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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP008835 Burkholderia pseudomallei strain BGR chromosome 2, complete sequence 3 crisprs DinG,csa3,cas3 0 0 4 0
NZ_CP008834 Burkholderia pseudomallei strain BGR chromosome 1, complete sequence 0 crisprs WYL,cas3,DEDDh,csa3,DinG 0 0 10 0

Results visualization

1. NZ_CP008835
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008835_1 277601-277765 Orphan NA
2 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008835_2 1470500-1470592 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP008835_3 1897655-1897800 Orphan NA
2 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 879070 : 907713 21 Agrobacterium_phage(33.33%) plate,transposase NA
DBSCAN-SWA_2 1598285 : 1656114 33 Streptococcus_phage(16.67%) transposase,integrase attL 1598074:1598133|attR 1651240:1651409
DBSCAN-SWA_3 2531163 : 2553138 20 Leptospira_phage(42.86%) transposase,integrase attL 2541662:2541721|attR 2553147:2554382
DBSCAN-SWA_4 2704651 : 2776418 55 Vibrio_phage(25.0%) plate,holin NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP008834
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 499095 : 510047 10 Agrobacterium_phage(16.67%) protease NA
DBSCAN-SWA_2 1287223 : 1295662 10 Burkholderia_phage(50.0%) portal,protease NA
DBSCAN-SWA_3 1518336 : 1563329 59 Burkholderia_phage(58.49%) head,integrase,holin,terminase,lysis,tail,portal,plate,capsid,transposase attL 1527113:1527159|attR 1563393:1563439
DBSCAN-SWA_4 1752650 : 1846012 101 Burkholderia_phage(76.27%) head,holin,terminase,protease,tail,portal,plate,capsid,tRNA NA
DBSCAN-SWA_5 2170419 : 2179663 7 Hokovirus(16.67%) NA NA
DBSCAN-SWA_6 2517058 : 2525901 8 Bacillus_phage(16.67%) NA NA
DBSCAN-SWA_7 2789122 : 2881088 102 uncultured_Caudovirales_phage(22.22%) head,integrase,terminase,protease,tail,portal,plate,capsid,tRNA attL 2797913:2797931|attR 2856109:2856127
DBSCAN-SWA_8 3079682 : 3085373 9 Burkholderia_virus(50.0%) transposase NA
DBSCAN-SWA_9 3862109 : 3934942 55 Klosneuvirus(14.29%) plate,tRNA,coat,transposase NA
DBSCAN-SWA_10 3985533 : 4050934 83 Burkholderia_virus(95.95%) head,integrase,holin,terminase,protease,tail,portal,capsid attL 3996198:3996246|attR 4051064:4051112
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage