CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009585	Burkholderia pseudomallei strain PHLS 112 chromosome I, complete sequence	1 crisprs	WYL,cas3,DEDDh,csa3,RT,DinG	0	0	7	0
NZ_CP009586	Burkholderia pseudomallei strain PHLS 112 chromosome II, complete sequence	1 crisprs	csa3,DinG,cas3,PD-DExK	0	0	5	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009585_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009585_1

473976-474056

Orphan

Consensus_repeat	Method
ACGGAATGGGCCCCGGCATGATGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009585_1

>merge|NZ_CP009585|1|473976-474056|CRISPRCasFinder
ACGGAATGGGCCCCGGCATGATGCGCGGCGGCTACGGGCGCGGAATGATGGGCGGCTACGGAATGGGGCCCGGCATGATGC

>NZ_CP009585|1|1|473976-474056|CRISPRCasFinder
ACGGAATGGGCCCCGGCATGATGC	GCGGCGGCTACGGGCGCGGAATGATGGGCGGCT
ACGGAATGGGGCCCGGCATGATGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009585.1\|WP_004525842.1\|469507_470383_-\|N-carbamoylputrescine-amidase	unknown	unknown	gnl\|CDD\|274553
NZ_CP009585.1\|WP_009969935.1\|464530_465544_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378890
NZ_CP009585.1\|WP_009969926.1\|472771_473740_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176114
NZ_CP009585.1\|WP_004524603.1\|483671_484232_-\|spermidine-N1-acetyltransferase	unknown	unknown	gnl\|CDD\|237916
NZ_CP009585.1\|WP_004523110.1\|470393_471506_-\|histone-deacetylase	unknown	unknown	gnl\|CDD\|212521
NZ_CP009585.1\|WP_038724261.1\|462347_463439_-\|phage-portal-protein	unknown	unknown	gnl\|CDD\|222860
NZ_CP009585.1\|WP_004535409.1\|477307_478921_-\|glutamate--cysteine-ligase	unknown	unknown	gnl\|CDD\|235001
NZ_CP009585.1\|WP_004523120.1\|480017_481112_-\|bifunctional-DNA-binding-transcriptional-regulator/O6-methylguanine-DNA-methyltransferase-Ada	unknown	unknown	gnl\|CDD\|185333
NZ_CP009585.1\|WP_009969936.1\|464089_464524_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009585.1\|WP_009969933.1\|466579_467461_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224098
NZ_CP009585.1\|WP_004524604.1\|482838_483186_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009585.1\|WP_004553741.1\|479079_480021_-\|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl\|CDD\|223200
NZ_CP009585.1\|WP_004197761.1\|481513_481930_+\|lactoylglutathione-lyase	unknown	unknown	gnl\|CDD\|319916
NZ_CP009585.1\|WP_009972644.1\|465728_466583_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224097
NZ_CP009585.1\|WP_004543103.1\|475840_477289_+\|RNA-polymerase-sigma-factor-RpoD/SigA	unknown	unknown	gnl\|CDD\|274108
NZ_CP009585.1\|WP_004524601.1\|484908_485064_-\|lipoprotein	unknown	unknown	gnl\|CDD\|215083
NZ_CP009585.1\|WP_009969927.1\|471534_472629_-\|polyamine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270377
NZ_CP009585.1\|WP_009969932.1\|467457_468483_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270382
NZ_CP009585.1\|WP_004530511.1\|482069_482624_-\|YaeQ-family-protein	unknown	unknown	gnl\|CDD\|377782
NZ_CP009585.1\|WP_009917993.1\|475029_475578_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009585.1\|WP_004525842.1\|469507_470383_-\|N-carbamoylputrescine-amidase	gnl\|CDD\|274553	TIGR03381, putative_carbon-nitrogen_hydrolase, N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one. [Central intermediary metabolism, Polyamine biosynthesis].	0
NZ_CP009585.1\|WP_009969935.1\|464530_465544_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378890	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term. AraC is a bacterial transcriptional regulatory protein with a DNA-binding domain at the C-terminus, HTH_AraC, pfam00165, and this dimerization domain which harbours the arabinose-binding pocket at the N-terminus. AraC positively and negatively regulates expression of the proteins required for the uptake and catabolism of the sugar L-arabinose 1,2,3].	2.06814e-39
NZ_CP009585.1\|WP_009969926.1\|472771_473740_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176114	cd08422, PBP2_CrgA_like, The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain. This CD includes the substrate binding domain of LysR-type transcriptional regulator (LTTR) CrgA and its related homologs. The LTTRs are acting as both auto-repressors and activators of target promoters, controlling operons involved in a wide variety of cellular processes such as amino acid biosynthesis, CO2 fixation, antibiotic resistance, degradation of aromatic compounds, nodule formation of nitrogen-fixing bacteria, and synthesis of virulence factors, to name a few. In contrast to the tetrameric form of other LTTRs, CrgA from Neisseria meningitides assembles into an octameric ring, which can bind up to four 63-bp DNA oligonucleotides. Phylogenetic cluster analysis further showed that the CrgA-like regulators form a subclass of the LTTRs that function as octamers. The CrgA is an auto-repressor of its own gene and activates the expression of the mdaB gene which coding for an NADPH-quinone reductase and that its action is increased by MBL (alpha-methylene-gamma-butyrolactone), an inducer of NADPH-quinone oxidoreductase. The structural topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	7.2189e-71
NZ_CP009585.1\|WP_004523110.1\|470393_471506_-\|histone-deacetylase	gnl\|CDD\|212521	cd09996, HDAC_classII_1, Histone deacetylases and histone-like deacetylases, classII. This subfamily includes bacterial as well as eukaryotic Class II histone deacetylase (HDAC) and related proteins. Deacetylases of class II are Zn-dependent enzymes that catalyze hydrolysis of N(6)-acetyl-lysine residues of histones (EC 3.5.1.98) and possibly other proteins to yield deacetylated histones/other proteins. Included in this family is a bacterial HDAC-like amidohydrolase (Bordetella/Alcaligenes species FB18817, denoted as FB188 HDAH) shown to be most similar in sequence and function to class II HDAC6 domain 3 or b (HDAC6b). FB188 HDAH is able to remove the acetyl moiety from acetylated histones, and can be inhibited by common HDAC inhibitors such as SAHA (suberoylanilide hydroxamic acid) as well as class II-specific but not class I specific inhibitors.	1.0559e-172
NZ_CP009585.1\|WP_038724261.1\|462347_463439_-\|phage-portal-protein	gnl\|CDD\|222860	PHA02536, Q, portal vertex protein; Provisional.	0
NZ_CP009585.1\|WP_004535409.1\|477307_478921_-\|glutamate--cysteine-ligase	gnl\|CDD\|235001	PRK02107, PRK02107, glutamate--cysteine ligase; Provisional.	0
NZ_CP009585.1\|WP_004523120.1\|480017_481112_-\|bifunctional-DNA-binding-transcriptional-regulator/O6-methylguanine-DNA-methyltransferase-Ada	gnl\|CDD\|185333	PRK15435, PRK15435, bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada.	8.19665e-122
NZ_CP009585.1\|WP_009969936.1\|464089_464524_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.4965e-11
NZ_CP009585.1\|WP_009969933.1\|466579_467461_+\|ABC-transporter-permease	gnl\|CDD\|224098	COG1177, PotC, ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism].	2.10087e-82
NZ_CP009585.1\|WP_004524603.1\|483671_484232_-\|spermidine-N1-acetyltransferase	gnl\|CDD\|237916	PRK15130, PRK15130, spermidine N1-acetyltransferase; Provisional.	7.47948e-86
NZ_CP009585.1\|WP_004553741.1\|479079_480021_-\|DNA-3-methyladenine-glycosylase-2-family-protein	gnl\|CDD\|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	9.45664e-54
NZ_CP009585.1\|WP_004197761.1\|481513_481930_+\|lactoylglutathione-lyase	gnl\|CDD\|319916	cd07253, GLOD5, Human glyoxalase domain-containing protein 5 and similar proteins. Uncharacterized subfamily of VOC family contains human glyoxalase domain-containing protein 5 and similar proteins. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.46868e-30
NZ_CP009585.1\|WP_009972644.1\|465728_466583_+\|ABC-transporter-permease	gnl\|CDD\|224097	COG1176, PotB, ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism].	8.28809e-81
NZ_CP009585.1\|WP_004543103.1\|475840_477289_+\|RNA-polymerase-sigma-factor-RpoD/SigA	gnl\|CDD\|274108	TIGR02393, RNA_polymerase_sigma_factor_RpoD, RNA polymerase sigma factor RpoD, C-terminal domain. This model represents the well-conserved C-terminal region of the major, essential sigma factor of most bacteria. Members of this clade show considerable variability in domain architecture and molecular weight, as well as in nomenclature: RpoD in E. coli and other Proteobacteria, SigA in Bacillus subtilis and many other Gram-positive bacteria, HrdB in Streptomyces, MysA in Mycobacterium smegmatis, etc. [Transcription, Transcription factors].	2.71742e-88
NZ_CP009585.1\|WP_004524601.1\|484908_485064_-\|lipoprotein	gnl\|CDD\|215083	PLN00162, PLN00162, transport protein sec23; Provisional.	0.00226922
NZ_CP009585.1\|WP_009969927.1\|471534_472629_-\|polyamine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270377	cd13659, PBP2_PotF, The periplasmic substrate-binding component of an ABC putrescine transport system and related proteins; contains the type 2 periplasmic-binding fold. This group represents the periplasmic substrate-binding domain that serves as the primary polyamine receptor of ABC-type putrescine-preferential transporter from gram-negative bacteria. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.02771e-148
NZ_CP009585.1\|WP_009969932.1\|467457_468483_+\|extracellular-solute-binding-protein	gnl\|CDD\|270382	cd13664, PBP2_PotD_PotF_like_3, TThe periplasmic substrate-binding component of an uncharacterized active transport system closely related to spermidine and putrescine transporters; contains the type 2 periplasmic binding fold. This family represents the periplasmic substrate-binding domain that functions as the primary high-affinity receptors of ABC-type polyamine transport systems. Polyamine transport plays an essential role in the regulation of intracellular polyamine levels which are known to be elevated in rapidly proliferating cells and tumors. Natural polyamines are putrescine, spermindine, and spermine. They are polycations that play multiple roles in cell growth, survival and proliferation, and plant stress and disease resistance. They can interact with negatively charged molecules, such as nucleic acids, to modulate their functions. Members of this family belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	2.09944e-170
NZ_CP009585.1\|WP_004530511.1\|482069_482624_-\|YaeQ-family-protein	gnl\|CDD\|377782	pfam07152, YaeQ, YaeQ protein. This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialized transcription elongation protein. YaeQ is known to compensate for loss of RfaH function.	1.52049e-103

>NZ_CP009585.1|WP_009969926.1|472771_473740_+|LysR-family-transcriptional-regulator
MRRIDLLSALETFVCAVEEGSLSQAARRLAKTPSAVTKAIAGLEATLGVQLLERTTRRLALTESGRLYLATATDVLRRLADGARQLSERDDEPRGLLRVTAAHSFGHAILAPLCAPFAQAFPRVRIELSLSDHYVDIVGEGFDLALRMGNYDLPSQIVKPIGSNRGLLCASPGYLARRGRPTAPADLARHDCVIYRHPTLANTWTFERGGVRARLEPKGPLVTDDYGLALAAALDGAGVLPCPQWSVVDALEAGRLVPLLVDWRFESASFGEDRICAAYPSSRRGSTKIRRLVERVQARLADSEARVARVLGDALCADLARR
>NZ_CP009585.1|WP_009969927.1|471534_472629_-|polyamine-ABC-transporter-substrate-binding-protein
MKRIAWLAAVLASLACAAARAADGNVLNIYNWAEYFAPDTIAGFEKETGIKVRLDVYDSNEALQTKLTTGNSGYDLVFPSNDFLARQIQAGLYRKLDKSRLPNLTNLDPAIVARAAEVDPGNQYSVPYMQGTFGLGLNIAKVKQALGGPLPANTLELIFNPAYAAKLERCGIAFNDAGSEVFPLALRYIGRDPNTTDPRDYEAALDMMKKIRPTIRQFIATPVMNDLATGDVCVVTGYSGAVLVAARRAAEAKNGQQIVYSLPSAGAPFWFDSMAIPKGAAHADHALRFIDYILRPDVVAKISNKVMYPNPNRVATPLVDRRLTANPAIYPDAATMRTLWVKRPMPPQAMRMQTRYWTRFKTGY
>NZ_CP009585.1|WP_004523110.1|470393_471506_-|histone-deacetylase
MIPTGLLFDPAFLSHRQGDLVYVVPHGTLNLGEHFDSPLRLAYTKQLLDAVGMTERLTRVAFARATDEQLLRVHRPEYLRQLAEACAVAGEQVVRLGDDAAGSASTEDVARLAAGAACAAVDAVMTGPLRQAYALIRPSGHHAGADFAMGYCYYNNVAIAARHAQAAHGVERVAIVDWDVHHGNGTQQAFYDDPSVLFVSLHEAANFPVDGGEARETGGGAGAGYNANVPLPSGTGDAGYRHAFDELVLPLVEAFAPQLILVSAGQDANAFDPLGRMRVQRDGFRHMARALRQAAGGACGGRIVMLQEGGYSLPYLPIATLGVLEGLVGWNAPFDDPHQFVQYPLGEGERAAVKAARAALAPYWPTLHRS
>NZ_CP009585.1|WP_004525842.1|469507_470383_-|N-carbamoylputrescine-amidase
MRKTTVAVTQMACDWNVDANLSRAERLVRDAAARGAQIVLLQELFETPYFCIDQHPAHLALAQPYEGHPWLMRFASLARELGVVLPVSFFERAGQTQFNSVAIFDADGRALGIYRKTHIPDGPGYTEKYYFTPGDTGFRVWDTAYGRIGVGICWDQWFPECARAMALAGAELLLYPSAIGSEPHDASIDSRAHWHNAQRGHAAANLMPVAASNRVGVERGASGEIVFYGSSFIAGADGEMIVECDRHGEAIATAEFDLDALAYRRRGWGVFRDRRPECYRALSEGAADRVR
>NZ_CP009585.1|WP_009969932.1|467457_468483_+|extracellular-solute-binding-protein
MKAWLTLLLTMTFGFVQAAELHLANWPDWMPPELLKKFEKETGIKTTLDIYDSDATLLSKLQAGGGGYDVVVAGDYYVQVFAKNGLVRKLDKSRLRNMANIMPEYRHPLFDPNRDYTVPYLIFMTGFAYDGARVPGGKLDDSWKSLFDPPAALRGEIADLDSVEELYMAASWYLKQDECTENPEDAKRVLAVLRKQKPYVKTYSNEGTIDRMISRQVVVQHGWSGATVRVQRKLPSAAFALPREGVRMAQDNFLIPAKAKNVNEAHTFLNWMMKPENMAAASNAYLYPNEISGAERYMSADLLKNPAVMLPAAYKERLRPFKLCSPAALALRDKVWTLFKQ
>NZ_CP009585.1|WP_009969933.1|466579_467461_+|ABC-transporter-permease
MNSAQPARHRFPFAVYAAIGAFAFLYAPMVALVALSFNQGDSSLVWAGWGLHGYVDAWQDPTLMRAARNSLALAGTSAAIATALATLAAVVMWAREGRGKTVIESLIGVPLIVPEIVMAIATLLLFSALSIDLSFYTVLLAHVAFCLPFAYLPIRARLRRIDPLLLDAAADLSATPWAAFRQITLPLALPGIAAGAMLAFLTSMDDFVITYFVAGPGVTTLPMYIFGALKFGLTPKINAISTIMLALSAIVAIVGSASVRSDATDDARDESPAGDAAARAHPLFSHTNEIEVL
>NZ_CP009585.1|WP_009972644.1|465728_466583_+|ABC-transporter-permease
MLSPVVALLMVGTLLPIAVVASVSLMRPLAYGGVDWGRFSFDAYLNLIVDRDFDGNLIFQSDHVRIFARSLALAAATTAGCVALGVPTALFIATQPPRRKNALLILVTIPFWTSLVIRSYAWIILIADHGFANRALNGLGVLAGPLGLLYTTPATLIGLLYTFFPFMVLPVYASLDDFDWRIVEAAYDLGATQWRALRDVVIPNCMPGIAAGIGLVFVPALGSYVIPNLLGGSHSMMIGNLIEMKFTQGRNWPLGASLSLALLGLVLAMMLARRLTSAKREVLA
>NZ_CP009585.1|WP_009969935.1|464530_465544_+|helix-turn-helix-domain-containing-protein
MASSDKPRSLAARRPASLHAVAVAVDMLQRRGLSTELILSGSGIAPAELRQPNKIISHAQEMVIYHNAWRMTGDSAIGLAMADAVPLTAYMPLGLAMMVSPTLGAAIELANSCPLLALCYFTTRLETKGSRAVITFSDYSYRPDLYVLNTDMCLAGLRRQMFDLLGGPPTFRQVTLAFDAPKHAYAYESLFQCPIRFSAPAHSFTLDANCMNTPLPMAHQLEHMIAKDACVRREQELEQWVAADVVGKALHYLYDHPFTGTVPALAGALGMSTRTLQRKLKQSGTSLQRLLEQVRRDLLIQDLALGSRSRKDIARHIGYKDPTSVSRARRRWAKEDS
>NZ_CP009585.1|WP_009969936.1|464089_464524_+|GNAT-family-N-acetyltransferase
MEFRPIKESDLGSTYDIRFSVTENRILPHQIHLLDRDRVLEQLRSGFGVLAIEGDAAVGYCTATGGRHAFINALFVRPAWHGAGVGREMLERALAWLREQASESVSLVTDPGSRADGFYQHLGWIRGELDSYGCQVTFRKSLST
>NZ_CP009585.1|WP_038724261.1|462347_463439_-|phage-portal-protein
MSSWRRRASTTAPSACSNVTSSAATTLRNRPRQIRAPARAEVFTFDDPTPVMNRAEILDYVECWSNGEWFEPPVSFAGLAKSFRASTHHSSALFFKANVLASTFRPHRWLSRHAFERWALDFLTFGNGYLERRRNMVGGTLRLEPALAKYVRRKADFSGFVYVNGWQERHEFAPDSVFQLVRPDINQEVYGLPEYLSSLHSAWLNESSTLFRRKYYENGSHAGFILYMTDAAQKQDDVDNMRDALKNAKGPGNFRNVFMYAPGGKKDGIQLIPVSEVAAKDEFFNIKNVTRDDLLAAHRVPPQLLGIVPSNSGGFGTPDTAARVFGRNEIRPLQARFAELNDWLGDEVVRFDDYEIPPAPVAV
>NZ_CP009585.1|WP_009917993.1|475029_475578_+|hypothetical-protein
MEEAYARRALLLHLGSVLQILSRLEGAPDNQSIETLLAANGMLADVPLVEYVVQDMTVREFSARALRAFCLWPQLLLEDPLDCAALALPVRKHLFAGNDAGWKAYAATLREVAPGFDTARSYAAEPHEAEFDLADERDAETGDGPVERDDEADDDGRLRERAAASVESATPAGAPVRRESYE
>NZ_CP009585.1|WP_004543103.1|475840_477289_+|RNA-polymerase-sigma-factor-RpoD/SigA
MKVSARELRYEQGIDRLLELAGARDDTEYADVADEFASAPSSAFAHDLGEPDSLDHQASDESAGAGSFGDKPTRPAHGDTDVDTDWRDDDAPPSGSNDAAPVDTAASTDPLALFVRRMHAVPLLTHAQEIALAAEIEAGREQVLQALAEALDRLDLASLPADPALGRARAALQRARARGDEGARAFARARTAAYAALAAHGWPSAEVDAVRRAMRRLPTSPEKSDAGAQRAFADGEARISAATARMAEANLRLVLSIARKYASRGLDLADLLQEGNLGLLRAIEKFEHRRGFKFSTYATWWIRQAISRAIADRARTIRVPVHVGDEARRVRKAADRIERRSGVSASLAELSEATGLPAERLRAVLTLPREPRSLNAPLGDDDQAEFGDIVEDTSTPSLFDALAHGQMCDVVTSLLKTMSAQEADILRRRFGIGGDEPWSYEQIAARAGVSREQVRRIEKRALQTLRVTAEACNAHDFLDVQP
>NZ_CP009585.1|WP_004535409.1|477307_478921_-|glutamate--cysteine-ligase
MPNNMTSRQTDLLQQRLAVLSTSPTREQLPDGLRGIEKESLRVTRDGMIAFTPHPRALGSALTHPSLTTDYSEALVELITPAERDAATTLERLDELHRYVYASLGDEMLWTDSMPGLLPADDEIPIADYGTSNIGRLKTVYRRGLAYRYGRTMQCIAGIHYNYSLSEEVWRRLHAEEGSTAGIVDYQSERYLALIRNFRRTSWLLMYLFGASPALDAGFLRGRAHKLDTFDAATLYRPHATSLRMSDLGYSNTTAQAALQADYNTLSGYLDALSKAVSEPYPPYEAIGTHRDGEWIQINTNVLQIENEFYSTIRPKRVTYSGERPLHALASRGVQYIEVRCLDIDPFEPTGIALDTARFLDAYLLVCALDESAPLTCDAYRESNANFGRVTMEGRKPGLELTRDGAAVPMRAWADEIFAQIEAAGRVLDDIRGDDTHARAIAAQRAKLDDPELTSSARVLRAMRENGQSFLEFARAQSAAHAAYFHGRPLDEAATRDARALAERSLAEQAELEGKNAGSFDAFVAAYRAYTLNRFSV
>NZ_CP009585.1|WP_004553741.1|479079_480021_-|DNA-3-methyladenine-glycosylase-2-family-protein
MSAAVEPAAVRPDSVVLELPFKSPYDWPRVLRFFAGRAIPGVEAVGDGAYRRTVDHHGAIGTLTVRKHPRKRCLVALVEGDAARHADAAFAARLSTMFDLQADPAAIGAHLARDAWFAPLVGAAPGLRVPGAWSGFELIVRAIVGQQVSVKAATTIVGRLVERAGERLAPHAPGAIGWRFPEPAALAACDVSRIGMPGKRAAALQGVARAVASGDVPLEAYASDPAGVRAALLALPGIGPWTVEYVAMRAWRDADAWPATDLVLMQAIVARDPALDRPASQRLRADAWRPWRAYAAMHLWNEIADRAGSARGG
>NZ_CP009585.1|WP_004523120.1|480017_481112_-|bifunctional-DNA-binding-transcriptional-regulator/O6-methylguanine-DNA-methyltransferase-Ada
MKQPPYPTDDARWAALVARDVDADGAFCYAVKTTGVFCRPSCASRLPRRENVSFFADTGAARAAGYRPCKRCRPEGLPRELDIVNRACAVLDAHRQDRFTLAQLSDAVHVSPFHLQRLFKRVVGVSPRQYQAAQRGAALRDALQSGAAVTRAAVDAGFNSPSRLYESVPRELGMSPSAFRRKGAGLKIDYATADTRLGVVLVAATSKGICKIAFGDAAAPLVDELRTGFANAQIAESPERIAPFIAQVDAYLNGTRRRFELPLDLAATEFQQRVWDALRRIPYGETRSYTQIAEALGAPRAVRAVASACASNPVALAIPCHRVVQKGGSLAGYRWGLPRKAALLDAEAQRAAGESVESAVDHAA
>NZ_CP009585.1|WP_004197761.1|481513_481930_+|lactoylglutathione-lyase
MKFHIHEIDHVVLRAADLAAMTRFYCDVLGCHVEKEQRELGLVQLRAGRSLIDLLAVGAPIDRAGSGAPGKGRNMDHLCLRVEPFDAAALRTHLAAHGARPGDEARRYGADGYGPSLYLFDPEGNMVELKGPPEAVAP
>NZ_CP009585.1|WP_004530511.1|482069_482624_-|YaeQ-family-protein
MALKSTIYKAELQIADMDRHYYADHSLTVARHPSETDERMMVRIAAFALFAHERLEFCKGLSDTDEPDLWQKDLTGAIEVWVDVGQPDERRIAKASGRAGRVNVIAYGGRTSDIWWQGARGKVERLRNVQVTTLADGVAAALGGLAERTMRLQCTIQDGAAWLSSATHDPVAIEWTTLKAREDA
>NZ_CP009585.1|WP_004524604.1|482838_483186_-|hypothetical-protein
MLKRTGLFLALTGGIVAFSVAQANGDVSLKPQQEIQLTKNAWGCLSKDNLDSVLNHERDGKAQAKQQYFDDYRCLSVPEGQRFRVVSVDKGDVQFVSAENSDQQGLWTDARFIKQ
>NZ_CP009585.1|WP_004524603.1|483671_484232_-|spermidine-N1-acetyltransferase
MQIQNEQHTLALRPLERQDLRFVHELNNDAKIMRYWFEEPYETFTELSQLYDQHVHDQRERRFVAFDSDGELVGLVELIELDYIHRRGEFQIIIAPNRQGRGFATRATRLAVEYAFKVLNLRKLYLIVDKSNVAAIRVYEKCGFKHEAELIEEFFGNGQYHNALRMCIFQRDYFAAQPGAELHARE
>NZ_CP009585.1|WP_004524601.1|484908_485064_-|lipoprotein
MKKIIIALAVSAGILSGCAVYVPDQPGVIMAPQGGPGNGFCPPGQAKKGNC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

406055 : 463439

Vibrio_phage(12.5%)

tRNA,portal,protease,transposase

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004203414.1\|406055_406592_+\|protease	ATP-dependent protease subunit HslV	NA	NA	NA	NA
WP_025985937.1\|406601_407945_+\|protease	ATP-dependent protease ATPase subunit HslU	A0A191ZC11	Erwinia_phage	5.3e-39	28.4
WP_085969335.1\|408036_409406_-\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	3.6e-75	54.0
WP_004198315.1\|409842_410385_-	response regulator transcription factor	NA	NA	NA	NA
WP_004198314.1\|410404_411685_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_004198312.1\|411702_411954_-	cysteine-rich CWC family protein	NA	NA	NA	NA
WP_004200214.1\|412278_413178_+	acetylglutamate kinase	NA	NA	NA	NA
WP_004198307.1\|413174_413978_+	pyrimidine 5'-nucleotidase	NA	NA	NA	NA
WP_004525865.1\|413944_414637_+	nucleoid occlusion factor SlmA	NA	NA	NA	NA
WP_004198305.1\|414989_416135_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_004198304.1\|416131_416746_+	methionine biosynthesis protein MetW	NA	NA	NA	NA
WP_004523086.1\|416757_418071_+	AmpG family muropeptide MFS transporter	NA	NA	NA	NA
WP_004534253.1\|418060_419113_+	M48 family metallopeptidase	NA	NA	NA	NA
WP_004531039.1\|419486_420431_-	AraC family transcriptional regulator	NA	NA	NA	NA
WP_004534096.1\|420642_421707_+	NAD(P)-dependent alcohol dehydrogenase	A0A2K9L339	Tupanvirus	1.3e-80	45.8
WP_004190029.1\|422115_422886_-	exodeoxyribonuclease III	R4TWA8	Phaeocystis_globosa_virus	3.4e-30	33.8
WP_004523089.1\|422918_423758_-	polyphosphate kinase	NA	NA	NA	NA
WP_004552444.1\|423884_425357_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB	NA	NA	NA	NA
WP_004525859.1\|425359_426850_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA	NA	NA	NA	NA
WP_004189769.1\|426962_427262_-\|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC	NA	NA	NA	NA
WP_004189550.1\|427626_428670_+	rod shape-determining protein	NA	NA	NA	NA
WP_004189331.1\|428789_429863_+	rod shape-determining protein MreC	NA	NA	NA	NA
WP_004523092.1\|429859_430372_+	rod shape-determining protein MreD	NA	NA	NA	NA
WP_004525858.1\|430555_432967_+	penicillin-binding protein 2	NA	NA	NA	NA
WP_004537749.1\|432978_434127_+	rod shape-determining protein RodA	NA	NA	NA	NA
WP_004523094.1\|434539_435316_-	sel1 repeat family protein	NA	NA	NA	NA
WP_004189570.1\|435312_436098_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA
WP_004189793.1\|436519_436972_-	6-carboxytetrahydropterin synthase QueD	A0A088FAL2	Vibrio_phage	7.6e-14	30.8
WP_004534354.1\|436991_437624_-	7-carboxy-7-deazaguanine synthase	R4TAH8	Halovirus	7.3e-07	31.5
WP_004190026.1\|437717_438452_-	7-cyano-7-deazaguanine synthase QueC	A0A1B0Z0B4	Vibrio_phage	1.6e-50	42.5
WP_004189647.1\|438920_439604_-	response regulator	NA	NA	NA	NA
WP_004523096.1\|439604_442013_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA
WP_004188929.1\|442014_442605_-	DUF4390 domain-containing protein	NA	NA	NA	NA
WP_004537745.1\|442601_444011_-	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA
WP_004189409.1\|444500_445358_-\|protease	zinc metalloprotease HtpX	NA	NA	NA	NA
WP_009969943.1\|445467_446103_-	LysE family translocator	NA	NA	NA	NA
WP_004537742.1\|446223_447207_-\|tRNA	methionyl-tRNA formyltransferase	E3SNR5	Prochlorococcus_phage	1.3e-07	38.0
WP_004525852.1\|447238_447742_-	peptide deformylase	A0A067XQZ3	Caulobacter_phage	2.1e-12	34.3
WP_004553745.1\|447970_449161_+	DNA-protecting protein DprA	S6BFL3	Thermus_phage	2.0e-21	39.2
WP_004190199.1\|449220_449592_+	thioredoxin family protein	NA	NA	NA	NA
WP_004537740.1\|449802_452412_+	DNA topoisomerase III	A0A2P1ELA0	Moumouvirus	2.2e-17	25.6
WP_004189230.1\|452633_453689_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004525849.1\|454127_455144_+	D-2-hydroxyacid dehydrogenase family protein	NA	NA	NA	NA
WP_004189208.1\|455264_456134_-	patatin-like phospholipase family protein	NA	NA	NA	NA
WP_004200732.1\|456171_456576_-	PaaI family thioesterase	NA	NA	NA	NA
WP_133670743.1\|457190_457853_-	hypothetical protein	NA	NA	NA	NA
WP_009972519.1\|457873_459082_-	DUF262 domain-containing protein	A0A0R6PKN1	Moraxella_phage	2.3e-17	27.2
WP_009972518.1\|459280_459598_-	transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.9
WP_009972517.1\|459605_459938_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	1.7e-18	51.9
WP_122657108.1\|460045_461205_-\|transposase	IS3-like element ISBps2 family transposase	A4JX31	Burkholderia_virus	2.5e-77	98.6
WP_004200731.1\|461510_461993_+	DUF2778 domain-containing protein	NA	NA	NA	NA
WP_004523107.1\|461989_462274_+	hypothetical protein	NA	NA	NA	NA
WP_038724261.1\|462347_463439_-\|portal	phage portal protein	A4JWV0	Burkholderia_virus	6.8e-194	92.8

DBSCAN-SWA_2

686870 : 698098

Shigella_phage(20.0%)

integrase

attL 684275:684292|attR 700877:700894

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
684275:684292	attL	NA	NA	NA	NA
WP_004524472.1\|686870_688958_+	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	1.9e-99	35.8
WP_004552489.1\|689280_690180_-	cytochrome	NA	NA	NA	NA
WP_071810427.1\|691011_691191_-	hypothetical protein	NA	NA	NA	NA
WP_076841780.1\|691362_691950_+\|integrase	site-specific integrase	A0A0S2SYQ7	Pseudomonas_phage	3.8e-42	48.9
WP_009932253.1\|692001_692322_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A088CBP5	Shigella_phage	1.0e-12	58.6
WP_009922658.1\|692329_692647_+	helix-turn-helix transcriptional regulator	A0A088CD40	Shigella_phage	6.2e-15	57.0
WP_004530410.1\|692646_693564_+	DUF4935 domain-containing protein	A4PE40	Ralstonia_virus	4.0e-46	40.6
WP_009971192.1\|693817_694360_+	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	2.8e-47	55.8
WP_009932249.1\|694617_695070_+	VRR-NUC domain-containing protein	Q8W6S1	Burkholderia_virus	2.3e-31	58.8
WP_004530408.1\|695069_696149_+	DUF3396 domain-containing protein	A9YX32	Burkholderia_phage	2.2e-160	99.0
WP_004525721.1\|696305_696554_+	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	4.0e-41	97.6
WP_004195754.1\|697453_698098_+	chitin-binding protein	A0A0K1Y848	Apis_mellifera_filamentous_virus	5.7e-07	30.4
700877:700894	attR	NA	NA	NA	NA

DBSCAN-SWA_3

941052 : 957363

Pseudomonas_phage(33.33%)

plate,protease,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004199890.1\|941052_941574_+\|protease	ClpXP protease specificity-enhancing factor	A0A1S5R3H3	Pseudomonas_phage	1.9e-21	51.0
WP_102804204.1\|942777_943897_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_004535005.1\|944160_945231_-	ImmA/IrrE family metallo-endopeptidase	NA	NA	NA	NA
WP_009932052.1\|945237_946038_-	hypothetical protein	NA	NA	NA	NA
WP_004539222.1\|946472_946811_+	DUF4102 domain-containing protein	Q8W6M6	Sinorhizobium_phage	2.4e-17	49.0
WP_009971114.1\|947305_948091_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_009932048.1\|948087_949434_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004521950.1\|949542_950157_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004531875.1\|950531_951203_+	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004521952.1\|951239_951758_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004521953.1\|951774_953265_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004527837.1\|953337_953841_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004204912.1\|953898_954381_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004527836.1\|954460_956299_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_009971111.1\|956262_957363_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_4

1636931 : 1645729

Bacillus_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004537711.1\|1636931_1638332_+	UDP-glucose/GDP-mannose dehydrogenase family protein	A0A127AXI2	Bacillus_phage	4.2e-79	38.5
WP_009921652.1\|1638363_1639287_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	A0A2H4N7X4	Lake_Baikal_phage	1.3e-15	27.1
WP_004537712.1\|1639345_1640338_+	ADP-glyceromanno-heptose 6-epimerase	R9S880	Prochlorococcus_phage	9.1e-28	30.9
WP_004189725.1\|1640409_1640727_+	competence protein ComE	NA	NA	NA	NA
WP_004550116.1\|1641053_1641956_+	cysteine synthase CysM	A0A1X9I5F1	Streptococcus_phage	3.3e-53	39.9
WP_009955227.1\|1642182_1643442_-	lytic murein transglycosylase B	NA	NA	NA	NA
WP_004188957.1\|1643620_1644544_+	histone deacetylase family protein	A0A2K9KZC4	Tupanvirus	8.4e-44	36.5
WP_004547474.1\|1644886_1645729_-	alpha/beta hydrolase	A7XCB7	Tanapox_virus	5.5e-18	27.0

DBSCAN-SWA_5

1910428 : 2003446

101

uncultured_Caudovirales_phage(21.28%)

head,portal,capsid,plate,terminase,protease,tRNA,integrase,tail

attL 1919220:1919238|attR 1977444:1977462

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004192783.1\|1910428_1911955_-\|tRNA	lysine--tRNA ligase	A0A1V0SAC0	Catovirus	2.8e-84	35.6
WP_004532142.1\|1912048_1913153_-	peptide chain release factor 2	A0A0S4KWG0	Pseudomonas_phage	2.2e-06	37.1
WP_004191649.1\|1913513_1915208_-	single-stranded-DNA-specific exonuclease RecJ	A0A0K2FM92	Brevibacillus_phage	1.1e-28	27.3
WP_004193226.1\|1915223_1916300_-	hypothetical protein	NA	NA	NA	NA
WP_004532144.1\|1916866_1918120_+	lipoprotein-releasing ABC transporter permease subunit	NA	NA	NA	NA
WP_024431904.1\|1918112_1918862_+	lipoprotein-releasing ABC transporter ATP-binding protein LolD	G9BWD6	Planktothrix_phage	1.3e-34	38.3
WP_004527360.1\|1918866_1919655_+	TatD family hydrolase	NA	NA	NA	NA
1919220:1919238	attL	NA	NA	NA	NA
WP_011325704.1\|1919707_1922236_+	DNA internalization-related competence protein ComEC/Rec2	NA	NA	NA	NA
WP_004527358.1\|1922272_1923100_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_004192790.1\|1923355_1925017_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	1.9e-150	52.0
WP_004193658.1\|1925013_1925868_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	2.3e-48	40.9
WP_004192585.1\|1925971_1927255_+	phosphopyruvate hydratase	W6LP63	Streptococcus_phage	6.4e-151	62.6
WP_004191789.1\|1927346_1927778_+	cell division protein FtsB	NA	NA	NA	NA
WP_004533974.1\|1928003_1928351_-	lipoprotein	NA	NA	NA	NA
WP_004191092.1\|1928434_1929385_-	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA
WP_004524734.1\|1929423_1929948_-	gamma carbonic anhydrase family protein	NA	NA	NA	NA
WP_004191514.1\|1930157_1930976_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004192762.1\|1931132_1932023_+	alpha/beta fold hydrolase	NA	NA	NA	NA
WP_004193008.1\|1932285_1933116_+	PHP domain-containing protein	NA	NA	NA	NA
WP_004192132.1\|1933180_1933810_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA
WP_004192745.1\|1933908_1934574_+\|protease	site-2 protease family protein	NA	NA	NA	NA
WP_004191887.1\|1934582_1935785_+\|tRNA	tryptophan--tRNA ligase	NA	NA	NA	NA
WP_004524736.1\|1935781_1936396_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004191516.1\|1936440_1937343_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA
WP_004524737.1\|1937453_1938596_+	outer membrane protein assembly factor BamC	NA	NA	NA	NA
WP_004193059.1\|1938600_1939377_+	MBL fold metallo-hydrolase	U5PVD0	Bacillus_phage	3.3e-09	26.6
WP_004532149.1\|1940103_1941291_-	cupin domain-containing protein	NA	NA	NA	NA
WP_004524740.1\|1941359_1941905_+	peptidylprolyl isomerase	NA	NA	NA	NA
WP_009970827.1\|1941884_1943183_-	hypothetical protein	NA	NA	NA	NA
WP_009970826.1\|1943169_1945854_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	9.3e-27	24.3
WP_038718358.1\|1946013_1947315_+\|integrase	integrase family protein	C7BGE7	Burkholderia_phage	4.0e-148	58.7
WP_009890227.1\|1947265_1947508_-	AlpA family phage regulatory protein	C7BGF0	Burkholderia_phage	9.3e-19	59.2
WP_004539932.1\|1947516_1947990_-	hypothetical protein	B5TA88	Burkholderia_phage	2.3e-05	71.4
WP_004555250.1\|1947998_1948328_-	hypothetical protein	NA	NA	NA	NA
WP_009970823.1\|1948441_1949758_-	ParB N-terminal domain-containing protein	NA	NA	NA	NA
WP_009927755.1\|1949757_1950207_-	hypothetical protein	NA	NA	NA	NA
WP_038718357.1\|1950203_1950809_-	hypothetical protein	NA	NA	NA	NA
WP_009970822.1\|1950805_1951141_-	hypothetical protein	NA	NA	NA	NA
WP_009970821.1\|1951192_1951411_-	hypothetical protein	NA	NA	NA	NA
WP_128972304.1\|1951539_1951995_-	hypothetical protein	NA	NA	NA	NA
WP_009909040.1\|1951942_1952428_-	helix-turn-helix transcriptional regulator	A0A193GYL7	Enterobacter_phage	4.4e-12	41.2
WP_009927752.1\|1952894_1953422_+	hypothetical protein	C7BGG0	Burkholderia_phage	9.7e-29	46.5
WP_080002752.1\|1953435_1953789_+	hypothetical protein	NA	NA	NA	NA
WP_009935697.1\|1954095_1954566_+	hypothetical protein	NA	NA	NA	NA
WP_009970820.1\|1954685_1957178_+	virulence protein E	A0A2D1GN57	Marinobacter_phage	4.7e-97	41.8
WP_004533678.1\|1957395_1957983_+	hypothetical protein	NA	NA	NA	NA
WP_009935698.1\|1958330_1958705_+	hypothetical protein	NA	NA	NA	NA
WP_009970819.1\|1959071_1959641_+	MarR family transcriptional regulator	NA	NA	NA	NA
WP_004552756.1\|1959603_1961589_+\|terminase	phage terminase large subunit family protein	A0A2D1GMT1	Marinobacter_phage	2.1e-180	53.4
WP_004533700.1\|1961599_1961806_+	hypothetical protein	NA	NA	NA	NA
WP_009970818.1\|1961802_1963296_+\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	5.8e-135	51.2
WP_009936773.1\|1963292_1964393_+\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	5.1e-48	36.1
WP_025991593.1\|1964419_1964764_+\|head	head decoration protein	NA	NA	NA	NA
WP_004550216.1\|1964798_1965824_+\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	1.7e-109	59.1
WP_004555262.1\|1965827_1966118_+	hypothetical protein	NA	NA	NA	NA
WP_004539763.1\|1966119_1966650_+\|tail	phage tail protein	A0A2H4JBV1	uncultured_Caudovirales_phage	9.2e-11	28.0
WP_009935706.1\|1966639_1967173_+	hypothetical protein	Q9JML9	Wolbachia_phage	3.6e-23	39.5
WP_025991594.1\|1967175_1967856_+\|plate	phage baseplate assembly protein V	A0A1B2LRU5	Wolbachia_phage	2.4e-19	35.1
WP_004539700.1\|1967920_1968127_+	hypothetical protein	NA	NA	NA	NA
WP_004547840.1\|1968123_1968468_+	hypothetical protein	A0A2H4JA09	uncultured_Caudovirales_phage	1.4e-23	50.9
WP_004533630.1\|1968464_1969358_+\|plate	baseplate J protein	D5LGZ3	Escherichia_phage	1.9e-48	40.7
WP_004539949.1\|1969350_1969926_+\|tail	phage tail protein I	Q6QI98	Burkholderia_phage	6.0e-32	47.7
WP_004539647.1\|1969913_1971377_+	hypothetical protein	A4JWL8	Burkholderia_virus	8.0e-214	77.8
WP_009909071.1\|1971392_1971845_+\|tail	tail assembly chaperone	A4JWL9	Burkholderia_virus	4.8e-45	77.7
WP_014917516.1\|1971910_1973080_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	4.0e-160	72.7
WP_004533620.1\|1973090_1973594_+\|tail	phage major tail tube protein	Q7M2A5	Pseudomonas_phage	1.2e-41	50.0
WP_009970817.1\|1973663_1973966_+\|tail	phage tail assembly protein	V5YST8	Pseudomonas_phage	1.9e-05	37.2
WP_004533668.1\|1974053_1976468_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	4.0e-69	33.5
WP_004552771.1\|1976476_1977358_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	8.6e-30	37.0
WP_004540041.1\|1977332_1977539_+\|tail	phage tail protein	A0A2H4J9Z9	uncultured_Caudovirales_phage	4.0e-15	61.2
1977444:1977462	attR	NA	NA	NA	NA
WP_004552772.1\|1977548_1978601_+	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	2.7e-78	44.2
WP_004533694.1\|1978676_1978871_+	hypothetical protein	NA	NA	NA	NA
WP_004552773.1\|1978863_1979361_+	lysozyme	A4JX20	Burkholderia_virus	2.9e-67	78.8
WP_038718353.1\|1979360_1979906_+	lysozyme	Q8W6S5	Burkholderia_virus	1.3e-84	97.2
WP_009970814.1\|1980048_1980837_+	DNA adenine methylase	Q8W6S4	Burkholderia_virus	5.7e-150	95.8
WP_004552776.1\|1980872_1981616_-	hypothetical protein	A4PE26	Ralstonia_virus	8.0e-37	42.9
WP_004547844.1\|1981612_1982131_-	hypothetical protein	NA	NA	NA	NA
WP_038763907.1\|1982087_1982561_-	hypothetical protein	NA	NA	NA	NA
WP_076901090.1\|1982553_1983060_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	2.3e-19	40.1
WP_012729878.1\|1983056_1983479_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	4.9e-15	49.4
WP_076886479.1\|1984688_1985006_+	hypothetical protein	NA	NA	NA	NA
WP_076886478.1\|1984980_1985937_+	RNA-directed DNA polymerase	Q7M2A9	Enterobacteria_phage	4.9e-47	38.4
WP_004540053.1\|1986508_1986970_+	excisionase family DNA-binding protein	K4ICM4	Acidithiobacillus_phage	6.7e-50	67.3
WP_009972574.1\|1986974_1987550_+	PIN domain-containing protein	K4HZX4	Acidithiobacillus_phage	1.3e-71	69.4
WP_139897735.1\|1987782_1988751_+	hypothetical protein	NA	NA	NA	NA
WP_009972572.1\|1988951_1989944_+	DUF3644 domain-containing protein	A0A0N9RUA4	Staphylococcus_phage	6.3e-05	48.1
WP_076853220.1\|1990170_1990410_-	DNA mismatch repair protein	NA	NA	NA	NA
WP_004191077.1\|1991246_1991426_+	hypothetical protein	NA	NA	NA	NA
WP_004538129.1\|1991609_1991882_+	hypothetical protein	NA	NA	NA	NA
WP_004191664.1\|1992161_1992965_-	inositol monophosphatase	NA	NA	NA	NA
WP_004532151.1\|1993008_1993260_+	hypothetical protein	NA	NA	NA	NA
WP_004524746.1\|1993265_1994171_+	RNA methyltransferase	NA	NA	NA	NA
WP_004193377.1\|1994361_1995147_+	serine O-acetyltransferase	NA	NA	NA	NA
WP_004550230.1\|1995482_1996283_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA
WP_004193779.1\|1996307_1996799_-	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	4.2e-10	33.3
WP_004191635.1\|1996879_1997455_-	peptidyl-prolyl cis-trans isomerase	A0A1V0SCU1	Indivirus	5.3e-12	39.3
WP_004195907.1\|1997511_1998234_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_004192752.1\|1998465_1999863_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	1.8e-42	33.8
WP_004527343.1\|1999910_2000849_+	DNA-3-methyladenine glycosylase 2 family protein	NA	NA	NA	NA
WP_004193249.1\|2000952_2001924_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_004527342.1\|2001967_2003446_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA

DBSCAN-SWA_6

2198288 : 2206476

Burkholderia_virus(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004535518.1\|2198288_2198552_+	hypothetical protein	Q8W6S4	Burkholderia_virus	5.0e-26	85.5
WP_004534826.1\|2198736_2199462_-	hypothetical protein	A4PE26	Ralstonia_virus	1.7e-31	43.5
WP_038763587.1\|2199468_2200071_-	hypothetical protein	NA	NA	NA	NA
WP_004527237.1\|2200412_2200919_-	DUF4123 domain-containing protein	A4PE24	Ralstonia_virus	5.1e-19	40.1
WP_004527236.1\|2200915_2201341_-	PAAR domain-containing protein	A4JWV5	Burkholderia_virus	3.8e-15	49.4
WP_009937072.1\|2201621_2202017_-	hypothetical protein	NA	NA	NA	NA
WP_004531416.1\|2202270_2202498_+	hypothetical protein	Q8W6S4	Burkholderia_virus	3.8e-22	75.8
WP_004527234.1\|2202533_2202767_-	hypothetical protein	A4PE26	Ralstonia_virus	4.3e-13	60.6
WP_004550288.1\|2202842_2203304_-	avidin	NA	NA	NA	NA
WP_004527233.1\|2204239_2204422_+	hypothetical protein	NA	NA	NA	NA
WP_004193371.1\|2204548_2205172_-	phospholipase D family protein	NA	NA	NA	NA
WP_004527232.1\|2205366_2206476_-	class II histone deacetylase	A0A2K9L2T7	Tupanvirus	3.1e-37	31.6

DBSCAN-SWA_7

3616263 : 3627221

Agrobacterium_phage(16.67%)

protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004196461.1\|3616263_3618564_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	5.1e-167	42.1
WP_004194131.1\|3618560_3618875_-\|protease	ATP-dependent Clp protease adapter ClpS	A0A218MMY6	uncultured_virus	4.4e-13	44.6
WP_004196460.1\|3619407_3619611_+	cold-shock protein	A0A2H4N7Y6	Lake_Baikal_phage	6.8e-23	81.8
WP_004536101.1\|3619740_3621351_-	multicopper oxidase family protein	NA	NA	NA	NA
WP_009929279.1\|3621363_3621546_+	hypothetical protein	NA	NA	NA	NA
WP_004189552.1\|3621518_3622778_-	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	5.2e-12	63.0
WP_004189780.1\|3623045_3623624_+	pseudouridine synthase	NA	NA	NA	NA
WP_071810810.1\|3623886_3624105_+	hypothetical protein	NA	NA	NA	NA
WP_004185496.1\|3624296_3624806_+	DUF192 domain-containing protein	A0A1B1IUW8	uncultured_Mediterranean_phage	5.5e-13	41.2
WP_004526281.1\|3625106_3627221_+	elongation factor G	E4ZFJ7	Streptococcus_phage	5.8e-56	26.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP009586

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009586_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009586_1

2305986-2306078

Orphan

Consensus_repeat	Method
TCGCCGCCGCGCGCGACGACGCGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009586_1

>merge|NZ_CP009586|1|2305986-2306078|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGCTGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGATCGCCGCCGCGCGCGCCGACGCGC

>NZ_CP009586|1|1|2305986-2306078|CRISPRCasFinder
TCGCCGCCGCGCGCGACGACGCGC	TGAAGGACGCGCTCGCGCAGGCCGCCGCCGAGCGCGAGCGGCTGA
TCGCCGCCGCGCGCGCCGACGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009586.1\|WP_004529178.1\|2309573_2310599_+\|alcohol-dehydrogenase-AdhP	unknown	unknown	gnl\|CDD\|176257
NZ_CP009586.1\|WP_011205710.1\|2306513_2308514_+\|F0F1-ATP-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|183987
NZ_CP009586.1\|WP_004524990.1\|2312269_2313835_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|185008
NZ_CP009586.1\|WP_004524989.1\|2311219_2311729_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009586.1\|WP_004187193.1\|2305518_2305767_+\|F0F1-ATP-synthase-subunit-C	unknown	unknown	gnl\|CDD\|184067
NZ_CP009586.1\|WP_009972311.1\|2308510_2309359_+\|F0F1-ATP-synthase-subunit-gamma	unknown	unknown	gnl\|CDD\|376304
NZ_CP009586.1\|WP_009972317.1\|2303570_2304026_+\|F0F1-ATP-synthase-subunit-epsilon	unknown	unknown	gnl\|CDD\|184057
NZ_CP009586.1\|WP_004201694.1\|2304515_2304824_+\|membrane-protein	unknown	unknown	gnl\|CDD\|274462
NZ_CP009586.1\|WP_004546783.1\|2316169_2317294_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223912
NZ_CP009586.1\|WP_004530237.1\|2304022_2304523_+\|AtpZ/AtpI-family-protein	unknown	unknown	gnl\|CDD\|378198
NZ_CP009586.1\|WP_004529184.1\|2297251_2298430_-\|acetate/propionate-family-kinase	unknown	unknown	gnl\|CDD\|235922
NZ_CP009586.1\|WP_004548632.1\|2299840_2301634_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|213656
NZ_CP009586.1\|WP_009972310.1\|2310658_2311162_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009586.1\|WP_038764129.1\|2317296_2320485_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009586.1\|WP_004524995.1\|2320481_2321555_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|235136
NZ_CP009586.1\|WP_009972307.1\|2314184_2316020_-\|response-regulator	unknown	unknown	gnl\|CDD\|237425
NZ_CP009586.1\|WP_004187346.1\|2304820_2305522_+\|F0F1-ATP-synthase-subunit-A	unknown	unknown	gnl\|CDD\|237383
NZ_CP009586.1\|WP_014920165.1\|2301994_2303581_+\|F0F1-ATP-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|183615
NZ_CP009586.1\|WP_004524980.1\|2298426_2299830_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	unknown	unknown	gnl\|CDD\|236180
NZ_CP009586.1\|WP_004524981.1\|2301765_2302023_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009586.1\|WP_004529178.1\|2309573_2310599_+\|alcohol-dehydrogenase-AdhP	gnl\|CDD\|176257	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	0
NZ_CP009586.1\|WP_011205710.1\|2306513_2308514_+\|F0F1-ATP-synthase-subunit-alpha	gnl\|CDD\|183987	PRK13343, PRK13343, F0F1 ATP synthase subunit alpha; Provisional.	0
NZ_CP009586.1\|WP_004524990.1\|2312269_2313835_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|185008	PRK15048, PRK15048, methyl-accepting chemotaxis protein II; Provisional.	2.47951e-79
NZ_CP009586.1\|WP_004187193.1\|2305518_2305767_+\|F0F1-ATP-synthase-subunit-C	gnl\|CDD\|184067	PRK13468, PRK13468, F0F1 ATP synthase subunit C; Provisional.	4.45015e-37
NZ_CP009586.1\|WP_009972317.1\|2303570_2304026_+\|F0F1-ATP-synthase-subunit-epsilon	gnl\|CDD\|184057	PRK13447, PRK13447, F0F1 ATP synthase subunit epsilon; Provisional.	1.17254e-62
NZ_CP009586.1\|WP_004201694.1\|2304515_2304824_+\|membrane-protein	gnl\|CDD\|274462	TIGR03165, F1F0_chp_2, F1/F0 ATPase, Methanosarcina type, subunit 2. Members of this protein family are uncharacterized, highly hydrophobic proteins encoded in the middle of apparent F1/F0 ATPase operons. We note, however, that this protein is both broadly and sparsely distributed. It is found in about only about two percent of microbial genomes sequenced, with the first ten examples found coming from the Euryarchaeota, Chlorobia, Betaproteobacteria, Deltaproteobacteria, and Planctomycetes. In most of these species, surrounding operon appears to represent a second F1/F0 ATPase system, and the member proteins belong to subfamilies with the same phylogenetic distribution as the current protein family.	3.23546e-10
NZ_CP009586.1\|WP_004546783.1\|2316169_2317294_-\|ABC-transporter-permease	gnl\|CDD\|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.30959e-25
NZ_CP009586.1\|WP_009972311.1\|2308510_2309359_+\|F0F1-ATP-synthase-subunit-gamma	gnl\|CDD\|376304	pfam00231, ATP-synt, ATP synthase.	1.49395e-33
NZ_CP009586.1\|WP_004529184.1\|2297251_2298430_-\|acetate/propionate-family-kinase	gnl\|CDD\|235922	PRK07058, PRK07058, acetate/propionate family kinase.	0
NZ_CP009586.1\|WP_004530237.1\|2304022_2304523_+\|AtpZ/AtpI-family-protein	gnl\|CDD\|378198	pfam09527, ATPase_gene1, Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophobic stretches and is presumed to be a subunit of the enzyme. It carries two transmembrane helices and is a magnesium or calcium uniporter. The atp operon of alkaliphilic Bacillus pseudofirmus OF4, as in most prokaryotes, contains the eight structural genes for the F-ATPase (ATP synthase), which are preceded by an atpI gene that encodes a membrane protein with 2 TMSs. A tenth gene, atpZ, has been found in this operon, which is upstream of and overlapping with atpI.	4.39073e-17
NZ_CP009586.1\|WP_004524995.1\|2320481_2321555_-\|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|235136	PRK03598, PRK03598, putative efflux pump membrane fusion protein; Provisional.	1.83012e-39
NZ_CP009586.1\|WP_009972307.1\|2314184_2316020_-\|response-regulator	gnl\|CDD\|237425	PRK13557, PRK13557, histidine kinase; Provisional.	5.77561e-132
NZ_CP009586.1\|WP_038764129.1\|2317296_2320485_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.17234e-92
NZ_CP009586.1\|WP_014920165.1\|2301994_2303581_+\|F0F1-ATP-synthase-subunit-beta	gnl\|CDD\|183615	PRK12597, PRK12597, F0F1 ATP synthase subunit beta; Provisional.	0
NZ_CP009586.1\|WP_004524980.1\|2298426_2299830_-\|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase	gnl\|CDD\|236180	PRK08190, PRK08190, bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated.	0
NZ_CP009586.1\|WP_004548632.1\|2299840_2301634_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|213656	TIGR01838, Poly-beta-hydroxybutyrate_polymerase, poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell. [Fatty acid and phospholipid metabolism, Biosynthesis].	1.95969e-179
NZ_CP009586.1\|WP_004187346.1\|2304820_2305522_+\|F0F1-ATP-synthase-subunit-A	gnl\|CDD\|237383	PRK13421, PRK13421, F0F1 ATP synthase subunit A; Provisional.	1.54059e-122

>NZ_CP009586.1|WP_004187193.1|2305518_2305767_+|F0F1-ATP-synthase-subunit-C
MNNLIEVVSIAAAALAVSFGAIGPALAEGRAVGAAMDAIARQPDASGTVSRTLFVGLAMIETMAIYCLVVALLLLFANPFVK
>NZ_CP009586.1|WP_004187346.1|2304820_2305522_+|F0F1-ATP-synthase-subunit-A
MNASPLSTVPLFSVGPVGISAPVLATWAIMAVLVALALVARRRLSVDAPSRLQSVLELFVATVDAQIADTMQTPPARYRALIGTIFVLVFCANGASLVPGVEPPTAHLETDAALALVVLAATLYYGVRARGVRGYLATFAEPTWVMIPLNVVEQLTRTFSLIVRLFGNVMSGVFVIGIVLSLAGLFVPIPLMALDLLTGTVQAYIFMVLSMVFIGAAVSGDETSAPRRGQENT
>NZ_CP009586.1|WP_004201694.1|2304515_2304824_+|membrane-protein
MIEMWETARASFDGIAAAIGLALGFAAGACHFVSLGWNSRLFVAGRAGVALALQFARVALAVAVLVVLARAGFGMLVAGSAGFFAARAIAVRRAAALTGARR
>NZ_CP009586.1|WP_004530237.1|2304022_2304523_+|AtpZ/AtpI-family-protein
MMKRRPPEVKREAREARDDAARGDARHAGAGAAPDDPRGAARRDPPPGSRAARGGATHPAARAAEPAAPKPAADRVERAAHTAAARAARGARDPEPSLGRRLAQIGVLGWTIVAPTLAALALGRWLDRMFATRVFFSAPLLMLGAALGLWLAWRWMKAQQHGDRDD
>NZ_CP009586.1|WP_009972317.1|2303570_2304026_+|F0F1-ATP-synthase-subunit-epsilon
MGAELRVTIATPARVCVDDLPIVSLRAEDASGAFGIRAGHVDFVTLLRASVVRWCTADGATHYAALDGGVLRVTRGARIEIACRDAVLGESLAELEAVVRGVRATQLDEKRRARVDETRLHAQAVRRLLTYLRPEHAKDGVHAPLKPETLE
>NZ_CP009586.1|WP_014920165.1|2301994_2303581_+|F0F1-ATP-synthase-subunit-beta
MADPQATNGTGAACAERDASDVGDARDEGAGRVVAVRGAVIDVAFDGGALPALNEALTIPVDGAAPILAEVHAHLSDAAVRALALGPTGGLRRGAAVRATGGPIRVPVGDAVLGRLLSVTGAPGDDGAALAADVERRPIHRGAPPLAEQKSANALFATGIKVIDLLAPLAQGGKAAMFGGAGVGKTVLVMELIHAMVERYRGISVFAGIGERSREGHEMLLDMRGSGVLGRTVLVYGQMNEPPGARWRVPLTALAIAEYFRDERAQNVLLLMDNVFRFVQAGAEVSGLLGRLPSRVGYQPTLASEVAALQERIASVEGAAVTAIEAVYVPADDFTDPAVTAIAAHVDSMVVLSRAMAAEGMYPAIDPVASSSILLDPLVVGEAHVEVAIEVRRVIEHYRELQDVIALLGIDELGADDRRLVGRARRLQRFLTQPFAVTEAFTGQAGASVEIADTIAGCRAILRGDCDDWRESSLYMVGTLDDARRKEAAAREADARREAAAVASGAGPGTTSDPASGSAEPQGARHGR
>NZ_CP009586.1|WP_004524981.1|2301765_2302023_-|hypothetical-protein
MPFVACGSATVAPVWLVRRWLHHNGARRPPADLGQETGNRQTKRGIAQSETIDASASGADTVRAASIVDSNQIPQTYAWLQWPCQ
>NZ_CP009586.1|WP_004548632.1|2299840_2301634_-|alpha/beta-fold-hydrolase
MDTRHAPESGAPDAPLPAHPPASYAPESPYRIFDLAKEASVAKLTSGLSPASLQLALADWLIHLAAAPGKRAELATLALRHAALLGQYLLEAATGRTPAAPAQPSPGDRRFRAGAWQLEPYRFWHQSFLLAEQWWRAATRDVPGVSPHHEDVVAFSARQMLDTFAPANYVATNPEIAQRTALTGGANLAQGVWNYLDDVRRLITKQPPAGAEQFELGRNLATTPGRVVFRNHLIELLQYSPTTPDVYAQPVLIVPAWIMKYYILDLSAHNSLIRYLVGEGHTVFCISWRNVDASDRDLSLDDYRKLGVMDALDTIGAIVPGEKIHATGYCLGGTLLSIAAAAMANTGDDRLASVTLLAAQTDFAEPGELQLFIDDSEIHFLESMMWERGYLGAHQMAGSFQLLMSNDLIWSRVIHDYLLGERTPMIDLMAWNADSTRMPYRMHSEYLRHLFLDNDLATNRYVIDGQTVSVHNIRAPFFVVGTEHDHIAPWRSVYKIHYLSGSDVTFVLTAGGHNAGIVSEPGHAKRHYRMKMTAAAAPSISPDEWLAGATDFEGSWWPAWHAWLARHSSPQRVAPPPLGKPGAHTLGDAPGTYVFQK
>NZ_CP009586.1|WP_004524980.1|2298426_2299830_-|bifunctional-enoyl-CoA-hydratase/phosphate-acetyltransferase
MDREILQNRPFDSLAIGDSASLVRTASRDDIDLFAAMSGDVNPAHLDAAFAAHDLFGHVVVHGMWTGALVSAVLGTKLPGPGTIYLDQTLEFRHPVAPGDTITATVTVAEKRPEKRIVLLDTRCTNQDGHVVLRGTATVIAPDTPITWERVPGPEVAVRRHDRYETFVRDAREQPPLRTAIVHPCSPDALRAAIDARDANLIEPILIGPQAKIRAIADAAGVDLAGVPIEAVEHSHAAAARAVEMGGAGEVAALMKGSLHTDELLAAVIGPASRLRTERRISHVYAMDVPAYPKPLLITDAAINIAPTLEQKRDICQNAVDLLHVLGVERPRVAVLAAVETVNPKMPSTLDAAALTVMAARGQIAGAIVDGPLAFDNAVSAVAAMSKGIASPVAGDADVLLVPDLEAGNMLAKQLMYFAGADAAGLVLGARLPIILTSRADSLRVRIASAALAKLVAERTRAGALAS
>NZ_CP009586.1|WP_004529184.1|2297251_2298430_-|acetate/propionate-family-kinase
MSEPLLLTFNAGSSTLKIGLYSVANGEPAPLGRGKIDFNRAPLQFEYANGGEAHAVPLAAPVTDDLHAVLDEALGWIDAHLSVHELVSVGHRVVHGGDTFDGPVRIDERTLDAIAALVPLAPLHQPQSVRLIRALRHLRPHLPQVASFDTAFHRTQSDLVRRFALPRALFDAGIKRYGFHGLSYRYVAGRLRERHPSIARGKVVAAHLGSGASLCALDAGVSRDTSMGFSTLDGIPMATRCGALDAGVVLHLQKTLGRTLDDVEQMLYHRSGLLGVSGVSGDARALLADPSAGARDALELFAFRIAGETARLAATLGGLDALVFTAGIGEHQPQTRAAVCERLRWLGVELDAHANARNAETVSRDGSRVAVLVVPTDEEQVIARDAASVLHA
>NZ_CP009586.1|WP_011205710.1|2306513_2308514_+|F0F1-ATP-synthase-subunit-alpha
MTPTPDAPAAAAADAATGAGWLARRRGALARVALAPVAQAIGRVERVADGIAFVSGLEDTMLNEVLRFEGGVTGFAHTLDEDLISVVLLDPDAGVRAQTAVARTGAVLEVPAGPQLLGRVVDPLGRPLDGGAPLDAAHTLPIERAAPAIIERDLVSEPLDTGVLIVDALFTIGRGQRELIIGDRATGKTSLAIDAIVNQRHSDVICVYVAIGQRASAVRRVIDAVRRYGAPERCVFVVAPAACAPGLQWIAPFAGFSIAEYFRDRGQHALVVVDDLTKHAATHRELALLTREPPGREAYPGDIFYVHARLLERAAKLSAALGGGSLSALPIAETDAGNLAAYIPTNLISITDGQIVLDSALFAANQRPAVDVGLSVSRVGGKAQHPALRAASGRLRLDYAQFLELEAFTRFGGLTDARLRAQITRGERIRALITQPRFRALRTLDEVVLLKALAAGALDAMSPDLVAPLRERLPAWLDARIAALTPALAPPRDWLADDAALDALAESVGELIERIAADAARRATAGMPAEDAAGDIGGAFGGEQARGDADRDADHGANREVSREVSPEASREVSREVSCEVSHEADRDAAADAARVAGRAPGRAEPDRAAPRAMPDGPPRAQADGDRASASRPRPDARGDAARTAPSPQGGADANVDAEAEARHKR
>NZ_CP009586.1|WP_009972311.1|2308510_2309359_+|F0F1-ATP-synthase-subunit-gamma
MSDKLAAIEARTDTARQLQTVIGAMQGVAAARAHEAQQRLPGIRASAATVGAAIGDALSAGARSGETAAGARAAPRARLVVVLCSEQGFVGAYNAQLIEHATRPGPSVSREYMMVGSRGAMLADAGGVPLVWRTPMAARADDVVHLANRITDALYAHLAKRGAQPVSIVHAMPGGAARLEVTERRLLPFDYARFDTAPRAQPPLVHLPPATLLAELAQAYVFVELCEAAMLAFAAENEARTRAMIAARESVERALGDLLQAYRIARQDEITADIVELAASGL
>NZ_CP009586.1|WP_004529178.1|2309573_2310599_+|alcohol-dehydrogenase-AdhP
MAQYMKAAVVHAFGEPLRIEEVPVPTPGAGQILVNVKASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGFVAAVGEGVRHVKEGDRVGVPWLYTACGHCEYCQTGWETLCHEQQNTGYSVNGSYAEYVLADPNYVGHLPSNVAFDEIAPILCAGVTVYKGIRVTDTRPGQWIAISGIGGLGHVAVQYAKAMGLHVVAVDVAPQKLELARKLGAAFVVDASKDDPAAVIQKEIGGVHGVLVTAVSRGAFAQALGMVRRGGTVSLNGLPPGDFPLPIFSTVLNGITVRGSIVGTRRDLQESLDFAAEGLVRAHIHRDKLEHINGVFSALREGKVDGRIVLTGQ
>NZ_CP009586.1|WP_009972310.1|2310658_2311162_+|hypothetical-protein
MRGAGRASPSRARRYENVSKEPNTHREAGAPVHRYRLQVRNMNGECRTYELRLSSLDDGYTLEIDEWLNFPDMHLGDVTPVHVSRPVQFAVPAHEFYRRRRAFRTELIESVAAALRAGEVVRMRDSPDEYPGGHAGNPWVNWIRADLRANPGGRPPPVGDDMQDLIH
>NZ_CP009586.1|WP_004524989.1|2311219_2311729_-|hypothetical-protein
MRRIYFLLPDADTARAIVDELLLKRIEWRHIHVVANDRVPLENLPEASIAQSSDLLPALARGTAAGGVTGALAGLAAIAFPPAGLTIAGGAVVAFAIAGAGFGAWVGTMIGVSVPNTRLKHFEDAVDNGELLMMIDVHRDRVEEIEALVKQHHPNAHLEGTDPTIPAFP
>NZ_CP009586.1|WP_004524990.1|2312269_2313835_+|methyl-accepting-chemotaxis-protein
MPTLSFRQKLWLPLVISLIALLLVSISSAWLSYQTRMEERRNDLTNVAHVGLSIVREYAALAQRGVLTDAQARKEALERLRSVRYGSDGYFIVIDSSPRMIMHPIKPDTVGKDLRHVADADGRHHYLTFASVAQSPQGGFVDYVFAHPNAHPAKAVDKLGYVIRYAPWDWIISTGAYIDDIQAAFAKSLCLSAGVFALLAALLALSVVYTNRGIERMIGGDPRIAAHMAGVIASGDLATPFATRREDRSSLMFAISQMRDALANAVAQIRASAGYVATTAGEIADSNMDLSSHTECQATALQQAASSMQRLTERVRDTADRARAASELAGSAARITDRGGDMVVRVVAAMNDIRAESRKMVDIIGVIEGIAFQTNILALNAAVEAARAGNEGRGFAVVASEVRVLAQRSASAAKDIRALIGRAAERVGNGAELVEATGATIGEAQHAICRVTGIVQDIAAAATDQSQGLEQINAAVSQMDSVTRRNATLVEHAAIAAQSLNEQSRCLQDAVAAFRTEALGC
>NZ_CP009586.1|WP_009972307.1|2314184_2316020_-|response-regulator
MHVEVFAQHPSCPGWHGEMARRIRAFDWSATELGPLERWPASLVAAVRTVLASPVPLVMLWGASGYMLYNDAYAAFAGGRHPYLLGQPVELGWPEVADFNRNVMRTCLAGGALSYRDKALVLLRNGRPEEVWMDLYYSPLAGDDGAPAGVLAVVVETTERVLAARHRDRAKAALHETNAELRRLTETLEQRVADAITERASIEEQLRQAQKMEAIGSLTGGIAHDFNNVLQVVSSNLQMLSAELGEDARAQRRIASAANAVARGAQLASHLLAFARRQPLAPAVLEPRGLIDGMREMLHRALGESVHVDADLRDDVWNVLADRHQFENALLNLAINARDAMRGEGTLKITACNIVLDAGRHARRNGLPPGEYVAFDIADNGVGMTPDILERVFEPFFTTKPDGQGTGLGLSMVFGFVKQSGGHTSIESAPGRGTTVRLLLPRCREAPAGEPAAQRRLPAEGGRETILVVEDDADVRLAVVDMLAQLGYKVITASDGEAGLLALESGAPIDLLFTDVIMPGRIKGGELARRAAQRVPPVPVLFTSGYTRDEIFHAGRLDPGVMLLGKPYRRDELAHKVRSVLDAHASARRARGARHAQADPRAKTAAARVQR
>NZ_CP009586.1|WP_004546783.1|2316169_2317294_-|ABC-transporter-permease
MRRLAIVYRLGVKELWSLVRDPILLVLIAYTFTASIYSAATARPDTLHMAPIAIIDEDASPLSARIASAFFPPQFALPRMVTLAEADRGMNAGDFTFVLDIPPNFQRDVLAGRPAQIQLNVDATRMSQAFTGNGYVQQIVSGEIDDFARRYRANTAPPVDIAMHMRFNPNLDQTWFGSLMEVINNVTLLSMVLTGAALIREREHGTIEHLLVMPVTPGEIMLAKVWSMGLVVACAAAFSLAFVVRGALHVPIEGSVALFVIGMAIHLFATTSMGIFLATLVRSMPQFGMLLVLVLLPLQLLSGSLTPRESMPFAVQNIMLAAPTTHFVEIGQAILYRGAGIETVWRQFLILAVIGTALFLLSLKRFRKTIGQMA
>NZ_CP009586.1|WP_038764129.1|2317296_2320485_-|ATP-binding-cassette-domain-containing-protein
MSAPSVVRFSDVSLRYGKTVALERITLEIPAGLTIGLIGPDGVGKSSLLALAAGARALQTGAVDALGGDMRSRRHRERVCRRIAYMPQGLGKNLYPTLSVEENLQFFARLFGHDADERRRRIDALTRSTGLFAFLSRPAGKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLARAQFWDLIARIRSERPAMSVIVATAYMDEAQRFDWLIAMDAGRVLATGAPAELLARTGCDSLEAAFIALLPEDERRGHKPVTLEPLRADAQTGTAIEARGLTMRFGDFTAVDHVSFRIRRGEIFGFLGSNGCGKSTTMKMLTGLLPATEGTAQLFGKTVDPKDINTRRRVGYMSQAFSLYSELTVRQNLVLHARLFGVPAAEIDARVDEMARRFGLADIYDMLPDSLPLGMRQRLSLAVAMVHKPELLILDEPTSGVDPVARDSFWQLMIDLARRDRVTIFISTHFMNEAQRCDRISLMHAGRVLASDAPAALVRARGAATLEEAFIGYLVDASAQEAQGGAGGRPGAGERAAGESLAGRGAATDGDADGAHARPAAYANGAAQHRAPDADAAGTDVAAETGARDDARTAHAAGHSAGNDVRATVGSEVGSEAGLAAGAESGSERAREPAADAGAAIDVEPGASAESATAAVAPARHAESAATSPRAGNAPAGTPFAAAPPSHAAPAEPPHRAFSAQRALSYMWREMLELRRDPVRATLALIGSLVLMCVIGIGISLDVEDLTYAVLDRDQTELSHDYALNLSGSRYFVERPPIADYAALDRRMRDGELSLAIEIPPNFARDVERGAPAQIGMWIDGAMPQRAETIRGYAIGMHTMWLADKARHRLGVTLAPRAEVVTRYRYNPDVKSLPAMIPAVMPLLLLMLPAMLTALAVVRERELGSILNLYVTPVTRTEFLIGKQVPYVVLAMLNFLLMTMLARIAFDVPVKGSFMTLLLAVLIFNVVATGIGLLASTFTRSQVAAIVMTIIGTMIPTVQFAGLLTPLSSLEGTGRLIGLVYPATYMLSISRGVFNKALSLHDLYSQFWPLAASVPVILGATILLLKKQER
>NZ_CP009586.1|WP_004524995.1|2320481_2321555_-|HlyD-family-efflux-transporter-periplasmic-adaptor-subunit
MIQVTRKQIVAAAAVVVVALGAYYGWTLLRHQGPGDGFASGNGRIEATEIDVATKLPGRIDAILVDEGDFVKAGQPLANMQIQVLRAQYDEATAQRQRALNTAAGVQSQVAQRKSDKAAAQAMVVLRESELDAAERRLARSQTLSREGASSLQELDDDRARARSAQAAVSAAAAQVAAAQAAIEATEAQLVAAHSAVTAADATVARVQADIDDSQLASPRDGRVQYRVAQPGEVLPAGGKVLNLVDLSDVYMTFFLPETVVGRVALGADARIILDAAPNYVIPATVSFVSSTAQFTPKTVETANERQKLMFRVKARIDRELLQKHLKLVKTGLPGVAWVRVDPSKPWPAQLMVKVPQ

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

89039 : 190390

Tupanvirus(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004532408.1\|89039_89399_+\|transposase	transposase	NA	NA	NA	NA
WP_158332758.1\|89480_90005_+	hypothetical protein	NA	NA	NA	NA
WP_004539529.1\|90547_91231_-	Fe2+-dependent dioxygenase	Q5GQB0	Synechococcus_phage	6.5e-17	31.5
WP_004539528.1\|91227_91974_-	sel1 repeat family protein	NA	NA	NA	NA
WP_004524147.1\|91975_94222_-	TonB-dependent siderophore receptor	NA	NA	NA	NA
WP_004528489.1\|94621_95917_-	aspartate carbamoyltransferase	Q84489	Paramecium_bursaria_Chlorella_virus	6.3e-45	38.0
WP_004528487.1\|96195_96330_+	entericidin A/B family lipoprotein	NA	NA	NA	NA
WP_004546110.1\|96471_96918_-	cupin domain-containing protein	NA	NA	NA	NA
WP_004532396.1\|96914_97352_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_038733383.1\|97583_99065_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA
WP_004532390.1\|99378_99612_+	hypothetical protein	NA	NA	NA	NA
WP_004528481.1\|99723_99951_+	hypothetical protein	NA	NA	NA	NA
WP_004528480.1\|100047_100746_+	hypothetical protein	NA	NA	NA	NA
WP_038717060.1\|100761_110247_+	type I polyketide synthase	A0A2K9KZV5	Tupanvirus	6.4e-30	24.7
WP_004539523.1\|110272_111334_+	hypothetical protein	NA	NA	NA	NA
WP_038764051.1\|111330_115359_+	amino acid adenylation domain-containing protein	A0A2K9KZV5	Tupanvirus	9.6e-52	26.6
WP_038717059.1\|115376_120080_+	non-ribosomal peptide synthetase	A0A2K9KZV5	Tupanvirus	6.6e-44	20.7
WP_004532400.1\|120076_121396_+	hypothetical protein	NA	NA	NA	NA
WP_004528474.1\|121392_122457_+	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_004536596.1\|122468_123416_+	MsnO8 family LLM class oxidoreductase	NA	NA	NA	NA
WP_038764049.1\|123412_125230_+	fatty acyl-AMP ligase	NA	NA	NA	NA
WP_004528471.1\|125226_125499_+	acyl carrier protein	NA	NA	NA	NA
WP_080002853.1\|125836_126178_-	hypothetical protein	NA	NA	NA	NA
WP_004533073.1\|126307_127177_-	hypothetical protein	NA	NA	NA	NA
WP_009972528.1\|127953_128349_+	hypothetical protein	NA	NA	NA	NA
WP_158332757.1\|128429_128858_-\|transposase	transposase	NA	NA	NA	NA
WP_004539515.1\|129147_130230_+\|transposase	IS630 family transposase	NA	NA	NA	NA
WP_038764046.1\|137642_145055_-	hypothetical protein	NA	NA	NA	NA
WP_004528459.1\|145290_149877_-	insecticidal toxin complex	NA	NA	NA	NA
WP_076849357.1\|152251_152506_+	Com family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_004528453.1\|152905_153541_+	hypothetical protein	NA	NA	NA	NA
WP_004528452.1\|153684_154113_+	hypothetical protein	NA	NA	NA	NA
WP_076867424.1\|155080_155167_-	hypothetical protein	NA	NA	NA	NA
WP_009972538.1\|155323_155965_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
WP_123875343.1\|156129_156390_-	hypothetical protein	NA	NA	NA	NA
WP_004528446.1\|157206_157401_+	hypothetical protein	NA	NA	NA	NA
WP_004539190.1\|157464_157638_+	hypothetical protein	NA	NA	NA	NA
WP_079999965.1\|158001_158955_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_102804204.1\|159909_161030_-\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.6e-49	39.5
WP_080343647.1\|161129_161369_+	hypothetical protein	NA	NA	NA	NA
WP_009972582.1\|161528_161984_-	transcriptional regulator	NA	NA	NA	NA
WP_024431120.1\|163872_171429_+	hypothetical protein	NA	NA	NA	NA
WP_004528437.1\|171452_174422_+	RHS repeat protein	NA	NA	NA	NA
WP_045889295.1\|174509_178967_+	virulence protein	NA	NA	NA	NA
WP_004539183.1\|179022_181881_+	RHS repeat protein	NA	NA	NA	NA
WP_004539182.1\|182110_189364_+	toxin	NA	NA	NA	NA
WP_009971876.1\|189611_189872_-\|transposase	transposase	NA	NA	NA	NA
WP_009971875.1\|189847_190390_+\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_2

292976 : 362213

Burkholderia_virus(58.0%)

plate,protease,terminase,capsid,portal,holin,head,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004528329.1\|292976_294977_+\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	6.4e-105	46.2
WP_004532965.1\|295150_295759_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_004542846.1\|296067_297558_-	arginine-ornithine antiporter	NA	NA	NA	NA
WP_004528326.1\|298266_299103_+	EamA family transporter	NA	NA	NA	NA
WP_004528324.1\|299298_300447_-	DUF971 domain-containing protein	NA	NA	NA	NA
WP_004531806.1\|300503_301298_-	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_004528321.1\|301711_301891_+	hypothetical protein	NA	NA	NA	NA
WP_004528320.1\|301883_302360_+	NUDIX hydrolase	A0A0E3JJF3	Streptomyces_phage	1.6e-14	42.9
WP_004528319.1\|302356_302812_+	hypothetical protein	NA	NA	NA	NA
WP_004528318.1\|302813_303803_+	thymidylate synthase	NA	NA	NA	NA
WP_009971828.1\|303818_304559_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_004547623.1\|304800_305601_+	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	NA	NA	NA	NA
WP_004551667.1\|305690_307121_+	thiamine pyridinylase	NA	NA	NA	NA
WP_004531802.1\|307374_308121_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_154585294.1\|308170_308641_+	hypothetical protein	NA	NA	NA	NA
WP_004528311.1\|309213_309693_+	carboxypeptidase regulatory-like domain-containing protein	NA	NA	NA	NA
WP_024431809.1\|309790_312304_+	cation-translocating P-type ATPase	M1HM40	Paramecium_bursaria_Chlorella_virus	6.2e-57	27.9
WP_004537634.1\|312355_312979_+	hypothetical protein	NA	NA	NA	NA
WP_004532969.1\|313393_314014_+	hypothetical protein	NA	NA	NA	NA
WP_004531797.1\|314413_314668_+	hypothetical protein	NA	NA	NA	NA
WP_161605781.1\|315141_316371_+	CapA family protein	S4VS02	Pandoravirus	1.0e-113	56.2
WP_011205537.1\|316664_319472_-	hsp70 family protein	A0A2H4UU19	Bodo_saltans_virus	3.0e-07	26.1
WP_004539133.1\|319475_321323_-	Hsp70 family protein	NA	NA	NA	NA
WP_004524145.1\|321319_321895_-	DUF2760 domain-containing protein	NA	NA	NA	NA
WP_004542746.1\|322264_323029_-	2-keto-4-pentenoate hydratase	NA	NA	NA	NA
WP_011205535.1\|323540_324092_+	ProQ/FinO family protein	NA	NA	NA	NA
WP_004524142.1\|324105_324435_+	H-NS histone family protein	NA	NA	NA	NA
WP_009971809.1\|325159_326275_+	alanine dehydrogenase	NA	NA	NA	NA
WP_009971808.1\|327109_328210_-	phage late control D family protein	K4PAY4	Burkholderia_phage	5.8e-201	98.6
WP_009935906.1\|328209_328635_-\|tail	phage tail protein	A4JWS2	Burkholderia_virus	3.3e-72	99.3
WP_009971807.1\|328652_331613_-	membrane protein	A4JWS3	Burkholderia_virus	0.0e+00	99.4
WP_004552648.1\|331615_331729_-\|tail	GpE family phage tail protein	A0A089FGX3	Burkholderia_phage	5.4e-14	100.0
WP_009971806.1\|331737_332082_-\|tail	phage tail assembly protein	K4NXA3	Burkholderia_phage	2.9e-50	93.0
WP_038718834.1\|332139_332649_-\|tail	phage major tail tube protein	K4NZR9	Burkholderia_phage	1.2e-92	97.6
WP_004531063.1\|332664_333837_-\|tail	phage tail sheath protein	Q45YG5	Burkholderia_virus	6.8e-224	100.0
WP_004533037.1\|333892_334564_-\|tail	phage tail fiber assembly protein	A4JWS8	Burkholderia_virus	9.2e-117	99.6
WP_009971804.1\|334580_336944_-	hypothetical protein	A4JWY0	Burkholderia_virus	0.0e+00	98.9
WP_038718832.1\|336954_337509_-\|tail	phage tail protein I	A4JWT0	Burkholderia_virus	6.1e-98	97.8
WP_009971802.1\|337501_338407_-\|plate	baseplate assembly protein	K4NZR5	Burkholderia_phage	2.1e-156	95.3
WP_004531058.1\|338403_338766_-\|plate	bacteriophage baseplate assembly protein W	K4PAX6	Burkholderia_phage	1.7e-61	100.0
WP_009971801.1\|338762_339443_-\|plate	phage baseplate assembly protein V	A4JWY4	Burkholderia_virus	4.1e-120	97.3
WP_009971800.1\|339616_340393_+	site-specific DNA-methyltransferase	K4NZW3	Burkholderia_phage	5.2e-148	99.2
WP_009897040.1\|340558_341089_-	hypothetical protein	K4NX96	Burkholderia_phage	3.0e-94	100.0
WP_004531055.1\|341215_341683_-	phage virion morphogenesis protein	K4NZQ8	Burkholderia_phage	1.2e-78	100.0
WP_004531054.1\|341679_342096_-\|tail	phage tail protein	A4JWT7	Burkholderia_virus	3.3e-72	100.0
WP_009971799.1\|342200_342641_-	bacteriophage protein	K4NXJ2	Burkholderia_phage	3.8e-71	100.0
WP_009941345.1\|342637_343450_-	DUF3380 domain-containing protein	A4JWZ0	Burkholderia_virus	1.2e-150	100.0
WP_004524440.1\|343446_343719_-\|holin	phage holin family protein	K4NX91	Burkholderia_phage	8.8e-42	100.0
WP_004524439.1\|343720_344065_-	membrane protein	K4NZQ3	Burkholderia_phage	2.9e-50	100.0
WP_004524438.1\|344079_344286_-\|tail	tail protein	K4PAW7	Burkholderia_phage	2.4e-31	100.0
WP_009971798.1\|344282_344534_-	hypothetical protein	A4JWZ4	Burkholderia_virus	7.6e-40	100.0
WP_004531050.1\|344533_345013_-\|head	head completion/stabilization protein	K4NZV5	Burkholderia_phage	5.8e-81	100.0
WP_009972547.1\|345112_345802_-\|terminase	terminase endonuclease subunit	K4NX86	Burkholderia_phage	4.3e-117	99.6
WP_009972548.1\|345798_346812_-\|capsid	phage major capsid protein, P2 family	A4JWP9	Burkholderia_virus	1.0e-188	99.4
WP_009972549.1\|346845_347655_-\|capsid	GPO family capsid scaffolding protein	A4JWQ0	Burkholderia_virus	9.0e-143	98.9
WP_009972550.1\|347798_349568_+\|terminase	terminase ATPase subunit family protein	K4NXI4	Burkholderia_phage	0.0e+00	99.2
WP_011205524.1\|349564_350620_+\|portal	phage portal protein	A4JWQ2	Burkholderia_virus	7.5e-206	99.4
WP_009971793.1\|350663_351020_-	putative addiction module antidote protein	A4JWV1	Burkholderia_virus	1.5e-41	98.9
WP_024431052.1\|351022_351319_-	type II toxin-antitoxin system RelE/ParE family toxin	A4JWV2	Burkholderia_virus	1.1e-50	100.0
WP_011205521.1\|351910_353032_-	DUF3396 domain-containing protein	A4JWV3	Burkholderia_virus	4.4e-220	100.0
WP_011205520.1\|353040_353778_-	VRR-NUC domain-containing protein	A4JWV4	Burkholderia_virus	5.9e-133	100.0
WP_004532793.1\|353774_354308_-	bacteriophage gp29 protein	A4JWV5	Burkholderia_virus	8.4e-97	100.0
WP_009897078.1\|354410_354533_-	CopG family transcriptional regulator	A4JWV6	Burkholderia_virus	5.9e-14	100.0
WP_004532770.1\|354766_355420_-	AAA family ATPase	A4JWV7	Burkholderia_virus	1.4e-114	100.0
WP_004532731.1\|355509_355716_-	ogr/Delta-like zinc finger family protein	A4JWV8	Burkholderia_virus	8.7e-34	100.0
WP_009971787.1\|355712_355979_-	ogr/Delta-like zinc finger family protein	A4JWV9	Burkholderia_virus	3.1e-44	100.0
WP_009971786.1\|355994_357788_-	replication endonuclease	A4JWW0	Burkholderia_virus	0.0e+00	100.0
WP_009971785.1\|357993_359235_-	hypothetical protein	A4JWW2	Burkholderia_virus	1.7e-225	100.0
WP_009971784.1\|359436_359649_-	hypothetical protein	A4JWW3	Burkholderia_virus	1.1e-34	100.0
WP_009971783.1\|359955_360171_-	hypothetical protein	A4JWW5	Burkholderia_virus	2.1e-30	100.0
WP_009897093.1\|360174_360396_-	hypothetical protein	A4JWW6	Burkholderia_virus	1.6e-38	100.0
WP_004532752.1\|360711_361494_-	hypothetical protein	A4JWW8	Burkholderia_virus	6.7e-143	100.0
WP_009897097.1\|361874_362213_+	helix-turn-helix domain-containing protein	A4JWW9	Burkholderia_virus	5.4e-57	100.0

DBSCAN-SWA_3

1014882 : 1082377

Aeromonas_phage(25.0%)

holin,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004530063.1\|1014882_1015833_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004523149.1\|1016100_1017045_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_004530060.1\|1017516_1019220_+	thermolysin metallopeptidase	NA	NA	NA	NA
WP_004545903.1\|1019337_1020564_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA
WP_004200640.1\|1020618_1021761_-	porin	NA	NA	NA	NA
WP_004198249.1\|1021869_1021992_-	hypothetical protein	NA	NA	NA	NA
WP_004530804.1\|1021988_1023026_-\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_009971503.1\|1023022_1024576_-\|holin	choline-sulfatase	NA	NA	NA	NA
WP_004551409.1\|1024738_1025611_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004186920.1\|1025754_1026630_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_004530057.1\|1026716_1028372_-	APC family permease	NA	NA	NA	NA
WP_004186918.1\|1028552_1029416_-	glycine betaine ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004530056.1\|1029525_1030671_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA
WP_004535147.1\|1030691_1031933_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA
WP_004530055.1\|1031984_1032770_-	drug:proton antiporter	NA	NA	NA	NA
WP_004202150.1\|1032766_1033939_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_004186901.1\|1033943_1035869_-	(Fe-S)-binding protein	NA	NA	NA	NA
WP_004186960.1\|1035871_1037935_-	NADH:flavin oxidoreductase	NA	NA	NA	NA
WP_004186987.1\|1037995_1038529_-	4-vinyl reductase	NA	NA	NA	NA
WP_004186989.1\|1038679_1039651_-	membrane dipeptidase	NA	NA	NA	NA
WP_004523136.1\|1039723_1040998_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	5.3e-105	54.1
WP_009933096.1\|1041009_1041261_-	hypothetical protein	NA	NA	NA	NA
WP_004198247.1\|1041430_1042456_+	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_004530054.1\|1042633_1043833_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	8.4e-12	27.2
WP_009971500.1\|1044266_1045283_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_023358579.1\|1045471_1047037_+	glycoside hydrolase 68 family protein	NA	NA	NA	NA
WP_009971496.1\|1047169_1048837_+	glycoside hydrolase family 32 protein	F8WPR5	Bacillus_phage	3.5e-56	31.4
WP_038730208.1\|1049350_1050604_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA
WP_004532078.1\|1051096_1052680_-	efflux transporter outer membrane subunit	NA	NA	NA	NA
WP_038724161.1\|1052676_1052859_-	hypothetical protein	NA	NA	NA	NA
WP_004524284.1\|1052984_1053980_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_004524286.1\|1054208_1055795_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA
WP_011205424.1\|1055791_1057111_-	glycosyltransferase	NA	NA	NA	NA
WP_009972586.1\|1057000_1057327_+	hypothetical protein	NA	NA	NA	NA
WP_004528661.1\|1057368_1058268_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_004536812.1\|1058818_1059094_-	hypothetical protein	NA	NA	NA	NA
WP_004190471.1\|1059414_1059840_-	hypothetical protein	NA	NA	NA	NA
WP_004190863.1\|1059862_1060222_-	hypothetical protein	NA	NA	NA	NA
WP_004525554.1\|1060280_1063784_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004525553.1\|1063780_1065439_-	OmpA family protein	NA	NA	NA	NA
WP_004525552.1\|1065521_1066883_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004202226.1\|1066879_1067473_-	hypothetical protein	NA	NA	NA	NA
WP_004190606.1\|1067478_1067868_-	DUF4150 domain-containing protein	NA	NA	NA	NA
WP_004525551.1\|1067910_1068627_-	DUF3540 domain-containing protein	NA	NA	NA	NA
WP_004525550.1\|1068629_1069700_-	pentapeptide repeat-containing protein	NA	NA	NA	NA
WP_004547074.1\|1069699_1071916_-	DUF2169 domain-containing protein	NA	NA	NA	NA
WP_004190563.1\|1071919_1074208_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004536618.1\|1074373_1076665_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_009971490.1\|1076655_1079526_-	type VI secretion system ATPase TssH	A0A2I7REQ1	Vibrio_phage	2.4e-60	27.2
WP_004190851.1\|1079528_1080518_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004196180.1\|1080514_1082377_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_4

1246251 : 1254103

Burkholderia_virus(57.14%)

integrase,transposase

attL 1234074:1234089|attR 1253681:1253696

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1234074:1234089	attL	NA	NA	NA	NA
WP_004525420.1\|1246251_1246536_-	BrnA antitoxin family protein	K4NZP3	Burkholderia_phage	1.4e-10	50.0
WP_009971435.1\|1246519_1246789_-	BrnT family toxin	NA	NA	NA	NA
WP_004537565.1\|1247340_1247616_+	bacteriophage protein Gp49	Q6JIH4	Burkholderia_virus	5.2e-42	95.6
WP_004538072.1\|1247892_1248114_+	hypothetical protein	NA	NA	NA	NA
WP_004552392.1\|1248161_1248380_+	hypothetical protein	Q6JIH9	Burkholderia_virus	9.8e-36	98.6
WP_004542548.1\|1248610_1249192_-	hypothetical protein	A9YX38	Burkholderia_phage	2.2e-21	100.0
WP_009971437.1\|1249459_1249597_+	hypothetical protein	Q8W6Q6	Burkholderia_virus	2.9e-17	97.8
WP_004538073.1\|1249593_1250793_+\|integrase,transposase	DDE-type integrase/transposase/recombinase	A4JX31	Burkholderia_virus	3.3e-226	99.7
WP_038718655.1\|1251200_1252967_-	hypothetical protein	NA	NA	NA	NA
WP_009971430.1\|1253054_1253327_-	hypothetical protein	NA	NA	NA	NA
WP_009971429.1\|1253509_1254103_-	recombinase family protein	A0A219Y912	Aeromonas_phage	1.3e-21	37.5
1253681:1253696	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2087746 : 2139603

Burkholderia_virus(16.67%)

transposase,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_122657108.1\|2087746_2088905_+\|transposase	IS3-like element ISBps2 family transposase	A4JX31	Burkholderia_virus	2.5e-77	98.6
WP_004552203.1\|2089003_2089918_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004524799.1\|2090099_2090804_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_004205458.1\|2091560_2091878_-	chorismate lyase	NA	NA	NA	NA
WP_071898311.1\|2091814_2092060_-	chorismate lyase	NA	NA	NA	NA
WP_009972395.1\|2092187_2093432_-	flavin-dependent oxidoreductase	NA	NA	NA	NA
WP_004190842.1\|2093697_2093883_-	hypothetical protein	NA	NA	NA	NA
WP_038719040.1\|2093901_2095800_+	DUF3857 and transglutaminase domain-containing protein	NA	NA	NA	NA
WP_009972394.1\|2095842_2097276_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_045889348.1\|2097330_2097732_-	TssQ family T6SS-associated lipoprotein	NA	NA	NA	NA
WP_009972391.1\|2098371_2098890_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004530163.1\|2098886_2100290_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004190689.1\|2100305_2101622_+	DotU family type VI secretion system protein	NA	NA	NA	NA
WP_004524806.1\|2101624_2105254_+	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_009972387.1\|2105250_2106165_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA
WP_004529325.1\|2106149_2106377_-	hypothetical protein	NA	NA	NA	NA
WP_045889350.1\|2106375_2108967_+	serine/threonine protein kinase	M1I231	Acanthocystis_turfacea_Chlorella_virus	5.0e-09	26.6
WP_009982092.1\|2109019_2110099_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004524810.1\|2110161_2110740_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_004190849.1\|2110732_2112241_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_004190698.1\|2112300_2112792_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA
WP_004196148.1\|2112810_2113371_+\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_004546299.1\|2113375_2115247_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004537556.1\|2115243_2116689_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_004533146.1\|2116701_2119368_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	5.2e-78	30.6
WP_004203275.1\|2119364_2121569_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	9.6e-46	29.9
WP_004196151.1\|2121643_2122297_+	hypothetical protein	NA	NA	NA	NA
WP_004555378.1\|2122256_2123516_+	DUF746 domain-containing protein	NA	NA	NA	NA
WP_004524822.1\|2124247_2124988_-	hypothetical protein	NA	NA	NA	NA
WP_038719033.1\|2126330_2127485_+	LacI family transcriptional regulator	NA	NA	NA	NA
WP_024431041.1\|2129257_2129896_+	hypothetical protein	NA	NA	NA	NA
WP_004524825.1\|2129938_2131183_+	ATP-binding cassette domain-containing protein	G9BWD6	Planktothrix_phage	7.1e-22	32.8
WP_004524827.1\|2131218_2132460_+	extracellular solute-binding protein	NA	NA	NA	NA
WP_004524828.1\|2132522_2133446_+	sugar ABC transporter permease	NA	NA	NA	NA
WP_004524829.1\|2133446_2134298_+	carbohydrate ABC transporter permease	NA	NA	NA	NA
WP_004546333.1\|2134302_2136474_+	alpha-galactosidase	NA	NA	NA	NA
WP_009972372.1\|2136714_2138748_+	hypothetical protein	NA	NA	NA	NA
WP_004539264.1\|2139195_2139603_+\|transposase	transposase	A0A0P0ZCV4	Stx2-converting_phage	2.4e-11	36.5

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009585

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP009586

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection