CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP006693	Salmonella enterica subsp. arizonae serovar 62:z36:- str. RKS2983 chromosome, complete genome	1 crisprs	cas3,DEDDh,DinG,PD-DExK	1	1	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006693_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006693_1

967463-968031

Orphan

Consensus_repeat	Method
TAGTCCTGNCGGCAGCGCCGGCAGGCTGG	CRT

9 spacers

The CRISPR arrays of NZ_CP006693_1

>merge|NZ_CP006693|1|967463-968031|CRT
TAGTCCTGGCGGCAGCGCCGGCAGGCTGGGCAGCTGGTTATCAAACACCACCAGCTCCTCTAGTCCTGGCGGCAGCGCCGAGAGGCTGGTCAGTCGGTTATTAGTGGCCCATAGCGACTGTAGTCCTGGCGGCAGCGCTGACAGGTGGGTCAGTAGGTTATGAGATACCGACAGTTTCTGTAGTCTTAGCGGCAGCGCTGGCAGGCTGGCCAGCTGGTTATCATCTACCGACAGCTCCTCTAGTCCTGGCGGCAGCGCCGGCAGGCTGGCCATCTGGTTATGAGAGGCCGACAGCGACTGTAGTCCTGACGGCAGCGCCGGCAGGCTGGGCAGCAGGTTACCATCTACCGACAGCTCCCGTAGTCCTGGCGGCAGCGCCGGCAGGCTGGCCAGTTGGTTATTAAAGGCCCACAGCTTACATAGTCCTGACGGCAGCTCCGGCAGGCTGGTCAGCGGGCTCTCAACAACAATCAGCTCCCTTAGTCCTGACGGCAGCGCCGGCAGGCTGGGCAGCTGGTTACCAGCGAAAATCAGCTCCTGTAGTCCTGCCGGCAACGCCGGCAGGCGGG

>NZ_CP006693|1|1|967463-968031|CRT
TAGTCCTGGCGGCAGCGCCGGCAGGCTGG	GCAGCTGGTTATCAAACACCACCAGCTCCTC
TAGTCCTGGCGGCAGCGCCGAGAGGCTGG	TCAGTCGGTTATTAGTGGCCCATAGCGACTG
TAGTCCTGGCGGCAGCGCTGACAGGTGGG	TCAGTAGGTTATGAGATACCGACAGTTTCTG
TAGTCTTAGCGGCAGCGCTGGCAGGCTGG	CCAGCTGGTTATCATCTACCGACAGCTCCTC
TAGTCCTGGCGGCAGCGCCGGCAGGCTGG	CCATCTGGTTATGAGAGGCCGACAGCGACTG
TAGTCCTGACGGCAGCGCCGGCAGGCTGG	GCAGCAGGTTACCATCTACCGACAGCTCCCG
TAGTCCTGGCGGCAGCGCCGGCAGGCTGG	CCAGTTGGTTATTAAAGGCCCACAGCTTACA
TAGTCCTGACGGCAGCTCCGGCAGGCTGG	TCAGCGGGCTCTCAACAACAATCAGCTCCCT
TAGTCCTGACGGCAGCGCCGGCAGGCTGG	GCAGCTGGTTACCAGCGAAAATCAGCTCCTG
TAGTCCTGCCGGCAACGCCGGCAGGCGGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006693.1\|WP_000598912.1\|973681_974437_+\|DgsA-anti-repressor-MtfA	unknown	unknown	gnl\|CDD\|185308
NZ_CP006693.1\|WP_000280762.1\|971087_971858_+\|N-acetylmuramoyl-L-alanine-amidase	unknown	unknown	gnl\|CDD\|225567
NZ_CP006693.1\|WP_077916608.1\|956497_957217_-\|integrase-arm-type-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
NZ_CP006693.1\|WP_038395677.1\|958266_959763_-\|C69-family-dipeptidase	unknown	unknown	gnl\|CDD\|335383
NZ_CP006693.1\|WP_000400306.1\|954373_955828_-\|AMP-nucleosidase	unknown	unknown	gnl\|CDD\|236222
NZ_CP006693.1\|WP_077916553.1\|974819_975008_+\|DUF4102-domain-containing-protein	unknown	unknown	gnl\|CDD\|379139
NZ_CP006693.1\|WP_128971899.1\|975501_976664_+\|IS3-family-transposase	unknown	unknown	gnl\|CDD\|222853
NZ_CP006693.1\|WP_071841344.1\|978804_978993_+\|cold-shock-protein	unknown	unknown	unknown
NZ_CP006693.1\|WP_038395667.1\|945117_947214_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_CP006693.1\|WP_038395693.1\|982067_983498_+\|DNA-cytosine-methyltransferase	unknown	unknown	gnl\|CDD\|236696
NZ_CP006693.1\|WP_000786010.1\|983478_983949_+\|very-short-patch-repair-endonuclease	unknown	unknown	gnl\|CDD\|226250
NZ_CP006693.1\|WP_000829183.1\|964989_966015_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226361
NZ_CP006693.1\|WP_000208505.1\|978581_978794_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP006693.1\|WP_001022120.1\|962304_963282_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270265
NZ_CP006693.1\|WP_071841288.1\|971877_972210_-\|phage-tail-protein	unknown	unknown	gnl\|CDD\|367075
NZ_CP006693.1\|WP_072159169.1\|980910_981222_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006693.1\|WP_038395672.1\|953140_953548_+\|DNA-mismatch-endonuclease-Vsr	unknown	unknown	gnl\|CDD\|226250
NZ_CP006693.1\|WP_038395670.1\|947233_953071_+\|DEAD/DEAH-box-helicase	unknown	unknown	gnl\|CDD\|350681
NZ_CP006693.1\|WP_038395683.1\|963295_965002_+\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224099
NZ_CP006693.1\|WP_038395664.1\|942544_945094_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP006693.1\|WP_000598912.1\|973681_974437_+\|DgsA-anti-repressor-MtfA	gnl\|CDD\|185308	PRK15410, PRK15410, DgsA anti-repressor MtfA; Provisional.	0
NZ_CP006693.1\|WP_000280762.1\|971087_971858_+\|N-acetylmuramoyl-L-alanine-amidase	gnl\|CDD\|225567	COG3023, ampD, N-acetyl-anhydromuramyl-L-alanine amidase [Cell envelope biogenesis, outer membrane].	3.88173e-98
NZ_CP006693.1\|WP_077916608.1\|956497_957217_-\|integrase-arm-type-DNA-binding-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	6.95377e-27
NZ_CP006693.1\|WP_038395677.1\|958266_959763_-\|C69-family-dipeptidase	gnl\|CDD\|335383	pfam03577, Peptidase_C69, Peptidase family C69.	3.96427e-137
NZ_CP006693.1\|WP_000400306.1\|954373_955828_-\|AMP-nucleosidase	gnl\|CDD\|236222	PRK08292, PRK08292, AMP nucleosidase; Provisional.	0
NZ_CP006693.1\|WP_077916553.1\|974819_975008_+\|DUF4102-domain-containing-protein	gnl\|CDD\|379139	pfam13356, Arm-DNA-bind_3, Arm DNA-binding domain. This DNA-binding domain is found at the N-terminus of a wide variety of phage integrase proteins.	3.30213e-11
NZ_CP006693.1\|WP_128971899.1\|975501_976664_+\|IS3-family-transposase	gnl\|CDD\|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	5.29555e-61
NZ_CP006693.1\|WP_038395667.1\|945117_947214_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	2.19485e-08
NZ_CP006693.1\|WP_038395693.1\|982067_983498_+\|DNA-cytosine-methyltransferase	gnl\|CDD\|236696	PRK10458, PRK10458, DNA cytosine methylase; Provisional.	0
NZ_CP006693.1\|WP_000786010.1\|983478_983949_+\|very-short-patch-repair-endonuclease	gnl\|CDD\|226250	COG3727, Vsr, DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair].	6.95835e-90
NZ_CP006693.1\|WP_000829183.1\|964989_966015_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	9.20205e-132
NZ_CP006693.1\|WP_000208505.1\|978581_978794_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	3.41114e-38
NZ_CP006693.1\|WP_001022120.1\|962304_963282_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270265	cd13547, PBP2_Fbp_like_2, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic domain (Fbp) has high affinity for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	4.70253e-108
NZ_CP006693.1\|WP_071841288.1\|971877_972210_-\|phage-tail-protein	gnl\|CDD\|367075	pfam02413, Caudo_TAP, Caudovirales tail fibre assembly protein, lambda gpK. This family contains bacterial and phage tail fibre assembly proteins. E.coli contains several members of this family although the function of these proteins is uncertain. Using the lambda phage members as examples, there are both gptfa and gpK tail proteins here. GpK forms part of the TTC or tail-tip complex that is located at the distal end of the tail. TTCs form the platform on which the tail-tube proteins self-assemble and are also the attachment point for fibers or receptor-binding proteins that mediate phage-adsorption to the surface of the host cell. TTC assembly starts with gpJ, which is also known as the central tail fibre and is involved in host-cell adsorption. It is the C-terminus of gpJ that interacts with the lamB receptor on host cells. A number of intermediates including gpK then interact with gpJ during tail morphogenesis.	6.10309e-27
NZ_CP006693.1\|WP_038395672.1\|953140_953548_+\|DNA-mismatch-endonuclease-Vsr	gnl\|CDD\|226250	COG3727, Vsr, DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair].	8.6975e-49
NZ_CP006693.1\|WP_038395683.1\|963295_965002_+\|iron-ABC-transporter-permease	gnl\|CDD\|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	6.91133e-91
NZ_CP006693.1\|WP_038395670.1\|947233_953071_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|350681	cd17923, DEXHc_Hrq1-like, DEAH-box helicase domain of Hrq1 and similar proteins. Yeast Hrq1, similar to RecQ4, plays a role in DNA inter-strand crosslink (ICL) repair and in telomere maintenance. Hrq1 lacks the Sld2-like domain found in RecQ4. Hrq1 belongs to the type II DEAD box helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.	2.22662e-15

>NZ_CP006693.1|WP_000829183.1|964989_966015_+|ABC-transporter-ATP-binding-protein
MAELRLEQLSKIFGNQTVVQKLDLTIPQGSFTAILGPSGCGKTTTLRIIAGLEQPSTGCLFLGSRLLANKIISLPPEQRNMGMVFQSYALWPHMTVEENVGYPLRLRQISSNIYKKRVMEALEAVELLAYSGRSPHELSGGQRQRVALARCLISNPEVILLDEPLSNLDRYLRTTMEKIFRELHHRTGTTFVYVTHDQAEAMALASHIAVMYKGTLVQWGIPQQIYEHPNNVWIAKFIGKGCILSLSIPGSEQFLDCTMLHQGFTQDRRVTYHNVLIRPEHVHLKNKGLPAKVENCIYQGERYLLELRLVDGQLLTAFHHSSVQPQQLVCIQLMQGWRLPK
>NZ_CP006693.1|WP_038395683.1|963295_965002_+|iron-ABC-transporter-permease
MLQYQSINHNRYKWWSWLLFCFITLLILLPILQLFIFAITDWQHGRNSNLWHVLSNPLTWTALYNSLYTSGLGTLFSLLLGNLFAFCLVLTNIRIKQITFFLVMLPMMIPPQITAMSWLQLFRQVGIFFNRIGLSQGFGWPNPLYSAEGIALLLGIQNTPLVFLLIQTQLKYLPQEYIEAARLSGASFWKTFHDISLPLCRSTIWAGAAIAFVSSLGNFGIPAMLGIPISLLVLPVYIYQILSSFGPAVLNEVAALSVLTGVLTIGIMILQKHMQRHYAFPLIGTTDNTLIFLLSNKWRIVIEILLSILIFSIVIAPLLALITTSLVPTTGVILNSDTFTLSAWKIIFDTQSATWRAILNSLLLSVSASLILMLLSLPLAWLLVRHPTRSLLWLYNILDIPYALPGVVLAISFILLFAHPLPLLDISLNGTLTIIFFAYMARFFTVCIKPVYSCMLQLDAAMEEAASLAGANVFQQFSHIVVPLLGPTAFSGAFLVFLSTIHELTVSALLWGPGKETLGVVIFNLYESGDIVQASAISVVVVIIVVLAMLLLNICSKFLPKGVMPWQN
>NZ_CP006693.1|WP_001022120.1|962304_963282_+|ABC-transporter-substrate-binding-protein
MNIKKIITTILLIFISIPIFAKSVLVLYTSQPIEDAQVTVNTFEKHHPDIEVKWIRDGTTKLMTRIQAELAAGGETPDVLLIADSLSMESLKHQGLLTAYKSPQAKHFQSWLYDKNGYYYGTKMITTGIAYHSNAPVKPTSWLDLIKPELKNMTTLPSPLYSGAAQIHQATLMNNSRLGWSYYEKLRKNGAMPQSGNGAVLSAIVSGDKAYGFLVDYMAIRAKAKGAPIEFVFPKEGVSIVTEPVAIMKASKNPQGAKKFIDFLLSKEGQNMVLQQGYIPADAALPVPEGFPPRNSIKLMPFNRAKALTNTEVNKKCFAELFGSH
>NZ_CP006693.1|WP_038395677.1|958266_959763_-|C69-family-dipeptidase
MFSFKKCVLALSINLAFISSGFSCTTLLVGNEASSDGSMIVARSADSDAMKAQHFVIHPAMHNQTGMYSTKAHNGANDFTWPLPKESLRYTTVPNWKTQLHGATGFNEAGVGVSGTESIFASPKALAFDPYVEDKGITEDDIPDILLSQTKTAREAIALLGHIIETVGAGEGFGVAVVDDNEIWYLETATGHQWMAQRLPADQYFATGNQGRLQNYDPNDANMMGSKSLVAFATEKGLYNPQKDGKFNFSKAYTRDDERDRTYNDPRVWTIQQKFNPSVKQDMTAGRLFPVFMTPEKKMTLDDVKAVLRSHYEGTKHDPYSNGLNGKEPWRPVSVFRTYEAHVMQVRPWLPKEIGEVSYIGLGMADLTAFVPYYSGLKAYPANYTMGTDKADSQSIYWKYRKLQTLTMTDYPKLAPIVKKAYAEWEAKIAKEQQEVEAEYLNMAKTNKDAADKMLNDFNLRIMADAEKLTEALTNQLFTLRTQDIQSDIFFANAAKKD
>NZ_CP006693.1|WP_077916608.1|956497_957217_-|integrase-arm-type-DNA-binding-domain-containing-protein
MRLIWWSDLGSGWFDSGVLPKGSLNDPKIRNLKPSFKPVKLSDSHGLHLLANPGGSRIWYLKYRFNGKEPRVSLDAYPLVSLAGARQQRDGVRKLLAQNINPAQQRMADKAAASPEKCFKAVALAWHKTNKKWSSDSATRILASMKNHIFPAIAHLPVTTLKTQHFTALLRVIEDKGFLEVASRTRQQLCNIMCYAVQQGLTENNPALHLEGVTAPPVKNHYPALPLERLPELLERIGD
>NZ_CP006693.1|WP_000400306.1|954373_955828_-|AMP-nucleosidase
MEHKGTNLTPEQALDRLEELYEQSVNALREAIASYIDNGTLPDPHARLNGLFVYPSLSVSWDGATPNLPKTRAFGRFTHPGCYTTTVTRPALFRAYLLGQLNLVYQDYGAHIAVEASHHEIPYPYVIDGSALTLDRSMSADLTRHFPTTELAQIGDETADGLFHPGEFYPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDPNSPYIALSCAGGIWITAETEAPEEAISDLAWKKHQMPAWHLVTADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVLAHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKAVSRMPGEEVKQRLRTGTVVTTDDRNWELRYSASALRFNLSRAVAIDMESSTIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLRAEGDRLHSRKLRTFNEPPFR
>NZ_CP006693.1|WP_038395672.1|953140_953548_+|DNA-mismatch-endonuclease-Vsr
MDTLTPAERSYVMSRVKGKNTSPERIVRRLVYHAGFRYRLCDPRLPGKPDLVFWGRRKAIFVHGCFWHGHEGCRRNRRPKSNQEYWSAKLERNRARDSLNLLKLHEMGWQVLVVWECELKETDILLGRLKAFLKE
>NZ_CP006693.1|WP_038395670.1|947233_953071_+|DEAD/DEAH-box-helicase
MLDPIGGFRRIQDFFISYIETNFRIADPSVAASRRELLNSNGEFAAEPYIEPVLRYASSNKTLEDLADMENGPLNNLSPEGRRAFVELALSGLFDSKSGDAAWPRRSVHTPYLHQAKMLERGIRPGCPGIVTSGTGSGKTESFMLPILAALSNEAISWPVPCDGYLRNRWWNNEEANWVSRRKGEKRPAAVRALVLYPMNALVEDQMARLRKTLDSDEARQTMEHHFAGNRIFFGQYTSATPVTGYASHPRLSGDRSEKNRRARNLEKLRKALNRIDCNQQAARAFDENKNEKSSEKTRYIFPSTDGGEMVSRWDMQAAPPDVLVTNASMLGAMLSREVEDAIFDMTREWLMNNDDAYFYLVFDELHLMRGSAGTETAMLIKSLIIRLGLDDPKHRYKLRLLASSASLPMDGADGEQSRKYLRDLFAPFGTYRDSRDTGSDAPDFWRNCVIEGAPFIPEPERKVDARPFAALMRTALAGQGDAVRRVEMTDEFERALFNAFQALGVKERDSRQGIKPAAEIAAALLTNACIEKNGDKPRATAPKHIIDKIFLEKSWNGEEESELALRGLMLLRALPDSGLASEKPDAATPAFRVHTFVRNIEGFFASVWPGERKAKFADFCLERGLSHAPSASGEKRGRRLFEMLYCEACGDLLLGGQRGQSCEGATVELLPSATNLENLPERPGAEYYDDMTLDEFAVFWPVEKTPAASEKGWDVWQKAALNPVTGIVTVGQETSATNAETVHGYLYFQNPPPAKKGEPVKPPSAQPFCCPNCGIDYSSRPATNRARTPIRAFRTGVTKSSQLVATELFELLHAIGADAKSIVFSDSRQDAASMALEIERLHLRDLRREILVAAAREMISDAEKEYIPEEEFKEKRDKAIQAGDDDTLERLYELKTNQKGIANLCKFRRVKIDSLLESGGDSIGKISSELAGLGISPYKYRPSADGDDKAVWYDNFIKDKNIVKYHEKLSLSDRLAIKQRIIDDQSELIDDVIFANTFFALEETGLAYPCVSDNENTPELDAWLRVFAGVYRVKENKYVDPEQSDSWHVGKDVKKAKVKRLARALFGDDNYLDNLTQVLNQFAARGHTAGLLNIGKLFLKVAKSGDPYWECGNCGRIHLHLGFKRCTRCAEQLDITPKDSVEALWEQNFLGKRIARGERDGVKRFRLNVEELTGQTDDFSDRLRKFKGIFVDKMSELEKLDAEIDMLAVTTTMEVGIDIGSLQSVYQANMPPQRFNYQQRVGRAGRRGQAFSFVITFCRGRTHDAYYFAHPHAITGDPPPPPFLAVDHDAIPLRLLRKVWLRSAFNLLREEDCEKKVDFPGDKLVPPDVHGEYVSTHDYYYDDNANWAERLQGALEATQSIRERFIEAATFDPKQRQRLYSALNAKKIIDEIAELSAYAPDDNLGLARFLAERGKLPMYGMPTRVRNLYLGLREKKGLNNQTEYEWSTMDRDLDLAVFEYAPGSVLIKDKKKHKVIGFTGNYREPQIRDNRVLDLSTVGSWQESSSHVAFCPACGSAKLELRQPDNDIDCKDCGAPIKPDEFKLYITPAAFRTDFEPKDDMDSFTRMSLRTTATVLNEEIPTRCDPLIIRRGEVTILRLNDGPINGEKEGERFTIDLASDQKAPVPFAAYRLSIKGEQAIDSNWLRERDNSRWRRKGEKKNFGLVSGKETESLHLELIRFDSRLNLNMVARYGEYMHLPTRAAAISAIQILTHKAALYLDVSPDEFETLEPRLHFGKPILQIADALINGSGLCRRLAEPAVAGDSPLIIKLLHEILEDERGWPMVDFLKKDHPVQCRTACYKCIQRYGNRRYHGLLDWRLGIAYLRAMVTPEFACGLNPEDWNHPEMKGWKERAFELAEDVEALRPGTITLLKEYSLPVLTEIKDGKELWRAAVAHPLWRWRDAERDALIDAFGLDDKGVPLRFIDTFELERRPLRALAQLKRG
>NZ_CP006693.1|WP_038395667.1|945117_947214_+|hypothetical-protein
MKDIPWYIGRYDRRNDRFSYFKVVAQQTDKGWHAIDNPKKMFPRTGEVELTGFDASKLRPNDWIVFQVDSGARSKLARAKNPCRIYPYYDLSPAQTLLESRRRLSLEGIETCGEPGLWAIRFEAGGVILANLAESKPGCFILSRNQNVAEYAFNDGGLIAVSGLSKNNQMFYMPGADASPTRLHDWTPDKNYIENAAQLIADADSSMMIATWLRKHADGQNGKLKSGVDDLLAAAQALRSGELAKKLEEEDSLSRELAKALLNDGHIAALLERQIQNIAEEERTRLRSEQRKALDAAFSDERLRRREAIEAEMTLFQTERKSEIERQIAQSRLDEEERLRAEFAEKRLSIEKTLKHEKDAFESEIDRLKNAAADLCRQNESQRQTLSSLEAERAVSSSALRDAEERVALARSELEKINAAIVEKARRMAHATIPEIRLPAEAKTVSRIELDRIVSEHNLLTSEGKILMEKFLTLTLAGECPLLYGPETQDFLAIAASLISSGRAIRQIADPTMITYEDLWVRAGSGLATPLYQGLLLSDALRPRTIFAVIERVECSAARFWLPALKDGLRNGDLPRRFLVCGTMANEDGEEAEKIKEEHLFLQVENIVDRNAITRAPLYLSARRHSELDPGAAPPESLAEVLAIAEEMSGGRLNAVNTLRATKAALEAAVSGDKDKTIRQKRLVDLFVNLQNSEICAP
>NZ_CP006693.1|WP_038395664.1|942544_945094_+|hypothetical-protein
MNWTPPVTFDGWESKLVGYFLRFGTDDDARDIRWFEVTPSTLAAAFSDSGASADEIEKAFQAYMSKIPDLPLRLESGMMERSNDKSPGYFTYLVMTLLVSSQFDAQEESNDFRLKLQSWLQTEHSYQNLAGVNAMWKALAGWLERRIERGEPYRRLNLPEIPASWSHIGYTLRLAFPGRADLRLMRRVLTSHPQTVSSPRLLIDYFQAAIQKENASHALRQAFSEFRDAWFSGRRALADMPFWRLRQRAMALSSDIDTRKAIIDMCVDFDGSRCYFSAAGENDESVFAPSLSDALLSASAENSDNLGSAAQSGLLFFHQVGHGRWRAIAAPDAFSPKFHIALSCQYAARASQYFDDAVTENDWILTPRPQSRHAAMEIFRALKASTALDEHVSRPQFSDGIRVPGGWLGLPAFLPTIKSDTQNYRIYAPQGNGAEISVRKADGRLTSSIPLSGEFIIEPEPEIGEKTAPWRRRARFFERAVPRPAQEESARYRLERLTDWSASPLSTPIFRADIPLKAESGDAPVDHLLEAIYASGASGWEEIELVSLLERAADGVNVWHLIRCLHDAGLIEPRLRQGWKGRVWTTVSPSLLHISAGENSLVVVEGAVCASLIDDFQTAVLALGGKYFRRRGVSVWSPPVFGARIDDPVALSRIMGWQLVDASSTPDMTPLALTSTCRTDELHAQAAIWDWRSGRFSAHAASDNAAALLTRHVHPGGRDHDVYKVVSRRKTAFFLSRTAAIIAACVSARRPMFRRVGGRRLICLFDDCGLPDALAAGLRRGALRNGGPTEDGYVYPLDDVAFRWLNRLLPGCFALLPSGDGDNANRLVSAARHSGGKARLIWRNGRLTL
>NZ_CP006693.1|WP_000280762.1|971087_971858_+|N-acetylmuramoyl-L-alanine-amidase
MYLIDYNSYRSVKGFNRRVRFLVMHYTSIDFKASIAALTGASVSAHYLVPDPSEKTYIAAGFKDMRIFNLVDENERAWHAGVSSWAGRSNLNDTSIGIEMVNLASDNNGVFVFPPYNPVLIDAIKELAANILQRYPDITPVNVVGHSDIAPGRKSDPGAAFPWKELYDAGIGAWYEESTMQHYLKQFSKSVPSKTEIVAKLKAYGYGISDAGTEIGYKNLIRTFQLHFRQKNYDGVADAETAAILYALVDKYFPAK
>NZ_CP006693.1|WP_071841288.1|971877_972210_-|phage-tail-protein
MPENVASVSPDGEYQKWDGKVWVKDEAAETAAQLRQAAETKNRLLQIASEKIAQLQDAVDLIIAIDDEKAQLDEWKKYRVSVNRMDASNPDWISQPDKIVPLISNQWQIN
>NZ_CP006693.1|WP_000598912.1|973681_974437_+|DgsA-anti-repressor-MtfA
MIKWPWKAQEITQNADWLWDDALAIPLLVNLTAQEQARLIALAERFLQQKRLVALQGVELDSLKSARIALIFCLPILELGLEWLDGFHEVLIYPAPFVVDDEWEDDIGLVHSQRVVQSGQSWQQGPIILNWLDIQDSFDASGFNLIIHEVAHKLDMRNGDRASGIPFIPLRDVAGWEHDLHAAMNNIQDEIDLVGENAASIDAYAATDPAECFAVLSEYFFSAPELFAPRFPALWQRFCQFYRQDPSQRLR
>NZ_CP006693.1|WP_077916553.1|974819_975008_+|DUF4102-domain-containing-protein
MALTDTAIRKIKPTDKSFKLTNSSGLYLLIKSNGLKLWYIKYRILGKEKKQAFWSLTGCFPV
>NZ_CP006693.1|WP_128971899.1|975501_976664_+|IS3-family-transposase
MTKPASTTKKIRKQHAPEFRQEALKLAERIGVAAVARELSLYESQLYNWRSKQQNQFSSSEREQEMSAEIARLKRQLAERDEELTILQKGRDILREAPEMKYVFIEKHQAEFSIKAMCRVLQVARSGWYIWHQRRHQINRRQHFRLVCDNVVREAFSDAKQRYGAPRLTDELRAQGRVYNIKTVAASLRRQGLRAKASRRFSPVSYREHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVVIDLWSRSVTGWSMSSRMTAQLACDALQMALWRRKHPENVIVHTDRGGQYCSADYQSLLKRHNPRGSMSARGCCYDNACAESFFHTLKVECIHGEDFASREIMRTVVFNYIECDYNRWRRHSACGGLSPEQFENQNLA
>NZ_CP006693.1|WP_000208505.1|978581_978794_+|cold-shock-protein
MTTKITGLVKWFNPEKGFGFITPKDGSKDVFVHFSAIQSNDFRTLNENQEVEFSVEQGPKGPSAVDVVAL
>NZ_CP006693.1|WP_071841344.1|978804_978993_+|cold-shock-protein
MTNKIHFRCPCCHGSQYRTSTFDVTEQNPFGAKCIFCKSTMITFDNVALYMRSGQIPPDFRK
>NZ_CP006693.1|WP_072159169.1|980910_981222_+|hypothetical-protein
MSTREEKATRSMGGKLALWVFYTFCVYFIWVMARYVWLISVIQVEPVLGPNGAPVSVTEKWLNALSLGVVWLILGSIAWYTRPRKGLTFPSDTKPEMRNQAGM
>NZ_CP006693.1|WP_038395693.1|982067_983498_+|DNA-cytosine-methyltransferase
MQENLSVTHARNFIADGAGSEVQAMLSQLLEIYDVKTLVAHLNGLGEHHWSPAILKRVMMNTAWHRLSDNEFASLKTLLPTPPAHHPHYAFRFIDLFAGIGGIRRGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLEHRFNEDIRDITLSHREGVGDDEAAEHIRQYIPQHDVLLAGFPCQPFSLAGVSKKNALGRAHGFACETQGTLFFDVVRIIDARRPALFVLENVKNLKSHDQGNTFRIIMQTLDELGYDVADAADNGPDDPKIIDGQHFLPQHRERIVLVGFRRDLNLKTDFTLRNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKYLYCYAKKHQARGNGFGYGMVYPDNPESVARTLSARYYKDGAEILIDRGWDMAKGEVNFDDAGNQQHRPRRLTPRECARLMGFETPQTYQFRIPVSDTQAYRQFGNSVVVPVFAAVAKLLETKIHQAVALRQREAVDGGRSR
>NZ_CP006693.1|WP_000786010.1|983478_983949_+|very-short-patch-repair-endonuclease
MADVHDKATRSKNMRAIATRDTAIEKRLASLLTSQGITFHTQDATLPGKPDFVVNDYDCVIFTHGCFWHHHHCYLFNVPATRTAFWLEKIGKNVERDERDIQRLQALGWRVLIVWECALRGRAKLSDAALAERLEEWICGGGASAQIDTQGIHLLS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP006693_1	1.9\|967972\|31\|NZ_CP006693\|CRT	967972-968002	31	NZ_CP006693.1	1094790-1094820	1	0.968

1. spacer 1.9|967972|31|NZ_CP006693|CRT matches to position: 1094790-1094820, mismatch: 1, identity: 0.968

gcagctggttaccagcgaaaatcagctcctg	CRISPR spacer
gcagctggttaccagcgacaatcagctcctg	Protospacer
****************** ************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP006693_1	1.1\|967492\|31\|NZ_CP006693\|CRT	967492-967522	31	MT773557	Myoviridae sp. isolate BML_S_1 genomic sequence	14817-14847	6	0.806

1. spacer 1.1|967492|31|NZ_CP006693|CRT matches to MT773557 (Myoviridae sp. isolate BML_S_1 genomic sequence) position: , mismatch: 6, identity: 0.806

gcagctggttatcaaacaccaccagctcctc	CRISPR spacer
gttggtggttatcaaacaaaaccagctcctg	Protospacer
*. * *************  **********

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

800406 : 812229

Enterobacteria_phage(33.33%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038395414.1\|800406_801810_+	colanic acid biosynthesis protein WcaM	A0A291LBB9	Klebsiella_phage	8.9e-21	31.9
WP_038395416.1\|801986_802880_+	GalU regulator GalF	A0A127AW70	Bacillus_phage	2.4e-43	41.0
WP_038395421.1\|803253_804339_+	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	9.1e-98	51.2
WP_038395424.1\|804338_805238_+	dTDP-4-dehydrorhamnose reductase	A0A140G5S3	Enterobacteria_phage	1.0e-30	36.7
WP_038395426.1\|805291_806170_+	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.9e-106	63.1
WP_038395428.1\|806171_806717_+	dTDP-4-dehydrorhamnose 3,5-epimerase	I7HJC4	Enterobacteria_phage	1.3e-49	58.1
WP_038395430.1\|806747_808022_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB	A7IWZ0	Paramecium_bursaria_Chlorella_virus	2.6e-27	27.2
WP_038395432.1\|808045_809074_+	Vi polysaccharide biosynthesis UDP-N-acetylglucosaminuronic acid C-4 epimerase TviC	A0A2K9L4U8	Tupanvirus	1.0e-74	46.4
WP_071841282.1\|809188_810394_+	oligosaccharide flippase family protein	NA	NA	NA	NA
WP_038395436.1\|810381_812229_+	asparagine synthase (glutamine-hydrolyzing)	A0A1V0SGM7	Hokovirus	2.1e-33	27.5

DBSCAN-SWA_2

832401 : 876394

Salmonella_phage(68.85%)

lysis,integrase,tail,head,capsid,holin

attL 829906:829922|attR 864020:864036

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
829906:829922	attL	NA	NA	NA	NA
WP_038395458.1\|832401_833583_+\|integrase	site-specific integrase	A0A0M4QX09	Salmonella_phage	6.0e-212	90.3
WP_038397745.1\|833931_834171_-	DUF4060 family protein	S4TR31	Salmonella_phage	1.1e-35	93.7
WP_038395460.1\|834176_836429_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1B0V7P0	Salmonella_phage	2.9e-199	48.5
WP_038395462.1\|836425_837049_-	exonuclease	A0A0S2SY31	Pseudomonas_phage	1.7e-56	56.9
WP_052043286.1\|837045_837789_-	phage recombination protein Bet	A0A0M4RD39	Salmonella_phage	2.8e-66	68.8
WP_038395464.1\|837794_838091_-	host-nuclease inhibitor protein Gam	A0A0M5M5Z9	Salmonella_phage	7.5e-47	96.9
WP_038397747.1\|838176_838377_-	cell division protein FtsZ	G8C7T2	Escherichia_phage	1.4e-12	48.4
WP_001230760.1\|838681_839083_-	helix-turn-helix domain-containing protein	A0A0M4REM4	Salmonella_phage	6.8e-67	99.2
WP_024136368.1\|839110_839494_-	helix-turn-helix domain-containing protein	A0A0M4R5D1	Salmonella_phage	6.3e-62	99.2
WP_001013670.1\|839597_839834_+	hypothetical protein	A0A0M4QX15	Salmonella_phage	2.3e-38	100.0
WP_062952438.1\|839799_840177_+	transcriptional regulator	S4TTD7	Salmonella_phage	1.2e-36	63.3
WP_038395467.1\|840267_841179_+	hypothetical protein	H6WRX7	Salmonella_phage	3.1e-123	71.4
WP_038395469.1\|841181_841931_+	ATP-binding protein	S4TNF5	Salmonella_phage	8.1e-138	99.2
WP_023891735.1\|841941_842289_+	DUF977 family protein	H6WRX9	Salmonella_phage	2.5e-57	97.4
WP_038395471.1\|842285_842687_+	ParB/RepB/Spo0J family partition protein	S4TTI6	Salmonella_phage	2.4e-72	97.7
WP_052043287.1\|842683_843364_+	ead/Ea22-like family protein	A0A075B8K3	Enterobacteria_phage	4.0e-67	63.6
WP_038395473.1\|843365_843836_+	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	3.6e-67	78.1
WP_038395475.1\|843839_844235_+	hypothetical protein	A0A088CE95	Shigella_phage	3.2e-24	48.2
WP_038395477.1\|844328_844595_+	hypothetical protein	S4TNF2	Salmonella_phage	2.2e-45	96.6
WP_001217669.1\|844774_845008_+	DinI family protein	H6WRY5	Salmonella_phage	5.6e-37	100.0
WP_071841283.1\|845124_845373_+	hypothetical protein	A0A0U2C0C8	Salmonella_phage	1.0e-41	97.6
WP_000929788.1\|845407_846010_+	DUF1367 family protein	A0A0M4QX23	Salmonella_phage	7.5e-110	99.0
WP_038395480.1\|846218_846830_+	protein ninG	A0A0M4RU10	Salmonella_phage	6.1e-91	99.0
WP_023224313.1\|846826_846967_+	YlcG family protein	H6WRZ0	Salmonella_phage	8.5e-09	84.2
WP_038395483.1\|846963_847653_+	antiterminator	I6PDF8	Cronobacter_phage	1.0e-57	49.4
WP_164967345.1\|847854_848196_+\|holin	phage holin, lambda family	Q8SBE1	Shigella_phage	1.9e-46	80.7
WP_038395487.1\|848185_848635_+	lysozyme	A0A0M4R365	Salmonella_phage	1.3e-74	91.9
WP_038395488.1\|848652_849105_+\|lysis	lysis protein	Q56118	Enterobacteria_phage	5.3e-60	82.0
WP_038395490.1\|849304_849568_+	hypothetical protein	NA	NA	NA	NA
WP_001118128.1\|849637_850267_+	hypothetical protein	A0A0M3ULJ9	Salmonella_phage	5.4e-111	100.0
WP_038395492.1\|850269_851892_+	hypothetical protein	A0A0M5M1R6	Salmonella_phage	0.0e+00	98.9
WP_038395494.1\|851891_853358_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.2e-281	99.6
WP_139770896.1\|853245_853983_+\|capsid	minor capsid protein	A0A0M4REK0	Salmonella_phage	1.0e-108	95.5
WP_038395498.1\|853997_855230_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	1.8e-195	87.1
WP_000128058.1\|855234_855732_+	hypothetical protein	A0A0M4QWZ6	Salmonella_phage	3.0e-88	100.0
WP_038395499.1\|855743_856685_+	DUF2184 domain-containing protein	A0A0M3ULD3	Salmonella_phage	3.5e-178	98.7
WP_038395501.1\|856726_857116_+	bacteriophage protein	A0A0M4RTX5	Salmonella_phage	7.4e-34	63.6
WP_038395503.1\|857081_857489_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	4.8e-68	92.6
WP_038395506.1\|857485_858034_+	hypothetical protein	A0A0M4S631	Salmonella_phage	3.1e-78	84.0
WP_038395509.1\|858020_858410_+\|head,tail	head-tail adaptor	A0A0M3ULK0	Salmonella_phage	1.7e-67	97.7
WP_038395512.1\|858384_858948_+	hypothetical protein	A0A0M4R331	Salmonella_phage	1.5e-80	75.3
WP_038395514.1\|858951_860097_+	DUF3383 domain-containing protein	A0A2H4J8G4	uncultured_Caudovirales_phage	1.2e-164	76.4
WP_023200779.1\|860108_860549_+	DUF3277 family protein	A0A2H4J619	uncultured_Caudovirales_phage	2.5e-54	73.3
WP_000389050.1\|860552_861005_+	hypothetical protein	A0A0M4S6U8	Salmonella_phage	4.4e-62	79.3
WP_038395517.1\|861182_863213_+	lytic transglycosylase catalytic	A0A0M4REK7	Salmonella_phage	3.3e-165	51.2
WP_038395520.1\|863212_863863_+	hypothetical protein	A0A0M3ULD5	Salmonella_phage	1.0e-56	61.1
WP_000388505.1\|863866_864169_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	2.0e-26	57.0
864020:864036	attR	NA	NA	NA	NA
WP_038395523.1\|864171_865203_+	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	6.0e-99	52.0
WP_038395526.1\|865199_865535_+	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	4.0e-20	51.1
WP_052043288.1\|865541_865859_-	Arc family DNA-binding protein	Q76H48	Enterobacteria_phage	2.8e-07	48.4
WP_038395528.1\|865977_866139_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_038395530.1\|866211_866772_+	hypothetical protein	B6SCX2	Bacteriophage	9.3e-30	59.6
WP_038395532.1\|866845_867592_+	phage-like protein	A0A0P0ZDC0	Stx2-converting_phage	4.7e-69	59.6
WP_038395534.1\|867655_868411_+	translation initiation factor IF-2	A0A0M5M1K7	Salmonella_phage	1.3e-103	77.7
WP_038395537.1\|868650_869004_+	bacteriophage protein	A0A0M4R339	Salmonella_phage	5.4e-60	97.4
WP_038395538.1\|869004_870204_+	bacteriophage protein	A0A0M4RD32	Salmonella_phage	1.2e-215	98.0
WP_038395540.1\|870200_870881_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	2.6e-127	97.8
WP_038395542.1\|870880_872413_+	hypothetical protein	S4TP62	Salmonella_phage	1.4e-128	65.9
WP_038395544.1\|872427_872946_+\|tail	tail protein	A0A0U2QV64	Escherichia_phage	1.6e-47	53.8
WP_071786695.1\|873194_873380_+	hypothetical protein	NA	NA	NA	NA
WP_000370530.1\|873442_874051_+	DUF4376 domain-containing protein	S5MBX6	Escherichia_phage	1.1e-31	44.7
WP_000033280.1\|874160_874553_+	DUF1353 domain-containing protein	I1TQ41	Pseudomonas_phage	8.5e-14	37.4
WP_127913510.1\|874750_874996_-	hypothetical protein	NA	NA	NA	NA
WP_071841343.1\|875178_875340_+	helix-turn-helix domain-containing protein	S4TTF2	Salmonella_phage	8.3e-08	84.4
WP_038395547.1\|875421_876069_-	hypothetical protein	NA	NA	NA	NA
WP_038395549.1\|876127_876394_-	hypothetical protein	A0A0M3ULK3	Salmonella_phage	6.1e-40	93.2

DBSCAN-SWA_3

2572998 : 2636464

Enterobacteria_phage(64.71%)

integrase,plate,transposase

attL 2578221:2578236|attR 2588845:2588860

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000708640.1\|2572998_2574348_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_038396840.1\|2574360_2575908_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000785632.1\|2575943_2576441_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_128971915.1\|2576945_2578045_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	2.5e-47	42.2
2578221:2578236	attL	NA	NA	NA	NA
WP_038396842.1\|2578516_2580814_-	toprim domain-containing protein	Q7M2A8	Enterobacteria_phage	0.0e+00	82.6
WP_038396843.1\|2580828_2581149_-	DUF5375 domain-containing protein	NA	NA	NA	NA
WP_038397832.1\|2581145_2581373_-	hypothetical protein	NA	NA	NA	NA
WP_038396844.1\|2581478_2581928_-	hypothetical protein	Q7M298	Enterobacteria_phage	2.0e-46	69.0
WP_038396845.1\|2581920_2582220_-	hypothetical protein	Q7M2A0	Enterobacteria_phage	5.3e-32	68.7
WP_038396846.1\|2582212_2582767_-	ash family protein	Q7M2A7	Enterobacteria_phage	6.2e-34	67.8
WP_038396847.1\|2582763_2583030_-	AlpA family transcriptional regulator	Q7M299	Enterobacteria_phage	4.0e-23	63.6
WP_038396848.1\|2583578_2584316_+	hypothetical protein	Q7M2A2	Enterobacteria_phage	3.4e-80	64.9
WP_000984211.1\|2584312_2584558_+	transcriptional regulator	Q7M294	Enterobacteria_phage	6.3e-31	76.5
WP_000210076.1\|2584574_2585141_+	phage polarity suppression protein	Q7M2A1	Enterobacteria_phage	1.3e-55	62.7
WP_038396849.1\|2585463_2586573_-	hypothetical protein	NA	NA	NA	NA
WP_038396850.1\|2586577_2587495_-	hypothetical protein	NA	NA	NA	NA
WP_038396851.1\|2587499_2588675_-\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	2.8e-145	62.2
WP_038396852.1\|2589030_2590281_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	1.2e-96	46.2
2588845:2588860	attR	NA	NA	NA	NA
WP_038396853.1\|2590292_2591396_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	6.9e-61	40.1
WP_038396854.1\|2591678_2592731_+	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	3.9e-114	58.7
WP_038396855.1\|2592782_2593184_-	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_038396856.1\|2593241_2594486_-	esterase FrsA	NA	NA	NA	NA
WP_001292018.1\|2594574_2595033_-	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_038396857.1\|2595278_2596736_+	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_038396858.1\|2596995_2598051_-	DNA polymerase IV	NA	NA	NA	NA
WP_001225661.1\|2598302_2599043_+	murein L,D-transpeptidase	NA	NA	NA	NA
WP_038396859.1\|2599013_2599781_-	class II glutamine amidotransferase	NA	NA	NA	NA
WP_000284051.1\|2599856_2600435_-	D-sedoheptulose 7-phosphate isomerase	A0A067XQR2	Caulobacter_phage	1.3e-13	30.8
WP_038396860.1\|2600674_2603119_+	acyl-CoA dehydrogenase FadE	NA	NA	NA	NA
WP_038396861.1\|2603227_2603995_+	amidohydrolase	NA	NA	NA	NA
WP_000788196.1\|2604156_2604564_+	hypothetical protein	NA	NA	NA	NA
WP_038396864.1\|2605619_2606339_+	adhesin/invasin protein PagN	NA	NA	NA	NA
WP_038396865.1\|2607090_2608473_-	membrane protein	NA	NA	NA	NA
WP_038396866.1\|2608519_2609764_-	chromosome partitioning protein ParA	Q9MC01	Enterobacteria_phage	5.8e-80	63.0
WP_071841313.1\|2609842_2610241_-	hypothetical protein	NA	NA	NA	NA
WP_038396867.1\|2610363_2610834_-	hypothetical protein	NA	NA	NA	NA
WP_000004546.1\|2610848_2611301_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_038396868.1\|2611293_2611836_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_000553779.1\|2611810_2612914_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_001114733.1\|2614653_2615184_-	DUF805 domain-containing protein	NA	NA	NA	NA
WP_038396869.1\|2615246_2615978_-	hypothetical protein	NA	NA	NA	NA
WP_038396870.1\|2616008_2617604_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_038396871.1\|2617603_2621011_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_038396872.1\|2620997_2622155_-	hypothetical protein	NA	NA	NA	NA
WP_000033409.1\|2622158_2622425_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_038396873.1\|2622454_2623309_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	2.4e-13	29.5
WP_038396874.1\|2623314_2625540_-	hypothetical protein	NA	NA	NA	NA
WP_038396875.1\|2625584_2628098_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_128971917.1\|2628175_2628403_-	hypothetical protein	NA	NA	NA	NA
WP_065304584.1\|2628402_2628744_-	hypothetical protein	NA	NA	NA	NA
WP_000152197.1\|2628860_2629430_-	hypothetical protein	NA	NA	NA	NA
WP_038397833.1\|2629444_2632093_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.9e-97	33.0
WP_038396876.1\|2632255_2632747_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_038397834.1\|2632751_2634380_-	OmpA family protein	NA	NA	NA	NA
WP_001097692.1\|2634479_2635130_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_000708633.1\|2635126_2636464_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_4

2669964 : 2742157

Escherichia_phage(25.0%)

plate,tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038396896.1\|2669964_2670390_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_038396897.1\|2670395_2672225_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_038396898.1\|2672188_2673247_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_038396899.1\|2673281_2674553_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_038396900.1\|2674549_2675080_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_038396901.1\|2675082_2676423_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_038396902.1\|2676426_2677185_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_038396903.1\|2677199_2679908_+	type VI secretion system ATPase TssH	A0A1C3S747	Escherichia_phage	3.1e-86	30.7
WP_052043315.1\|2679907_2680594_+	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_038396904.1\|2680609_2682016_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_128971929.1\|2682096_2685582_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_038396906.1\|2685632_2686973_+	membrane protein	NA	NA	NA	NA
WP_038396907.1\|2686997_2687477_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_052043316.1\|2687614_2687827_+	hypothetical protein	NA	NA	NA	NA
WP_071841316.1\|2687869_2688241_+	DUF4225 domain-containing protein	NA	NA	NA	NA
WP_038396909.1\|2689427_2689649_+	hypothetical protein	O64358	Escherichia_phage	1.2e-09	42.5
WP_052043318.1\|2689682_2690141_+	hypothetical protein	NA	NA	NA	NA
WP_052043319.1\|2690137_2690392_+	DUF3085 domain-containing protein	NA	NA	NA	NA
WP_038396911.1\|2690777_2691209_+	DUF3577 domain-containing protein	NA	NA	NA	NA
WP_038396912.1\|2697705_2698272_-	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000593985.1\|2698461_2699493_+	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	4.2e-36	40.6
WP_038396913.1\|2699485_2700139_+	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000874212.1\|2700177_2700993_+	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001202365.1\|2701111_2701516_+	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_038396914.1\|2701512_2702220_+\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001260671.1\|2702330_2704049_+\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_038396915.1\|2704123_2704825_-	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_000560520.1\|2704856_2705279_-\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_001185311.1\|2705275_2705821_-	YaeQ family protein	NA	NA	NA	NA
WP_012210508.1\|2706000_2706219_+	YaeP family protein	NA	NA	NA	NA
WP_000062327.1\|2706205_2706466_+	Rho-binding antiterminator	NA	NA	NA	NA
WP_038396916.1\|2706508_2707807_-\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_038396917.1\|2707869_2708259_-	VOC family protein	NA	NA	NA	NA
WP_038396918.1\|2708314_2710456_-	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_038396919.1\|2710531_2712295_-	chitinase	NA	NA	NA	NA
WP_000055758.1\|2712614_2713574_-	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_038396920.1\|2713586_2717069_-	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	1.4e-208	36.8
WP_000569408.1\|2717092_2717689_-	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	5.1e-26	39.8
WP_000741211.1\|2717685_2718834_-	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_000565955.1\|2718833_2719622_-	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_000210741.1\|2719625_2720081_-	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_038396921.1\|2720186_2721212_-	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000758960.1\|2721215_2721701_-	molecular chaperone Skp	NA	NA	NA	NA
WP_001240917.1\|2721823_2724256_-	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_038396922.1\|2724287_2725640_-\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_000922420.1\|2725651_2726509_-	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_024132000.1\|2726521_2727280_-	(2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase	R9W0U9	Flavobacterium_phage	3.2e-25	42.2
WP_038396923.1\|2727592_2728789_-	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_000622423.1\|2728929_2729487_-	ribosome recycling factor	NA	NA	NA	NA
WP_000224567.1\|2729895_2730621_-	UMP kinase	NA	NA	NA	NA
WP_000808101.1\|2730766_2731618_-	elongation factor Ts	NA	NA	NA	NA
WP_000246886.1\|2731877_2732603_-	30S ribosomal protein S2	NA	NA	NA	NA
WP_001018207.1\|2732926_2733721_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_038396924.1\|2733828_2736501_+	bifunctional uridylyltransferase/uridylyl-removing protein GlnD	NA	NA	NA	NA
WP_001186673.1\|2736530_2737355_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_038396925.1\|2737408_2738710_-	MHS family MFS transporter	Q6JIH2	Burkholderia_virus	1.0e-34	31.1
WP_000272195.1\|2738955_2739342_+	DUF3461 family protein	NA	NA	NA	NA
WP_000929413.1\|2739420_2740578_-	DNA-binding transcriptional regulator CdaR	NA	NA	NA	NA
WP_024132001.1\|2740729_2742157_-\|protease	serine endoprotease DegP	A0A1B1IT49	uncultured_Mediterranean_phage	5.5e-26	29.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage