewanella oneidensis and similar proteins. This family contains type II toxin-antitoxin (TA) system HipA family toxins similar to Shewanella oneidensis HipA, a serine/threonine-protein kinase that phosphorylates Glu-tRNA-ligase (GltX), preventing it from being charged, leading to an increase in uncharged tRNA(Glu). This induces amino acid starvation and the stringent response via RelA/SpoT and increased (p)ppGpp levels, which inhibits replication, transcription, translation and cell wall synthesis, reducing growth and leading to persistence and multidrug resistance. HipA is the toxin component of the HipA-HipB TA module that is a major factor in persistence and bioflim formation; its toxic effect is neutralized by its cognate antitoxin HipB. HipA, with HipB, acts as a a corepressor for transcription of the hipBA promoter. In the Shewanella oneidensis HipAB:DNA promoter complex, HipB forms a dimer that binds the duplex operator DNA, with each HipB monomer interacting with separate HipA monomers. The HipAB component of the complex is composed of two HipA and two HipB subunits.	2.83571e-132
NZ_CP008760.1\|WP_011488306.1\|4855010_4856633_+\|glucose-6-phosphate-isomerase	gnl\|CDD\|234679	PRK00179, pgi, glucose-6-phosphate isomerase; Reviewed.	0
NZ_CP008760.1\|WP_011488307.1\|4853174_4854776_+\|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase	gnl\|CDD\|182554	PRK10565, PRK10565, putative carbohydrate kinase; Provisional.	1.13521e-93
NZ_CP008760.1\|WP_011488313.1\|4842678_4843458_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	3.97947e-31
NZ_CP008760.1\|WP_007585907.1\|4861049_4861322_-\|HU-family-DNA-binding-protein	gnl\|CDD\|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	5.49297e-41
NZ_CP008760.1\|WP_011488317.1\|4837657_4839346_-\|fatty-acid--CoA-ligase	gnl\|CDD\|235908	PRK07008, PRK07008, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_CP008760.1\|WP_007182003.1\|4856804_4857491_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226647	COG4181, COG4181, Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism].	2.76252e-104
NZ_CP008760.1\|WP_038458856.1\|4844889_4845147_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|213767	TIGR03070, couple_hipB, transcriptional regulator, y4mF family. Members of this family belong to a clade of helix-turn-helix DNA-binding proteins, among the larger family pfam01381 (HTH_3; Helix-turn-helix). Members are similar in sequence to the HipB protein of E. coli. Genes for members of the seed alignment for this protein family were found to be closely linked to genes encoding proteins related to HipA. The HibBA operon appears to have some features in common with toxin-antitoxin post-segregational killing systems. [Regulatory functions, DNA interactions].	7.19088e-13
NZ_CP008760.1\|WP_011488309.1\|4849895_4851437_+\|peptidase-M35	gnl\|CDD\|199913	cd11007, M35_like_1, Peptidase M35-like domain of uncharacterized proteins. This family contains proteins similar to the M35 Zn2+-metallopeptidases, also known as the deuterolysin family, presumably these are bacterial metalloendopeptidases that have yet to be characterized. Typically, members of this family of extracellular peptidases contain a unique zinc-binding motif (the aspzincin motif), defined by the HExxH + D motif where an aspartic acid is the third zinc ligand; however, members of this family do not contain the GTXDXXYG motif C-terminal to the His zinc ligands that is typical for the M35 proteases. Deuterolysins are highly active towards basic nuclear proteins such as histones and protamines, with a preference for a Lys or Arg residue in the P1' subsite. MEPs specifically cleave peptidyl-lysine bonds (-X-Lys-) in proteins and peptides. Many members of the M35 peptidases display unusual thermostabilities.	2.75623e-36
NZ_CP008760.1\|WP_011488310.1\|4845485_4849571_-\|phosphoribosylformylglycinamidine-synthase	gnl\|CDD\|235394	PRK05297, PRK05297, phosphoribosylformylglycinamidine synthase; Provisional.	0
NZ_CP008760.1\|WP_011488315.1\|4841814_4842345_+\|septation-protein-A	gnl\|CDD\|234704	PRK00259, PRK00259, intracellular septation protein A; Reviewed.	8.07757e-85
NZ_CP008760.1\|WP_011488314.1\|4842346_4842667_+\|BolA-family-transcriptional-regulator	gnl\|CDD\|376601	pfam01722, BolA, BolA-like protein. This family consist of the morphoprotein BolA from E. coli and its various homologs. In E. coli over expression of this protein causes round morphology and may be involved in switching the cell between elongation and septation systems during cell division. The expression of BolA is growth rate regulated and is induced during the transition into the the stationary phase. BolA is also induced by stress during early stages of growth and may have a general role in stress response. It has also been suggested that BolA can induce the transcription of penicillin binding proteins 6 and 5.	1.52708e-33
NZ_CP008760.1\|WP_038457953.1\|4857489_4858194_+\|arylesterase	gnl\|CDD\|238860	cd01822, Lysophospholipase_L1_like, Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.	6.3961e-93
NZ_CP008760.1\|WP_011488319.1\|4834086_4835265_-\|acetyl-CoA-C-acyltransferase	gnl\|CDD\|180843	PRK07108, PRK07108, acetyl-CoA C-acyltransferase.	0
NZ_CP008760.1\|WP_007181992.1\|4841229_4841652_+\|peptide-methionine-(R)-S-oxide-reductase-MsrB	gnl\|CDD\|234692	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB.	6.9725e-90
NZ_CP008760.1\|WP_011488318.1\|4835403_4837488_-\|3-hydroxyacyl-CoA-dehydrogenase	gnl\|CDD\|183293	PRK11730, fadB, fatty acid oxidation complex subunit alpha FadB.	2.07753e-155
NZ_CP008760.1\|WP_011488316.1\|4839543_4841100_+\|YdiU-family-protein	gnl\|CDD\|234583	PRK00029, PRK00029, YdiU family protein.	0
NZ_CP008760.1\|WP_011488308.1\|4851703_4853002_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|234819	PRK00711, PRK00711, D-amino acid dehydrogenase.	3.50877e-70

>NZ_CP008760.1|WP_038458856.1|4844889_4845147_-|helix-turn-helix-transcriptional-regulator
MTALGDLVRASRLAQGLTRDDLAIAAGLSPKFITHIEAGKPTAQIGKVLHLLAELGITLRAQVSVDIPPASATKALQRRRTTHGR
>NZ_CP008760.1|WP_011488312.1|4843607_4844900_-|type-II-toxin-antitoxin-system-HipA-family-toxin
MAARTLVAYANGRRVGIVSDDSGIWSFTYDKDWLAREDAFELSPAFPLAAGSFVDGSSQRPVQWFFDNLLPEAEMRIALAREARVEAGDAWGLLAYYGRESAGALTLLAEGEHEASGGLQPLSYANLEARIQAMPQHALTATAPKRMSAAGAQQKLLLTLRGDAPDYELFEPVGSEPSMHLLKPDMRSTGYPHSAINEFFCMRLARAMGVRVPPTHFIRVPSACYVIDRFDRDTTTEPARRLHTVDAMQLLNYDRSFKYQNATAQVLSDAIEKTSTRAVARLDVFRWAVFNVLIGNADSHLKNLSFFVSPRGYMLAPFYDLVSTVVYHTPTYQPQQRDRWPHCDLTMPVGDATRFADISRRNMLAFGEALHLAPRGSERLLDDMLAILDARVMDTRRAVGEIAQPNAGEVRLLDSIVAMPLAEMSAALRK
>NZ_CP008760.1|WP_011488313.1|4842678_4843458_+|peptidyl-prolyl-cis-trans-isomerase
MTLKKTRLWVLLAAFAAAPAFAQNIAVVNGTPIPKARADALIDQLVHQGQQNTPQLQMAVREELVNREILMQEALRRGLPNRPDIKAQIAVAQQTVVLRALIEDFVKNNTPTDAEVTARYNALIKDAGGKEYHLHHILVDNEQQAKDLIAKIKAGASFEDLAKQYSKDPGSGKNGGDLDWSDPKAYVPEFADAATHLQKGQMTDTPVHTQFGWHIIRVDDVRNVTPPPLEQVRPQIVQQIQQEKLQAFEEGLRKNAKIQ
>NZ_CP008760.1|WP_011488314.1|4842346_4842667_+|BolA-family-transcriptional-regulator
MTSNADVFMHATTAERAALIETRLAAALAPVESIRITDDSAQHAGHAGASAGGHFSVTIVAAAFAGKARVARHRMVYDALADAMQRGIHALAITAYTPEEFALLPR
>NZ_CP008760.1|WP_011488315.1|4841814_4842345_+|septation-protein-A
MKFLFDLFPIILFFVAFKIWGIFTATAVAIVATLVQIAWVAFRHRKVDPMLWVSLGVVTVFGGATLVLHNDTFIKWKPTVLYWAFSVALIVSQLAFNKNLIEAMMGKQITLPHAIWGKLNVVWGVFFVLLGLVNLFVAYNYTTDQWVNFKLFGATGCLVVFIVGQSLWLSKYMKEE
>NZ_CP008760.1|WP_007181992.1|4841229_4841652_+|peptide-methionine-(R)-S-oxide-reductase-MsrB
MNKPDDLNTDAPAVQKDDAEWRKQLSDVEYQVTRHAATERPFTGRYHDHWDRGIYDCVCCGTPLFESDTKFDAGCGWPSYFKPINGEVIAEKTDRSHGMLRIEVQCKNCGAHLGHVFEDGPAPTGLRYCINSAALQFEPK
>NZ_CP008760.1|WP_011488316.1|4839543_4841100_+|YdiU-family-protein
MSFSPSIAGLSGPLSALSDALTTAPESAFASLGSVFLTRLPAAPLSAPYVVGFSAETAALLGLEPGIENDPAFAELFSGNATREWPAEALPYASVYSGHQFGVWAGQLGDGRALGLGEVEHGGRRFELQLKGAGRTPYSRMGDGRAVLRSSIREYLCSEAMHHLGIPTTRALCVIGSDQPVRRETVETAAVVTRVAPSFVRFGHFEHFYSNDRTDALRALADHVIERFYPHCREADDPYLALLNEAVISTADLMVEWQAVGFCHGVMNTDNMSILGLTIDYGPFGFMDGFDAGYICNHSDSQGRYAYRMQPQIAYWNLFCLAQGLLPLLGEKHEESVRGDKAIEDAQRVLGGFKDRFAPALERRMRAKLGLETERAGDDALANRLFEVMHANRADFTLTFRNLARVSKHDASGDAAVRDLFLDRAAFDAWVNDYRARLSEETREDAARAIAMNRVNPKFVLRNHLAETAIRRAKEKDFSEVERLAAVLRRPFDEQPEHEAYAGLPPDWASSLEVSCSS
>NZ_CP008760.1|WP_011488317.1|4837657_4839346_-|fatty-acid--CoA-ligase
MTTPLAGQMMDVPLTVPSLLAHAARHFGSTEIVSRRIEGDLHRYTYRDCEKRAKQLAQALIALGVEPGERVATLAWNGYRHLEAYYGTTGFGAVCHTINPRLFPDQIAYIINHADDAYVLFDTTFAPLVDVLAPQCPKVRGWIALADEAHLPAMQTPVLSYETLVTAQDGNYEWPPLDERQASYLCYTSGTTGNPKGALYSHRSTVLHAFGAALPDAMSLSARDCVLPVVPMFHVNAWGIPHSAPLTGAKLVFPGKDLDGKSLYELMESERVTYSAGVPTVWLGLLNYLREAKVRFSSLNRTVIGGSACPPAMLRTFEDDYGVQVIHAWGMTEMSPLGTLSRLTWEQSQRPLEEQRKLLEKQGHVLYGVDMKIVGEDGRELPWDGVAFGDLHVRGPWVIDRYFRKDDSPLVDGWFPTGDVATIDRDSFLHITDRSKDVIKSGGEWISSIDIENVAIAHPAVAEAACIACAHPKWTERPLLVVVKRPGFEVTRDELIAFYEGKVARWWIPDDVAFVDELPHTATGKLQKLKLRDIFRDHVLPSALEDEKDCPLTPLARGNPVS
>NZ_CP008760.1|WP_011488318.1|4835403_4837488_-|3-hydroxyacyl-CoA-dehydrogenase
MAVDYTTHDGVAVITLNNPPVNGLGLSTRAGIVEGIERAQNDPGIEAIVLTGAGKAFSGGADITEFNTPKATQEPTLATVIKIVEGSAKPVVAAIHSVAMGGGLELALGAHYRVAAPGAQIALPEVKLGILPGAGGTQRLPRAIGLEAALNMIVSGTPVMSEKLADSGLFDELAQGDLAEAALAFARKVGAKEGPHPKLRDRRIEHPNAAGFIQFARNSVAAVAKHFPAPHKCIDAVEAGVQNGFDKGLAFERECFIALVQTPESRALRHAFFGERAASKIPDVPSDTPVRDINQVAVIGAGTMGGGIAMNFINAGIPVTLLETRQEALDRGLATIRKNYEASVRKGKLKPEALEQRMALITPTLSYDDLKNADLIVEAVFEELDVKEQVFRRLDEVAKQGAILASNTSTLDVDRIAAFTKRPQDVVGMHFFSPANVMKLLEVVRGRETAKDVLATVMKLAKKIRKTAVVSGVCDGFIGNRMIEQYIRQALFMLEEGALPAQVDRAIEKFGFAMGPFRMSDLAGNDIGWAIRKRRYQEHPDMHYSKIADRLCETGRFGQKTGGGWYDYKAGDRTAYPSKVVDDMIVAFSKEANAGRRKISDEEIVERLVFSLVNEGAKILEEGIASKASDIDMVYLAGYGFPLYRGGPMLYADTVGLYNVERAIRRYAAQPNGDAWQLASGIAALAAQGRGFNG
>NZ_CP008760.1|WP_011488319.1|4834086_4835265_-|acetyl-CoA-C-acyltransferase
MTDAVIVSTARTGLAKSWRGGFNMTHGATLGGHVTQAAVERAKLDPARVEDVIMGCANPEGATGMNIARQIALRAGLPVSVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVYVAGGVESISCVQNEMNHHMLTEGWLSENKPEIYWSMLQTAENVAKRYSISKERQDEYGVRSQQRAAAALEAGRFKDEIVPLTVLAGVTDKAGGRLFTKEVTVSGDEGIRADTTLEGVSKIRTALPGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFAVAGCEPDEMGIGPVFAVPKLLRQAGLKVEDIDLWELNEAFAVQVLYCADKLGIPQDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKRRGAKLVVVTMCIGGGQGAAGLFEVV
>NZ_CP008760.1|WP_011488310.1|4845485_4849571_-|phosphoribosylformylglycinamidine-synthase
MAHFSCFPGASALSDFRQTRLLETLTRIDPNITGVRGQYLHFVNAQTPLSAEDNAKIEALMHYGQPLEESKERGTAEAFLVVPRFGTVSPWASKATDIAHLCGLTQVRRIERGVEYTVTLKSGLLGGRKALSDEARAAVAAALHDRMTESVSPSRDHALHLFDELPAKPLQTVDVLGHGRGALVAANTELGLALAEDEIDYLVDAFTKLGRNPTDVELMMFAQANSEHCRHKIFNADWTIDGEKQDISLFNMIRNTEKLNPQGTIVAYSDNSAIMAGGMAERWFPRTPANLGASELPEHYRRSTELTHTLMKVETHNHPTAISPFPGAATGAGGEIRDEGATGRGARPKAGLAGFTVSNLELPDGVEAWENARDAAQPLAHRNPGDKHEAYGRPDRIASPLQIMIDGPLGGAAFNNEFGRPNLGGYFRAYEQNVAGLVRGYHKPIMIAGGIGNISDQHTHKHDLPEGSLLIQIGGPGMRIGMGGGAASSMATGTNTAELDFDSVQRGNPEIERRAQEVINACWQLGEKNPILSIHDVGAGGLSNAFPEVVDGAGKGARFDLRKIQLEESGLSPREIWSNEAQERYVLAIAPADLPAFEAMCQRERCPFAVIGTATAERQLKLIDSELNDDNAHQPVDMPMEVLLGKAPRMHRDVKRVERKLEPVDVTGLVLADVATSVLRHPTVASKSFLITIGDRSVGGTTARDQMVGPWQVPVADVAITTMDYAGFRGEAMTMAERTPLAVIDAPASGRMAVGEAVTNIAAAPIASLDKLKLSANWMAACGAAGEDAALYDTVKAIGMELCPALGISIPVGKDSLSMRTKWEDRGVAKEVVAPVSLIISAFAPVEDVRRHLTPQLRRASDVGESVLIAIDLGRGKHRLGGSILAQVTQQVGDTVPDVDDPEDLKRFFAAIQALNQDGKLLAYHDRSDGGLWATVCEMAFAGHVGVSLNVDMLVLDPNHESDYGDAKDWAKQTSGRREDRTIRALFTEELGAVVQVRASERDAVLVALREHGLSACSHVIGKINERDTIEIYRDAKKIYEAPRTELHRTWSEVSWRISRLRDNPACADAEYDALSDAADPGIAPVLNFDPTEDVAAPFVGRSARPRVAILREQGVNSHLETAYAFDRAGFDAHDVHMSDLLAGRANLADFAGAVACGGFSYGDTLGAGEGWAKAIRFNAQLADMFAAFFGRADTFALGICNGCQMMSSLASMIPGAEAWPKFTRNKSEKFEARFSLVEVQASPSIFFNGMEGSRIPVAIAHGEGYADFSQQGDASKVAVAMRYVDHRGQATEQYPFNPNGSPNGITSVTTPDGRFTVLMPHTERVHRAVQMSWHPEGWGEGGTDASPWMRVFQNARRWLG
>NZ_CP008760.1|WP_011488309.1|4849895_4851437_+|peptidase-M35
MNVNRYGSTHQTSHPLALMQPPWGMAAAPARPSPRIHATDGTPRAPIGNVPASPPLGKVPGRAPRVGGLADPIERTGGKAATYTVDGAGKRVRESKDANGNPVRDTWEADGRHTRDSVGADGTRIRDTWEADGKHLHETCDANGKHVLDIWDAKGKHIHEVWDASGKHVLDIWDAQGKHKRIVWHKKHDNLPTSMRTHGLSPGHAGQNGRPMPRPVAGGAPASSPLPGNGNGGSEPSTPGGGGDAGRPVAPIGGSGGQPSAPIGGGGQPSGPAGNGGGQLFAPIGNGGGQLSAPDGDGGGQTSAPIGDNEGQPSTPTGGDSGDIQAPDDNSGDTDYDQPAPGTARTPGMIGFTPAQGGIVTRAYQHVKRMIDSALDKLESGHPDGNFARWFGSPTQRNVQKVEQVFTRMQHAMSHDRFTFVLGAPHDDSELAHVQPGSPHQINLKPHFFDHAFGANTPEATIAHELSHFPYIGNTRDHLYGPAAVAGLAQRNSDMATDNAENYGMFIRAQATA
>NZ_CP008760.1|WP_011488308.1|4851703_4853002_+|FAD-dependent-oxidoreductase
MDVIVIGGGIAGVATAYQLRAAGHRVCVVERHATVAQGATYGHSGTVLPTPLDVWFGPTFMASRQNAKNGIVNKAGFNGPARQLVKQLAELQEPNAFGHQYGLLRPLIELSRDTLADMEARFGLEFEQASGVLYLVRTEQEWQQLRPALGLLRLFEVPHHELTPEQCAAFEHSVRTEPAFAGGVLFDQERTANCPLFTKLIKQTLDTQGDVQFMLGCEVASIRLEGQRAAVELAPRPGAASRSREVDVIHADAVVVAAGHGSLALLERLGLRLPLHPLRLHTLVAPIAHEECAPHVAIVDAVKRIAISRMNHRLRIAGGAVLQSAGQIDKPLGEAVTKEALALLGQATHDWIPGAARISAALPWEGAKLLSPDGLPVIGNALHPRLFVNIGHGPAGWGLACGSGKLVADLISGSAPELPADTLAALRADRFR
>NZ_CP008760.1|WP_011488307.1|4853174_4854776_+|bifunctional-ADP-dependent-NAD(P)H-hydrate-dehydratase/NAD(P)H-hydrate-epimerase
MTEADPTPPTLISPHNRALPLLTLTDLRIAESQAQATLPKHTLMSRAGKSAASFLQEQITRDISIEKSRHKVWLIAGPGNNGGDALVLATELHRAGIAVELCMPVEVKPDDARWALETARAAGVAIGAAVPASLDDYTWLVDGMFGIGLTRPLEGVFADVARRLSQRTQARPRKGGVLALDVPSGLDSDTGTAVGNGNVIGEGAAVHATHTITFIGAKPGLFTAQGRDLAGAVTVAPIGVDTRGRTAVQLNAPELFAAFLPPRDFATNKGSFGSLAVVGGDTGMCGAPILASRAALYTGAGKVHVALLGEGAPPYDPPHPELMLHAIDDLPLDHMDALAVGCGMGHRERATRVMHDVLHLYVPKLFDADALNLISKDPALAAEVTARGVQGDPCILTPHPLEAARLLGTDAPGVQRDRLTAARALAARFASVVVLKGTGTVVAAPDGRLAINPTGNAALATGGTGDVLGGIIGALLAQRLPRYEAALAGVYLHGLAADTLSAQGHGPAGLTAGELAPMVRTLLNRLFYPAADC
>NZ_CP008760.1|WP_011488306.1|4855010_4856633_+|glucose-6-phosphate-isomerase
MTQNSLPSWSSLQTHYEKIRDAHMRDWFAPENDPAPTRAERFAFAGGGLAADFSKNRITDETLKLLVQLAREAGVEKRRDAMFAGAVVNPTEGRAALHTALRATDPKAPFYDQVQAERARMAAFADQVRSGEWKGYTGKRIRYVVNIGIGGSDLGPKMVVHALHHLATPEITTHFVSNVDGADLYNVMQQIDPEETLAIIVSKTFTTLETMTNARSLRDWFVEKGCPESALAKHFVGVSANPAEVVKFGIAKENVFEMWDWVGGRYSLWSAVGLSIMIAVGPQQFGELLAGANEMDQHFRDAPLEKNLPVLLGMIGIWYRNFFGSQSYLVAPYSEALHFLPSYLQQLEMESNGKSARLDGVMVDYPTAAVTWGEPGTNGQHAFFQMLHQGPTIVPIDFIAVLTPEHPLVSHHPKLLANCFAQSEALMLGRTLEEAKKVAGADKPELAPHLVFPGNRPTSTLLVDALTARSLGALIALYEHKVLVQASVWDINPFDQWGVELGKILGKVVEADLTAPSVDEKKHDSSTSALIARARAALKK
>NZ_CP008760.1|WP_007182003.1|4856804_4857491_-|ABC-transporter-ATP-binding-protein
MLNKTDPVIEVRGLCKKVKDATGELTILDDIDLAIAAGSSVAIVGASGSGKSTLLGLLAGLDSASSGSVRLLGRELGELNEDERAALRSGSVGFVFQSFQLMPHLTALENVTLPLELQGGISTREAATRARGLLEQVGLGKRTGHYPKLLSGGEQQRVALARAFVTHPAILFADEPTGSLDAATGHAVIDLMFEMNRANGATLILVTHDIELARRCDTTVTIEAGRLV
>NZ_CP008760.1|WP_038457953.1|4857489_4858194_+|arylesterase
MVKRRLKVRAMTSHATALTTACGCAVMAATLFSASFAARAANAPEPARPVIVVLGDSISAEYGLPRDTGWVALMRQRLTDERIDYSVANASISGDTTSGGRARLPALMQRLKPSIVIVELGANDALRGVPLSTTEDNLRTIIEQAQQGHAKVVLVGMYVPPNYGPDYTQKFHGLYGELSKQLRVPLVPFLLAGIADKPDMFQADQIHPTQQAQPVLLNNVWPAVKPLLRTSSPH
>NZ_CP008760.1|WP_011488304.1|4858312_4858654_+|hypothetical-protein
MKYLPLIALTVAISACAAQPPAGVQSVGQSQQPPKAVATCIAQKWADSSQQQVVSQDTLANDQAMDVYVPGQQPPNGAAAVVRPSYTGKGTWVGFRGNGAAGSDATGAISGCL
>NZ_CP008760.1|WP_011488303.1|4858742_4860680_-|peptidyl-prolyl-cis-trans-isomerase
MLDFFRNHKRLMMFMLILVIVPGLGFVGIQGFRGFFDESANVASVNGHKITRAEYDDAMRQQLDRARQMLGAQFDMKSFDTPERRSQMLDGLIEQRVLADETQRLHLTASDDAVRRVLLNDPVISSLKNPDGTIDVDRYKQLLAMQGMTPDQYDERVRYSIATQQLPASIQGSAFTSKTLAQHLTELAEQQREVQGIAFHPRDYAAKVQPTDAQLQAYYDAHRNDFATPATATIQYLVMSPATLAASVQPGDADLKKYYDDNIAHYRVEGQVRASHILIAAPKDASAADKAKAKQKAEELLAQIKAHPDQFAQIAQQNSQDPGSASKGGDLGYFGRGMIAGGQAFDDAVFALKKDEVSGIVQTDFGYHIVKVTDVKPAVTKPFDEVKDQISKDLKTQLASKAFTDDSEGFTSIVYEKAKSLQPAADKYKLQLQTATVTPQPDPKLAPDSPLNNAKFLAAVFASDAVTAHNNTQAIDVGGNTLIAARVIDYKAAAVPSLDAVKDAVRQKVIAVQSDEAAHKDGAAKLAEFEKSKSTAGFSSPLKVSRNDAQGVPPAALSAIYKVDAQKLPAYVGVDLGDDGYAIYRVNAVVAGAAVDPQRLAAAQQQIAQVDAQSEAEAYLQALRARSKVKFYGSLDSSNAQASSE
>NZ_CP008760.1|WP_007585907.1|4861049_4861322_-|HU-family-DNA-binding-protein
MNKTELIDHIAQQADISKAAAGRALDAVIGGVKGTLKKGGSVTLVGFGTFAVGKRTARTGRNPRTGAAIKIKAAKVPKFRPGKALKDALN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	865559-865584	3	0.885
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1079659-1079684	3	0.885
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1258806-1258831	3	0.885
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	870239-870264	3	0.885
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1084339-1084364	3	0.885
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1263475-1263500	3	0.885
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1258762-1258787	4	0.846
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1263431-1263456	4	0.846
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	445569-445594	4	0.846
NZ_CP008760_2	2.1\|4845219\|26\|NZ_CP008760\|CRISPRCasFinder	4845219-4845244	26	LT599585	Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid	15529-15554	4	0.846
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049158	Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence	1258715-1258740	5	0.808
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP049318	Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence	1263384-1263409	5	0.808
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	445471-445496	5	0.808
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NZ_CP012748	Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence	445520-445545	5	0.808
NZ_CP008760_1	1.1\|3867489\|26\|NZ_CP008760\|CRISPRCasFinder	3867489-3867514	26	NC_018696	Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence	676441-676466	5	0.808

1. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 3, identity: 0.885

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
attgcatgggaccagagtaagcgcta	Protospacer
. ***********************.

2. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 3, identity: 0.885

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
attgcatgggaccagagcaagcgctg	Protospacer
. ***************.********

3. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 3, identity: 0.885

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
tgtgcataggaccggagtaagcgctg	Protospacer
 ******.*****.************

4. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 3, identity: 0.885

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
attgcatgggaccagagtaagcgcta	Protospacer
. ***********************.

5. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 3, identity: 0.885

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
attgcatgggaccagagcaagcgctg	Protospacer
. ***************.********

6. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 3, identity: 0.885

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
tgtgcataggaccggagtaagcgctg	Protospacer
 ******.*****.************

7. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 4, identity: 0.846

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
cttgcatgggaccggactaagcgctg	Protospacer
  ***********.** *********

8. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 4, identity: 0.846

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
cttgcatgggaccggactaagcgctg	Protospacer
  ***********.** *********

9. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.846

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
cttgcatgggacgagagtaagcgcta	Protospacer
  ********** ************.

10. spacer 2.1|4845219|26|NZ_CP008760|CRISPRCasFinder matches to LT599585 (Pseudomonas veronii 1YdBTEX2 genome assembly, plasmid: PVE_plasmid) position: , mismatch: 4, identity: 0.846

tgccacgtgaccgggatggagacttg	CRISPR spacer
agccacttgaccgggatggagacctc	Protospacer
 ***** ****************.*

11. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049158 (Caballeronia sp. SBC1 plasmid pSBC1_2, complete sequence) position: , mismatch: 5, identity: 0.808

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
tttgcatgggaccggactaagcgcta	Protospacer
  ***********.** ********.

12. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP049318 (Caballeronia sp. SBC2 plasmid pSBC2-2, complete sequence) position: , mismatch: 5, identity: 0.808

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
tttgcatgggaccggactaagcgcta	Protospacer
  ***********.** ********.

13. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
tttgcatgggacgtgagtaagcgcta	Protospacer
  **********  ***********.

14. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NZ_CP012748 (Paraburkholderia caribensis MBA4 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.808

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
cttgcatgggacgtgagtaagcgcta	Protospacer
  **********  ***********.

15. spacer 1.1|3867489|26|NZ_CP008760|CRISPRCasFinder matches to NC_018696 (Paraburkholderia phenoliruptrix BR3459a plasmid pSYMBR3459, complete sequence) position: , mismatch: 5, identity: 0.808

ggtgcatgggaccagagtaagcgctg	CRISPR spacer
tctgcatgggacgggagtaagcgcta	Protospacer
  ********** .***********.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

248355 : 294751

Lactococcus_phage(12.5%)

integrase,transposase

attL 250870:250885|attR 279134:279149

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011488089.1\|248355_250857_-	ribonuclease R	Q0GXV6	Lactococcus_phage	2.0e-68	32.6
250870:250885	attL	NA	NA	NA	NA
WP_011488088.1\|251762_253001_+\|integrase	integrase arm-type DNA-binding domain-containing protein	A0A1B0VMI6	Pseudomonas_phage	7.8e-61	35.6
WP_085953580.1\|253520_254694_+\|transposase	IS3-like element ISBxe1 family transposase	A0A0P0I4A4	Acinetobacter_phage	1.3e-62	43.0
WP_085953587.1\|254966_256141_-\|transposase	IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	5.8e-74	46.0
WP_011490266.1\|256228_256696_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_011487048.1\|256695_257049_+	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.2e-16	37.6
WP_011487049.1\|257138_258719_+\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.6e-56	31.9
WP_011488086.1\|259360_260599_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_038456309.1\|261682_262129_-	hypothetical protein	NA	NA	NA	NA
WP_081958693.1\|262668_263139_-	ATP-binding domain-containing protein	A7KV33	Bacillus_phage	4.0e-10	50.8
WP_011487036.1\|263235_264087_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.7e-30	33.7
WP_148222987.1\|265715_267320_-	ATP-dependent helicase	G3MA40	Bacillus_virus	2.4e-14	25.6
WP_011488082.1\|267316_269158_-	AAA family ATPase	NA	NA	NA	NA
WP_011488080.1\|269853_270774_-	nucleoside triphosphate pyrophosphohydrolase family protein	A0A0A0V4I6	uncultured_virus	3.0e-09	43.1
WP_049782142.1\|270787_271879_-	hypothetical protein	A0A249XNQ1	Brevibacterium_phage	5.8e-36	37.1
WP_011488078.1\|271875_272670_-	hypothetical protein	NA	NA	NA	NA
WP_038456316.1\|272666_273521_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_011488076.1\|273520_273841_-	helix-turn-helix transcriptional regulator	A0A1B0T6A7	Bacillus_phage	1.1e-06	34.4
WP_011488075.1\|273842_274133_-	hypothetical protein	NA	NA	NA	NA
WP_148222986.1\|274706_277799_+	hypothetical protein	NA	NA	NA	NA
WP_148311793.1\|278001_279708_-	hypothetical protein	NA	NA	NA	NA
279134:279149	attR	NA	NA	NA	NA
WP_011488072.1\|280079_280913_+	DUF945 domain-containing protein	A0A2C9CYF8	Yersinia_phage	2.1e-46	38.6
WP_038456320.1\|281042_283283_+	ParB/RepB/Spo0J family partition protein	A0A1C9EHW0	Gordonia_phage	4.8e-08	30.8
WP_081435506.1\|283367_283613_+	hypothetical protein	NA	NA	NA	NA
WP_011488070.1\|283513_284287_-	hypothetical protein	NA	NA	NA	NA
WP_011488069.1\|284279_284972_-	protein mobD	NA	NA	NA	NA
WP_011488068.1\|284981_285446_-	hypothetical protein	NA	NA	NA	NA
WP_011488066.1\|286652_287165_-	phosphate-starvation-inducible PsiE family protein	NA	NA	NA	NA
WP_011488065.1\|287374_287932_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_011488064.1\|288022_288436_-	Hsp20/alpha crystallin family protein	NA	NA	NA	NA
WP_011488063.1\|288451_288889_-	Hsp20/alpha crystallin family protein	A0A1B2LRT2	Wolbachia_phage	1.7e-10	34.4
WP_049782140.1\|289151_289439_+	hypothetical protein	NA	NA	NA	NA
WP_049782139.1\|289413_289647_+	hypothetical protein	NA	NA	NA	NA
WP_011488060.1\|290088_291318_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_081435505.1\|291516_291750_-	DUF3460 family protein	NA	NA	NA	NA
WP_038458019.1\|292417_292699_-	hypothetical protein	NA	NA	NA	NA
WP_011488055.1\|294322_294751_+\|transposase	transposase	A0A1B0YZU7	Pseudomonas_phage	4.5e-08	47.5

DBSCAN-SWA_2

797997 : 810421

Burkholderia_phage(20.0%)

plate,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_148222980.1\|797997_798693_-	hypothetical protein	A9YX14	Burkholderia_phage	4.0e-46	53.6
WP_011487648.1\|799041_800109_-	hypothetical protein	NA	NA	NA	NA
WP_011487647.1\|800105_800753_-	DUF2313 domain-containing protein	M1FPN6	Enterobacteria_phage	6.6e-19	32.0
WP_011487646.1\|800759_801920_-\|plate	baseplate J/gp47 family protein	A0A2P9JZK6	Alteromonadaceae_phage	8.4e-33	30.3
WP_011487645.1\|801921_802371_-	hypothetical protein	A0A2P9JZK5	Alteromonadaceae_phage	4.9e-21	43.8
WP_011487644.1\|802374_802902_-\|plate	phage baseplate assembly protein	A0A192Y8K5	Salmonella_phage	1.2e-26	46.5
WP_011487643.1\|802934_804008_-\|tail	phage tail protein	U5P0H6	Shigella_phage	1.8e-45	35.9
WP_011487642.1\|804010_805438_-	multidrug DMT transporter	U5P4I0	Shigella_phage	3.9e-24	27.7
WP_011487641.1\|805434_807159_-	hypothetical protein	Q4L1H3	Burkholderia_phage	1.3e-13	29.6
WP_011487640.1\|807324_807885_-\|tail	phage tail assembly protein	NA	NA	NA	NA
WP_011487639.1\|807888_808257_-\|tail	phage tail protein	NA	NA	NA	NA
WP_148222919.1\|808320_808764_-	hypothetical protein	Q6J1P3	Burkholderia_virus	4.1e-12	56.5
WP_011487637.1\|808924_810421_-\|tail	tail protein	B5TK67	Pseudomonas_phage	3.1e-112	47.6

DBSCAN-SWA_3

822372 : 828525

Erwinia_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_049782104.1\|822372_822795_-	hypothetical protein	A0A173GFA2	Erwinia_phage	2.1e-18	37.3
WP_049782103.1\|822998_823469_-	hypothetical protein	A0A1I9KFA7	Aeromonas_phage	1.4e-07	45.8
WP_148222917.1\|823462_823816_-	hypothetical protein	NA	NA	NA	NA
WP_038456571.1\|823812_824130_-	hypothetical protein	NA	NA	NA	NA
WP_038456573.1\|824132_824447_-	hypothetical protein	A2I2Y8	Vibrio_virus	1.3e-09	38.7
WP_085953603.1\|824505_824715_-	hypothetical protein	NA	NA	NA	NA
WP_049782226.1\|824767_825073_-	hypothetical protein	T1SA23	Salmonella_phage	3.8e-25	59.6
WP_011487615.1\|825459_825753_-	hypothetical protein	NA	NA	NA	NA
WP_038456576.1\|825749_825950_-	hypothetical protein	NA	NA	NA	NA
WP_011487614.1\|825946_826213_-	hypothetical protein	NA	NA	NA	NA
WP_011487613.1\|826209_826626_-	hypothetical protein	NA	NA	NA	NA
WP_011487612.1\|826625_826850_-	hypothetical protein	NA	NA	NA	NA
WP_011487611.1\|826846_827953_-	hypothetical protein	C5IHL2	Burkholderia_virus	4.1e-29	50.7
WP_011487610.1\|827949_828525_-	hypothetical protein	A0A1X9SGP3	Bradyrhizobium_phage	6.2e-05	35.4

DBSCAN-SWA_4

1260132 : 1303317

Bacillus_virus(33.33%)

tRNA,integrase,transposase

attL 1290722:1290738|attR 1305915:1305931

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011487261.1\|1260132_1261395_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_011487260.1\|1261456_1262545_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_007175919.1\|1262893_1263547_+	OmpA family protein	G3M9Z0	Bacillus_virus	2.4e-08	36.0
WP_011487259.1\|1263910_1266043_+\|tRNA	methionine--tRNA ligase	K7Y9Y6	Megavirus	4.0e-49	28.6
WP_011487258.1\|1266178_1270486_-	DUF490 domain-containing protein	NA	NA	NA	NA
WP_011487257.1\|1270514_1272350_-	outer membrane protein assembly factor	NA	NA	NA	NA
WP_007175923.1\|1272746_1272932_+	DUF3460 family protein	NA	NA	NA	NA
WP_007175924.1\|1272936_1273812_+	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	6.4e-09	25.1
WP_011487256.1\|1273999_1274833_+	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_007175926.1\|1274884_1275271_+	aspartate 1-decarboxylase	NA	NA	NA	NA
WP_007175927.1\|1275424_1276063_-	ParA family protein	B0ZSI1	Halomonas_phage	6.9e-13	29.4
WP_007175928.1\|1276274_1276694_+	PaaI family thioesterase	NA	NA	NA	NA
WP_049782220.1\|1276975_1278436_-	cobyric acid synthase	NA	NA	NA	NA
WP_011487254.1\|1278574_1279129_+	bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase	NA	NA	NA	NA
WP_007175931.1\|1279128_1280064_+	cobalamin biosynthesis protein	NA	NA	NA	NA
WP_038458206.1\|1280098_1281139_+	threonine-phosphate decarboxylase	NA	NA	NA	NA
WP_011487252.1\|1281197_1282109_+	cobalamin-binding protein	NA	NA	NA	NA
WP_011487251.1\|1282145_1282736_-	alpha-ribazole phosphatase	NA	NA	NA	NA
WP_007175935.1\|1282720_1283497_-	adenosylcobinamide-GDP ribazoletransferase	NA	NA	NA	NA
WP_007175936.1\|1283539_1284601_-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase	NA	NA	NA	NA
WP_011487250.1\|1284637_1285477_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.8e-13	26.1
WP_081435486.1\|1285473_1286574_-	iron ABC transporter permease	NA	NA	NA	NA
WP_011487248.1\|1286613_1288485_-	TonB-dependent receptor	NA	NA	NA	NA
WP_007175940.1\|1289040_1289397_+	hypothetical protein	NA	NA	NA	NA
WP_007175941.1\|1289393_1289708_+	cell division protein ZapA	NA	NA	NA	NA
WP_148222906.1\|1290490_1290826_+	hypothetical protein	NA	NA	NA	NA
1290722:1290738	attL	NA	NA	NA	NA
WP_038456778.1\|1290870_1292925_+	hypothetical protein	NA	NA	NA	NA
WP_085953574.1\|1292917_1293729_-\|transposase	IS5 family transposase	NA	NA	NA	NA
WP_011487242.1\|1293867_1296057_+	hypothetical protein	NA	NA	NA	NA
WP_011487241.1\|1296034_1296538_+	hypothetical protein	NA	NA	NA	NA
WP_011487240.1\|1296530_1298054_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_011487239.1\|1298094_1298556_-	EVE domain-containing protein	NA	NA	NA	NA
WP_011487238.1\|1298656_1298899_-	hypothetical protein	NA	NA	NA	NA
WP_011487237.1\|1298919_1299990_-\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_011487236.1\|1301058_1301814_+\|transposase	IS5 family transposase	A0A0N9SHJ4	Paenibacillus_phage	7.6e-19	39.3
WP_011487235.1\|1302168_1303317_-\|transposase	IS110 family transposase	NA	NA	NA	NA
1305915:1305931	attR	NA	NA	NA	NA

DBSCAN-SWA_5

1538545 : 1565064

Acidithiobacillus_phage(33.33%)

integrase,transposase

attL 1531407:1531425|attR 1566297:1566315

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1531407:1531425	attL	NA	NA	NA	NA
WP_011487049.1\|1538545_1540126_-\|transposase	IS66 family transposase	A0A218MNE7	uncultured_virus	5.6e-56	31.9
WP_011487048.1\|1540215_1540569_-	IS66 family insertion sequence element accessory protein TnpB	S5VXZ8	Leptospira_phage	2.2e-16	37.6
WP_011490266.1\|1540568_1541036_-	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA
WP_011487046.1\|1541096_1541867_-	ATP-binding protein	K4HZD4	Acidithiobacillus_phage	5.2e-63	50.0
WP_011487045.1\|1541876_1543415_-\|transposase	IS21 family transposase	K4I413	Acidithiobacillus_phage	9.8e-130	47.2
WP_011487044.1\|1544124_1544661_-	NERD domain-containing protein	NA	NA	NA	NA
WP_038456902.1\|1544724_1545348_-	hypothetical protein	NA	NA	NA	NA
WP_011487040.1\|1547519_1548617_+\|integrase	integrase	NA	NA	NA	NA
WP_011487039.1\|1548626_1548995_+	hypothetical protein	NA	NA	NA	NA
WP_011487036.1\|1550865_1551717_-	ATP-binding protein	A0A059NT77	Lactococcus_phage	1.7e-30	33.7
WP_011487035.1\|1551713_1553228_-\|transposase	IS21 family transposase	NA	NA	NA	NA
WP_158340923.1\|1556288_1556447_+	hypothetical protein	NA	NA	NA	NA
WP_011487026.1\|1557872_1558898_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_038456906.1\|1562315_1563644_+	putative sugar O-methyltransferase	NA	NA	NA	NA
WP_085953577.1\|1563880_1565064_-\|transposase	IS3-like element ISBxe2 family transposase	A0A0P0I4A4	Acinetobacter_phage	9.7e-53	37.0
1566297:1566315	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1595681 : 1606951

Enterobacteria_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011486997.1\|1595681_1600016_-	glycosyltransferase	Q854P7	Mycobacterium_phage	5.6e-13	43.5
WP_011486996.1\|1600012_1601359_-	ABC transporter ATP-binding protein	NA	NA	NA	NA
WP_011486995.1\|1601348_1602179_-	ABC transporter permease	NA	NA	NA	NA
WP_011486994.1\|1602175_1602727_-	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	5.5e-51	59.1
WP_011486993.1\|1602723_1603602_-	glucose-1-phosphate thymidylyltransferase RfbA	K7QKA7	Escherichia_phage	9.0e-96	60.3
WP_011486992.1\|1603611_1604529_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	7.8e-26	35.7
WP_011486991.1\|1604521_1605574_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	2.3e-85	47.8
WP_007178983.1\|1606039_1606951_-	NAD-dependent epimerase/dehydratase family protein	E5ES47	Bathycoccus_sp._RCC1105_virus	4.3e-08	25.2

DBSCAN-SWA_7

3239839 : 3249409

Streptococcus_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011489642.1\|3239839_3241945_-	elongation factor G	E4ZFJ7	Streptococcus_phage	5.9e-61	26.9
WP_011489641.1\|3242305_3242812_-	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	9.4e-13	39.2
WP_011489640.1\|3242957_3243152_-	hypothetical protein	NA	NA	NA	NA
WP_011489639.1\|3243608_3244178_-	pseudouridine synthase	NA	NA	NA	NA
WP_011489638.1\|3244511_3245768_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	2.3e-12	64.8
WP_007180614.1\|3246043_3246250_-	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	2.4e-23	81.8
WP_006050100.1\|3246800_3247115_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	5.8e-13	44.6
WP_011489636.1\|3247111_3249409_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	7.2e-169	41.6

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP008761

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP008762

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP008760

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection