CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009241	Paenibacillus sp. FSL H7-0357, complete genome	23 crisprs	csa3,WYL,cas14j,DEDDh,RT,cas3,DinG	2	5	11	0

1. NZ_CP009241

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009241_1

• CRISPR_ID: NZ_CP009241_1
• CRISPR_location: 70548-70639
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_1

Consensus_repeat	Method
AAGAAGCGCAGGCTTCACAAGACTT	CRISPRCasFinder

spacers of NZ_CP009241_1

>1.1|70573|42|NZ_CP009241|CRISPRCasFinder
AAGCGAACGCTTACGAAGCAAGTTTTGTTACGAAGCAAATTT

CRISPR arrays and Neighbor proteins around NZ_CP009241_1

CRISPR arrays

The CRISPR arrays of NZ_CP009241_1

>merge|NZ_CP009241|1|70548-70639|CRISPRCasFinder
AAGAAGCGCAGGCTTCACAAGACTTAAGCGAACGCTTACGAAGCAAGTTTTGTTACGAAGCAAATTTAAGAAGCGCAGGCTTCACAAAACTT

>NZ_CP009241|1|1|70548-70639|CRISPRCasFinder
AAGAAGCGCAGGCTTCACAAGACTT	AAGCGAACGCTTACGAAGCAAGTTTTGTTACGAAGCAAATTT
AAGAAGCGCAGGCTTCACAAAACTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_156130789.1|77717_79235_+|lysine--tRNA-ligase	unknown	unknown	gnl|CDD|234778
NZ_CP009241.1|WP_038584434.1|67341_68226_+|Hsp33-family-molecular-chaperone-HslO	unknown	unknown	gnl|CDD|234643
NZ_CP009241.1|WP_144024462.1|57584_58529_+|serine/threonine-protein-kinase	unknown	unknown	gnl|CDD|270916
NZ_CP009241.1|WP_038584455.1|75004_75556_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	unknown	unknown	gnl|CDD|238269
NZ_CP009241.1|WP_038584431.1|66526_67294_+|type-III-pantothenate-kinase	unknown	unknown	gnl|CDD|237347
NZ_CP009241.1|WP_038584422.1|60743_62795_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	unknown	unknown	gnl|CDD|273520
NZ_CP009241.1|WP_038584443.1|72269_72851_+|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl|CDD|235552
NZ_CP009241.1|WP_038584463.1|76980_77460_+|transcription-elongation-factor-GreA	unknown	unknown	gnl|CDD|234693
NZ_CP009241.1|WP_038584437.1|69383_70322_+|cysteine-synthase-A	unknown	unknown	gnl|CDD|273465
NZ_CP009241.1|WP_038584448.1|73725_74583_+|dihydropteroate-synthase	unknown	unknown	gnl|CDD|238380
NZ_CP009241.1|WP_038584445.1|72847_73729_+|4-amino-4-deoxychorismate-lyase	unknown	unknown	gnl|CDD|181067
NZ_CP009241.1|WP_038584428.1|65654_66530_+|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl|CDD|238806
NZ_CP009241.1|WP_038584440.1|70647_72273_+|anthranilate-synthase-component-I-family-protein	unknown	unknown	gnl|CDD|223225
NZ_CP009241.1|WP_038584418.1|60093_60633_+|hypoxanthine-phosphoribosyltransferase	unknown	unknown	gnl|CDD|223707
NZ_CP009241.1|WP_038584425.1|63071_64010_+|quinolinate-synthase-NadA	unknown	unknown	gnl|CDD|376787
NZ_CP009241.1|WP_038584452.1|74631_74994_+|dihydroneopterin-aldolase	unknown	unknown	gnl|CDD|376737
NZ_CP009241.1|WP_038584461.1|75760_76777_+|tRNA-dihydrouridine-synthase-DusB	unknown	unknown	gnl|CDD|129820
NZ_CP009241.1|WP_038584458.1|75507_75717_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|197775
NZ_CP009241.1|WP_081965636.1|68234_69179_+|hypothetical-protein	unknown	unknown	gnl|CDD|234605
NZ_CP009241.1|WP_038584415.1|58605_60048_+|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl|CDD|238950

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_156130789.1|77717_79235_+|lysine--tRNA-ligase	gnl|CDD|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP009241.1|WP_038584434.1|67341_68226_+|Hsp33-family-molecular-chaperone-HslO	gnl|CDD|234643	PRK00114, hslO, Hsp33 family molecular chaperone HslO.	6.40974e-129
NZ_CP009241.1|WP_144024462.1|57584_58529_+|serine/threonine-protein-kinase	gnl|CDD|270916	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.	5.82655e-24
NZ_CP009241.1|WP_038584455.1|75004_75556_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase	gnl|CDD|238269	cd00483, HPPK, 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK). Folate derivatives are essential cofactors in the biosynthesis of purines, pyrimidines, and amino acids as well as formyl-tRNA. Mammalian cells are able to utilize pre-formed folates after uptake by a carrier-mediated active transport system. Most microbes and plants lack this system and must synthesize folates de novo from guanosine triphosphate. One enzyme from this pathway is HPPK which catalyzes pyrophosphoryl transfer from ATP to 6-hydroxymethyl-7,8-dihydropterin (HP). The functional enzyme is a monomer. Mammals lack many of the enzymes in the folate pathway including, HPPK.	6.89658e-65
NZ_CP009241.1|WP_038584431.1|66526_67294_+|type-III-pantothenate-kinase	gnl|CDD|237347	PRK13318, PRK13318, type III pantothenate kinase.	2.166e-140
NZ_CP009241.1|WP_038584422.1|60743_62795_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein	gnl|CDD|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	0
NZ_CP009241.1|WP_038584443.1|72269_72851_+|aminodeoxychorismate/anthranilate-synthase-component-II	gnl|CDD|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	2.9543e-134
NZ_CP009241.1|WP_038584463.1|76980_77460_+|transcription-elongation-factor-GreA	gnl|CDD|234693	PRK00226, greA, transcription elongation factor GreA; Reviewed.	2.85972e-69
NZ_CP009241.1|WP_038584437.1|69383_70322_+|cysteine-synthase-A	gnl|CDD|273465	TIGR01139, Cysteine_synthase, cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate. [Amino acid biosynthesis, Serine family].	8.18163e-168
NZ_CP009241.1|WP_038584448.1|73725_74583_+|dihydropteroate-synthase	gnl|CDD|238380	cd00739, DHPS, DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.	2.28155e-115
NZ_CP009241.1|WP_038584445.1|72847_73729_+|4-amino-4-deoxychorismate-lyase	gnl|CDD|181067	PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional.	1.78875e-103
NZ_CP009241.1|WP_038584428.1|65654_66530_+|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl|CDD|238806	cd01572, QPRTase, Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes. It catalyses the reaction of quinolinic acid (QA) with 5-phosphoribosyl-1-pyrophosphate (PRPP) in the presence of Mg2+ to produce nicotinic acid mononucleotide (NAMN), pyrophosphate and carbon dioxide. QPRTase functions as a homodimer with two active sites, each formed by the C-terminal region of one subunit and the N-terminal region of the other.	1.29655e-152
NZ_CP009241.1|WP_038584440.1|70647_72273_+|anthranilate-synthase-component-I-family-protein	gnl|CDD|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	7.61701e-170
NZ_CP009241.1|WP_038584418.1|60093_60633_+|hypoxanthine-phosphoribosyltransferase	gnl|CDD|223707	COG0634, Hpt, Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism].	8.74563e-97
NZ_CP009241.1|WP_038584425.1|63071_64010_+|quinolinate-synthase-NadA	gnl|CDD|376787	pfam02445, NadA, Quinolinate synthetase A protein. Quinolinate synthetase catalyzes the second step of the de novo biosynthetic pathway of pyridine nucleotide formation. In particular, quinolinate synthetase is involved in the condensation of dihydroxyacetone phosphate and iminoaspartate to form quinolinic acid. This synthesis requires two enzymes, a FAD-containing "B protein" and an "A protein".	0
NZ_CP009241.1|WP_038584452.1|74631_74994_+|dihydroneopterin-aldolase	gnl|CDD|376737	pfam02152, FolB, Dihydroneopterin aldolase. This enzyme EC:4.1.2.25 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin in the biosynthetic pathway of tetrahydrofolate.	2.25594e-46
NZ_CP009241.1|WP_038584461.1|75760_76777_+|tRNA-dihydrouridine-synthase-DusB	gnl|CDD|129820	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family. This model represents one branch of COG0042 (Predicted TIM-barrel enzymes, possibly dehydrogenases, nifR3 family). This branch includes NifR3 itself, from Rhodobacter capsulatus. It excludes a broadly distributed but more sparsely populated subfamily that contains sll0926 from Synechocystis PCC6803, HI0634 from Haemophilus influenzae, and BB0225 from Borrelia burgdorferi. It also excludes a shorter and more distant archaeal subfamily.The function of nifR3, a member of this family, is unknown, but it is found in an operon with nitrogen-sensing two component regulators in Rhodobacter capsulatus.Members of this family show a distant relationship to alpha/beta (TIM) barrel enzymes such as dihydroorotate dehydrogenase and glycolate oxidase. [Unknown function, General].	1.47425e-152
NZ_CP009241.1|WP_038584458.1|75507_75717_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|197775	smart00530, HTH_XRE, Helix-turn-helix XRE-family like proteins.	1.52158e-12
NZ_CP009241.1|WP_081965636.1|68234_69179_+|hypothetical-protein	gnl|CDD|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	9.2175e-25
NZ_CP009241.1|WP_038584415.1|58605_60048_+|tRNA-lysidine(34)-synthetase-TilS	gnl|CDD|238950	cd01992, PP-ATPase, N-terminal domain of predicted ATPase of the PP-loop faimly implicated in cell cycle control [Cell division and chromosome partitioning]. This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This domain has a strongly conserved motif SGGXD at the N terminus.	7.33624e-73

Protein sequences

>NZ_CP009241.1|WP_038584437.1|69383_70322_+|cysteine-synthase-A
MAKVVNSVTDLIGGTPLVRLNRIVPEGSAEIYLKLEYQNPGSSVKDRIALSIVEEAEKEGLLKPGGTIVEATSGNTGIGLALVAAAKGYKAIIVMPETMSLERRNLLRAYGAELVLTPGSEGMNGAVKKAEQILSENPSFFLAEQFKNKANLKIHLETTGPEIVEAIESIGGPLDAFIAGVGTGGTISGAGEVLKGQYPDVKIYAVEPAASPILAGGKPGPHKIQGIGANFIPEILNQDIYDEIIHVENDEAFETARRVAKEEGVLSGISSGAAVFAALKVAKELGAGKKVVVIIPSNGERYLSTPLYNFEA
>NZ_CP009241.1|WP_081965636.1|68234_69179_+|hypothetical-protein
MMTRQERALRNAVILLAVATLMLGGLLFWSLRAMSILKGEPADGESPDIASAGGQPVTDQAWVDELKKKYGNDVLLGMLNHIVVDKEAKALGVAVTDVEIEQELKRSMTGYGSEEQYYAQMQSELGLSRQEVREEAVYRLTLQAVATAGITITDAEIDNYLAENSERFTPRKEMQLSIIKVATYSEAERVMDRLEQGEDFAALAKELSIDEESRGRGGSIGTVEEEDPFWPEDLLKTAAQLDEGDIAGPLQTGDDYAIIRLEKMIDPKSQDQTEIREQVRRELALEQAAPLQQVESDLRAKYDTAIYIDNSLQD
>NZ_CP009241.1|WP_038584434.1|67341_68226_+|Hsp33-family-molecular-chaperone-HslO
MDNKKDRLVRGTALDGRVRAFAVRTTALVDELRRRHDTYPTATAALGRTVTAAAMMGAMLKGQEKLAVMVKGNGPIGQITAESNAFGEVRGYVTNPHVHLPSNSLGKLDVAGAVGTEGFIDISKDLGMKEPYRGSVPIISGELGDDFTYYFAVSEQTPAAVGLGVLVETDNSVRVAGGFIVQLLPGLTDEEITEIERAVGSLPSVTALLEEGLEPEEMLRYLLPDAVIMDELDIKFVCQCSRERVEQTLVSLGEKELERLIEEDDQAEVVCHFCNEAYVFNKDELQVILDQAKS
>NZ_CP009241.1|WP_038584431.1|66526_67294_+|type-III-pantothenate-kinase
MMLAVDIGNTNIVLGVYRQRELLHHFRLNTARQSTVDEYGVLIHNLFSMSGLSVKDIEGVIISSVVPPLVQVIVEMCVKYIGKDPLLVGPGIKTGLNLRYENPREVGADRIVNAVAAIEQYKCPLVVVDFGTATTFDCIDAGANYLGGAIVPGLGISTEALYQRASKLPRIELEKPKKVIGRNTVHAMQAGIIFGYAGQVEGIVRRIKLEMNAPVLKVIATGGLAPLIAGETDCIDEVNPMLTLEGLRIIYDRNK
>NZ_CP009241.1|WP_038584428.1|65654_66530_+|carboxylating-nicotinate-nucleotide-diphosphorylase
MMFNGYNEELVQAIKGWLQEDVGSGDITTRTTIPAGHESKGIIHAKEDGIICGIPVAELVFEIVDPSLVFTALVQEGQSVSKGTVIAEVEGSTHAILTGERLALNLMQRLSGVASRTASFVQELHGLPTRLVDTRKTTPGHRMLEKYAVRVGGGANHRFGLYDAVMIKDNHIKGAGGIRQAVGRARANIPHTMTIEVETENLEQVEEALVAGADIIMLDNMSPELMKEAVRRIKAKSPHVKTEASGNVSLETVRRIAESGVDVISVGRLTYSFSSLDISLDLNAKKEGPLS
>NZ_CP009241.1|WP_038584425.1|63071_64010_+|quinolinate-synthase-NadA
MEALALERKQEQNRELRVRLEQLKKERNAIILAHYYQRDEIQEVADFRGDSFLLAQKAAETDAEVIVFCGVHFMGESAKILAPNKTVLIPDERAGCPMADMVNVDGLRKLKAQHPNAKVVTYINSSAEIKAETDICCTSANAVKVIESLDAEEIIWVPDKNLGQYVQDQTGKKLIIWEGYCNTHDMLTVKDVVEMKAKYPEAEFVVHPECRPEVVAMGDYVGSTTSILEYCRKSDRRQFIVGTEDGTGYQLRLDSPDKEFHFATKFLVCPNMKVNNLKKLVKCLETMKPQIYVPPAVADKARTSLERMLQVR
>NZ_CP009241.1|WP_038584422.1|60743_62795_+|ATP-dependent-metallopeptidase-FtsH/Yme1/Tma-family-protein
MNRFIRNSGFYLILFLVVVGIVQFVSNGNESADFPRYDELRQELKDNNVKSMTIQFEGNAFAVTGEYREQPSDAKSKNFSTFVPPTDKALDELIGASEVNGVELVTKKMEGDSIWLTFLSSIIPLVIMFILFFFLFNQAQGGGGKVMNFGKSKARLYNEEKKKISFEDVAGADEEKQELVEVVEFLKDPRKFAAVGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGGNEGIIIVAATNRADILDPALLRPGRFDRQITVDRPDVKGREAVLKVHSRNKPLTKDVRLDVIAKRTTGFTGADLENLLNEAALLAARRNRKDITMREVDEAIDRVIVGTEKRSRVISDREKRIVAYHEAGHTIVGYFLEHADMVHKVTIIPRGRAGGYVIMLPKEDRMLVTKQELLDKVTGLLGGRVAEEMFIGEIGTGAYSDFQQATRIVRSMIMEYGMSDKLGPMQFGTSQGQVFLGRDIGHEQNYSDSIAYEIDQEMQNFIRSSYERCRELLTKHSKEMHLIANTLLEKETLELDQIRELIEQGYLTEDGKPEETPGVTHEAGEPVIDSIGDVRVRIQGKDDTSSTIPDLTKDIPNNPESGDGNDSNDGNKDGGGGLV
>NZ_CP009241.1|WP_038584418.1|60093_60633_+|hypoxanthine-phosphoribosyltransferase
MQNDIQEILISEEEIQQRIRELGAQLSAEYAGRTPLVICVLKGAFIFMADLVKVITVPVEMDFMAVSSYGASTKSSGVVKIIKDLDASVEGRDVLIVEDIIDSGLTLSYLIEMLQGRNAASISVVTLFDKPTGRTVNLEAAYTGFVIPDAFVVGYGLDYAELYRNLPYVGVLKPEIYSK
>NZ_CP009241.1|WP_038584415.1|58605_60048_+|tRNA-lysidine(34)-synthetase-TilS
MEQMNELVESVMESADEHGLWAPHDTIVVAVSGGPDSVALLRILHEISVNRIPLNLVCAHVNHGFRAESVEEAEFVRQMAGELGVPFELAEFDIPSLAKGSGLGPEGTAREKRYQFLIETAHRYGARSVALAHHADDQAETVLMRLLRGSGPSGLAGMRWKRTEKKVELIRPFLRINKTALVGLCRDEGFPYAEDASNLLTKYKRNVIRLEVLPSLEKYNPKVKQSLLQLSEIVGAEDEFMEANAAKCFDELVLMKHGKYTFKRALFAAIPSALQRRLIKLILNYLSADSSTLDFSKIEAVRRGTLQEHPTVWSLDLGGGLICVRQYDTILFSSKPPQRKVSYTYRLSLPHSRLLLTEIGKVMTMTVLEKETFLVQGEDYGKMSAWFDSDELVLPLTIRSRLPGDTIRVMGLNGSKKVKDIYIDDKIPSSERSEIPLVCDGLGNIVWIPGVRRSMHAAVGRHTASVLLLSLEDMEQHEEA
>NZ_CP009241.1|WP_144024462.1|57584_58529_+|serine/threonine-protein-kinase
MGMSSNPPYPVGTVISGKWRGNRYVIERMLGRGANGTVYLVQREGRRERYALKIGNDTLELQSEINVLTSLQSCRKRSEFRARRESALSSYLLESDDFKDGEHTPFYVMRYVEGKQLHHFLAKNGISWLGLVGLKLLEKLQTLHECGFVFGDLKPENVMVSDYGEAELIDYGGASPMGRSVKQFTEWHDRGFWNAGSRTGDENYDLFAFAVLCLRLLNEDGLKAAAQQLPQTRSVDELIKLAKSLPDRKLSSWLCLALKGGFPGSAQAAEIWKIHIYGTRKQPKDAMATPRWLKSAFGLSLFVLAFTIYWVLRF
>NZ_CP009241.1|WP_038584440.1|70647_72273_+|anthranilate-synthase-component-I-family-protein
MALEIITAWQDWEQWAQEDWSLLPLIIKSPQDKEGLPSSWMKAWQLASPYSVVLESGKGGRYTYLGLQPVSVLKGKGGDAEVLSLSPEAAGTNEPVPQAVELQGEPLKVLQNWMSGFSSPKLQVAGLPPFRGGCAGFLSYDVVRSLEQLPVLAQDDPGFPDYLFMRLEELWIYDHLENTLYSIVHVPVAAASSSELGALKSLYQDAIVRAEGMVEQWHQICSAPGLGEDRKEERGIIAAVESSADLSGEWPGMTSAFSPGQFQQAVLDVQEYIRQGDVFQVNLSLRQEAQLNSSPEDVYDWLRKLNPSPYMGLLRSPGFALSSASPELLVKLHGDKVSARPIAGTRRRGLTPAEDAAMEAELRGSEKEIAEHIMLVDLERNDIGRVAAYGSVSVPELLTVERYSHVMHLVSQVEGSIAPGKDAYDVMAALFPGGTITGAPKVRTMEIIEELEPVRRGPYTGSLGWIDYNGNMELNIIIRTLAVKDGVGYIQTGAGIVIDSDPYREYRECHNKAKAVVKAVLCSEHQQELRTTGGAEGGAIQ
>NZ_CP009241.1|WP_038584443.1|72269_72851_+|aminodeoxychorismate/anthranilate-synthase-component-II
MILVIDNYDSFTYNLVQYLGELGEEVKVFRNDEISIQEIEALAPDHILISPGPCTPNEAGISLEVLQHFKGIIPIFGVCLGHQAIGQAFGGNVIRAERLMHGKTSPIHHHGTSVFEGLESPFTATRYHSLIVERESLPDCLEITAETAEGEIMALRHKEYPIEGVQFHPESIITDHGHIMLRNFLKRRAGETA
>NZ_CP009241.1|WP_038584445.1|72847_73729_+|4-amino-4-deoxychorismate-lyase
MKYIGLNKSVVEAKDAVVSTLDHGFLYGMGLFETFRTYNGVPFLLRRHLGRLAEGCRQLGIPFEPDEASLRDWITRVMDKNELKDAYIRYTVTAGEDILGLPAGDYNRPNHLLYIKELPRQPAALYSEGKGLQLLQLRRNTPEGPVRLKSLHYMNNILAKRELAGYASAAGGTEGLMLTAEGNIAEGIVSNIFFISNEVLHTPDLATGILPGITREMVLKLAPAAGLRVEEGLYRWEQLQAADEVFLTNSVQEIVPVTTLWHGDEALTVGTGRCGAHTAQLITLYRERTGEPV
>NZ_CP009241.1|WP_038584448.1|73725_74583_+|dihydropteroate-synthase
MRPVIYKRIYRWNNSELVLGDRTLIMGILNVTPDSFSDGGLWNEPDQAVKHALQMAAEGADIIDIGGESTRPGHQPVSLEEELARVLPVIESIHRAAPQLILSIDTYKAEVARQAIRAGAHIINDIWGCKADPDMAAVAAEADCPIILMHNRHDRNYQNLATDMAADLNGSINLALEAGVKPHNIILDPGIGFAKDYAENLQAMMVLDELAMLGYPLLLATSRKKFIRTVLDLPSDDVMEGTAATVAFGIAQGCQIVRVHDVATMKRTVLMCDAMLYAASPRVHE
>NZ_CP009241.1|WP_038584452.1|74631_74994_+|dihydroneopterin-aldolase
MDKMKLHRMEYYGYHGVFEEERKLGQRYYIDLELELDLQGAGLQDDLDQTVNYAEVHALVKKIVETKSFKLIEALAEHIASSVLDTYTIINAVTVKVTKPHPPFDIHFQGVTVELHRTRK
>NZ_CP009241.1|WP_038584455.1|75004_75556_+|2-amino-4-hydroxy-6--hydroxymethyldihydropteridine-diphosphokinase
MTIHSTSEVSEAYIALGANLGDREGTLKEALNRLDHYDGIEVVRCSNVYETEPVGYLDQPQFLNMAAALRTTLAPEDLLHVMLDIEAQLGRVRDIRYGPRTVDLDLLWVEGQSYDTADLTLPHPRMLERAFVLFPLSDIVLLDEDSSGLRGIITAALQDIDGKEGMRLWTSNVWERGSEHSES
>NZ_CP009241.1|WP_038584458.1|75507_75717_+|helix-turn-helix-transcriptional-regulator
MDIKRMGTRVRAFRKLKGYTQQELADSVGISLAVLGAVERGNRHLEDKILNKIADVLEVSVEELANPST
>NZ_CP009241.1|WP_038584461.1|75760_76777_+|tRNA-dihydrouridine-synthase-DusB
MLKIGGIEMKNQVVLAPMAGVCNPAFRLIAKEFGTGLVCAEMVSDKAILHGNSRTREMLFVDEREKPLSLQIFGGDRKSLVEAAKVVDKETNADIIDINMGCPVPKVTKCDAGARWLLNPDKIYEMVSAVVEAVDKPVTVKMRIGWDSEHIFVEENARAVERAGGQAVSVHGRTREQLYTGHADWKYIKMAKEAVSIPVIGNGDVNTPEDARAMLDQTGCDGVMIGRGALGNPWMLYRTIQYLSTGELTPEPGAEEKIKVAILHMDRLVALKGEAVAVREMRKHLAWYLKGLKAAARVKDVIMEETKRDEMVRILNDFVVQLKDEEEQEDRNPSLSAV
>NZ_CP009241.1|WP_038584463.1|76980_77460_+|transcription-elongation-factor-GreA
MSDKEVILTPDGLKRLEEELETLKSVKRREVAERIKVAIGYGDISENSEYEDAKNEQAFIEGRIITLEKMLRNARIINSDEIVTDVVSIGVTVSVEDMEYGDVMEYTIVGTAESDPLNNKISNESPVGRAIIGKKIGTVVDVSVPAGVIQYKILDIRMK
>NZ_CP009241.1|WP_156130789.1|77717_79235_+|lysine--tRNA-ligase
MTEEMNTVETTEKELSELLQIRRAKLDELRALGIDPFGKKYDRTAGAGDLLAKYDGQTKEELDELALEVSIAGRIMAKRVMGKASFAHIQDLSGKIQIYVRQDSIPEAQYAAFNVLDLGDIIGVRGIVFKTKTGETSIKVSNLEVLSKSLLPLPEKYHGLKDVELRYRQRYVDLIINPEVQQTFIARSRIIQSMRRYLDSLGYLEVETPTLHAIAGGAAARPFITYHNTLDMQLYMRIAIELHLKRLIVGGLEKVYEIGRVYRNEGISTRHNPEFTMIELYEAYADYKDIMHLTESMIAHIAQEVLGSQKINYQGQEVDLSPGWRRVTMVDAVKEVTGVDFGVQMTDEEAQRLAKEHRVPVEKHMTFGHILNAFFEQFVEETLIQPTFVMGHPVEISPLAKKNDQDPRFTDRFELFIVAREHANAFSELNDPIDQRQRFEAQIQEKEQGNDEAHEMDDDFIRALEYGMPPTGGLGIGVDRLIMLLTNAASIRDVLLFPHMRNKTE

Crispr_ID: NZ_CP009241_2

• CRISPR_ID: NZ_CP009241_2
• CRISPR_location: 140417-140525
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_2

Consensus_repeat	Method
GGTCGGGGGTTCGATCCCCTCTGCC	CRISPRCasFinder

spacers of NZ_CP009241_2

>2.1|140442|59|NZ_CP009241|CRISPRCasFinder
GCTACCATACAACCCGGAGGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAG

CRISPR arrays and Neighbor proteins around NZ_CP009241_2

CRISPR arrays

The CRISPR arrays of NZ_CP009241_2

>merge|NZ_CP009241|2|140417-140525|CRISPRCasFinder
GGTCGGGGGTTCGATCCCCTCTGCCGCTACCATACAACCCGGAGGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGTCGGGGGTTCGATCCCCTCAGCC

>NZ_CP009241|2|2|140417-140525|CRISPRCasFinder
GGTCGGGGGTTCGATCCCCTCTGCC	GCTACCATACAACCCGGAGGCTTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAG
GGTCGGGGGTTCGATCCCCTCAGCC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038584603.1|146862_147516_+|pyrophosphatase-PpaX	unknown	unknown	gnl|CDD|237336
NZ_CP009241.1|WP_038584606.1|148197_149397_+|acyltransferase	unknown	unknown	gnl|CDD|376607
NZ_CP009241.1|WP_038584584.1|133361_133958_+|recombination-protein-RecR	unknown	unknown	gnl|CDD|234616
NZ_CP009241.1|WP_038584572.1|127658_129017_+|transcription-termination-factor-Rho	unknown	unknown	gnl|CDD|236490
NZ_CP009241.1|WP_038584600.1|145823_146855_+|prolipoprotein-diacylglyceryl-transferase	unknown	unknown	gnl|CDD|183527
NZ_CP009241.1|WP_038584566.1|125163_126018_+|class-II-fructose-1,6-bisphosphate-aldolase	unknown	unknown	gnl|CDD|181501
NZ_CP009241.1|WP_038584581.1|133013_133325_+|YbaB/EbfC-family-nucleoid-associated-protein	unknown	unknown	gnl|CDD|234669
NZ_CP009241.1|WP_038584612.1|150974_152363_-|MBOAT-family-protein	unknown	unknown	gnl|CDD|224610
NZ_CP009241.1|WP_038584594.1|143450_144572_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	unknown	unknown	gnl|CDD|236947
NZ_CP009241.1|WP_038584575.1|129041_130319_+|radical-SAM-protein	unknown	unknown	gnl|CDD|100105
NZ_CP009241.1|WP_038584592.1|142248_143343_+|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|379258
NZ_CP009241.1|WP_038584597.1|144872_145811_+|HPr-kinase/phosphorylase	unknown	unknown	gnl|CDD|235459
NZ_CP009241.1|WP_038584609.1|149497_150937_-|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|377924
NZ_CP009241.1|WP_038584589.1|134482_134749_+|pro-sigmaK-processing-inhibitor-BofA	unknown	unknown	unknown
NZ_CP009241.1|WP_156130790.1|141068_142139_+|FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|223566
NZ_CP009241.1|WP_156130987.1|134253_134451_+|DUF2508-family-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038584569.1|126254_127508_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|183779
NZ_CP009241.1|WP_038598301.1|130436_130634_+|50S-ribosomal-protein-L31	unknown	unknown	gnl|CDD|376487
NZ_CP009241.1|WP_038584578.1|131188_132964_+|DNA-polymerase-III-subunit-gamma/tau	unknown	unknown	gnl|CDD|235505
NZ_CP009241.1|WP_052091737.1|147509_148031_+|acyltransferase	unknown	unknown	gnl|CDD|100053

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038584603.1|146862_147516_+|pyrophosphatase-PpaX	gnl|CDD|237336	PRK13288, PRK13288, pyrophosphatase PpaX; Provisional.	1.04974e-79
NZ_CP009241.1|WP_038584606.1|148197_149397_+|acyltransferase	gnl|CDD|376607	pfam01757, Acyl_transf_3, Acyltransferase family. This family includes a range of acyltransferase enzymes. This domain is found in many as yet uncharacterized C. elegans proteins and it is approximately 300 amino acids long.	2.14986e-19
NZ_CP009241.1|WP_038584584.1|133361_133958_+|recombination-protein-RecR	gnl|CDD|234616	PRK00076, recR, recombination protein RecR; Reviewed.	2.60888e-125
NZ_CP009241.1|WP_038584572.1|127658_129017_+|transcription-termination-factor-Rho	gnl|CDD|236490	PRK09376, rho, transcription termination factor Rho; Provisional.	0
NZ_CP009241.1|WP_038584600.1|145823_146855_+|prolipoprotein-diacylglyceryl-transferase	gnl|CDD|183527	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed.	1.51463e-103
NZ_CP009241.1|WP_038584566.1|125163_126018_+|class-II-fructose-1,6-bisphosphate-aldolase	gnl|CDD|181501	PRK08610, PRK08610, fructose-bisphosphate aldolase; Reviewed.	4.46603e-168
NZ_CP009241.1|WP_038584581.1|133013_133325_+|YbaB/EbfC-family-nucleoid-associated-protein	gnl|CDD|234669	PRK00153, PRK00153, YbaB/EbfC family nucleoid-associated protein.	1.45151e-41
NZ_CP009241.1|WP_038584594.1|143450_144572_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC	gnl|CDD|236947	PRK11650, ugpC, sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC.	1.43809e-179
NZ_CP009241.1|WP_038584575.1|129041_130319_+|radical-SAM-protein	gnl|CDD|100105	cd01335, Radical_SAM, Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. Mechanistically, they share the transfer of a single electron from the iron-sulfur cluster to SAM, which leads to its reductive cleavage to methionine and a 5'-deoxyadenosyl radical, which, in turn, abstracts a hydrogen from the appropriately positioned carbon atom. Depending on the enzyme, SAM is consumed during this process or it is restored and reused. Radical SAM enzymes catalyze steps in metabolism, DNA repair, the biosynthesis of vitamins and coenzymes, and the biosynthesis of many antibiotics. Examples are biotin synthase (BioB), lipoyl synthase (LipA), pyruvate formate-lyase (PFL), coproporphyrinogen oxidase (HemN), lysine 2,3-aminomutase (LAM), anaerobic ribonucleotide reductase (ARR), and MoaA, an enzyme of the biosynthesis of molybdopterin.	5.3492e-11
NZ_CP009241.1|WP_038584592.1|142248_143343_+|helix-turn-helix-domain-containing-protein	gnl|CDD|379258	pfam13556, HTH_30, PucR C-terminal helix-turn-helix domain. This helix-turn-helix domain is often found at the C-terminus of PucR-like transcriptional regulators such as Bacillus subtilis pucR and is likely to be DNA-binding.	4.06169e-16
NZ_CP009241.1|WP_038584597.1|144872_145811_+|HPr-kinase/phosphorylase	gnl|CDD|235459	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional.	6.91416e-170
NZ_CP009241.1|WP_038584609.1|149497_150937_-|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl|CDD|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	3.38189e-09
NZ_CP009241.1|WP_156130790.1|141068_142139_+|FAD-dependent-oxidoreductase	gnl|CDD|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	3.99419e-51
NZ_CP009241.1|WP_038584612.1|150974_152363_-|MBOAT-family-protein	gnl|CDD|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	3.61543e-87
NZ_CP009241.1|WP_038584569.1|126254_127508_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase	gnl|CDD|183779	PRK12830, PRK12830, UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Reviewed.	0
NZ_CP009241.1|WP_038598301.1|130436_130634_+|50S-ribosomal-protein-L31	gnl|CDD|376487	pfam01197, Ribosomal_L31, Ribosomal protein L31.	5.54528e-35
NZ_CP009241.1|WP_038584578.1|131188_132964_+|DNA-polymerase-III-subunit-gamma/tau	gnl|CDD|235505	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated.	0
NZ_CP009241.1|WP_052091737.1|147509_148031_+|acyltransferase	gnl|CDD|100053	cd04647, LbH_MAT_like, Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.	5.51817e-29

Protein sequences

>NZ_CP009241.1|WP_038584589.1|134482_134749_+|pro-sigmaK-processing-inhibitor-BofA
MLRLAAMGVLILSGLLLILIVFRKKLGWAWLSLFGTHLILAALGIYIVNFSGLLTEVYLPLNPATIGAVTILGLPGVLMLLGLKITLF
>NZ_CP009241.1|WP_156130987.1|134253_134451_+|DUF2508-family-protein
MDEHWNVYLEVCKAQAEWQRAYLMFDEALGQDQIDYAIYILEAAERKYQIHLKHAKSLGLNRSLL
>NZ_CP009241.1|WP_038584584.1|133361_133958_+|recombination-protein-RecR
MYYPEPLAKLIEAFTRLPGIGPKTAARLAFHVLNMKEDEVIDFAKALVSVKRNLHYCSVCCNITDTDPCRICQDKTRDTSVICVVQDSKDLVAIERTKEFDGYYHVLQGAISPMEGIGPDDIRLKELLTRLSDERVKELIMATNPNIEGEATAMYISRLVRPFDIKITRIAHGLPVGGDLEYADEVTLSKALEGRREL
>NZ_CP009241.1|WP_038584581.1|133013_133325_+|YbaB/EbfC-family-nucleoid-associated-protein
MNNMNQMMKQVKKMQEQMLKAQEELGSKTIEGSSGGGVVTVQVNGHKKLLSMQIKPEAVDPEDIEMLQDLVITAVNDALTQAEELANNDMGKFTGGMKIPGLF
>NZ_CP009241.1|WP_038584578.1|131188_132964_+|DNA-polymerase-III-subunit-gamma/tau
MEHIALYRAWRPQSFQDMVGQQHIIQTLQNAIREQRVSHAYLFSGPRGTGKTSAAKVLAKAVNCERGPGPEPCNECPSCVRISAGNVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRRKVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHKLPATIISRCQRFDFRRVSLEEQSGRLTEICEKEGITADADALQYIARLSDGGMRDALSILDQISSFTDGNVTYQQVLGMTGGIPSEQFARLATAILEGDMGLLLELVEQLMHEGKSADKCLENLLYYFRDLLMIKMVPGADQLTDRVLNPAEFRDMAAAFSRERLFEIVETLNRYLGEMKYATHPQTLFEVALMKLCSLQQGGGAPILAAAPGSVASLQPSSGSPSVDSGELELLKRQIAALEKKLEQAMQSGGISGNGSRDQASAQKPAQSSAPRISSPSKLPPQLDKFIAGKDSADFASVFKQWSVVLQGVKEEKVTVHAWFVDGEPVSVMEDAVLVAFKNTIHRDTTEKPANRQVIENVLAARLGKPYRLVTILLRDWNEAAQKSAAQPGKEELRLEHEHETAETKTEPWIDEAIQLFGEDLVVIKE
>NZ_CP009241.1|WP_038598301.1|130436_130634_+|50S-ribosomal-protein-L31
MQQAIQPKYNLTKVTCACGNTFESGSVKQELRVEICSNCHPFFTGKQKFLDAGGRVDKFKKKYGI
>NZ_CP009241.1|WP_038584575.1|129041_130319_+|radical-SAM-protein
MYLVYADGQGNVYDHPELYGLARSGDMIVEMLEEELIPLPEGATLVGLPNTRAVGMNPETGEMLPLPEGSQAVGALLPQGFTRLCLPGYVKTDKSYKLPLFGYSAVVWKDGGFYVAAELTDDPEQWNPLNCDRENVEAGVGDLTAKYPENRLYDHLSNCALGYECLTSSNTFLGRWEGAVPVSYSCNAGCFGCISEQPDDSGFVSPQTRMNFRPTVDEISQVMLEHLKTPQSIISFGQGCEGEPSTQAKLIIESIREVRSVTDMGYININTNAGLSDHIRGIVDAGLDLMRVSTISALDDHYNAYYKPRGYTLANVEKSLKYAAAQGVYTSINYLIFPGVTDREEEIEAMVEFVRRTDLKLIQMRNLNIDPESYLELIPPAQGEILGMKTMLEIFREELPGVVIGSFTHVPPADLARAKQRRVHM
>NZ_CP009241.1|WP_038584572.1|127658_129017_+|transcription-termination-factor-Rho
MDLQISDLEEMKLTDLYKLAKKYQIPYYGTLKKRELIFAILRAQAEQSGLMFMEGVLEILPEGYGFLRPINYLPSAEDIYISASQIRKFDLRSGDLVSGKCRTPKENERYFGLLQVNAVNGENPASAAERLHFPALTPLYPQDKLPLETSPTHLSTRIMDLLAPVGLGQRGLIVAPPKAGKTLLLKEIANSISTNNPEIELFVLLIDERPEEVTDMQRSVKGEVVASTFDELPENHIKVAELVLQRALRLVEHKKDVVILLDSITRLARAYNLVVPPSGRTLSGGIDPAAFHRPKRFFGSARNVEEGGSLTILATALIDTGSRMDDIIYEEFKGTGNMELHLDRKLAERRIFPAIDIRRSGTRREEVLLSKEELDTIWAIRKNMNESYDFVEGFIKKLRDTKTNAEFLASFDVAGSKEGSSASGTASNGGTSNSGSSARRTTRPKTPTVPTT
>NZ_CP009241.1|WP_038584569.1|126254_127508_+|UDP-N-acetylglucosamine-1-carboxyvinyltransferase
MEKLMIGGGRPLEGVVTISGAKNSAIALIPAAILAESEVVLDNLPSLSDVAVYSEILEELGATVSWSGNQMRIDPSRIVSIPMPNGPVKKLRASYYMMGALLGRFKEATIGLPGGCNFEPRPIDQHIKGFEALGATVTNDHGSIHLYAKELRGAKIYLDVSSVGATINIMLAASRAKGSTIIENAAKEPEIIDVATLLNSMGAVIKGAGTETIRIEGVTEMHGCRHSIIPDRIQAGTYMIAAAATRGNVLIDNVIPKHLEALTAKLLEMGVEIEELDESIRVIGRARYEHVDVKALVYPGFATDLQSPMTSILTQAEGVSVLSDFVYSNRFKHVPELVRMGAKIRVEGRSAIIEGGKLNAAKVKAADLRAGAALVIAGLTVQEGITEVTGVEYIDRGYDNLVSNLRNLGAEVWRENE
>NZ_CP009241.1|WP_038584566.1|125163_126018_+|class-II-fructose-1,6-bisphosphate-aldolase
MPLVSMTDMLNKALEGKYAVGQFNINNLEWTQAILGAAEEEKSPVILGVSEGAARHMGGFYTVVKMVEGLVHDMKITVPVAIHLDHGSSFDKCKEAIDAGFTSVMIDGSHHPISENIEMTKKVVDYAHAKGVSVEAEVGTVGGQEDDVIGGIQYADLNECVSIVKETGIDTLAPALGSVHGPYHGEPNLGFKEMEEIRNAVKLPLVLHGGTGIPEHDIKKSISLGTSKINVNTENQIAFAKVVREVLAAKPDAYDPRTFIAPGRDAIKQTVIGKIREFGSSNKA
>NZ_CP009241.1|WP_156130790.1|141068_142139_+|FAD-dependent-oxidoreductase
MLSSYRMKMKLLTASLKFLSPFNYKFITLSRNEGIPVIYDAIIVGGGFAGLQAAIQLGRYSTHHVLVIDAGGGRSNICRNYHNILGWPEGISGEELRARGRRQAEVAGVEFATDRITKAEKQNGLFQLNGSKNQCYSSKTLLLATGVMDRFPKLPGLAATLGKTVYVCPDCDGYEIQDRQTLLLGSGDVGANMAFILRERTGDLTYINHECQPVSAENRQRLEEQGILYVEEAVARIDEENDGIIKAVILESRITLLAERGFIAFGNNAVHSELAAELGVKLHKNRHIEADNRSLMTNVEHLWVAGDVAVHAEQATVAMGEGAIAGIWMHKELKKISPVSLPPSKQNHSEMVKQNK
>NZ_CP009241.1|WP_038584592.1|142248_143343_+|helix-turn-helix-domain-containing-protein
MDSEALRQKLEQLTGKRTGIKQLGRQHSASLFGIGKEELDQPVTHEGHLWVPLYENEGRITAIWVEMDGLSALELQLVNYAARNFAVALKATGLKEEGEVEARQLSNWLNSQLEQEKNDAEIPDEITLKGRLFGEMIPFLLVSENVHNPQISYRSLMKLLRNYFENEILLIPLQEKEWLILARKELLTGGDDKDDEEESVDELLSQTCMGLHELIASEWVGVFHLAVAPAIIPVKGLTGSVALLRETIVLGRIFQVGDYIHLPWELHMERLVNSIPDERRRQLLGQIGDYTSVLADKEMLLTLETFFEMDCNVSETAKKLYIHRNTLLYRLDKIKQETGADVRSFGDAAIVKLTMLLYKVTKRK
>NZ_CP009241.1|WP_038584594.1|143450_144572_+|sn-glycerol-3-phosphate-ABC-transporter-ATP-binding-protein-UgpC
MAGVRLEHIFKKYPGSDKATVIDINLDIKDKEFLVLVGPSGCGKSTTLRMIAGLEEISEGKMYIGDRVVNDVAPKDRDIAMVFQSYALYPHMSVYQNMAFGLKLRKVKKEEIDKKVREAAKILDIEHLLERKPKALSGGQRQRVALGRAIVRDPQVFLMDEPLSNLDAKLRGQMRAEITKLVKRLETTCIYVTHDQTEAMTMGDRIVVMYDGIIQQAASPEELYNEPTNLFVAGFIGSPTMNFINGTLSDVGGAVRFRAENLDVEVPGGKATILRSKGYIGKEVIMGVRPEDIHEEPVFLEASPNTIFTSLVDVTENLGHEMLLYLSGLGSNTVIARVDGRSTTREGSKPKLAIDMNKIHIFDKESELNVLLG
>NZ_CP009241.1|WP_038584597.1|144872_145811_+|HPr-kinase/phosphorylase
MAKKVKVSELVQHFQLEVVSGHEGLKRPITVDDLNRPGLEIAGYFEYYPEERVQLLGKTELAFFSMLSEEERKSRIRGICKDNTPCIVITRALDVPQELIDISNEKGLPVLRSSMATTIFSSRLTSFLEGRLAPTATIHGVLCDVYGVGMLITGSSGIGKSETALELVKRGHRLIADDAVEIRQTSDNQLHGTAPELIRHLLEIRGVGIINVMTLFGAGAIRNHKRITLVVRLEAWQQDKQYDRLGLDEETTRIIDTDVPLVTIPVRPGRNLAVIIEVAAMNYRLKQMGFNAALQFTNKLTATISEDMDDLD
>NZ_CP009241.1|WP_038584600.1|145823_146855_+|prolipoprotein-diacylglyceryl-transferase
MFFSLAINPIVFSIGSLPVHWYGLILGFGALAGLFLAIQEGKRFNISQEFFMDMLLLGVPSAIIGARIYFVAFKWEDYKDNFIDVFKIWNGGIAIYGALIGAIICAIIYFRYKGYPFWRVVDICAPGLLAGQMIGRWGNFINQEAYGGVVEESFLRDKLHLPDFIVNQMYIENAFHHPTFLYESLWSLLGILLLMVLRRQRFVRAGEIFLSYFIWYSIGRFFIEALRTDSLGFNGSSGVASFVNGLWSPMKWLGFEQGYFDPAYGNIRISQLLALLIIVAAVVLIIVRRVTGQSKAHYSDPIVSTKPVAADSVVPENAVNTPQKAPQAAPPDKVKSEDAEPKE
>NZ_CP009241.1|WP_038584603.1|146862_147516_+|pyrophosphatase-PpaX
MIECVLFDLDGTIVNTNELIIGSFMHALKENNLPSLTREQIIPHMGTTLHQQLSAFSGLEDTSVLEKSYRSYNYAHHDELIGSFPRVNETMEELSRRGIRMGIVTTKIRPTTLKALEMFDLLKYMETIVTVTDVTQPKPHPEPVLTAIRNLEVDPQHTLMVGDSIVDIQSAKAAGVPVAAVAWSLKGEETLRKYEPDYIIHDMTDLYEIVRQGTKES
>NZ_CP009241.1|WP_052091737.1|147509_148031_+|acyltransferase
MVRNLTRYPVEGHNSLWYIYRTVSPWKGVRNFIFIQIARYCPILPLKNWIYRRILGMKVGKHTAFGLMAMVDVFFPEKITVGENSIIGYNTTILAHEYLIKEYRLGEVIIGENVLIGANTTILPGVTIGDGAVVAAGSVVHKHVAAGSFVGGNPLRELRPGDSSDRLDRTEDL
>NZ_CP009241.1|WP_038584606.1|148197_149397_+|acyltransferase
MNSIKKERLPQLDIFRALAILGVLHVHATSFAAGEQALQSPYYVWINGVNIFFRFGTPCFIFLSSFVLFYNYYGRPVTRGLMLNFYRRRLTYILLPYLLASIGYHLMVLYINGQLLDDPLTNLSSFMYALITGSAYTHLYFVFISIQFYLVFPLILQLMQKSKKMVTWAILIGLIIQWAFVFLNKYQLQLVDKASYAPTYMAYYMMGAYLAIHFDKIKPWLERPFKEWSNTQTGETIVLWGSWLAAAFIQIHLWYQGRHFGHWVNSLWYELLWNVHSMLSALVLLHATFLIYRTASRGVNAFMTRLGEISFAVYLLHPLILVLYRRFRYNIPLDSLAYVLFVHGGLIVALGVSWMVVQISFRRTRWSWIAFGSVPRSLAPQPKREPDAVLTLDNSHGKA
>NZ_CP009241.1|WP_038584609.1|149497_150937_-|copper-amine-oxidase-N-terminal-domain-containing-protein
MRHKKTKYKKFIFQFITMVIAFAVLIGTFSYIVDPLQFYRKASFYTPKLSWQERYQNPGLARNYKYDTIVLGSSMTENFLPSDVGEKLKGDVLKLSIEGSTIGEQYQTAKVAFKTGQVRQVLWGIDYFAFRTNNATGNEEFPAYLYDSNPLNDYKYVFNETNIKSALTALSKSEGRANLKLSSLELLYNWDKSVTYGRDLVIKNWQSARNKEVAYGNNEDPLDSVKQTFDENVVSIVKAHPETKFYFYYPPYSILRQQVWYKTNPERYGNQLEMKRYMFDKLNSYSNVSIYEFQTDSDITYNLDLYKDLSHHSGAVNSIIVDGISKGTHLVTADNLEQGIQLLKRQAENVIVNTEEGTVYSIDLSLNGEPQSFGFLPPTTGDVIMAPLKLYAQMLGIAFDYDIDKKLITLAKGDSVAELTVGSDEALLDGQTVKLAAPVENKIGIMAAPLESIPALFGGSVTLGQEKDKLLEVDITFGE
>NZ_CP009241.1|WP_038584612.1|150974_152363_-|MBOAT-family-protein
MLFNSYEFIFIFMPVTVIVYFLLNRFRLIYASKLWLALSSLFFYCWWDVRYLPLLLGSIAFNYFMGRTISHMQNATERKRKLALAFAIIMNLLLLIYYKYADFFIGNVNALFDTDVPLLKIVLPLGISFFTFTQIAYLVDAYRGKAKEYNVISYVLFVTFYPHLIAGPILHHKEMMPQFDRLRGKRFDYSNVAKGLFLLSIGLFKKVVIADSFAPVASNGFDVLSQLNFIQAWTTSLSYTLQLYYDFSGYSDMAIGVALLFNIILPINFNSPYKSLNIQDFWRRWHMTLSRFLREYIYFPLGGSRKGTTRTHINSMLTMLIGGLWHGAGWTFVFWGFMHGFAQFIHRIWQKANIKLPKWVAWFITFQFINLTWVFFRATSWDNAIKVLKGMVGLNGIGIASLDKTIVLGLAVFMIVAVLCRNSMQMLEGFKPGWKTAVFAAALFCIAVVYFNKISEFLYFSF

Crispr_ID: NZ_CP009241_3

• CRISPR_ID: NZ_CP009241_3
• CRISPR_location: 260431-260799
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 7 spacers

Consensus repeat of NZ_CP009241_3

Consensus_repeat	Method
CCAACGGCAGAACCNACG	CRT

spacers of NZ_CP009241_3

>3.1|260449|54|NZ_CP009241|CRT
GCGACGCCAACGGCAGAACCGACGGCCACGCCAACGGCAGAACCAACAGCAACG
>3.2|260521|54|NZ_CP009241|CRT
GCAACGCCAACGGCAGAGCCGACAGCTACGCCAACGGCAGAACCGATAGCAACG
>3.3|260593|30|NZ_CP009241|CRT
GCGACGCCAACGGTAGAACCGACAGCTACG
>3.4|260641|18|NZ_CP009241|CRT
GCTACGCCAACGGCAGAA
>3.5|260677|18|NZ_CP009241|CRT
GCAGAACCGACAGCTACG
>3.6|260713|18|NZ_CP009241|CRT
GCCACGCCAACGGTAGAA
>3.7|260749|33|NZ_CP009241|CRT
GCAGAACCAACGGCTACGCCAACACCGGCCACG

CRISPR arrays and Neighbor proteins around NZ_CP009241_3

CRISPR arrays

The CRISPR arrays of NZ_CP009241_3

>merge|NZ_CP009241|3|260431-260799|CRT
CCAACGGCAGAACCGACGGCGACGCCAACGGCAGAACCGACGGCCACGCCAACGGCAGAACCAACAGCAACGCCAACGGCAGAACCGACAGCAACGCCAACGGCAGAGCCGACAGCTACGCCAACGGCAGAACCGATAGCAACGCCAACGGTAGAACCGACGGCGACGCCAACGGTAGAACCGACAGCTACGCCAACGGCAGAACCAACGGCTACGCCAACGGCAGAACCAACGGCAACGCCAACGGCAGAACCGACAGCTACGCCAACGGCAGAACCGACGGCCACGCCAACGGTAGAACCAACGGCAGAACCAACGGCAGAACCAACGGCTACGCCAACACCGGCCACGCCAACAGCTGAACCGGCG

>NZ_CP009241|3|1|260431-260799|CRT
CCAACGGCAGAACCGACG	GCGACGCCAACGGCAGAACCGACGGCCACGCCAACGGCAGAACCAACAGCAACG
CCAACGGCAGAACCGACA	GCAACGCCAACGGCAGAGCCGACAGCTACGCCAACGGCAGAACCGATAGCAACG
CCAACGGTAGAACCGACG	GCGACGCCAACGGTAGAACCGACAGCTACG
CCAACGGCAGAACCAACG	GCTACGCCAACGGCAGAA
CCAACGGCAACGCCAACG	GCAGAACCGACAGCTACG
CCAACGGCAGAACCGACG	GCCACGCCAACGGTAGAA
CCAACGGCAGAACCAACG	GCAGAACCAACGGCTACGCCAACACCGGCCACG
CCAACAGCTGAACCGGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038584833.1|254703_255609_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|132997
NZ_CP009241.1|WP_038584848.1|268473_270099_-|response-regulator	unknown	unknown	gnl|CDD|227095
NZ_CP009241.1|WP_052091744.1|245727_246585_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP009241.1|WP_038584826.1|250953_252489_-|sugar-isomerase	unknown	unknown	gnl|CDD|240533
NZ_CP009241.1|WP_038584821.1|247963_249055_+|threonine-aldolase	unknown	unknown	gnl|CDD|224919
NZ_CP009241.1|WP_038584831.1|253617_254673_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|132997
NZ_CP009241.1|WP_052091746.1|266367_267636_+|hypothetical-protein	unknown	unknown	gnl|CDD|225306
NZ_CP009241.1|WP_038584816.1|244852_245731_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP009241.1|WP_038584828.1|252478_253621_-|polysaccharide-pyruvyl-transferase-family-protein	unknown	unknown	gnl|CDD|377253
NZ_CP009241.1|WP_038584845.1|267745_268468_+|hypothetical-protein	unknown	unknown	gnl|CDD|235109
NZ_CP009241.1|WP_038584851.1|272075_273542_+|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP009241.1|WP_081965643.1|270073_271969_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP009241.1|WP_038584813.1|243408_244797_-|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP009241.1|WP_038584844.1|264988_266122_+|alanine-dehydrogenase	unknown	unknown	gnl|CDD|240630
NZ_CP009241.1|WP_052091745.1|249213_250530_-|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|132997
NZ_CP009241.1|WP_038584839.1|262355_263231_-|aldose-1-epimerase-family-protein	unknown	unknown	gnl|CDD|185701
NZ_CP009241.1|WP_038584842.1|263446_264673_+|Zn-dependent-hydrolase	unknown	unknown	gnl|CDD|236456
NZ_CP009241.1|WP_052091747.1|273942_276048_+|collagen-like-protein	unknown	unknown	gnl|CDD|236140
NZ_CP009241.1|WP_052092411.1|276349_277246_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP009241.1|WP_038584819.1|247129_247771_-|uridine-kinase	unknown	unknown	gnl|CDD|235492

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038584833.1|254703_255609_-|glycosyltransferase-family-2-protein	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	7.95025e-20
NZ_CP009241.1|WP_038584848.1|268473_270099_-|response-regulator	gnl|CDD|227095	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms].	3.0857e-61
NZ_CP009241.1|WP_052091744.1|245727_246585_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.71846e-90
NZ_CP009241.1|WP_038584826.1|250953_252489_-|sugar-isomerase	gnl|CDD|240533	cd13128, MATE_Wzx_like, Wzx, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins. Escherichia coli Wzx and related proteins from other gram-negative bacteria are thought to act as flippases, assisting in the membrane translocation of lipopolysaccharides including those containing O-antigens. Proteins from the MATE family are involved in exporting metabolites across the cell membrane and are often responsible for multidrug resistance (MDR).	1.15322e-05
NZ_CP009241.1|WP_038584821.1|247963_249055_+|threonine-aldolase	gnl|CDD|224919	COG2008, GLY1, Threonine aldolase [Amino acid transport and metabolism].	6.70771e-60
NZ_CP009241.1|WP_038584831.1|253617_254673_-|glycosyltransferase-family-2-protein	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	3.35519e-30
NZ_CP009241.1|WP_052091746.1|266367_267636_+|hypothetical-protein	gnl|CDD|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	3.35183e-22
NZ_CP009241.1|WP_038584816.1|244852_245731_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.70062e-84
NZ_CP009241.1|WP_038584828.1|252478_253621_-|polysaccharide-pyruvyl-transferase-family-protein	gnl|CDD|377253	pfam04230, PS_pyruv_trans, Polysaccharide pyruvyl transferase. Pyruvyl-transferases involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora.	2.99811e-27
NZ_CP009241.1|WP_038584845.1|267745_268468_+|hypothetical-protein	gnl|CDD|235109	PRK03187, tgl, transglutaminase; Provisional.	7.1525e-106
NZ_CP009241.1|WP_038584851.1|272075_273542_+|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.85441e-39
NZ_CP009241.1|WP_081965643.1|270073_271969_-|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.79474e-59
NZ_CP009241.1|WP_038584813.1|243408_244797_-|sugar-ABC-transporter-substrate-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.0861e-72
NZ_CP009241.1|WP_038584844.1|264988_266122_+|alanine-dehydrogenase	gnl|CDD|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	0
NZ_CP009241.1|WP_052091745.1|249213_250530_-|glycosyltransferase-family-2-protein	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	7.15496e-28
NZ_CP009241.1|WP_038584839.1|262355_263231_-|aldose-1-epimerase-family-protein	gnl|CDD|185701	cd09024, Aldose_epim_lacX, Aldose 1-epimerase, similar to Lactococcus lactis lacX. Proteins similar to Lactococcus lactis lacX are uncharacterized members of aldose-1-epimerase superfamily. Aldose 1-epimerases or mutarotases are key enzymes of carbohydrate metabolism, catalyzing the interconversion of the alpha- and beta-anomers of hexose sugars such as glucose and galactose. This interconversion is an important step that allows anomer specific metabolic conversion of sugars. Studies of the catalytic mechanism of the best known member of the family, galactose mutarotase, have shown a glutamate and a histidine residue to be critical for catalysis; the glutamate serves as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen.	5.16124e-132
NZ_CP009241.1|WP_038584842.1|263446_264673_+|Zn-dependent-hydrolase	gnl|CDD|236456	PRK09290, PRK09290, allantoate amidohydrolase; Reviewed.	0
NZ_CP009241.1|WP_052091747.1|273942_276048_+|collagen-like-protein	gnl|CDD|236140	PRK08026, PRK08026, FliC/FljB family flagellin.	3.00007e-05
NZ_CP009241.1|WP_052092411.1|276349_277246_+|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.87915e-119
NZ_CP009241.1|WP_038584819.1|247129_247771_-|uridine-kinase	gnl|CDD|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	3.13829e-113

Protein sequences

>NZ_CP009241.1|WP_038584833.1|254703_255609_-|glycosyltransferase-family-2-protein
MQGLSVAICTRNRVQDLTRCIHSITKQSIGRTYPIEVIIIDDGEIPEGTLKGFEALLAGCGYPLLYHSKTERGLWLSRIKAVELSTMDKILFLDDDVEIPDHYLATLIQTYLDHPNCAGVGGVAIGMRNSFLGTIRCLLSFQQSLSSGKLSLSGQAGSMYNWHKARKIFKTEFQHGCNMSFKKEAIQDLKPVPWLQSYSVGEDILMSRIAQGSGPLYINPELKLLHHESPASRDNLENVAYMRVLNHVHLLKDKRSGPVGYLALVWTTLYLILREQPKKNTAAISGYKKGLREIFSRQTAG
>NZ_CP009241.1|WP_038584831.1|253617_254673_-|glycosyltransferase-family-2-protein
MSVSIVVPMYNLERYLTPLLLSLLEQSGKRFELIMVDDGSTDRTYEVAADFLEKHPDLRSKLIRTPNSGVSAARNTGLASATGDYVLFLDGDDYADSSLVLSIEGATRTTDPDVVCWGYNLVREDQSTIVSFTSGQSDTTGSEALQNIFVHKSLRIWTGSIAFKRSFLLENDIRYTERCVNGEDQEFIYKALSRASRVISIPDVLSYYVQRTSSITGTYNVNKFDVVAAFKRVDEYFKAHPFSEASTISELLLTREMTENYFYNLKTCLNGTSGIRMRDLLHDIEKTYPHLNHEMLLIMKRYSGDDRQLAFRIKAFLISPPLYARLIHMDRSWLQFKHKLKTMITRKEIKI
>NZ_CP009241.1|WP_038584828.1|252478_253621_-|polysaccharide-pyruvyl-transferase-family-protein
MKKMMISAYTEFNLGDDLFIKVLCERYPDTRFMIIAPRLYKLVFKDIKNLKVYASDSVLFRGINYVFRKLKLHNNFLQRFLGDQSDGTVHIGGSIFMQGEHWAEYVANAEAMRNKSKPYYLMGANFGPFTDDEYYQVHRRIFPEYTDVSFREQYSYDLFKDLGNVRMAPDIIFQLKYNANETSSGQKPPAGQTIAISVIKPSSKNLSGFDNLYYEKMNDVAIYFIKQGYAVHFMSFCQHEGDQEAIGQIIGLIPAEFQEQTHVHLYKTNIDDILAALAGASCIVASRFHAMILGWVFDKPVFPVAYSSKMVNVMQDAYFTGKYTDFAHLAELTPEEVYDSMATNRLDVTLQANQAEKHFEQLDAYLSPAPLMEGRRSYES
>NZ_CP009241.1|WP_038584826.1|250953_252489_-|sugar-isomerase
MKAKRSLLNLGFGLTSQVITIILGFFIPRLIMVNYGSEANGLIASIVQIISYFALLEAGVGAASLQALYKPIANNDRGHINSILAATSSYYKKTGMYYFISVVLLAVIYPLVIHSEINKVSIMAIILFSGLGGAINYYFQGKFRILLIAEGKSYVETSIVTIANILNNVVRIILLLQGVNIIAVQASFFVLTLLQIVAFYFYSKKYYKWIDLSHKPDFAAIGQKNSVMVHEISYLIFRNTDVLILTIFTNLKIVSIYVMYNMIFTIVDNIVQTVNGSIKAALGQSYHEGKEAFVKFYDAYEVYFMGLIFAILTVVYIIILPFMKLYTAGVNDVNYINAWLPVLFVVIKLLTNARTTSNNIITIAGHFRNTQFRSIMESAINLGASIIFVIFFGIYGVLMGTIAALLYRSIDIVVYASRVLLERSPWITFRRWLTNVAVFAAIVFVTTKLNLSITSYTGVILWAVLLGIIILPIYFLVGSLMEREVFLYTWGYLKGFRTKLKLKRKVTAGQA
>NZ_CP009241.1|WP_052091745.1|249213_250530_-|glycosyltransferase-family-2-protein
MDHSEELQQAGYRLLHQLHDDIQHFSAEELSREAIVRRGREISSKESAPAIQEHLATLAEVIEAYLAGRASEDALEYYLLRQFHIELNTIEGLLTQLARLSSGTGETENLLPESADPAVYPKVSVIITTYNRKDFLHQAIQSILRQDYPHKEITVIDDCSSDGTGEMMHTNFGGDPRVIFMQNETNSGPGNNRRKAFAAHGDGEYILFLDDDDYLIDSSYLSRAVNFHLTHPEASFVAANVFLEYSKSRKLTISSLQLASITGKKDYFMNFEQKGYPKPASTLTTVFKREALMSMDILSMNMVNDASIYLRALLIGDAGFIDCLAGVYRIHGNNITFHLSQSFLIENLEEKRLIRNMAIERYGYNKQEMNEWFNHNVYDTISYYLMNSAKSHTDFKFMYNWASSHSPKAYSQLKRQFRTKLMKKQLLRVSFVRSLLNR
>NZ_CP009241.1|WP_038584821.1|247963_249055_+|threonine-aldolase
MSETKSLLEAFNATAMKLAGHGKREIEVLKEAFAGVDGQTDSDIYGGGGLIEDFQAEMAEVLGKETAVFFPSGTMAQQIALRIWCDRKGMKTVAYHPLCHLEIHEQDGLKELHHIEPLLLADKDSLITLDDVKNIGKDIACLLLELPQREIGGQLPEYAELEAISAYCRGQGIILHLDGARLFEVLPYYGKTAAEVCSLFDSVYISFYKGIGGIAGAILAGSREFTEESKIWKRRHGGDLVSLYPYIVPAQYYYRQRAGKMGQYYEEAKELAALLGGCHKVSTLPQQPVSNMFHVHFAMAKEQLEPILVTVYEQTGVGLTASLRETGETSCFFEMHIGDRYGSIPKAELGAAVELLDQLIKQA
>NZ_CP009241.1|WP_038584819.1|247129_247771_-|uridine-kinase
MLIIGIAGGTGSGKTTVARSVIDRLGTDKVTFISQDNYYKDHSYLSMAERGAINYDHPLAFDTELLIEHLDCLKAGQAAYAPVYDFTVHARSTDKTVELAPNNIVILEGLHVLSDEKLREQLNIKVFVDTDPDVRILRRVLRDIEERGRTIRSIHTQYLTTVKPMHEAFIEPSKKYADLIIPEGGQNQVGIELLSVLTEKYLSGDEQWNGNTR
>NZ_CP009241.1|WP_052091744.1|245727_246585_-|sugar-ABC-transporter-permease
MYLFISPWLIGFLVFALYPIISSLYYSFTDYDIIHPPRFIGLANYTEMFHNDLFWKSVTVTLRYTFISVPVQMLLALGFALLLHQTIPLRGFFRTAMYFPSMVSGVAMSLLWYWIFNPQIGLFNYMLSWFGIHGPAWLMSPDTALYALIIMSFWTAGSGMILFLAGLQGVPSSLIEAARLDGAGRFRIFKNITLPMISPVLLFQLIMGLIDSFQVFTQAFVMTQGGPNYSTWFYVYNLYNTAFKEYRAGYSSALAWVLLIVVLVFTAIIMKLSNRYVHYEGGERR
>NZ_CP009241.1|WP_038584816.1|244852_245731_-|carbohydrate-ABC-transporter-permease
MSTVKATSPRVPTSHSRRKADPVKIASFITLLITTFLMLLPLFFMVSTSLKSKREMLKFPPTFLPESWAWSNYTEIFDTLQFGTLYKNSLIIAGLTVIGTLLSSALVAYGFARYRGRGNQLWFALLLSTMMLPYPAIMIPQFVLFSKMNWIDTFLPLVVPAFFGSAYNIFLLRQFFSTLPEELFDAGRIDGCGELKMWRTIALPLSAPALATVAIFAFIYSWNDLLTPVLYLSSSDKFTLPVGMASLTSSRFRIPPWHLLMVASVLAMVPIVTLFAVAQKQFVEGIVLTGIK
>NZ_CP009241.1|WP_038584813.1|243408_244797_-|sugar-ABC-transporter-substrate-binding-protein
MKRNSTRKSFALLLAASMALMVMLSGCGGGKSASNVAPGNKNTGDSGGSEKQVTITHYTIDSEDRTFIEKLIPDFEKEHPNIKVKVEKAPYEQFDSKLQTLIAGGKSPDVTSHYGYGGFAEYYNKDMLLDLTDLIAEEGFKAGDYHIPDNLMKIYTVNNRTYGIPVNMYVTLMLYNKDMFDAAKLSYPPSDYEDKSWTFEKMVEEAKKMTLISDDIAKTQYGVDFTWAERDMRPLYFGAEPYSEDTWTNGGVPSETHFDSPEVIAAYQKLFDLIFKDKVSPNSEWSKSVAGQNGDPFVAGKIGMSIGGSWNLAGANDFPFNIGVAAVPWGGNDKVRSTLFVDPLMILKDSEHPKEAFEWIQFLLTTEVQEKSIELSGGNPPVNTEAAEAYYKHFDGIDPEDVKKVYEGAVKYGYESYNHLITKYSQINDMFINELQPVETGHKTLEEVMPVIQKKVTEIIKR
>NZ_CP009241.1|WP_038584839.1|262355_263231_-|aldose-1-epimerase-family-protein
MNTILRSGSAQAEISTLGAELVSFTRKDTGTEYIWSGDAAYWTGRSPVLFPIIGAVRNGEIKVGGQVYKLANHGFARRSEFTVVEADESRAVFLLTSSEHTLSSYPFQFNLYITYTLNDSTLKLDYRVENIDGGNISFQLGTHPAFNCPLDQNGSLSDYVLEFSEAENLDREFLNDAGLRISGKSEPVLREERSLPLSHEMFKDGALIFQNVTSRQISLKSRLTGKSVAVSFEGFPDLGIWQPLNAPFVCIEPWQGFADRDVFEGELSEKEGIVTLSPGEHFASSLTIEIN
>NZ_CP009241.1|WP_038584842.1|263446_264673_+|Zn-dependent-hydrolase
MQLKQIFVNGERLKDTIEAFADFGRTDSNGVTRLSLSEQDVKVRNYFAACCEELGMSVKVDDMGNMYATLAGTEAGPPVVIGSHLDTVKKGGRFDGVLGVIAGLEVVRTLVDHGIKPRLPVTVMNFTNEEGARFEPSMMASGVLSGKFGKTEMLKKKDPEGVTFGEALEASSYAGEAANRIKEAAAYLELHIEQGPVLERENLAIGLVDCVVGMACYEIEVTGESDHAGTTPMDMRKDALFAATDLIAELRSKLGVLDSELVYTMGRMNVLPNIHTVIPNKVIFTVEARHKDMDIVREVEHIIGGLPEELLECSVSKTKLWGRDTVWFDPEICALTQQAASRLGYSSKKMASGAGHDAQFVAGFLPSAMIFVPSVNGKSHCEEELTSYEDCEKGVNVVLETVLAVLSK
>NZ_CP009241.1|WP_038584844.1|264988_266122_+|alanine-dehydrogenase
MIIGVPKEIKNNENRVAITPAGVVSLVAEGHKVLVEAGAGAGSGFLNEEYASAGAELITEASAVWAAAEMVMKVKEPLESEYGYFRPGLILFTYLHLAPEPSLAAALKDRGVFAIGYETVVHERTLPLLTPMSEVAGRMSVQLGAQFLQKNYGGQGILLSGVPGVSRGKVSIIGGGVVGTNAAKMAIGLGAEVTIVDLSADRLRQLDDIFGAQINTLISNPYNIAKAVAEADLLVGAVLIPGAKAPKLVTEEMVKSMKVGSVIVDVAIDQGGIVETIDRVTTHDNPVFEKYGVLHYSVANMPGAVAKTSTIALTNVTVPYALQIANKGVFQAIEDDAGLKSGVNVANGKITCQAVAEALGEEYFTVEKALEQEFTLI
>NZ_CP009241.1|WP_052091746.1|266367_267636_+|hypothetical-protein
MTDSEPIFDRFFDSMESLADTLSESLQSQVTIEDSNHHVIGYSSHEFESDPARISTIIGKRVPNTVIIGLRKKGVMHQLENAAHPIRIPAVMEVGLGPRLAMCIKHQQEILGYIWVVDRGNLASGHAESIVEKAAGIAGRYLLKQRGWKMKQDKTHEDFFWKLLTSHYENEPRIRQEAENGSILLPESYYIGVLESNRVIDEHFLLRFRQMMDTYAGQRLLFLTAEQNRLIILFSFLFPVEGTERLASFVHKLIRDMGKSESCTLAAGCSPGYREYTSAAVAYREALSILELKKLLPYHARELLLYEEIGFWAYIPAIMEQKRSMTRRSALLYPLKEHDREHKSDFLKTIAVYLSLNGNLKASAAFLHIHTNTLMYRLNRIAEITGKSLKETDYRTSIYLDILTEETARVNRWFLEEAGSSE
>NZ_CP009241.1|WP_038584845.1|267745_268468_+|hypothetical-protein
MGIGYGPGDPSFERSMRAGIIAAAESMNDGGTDFSNFKNSRCNPRYWTRTDNGGFQLKEGVAPSAAINDIFENGSLYAFECAMAMVMILYKATIGAIGDAAFDRHFGDIFLWDWNYDSNLQMITTFEKSDMLPGDVVYFKNPDHNPDKPEWQGENAIMLGDDRYYGHGLGIKSSAQMIAALNRHRVPGSRISAYFTDEALHPNFAYISGLAMRAAVPTPENKGARNTIFSRIGVKSYIYK
>NZ_CP009241.1|WP_038584848.1|268473_270099_-|response-regulator
MLTMIIADDEPFIRRSLIHGFKWQEEFGLEVIGEAADGEEAYELCMKHTPDILFTDIMMPFLNGLQVAEKLKAAGCPTKIIIISGAQDFSYAQSAMKVNAEGYILKPVKLGEVKDIFHKVIARIHHERDNQLNLNQLKKQLHDNMPLIREKFLQNLIAGLYRNEGEIWEKIDYFALPFKREDPLTVGVLQLDDYGAAVDKFTEEYKQLLYFSIQNIMSECLNSHPCGIGFVASENEFIMIFCPGEEPASDSISSLCEQIIASIKEYLRLDASIGIGRTCMLAGQIENSYKDALAALAYKFYTGHASILHIKDIQPDTETLQSTFFYKFHAQLMNELKAGHTDKVMELLETLFTMLEGPKLQIGYVQSICAEIIFTSARALYEIDEEIERVLNDRITIMDTLYIQKNIAGLKSYILSLFHDLSAYVAGKNTSKNSRAINKIRSIVQEGYAQELSISRIAEEVFLTPNYISLIFKKETGETITDYITKIRMSKAKELLQTTDLKVMEISERVGYENPHYFSTVFKKTVGVHPLKYRSDQEETP
>NZ_CP009241.1|WP_081965643.1|270073_271969_-|sensor-histidine-kinase
MASKEYSQGQRRIQMKKLFDTLSKTLFLYNFSIRSRLILYFLFLVLLPTTIISITVYNKSADIITRNVNTSIENNLNLVQDNLAQRFESANNSMVSLYLNTEFADLISSNRPTDSTGIINELAALNKMLENFPANGTSGSSFVPMLYMLNRPEYTQYNFSRRVFNIDQISLKPWYLGIPARSDFTVVGLSSLDSRFTLKFAKRLFGIRHAQLPYVGLLTIDIPVTEFGTLLEHYKPTTGSRIYIADQTGTIAISPEETLIGQNISTQDYYGKMAAEPADPGIFHSFDHVIQGENMLVSYKKIKATGWTILSISPISELNGELASFRRVMYVVIGICMLVSLMMALLLSENISAPIRKFIQSMSHAESGNFNIIIRYRRKDEFSYLFNRYNKLLQQIKALIDKLYVTELRKKEAELKTLQAQINPHFLYNTLDSINWLAINHDVPEISHMVTSLSDFFRYSLSKGRNIIPLRDELKQVESYLEIQQFRFQDKLAYELEKADPRLLEECLVVKLSIQPLVENAIIHGIQQRRGKGTIRIRVDSLHDVLCISVFDDGVGADPERLNQLLTDQQGNQSYGIRNVHMRIQQFFGESYGIRYYANTEDQAGLLAMIRFPVVTTWDEVIEDVDDDHSG
>NZ_CP009241.1|WP_038584851.1|272075_273542_+|extracellular-solute-binding-protein
MKRILFLGIALVLCGLVAYAIAYDRPLLVDFASEPAPEAVPVTQIRIALYDWTENLEVKNAIHQYNKSNPDHIEIIIMNLSTDVYGDTLNMLMTSGQGPDVFSVDNGWLATYVEKGYLAELSSFLNPGDLDRFPVWARDFADSSLYKGGIYFMPSSIETVRLIYNKQLFRNAGLDPEQPPVTFADMERFAGKISQAGVGVNKYGFGLPAGDSQYSLQTGLEMSSTYSGTYLYNYRTGRYDLSGYAPWLQMLLDMKAQGSLYPGETLLKRNSALRQFADGNIGMMYVTSKDYVKLQEYMPKDDWAVALPPVTSAAQKGAGALMMIPHSPLVVNSAASNREAAVKVWEFLQSKEFLTILFKQALALPVVDGILELPNMAPGLGHFSEFYPTAEDSIYPLSPQIMDQYDPNTVSIEPRDSGDRPRMQLYLQILSGEKELKEALRSETQRLNRMLDIAATGYSFKHEEYIYPEFNPKDPLKGDSLENLLSED
>NZ_CP009241.1|WP_052091747.1|273942_276048_+|collagen-like-protein
MVLLSTGPIENNLVGGVRPTQRVTVRVDNRSDVQASTVSVQGYYMLGGVRNLYVSESINVAANQVITTSYYADLDAFEFIFITPSENPADDPIQVSLWGKNSAGQLVTAHRLVFAELSGGFAGITGATGPAGATGATGAPGATGATGAGETGATGATGLPGTTGATGATGATGAGETGATGATGATGEAGEAGVTGATGATGVTGVTGATGEAGEAGVTGATGVTGATGATGAGETGATGEAGATGETGATGLPGATGATGATGATGAGETGATGATGATGEAGEAGVTGATGVTGATGVTGATGATGVTGATGEAGEAGVTGATGATGVTGATGATGVTGETGATGVTGPTGVTGATGATGEAGAAGVTGATGVTGATGATGVTGATGEAGAAGVTGATGATGVTGETGATGVTGETGATGVTGATGVTGETGATGVTGATGATGEAGAAGVTGATGVTGATGATGATGEAGAAGVTGATGATGETGATGVTGATGVTGETGATGVTGATGVTGATGVTGATGVTGETGATGVTGATGAGVATEGFSALLPALSVTTSTQLTGWTVASPYYDSPTFNETTGNYTIPATGRYSIEATVNYSTTAAISVALGAGVDPAFVVRRTSPVTTDLVSGLFPLLNVNIALVLSLRTILGNGTVTLAGEFELTAGDVIGLFYESDGLTVPLDLGSTSSGIVWSVHRLT
>NZ_CP009241.1|WP_052092411.1|276349_277246_+|sugar-ABC-transporter-permease
MLKHKVLLLMLLPGLIFLLINNYLPMFGIIIAFKNINYVDGILRSPWVGMDNFKFLFATSDAWIITRNTVLYNFVFIILNLVIAVSIAIALNELRNKLAAKFYQSIMFFPYFLSMVVVSYLVFAFLNVEYGFINKGVLSLFGLNEINWYSEPKYWPFILPLINLWKGVGYGCVIYLAAIIGIDSEYYEAALIDGASKWKQILHITIPLIRPVIIITTILAIGGIFRSDFGLFYQTTLNSGALYPTTLVIDTYVYNALINMGNLGMSAAAGLYQSVVGFFLVLGSNWIVRKVDKDQAVF

Crispr_ID: NZ_CP009241_4

• CRISPR_ID: NZ_CP009241_4
• CRISPR_location: 293959-294047
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_4

Consensus_repeat	Method
CTTCGTGCAAAACTGGCTTCGAAAG	CRISPRCasFinder

spacers of NZ_CP009241_4

>4.1|293984|39|NZ_CP009241|CRISPRCasFinder
TACACACCTAGTTTTGTGAGTATAACCTCGTTGAATAGA

CRISPR arrays and Neighbor proteins around NZ_CP009241_4

CRISPR arrays

The CRISPR arrays of NZ_CP009241_4

>merge|NZ_CP009241|4|293959-294047|CRISPRCasFinder
CTTCGTGCAAAACTGGCTTCGAAAGTACACACCTAGTTTTGTGAGTATAACCTCGTTGAATAGACTTCGTGCATAACTGGCTTCGAAAG

>NZ_CP009241|4|3|293959-294047|CRISPRCasFinder
CTTCGTGCAAAACTGGCTTCGAAAG	TACACACCTAGTTTTGTGAGTATAACCTCGTTGAATAGA
CTTCGTGCATAACTGGCTTCGAAAG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038584887.1|302899_303916_+|tripartite-tricarboxylate-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270234
NZ_CP009241.1|WP_038584864.1|286461_288177_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038584872.1|292639_293908_-|GTPase-HflX	unknown	unknown	gnl|CDD|274455
NZ_CP009241.1|WP_038584870.1|291012_292035_+|HAD-hydrolase-like-protein	unknown	unknown	gnl|CDD|273662
NZ_CP009241.1|WP_038584858.1|279909_283431_+|carbohydrate-binding-protein	unknown	unknown	gnl|CDD|271147
NZ_CP009241.1|WP_038584867.1|288217_291016_+|hypothetical-protein	unknown	unknown	gnl|CDD|182093
NZ_CP009241.1|WP_052091748.1|278218_279769_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|378792
NZ_CP009241.1|WP_038584560.1|305518_306892_-|IS110-family-transposase	unknown	unknown	gnl|CDD|376773
NZ_CP009241.1|WP_038584861.1|283616_285344_+|hypothetical-protein	unknown	unknown	gnl|CDD|366376
NZ_CP009241.1|WP_052091749.1|285330_286401_+|glycosyl-hydrolase	unknown	unknown	gnl|CDD|226678
NZ_CP009241.1|WP_038584896.1|308056_308623_+|methylated-DNA--[protein]-cysteine-S-methyltransferase	unknown	unknown	gnl|CDD|223427
NZ_CP009241.1|WP_038584856.1|277269_278163_+|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP009241.1|WP_038584884.1|300409_302728_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|225117
NZ_CP009241.1|WP_052092411.1|276349_277246_+|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP009241.1|WP_038584878.1|295558_298597_-|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|223627
NZ_CP009241.1|WP_038584881.1|298593_300228_-|hypothetical-protein	unknown	unknown	gnl|CDD|227059
NZ_CP009241.1|WP_038584893.1|307488_308082_+|methylphosphotriester-DNA--protein-cysteine-methyltransferase-family-protein	unknown	unknown	gnl|CDD|225080
NZ_CP009241.1|WP_052091750.1|308603_309506_+|DNA-3-methyladenine-glycosylase-2-family-protein	unknown	unknown	gnl|CDD|223200
NZ_CP009241.1|WP_038584875.1|294612_295407_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038584890.1|304079_305084_+|2-keto-3-deoxygluconate-transporter	unknown	unknown	gnl|CDD|235384

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038584887.1|302899_303916_+|tripartite-tricarboxylate-transporter-substrate-binding-protein	gnl|CDD|270234	cd07012, PBP2_Bug_TTT, Bug (Bordetella uptake gene) protein family of periplasmic solute-binding receptors; contains the type 2 periplasmic binding fold. The Bug (Bordetella uptake gene) protein family is a large family of periplasmic solute-binding (PBP) proteins present in a number of bacterial species, but mainly in proteobacteria. In eubacteria, at least three families of periplasmic binding-protein dependent transporters are known: the ATP-binding cassette (ABC) transporters, the tripartite ATP-independent periplasmic transporters, and the tripartite tricarboxylate transporters (TTT). Bug proteins are the PBP components of the TTT. Their expansive expansion in proteobacteria indicates a large functional diversity. The best studied examples are Bordetella pertussis BugD, which is an aspartic acid transporter, and BugE, which is glutamate transporter.	7.04256e-102
NZ_CP009241.1|WP_038584872.1|292639_293908_-|GTPase-HflX	gnl|CDD|274455	TIGR03156, GTP_HflX, GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like). [Unknown function, General].	1.44295e-170
NZ_CP009241.1|WP_038584870.1|291012_292035_+|HAD-hydrolase-like-protein	gnl|CDD|273662	TIGR01509, HAD-SF-IA-v3, haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. This model represents part of one structural subfamily of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The superfamily is defined by the presence of three short catalytic motifs. The subfamilies are defined based on the location and the observed or predicted fold of a so-called "capping domain", or the absence of such a domain. Subfamily I consists of sequences in which the capping domain is found in between the first and second catalytic motifs. Subfamily II consists of sequences in which the capping domain is found between the second and third motifs. Subfamily III sequences have no capping domain in either of these positions. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that representing it with a single model is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms: (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only one of the variants each. Variant 3 (this model) is found in the enzymes beta-phosphoglucomutase (TIGR01990) and deoxyglucose-6-phosphatase, while many other enzymes of subfamily IA exhibit this variant as well as variant 1 (TIGR01549). These three variant models were created with the knowledge that there will be overlap among them - this is by design and serves the purpose of eliminating the overlap with models of more distantly related HAD subfamilies caused by an overly broad single model. [Unknown function, Enzymes of unknown specificity].	1.51327e-16
NZ_CP009241.1|WP_038584858.1|279909_283431_+|carbohydrate-binding-protein	gnl|CDD|271147	cd04081, CBM35_galactosidase-like, Carbohydrate Binding Module family 35 (CBM35); appended mainly to enzymes that bind alpha-D-galactose (CBM35-Gal), including glycoside hydrolase (GH) families GH27 and GH43. This family includes carbohydrate binding module family 35 (CBM35); these are non-catalytic carbohydrate binding domains that are appended mainly to enzymes that bind alpha-D-galactose (CBM35-Gal), including glycoside hydrolase (GH) families GH27 and GH43. Examples of proteins which contain CBM35s belonging to this family includes the CBM35 of an exo-beta-1,3-galactanase from Phanerochaete chrysosporium 9 (Pc1,3Gal43A) which is appended to a GH43 domain, and the CBM35 domain of two bifunctional proteins with beta-L-arabinopyranosidase/alpha-D-galactopyranosidase activities from Fusarium oxysporum 12S, Foap1 and Foap2 (Fo/AP1 and Fo/AP2), that are appended to GH27 domains. CBM35s are unique in that they display conserved specificity through extensive sequence similarity but divergent function through their appended catalytic modules. They are known to bind alpha-D-galactose (Gal), mannan (Man), xylan, glucuronic acid (GlcA), a beta-polymer of mannose, and possibly glucans, forming four subfamilies based on general ligand specificities (galacto, urono, manno, and gluco configurations). Some CBM35s bind their ligands in a calcium-dependent manner. In contrast to most CBMs that are generally rigid proteins, CBM35 undergoes significant conformational change upon ligand binding. GH43 includes beta-xylosidases and beta-xylanases, using aryl-glycosides as substrates, while family GH27 includes alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases.	4.07052e-13
NZ_CP009241.1|WP_038584867.1|288217_291016_+|hypothetical-protein	gnl|CDD|182093	PRK09819, PRK09819, mannosylglycerate hydrolase.	1.42321e-126
NZ_CP009241.1|WP_052091748.1|278218_279769_+|ABC-transporter-substrate-binding-protein	gnl|CDD|378792	pfam12010, DUF3502, Domain of unknown function (DUF3502). This presumed domain is functionally uncharacterized. This domain is found in bacteria. This domain is about 140 amino acids in length. This domain is found associated with pfam01547.	8.49133e-45
NZ_CP009241.1|WP_038584560.1|305518_306892_-|IS110-family-transposase	gnl|CDD|376773	pfam02371, Transposase_20, Transposase IS116/IS110/IS902 family. Transposases are needed for efficient transposition of the insertion sequence or transposon DNA. This family includes transposases for IS116, IS110 and IS902. This region is often found with pfam01548. The exact function of this region is uncertain. This family contains a HHH motif suggesting a DNA-binding function.	5.85501e-21
NZ_CP009241.1|WP_038584861.1|283616_285344_+|hypothetical-protein	gnl|CDD|366376	pfam00933, Glyco_hydro_3, Glycosyl hydrolase family 3 N terminal domain.	1.1961e-56
NZ_CP009241.1|WP_052091749.1|285330_286401_+|glycosyl-hydrolase	gnl|CDD|226678	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only].	1.24135e-62
NZ_CP009241.1|WP_038584896.1|308056_308623_+|methylated-DNA--[protein]-cysteine-S-methyltransferase	gnl|CDD|223427	COG0350, Ada, Methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	4.835e-48
NZ_CP009241.1|WP_038584856.1|277269_278163_+|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.18009e-60
NZ_CP009241.1|WP_038584893.1|307488_308082_+|methylphosphotriester-DNA--protein-cysteine-methyltransferase-family-protein	gnl|CDD|225080	COG2169, Ada, Adenosine deaminase [Nucleotide transport and metabolism].	9.1303e-48
NZ_CP009241.1|WP_052092411.1|276349_277246_+|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.87915e-119
NZ_CP009241.1|WP_038584878.1|295558_298597_-|DEAD/DEAH-box-helicase	gnl|CDD|223627	COG0553, HepA, Superfamily II DNA/RNA helicases, SNF2 family [Transcription / DNA replication, recombination, and repair].	1.8819e-114
NZ_CP009241.1|WP_038584881.1|298593_300228_-|hypothetical-protein	gnl|CDD|227059	COG4715, COG4715, Uncharacterized conserved protein [Function unknown].	1.66442e-05
NZ_CP009241.1|WP_052091750.1|308603_309506_+|DNA-3-methyladenine-glycosylase-2-family-protein	gnl|CDD|223200	COG0122, AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase [DNA replication, recombination, and repair].	7.13014e-57
NZ_CP009241.1|WP_038584884.1|300409_302728_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.59855e-27
NZ_CP009241.1|WP_038584890.1|304079_305084_+|2-keto-3-deoxygluconate-transporter	gnl|CDD|235384	PRK05274, PRK05274, 2-keto-3-deoxygluconate permease; Provisional.	1.66196e-149

Protein sequences

>NZ_CP009241.1|WP_038584872.1|292639_293908_-|GTPase-HflX
MESTPQHAVIVGVQLQNETNFAYAMEELRNLAAACNIKVIGELSQKASRINPSHYIGTGKIQELSLMLEDEDTLVIFNDELTPSQIRNLESSLDRQVIDRTILILNIFAERAKTKEAQLQVEVAQLQYMLPRLTGMRESLGRQGGGAGLKNRGAGETKLELDRRRIEERISALQTELQTQVSRRQIQRKQRHKNEVPVICLVGYTNTGKSSLMNVIVETYHPGSGKQVFAKDMLFATLETSVRSIKLPDQKTFLLTDTVGFVSQLPHHLVKAFRSTLEEVTEADLLIHVVDISDPQHEQHMAVTTETLKALGADGIPTIYAYNKADLTDQPYPVVQENSVILSAKQNSGISELTGLIRGHVFNDYIQCEILVPFDRGSVVSYFNEHAHIQKISYEEQGTKLQLECRTADYERFRGDFIELPQ
>NZ_CP009241.1|WP_038584870.1|291012_292035_+|HAD-hydrolase-like-protein
MTEKKLPGFGLGMSQLAAGFFEQESGGDGLFRRGVGGVAAILTPKDRKTEFIVYEDKTLCYVKSSMGSPALYPFHDAAFEGPAEAVLMDLDGTSVHSEGFWMWIIEQTVARLLGNPRFALRPEDEPHVSGHSVSEHLQYCIAKYCPQRSVEEARQLYFDITHYEMNEIMQGRGKPGAFVPAPGLGEFLQTLKSKGVKIGLVTSGLYEKAWPEILSAFRALDLGDPFGMYDAVITAGQTFHPGQAGTLGELSPKPHPWLYAETARIGLGLSTEKRRRVVGIEDSAAGVISIRLAGFAALGVTGGNIRSSGVLPLLQQEFGSLTEMLPLLLGEAGPAAAFEA
>NZ_CP009241.1|WP_038584867.1|288217_291016_+|hypothetical-protein
MKPDTSHIKQIKVVSNTHWDREFRRSFERTRRNLLTMLDTTLDILAADPDYASFTLDGHSILLEDYVEMRPERRGQLEQLMQEGRLIAGPYYTLAEEFSISHEALVRNLILGRSVVEKFGGKTGTVAYTPSSWGQTGQLPQILQDFGLDKMMFYRGISHHEADAEWIWSAPDGTQVLASRFGLYARYNWYYQVHRAVTRGTVFDKTYQWGKENDLPFRLSDALSGEDQAYEIKSPVVQYDKEKLKQAVEDMIEREGRHFTTEVFLAMHGHDISVAHPLESQIIADAQELLGDKYNIEQTDLEGFWNEAQKHLDREHLPVLTGERRSYLKEGMWTFLFPGTISARTYLKQMDFLASNALVYYAEPLASLASALGSAYPAGYMERGWRYLLSNHTHDANGGCAPDNVCADMEYRYRKAGDIGDIVTEDAMAYIASQLSPKGMEQDEMQLVVYNPLPMERNAVVLLDLEVPRVNGALSVSLSSALDPLVERQAIASGNSSVFVDSIWDVPTILESRRIRLLASLTRLPGLGYRTYRIVPEARELRSSGTLITGPDTMENEFLKVQVNPDGTLDLHNKTTGRSYSSLNYLSDQGENGNAWKHVSPLHDRKYSSLGVPSQVAVTVSGPLSSTIEAEYEFAVPADYGDGESRSRVMAKLPVKVAYTLEKGAKHVLVKLTVDNRAKDHWLRANFPTGLRTGVTWADSHYDVLSRPIPLPDSTDWAERAEGTHPLRTFADMTDGRDGLAVLPKGIYEYEAFEDEHSTLALTLIRACRIKLAVSEEKLTELPDQGIQCPGLQSFEYAIHVHEGDWQEADLLAQAAQLYTPVRIAASGRGQGALPAEASFFTLNNPALHVSCVKQAEDGSGTILRLFNGSDTEQKADITFGIAPEQVQCCRMDETLLDEPELQLQLAANLLTVTIPAKKIASYKISMGVWAK
>NZ_CP009241.1|WP_038584864.1|286461_288177_+|hypothetical-protein
MNKRTGNTNQGIDQQQMLIRKMRMLESRYDPEICMLRSPFSSPGYHTTLKQAEFIHSTRDSLSYALGLLDTELAEMEQRAFDIIRQVISLQDTDRSHATFGIWSWFYEEPLAQMSPPDWNWADFCGSRLIQALSRHGWRFPEALREDVIRSIDYACEAIMKRNVGPDYTNIAIIGAFVTRIAGEQLGREDYAEYGLKRLEKLYAYTQQRGAFQEYNSPVYTYIAILELSKLRSETTDSTVKRLSDELIELTWQTVAGYYHPATAQWSGPHSRSYQTLLNDQSKAFLQVATQGEVMFFPWEELPYEEEWYKSGFYCPAAYLDAFKVRGTKEVRQLYEGNAGDGSGKWAVTFMNPQVSIGSFTDSDLWNQRRPLVAYVDNNGSPSYIQLRCLHDGYDYCSARFKARQDQGHLLFGVDFLTNGGDTHPNLDRIDGEIEAGDFRLRLEIGGSLDGIFTETVEDGAVIKIGETVLRLTTWFAAFTGHSGAKRSWGWEIHTGEDAILVDMVLYSGLRKSINFTHLRQAAFVFSLDIQEGGDIPRPLVEMTSSGRLRISGSIEEPEAFSLTLRPGPAE
>NZ_CP009241.1|WP_052091749.1|285330_286401_+|glycosyl-hydrolase
MPDTKQLLEGKLDLLFECMISPRHQGNWGMDMDHWDWVPGVGLISILDYGTAGGQDKAMNYLLQWVERNKQKAEGVKVINSMAPYAVFPELFRRTGDKWFLHKAQETAAWMLEDAPRTREGALEHTVTEAALFPEQVWADTVYMAVLFLARLASLTGDRGMAEAALQQTLLHLRLLQDPETGLLFHGWNCREGSHMSAVRWARANAWITLAVPQIVAGIKGLVPVPEELYSRYSELASALRSCQGTGGLWHTVLDRPDYYQETSGSAGIACGFIQAVRHGMLEPSYLGSARVTLEGILPLIQDNGEVQGVSGGTPVMPSEEAYNEIALYPSLYGQGLVMQLLAQALNLDLNLDLGQ
>NZ_CP009241.1|WP_038584861.1|283616_285344_+|hypothetical-protein
MRKALAKEERDWVERTLRSMSLREKIGQTMQDHAGRLPFQGMDEGTIRAYLEKYPVGSFFIGGEVIQKAAGKAEEYREWVELLQKVSKYPLLFSGDLEFGAGSAVKSLTAFPPLLALAAADDEALAYEYGKYTAIEGRAAGFTWALAPGTDLLLNWMNPVITTRCLGDDAERALRLSSAVMRGMQDYGIAACAKHFPGDGVDYRDQHIITTINGLSEEEWFATYGRVSQQMIDQGVMSYMTGHIALPWLEANVQGNKPVPATVSARITTELLRNRMGFEGVVLSDALDMGGFLAWGDYETRIVDCFNCGTDVLLWPGVNYFEVMERAVASGKVTMERLDASVRRVLEMKAELGMQHLDAEGRDHSAAPLLNDKLHPELDREARELSTTLAGRCITLVRNRRNLLPLNPQTTRRVLVIMLNKVTEGRKYDRMELFVGHLKARGLQVDILDEFEPLNTLQKWEQSGIRWDAAFTPYFLPLHGMMNTARPVGEAAKAIWAMQHAETIHPIGISFATPYLLRDIPFLDTLVNAYSLHEDTVALTVKALFGEIPFQGGSPVQADPEGMNTLPRGLQHARY
>NZ_CP009241.1|WP_038584858.1|279909_283431_+|carbohydrate-binding-protein
MRIQKNIALLLILALMLMTFWIPDGSMGLASAAAKDEIATSQVIGQQADSQEAAADSVHNSTVTASTYEPPMTLLWQVGDSDNSSAEFTVFNNVYSKTLQVPVPPGHWDNVPKGMKADANGFMNLSFHLSQVPEYGVQFSLKVIDASTAIPQLAVFTNGLMSGLIQITGLNDGEKTLENTWKQTYRLYIPKEQLKTGRNAVRLIVDRGLYADPQAPGYDGDKYLWFEWDYFKLESLNAPAVEPIHGRYVHLGSTIAAATFKYDEHAIRHLGPMAKWMGIAYSGNWMRASFWSDTSAGWDPQGRNYLATLRDLNLEPMVNIIGGNWRNNSELSSGTVPAALRSYYTNFVSKFGDLYQYAETGNEPGLFGWAQKAVVATHELMDEERATNSQPYLKIVAPGWAYWPYNGIPDGWERDAEQRREIEELSDVTNGHSYGGTGVQPLPGGSLYENLRVYGDADDGFGKEMAMSETGTNDNHSDNTKYGTYAYRFAAAFDREMRGNIGYVDHIMQHAAFFNDGTEFGLFASGINWNTHRYEDTVAVPANSSEAGETRLKTFRRLAAAYATHGRPLSYEVLNTCGCSSNMKKVYFRAVDTSALGTSAIGAKSDKILLNFVNFEKKPMTMKVRVTMPGSGQYAGEVFGAGNSYAAAHSTVQLTATPHITLTVTLGAGETVQYILDKLETEAPSVPGSPAAVALSHEQIKVTWNASTDNDAVVSYNVYRDGGVTPVMTVPGRITFFSDYSVAPETQYSYRVQAVDDFGNISALSSAVSATTSAMPITPHVPGDPTKFEAEAASFALPLRIGNNSSASGGKVVEQTHGGGISIQGLYSELGGSYTLTIAYASNQDSKKNIVVNGQRLSTVTLPSTGSWNSNITARQFGVTLQPGYNTISFTSAGNGANLDYFKLEEGLYVPVSAWYTVEHDHAYIDYTGFETAPNGVSHVTYSPDSSAVFNFNGIGVRWRSDIKSNMGSADVYVDGQYKETVVIPQAGLEGENKIVYELTGLDYGLHRIEVVHNTGTIMVHGFEFEGYESTLPAPMADLTVTEVGWNIVNSDGTPSSHVTPELGDSLIFWAKVKNIGVRPTPLNTSTGLGQITGGAFSVNGGVVSWSDTNNTVIQPGEEITLTANSSAQGTPRWTVPTIGNFTISFFVNDIWRYEEMNKENNKLNKTLQISLN
>NZ_CP009241.1|WP_052091748.1|278218_279769_+|ABC-transporter-substrate-binding-protein
MTGKRGTGLLLSLVLMIGMTLSGCSGNNNNNKTAAPEKTAESTAAPAATETAKATEATETTNELEQVELSLYLPGGPDKDVASVEQAINAYLKDKINATIKINQLSWDKPADKVNLMIQSGEVFDMVFTWNFMTNAAKGAYLPLEELLDKYAKETKAQINPAYLQAATVNGHLYAVPTEKELGQSVGFAFDKAIVDKYGFDVNSITKLEDIEPMLKTIKEKEPTMSPLFMNHTDSLNWFTVYPESEDLDGSNEIPTLLDYKTMKVFNEYDTPEIVERLKLIRKWYQAGYINKNGATDKTELKDAVKSGKAWFVYGNMNPTSTNDWTRLAEKPMIIKTLLPVQVSTKSLQGSMLAISRTSKNPERAMMFMNLIHTDPVLYNLLTFGIEGKHYNKVGENTVDFIADSGYNSVSSWMIGNVLLNYLNKNEDPKRVQLYTDWNKNSKVSPVIGFVFDSTKVQSQIGALINITKQYKNTLYSGEQDPEPILKEMNSKLKAAGLEAVINEIQAQMDAFLAAK
>NZ_CP009241.1|WP_038584856.1|277269_278163_+|carbohydrate-ABC-transporter-permease
MTNNEISKVTNMILHIIFIILTIACLLPIVLVFMISITDYDYIVLNGYQFFPEKLSLEAYAYIFKDYTIIAKAYGVSIFVTVVGTLLSVFISSLYAYPISRTDFKYRGFFAFLIFFTMLFGGGLVPWYMVYTQVLDLKNSIWSLIIPMLLSPFNVLIMKTYFQMSVPPALIEASKIDGAGELRTFFRIVFPLSLPVFATIGLFNTLHYWNDWFNSMIFITDTKLYSLQYLMYKMISQADYLSRNSALIQGSATELAKLPGETIRMAMALIGIGPIVLAYPFFQRYFIKGLTLGSIKG
>NZ_CP009241.1|WP_052092411.1|276349_277246_+|sugar-ABC-transporter-permease
MLKHKVLLLMLLPGLIFLLINNYLPMFGIIIAFKNINYVDGILRSPWVGMDNFKFLFATSDAWIITRNTVLYNFVFIILNLVIAVSIAIALNELRNKLAAKFYQSIMFFPYFLSMVVVSYLVFAFLNVEYGFINKGVLSLFGLNEINWYSEPKYWPFILPLINLWKGVGYGCVIYLAAIIGIDSEYYEAALIDGASKWKQILHITIPLIRPVIIITTILAIGGIFRSDFGLFYQTTLNSGALYPTTLVIDTYVYNALINMGNLGMSAAAGLYQSVVGFFLVLGSNWIVRKVDKDQAVF
>NZ_CP009241.1|WP_038584875.1|294612_295407_+|hypothetical-protein
MAVLTTNTITRNPTGVLGPISQAVIKIVNSGTAKAVVYITGLNNDVSPATLFAQELFEVNYREVVSKTYNITENFFQFNVLYSQEKLGVQIFLVDSGGKWFPVSLTQLAVSRITSEFRDNIAVTSTDFAAISFRRNGALTIPEGVAAEIRPDGVEILASTPIRYKIVAGGTVNGSFVNFPTPTTDISVNDTALQVNYTCSTVTGGRVITQGLGSGISGAYQDVVVNLLNQQLFYDLQEEPVTLVVSSLAGEDNLAATFRMAEQW
>NZ_CP009241.1|WP_038584878.1|295558_298597_-|DEAD/DEAH-box-helicase
MSKYMRNITVQLALTQYGDALIYGVDDRDDYVPGVQLKQKLFSWHEESFYGTELTLQNADGVDLVVLPAEQVIPFFAERRLLRHVGWSWQGDAELLTGLAPAIAGLLAEKKYAPSLSAYREGKLQWDWDDKALELAAEGSGSAQSALRGLAGRRNLADGMRAAFSAAVFQQYYGTEAEAADLRSEYPLLFSSSAGAATAGMDDDSWLMSIGWKADTAPFRPALQLLEPDDEKSYWRLQLLLQDKRDESALVPLRLTGDGEPHGLWPAAWTPHVHERASGWLSRLRESLAGEHIGHGDDVLGEPLSDGDAWRFLTVDSRLLLEAGWQVLLPAWWEAASRKKPRLRAKISSGEGSGSSGGQSLFGLDSLVDFDWRISIGDAELSEAEFADLVARGERLVQFRGKWIPLDPALLAQIQRAMAGMDKSQGLSFQDVLQLHLLGGGEEQDIEAAEAEQAEENAARFRLEVELNEHLVRLIGQLGHRSDWPKPEVPAGLHAELRSYQHEGYAWLVFLRRFGLGACLADDMGLGKTVQLISYLLHLREQQGEAGPSAMGPGRQTDPPDWPSLIICPTSVLGNWQKELQRFAPSLNIMLHYGSRRLDAGYFYGAASQADVVLTSYATAALDQELLKQFTWATVCLDEAQNIKNAGTKQSVAVRSFPALHRIALTGTPIENKLSELWSIYDFITPGYLGSPKAFQDRFANAIEKERNAERTADLQKLVKPFMLRRKKKDPAIQLDLPDKNEMKTYVHLTAEQAALYDQNVTGLLERMKQLEGIERKGAILAALTSLKQLCDHPMLLTKEALPDPDGEGQLDTTSLIERSSKLERLLAMVRELREENERCLIFTQYVGMGKMLQAVLRQELQEPVLYLNGSTSKTARDRMIEQFQTPPQEGGDLLAAGQLQSDQPNVFILSLKAGGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTKDVQVHKFISLGTLEERIDEMLESKQQLSDDVISGSEGWITELSTDALKDLFTLRQEWVG
>NZ_CP009241.1|WP_038584881.1|298593_300228_-|hypothetical-protein
MQRNFYMADQEWDKLISDVAYQFSDITLKRGFQYYKQDRVHAFKMISVGSILALVEGGEDYSVTIDLDTLSASRCSCPVQHSCKHMAAVLMKYAEQQGRLVHMLANAKTTSQWIRNPVVKETPVAGGSARRKEQLEELAALVPSGNVEQWREYLALLTAPLAPTVRNSQYTDRALAAISEATPALPPASGLLYKLHAHLFVLESLLKPAGPHVPGAGASLGYYTSVAVSELQKAVTDLMKNSLPLAAEPEAWPRVSETLAYLRREMLNEPRDRSREQPYYSLCYDLIWRGWIAPNASGPAMYLEELEALRQTGEEAGISLSRHSQQLAESRMYFYLNDDKGAWELLGKASERPGLYPDELMSFLAPLAEAGHWSRLALWLAEIGPLLTSRLYNLKNYAGYWEEAVRRLPETESRMWDTLIGMLPLSREIYEEMLLDHGRWQEWMDYQLSSGKEPADFRVSDLQPIEKNAPELLLPFYHQAAERFVLEKNRHGYKAAVKLLKRLSKLYKKLKREERWEQFLDSFTFRYSRLRALQEELRKGKLIP
>NZ_CP009241.1|WP_038584884.1|300409_302728_+|helix-turn-helix-transcriptional-regulator
MLRFKLKYLLNNKQTRLILMLTFSVSLLITLIGLFSYREYRNALDTELNTPNVELLQINMDVTNRAFRESDNKAVDLAFHPAVLKYMDADPADNALAAAEPQNFLKTLATEPDVHAISVIKFGDHSVVSSNYGYRALWEEAPEHAWNSWIDEMKQKPLLIKRRVYTGTDARLTGTELLSLARPIVRNGDVTGAVLIDLDYDMLFSKMYTHLSSYQFVYNLEGELIYPKLNLPFPLADMNNVLSDIDVSPFAHVKLQGKAYMANQTFSNVTGWRLISLVPMEQLLKNVKTARNMMLMLSLISIAVGCSAIYYYSFAAFRPLKRINKLLMPDQKLAGHGNLYDLEPVIGKLVGDFQSKSLVAEWSLPELRSKFVSDLITRSIGTQETLTKWEHYFGGWKEGPFVILTISVDRHSKWTSAYVEEDQLLLKYAMNNIVFEFFGPAWRTVTATPRKDSLVVLLQPKDDNSGHLREDAGKLIAILSDVLKVSVSIGIGEPVSAISQVARSYSESELALSYRLYEGYGHVREFSAKESKYEEGGAAADDAWRLEVLHALKSFDAATALQWVRKWSADTRKKAVQPQKVVRVVDDLIGEILNMATSGGHPLPAELADYTWHQVMTMDLSDIEEMLCSIVIHMSGVLEVHRQSKEYLMVQELIRYMESHLQDNIGLQDIAAHVKMGVSSVSTIFKEETGTTLYDYLTNLRIDKACELLQGSSLKIAEIALRVGYQNENSFIRAFRKIKSVTPGKFRESSKYPNEYADRPKPRHSGVSDDSE
>NZ_CP009241.1|WP_038584887.1|302899_303916_+|tripartite-tricarboxylate-transporter-substrate-binding-protein
MVLKRTTKIGIWTASVLAVLTMVWAGNRMITSDNSRENVSGDFPVKPITLIVPYAAGGGTDTTARALAKATEKVLGQPIIVLNRTGGGGSVGLMEGANAKGDGYTVTFLPAELTILPHLGLLPITYEKFKPIAQTNFDPSAITVRAEAPWQTVNEFLDFAKAHPGELKMGNAGTGSIWHLAAVTLERETGVKFAHIPFEGGGPAVSALMDGFVDAVPVSPAEVKKYVDEGKLRTLAVNADKRSEAMPGVPTLEEETGIHVNFTGTWRGLAVPKDTPDAIAELLAGAFIKGTEDRDFREYMKINGLGLLVTDGKAFSKQLKESDDLFSGMIPQLGLSRK
>NZ_CP009241.1|WP_038584890.1|304079_305084_+|2-keto-3-deoxygluconate-transporter
MKIKKALDKIPGGMMLVPLFLGAIIHTAFPNAGEYFGGFTKGLMTGTVPILAVWFFCMGAAIDVRATGSVLRKSGTLVLTKIAVAWVIALIAIQFLPEGGIQNGFFAGLSVLAIISAMDMTNGGLYASIMQQYGTKEESGAFVLMSLESGPLVTMLILGSTGVAVFEPHVFVGAVLPFLIGFVLGNLDHDLRTYFGKATQTLIPFFGFALGSSIDLGVIVDTGLLGILLGIVVIIITGIPLILADKFIGGGNGTAGLAASSTAGAAVANPMLVANMKPEFLPAAESATALVAASVIVTSILVPIITAYYSDYMRKKNPPAADGPVDLKTQKAAI
>NZ_CP009241.1|WP_038584560.1|305518_306892_-|IS110-family-transposase
MGKSLHIQGLKGTKFSQQLRGVNLEQVLIVAIDAAKLHQKALICNYFGDILAKPFFFSVNQSGMQTLYHAIEQAVASTGAVRLFLGIEATGHYYEDIVREMAKQGYLVQILNAYTTFEERASALNWCKTDDLDLVAIAHALKSNKATEFRLAEGLQRQLHVLTRARRSEIRKRSTLRMEIRTLMDIVWREFQGYADHQNGRARKIKVFSNFWGKASLFFMEHYPHPAAICKLGETGLRRLSIQHNLKLRVAAIRKLLLVAAESLSSDEQTLRPELLLLRMKLQDLRAFDAKIDTLEQEIEALLLQTDGRVLLTVPGLGVSTAAELYAEIGDVSHYTHAGQLIKKAGTNPVVKQTGGSAGSYGKISKQGNSHLRYVAYLAGRSLCLHNPDLKPFYERLKSRGKHPRSIFVAMGNKMLKIAFAMLRDKKPFLSTKPSCPFAKEINKKLRFSCFITLDVA
>NZ_CP009241.1|WP_038584893.1|307488_308082_+|methylphosphotriester-DNA--protein-cysteine-methyltransferase-family-protein
MDQALFEQVYDSVVKRESTYDGVYYTAVLTTHIVCRPSCRARTPKAGNVVFYGSLQEATRAGFRPCKRCRPEEGGRLRPDAVLAAQADAVMAERYGEKLTLQSLAEQLKVSPFHLQRTYKRVTGQSPAARLDQLRLEKACGLLADTGLAIAEVGKAVSFQGPSHFAAWFARKTGLAPTEYRTELKGGIQHDPDTQDH
>NZ_CP009241.1|WP_038584896.1|308056_308623_+|methylated-DNA--[protein]-cysteine-S-methyltransferase
MTQTLKTIEIFHHTLNVRNRDWTLWASKKGLIRISYQEDQGVLPASWLKTYAPSHQFSEDAGIFDQFGATQLLESYFNGEPVSFSSIPLDLWGTPFQQEVWMGLAGIPHGAIVTYKELAVSIGRPQAVRAVGAANGQNPLPVVLPCHRVIGTNGTLTGYRGGLKLKQELLKLEGITNVGAAGHERFAF
>NZ_CP009241.1|WP_052091750.1|308603_309506_+|DNA-3-methyladenine-glycosylase-2-family-protein
MNDLLFELPLPEFFDLSACLEYMNRSPLECLFRSDGEGVTRLFMLEGTPSLVRLTVAAGTPRLQATLLTGAFPGPKPLAELAQYIVEWFDLDRDLAPFYRLADADPLLQKLAASERGLRIIGIPDLFEALCWAILGQQVNLAFAYRLKQQLTAEYGKSLEYEGHTYYHFPGPETFLQVSMEELCSLQLTRSKARTLLDVAALISGGELSREELLALPSPEAAEQRLLKIRGIGPWTSQYVRMRCLRDTTAFPVGDVGLQNAVKFLTGMDRKPTPAELLALSVPWHGWEAYATFYLWRALY

Crispr_ID: NZ_CP009241_5

• CRISPR_ID: NZ_CP009241_5
• CRISPR_location: 1054825-1054913
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_5

Consensus_repeat	Method
TGCTTCCGAAGCGAGTTTTGTAC	CRISPRCasFinder

spacers of NZ_CP009241_5

>5.1|1054848|43|NZ_CP009241|CRISPRCasFinder
AAAGAATACCAAGGAAGACTAACCTCACAAAACTTAAAGCATA

CRISPR arrays and Neighbor proteins around NZ_CP009241_5

CRISPR arrays

The CRISPR arrays of NZ_CP009241_5

>merge|NZ_CP009241|5|1054825-1054913|CRISPRCasFinder
TGCTTCCGAAGCGAGTTTTGTACAAAGAATACCAAGGAAGACTAACCTCACAAAACTTAAAGCATATGCTTCCGAAGTGAGTTTTGTAC

>NZ_CP009241|5|4|1054825-1054913|CRISPRCasFinder
TGCTTCCGAAGCGAGTTTTGTAC	AAAGAATACCAAGGAAGACTAACCTCACAAAACTTAAAGCATA
TGCTTCCGAAGTGAGTTTTGTAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_156130812.1|1047512_1047668_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_052091821.1|1056970_1057609_+|cysteine-hydrolase	unknown	unknown	gnl|CDD|238245
NZ_CP009241.1|WP_038586333.1|1059310_1059544_+|CopG-family-transcriptional-regulator	unknown	unknown	gnl|CDD|279710
NZ_CP009241.1|WP_038586304.1|1046388_1046799_+|YjdF-family-protein	unknown	unknown	gnl|CDD|378596
NZ_CP009241.1|WP_038586310.1|1047765_1048419_+|hypothetical-protein	unknown	unknown	gnl|CDD|180682
NZ_CP009241.1|WP_038586315.1|1050306_1051680_+|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP009241.1|WP_081965688.1|1048562_1049597_+|DUF4097-family-beta-strand-repeat-protein	unknown	unknown	gnl|CDD|372574
NZ_CP009241.1|WP_038586324.1|1054963_1055851_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|223673
NZ_CP009241.1|WP_038586330.1|1057605_1059063_+|MFS-transporter	unknown	unknown	gnl|CDD|129794
NZ_CP009241.1|WP_038586322.1|1054029_1054818_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213260
NZ_CP009241.1|WP_081965689.1|1049621_1050296_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP009241.1|WP_038586336.1|1059573_1060710_+|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl|CDD|238082
NZ_CP009241.1|WP_038586318.1|1051774_1052302_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038586339.1|1061675_1062071_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133398
NZ_CP009241.1|WP_038586327.1|1055894_1056932_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|223787
NZ_CP009241.1|WP_038586341.1|1062071_1062779_-|FAD-dependent-thymidylate-synthase	unknown	unknown	gnl|CDD|376804
NZ_CP009241.1|WP_038586345.1|1063021_1063798_+|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl|CDD|319819
NZ_CP009241.1|WP_038586347.1|1063941_1064127_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038586320.1|1052334_1053138_-|AAC(3)-family-N-acetyltransferase	unknown	unknown	gnl|CDD|376807
NZ_CP009241.1|WP_038598622.1|1053530_1053902_+|DUF2294-family-protein	unknown	unknown	gnl|CDD|378372

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_052091821.1|1056970_1057609_+|cysteine-hydrolase	gnl|CDD|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	1.43514e-54
NZ_CP009241.1|WP_038586333.1|1059310_1059544_+|CopG-family-transcriptional-regulator	gnl|CDD|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.00256217
NZ_CP009241.1|WP_038586304.1|1046388_1046799_+|YjdF-family-protein	gnl|CDD|378596	pfam11208, DUF2992, Protein of unknown function (DUF2992). This bacterial family of proteins has no known function. However, the cis-regulatory yjdF motif, just upstream from the gene encoding the proteins for this family, is a small non-coding RNA, Rfam:RF01764. The yjdF motif is found in many Firmicutes, including Bacillus subtilis. In most cases, it resides in potential 5' UTRs of homologs of the yjdF gene whose function is unknown. However, in Streptococcus thermophilus, a yjdF RNA motif is associated with an operon whose protein products synthesize nicotinamide adenine dinucleotide (NAD+). Also, the S. thermophilus yjdF RNA lacks typical yjdF motif consensus features downstream of and including the P4 stem. Thus, if yjdF RNAs are riboswitch aptamers, the S. thermophilus RNAs might sense a distinct compound that structurally resembles the ligand bound by other yjdF RNAs. On the ohter hand, perhaps these RNAs have an alternative solution forming a similar binding site, as is observed with some SAM riboswitches.	4.52065e-48
NZ_CP009241.1|WP_038586310.1|1047765_1048419_+|hypothetical-protein	gnl|CDD|180682	PRK06761, PRK06761, hypothetical protein; Provisional.	3.86406e-13
NZ_CP009241.1|WP_038586315.1|1050306_1051680_+|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.34383e-53
NZ_CP009241.1|WP_081965688.1|1048562_1049597_+|DUF4097-family-beta-strand-repeat-protein	gnl|CDD|372574	pfam13349, DUF4097, Putative adhesin. This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.	2.06418e-11
NZ_CP009241.1|WP_038586324.1|1054963_1055851_+|ABC-transporter-permease	gnl|CDD|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	2.07927e-58
NZ_CP009241.1|WP_038586330.1|1057605_1059063_+|MFS-transporter	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	5.70754e-46
NZ_CP009241.1|WP_038586322.1|1054029_1054818_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213260	cd03293, ABC_NrtD_SsuB_transporters, ATP-binding cassette domain of the nitrate and sulfonate transporters. NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	5.75402e-121
NZ_CP009241.1|WP_038586336.1|1059573_1060710_+|DNA-polymerase-III-subunit-beta	gnl|CDD|238082	cd00140, beta_clamp, Beta clamp domain. The beta subunit (processivity factor) of DNA polymerase III holoenzyme, refered to as the beta clamp, forms a ring shaped dimer that encircles dsDNA (sliding clamp) in bacteria. The beta-clamp is structurally similar to the trimeric ring formed by PCNA (found in eukaryotes and archaea) and the processivity factor (found in bacteriophages T4 and RB69). This structural correspondence further substantiates the mechanistic connection between eukaryotic and prokaryotic DNA replication that has been suggested on biochemical grounds. .	1.44523e-98
NZ_CP009241.1|WP_081965689.1|1049621_1050296_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	5.55416e-79
NZ_CP009241.1|WP_038586339.1|1061675_1062071_+|MerR-family-transcriptional-regulator	gnl|CDD|133398	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators. Helix-turn-helix (HTH) heavy metal resistance transcription regulators (HMRTR): MerR1 (mercury), CueR (copper), CadR (cadmium), PbrR (lead), ZntR (zinc), and other related proteins. These transcription regulators mediate responses to heavy metal stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.04891e-34
NZ_CP009241.1|WP_038586327.1|1055894_1056932_+|ABC-transporter-substrate-binding-protein	gnl|CDD|223787	COG0715, TauA, ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components [Inorganic ion transport and metabolism].	3.19504e-25
NZ_CP009241.1|WP_038586341.1|1062071_1062779_-|FAD-dependent-thymidylate-synthase	gnl|CDD|376804	pfam02511, Thy1, Thymidylate synthase complementing protein. Thymidylate synthase complementing protein (Thy1) complements the thymidine growth requirement of the organisms in which it is found, but shows no homology to thymidylate synthase. The bacterial members of this family at least are flavin-dependent thymidylate synthases.	4.7004e-44
NZ_CP009241.1|WP_038586345.1|1063021_1063798_+|Cof-type-HAD-IIB-family-hydrolase	gnl|CDD|319819	cd07517, HAD_HPP, phosphatase, similar to Bacteroides thetaiotaomicron VPI-5482 BT4131 hexose phosphate phosphatase; belongs to the haloacid dehalogenase-like superfamily. Bacteroides thetaiotaomicron VPI-5482 BT4131 is a phosphatase with preference for hexose phosphates. In addition this family includes uncharacterized Bacillus subtilis YkrA, a putative phosphatase and uncharacterized Streptococcus pyogenes MGAS10394 a putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	3.82071e-84
NZ_CP009241.1|WP_038586320.1|1052334_1053138_-|AAC(3)-family-N-acetyltransferase	gnl|CDD|376807	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase. This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.	1.67912e-105
NZ_CP009241.1|WP_038598622.1|1053530_1053902_+|DUF2294-family-protein	gnl|CDD|378372	pfam10057, DUF2294, Uncharacterized conserved protein (DUF2294). Members of this family of hypothetical bacterial proteins have no known function.	9.14196e-11

Protein sequences

>NZ_CP009241.1|WP_038586322.1|1054029_1054818_+|ABC-transporter-ATP-binding-protein
MKAKIEISGVSKWFRRDGKEIIAMQETNLSIEEGRFVSIIGPSGCGKSTLFNIIAGLMPPSTGRVLADGEDIIGKTGHVGYMLQKDMLLPWRTILDNIILGMEIRGVPRKEAVARAQPLMDRYGLKGFGSHHPAELSGGMRQRAALLRTLLYDRDIILLDEPFGALDAQTRLTMQNWLLEIWEDFRKTVLFVTHDIDEAIYLSDDIYVFSGRPGRIISKISVDMPRPRHKEDTVSASFMELKAHLLDLLSGGGSEEPAAHIS
>NZ_CP009241.1|WP_038598622.1|1053530_1053902_+|DUF2294-family-protein
MASAGQWKQDILRIYNEINKRMFNAGVKQQKVDFVGNKIIILSINSRVPVLKVLDTHDASASREINLVLHEVFKRQIKQAFMDEFQLNIKAVLKDYDVETEYSGTIIILEKDLEHYLNVTLEL
>NZ_CP009241.1|WP_038586320.1|1052334_1053138_-|AAC(3)-family-N-acetyltransferase
MTELQETRAILTKEDLIHQFKGCGVAAGQTLFVHASLSKLGFVVGGAETLIRALLEIVGEDGTLVMPSQTWKNLDPSTGVHWQEPAEWWPVIREHWPAYDKEVTPAIGMGAAAEMLRKWPGAQRSDHPARSIAAVGRHAAYITADHDLSNIFGAGSPLDKIYQLNGYVLLVGVGHDRNTSLHLAEARADFPGKHMVDESSAVLVDGKREWLTYSTQAVDDSDFVTLGNEYEQEINLKIHHIGNAEIRLLAQRPLVDWATDWMGKFRA
>NZ_CP009241.1|WP_038586318.1|1051774_1052302_-|hypothetical-protein
MTIQSIFIMVLNLTYCVIIPWFLYYAYRQYKANRSAAGQIRVYDPARLNPHKLLLVVTLLYVSTIVVLWLLYMFKVSHVIEDHWFSYVFMLVLPVVANHDRVLMYIGEYGISQEGNVIPWEFISYYEFGKLNTVTNRLLLEIHTKDNVIRGLLPSESQEEIRQFLEENKIQSKPA
>NZ_CP009241.1|WP_038586315.1|1050306_1051680_+|HAMP-domain-containing-histidine-kinase
MKTWTFSRKVSASIALASLMVAIVLSGFVYIMFSQWTEGQEVNLLEAKLRQFELQIGEVSFLPSLLKPGIGKGSGAAAVLKPDLSSFAADLDKGQRLQMLDSKERVLAEAGIGGVDKAVRYKAESDMALPAYGSVKLRLTDSGYSRTATAVREVGRILLFGLLIAAGIAVVAGWIVARSALKPIRSMIGEVQSIGANNLSRRLQLPAARDELYELGATFNGLLHKLSVSFDQQRRFVADASHELKTPLAIIEGHTHMMQRWGKKSPDVLEESLAFMMDETRRMKELIAQLLLLAETEEPLPDVAGDGGCDLKATLNELLPQTVHVNSEVKLCYEEERSGEALLIRMPASASYQVLRNIVENALKYTPEGGTVSLEHFIENGQVIVSVSDTGMGISSQQLPHIFDRFYRTEGSRNRTQGGSGLGLAIAKAIMERYGGSIVIESTPGQGTKVTLRFVQG
>NZ_CP009241.1|WP_081965689.1|1049621_1050296_+|response-regulator-transcription-factor
MKERVLIIEDEMAMVRLLELELSYEGYETTIASDGPDGVDKALSESFDFILLDLNLPGINGIEVCKRIRAAKQTPIIMITARDTVSDRVRGLDTGADDYVPKPFAIEELLARMRSVQRRLQTKETGDMLSAKDLTLSVASHRVSRAGRDIELSQREFELLHCLLLHKNRLMHREALLNLVWGYSYEGETNVVDVYIRYVRMKVDEGFGEKLIHTVRGSGYILRD
>NZ_CP009241.1|WP_081965688.1|1048562_1049597_+|DUF4097-family-beta-strand-repeat-protein
MTMKGSILKRLMKCLLAVLSLVMVLIYTGRGGPGLIFARQLSEADFKTTPLVRAKATAAGFSFDKGMTSISLAKNIQSVAIKNRNGSIEIKQGSGSTIEIHTTVVVDQAGEKEASAVAEKTELRVKEGKVLDIEAYSERYGRSHHKEASIHLTVTLPKKLAADLQANVSNGNISLSKVLSVGRVKLSSANGNVDAKGIGNNISLRSDNGTIHVSDAKQAVQATVMNGDIVANQIAGPLGMETMNGNLSSKEASSTIEAVSSTGNIRIESRKVGGNWEVSSNVGNVYLAWPGSAEVEVDGKTALGEPQTDFPLAVKNNHVTGTIGKGTYRIEASSMAGLSLMKTR
>NZ_CP009241.1|WP_038586310.1|1047765_1048419_+|hypothetical-protein
MKLNNKKLIIIDGMPGSGKTTCATMLSDQLSAWNVTNRCILELEDNHPLFIQGYKFSSFEDEAQADLFIEGLQALFRAFVQDRLASTQDITIIESVLFQDAINCAYHMGMNHDKLLNFSLALQEILSPLEPLLIYFYQVNVEGQWRFICSVRGNEWGPVALHTDDDFKEAAELWGGSQAFVRAIVDSWAIPKLIIENQDYLWDEYADRINQFIRDNL
>NZ_CP009241.1|WP_156130812.1|1047512_1047668_+|hypothetical-protein
MRTKDSYTHPMLEIAASRYSMSSGQLRYLGGSQNMVSVFSAITTGMNSSAA
>NZ_CP009241.1|WP_038586304.1|1046388_1046799_+|YjdF-family-protein
MKLTVYHDGQYWVGVVEQEDQGKLKAARYIFGREPKDEEILHFVREEMWRLLGGLSQEVAVKLSDTKKVNPKRLARQAAYELSKNGVSTHAQKAMNLEYEKNKREKQTCSNQQREAMKARIRELKEKKAKEKHRGH
>NZ_CP009241.1|WP_038586324.1|1054963_1055851_+|ABC-transporter-permease
MESVQKKGYVIHKLEASGNSAVKPDKRQAEPFIQDEEAVKRRTGRIISIGRLSVALLVVLCWELFTRIGWMDSYYWSSPLRILSTTWTQITEGTLLEDIAYTSSSTILGFIGGTLLGSLLGLSFWWSKRFAGISEPFLILLNAMPKLALAPVLVILLGIGFFSKVALAFAMTVVVAALSAHSGVQSVDKDMEKLMYSLGAKRHQVFTKVVIPWAMPWMISSLRINIALSLAGAIVGEFIASSHGIGRMVIYAGTILDINLVWVGVVVLSVLSMVMYAGVVLLEKWLSKGYGMKKA
>NZ_CP009241.1|WP_038586327.1|1055894_1056932_+|ABC-transporter-substrate-binding-protein
MKLKKVKLSAVLLLVSSIILLAGCSNKESAEAAAGKEGLKKLVIAEPLHYTGYLPLYVAQREGYFAEEGLEVEMLQATGGTHVTSVVSGDAWGVIGGPESNALANTGNSDPIISVSNVVNRANVYLMAKKGTAPAGSSDEELKAFLQDKKINAGRHGGTPNLLTQYLLLELGLDPQKDVRLLEPADGSTVVAMVQQGAADIANGAEPQISDGMDKGVWDEPFYKFHDMGDYAYSVLSVKKSTLEKDPETVQKAVNAVVKALKAIQEDKTMAMKVLKAEFPTLSDTAAQAALDRAYEDQLWSPDGIISEEALDKDMNVMIKTGIYKGEYTYDGLVDMQFVKKSAEK
>NZ_CP009241.1|WP_052091821.1|1056970_1057609_+|cysteine-hydrolase
MELTADLIMPDRTALVIVDVQNDYCHPDGALVAGGNDVAGVKAMMPRLHSLIDAARAHGVPVIFIQTFHEKATDSPVWVSRSGRGSLGVCRKGSWGAGFYEVAPLPEEIVVNKHRYSAFINTRLDSVLRSLRIETLIMTGVSTNVCVESTARDGFMLDYHIVLAEDACASYSRAAHEMTLENMKGYFGVVASVAEVEENWNIWHQSALQNAL
>NZ_CP009241.1|WP_038586330.1|1057605_1059063_+|MFS-transporter
MSFSATTSKRVVNPSAVKIVICLGAFLSNLSAGMFNIALVDISADLRIPVASAQWVVSIYLLVISVLLPVMGRLGDRLGRRKVHNFGLFAFAAGALGCALAPNAIMLLGFRVIQGVGASMYQATNMALIVSVFPAEQRGRALGLMSTFVAAGSMAGPGLGGFLIQWFSWESNFWLLAAVAGGVGLLAERLIPQDTETAGGRLDLGGAVWFAACLSSLMIALDLGGRSSFLSLPVLLLFAASAVTAAGFAAHARSSRKGNTDEAAATTQSRRSADSGFGLFADRNFAAGIVITVITYMAAFAAQLALPSLLRLSGAEPALVGLIMIGYPLALVVTAPISGGFADRKGPLGILTAGLLLMSVTLLALGFAAPALGAGAMILPVVLLGCSMGMVTSPNTSIVMGLAKKSQLGRVSSVLALSRNIGMMFGTAAGGLVIGGGTSGSGGGMYMAVFLVCAAGVGISCIWLLYSLRRSNKDKGVEQLPWSPR
>NZ_CP009241.1|WP_038586333.1|1059310_1059544_+|CopG-family-transcriptional-regulator
MSDNAIKIGVSNKDGQLGFLSGRGGLREGAGRKGIGCTKKVSLTLPEELWNKLEADCTATALSRSEMIRNIITAYYS
>NZ_CP009241.1|WP_038586336.1|1059573_1060710_+|DNA-polymerase-III-subunit-beta
MLVNVTKESLLHALQHVLKAVVANSPNPILSGIHIQAYEKALVFTASNTSMTIQYRVPEDKDSMNVQRTGGIVVPARYLSEIIRRLHAGWIAFESEEPFILSITSGDSHVRLCGLDPAEFPPVHSPSTDAEPACKFQIQNDVLRSAIRQVCVAASTSDSRPVLTGVSFEFTGENLSLMATDGIRFASRTLHTGYNINNGTNVIVPAKNINEIVKMLSDDKAATEIAVSRHQISFTANELHVQSVLIEGVFPSAVKNVIPQSCKSELLIGPYGFLQAVERVSVLAGGNIIRLTAASGKLVLLSGTSDIGEVRDEINLEAMEGDDFTIALNGRFLLDILRCLDSGSLRVRYTGKESPVVILTTDPLSPALFLITPVRTHD
>NZ_CP009241.1|WP_038586339.1|1061675_1062071_+|MerR-family-transcriptional-regulator
MEGMTRGELAKLSGVSMATIRYYEDSGILPVPGRVANGYRIYTEDYLVKIKFIRDAKSLGYSLKEIREVLGMLGQKMDAETLKGRVRNKILEIDERIAAMRSIQSMLAGLLETPQEDIHNYLQSFRIHDKE
>NZ_CP009241.1|WP_038586341.1|1062071_1062779_-|FAD-dependent-thymidylate-synthase
MLLNIDVLDKGYVRLVNHMGSDLTVVNAARVSYAKQSDALTEKDLRLIQFLAREGHTSPFRHAVIQYEIYAPLMVARQWWKYVIGSAHYEGTGDSLEAWNESSRRYITEEPAFYTPAAGQWRSAPANSKQGSGDIVAWELGEKYTRELMNYVDLGIQKYEAALADGICAEQARLFLPAYGLYVRWYWTASLQSVAHFLNQRLEHDAQKEIQDYAKAVLEIVKALFPVTIDELLSK
>NZ_CP009241.1|WP_038586345.1|1063021_1063798_+|Cof-type-HAD-IIB-family-hydrolase
MYKIVFFDVDGTLLSEVDGCMPSSTKEALGTLAAKGIKVVVATGRPYSLCEEFRGLGVDTIISANGALVQSNGEVIHKSLLKSETVRELSVFAGNNGHGLSYFTDLLTMNGLGFEDDRMKRALQETLSLTEYPETMGSLSEEIYCMCLYADEHEAQKYIEQFPRLRFVRFHGYVMNVLEETEVSKSTAIRKVLEHFGLSPAEAVAFGDGGNDIDMLEYVGLGIAMGNGGEQLKQKADFVTKKASEGGIAYALQKYGVI
>NZ_CP009241.1|WP_038586347.1|1063941_1064127_+|hypothetical-protein
MWVDRSAIADQHVTASTQEVMRHYLETGIHNNHVYVGSLHSFHGEPAMGWNVLEDWEGNNL

Crispr_ID: NZ_CP009241_6

• CRISPR_ID: NZ_CP009241_6
• CRISPR_location: 1353096-1353169
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_6

Consensus_repeat	Method
TAGTTGTATTTCGTACAGCTAAA	CRISPRCasFinder

spacers of NZ_CP009241_6

>6.1|1353119|28|NZ_CP009241|CRISPRCasFinder
GTGACTCTCCAGGGCCTGATTTTACTTT

CRISPR arrays and Neighbor proteins around NZ_CP009241_6

CRISPR arrays

The CRISPR arrays of NZ_CP009241_6

>merge|NZ_CP009241|6|1353096-1353169|CRISPRCasFinder
TAGTTGTATTTCGTACAGCTAAAGTGACTCTCCAGGGCCTGATTTTACTTTTAATTGTATTTCGTACAGCTAAA

>NZ_CP009241|6|5|1353096-1353169|CRISPRCasFinder
TAGTTGTATTTCGTACAGCTAAA	GTGACTCTCCAGGGCCTGATTTTACTTT
TAATTGTATTTCGTACAGCTAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038586885.1|1341528_1349367_+|hypothetical-protein	unknown	unknown	gnl|CDD|377038
NZ_CP009241.1|WP_038586905.1|1359699_1360668_+|DUF4367-domain-containing-protein	unknown	unknown	gnl|CDD|379540
NZ_CP009241.1|WP_052091853.1|1357623_1358373_+|DUF3600-domain-containing-protein	unknown	unknown	gnl|CDD|289015
NZ_CP009241.1|WP_038586874.1|1334658_1335108_+|DUF4362-domain-containing-protein	unknown	unknown	gnl|CDD|372994
NZ_CP009241.1|WP_052091854.1|1358804_1358984_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038586882.1|1340372_1340711_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038586891.1|1350375_1351527_+|winged-helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|294013
NZ_CP009241.1|WP_038586880.1|1338058_1340383_-|carboxypeptidase-regulatory-like-domain-containing-protein	unknown	unknown	gnl|CDD|379297
NZ_CP009241.1|WP_052091855.1|1359136_1359703_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|131997
NZ_CP009241.1|WP_052091851.1|1340694_1341198_-|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|181835
NZ_CP009241.1|WP_038598731.1|1335116_1335605_+|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|366181
NZ_CP009241.1|WP_038586903.1|1357049_1357634_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|183582
NZ_CP009241.1|WP_038586888.1|1349527_1350205_+|YjgB-family-protein	unknown	unknown	gnl|CDD|372945
NZ_CP009241.1|WP_052091852.1|1351610_1352885_+|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP009241.1|WP_081965701.1|1358606_1358768_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein	unknown	unknown	gnl|CDD|378175
NZ_CP009241.1|WP_038586897.1|1354152_1354932_-|TatD-family-hydrolase	unknown	unknown	gnl|CDD|238635
NZ_CP009241.1|WP_038586877.1|1336072_1337914_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223562
NZ_CP009241.1|WP_038586894.1|1353521_1354091_+|histidine-phosphatase-family-protein	unknown	unknown	gnl|CDD|366010
NZ_CP009241.1|WP_038586899.1|1354985_1356119_-|hypothetical-protein	unknown	unknown	gnl|CDD|377924
NZ_CP009241.1|WP_038586901.1|1356389_1356806_+|MarR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|197670

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038586885.1|1341528_1349367_+|hypothetical-protein	gnl|CDD|377038	pfam03442, CBM_X2, Carbohydrate binding domain X2. This domain binds to cellulose and to bacterial cell walls. It is found in glycosyl hydrolases and in scaffolding proteins of cellulosomes (multiprotein glycosyl hydrolase complexes). In the cellulosome it may aid cellulose degradation by anchoring the cellulosome to the bacterial cell wall and by binding it to its substrate. This domain has an Ig-like fold.	8.03649e-27
NZ_CP009241.1|WP_038586905.1|1359699_1360668_+|DUF4367-domain-containing-protein	gnl|CDD|379540	pfam14285, DUF4367, Domain of unknown function (DUF4367). This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 229 and 435 amino acids in length.	2.68579e-11
NZ_CP009241.1|WP_052091853.1|1357623_1358373_+|DUF3600-domain-containing-protein	gnl|CDD|289015	pfam12207, DUF3600, Domain of unknown function (DUF3600). This family of proteins is found in bacteria. Proteins in this family are approximately 230 amino acids in length. This domain is the C terminal of the putative ecf-type sigma factor negative effector.	9.48622e-08
NZ_CP009241.1|WP_038586874.1|1334658_1335108_+|DUF4362-domain-containing-protein	gnl|CDD|372994	pfam14275, DUF4362, Domain of unknown function (DUF4362). This family of proteins is found in bacteria. Proteins in this family are typically between 93 and 146 amino acids in length. There is a conserved IRIV sequence motif.	1.07603e-18
NZ_CP009241.1|WP_052091855.1|1359136_1359703_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|131997	TIGR02952, RNA_polymerase_sigma-70_factor_ECF_subfamily, RNA polymerase sigma-70 factor, TIGR02952 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is found in a limited number of Gram-positive bacterial lineages.	1.73179e-56
NZ_CP009241.1|WP_038586891.1|1350375_1351527_+|winged-helix-turn-helix-transcriptional-regulator	gnl|CDD|294013	cd00383, trans_reg_C, DNA-binding effector domain of two-component system response regulators. Bacteria and some eukaryotes use two-component signal transduction systems to detect and respond to changes in the environment. The systems consists of a sensor histidine kinase and a response regulator. The former autophosphorylates a histidine residue on detecting an external stimulus. The phosphate is then transferred to an invariant aspartate residue in a highly conserved receiver domain of the response regulator. Phosphorylation activates a variable effector domain of the response regulator, which triggers the cellular response. This C-terminal effector domain belongs to the winged helix-turn-helix family of transcriptional regulators and contains DNA and RNA polymerase binding sites. Several dimers or monomers bind head to tail to small tandem repeats upstream of the genes. The RNA polymerase binding sites interact with the alpha or sigma subunit of RNA polymerase.	1.67087e-26
NZ_CP009241.1|WP_038586880.1|1338058_1340383_-|carboxypeptidase-regulatory-like-domain-containing-protein	gnl|CDD|379297	pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain.	4.64057e-05
NZ_CP009241.1|WP_052091851.1|1340694_1341198_-|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|181835	PRK09415, PRK09415, RNA polymerase factor sigma C; Reviewed.	2.43584e-33
NZ_CP009241.1|WP_038598731.1|1335116_1335605_+|GNAT-family-N-acetyltransferase	gnl|CDD|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.03222e-15
NZ_CP009241.1|WP_038586903.1|1357049_1357634_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|183582	PRK12543, PRK12543, RNA polymerase sigma factor; Provisional.	2.42763e-64
NZ_CP009241.1|WP_038586888.1|1349527_1350205_+|YjgB-family-protein	gnl|CDD|372945	pfam14172, DUF4309, Domain of unknown function (DUF4309). This family includes the B. subtilis YjgB protein, which is functionally uncharacterized. This is not a homolog of E. coli YjgB. Expression of B. subtilis YjgB is regulated by the alternative transcription factor sigma-B. This family is found in bacteria, and is approximately 140 amino acids in length.	7.23283e-54
NZ_CP009241.1|WP_052091852.1|1351610_1352885_+|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.32738e-47
NZ_CP009241.1|WP_081965701.1|1358606_1358768_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein	gnl|CDD|378175	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein. Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure.	0.000167078
NZ_CP009241.1|WP_038586897.1|1354152_1354932_-|TatD-family-hydrolase	gnl|CDD|238635	cd01310, TatD_DNAse, TatD like proteins; E.coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.	3.34595e-45
NZ_CP009241.1|WP_038586877.1|1336072_1337914_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl|CDD|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	5.59417e-162
NZ_CP009241.1|WP_038586894.1|1353521_1354091_+|histidine-phosphatase-family-protein	gnl|CDD|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	1.33326e-34
NZ_CP009241.1|WP_038586899.1|1354985_1356119_-|hypothetical-protein	gnl|CDD|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	5.36131e-06
NZ_CP009241.1|WP_038586901.1|1356389_1356806_+|MarR-family-transcriptional-regulator	gnl|CDD|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.54459e-17

Protein sequences

>NZ_CP009241.1|WP_052091852.1|1351610_1352885_+|MFS-transporter
MEASTKQGTSLLHNKVYMRVYSAFATATFGDWFDTLAIQVLVGYRWQASPLMLALIPVAIALPSVLLGSVAGVAADRMNKLKLMRLCDLLTAVLTVLVLFAPSMVWLLPLLSLRAAVSTLNVPAQQSMTRSIVREDQLLQATSLNGIVNQGSKIAGPLLGGLALSVLTPQWCILLNAIFRVCSYLLLLSVRNIPAGEANLVSESPEERVPLRTMWKEGWSFMLHSRVLLNTMLFGLTGALAIQMIDFQFTSLFRMVSPTNESLLGWMVAASGAGAVLIILVMNKLKLGTGYGWRLGTGYVLIGGSVLGLGLLQPGASVIWVLLLGFVLGIGNGMFIVAFNYCLQKETPPHMTGRVFGIQSTILGAVMIVAPLLGGLLVELAGPGQIFVNFGIVQAVLGLTGIVFGRVLWPVAKQERVTSVEQVS
>NZ_CP009241.1|WP_038586891.1|1350375_1351527_+|winged-helix-turn-helix-transcriptional-regulator
MHLELNGSEYKVSAEGMTIELLPKEFALLQFLYHNRGRTFSREQLLDKVWPLEYPVERTVDDHIYRLRKKLRGLKGLDIKTVRGFGYSLAVPGLGSVMITPTTHDPELRDTMRDVFGKFHVYGQGKSMLTLARQQDILGYELDPHYSMVIHFVQGDLEWLLYTKEVPLKDRLFYLLLFYFFSGDPKAKLAYCEQVIRKKLLPPPDQVELEILTILDLFTLAGQPERALERLERSYQVIAEPGYENFIPVTMIVELFVHLVAGTGDAELERLDEAIGKVLLDKPFLREIGSYKIVKGLWRLRNKQWREAENLLDEGLQVLEMTGFVPLPLHALYRIYHFCRMFPPPQALQHKYDNQFAAKLEELGFDRLAQSLEDVLQQILKAL
>NZ_CP009241.1|WP_038586888.1|1349527_1350205_+|YjgB-family-protein
MTTTFRAIAGIFILAGVIGLTACDSSDQQAAASASPATAAGTDVPATSQPEASASSSPTEEPAAAASPSSGAGGSSAAAPQDSSKQLEELLQLAKQGKVPGVEYAAHSGLIDEVEAAWGEPDTKDSAGKGMYSVYSDKHVVFGFNKGSRIFDVRSSAAELQRLTLKQIEEVLGKPGSTAVNGSDKIYIYQAGKEYQLKFIIPESSGTVDHISVFSEQDAVNNMAG
>NZ_CP009241.1|WP_038586885.1|1341528_1349367_+|hypothetical-protein
MMKRGLSYFSVGTMLLGVLTLFLFHPQAVNAANPAPDSFTLKSYDNLPSSAMSDLAYGNNTYIAVGYYGAIIKSADAETWVNVKTKADITYTGVADPSSFTFNGVAYGNGLFVVGGSAGVILTSPDGTTWTQRTSNVSKGIGNVEFLQFNGNSAFYATTEGKYLTSADGITWTSVVPTGLASSDYVTRITVGNNGSRLAIGAGNGKIYSTTNGTTWTVAQPSGPSGPSIGTNMITWMKDRYYISDPLAYIWTSTDLSTFTLLGSPFKQNSSQYNNQMFNGFYDGTKYYLFGYEAPNYGAVYTSTNGTTWTMQPFKNYFVTQSSMFVNGKYFRLGNEGMMVSPNGSDWSYKWGGAFYEVIHDGSQYVAVGKEGGDGAIWTSGDLTSWSKAALPSRTGTFTAAAYGNNKYVAIGDVSQTTAALATSTDGSAWTVRSSINDSTSLTDIAFGNGKFVAVGAGSGSVPKIKTSVDGVVWNEPVLPVQSIDALYTVTYDNNQFIALGYGYDSSGNVDQASIWTSTDGDTWVNHSSAYPNHTEAFNNIVYDGSKYVLTGYNSTTYEVFSRTSVDLSAWSAPTLTGTYSFYGASTMMGQKGNNIYMVAIDSNNVPGIYYTGDQGSTWQDAGVDLSDIDINAIYALMELNGGIVISGNSQLVMSATGSLAQVDAPTANPTGAGGAVASGTAVTLSSATSGAVIYYTTDGTTPTSSSTLYSGAITLTSAKTIKAIAVKPGMTDSAVLSESYTIMAQVDAPTASPAGGEVASGTAVTLSSATSGAVIYYTTDGTTPTISSTLYSGAITLTSAKTIKAIAVKPGMTDSSVLSESYTIMAQVDAPTASPAGGEVASGTAVTLSSATSGAVIYYTTDGTTPTSSSTLYSGAITLTSATTIKAIAVKPGMTDSSVLSESYTIMAQVDAPTASPARGEVASGTAVTLSSATSGAVIYYTTDGTTPTISSTLYSGAITLTSAKTIKAIAVKPGMTDSTVLSESYTIMAQVDAPTANPAGGEVASGTAVTLSSATSGAVIYYTADGTTPTSSSTLYSGAITLTSAKTIKAIAVKPGMTDSSVLSEGYTIMAQVDAPTASPAGGEVASGTAVTLSSATSGAVIYYTTDGTTPTISSTLYSGAITLTSAKTIKAIAVKPGMTDSAVLSESYTIMAQVDAPTASPAGGEVASGTAVTLSSATSGAVIYYTTDGTTPTSSSTLYSGAITLTSAKTIKAIAVKPGMTDSSVLSESYTIMAQVAAPTANPAGGEVASGTAVTLSSATSGAVIYYTTDGTTPTSSSTLYSGAITLTSAKTIKAIAVKPGMTDSTVLSESYTIMAQVDAPTASPAGGAVASGTEVTLSSATSGALIYYTTDGTTPTSSSTLYSGAITLTSAKTIKAIAVKPGMTDSSVLSESYTIMAQVAAPTANPAGGEVASGTAVTLSSATSGALIYYTTDGTTPTISSTLYNGAITLTSAKTIKAIAVKPGMTDSTVLSESYTIMVQVDAPTASPAGGEVASGTAVTLSSATSGAVIYYTTDGTTPTISSTLYNGAITLTSAKTIKAIAVKPGMTDSAVLSESYTITAQQVAAPTANPAGGEVASGTAVTLSSATSGAVIYYTTDGTTPTSSSTLYSGAITLTSAKTIKAIAVKPGMTDSSVLSESYTITAQQVAAPTANPAGGEVASGTEVTLSSATSGALIYYTTDGTTPSSSSTLYNGPITLTSAKTIKAIAVKPGMTDSTVLSESYTITAQQVAAPTANPAGGEVASGTAVTLSSATSGAVIYYTTDGTTPTSSSTLYSGAITLTSAKTIKAIAVKPGMTDSSVLSESYTITAQQVAAPTANPAGGEVASGTEVTLSSATSGALIYYTTDGTTPSSSSTLYNGPITLTSAKTIKAIAVKPGMTDSTVLSESYTISTANNSSISPKTASFDKNTGKQADVVITMMLNGNNLTSISNGVAYLAAGSDYTVSGNTVTLQKDYLATLAEGTTSLTFNFTAGAVQTLVITVTDTSVPIPGVPFLQSAFAGNGEINLIWSPVTGSIGYKIFQRLSSSEYGNEIATVSGSVYSYKAAGLNNGTAYYFVVKAANEVGDSAASNELNATPKTVPGAPTDITAVAGNGQAVVSFTAPAETGGSTITGYEVTASPGNIVGVGTTGPITITGLTNGTAYTFTVKAINGAGSSASSALSNEVTPIAPSVPSGGGGNETPPVITTPVTNDGVDVFVNGKVERAGTATTSIVNGQSVTTVIIDQKKLEERLAAEGQGALITIPVISSSNIVIGELSGQMIKSMEQKQAVLEFKSGNATYTLPAAQINIESISTQLGASVALEDIKIQIEIAKPTADTLRIVENSAAAGEFTLAAPPLNFVIRAQYGDTTVEITKFNAYVERMIALPDGVDPNRITTGVVVEPDGSVRHVPTKVAKIDQQYFAIVNSLTNSTYSIIWHPLEFKDMDGHWAKDIVNNMGSRMIIDGVGNGAFNPAAEITRAEFAAIVVRGLGLKLENGTGAFSDVKASDWYSSSVQTAYAYKLINGFEDGNFRPLDKITREQAMTMIAKAMEITALKDKLQNKEASELLSSFTDAGSVSKWAVSSAADSVAAGIVSGRTSTRLDPQASITRAEVAAMIQRLLQRSDLI
>NZ_CP009241.1|WP_052091851.1|1340694_1341198_-|sigma-70-family-RNA-polymerase-sigma-factor
MELYGDMLLRTACLLLKDQQSAEEAVQDTFIQAYAKMAQLQDPQRLKAWLVSIVVNRCRMKQRTWSWRSIFPAAESGQWMEESGASAGAEEHFMVEWHHVRLVEAVRSLDYIYRESLTLYYFHEMSIREISAELNTAENTVKSRLARGRMLLKQTLEKEGISYEYGS
>NZ_CP009241.1|WP_038586882.1|1340372_1340711_-|hypothetical-protein
MNTDREQIKQRLDEELRPVTFTGHEQVLRQTHPPTGRARLLALWNKELEIPLKAVGAFTAILVTGALLLYSPHTGTETQQAVQQPGQRELIKAGGNMYWKDIYERAVKRYEN
>NZ_CP009241.1|WP_038586880.1|1338058_1340383_-|carboxypeptidase-regulatory-like-domain-containing-protein
MKIKLKVKHLVLFVLLPLSLLAIVAVVLPFSRSGTGTPALTASTAKDDRIKLLSTLNGSTGSKRMELIRTKIIEPGNLDTSYSFNVYIGASMTQSSQSENEETHSPLLPGDRIKFLQEYIMQGPADYSMLNAVKQLLYEYDVIGTMDDEADQALAAAVERISSPSSLAKELTLIRAERALNSGNFTAADDLLKQADSPVQNNDLEMDARTAWLGGRLLFAQGKSREALTLVTTALEQYRVGWKELKKEYGGDELQSIHSGESGNGSSAEAFEQGTTDSDIRLIALRTALQSALDMGIHTPATLQGTLSKSDGTPVSRAGIFLRAESEVHHSVMRNTEPYQIVTDESGHYQFSGVIPGFYQLQIGVSFAQIDGWAWPVQSDDWIEIKPGDDLTENIVLQPLLELKSPVNSQVVTGSSVKFEWEPVKTAAYYNLSGTVNIEDGSFTTIVRQNIKDNKVSIPAEELYDAGGFSISGGADDWKTIEPSSLLGFADPEGRFSWTIDAFDEQGKLLTRSNGYRLNDDTVGNLPFFYYKSRTLTAADKLVKDKKLEQALQAYRRDYAANPQDAHALKMLTHLLTAKASYAKDKQAEDATIPLLIQLVQLRPDANFTFSLVDHYFDHADWVNYNKYYSMYNELIQEKPSSYEMAIHATALMFQGQLAEARKQFAVALEEDLSHRFIGSYLAAELAAGQPLTSVLELAKRYPEHGYRTSGYRWPLLILKLQSEREKQPEVFDKLLQEKLASYAAGESEALQQWTTEGEPSALKNFMKAVLEVS
>NZ_CP009241.1|WP_038586877.1|1336072_1337914_+|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MTKTLIKAKNIRKEWNGIALFEGVSFEITEGERVLLFGRNGIGKTTLLQGLLGRLAFEEGSVSYGLPAEEWGVLDQQLEISVEMSVLEYVFSGWKELAALKGRLETLGKQLQDTEGADAEAVAKYGEIYESYLQLDGYGWEAKVEKCLRQLKLDPALWGQPYRLLSGGQKTRVQLAALLARQPKLLVLDEPTNHLDNETMEWLEEWVRSYPGTVLYVSHDRTFIDRTATAVLELTPQGCRRYPGAYREYREQKALEARTLEGKYKKQEQEKEQLLESIRRYAEWFQQAHRAAGQNDFLRSKSKKNVSRLHAKEASLARLEKNRVELPKAAPKLSMKLESEAFQGDALLSLHNIRCAYGDNPALLEDFNLSLRRGDRLAVLGPNGAGKSTLLKLIAGVTQPSGGEVTQHPRTQIGYFAQELDHLDPESTLLDSLLELPGMTQTEARTILGCFLFPREDVFKHIGDLSMGEKCRVAFLRLYFGRGNLLVLDEPTNYLDIDTRERVEEALAAYPGGLVIVSHDRYLHTKVANRLLLLEHGRRPQFFPGTYEEYTAKERGRVLTPEEQTREGELQLLEMSLARLMRSDALETEEENRELMAEIVNLRKAIGTLLEEN
>NZ_CP009241.1|WP_038598731.1|1335116_1335605_+|GNAT-family-N-acetyltransferase
MLNLTSRALAQEDLESICAFVQNAEEVFCVSPKFRYPLTAEQILKRLENRYSPTVIVSGDAPEPLAYANLYDKDEKSHTIWLGNVIVSPSYRGTGAAAYLIQTMMDIAKQELGVRTMKLYCHNTNTRALLFYCKQGFSPCGSKVLVKPDGEKLVGIAMQKEL
>NZ_CP009241.1|WP_038586874.1|1334658_1335108_+|DUF4362-domain-containing-protein
MKALFTTLYVIICTAMLLACSRSYDPDEAAERGDVVDLHGMITNAERLDEFLGNIEENHSDKVRVTQYTEEADPIYIDLAYNGETVKFKYDNTHDEYAKGKVRTSVCKGISKEVTDKKIEYKLTGCSGKNSDLADSFSLRIQGKQLSEE
>NZ_CP009241.1|WP_038586894.1|1353521_1354091_+|histidine-phosphatase-family-protein
MSTFIYMVRHGESPKTGGDERERGLSPKGEADARYVTAKLRSEGIHAFYSSPYVRAVQTIADLAEELGQEIVPDEALKEKIWMEGNRPLPEDELYPALRKMYADADFALPGGESNNECQDRAVQVLKDILRKHPGENIVIGTHGLVMALMMGYFSEDYELEFLMQTTKPDIYRMEFTGEKLSGVERIPL
>NZ_CP009241.1|WP_038586897.1|1354152_1354932_-|TatD-family-hydrolase
MIDAHIHLEQYNDTELESMLLELPGLDIESLIAVSMNLDSCIRTQKIAALYPVQVKPAYGFHPEQPLPQETELYALLDWIERHAGEMTAVGEIGLPYYTRAEALERGEAFEMEPYIRLLDTLLGLAARLNKPVVLHAVYEDALTACDLLEKHGITRAHFHWFKGPEEVIVRMIERGYHISFTPDILYEPEIRELALRYPPKLVMAETDGPWPFEGPFAGKPTHPAMIREVAAAWGALHGYSASQAAAMLTANTARFYDF
>NZ_CP009241.1|WP_038586899.1|1354985_1356119_-|hypothetical-protein
MKKLFGAAAIALFIAGCTAASPIDTAHAASPLLLAVDGQPALTPLHPFYSGGVLYVPARVLLEYYPCQLIWDNVRKQLTLSDISSNTVLTPGSAAMQITYTQTDGSTEEMQEGPVIVKDGHNYIPADTLYDLTGAESKLENTGNTVSIVPGSVSTTVRVPKEPLAVAANNSKVKLYTALKNGDTYKGFILEVNGRKHNFNWSAPRIYNSPPELHYADVDNDGKPEAIVILTRGTGTGIVAQEVHVVKPELWKELTLPAADKAAAAAVTSSLAIDQKDVLIRLEVKGAEPAKLTLRLPGRATDNGLDYFGKEAGIGAVTYYQVEGGKLKAETSVMVGMQESIGTLMLEYKAGGKGMELGSIKFEPDAAIKPNMEPKQG
>NZ_CP009241.1|WP_038586901.1|1356389_1356806_+|MarR-family-transcriptional-regulator
MNENNVLAVIGRIHRRGNKFIERELKKHNLQGIAPSHGDILYQLFVQEYITMHQLSCYIDKDKSTITALVDKLVRMEYVQREQDQRDGRIFRLSLTAKGRELQPIFEAVSESLLAAVYEDFAPEEKQLLLGLLEKIKL
>NZ_CP009241.1|WP_038586903.1|1357049_1357634_+|sigma-70-family-RNA-polymerase-sigma-factor
MKNRAEYSQLIELTLAGSRDAYGELYEATISDVYRTVRFLVSEPSDADDVVQEIYMEVYRSLGQFDTSRPFRPWLMGVCMRQIHAYRRKGWRQLRILKKAEQRGQSMEYDFAGDVLDRLLNRGLLESVNRLPFKLKQVIILHYLQEYSQEEIAAILAIPLGTVKSRIHAALQRLRRNRKADTIKIGKVEELHES
>NZ_CP009241.1|WP_052091853.1|1357623_1358373_+|DUF3600-domain-containing-protein
MSLEHNLRQVLQEKAEGWIAPPELKGRILNGIIPGQGGRRMKKWFVATIVAAALLIPTGAYAGYNYLADSIYGSSDNLIQIGGTQQKYDELEAKLQQAKASLSEKNFTEFTSLLKEIGRFNLEIAAADGVLHPELLSSTDQKRYELLTAQLAPYFKQLKVETPGKIAETGDNNAFWDQMIAKAEQELSGDEFAEVRQLIGELKSYEAKATAQEHSVQLSEDELAQYEQLLEQLNPYLQKLGVKLKPAHK
>NZ_CP009241.1|WP_081965701.1|1358606_1358768_+|aspartyl-phosphate-phosphatase-Spo0E-family-protein
MNEIEVIQKQIEVERARLNQMEQQFGLLHPSVIKQSMLLDELINKYTKLDNNV
>NZ_CP009241.1|WP_052091854.1|1358804_1358984_-|hypothetical-protein
MVPVSPLASWMISLLYADFVAHDAFAGIALLLLLIPLFCLAGLIVLLTGIFHKKETGTV
>NZ_CP009241.1|WP_052091855.1|1359136_1359703_+|sigma-70-family-RNA-polymerase-sigma-factor
MQERALLQPFILERMQGNTETDQQFTTIFETYYKRIYNYIAYRVSCRYTAEDLTSLVFEKTLSKLDSFSGEKAPFEVWLFAIARNVVNDYYRSRKRTRLFSLDTVMELVSGKKAPEDLLLEEERNTRLNHALDKLAVKERNVVALKFGAGLKNKEIALLTGISESNVGVILYRSMRKLKSEIGSVDEL
>NZ_CP009241.1|WP_038586905.1|1359699_1360668_+|DUF4367-domain-containing-protein
MKNKDTAQRFARDMDNGVHNAGSGEWKGSGEYRELLELGQVLAEHDFSRNTDQQAVWSKVRSRAGKVQAGSRRNSSRSFKRPVMIAASLLVAFAVSGAVVKPSFAQEVLSRVLQTINLGHIIANEMDPDQIPEIPEEMKGKIYDKDGHPVVSFAQEIERGQIFTADGEPIVDFVDGKPVTQQEQDVLDKEKAAGIFSVKTLAELNKYAAFEVKLPEYLPEGIAFDHGELYTGKDGISSKYVDLIFTSEKKGIKFWMQQSYADHETAYEMSTDGKIEQVKVNGIDAVLMNSKSLDWEADGVLYSLSTQGLDREEIMRIAESIR

Crispr_ID: NZ_CP009241_7

• CRISPR_ID: NZ_CP009241_7
• CRISPR_location: 1409552-1409784
• CRISPR_type: Orphan
• Repeat_type: I-C
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP009241_7

Consensus_repeat	Method
TGTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC	PILER-CR
GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC	CRISPRCasFinder

spacers of NZ_CP009241_7

>7.1|1409585|34|NZ_CP009241|PILER-CR
ACGGTCCCTGACCTTATAGATCGGGCAGACCGGA
>7.2|1409652|33|NZ_CP009241|PILER-CR
TTGTCCGTCTTCCCGGTTGTGTTTGGGCGATTT
>7.3|1409585|35|NZ_CP009241|CRISPRCasFinder
ACGGTCCCTGACCTTATAGATCGGGCAGACCGGAA
>7.4|1409652|34|NZ_CP009241|CRISPRCasFinder
TTGTCCGTCTTCCCGGTTGTGTTTGGGCGATTTT
>7.5|1409718|35|NZ_CP009241|CRISPRCasFinder
CTGAGCAACCCATCCGAAGAGTTAATACTGGTATC

CRISPR arrays and Neighbor proteins around NZ_CP009241_7

CRISPR arrays

The CRISPR arrays of NZ_CP009241_7

>merge|NZ_CP009241|7|1409552-1409784|PILER-CR,CRISPRCasFinder
TGTCGCTCCCCGTGCGGGAGCGTGGATTGAAACACGGTCCCTGACCTTATAGATCGGGCAGACCGGAAGTCGCTCCCCGTGTGGGAGCGTGGATTGAAACTTGTCCGTCTTCCCGGTTGTGTTTGGGCGATTTTGTCGCTCCCCGTGCGGGAGCGTGGATTGAAACCTGAGCAACCCATCCGAAGAGTTAATACTGGTATCGTCGCTCCCCATGCGGGAACGTTGATTGAAAC

>NZ_CP009241|7|1|1409552-1409717|PILER-CR
TGTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC	ACGGTCCCTGACCTTATAGATCGGGCAGACCGGA
AGTCGCTCCCCGTGTGGGAGCGTGGATTGAAAC	TTGTCCGTCTTCCCGGTTGTGTTTGGGCGATTT
TGTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC

>NZ_CP009241|7|6|1409553-1409784|CRISPRCasFinder
GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC	ACGGTCCCTGACCTTATAGATCGGGCAGACCGGAA
GTCGCTCCCCGTGTGGGAGCGTGGATTGAAAC	TTGTCCGTCTTCCCGGTTGTGTTTGGGCGATTTT
GTCGCTCCCCGTGCGGGAGCGTGGATTGAAAC	CTGAGCAACCCATCCGAAGAGTTAATACTGGTATC
GTCGCTCCCCATGCGGGAACGTTGATTGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_144024341.1|1411645_1411783_-|cortex-morphogenetic-protein-CmpA	unknown	unknown	gnl|CDD|380221
NZ_CP009241.1|WP_038587005.1|1414425_1415190_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|225130
NZ_CP009241.1|WP_063848018.1|1401330_1401825_+|HIT-family-protein	unknown	unknown	gnl|CDD|223611
NZ_CP009241.1|WP_038586987.1|1408686_1408965_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038586984.1|1402974_1403703_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP009241.1|WP_038598781.1|1415942_1416848_+|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223633
NZ_CP009241.1|WP_038586999.1|1412330_1412825_+|SprT-family-protein	unknown	unknown	gnl|CDD|235290
NZ_CP009241.1|WP_052091859.1|1397316_1398288_-|S-layer-homology-domain-containing-protein	unknown	unknown	gnl|CDD|306825
NZ_CP009241.1|WP_038586993.1|1410790_1411282_+|DinB-family-protein	unknown	unknown	gnl|CDD|378981
NZ_CP009241.1|WP_038586981.1|1398912_1400892_+|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	unknown	unknown	gnl|CDD|223556
NZ_CP009241.1|WP_052091862.1|1408220_1408463_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038586990.1|1410042_1410624_-|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl|CDD|378696
NZ_CP009241.1|WP_038598767.1|1401925_1402960_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP009241.1|WP_052092460.1|1416866_1417829_+|branched-chain-amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|119323
NZ_CP009241.1|WP_038598778.1|1409106_1409280_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_052091861.1|1405887_1407993_+|molybdopterin-oxidoreductase-family-protein	unknown	unknown	gnl|CDD|239167
NZ_CP009241.1|WP_156130820.1|1413688_1413877_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038587002.1|1412817_1413456_-|pentapeptide-repeat-containing-protein	unknown	unknown	gnl|CDD|224276
NZ_CP009241.1|WP_038586996.1|1411860_1412220_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_081965706.1|1403823_1405767_+|serine-hydrolase	unknown	unknown	gnl|CDD|365903

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_144024341.1|1411645_1411783_-|cortex-morphogenetic-protein-CmpA	gnl|CDD|380221	NF033225, spore_CmpA, cortex morphogenetic protein CmpA. Members of this family are CmpA (cortex morphogenetic protein A), a small protein (37 amino acids) involved in endospore formation and frequently missed during genome annotation.	3.30259e-18
NZ_CP009241.1|WP_038598767.1|1401925_1402960_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.6528e-49
NZ_CP009241.1|WP_038586984.1|1402974_1403703_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.37938e-76
NZ_CP009241.1|WP_038598781.1|1415942_1416848_+|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|223633	COG0559, LivH, Branched-chain amino acid ABC-type transport system, permease components [Amino acid transport and metabolism].	3.285e-83
NZ_CP009241.1|WP_038587005.1|1414425_1415190_+|MBL-fold-metallo-hydrolase	gnl|CDD|225130	COG2220, COG2220, Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only].	2.55363e-18
NZ_CP009241.1|WP_052091859.1|1397316_1398288_-|S-layer-homology-domain-containing-protein	gnl|CDD|306825	pfam00395, SLH, S-layer homology domain.	2.67499e-06
NZ_CP009241.1|WP_038586993.1|1410790_1411282_+|DinB-family-protein	gnl|CDD|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	2.94227e-06
NZ_CP009241.1|WP_038586981.1|1398912_1400892_+|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	gnl|CDD|223556	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].	1.75425e-173
NZ_CP009241.1|WP_052091861.1|1405887_1407993_+|molybdopterin-oxidoreductase-family-protein	gnl|CDD|239167	cd02766, MopB_3, The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP009241.1|WP_052092460.1|1416866_1417829_+|branched-chain-amino-acid-ABC-transporter-permease	gnl|CDD|119323	cd06581, TM_PBP1_LivM_like, Transmembrane subunit (TM) of Escherichia coli LivM and related proteins. LivM is one of two TMs of the E. coli LIV-1/LS transporter, a Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporter involved in the uptake of branched-chain amino acids (AAs). These types of transporters generally bind type 1 PBPs. PBP-dependent ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABCs, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP, which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. E. coli LivM forms a heterodimer with another TM, LivH, to generate the transmembrane pore. LivH is not included in this subgroup. The LIV-1/LS transporter is comprised of two TMs (LivM and LivH), two ABCs (LivG and LivF), and one of two alternative PBPs, LivJ (LIV-BP) or LivK (LS-BP). In addition to transporting branched-chain AAs including leucine, isoleucine and valine, the E. coli LIV-1/LS transporter is involved in the uptake of the aromatic AA, phenylalanine.	1.06556e-82
NZ_CP009241.1|WP_038586999.1|1412330_1412825_+|SprT-family-protein	gnl|CDD|235290	PRK04351, PRK04351, SprT family protein.	7.57464e-80
NZ_CP009241.1|WP_038586990.1|1410042_1410624_-|CGNR-zinc-finger-domain-containing-protein	gnl|CDD|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	1.52098e-18
NZ_CP009241.1|WP_063848018.1|1401330_1401825_+|HIT-family-protein	gnl|CDD|223611	COG0537, Hit, Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases [Nucleotide transport and metabolism / Carbohydrate transport and metabolism / General function prediction only].	7.58967e-35
NZ_CP009241.1|WP_038587002.1|1412817_1413456_-|pentapeptide-repeat-containing-protein	gnl|CDD|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	1.08894e-15
NZ_CP009241.1|WP_081965706.1|1403823_1405767_+|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	1.87444e-52

Protein sequences

>NZ_CP009241.1|WP_038598778.1|1409106_1409280_+|hypothetical-protein
MATDKRVFTLRLKDENFSKIKYIADRNKRSIAMQIEYLIEQQIEQFEKEKGIIEIEE
>NZ_CP009241.1|WP_038586987.1|1408686_1408965_-|hypothetical-protein
MADIEHAFNQFLSIRMDYIDKSILSQSDEYKHLIGDCNRIFLDLLTKLPEDCKDTLQNYDTATTLLQGIAEVLMYKQGLHDGISLNRLSADT
>NZ_CP009241.1|WP_052091862.1|1408220_1408463_+|hypothetical-protein
MMIVGTILAILAAVVLTIFLGPYGILVLFAVGFGLLLSIHVRTKEIHDDMQKIKEKLGLTAGDDYVSDQEIEAELEQDRV
>NZ_CP009241.1|WP_052091861.1|1405887_1407993_+|molybdopterin-oxidoreductase-family-protein
MKNIQDGVFPAVCPLDCPDTCGLLLHKKDGKLVKIEGNPEHPVTKGAICNKVRHAGEWMQHPDRLTQPLKRVGPKGEGAFVPISWDEAIAEIARKLRSVSEEFGSESILPYNYYGNMGFLSVEGMNRRFFNALGASRLELTICASAGNEGWKHTMGFKGGLNPEDTVNADLIIIWGANIVSTNMHQVVLAEQARKRGAKVIVIDVHRNRTAQWGDWFIQLHPGTDSALALGIMHILFRDKLVDEDFLARYTVGHEELRQQAQLYPPQTVSDITGVPVDDLEQLARMYGEANVSYIRIGNGLQHHDNGGMNVRSISCLPALTGQWLKKGGGALKYNGAYNALNARALERPKLRPNPRARSINMNRLAQALEMTEQPVKALFVFCSNPVVVAPEADRVRAGMQREDLFTVVHELFMTDTAKYADIVLPSTASFENTDLYASYWHHYMQLQEPVLEAPGECKSNFELFSLLGRAMGFDEEAFSQSEDEMIREALDNPANPYLNGVTLERLQAERHVKLDLTARENFLDKLPTPSGKIELYSSTLKAEGLSPLPVYEPLKEGYDGVRRPRADDPYPLNFISPPNHNFLNGTFANVEKHQRMEKGPMLQIHPLDAEARSIRDGDRVKVYNGRGEIVLKAVVTDKMLPGTAISQGLWWEGEDGPQRVNVLTPDRLSDMGRGATFFSTTIQVEKLKLEEQPETVVQES
>NZ_CP009241.1|WP_081965706.1|1403823_1405767_+|serine-hydrolase
MLKAERTIIVLEVARMKNKLQRLLAVPLVFLGMNVFMGHEAEAAATPAVPAALSASQLEQSIDPIMQEELEKRHVPGSAVVVTQGDRIIFSKGYGYADVEQSIPVDPAKTIMRLGSITKTVTAVSAMQLVEQGKLTLHDDLNTFLHAYQLPSFGKQPITLHHLLTHTAGLDESIYKIQAHSREKSLSAEQYLRQYFRQQPPVREPGQEYEYSNAGLGLVGNLIEQTAGTDLGAYMFQNVFTPLKMPSASLTVPESSPDMAKSYVYSNKKYTAVSSTYPHIPGAGALSVIPDEFAHFMIALLNQGVYQGTALLKPDSVEMMQQSQFAEHPKVDGVGYGLYRGHLADGSTVLTHTGEIEGFAAKMELIPSQKLGILIVSNGEEGGITYNKVTDAVAGLLTKKTEAVTPLPYSLEDLQQYERTYTFAKVPQHGWGKWLYFLGGRNYKVTAAEGKLVVSGVFPDGSGETAEKSFVPIADGLFQEQEGGMQLLIDKQHHWKMTIIQETTFSPEPGFWKRPSTLLIVYIVPGLLFLALLAVTLIRYVVRLFRKPRRTVSLHITAISLLMSVFLLLQLTYSNGSITFGYPAWYAWGVSSLPLVAVLFALHLLWRNASQAVKGKVVALTRCFVAIACIGYTGFMYYWNMLSIHFS
>NZ_CP009241.1|WP_038586984.1|1402974_1403703_-|response-regulator-transcription-factor
MSRTVLLADDDPDILELLRLFLERENLKVLEALNGIEAWSFIREQRVDLAVIDIMMPELDGIQLLKLLRTDYKIPVIIISAKNEDSDKILGLQLGADDFIAKPFNPLEVMARIQAMLRRTYEFNEPTGQEDPEPPAPQERTVIGQLELDHLDCVLYKEGQDIPLTAIEYKLLTTFMDSPGRVWTKKQLFEQAWSDPYYEDANTIMVHISRLREKIEDNARQPVYIRTIRGLGYKFARKDDFR
>NZ_CP009241.1|WP_038598767.1|1401925_1402960_-|HAMP-domain-containing-histidine-kinase
MSRLVKSYILFACTLAVVGIAFLIMAIDVEQETITVSVQWLLLLLVLFGLNVLIYSVWTARRITRPLEQIAGAIREMRLRKFHKRLDIQTGDSDEFAQVQMYFNDLAESLQRTEAENRRLQLSKQRMLVDLSHDLKTPITTIQGYAKALQLGMADNEEKREQYLQLIYNKSQLVTSLIDDIFHLSKLDSPDFPVSVEPGDIAELLREAAADYYQQFEDKQFMLHVEIPSREVLVSYDTNLMRRAIANLLSNALRYNPPGTEVTLRLEQSEDVVRLAVIDNGVGISDELKAVIFDPFVRGDASRKRDGGSGLGLSIAKQMMVRQGGELNLDNRPGRTAFELVLYR
>NZ_CP009241.1|WP_063848018.1|1401330_1401825_+|HIT-family-protein
MECLGCRIANRLEPGVQIVYEDQYVACVLDIAPFNDGHLLIMPKEHYLDVEEMDEATSTHIMRVSVTMSQLLKRAFRPDGITICQNGGVFNDLGHYHMHVIPRYEGDGFAWSEPKEGFLSGRPLNEVKEKLVRALEAPEPATAPESASATASELLSAPGEPPKE
>NZ_CP009241.1|WP_038586981.1|1398912_1400892_+|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein
MIQQQGMERINVGIFAHVDAGKTTTTEHILYESGRIRALGSVDSGTAMTDSMEVERQRGISVRAALASFAWKGVQVNLVDTPGHVDFLSEVERSLRVMDCAVLILSAVEGVQAQSEMIWNALRKLGIPTLIFVNKMDRVGADPGAVLAQARTYLSGDIIPVQQPVGKEQEYTGASDLWQAGADAAARTELLEALAERDERLLELYMSGGASDLAVWKKHLQAEAASGRMFPLVYGVAAKGLGITELLDAMIDYYPRAGGDAEQPVSGIVYNIQRDKSMGRMAFVRLYDGTIRNRDTVKNYSKNVEAKVTQIRKVEGGRTEDVGALEAGDIAVVYGLSGVRIGDVLGRPDAIPQEAKLAVPLLTVRVFWGAEFDDHKVIGALQELADEDPLLDAQWLQEERELHIKVMGPIQLEVLDSVMESRYGLKVTFGQPSVIYKETPSRAGEGFIAYTMPKPCWAILRFLIEPGPPGSGLVYESLVRSSDLLPQYQNETTRRVPEALQQGLYGWEVTDLKVTLVEGNHHVWHTHPLDFAVATPMGIMDGLNRIGTTLLEPILQVRIVVPEENGGRVMNDLVQMRGTFEPPVLQGERMIIEGRLPLATSLDYPVTLSSYTKGRSTFTSFFAGYEECPPDVTAERTRRGVNPLDQAKYILSVRKALQG
>NZ_CP009241.1|WP_052091859.1|1397316_1398288_-|S-layer-homology-domain-containing-protein
MKKKQSFQMNAKKLTIACSILAASLSLGTSAFAFSDLKGHSAESKINTLHKDGIINGVTSDKFAPKSKVTFAQGIQFIVSGLQLSPQTAGKASDYFDKVKDKAWYASAFVAAKQNGLSLNKTVDPNSTMTRAQFAHLLTQALQSKGNFPVTMMFANISDGSKLSTAEMNSLQILVNTHIVTLEKNNTFRPSEAVTRGEAAVWLFDAVKFAKEVIEPDGGTTAPSYNYETAVKLEKAADGVNKVTVTVSNLPHPGYGLSIDRIEFGKNKTAVIYYSVTQPDPGKSYAQVISAASVVTYLPEGYTATAQPVTGTAGSSVSSSSVQ
>NZ_CP009241.1|WP_038586990.1|1410042_1410624_-|CGNR-zinc-finger-domain-containing-protein
MLWEDFINSYWRDWRTGDRSKDRDRLEDQEWLEKWLEQQSLQVTSPPEPDELEQLKQLRGLLWGEVQKLVQGNSADPKLLEQLNMYMGKGPAIRQVVWKPDGRAELSLLPQRNDWEQVMAEIAASFAAALLEKETARFRICDNPDCLWVYFDDTRNRSKRYCDDKLCGNLMKVRRFRARKKAEDAGDAGDHVN
>NZ_CP009241.1|WP_038586993.1|1410790_1411282_+|DinB-family-protein
MQNKISDVLLQNWDYAMDVEDWAPPLSDALQGVDSIQASWKPGEAGNSIWETVNHLTYYKERLLNKLKGLPQLPDAESNDATFAVTASGEEAWEQAVAKLKTIHASLREVIEALEEGIYDWGGSGHAPGEEVMSLILHDSYHTGQIVLVRKLQGSWPSHRSFN
>NZ_CP009241.1|WP_144024341.1|1411645_1411783_-|cortex-morphogenetic-protein-CmpA
MPQWLCHQLMKAYFKKDRRQIKLLNECWFFYRNSAESRDSVPREV
>NZ_CP009241.1|WP_038586996.1|1411860_1412220_-|hypothetical-protein
MPKMRYVILQQKQELQFVEMPEEYAYQLSALNLRLNKEIDKLTADNVPNLPLAIAECDSLDLLREGYTLESGLAYINRLESAFSSIQENNYPLISLLTEIRALQAQLEQWYEEEEEGIH
>NZ_CP009241.1|WP_038586999.1|1412330_1412825_+|SprT-family-protein
MTTMSNEELQLWIEQVSLGSFGVPFRHKASFNNRLTTTGGRYFTKSHNIEINPQQLAMYGREETEKIIKHELCHYHLHLAKRGYMHRDADFKSLLAQVGGSRYCGALPGAKARKPQPYRYKLVCTDCAMEYPRKRKADPKRYRCGKCAGKLKLVALELGNGQST
>NZ_CP009241.1|WP_038587002.1|1412817_1413456_-|pentapeptide-repeat-containing-protein
MNYKIDPPKIADPLSLPVQQVFSLESKEEFSLCAISDTFIEYQEASKVSFDKVLFKNVTITESTLRAVELTDVIFENCDLSNVDFSEAFIHRTEFKLCKMIGTDFTRARFQNVRVTDCIGDFASFRFGNFKQTAFENSSLNSADFYQSTFNKMSFSVCKIDQAVMAGSKLRDIDLSDCEFSGLNVDIEDLPGCIISADQAASFAGLLGLVIK
>NZ_CP009241.1|WP_156130820.1|1413688_1413877_+|hypothetical-protein
MQQIEVGVEVETFHRVTLLMFSGGRLVFVKNMQQKQLFGVIANQLFLLFTYSAVHLVILRFI
>NZ_CP009241.1|WP_038587005.1|1414425_1415190_+|MBL-fold-metallo-hydrolase
MKIQLIRNAALWLEYGGVTFLIDPMLSEQGANPPIVNTENDRRNPLVPLPGPVQQWLSPDAVLVTHLHQDHWDAAAVSLLPHEIPLLCQDGDQDTIAAQGFGNITVVQDNAALTFRGVTLTRTAGRHGTGEIGERMGKVSGFVFKAEGEPVLYLAGDTIWCAEVKQALDEYSPEVVIVNAGGAQFITGGHITMNDQDVVDLCHYAPEASVITVHMDAINHCLVTRDLLKARLQQEGLLNRVALPLDGEWIQIDA
>NZ_CP009241.1|WP_038598781.1|1415942_1416848_+|branched-chain-amino-acid-ABC-transporter-permease
MEYFIQQLINGISVGSIYALIALGYTMVYGIIKLINFAHGDVFMVGSFIGLYSAKYLANAGLPPVFVLILSLIISMTISALLGITIERFAYKPLRKSTRIAALITAIGVSFLLEYTGVLILGPQAKGFPDIMDKKQYQLFGTSIQVESNQVMILLTTIILMILLQYIVRYTKTGKAMRAVSFDVEAARLMGINVDRTISATFAIGSALAAAAGVIFGMTYNSVDPLMGVMPGLKAFVAAVLGGIGSIPGALVGGLLLGTVETEISSLGFSSWRDGVAFAVLILILIFKPSGLFGKNVREKV
>NZ_CP009241.1|WP_052092460.1|1416866_1417829_+|branched-chain-amino-acid-ABC-transporter-permease
MISKKFWRGIIVALAFYGVVQVLLTTGIFSDVTRSMLLLIGVNIMLAVSLNLITGITGQFSIGHAGFMSVGAYTSAILTLDYNVPFVPVIIAGGLLAAVFGVLIGMPTLRLNGDYLAIATLGFGEIIRIIMLNTEFVGGASGLSGIPAKTTWTLLFLFTLITVVVINNFIRSTHGRACLAIRENEIAAEAMGINTTRYKIIAFTIGALFAGIAGGLSAHTFYVITPGSFNFLKSFEIIVMVVLGGLGSTAGSIVGAVFVTLLYTYLREFPEWRMIIYSIVLILMMIFRPSGLLGTTKFSFGKLGKKEVKADDSITGSSAS

Crispr_ID: NZ_CP009241_8

• CRISPR_ID: NZ_CP009241_8
• CRISPR_location: 1697686-1697783
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_8

Consensus_repeat	Method
ACACAAAAAACCAAAAAACACAA	CRISPRCasFinder

spacers of NZ_CP009241_8

>8.1|1697709|52|NZ_CP009241|CRISPRCasFinder
TTATACCTTAGTCTCAGATTGACGAGCGAAGGAAGTGAGTGGTAATATTAAA

CRISPR arrays and Neighbor proteins around NZ_CP009241_8

CRISPR arrays

The CRISPR arrays of NZ_CP009241_8

>merge|NZ_CP009241|8|1697686-1697783|CRISPRCasFinder
ACACAAAAAACCAAAAAACACAATTATACCTTAGTCTCAGATTGACGAGCGAAGGAAGTGAGTGGTAATATTAAAACACACAAAAAACCAAAAAACAA

>NZ_CP009241|8|7|1697686-1697783|CRISPRCasFinder
ACACAAAAAACCAAAAAACACAA	TTATACCTTAGTCTCAGATTGACGAGCGAAGGAAGTGAGTGGTAATATTAAA
ACACACAAAAAACCAAAAAACAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038587486.1|1683879_1685049_+|ATP-binding-protein	unknown	unknown	gnl|CDD|377306
NZ_CP009241.1|WP_038587484.1|1683129_1683870_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_081965720.1|1694139_1694670_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|180266
NZ_CP009241.1|WP_038587497.1|1692966_1693539_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038587506.1|1699154_1699940_+|patatin-like-phospholipase-family-protein	unknown	unknown	gnl|CDD|132844
NZ_CP009241.1|WP_081965722.1|1702124_1702505_+|hypothetical-protein	unknown	unknown	gnl|CDD|377672
NZ_CP009241.1|WP_156130830.1|1701996_1702173_+|hypothetical-protein	unknown	unknown	gnl|CDD|227242
NZ_CP009241.1|WP_052091886.1|1698540_1699140_+|sterol-desaturase-family-protein	unknown	unknown	gnl|CDD|377224
NZ_CP009241.1|WP_038587495.1|1689345_1692465_+|DEAD/DEAH-box-helicase	unknown	unknown	gnl|CDD|224125
NZ_CP009241.1|WP_156130831.1|1702567_1702738_+|hypothetical-protein	unknown	unknown	gnl|CDD|224006
NZ_CP009241.1|WP_038587489.1|1685481_1686129_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038587500.1|1694975_1695374_-|hypothetical-protein	unknown	unknown	gnl|CDD|215012
NZ_CP009241.1|WP_038587492.1|1688537_1689356_+|DUF1837-domain-containing-protein	unknown	unknown	gnl|CDD|378078
NZ_CP009241.1|WP_038587509.1|1699968_1700271_+|hypothetical-protein	unknown	unknown	gnl|CDD|226447
NZ_CP009241.1|WP_038587503.1|1697804_1698482_+|DNA-binding-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_081965723.1|1702843_1703374_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|180266
NZ_CP009241.1|WP_081965721.1|1695415_1697554_-|glycosyltransferase	unknown	unknown	gnl|CDD|340861
NZ_CP009241.1|WP_038587516.1|1703755_1704937_-|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|235337
NZ_CP009241.1|WP_052091883.1|1685078_1685354_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038587512.1|1700284_1701943_+|AarF/ABC1/UbiB-kinase-family-protein	unknown	unknown	gnl|CDD|223733

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038587486.1|1683879_1685049_+|ATP-binding-protein	gnl|CDD|377306	pfam04326, AlbA_2, Putative DNA-binding domain. This family belongs to the AlbA clan of DNA-binding domains.	1.05414e-10
NZ_CP009241.1|WP_081965720.1|1694139_1694670_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|180266	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK.	2.52556e-104
NZ_CP009241.1|WP_081965723.1|1702843_1703374_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|180266	PRK05803, PRK05803, RNA polymerase sporulation sigma factor SigK.	4.36363e-104
NZ_CP009241.1|WP_038587506.1|1699154_1699940_+|patatin-like-phospholipase-family-protein	gnl|CDD|132844	cd07205, Pat_PNPLA6_PNPLA7_NTE1_like, Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE hydrolyzes sn-1 esters in lysophosphatidylcholine and lysophosphatidic acid, but shows no lipase activity with substrates like triacylglycerols (TG), cholesteryl esters, retinyl esters (RE), phosphatidylcholine (PC), or monoacylglycerol (MG). This family includes subfamily of PNPLA6 (NTE) and PNPLA7 (NRE)-like phospholipases.	1.24985e-60
NZ_CP009241.1|WP_081965722.1|1702124_1702505_+|hypothetical-protein	gnl|CDD|377672	pfam06541, ABC_trans_CmpB, Putative ABC-transporter type IV. CmpB is a family of membrane proteins that are likely to be part of a two-component type IV ABC-transporter system. Families can transport multiple drugs including ethidium and fluoroquinolones. UniProtKB:Q83XH0 is a member of TCDB family 3.A.1.121.4.	5.34871e-16
NZ_CP009241.1|WP_156130830.1|1701996_1702173_+|hypothetical-protein	gnl|CDD|227242	COG4905, COG4905, Predicted membrane protein [Function unknown].	2.0644e-08
NZ_CP009241.1|WP_038587509.1|1699968_1700271_+|hypothetical-protein	gnl|CDD|226447	COG3937, COG3937, Uncharacterized conserved protein [Function unknown].	6.78638e-07
NZ_CP009241.1|WP_038587495.1|1689345_1692465_+|DEAD/DEAH-box-helicase	gnl|CDD|224125	COG1204, COG1204, Superfamily II helicase [General function prediction only].	7.41557e-35
NZ_CP009241.1|WP_156130831.1|1702567_1702738_+|hypothetical-protein	gnl|CDD|224006	COG1080, PtsA, Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) [Carbohydrate transport and metabolism].	7.1255e-08
NZ_CP009241.1|WP_038587500.1|1694975_1695374_-|hypothetical-protein	gnl|CDD|215012	smart01073, CDC48_N, Cell division protein 48 (CDC48) N-terminal domain. This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the N-terminus. The VAT-N domain found in AAA ATPases is a substrate 185-residue recognition domain.	1.02903e-16
NZ_CP009241.1|WP_038587492.1|1688537_1689356_+|DUF1837-domain-containing-protein	gnl|CDD|378078	pfam08878, DUF1837, Domain of unknown function (DUF1837). This family of proteins are functionally uncharacterized.	0.00021763
NZ_CP009241.1|WP_081965721.1|1695415_1697554_-|glycosyltransferase	gnl|CDD|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	2.33933e-41
NZ_CP009241.1|WP_038587516.1|1703755_1704937_-|alpha/beta-hydrolase	gnl|CDD|235337	PRK05077, frsA, esterase FrsA.	1.55437e-05
NZ_CP009241.1|WP_052091886.1|1698540_1699140_+|sterol-desaturase-family-protein	gnl|CDD|377224	pfam04116, FA_hydroxylase, Fatty acid hydroxylase superfamily. This superfamily includes fatty acid and carotene hydroxylases and sterol desaturases. Beta-carotene hydroxylase is involved in zeaxanthin synthesis by hydroxylating beta-carotene, but the enzyme may be involved in other pathways. This family includes C-5 sterol desaturase and C-4 sterol methyl oxidase. Members of this family are involved in cholesterol biosynthesis and biosynthesis a plant cuticular wax. These enzymes contain two copies of a HXHH motif. Members of this family are integral membrane proteins.	8.60678e-11
NZ_CP009241.1|WP_038587512.1|1700284_1701943_+|AarF/ABC1/UbiB-kinase-family-protein	gnl|CDD|223733	COG0661, AarF, Predicted unusual protein kinase [General function prediction only].	8.64371e-154

Protein sequences

>NZ_CP009241.1|WP_081965721.1|1695415_1697554_-|glycosyltransferase
MCPLLMAVLCVLIILRSEKMKIILFYSSIGQGHISTARSIEKEIRKQNSEAIILQKDIREFMAPVERILDEKLYWFVVKNLPTLFDSLFQARQEQGNSVGSLSSLRNDYSEQKVHEYLLAENPDSILTTHYGAAQVLGNLREKGFIPGIKIGWLHTDYFEGYFPRISKRIDRTFLAHPSLETRWLSAGVFPDLVETSGMPVDIPLNKMDISKECLKHIGFSPYVTTITIASGKEGIGDFPSIVLSLANAIQEHFQIIAVCGRNKKQFKALQRIQRTLPKNIKLEISGFIPHSDLISFIQASDLFITKAGGLSPTEAFLLGKPTVLLSVISGHERENAELFSKLGLAELNIAVKDIGSLVQKLLSDHDKQNTMLAAQQKFRENKDISKITYFLLDPEVKARCTPPTFGLENGHSASNVYNALAKLEIDAQADMEILLSYSTSKNDERIARENPFGHIAIRIGDTVYSSNHKAYPEKESLLQHLSLATYLFGVLPPSCHQEHTSTYGMAYARDTLGFRIKGISEESLQSMHDEAAKIEEEFRLGICKYDVYEYNCADFVVRILQKSGYNIKPINGIGSIITMPLDVFEKVRTAFEGDPLFITELIAYRRLPGSHAAYRFSHFPLSTGQPGRALAQVLFNSSPNKLELMTSKQLTSSIGDDRIYFENLSGSLSKSTFDGFGRSRSNLNRIDRILFKDAKRLHLSFIKSLRIFHSH
>NZ_CP009241.1|WP_038587500.1|1694975_1695374_-|hypothetical-protein
MSEIITRQVKESDTKNAGYSIVRANHADMERLGCSNGDIVQLEGKRKALARVMAEQKNSEQGFVQIDNVVRENAGITTGDQVNICKAVYIHVLKVTVMPHASTKRLLQTQPHQKKYLSRNRAVECSDETNIG
>NZ_CP009241.1|WP_081965720.1|1694139_1694670_+|sigma-70-family-RNA-polymerase-sigma-factor
MTSHRVHNLKKFDNTGEDMEDLISIGTIGLIKAIESYRPNKGTKLATFAARCIENEILMHLRSLKKTRKDVSLHDPIGTDKEGNEITLIDILGSEADDVIKEVDLKIEKSKIYRNLDILDEREKEVVVGRFGLDTGGEERTQREIAKDLGISRSYVSRIEKRALMKLYHEFYKAKR
>NZ_CP009241.1|WP_038587497.1|1692966_1693539_+|hypothetical-protein
MIPERMREILVGAVKAAEQSTLKDIALVDLSGEENITIDLLKAIKILCLQAFEKHKDNSGRFNYEVTAREFPKRTMEPMVSADFAISLRKYDVWSGTEHLEKVKSVLVQAKLPESSDYKRLIKQINDMGQISDESYVAVYDFTGVYIVKSTDVIESGYRVKNVTVDKRLSLGDFFSDIFICHRGKVGFGC
>NZ_CP009241.1|WP_038587495.1|1689345_1692465_+|DEAD/DEAH-box-helicase
MRPSKNSELLLGATRSKAKMFEYGVLEEHHIELPKDPARLFSLTIGLLGEYTARLNRRDITLEQESALKEDLHFAAYFFDSYLQSRLDLTLKPYLLLLGSASYYLCDLPGSSKVLAYKITDSPDLGAFGLENLLIWLLMGEYAEPLQIEGMYSAIIFLISEAFVLFWHNGRNTLDVERYCQELRESIYLNGTSRELLIADIIFSIVRKKVENSSWSSLPLYTNLSLDTWRSAIQKESFIKELWPAQHLLGLNGFFIGKSGVVQMPTSAGKTKSIEIIIRAAFITNRTSLAVIVAPFRALCQEINSDLHNAFIDENNILVNELTDVPLIDFSLDTSLNVKQILIVTPEKLLYILRHNPDISEDIGLIIYDEGHQFDNGSRGITYELLLTSLKHMISIETQMVLISAVISNADIIGEWLIGENSINVDGSHLTPTFRTFAFASWIHQLGRLEFVSNHNPEVGEFFVPRIIEPIQLNLIGRERSPRIFPNKEDSQSIALFLALKLVNNGTVAIFVGRKATAAKVGEKLTDIFRRGIPLISPKSLSDENEVIRLSNLIEHNMGSEAIETKCANLGVFIHHGNIPQGIRLATEFALKETMIKFVICTSTLAQGVNIPVRYLLITSLYQGNQKIKIRDFHNLIGRAGRSGMYTEGSIIFADPTVYDKRRSKKDRWRWSQATEALNPLNSEPCISTLFSLFDPIESDMKESRLVFNTSELVQIYYSSPSELDEWKRNIATDGFSLSSIESQVSNKFSIISSVESFIMTNWDSEDYEVDQFVELSTQTLAYFLGDISQKIQLTQLFTEIARHIHLIVGSLESKRIYGRTMFSLRKTYDMQEWLQINVTGLLYCGNVTELLNFLWPLLYENIENNTFKKCSSPEFLENITLMWIAGEPYKNMLEEVRNAGVMINGKRPRNFKMEDIVEICDNSLSYEGTMILAAVIELIPLVHNDEDKRVSQLIELIETFQKILKYGLPSLKAVTIYELGFTDRVIAQQITDILGGARSSRRATILQLKEYRERLSNLLELYPTYFQIKLQQFLAKVD
>NZ_CP009241.1|WP_038587492.1|1688537_1689356_+|DUF1837-domain-containing-protein
MVFTNVHLNWLQDTGLSLTTNEGKTITVLEFLHQPDETILSEWAKHFRNHYCLDNEIDFLRGGTGLDRKNYLVDIKFPSSRNAPGPSIRAGDFGEILSADYLEYILNYWVPRTRYSNKAVRNESTKGSDVLGFKFIHNNGESLEDTLAIFEAKTQFSGREPNPRLQDAVDGSAKDHARRAESLNAIKQRFLDKGIVGEALRIQRFQNIEDHPYKELYGAVAILSSNYYESNLLRATITNNHPNSVDLMLMVIKGEDLMPLVTELYRRAADEA
>NZ_CP009241.1|WP_038587489.1|1685481_1686129_+|hypothetical-protein
MANIFENLKLLKKDMEDRGWVIDSFIFSYNNEDFIVLVKLFVGNEKKKEKYALVKLEFLRQSDLNSSLQVEANSNALFIDTKTLREYFKIEYNENLGDILRQFKEYFSRFIPIEVVEDKSDDQLRVIVAYLSKSDSENPNKLYCYQVRRNGYKSDGTLAQRSFYNDNKTRILRRILYTKLKNEKNISFCYSENKNDENTDEIILANWVKKQKVKY
>NZ_CP009241.1|WP_052091883.1|1685078_1685354_+|hypothetical-protein
MENYNESIIEIITKVETLFEAAILASNKADAKPFLSEIRSLEVSLNLTPYLRIVFNEFLAYAENASGQVKEKEHWKAAAEQSLYKLTSGLR
>NZ_CP009241.1|WP_038587486.1|1683879_1685049_+|ATP-binding-protein
MIKLRTYDLEDEVKALILTEREDDYWDFKVKHHLNKANLLHDIICMANNRVDRDAYIIFGISDVTFEVVGIENDDNRRNQQQMIDFLKSKRFISGIRPRVELRTLMLAGHKIDILIIKNSTDTPCFLTEDFSDNGRKVRTNHIYTRVGDTNTDIDKSADINNVEYLWKKRFLLTRSPFEQIIERLKNKNEWERNEDTYFNVIKPECTIVLEYDDEDRELLPEFYAYAVSNPSTMYQMLSVKYYGTQLYGRQVVVLDSGRYITPTPDWEFLYFGNYGFRTDYAFKYFMKNSPLYKLNEFLYNEEQHEASIARRRFFEVVLLFEDSLEKDAFLEYVHLNKEDFLNKLAALDGKWSWIEANTKRQEEQVVIRLKTGKVLNQMLINFRQCTFK
>NZ_CP009241.1|WP_038587484.1|1683129_1683870_+|hypothetical-protein
MDIILKIVLSGTIPILINLVIKALTSSSFDNLFYLKHQKTQQRIILYVVLGVLFLAYGSLLTAVYASFVKMKYTIVVAAIFIVLFLLGIMILGILCSIKWMKGKCSVKKFTLSETKANRLTFTVFMCNMVVFAVSFYDTMNITGLERTEYVVKILVCIGQFCLYAFLILKSYFYLIDFTRHQWNYVISPTPEDIDKRYLYVLYSLSPTQMVLSESIENVENPSSVYLFDITKQTYIHFERVATLKG
>NZ_CP009241.1|WP_038587503.1|1697804_1698482_+|DNA-binding-protein
MPLTRRRLQLLGQLVELYQRTSLPIHYETLARSLGVSKWTAYDMLKEIEKLGFVTRSYEVNSKETGRSQVVFSPTVKASDLFKQNRSDSFNLADWEQTVVHIRNLLKSVKNGNVNDLIRNMMNEIPSKASSIEFCGYILGLLLVYVKKLGGKTETLIRLVVSKTPNSENGTLMFVGTVLGTIIQTINDELGNEFTELVSEFLRIMDQLSSQDRRLLSDMLHEALA
>NZ_CP009241.1|WP_052091886.1|1698540_1699140_+|sterol-desaturase-family-protein
MNHYEEFYYQPAVRFNVNMSFLGIALSFIYFDWIRTFAGLILGIFLFTVFEYFAHRYVHHHYALAVFKNAHLKHHHDSEDIQHLFFSNRVGSIYCLILTILLWLVVNDLSISTAMLTGILLYNFYAQWWHFVAHRPITPGTAWGRRMKDRHLWHHEENGIINFGVSQPYIDYLLGTSGTGTAFAHSNEHINHPEVKKTR
>NZ_CP009241.1|WP_038587506.1|1699154_1699940_+|patatin-like-phospholipase-family-protein
MGKTGLVLGGGAVRGLAHLGVLKAFERHGIRIDRIVGTSMGGAIGGLYAAGVSARDIEQLLLRTPKYRLLDVGIRHRGLLAGNAVHNRINELLQKHGKHDLRIEQFPIEFKAIAVDLMKGKQVVLDKGELGTVLRATTAFPGVFAPLMDEDQMLVDGGVLNNLPVEEALGEDICFVIAVDVAREHENKPPRNMVEVVYRSYSLMTAERKHASLKLADFVIRPDVGTFAAFDFTKTEECIKVGEEAAERSMEELKYQIQMAK
>NZ_CP009241.1|WP_038587509.1|1699968_1700271_+|hypothetical-protein
MKTTLEKAMMLGIGLAAAGKEQIELTVGELVKKGEVGRLEARSLADKLIHRKEEEEHRMEARITERVQAILSEHNLTVLEELEQLKLRVLALEQNKDLHN
>NZ_CP009241.1|WP_038587512.1|1700284_1701943_+|AarF/ABC1/UbiB-kinase-family-protein
MGVQKKFRQLQRYRAITSALVRSGFGFMVYSNSGEAAVTANSAMDWPSAGKHIRLLLEELGTTFIKLGQLASTRPDLVPQPVLKELVKLQDAVPPFPFADVSRVIEEELGAPISQLFRTFESLPIASASIGQVHRAVLADGKEVAVKIQRPQLSTLVETDLDILAGLARLADRRGNWSASYSLTEVVEELSQCLLAELDYRQEAAHLERFARAADEMNYVRIPAVYRPYSSQRVLTMEFIQGIRLSNIEQLKEQGIRTSVVAERIAGTIFQQILVDGVFHADPHPGNILVLPGEEIALLDFGMVGRLSAHTQKHFATFIIALRNRSSKGVMRAIEHLGMIPEEVDRKKLYMDVEEMRTKYYDVPLKEVRLGDMLNDLFGVAYKHGIRVPSELTMVGKSILTTEGVVAELDPDFSMLNVAEPIGRRLYLERLNPWSFLKNTFEDAPEYLQIMSELPVTMKRLTAMLNKGKMQVEVVSPQLEQLVKKLDRISNQMSFSIVLLALSLVLLGLIIGSSISGAQTILWRLPMLEIGIVISLLMFAWLLYAIFRSGRF
>NZ_CP009241.1|WP_156130830.1|1701996_1702173_+|hypothetical-protein
MGVGQMSTEFSTVLLFFAVYTLGGWLLETVYASVRQQKFVNRGFMFGCFARFMGSEYC
>NZ_CP009241.1|WP_081965722.1|1702124_1702505_+|hypothetical-protein
MYVWLFCPIYGFGVLLILYVAKGTEARIEDPFIRMMALICVSALLVTWLEYVTGLILDKVLQRKWWDYSGNQWNLGGYVCGILIAVGIYCMSTDGIPASRCIADARFGSGANDYDSGVVCTGVFHI
>NZ_CP009241.1|WP_156130831.1|1702567_1702738_+|hypothetical-protein
MAGDASVFQLLQGLGLEGFRLRASSILPARSQISMLSVVEMKSLAAKEVPTIFAGF
>NZ_CP009241.1|WP_081965723.1|1702843_1703374_+|sigma-70-family-RNA-polymerase-sigma-factor
MTSDRVHNLKKFDNTGEDMEDLISIGTIGLIKAIESYRPNKGTKLATFAARCIENEILMHLRSLKKTRKDVSLHDPIGTDKEGNEITLIDILGSEADDVIKEVDLKIEKSKIYRNLDILDEREKEVVVGRFGLDTGGEERTQREIAKDLGISRSYVSRIEKRALMKLYHEFYKAKR
>NZ_CP009241.1|WP_038587516.1|1703755_1704937_-|alpha/beta-hydrolase
MSIEFSRWPSNYMMSYQVTKALGMASLGATDVTEIYEACKKIDPDDKDTWHREWLITAQALERHGKEAETAGNWYTARNCYIRACNYYRIAEYAVMDDDIEKIRIFKKVNELFEAAGKYFDVRPEKIQVDYEDVKLEGYFFSPSWIKGPKPTLFALNGGDEWSIENYFWLGPAFISCGYNFLVYDQPGTGLSLYEKGKGRRADSEAFHSRAIDFLLTRPEVDPDKIIVHGESFAAYDSLRFASFDHRIAAVISDGGTHAFDWDAMLKWMPPSLAAHGMRILGAKSLEDFAGNPRFAYNLEGVLHQIECPLLVMHGAEEILVQPNPLTQALKNYEQAGLKNKTFYPIEDRRLGGLEHCQVDNINVLHEVVLNWLCSIGLGPASPRLSDCQDIIK

Crispr_ID: NZ_CP009241_9

• CRISPR_ID: NZ_CP009241_9
• CRISPR_location: 2510459-2510630
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP009241_9

Consensus_repeat	Method
GTAAGACGTAAGACGTAAGACGTAAGA	CRISPRCasFinder

spacers of NZ_CP009241_9

>9.1|2510486|22|NZ_CP009241|CRISPRCasFinder
GGTAAGTGGCAAGTGGTAGGAA
>9.2|2510535|21|NZ_CP009241|CRISPRCasFinder
AGCAAGAGTTAAAGGCAAGAC
>9.3|2510583|21|NZ_CP009241|CRISPRCasFinder
GTTAAAGGTAAGACGTAAGAC

CRISPR arrays and Neighbor proteins around NZ_CP009241_9

CRISPR arrays

The CRISPR arrays of NZ_CP009241_9

>merge|NZ_CP009241|9|2510459-2510630|CRISPRCasFinder
GCAAGAAGCAAGAGGTAAGTGGTATGAGGTAAGTGGCAAGTGGTAGGAAGTAAGACGTAAGACGTAAGACGTAAGAAGCAAGAGTTAAAGGCAAGACGTAAGAGGTAAGACGTAAGAAGCAAGAGTTAAAGGTAAGACGTAAGACATAAGACGTAAGACATAACAGGTAAGA

>NZ_CP009241|9|8|2510459-2510630|CRISPRCasFinder
GCAAGAAGCAAGAGGTAAGTGGTATGA	GGTAAGTGGCAAGTGGTAGGAA
GTAAGACGTAAGACGTAAGACGTAAGA	AGCAAGAGTTAAAGGCAAGAC
GTAAGAGGTAAGACGTAAGAAGCAAGA	GTTAAAGGTAAGACGTAAGAC
ATAAGACGTAAGACATAACAGGTAAGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038588964.1|2521672_2522401_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP009241.1|WP_038588943.1|2506023_2506965_+|malate-dehydrogenase	unknown	unknown	gnl|CDD|180477
NZ_CP009241.1|WP_038588938.1|2503498_2504611_+|citrate-synthase	unknown	unknown	gnl|CDD|184467
NZ_CP009241.1|WP_038588935.1|2501993_2503109_-|sporulation-integral-membrane-protein-YtvI	unknown	unknown	gnl|CDD|274334
NZ_CP009241.1|WP_081966130.1|2509570_2510179_+|hypothetical-protein	unknown	unknown	gnl|CDD|181086
NZ_CP009241.1|WP_038588933.1|2501438_2501837_+|FxsA-family-protein	unknown	unknown	gnl|CDD|236913
NZ_CP009241.1|WP_038588954.1|2510696_2511461_+|thiazole-synthase	unknown	unknown	gnl|CDD|234687
NZ_CP009241.1|WP_038599227.1|2513417_2515073_+|fumarate-hydratase	unknown	unknown	gnl|CDD|377546
NZ_CP009241.1|WP_038588950.1|2508337_2509207_+|glucose-1-dehydrogenase	unknown	unknown	gnl|CDD|235853
NZ_CP009241.1|WP_038588952.1|2510231_2510435_+|sulfur-carrier-protein-ThiS	unknown	unknown	gnl|CDD|169065
NZ_CP009241.1|WP_038588956.1|2512676_2513312_-|5'-deoxynucleotidase	unknown	unknown	gnl|CDD|378993
NZ_CP009241.1|WP_038588969.1|2523404_2524064_+|phosphate-signaling-complex-protein-PhoU	unknown	unknown	gnl|CDD|273990
NZ_CP009241.1|WP_038588947.1|2507656_2508082_-|NUDIX-domain-containing-protein	unknown	unknown	gnl|CDD|240054
NZ_CP009241.1|WP_038588962.1|2519674_2521468_+|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|380161
NZ_CP009241.1|WP_038588945.1|2507087_2507513_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_052091967.1|2511490_2512648_+|2-iminoacetate-synthase-ThiH	unknown	unknown	gnl|CDD|236425
NZ_CP009241.1|WP_038588958.1|2515337_2518319_+|alpha-amylase	unknown	unknown	gnl|CDD|200459
NZ_CP009241.1|WP_038588941.1|2504708_2506004_+|NADP-dependent-isocitrate-dehydrogenase	unknown	unknown	gnl|CDD|180792
NZ_CP009241.1|WP_076110646.1|2522541_2523336_+|phosphate-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224042
NZ_CP009241.1|WP_038588960.1|2518450_2519473_-|LacI-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224525

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038588964.1|2521672_2522401_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.65431e-84
NZ_CP009241.1|WP_038588943.1|2506023_2506965_+|malate-dehydrogenase	gnl|CDD|180477	PRK06223, PRK06223, malate dehydrogenase; Reviewed.	0
NZ_CP009241.1|WP_038588938.1|2503498_2504611_+|citrate-synthase	gnl|CDD|184467	PRK14034, PRK14034, citrate synthase; Provisional.	0
NZ_CP009241.1|WP_038588935.1|2501993_2503109_-|sporulation-integral-membrane-protein-YtvI	gnl|CDD|274334	TIGR02872, UPF0118_membrane_protein_YtvI, sporulation integral membrane protein YtvI. Three lines of evidence show this protein to be involved in sporulation. First, it is under control of a sporulation-specific sigma factor, sigma-E. Second, mutation leads to a sporulation defect. Third, it if found in exactly those genomes whose bacteria are capable of sporulation, except for being absent in Clostridium acetobutylicum ATCC824. This protein has extensive hydrophobic regions and is likely an integral membrane protein. [Cellular processes, Sporulation and germination].	1.36724e-72
NZ_CP009241.1|WP_081966130.1|2509570_2510179_+|hypothetical-protein	gnl|CDD|181086	PRK07695, PRK07695, thiazole tautomerase TenI.	1.36536e-81
NZ_CP009241.1|WP_038588950.1|2508337_2509207_+|glucose-1-dehydrogenase	gnl|CDD|235853	PRK06701, PRK06701, short chain dehydrogenase; Provisional.	0
NZ_CP009241.1|WP_038588954.1|2510696_2511461_+|thiazole-synthase	gnl|CDD|234687	PRK00208, thiG, thiazole synthase; Reviewed.	3.35919e-144
NZ_CP009241.1|WP_038588969.1|2523404_2524064_+|phosphate-signaling-complex-protein-PhoU	gnl|CDD|273990	TIGR02135, Uncharacterized_protein, phosphate transport system regulatory protein PhoU. This model describes PhoU, a regulatory protein of unknown mechanism for high-affinity phosphate ABC transporter systems. The protein consists of two copies of the domain described by pfam01895. Deletion of PhoU activates constitutive expression of the phosphate ABC transporter and allows phosphate transport, but causes a growth defect and so likely has some second function. [Regulatory functions, Other, Transport and binding proteins, Anions].	2.4269e-59
NZ_CP009241.1|WP_038588956.1|2512676_2513312_-|5'-deoxynucleotidase	gnl|CDD|378993	pfam12917, HD_2, HD containing hydrolase-like enzyme. This is a family of bacterial and archaeal hydrolases.	2.35506e-92
NZ_CP009241.1|WP_038588952.1|2510231_2510435_+|sulfur-carrier-protein-ThiS	gnl|CDD|169065	PRK07696, PRK07696, thiamine biosynthesis protein ThiS.	3.80521e-19
NZ_CP009241.1|WP_076110646.1|2522541_2523336_+|phosphate-ABC-transporter-ATP-binding-protein	gnl|CDD|224042	COG1117, PstB, ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism].	7.98035e-172
NZ_CP009241.1|WP_038588947.1|2507656_2508082_-|NUDIX-domain-containing-protein	gnl|CDD|240054	cd04699, Nudix_Hydrolase_39, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes belonging to this superfamily require a divalent cation, such as Mg2+ or Mn2+, for their activity and contain a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which functions as a metal binding and catalytic site. Substrates of nudix hydrolases include intact and oxidatively damaged nucleoside triphosphates, dinucleoside polyphosphates, nucleotide-sugars and dinucleotide enzymes. These substrates are metabolites or cell signaling molecules that require regulation during different stages of the cell cycle or during periods of stress. In general, the role of the nudix hydrolase is to sanitize the nucleotide pools and to maintain cell viability, thereby serving as surveillance & "house-cleaning" enzymes. Substrate specificity is used to define families within the superfamily. Differences in substrate specificity are determined by the N-terminal extension or by residues in variable loop regions. Mechanistically, substrate hydrolysis occurs by a nucleophilic substitution reaction, with variation in the numbers and roles of divalent cations required.	2.21192e-29
NZ_CP009241.1|WP_038588962.1|2519674_2521468_+|HAMP-domain-containing-protein	gnl|CDD|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp|Q2G2U4.1|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	1.3645e-106
NZ_CP009241.1|WP_038599227.1|2513417_2515073_+|fumarate-hydratase	gnl|CDD|377546	pfam05681, Fumerase, Fumarate hydratase (Fumerase). This family consists of several bacterial fumarate hydratase proteins FumA and FumB. Fumarase, or fumarate hydratase (EC 4.2.1.2), is a component of the citric acid cycle. In facultative anaerobes such as Escherichia coli, fumarase also engages in the reductive pathway from oxaloacetate to succinate during anaerobic growth. Three fumarases, FumA, FumB, and FumC, have been reported in E. coli. fumA and fumB genes are homologous and encode products of identical sizes which form thermolabile dimers of Mr 120,000. FumA and FumB are class I enzymes and are members of the iron-dependent hydrolases, which include aconitase and malate hydratase. The active FumA contains a 4Fe-4S centre, and it can be inactivated upon oxidation to give a 3Fe-4S centre.	4.49844e-90
NZ_CP009241.1|WP_052091967.1|2511490_2512648_+|2-iminoacetate-synthase-ThiH	gnl|CDD|236425	PRK09240, thiH, 2-iminoacetate synthase ThiH.	0
NZ_CP009241.1|WP_038588958.1|2515337_2518319_+|alpha-amylase	gnl|CDD|200459	cd11320, AmyAc_AmyMalt_CGTase_like, Alpha amylase catalytic domain found in maltogenic amylases, cyclodextrin glycosyltransferase, and related proteins. Enzymes such as amylases, cyclomaltodextrinase (CDase), and cyclodextrin glycosyltransferase (CGTase) degrade starch to smaller oligosaccharides by hydrolyzing the alpha-D-(1,4) linkages between glucose residues. In the case of CGTases, an additional cyclization reaction is catalyzed yielding mixtures of cyclic oligosaccharides which are referred to as alpha-, beta-, or gamma-cyclodextrins (CDs), consisting of six, seven, or eight glucose residues, respectively. CGTases are characterized depending on the major product of the cyclization reaction. Besides having similar catalytic site residues, amylases and CGTases contain carbohydrate binding domains that are distant from the active site and are implicated in attaching the enzyme to raw starch granules and in guiding the amylose chain into the active site. The maltogenic alpha-amylase from Bacillus is a five-domain structure, unlike most alpha-amylases, but similar to that of cyclodextrin glycosyltransferase. In addition to the A, B, and C domains, they have a domain D and a starch-binding domain E. Maltogenic amylase is an endo-acting amylase that has activity on cyclodextrins, terminally modified linear maltodextrins, and amylose. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	6.97469e-159
NZ_CP009241.1|WP_038588941.1|2504708_2506004_+|NADP-dependent-isocitrate-dehydrogenase	gnl|CDD|180792	PRK07006, PRK07006, isocitrate dehydrogenase; Reviewed.	0
NZ_CP009241.1|WP_038588933.1|2501438_2501837_+|FxsA-family-protein	gnl|CDD|236913	PRK11463, fxsA, phage T7 F exclusion suppressor FxsA; Reviewed.	6.20085e-35
NZ_CP009241.1|WP_038588960.1|2518450_2519473_-|LacI-family-transcriptional-regulator	gnl|CDD|224525	COG1609, PurR, Transcriptional regulators [Transcription].	3.34033e-102

Protein sequences

>NZ_CP009241.1|WP_038588952.1|2510231_2510435_+|sulfur-carrier-protein-ThiS
MNLIVNGKGGTYEESCRTVADLLCRSEWTGRLVIVELNGEIVGKDVYGNTLLSEGDRVELVHFVGGG
>NZ_CP009241.1|WP_081966130.1|2509570_2510179_+|hypothetical-protein
MLKEIHLISDGRQNPAQFVQLAAAVQFIVDYIHLREKAMSARELIALTEQLIIAGVPPAKLVINDRIDVALAAGAGGVQLAWHSLPPAVARSVAPDLRLGRSVHSPEEAAESGRQGADFCLFGHVFPSACKPGQRERGLQQLAEAVRCSSIPLIAIGGIEPGNAGKVLATGAAGIAVMSGICSAGDPVAAATAYRSAVQAVP
>NZ_CP009241.1|WP_038588950.1|2508337_2509207_+|glucose-1-dehydrogenase
MPDNTQTKKTLPPQVQDRQPGIESEMNPLPEFETSAYKAAGKLLGKAALITGGDSGIGRAVAVHFAKEGADVVISYLNEHSDAEETKRQVEQEGRKCVLIAGDIGVEAFCQDLINKTVEGLGKLDILINNAAEQHPQEKIEDITSEQLERTFRTNIFSMFYLTKAAMPHLKKGSTIINTTSITAYRGSPQLLDYSSTKGAILSFTRSLSMNLADKGIRVNAVAPGPIWTPLIPSTFDAKKVSEFGGTQPMKRPGQPEELAPAYVYLASDDSSYVSGQVMHVNGGEVVNG
>NZ_CP009241.1|WP_038588947.1|2507656_2508082_-|NUDIX-domain-containing-protein
MVKHTRSIIVAVKGVIVHGGRILLVRRAARDSVGAGTWECAGGKIEFGEDLEAALEREIYEETGLAVTVGNLLYATSFLTDPARQLVIITYLCRSTDHAVHLSVEHSDYKWCTRLELQRLLPAGILAEFEKSHVFSLNELL
>NZ_CP009241.1|WP_038588945.1|2507087_2507513_+|hypothetical-protein
MGHFLFFLHMIGTLALGFYLVLPFVLGRVQKLSVPAREGTLSAIGGFNRFAQYGLVIQLLTGGYMMTKGEYSVPWMIVVVVLLLAMFALGGIISKPLRLAAAGMRENRDVSAETGKIRTLSLLLMVALVLMVFFMVYNSII
>NZ_CP009241.1|WP_038588943.1|2506023_2506965_+|malate-dehydrogenase
MAIKRYKITVVGAGFTGATTALMLAQKELGNVVLLDIPQLENPTKGKALDMLEAGPVQKFDSQITGTSSYEDAADSDIVIITAGIARKPGMSRDDLVNTNAGIVKSVCENVKRVAPESIVIILSNPVDAMTYVAYNALGFPKNRVIGQSGVLDTARYCTFIAQELNVSVEDVRGFVLGGHGDDMVPLVRYSSVGGIPIDTLISAERIAEIVQRTRVGGGEIVSLLGNGSAYYAPAASLVQMTEAILKDKKRIIPVIALLEGEYGYDGLFMGIPALLGADGIEKVYELELTAEEKTALDKSADSVRAVTSLVTI
>NZ_CP009241.1|WP_038588941.1|2504708_2506004_+|NADP-dependent-isocitrate-dehydrogenase
MLKLEKYDLPTEGEQITIEDGKLVVPNHPIIPFIEGDGTGRDIWKASKRVLDEAVAKAYGGTKKIAWYEVFAGEKAFNTYGEWLPNDTLEAIREYIVAIKGPLTTPIGGGIRSLNVALRQELDLYVCLRPVRYFDGVPSPVKHPELVDMVIFRENTEDIYAGIEYQEGSEAVKKVIEFLQKEMGVNKIRFPETSGIGIKPVSSEGSKRLVRAAVEYAIKHGRKSVTLVHKGNIMKFTEGAFKNWGYEVAEQEFGDQVFTWNQYDVIKERDGEAAANAAQKEAEAAGKIIIKDAIADIALQQVLTRPTDFDVIATLNLNGDYLSDALAAQIGGIGIAPGANINYLTGHAIFEATHGTAPKYADKDVVNPGSVILSGVMLLEHLGWQEAADLIYKGMSTAINNKTVTYDFARQMEGATELKCSAFADEIINNL
>NZ_CP009241.1|WP_038588938.1|2503498_2504611_+|citrate-synthase
MTATKGLEGIVATTSSISSIVDGVLTYRGFDIDDLAENATFEETAYLLWFGNLPTTPELQALRRDLSAFAPIPEQVIAQMKLYPKEANTMAALRSAVSSLALYDEAADDMSREANEIKAVKLQAQIPTIVAALARIRKGLEPIAPKEGLSIAENFLYMLWGKQPDVVSVKALDAALVLHADHELNASTFAGRVTVATLSDIYSGVTSAIGALKGPLHGGANEAVMKMLEEIGSLDAVEPYIRGKLERREKIMGFGHRVYKNGDPRAKHLMKMSHELGTMKNDTTLYDMSVKIEELITGQKGLKPNVDFYSASVYTQLGIERELFTPIFAISRASGWTAHILEQYVDNRIIRPRAEYTGMSEQKYVPVDER
>NZ_CP009241.1|WP_038588935.1|2501993_2503109_-|sporulation-integral-membrane-protein-YtvI
MDTLVLKRVLRGLWVVLAAAGLMFAIYVLLPLLYPLLLAWLLAYIIHPLVVILKGFKLPGWLAVSLSLLFYIGGTALVLTALITRLVKELIVLLQTLDLHTDQWRELLLSLGRNASIQNIINQINQFYHDNPDYHATIDSNISRTTETVGHAMTQLITGFFNMILKLISALPSMGTILIVIVLAAFFLSTGWDRHNAKLTSLLPAPLLRPVSEIWSDLRKALSGYLRAQLVLISVTGVIVIIGLLLLGVDSAFAIGLTVGIVDLVPYLGVGVVLLPWALYSYMTGNLALAIGLLVLYGIILVTRQVLEPKVLASSIGLDPLTLLVGMFAGLQLFGMLGLLLGPVILVILDAFHRAGVFRALHSYIVSGRLH
>NZ_CP009241.1|WP_038588933.1|2501438_2501837_+|FxsA-family-protein
MIRNKWLWAALFIIPAVELFGFIYVAGYLGAPKTLLLILATSVIGLLMMRFEGKKVLQDSKIQMQEGKVPGRTMLDGLCIFFGGLLLILPGFVTDIIGFSLVFPLTRPLYRVFLLRWIEKKMKNGSFTFYRR
>NZ_CP009241.1|WP_038588954.1|2510696_2511461_+|thiazole-synthase
MQDPFVIGGTPLSSRLFIGTGKYSRNTLIPEVIARSGSQVITVALRRVDPESDDNIVAHIPSHMTLLPNTSGARTAEEAVRIARLARAAGLGNWVKIEVINDQKYLLPDNMETVKATEILAAEGFVVLPYMSPDLSAAIRLKAAGAAAVMPLGAPIGSNRGLQTKELLRILIAEVDLPVIVDAGIGRPSEAAEAMEMGASAVLLNTAIATARDPLLMAEAFREAVTAGRKAYLAGLGPVEEAATASSPLTGFLS
>NZ_CP009241.1|WP_052091967.1|2511490_2512648_+|2-iminoacetate-synthase-ThiH
MSFFDTVIRLEQLPYETLWKQYTAVDVKRALRLEQLDEDGLMALLSPAAEPYLEEMAQKAQRLTRTHFGHVMQLFTPMYLADFCVNHCTYCSFSSIYDFPRKKLTLEEVRQEAETIAATGLRHILILTGESRSESPAAYVRECVKVLRDYFSSVSIEVNPLSTEEYNDLRVAGVDGLTLYQEVYHQETYRKLHVKGPKRVYRNRLDAPERGCRAGFRSVNIGALLGMYDWRQEALATALHARYLQDKYPECEIGLSIPRFRPYLGEFNPASDVTDRALVQIILAYRLFLPRAGISLSTREPAALRDHLVHLGITKMSAGVSTEVGGHTLEGGTPQFEISDGRKVHEITEMLYAKGLQPVFKDWDILTEPLHSPKITPHHQVDSLR
>NZ_CP009241.1|WP_038588956.1|2512676_2513312_-|5'-deoxynucleotidase
MNYHFSAYLYRLQYIQRWSLMRSTAPENVAQHSFQVALLAHMLCSIGNAHFGRSLNADRAAVMALFHDASEVFTGDIATPVKHNNPRLLSSFRDMERAAAERLAAMIPPELSAVYTPLLQPQDSPPGSEDAGLLRYVKAADVLDAYLKCVWEVAAGNREFAAAKEQTATKLRILELPEMDYFLAHMAPGFEMSLDELSAGMSSEPGADSAD
>NZ_CP009241.1|WP_038599227.1|2513417_2515073_+|fumarate-hydratase
MQHFEDSIYNLIVETSTNLPGDVRRAVAKGRALEDRATRSGLALTTIAQNIGMAELQVSPICQDTGMPTFIIHTPVGVNQIEMKKDIHSAIVRATQNGKLRPNSVDSLTGENSGDNLGAGTPVIHFEQWEEEGVDVRLILKGGGCENKNIQYSLPAELEGLGKAGRDLDGIRKCILHAVYQAQGQGCSAGFIGVGIGGDRTTGYELAKKQLFRKVEDINPVEDLGKLEDYIMENANKLGIGTMGFGGEVTLLGCKVGVMNRLPASFFVSVAYNCWAFRRQGVLVDPATGKIREWLYESGTGISVDDAGVPSPEPVAVHAAGAAGSGVVPGDATIPGAPAVLPAAEAAEGAGQPATAGGSREVRLTTPISEEDIRSLRVGDVVILSGEMHTGRDALHKYLMDHETPVDLNGAVIYHCGPVMLKDEEGWHVKAAGPTTSIREEPYQGDIIKKFGIRAVIGKGGMGPKTLKALQEHGGVYLNAIGGAAQYYAECIKKVNAVDFMEFGIPEAMWHLQVDGFAAIVTMDSHGNSLHADVEKDSAAKLAQFREPVFK
>NZ_CP009241.1|WP_038588958.1|2515337_2518319_+|alpha-amylase
MKRKPWLIPVLITSIVLSITMNLFVVPPSQVEAASIGTVTENDTIYQIMVDRFNDGDTSNNATGAAIRYGENSEEDFRYMKGGDWQGVIDKLPYIHNMGYTAIWISPVAEPQMTNRENNGTGKNTAYHGYNVKNPNAANPYFGTKEKLKELVDSAHALGIKVIIDVVPNHIGDYMLGSQAYYDIPALQPAAPFNNTSWYHHNGDINWSLADGRYDQWAQDYLENHDLGGLDDIDFDVPAAKQAVFNSIKGWFDYTGADGARVDAAKLMKPTDIGELQNLLNVNTFGENFDGNAEFVSRWVGNNKEWGMLDFPLFFSVLNSFAYGQSFESNIKSTLALDSLYNGNANHMVTFIDNHDRNRFLTEAGGNVEKLQNALSFIFTVRGTPVVFQGTEQNKGNGNGQIMTGGIADTWNRWSMVKRDASGNVIQNYFNEDASTFKHIAKLNEIRKNNPALRTGTQREMWSAQNLYAFSRRIDTGANVGQEVISVFSNASNGSQTITIPLRAESTLTAGTVLLNQFNTSDKVTVQAGGVTGKQITVTVGANTAKVYSKTQPVSENEPPSVPTNVTATVQNASSVLVSWTASTDNVGVTGYEVYRNGVKVGTTSTPSYTDNGLAGNTSYSYTIKAFDAASNLSGFSLAALVVTPAGNNVTIYYKQGYTTPYIHYRPAGGSWTTAPGVAIPAAEVAGYNKITVNIGAATQLEAVFNNGSGTWDSNGGSNYFFGTGTWTYTPTGNIQSGGPVTPTATPTVTPTPTPTATPTVTPTPTPTPTATATPTPTATATPTATVTPTATPVGNTATIYYKNAAFSNSYIHYKLDGSTTWTTTPGVQMESSSYAGYKVLEIPLGNAAGLTAAFNNGSGTWDSNGGNNYHFGAGSSSLVNGSLSAGEPQADSVTFRVSVPGTTPASGPVYLTGSFNSWNAADPAYQLTKGSDGVYSITLSLPAGTAVQYKLTRGSWAAVETASGGTDIANRTLTPAGGAQTVTLTVQRWKDQ
>NZ_CP009241.1|WP_038588960.1|2518450_2519473_-|LacI-family-transcriptional-regulator
MKVTISDVAKAANVAKSTVSKVLNDSPKISQDTKRRVREIMKQMNYTPSSIATGLARQSSNTVGLLVDMSKGSEFLNQFFYNIIGGIESVIGPLKYELTLCNVQHNDEEGDFLNRLVYNQRVDGIIANNSVLTEELSAQLDQLGFPYISIGESNDPASWVDFDNEAGGRMLTRHLLEQGYSLPAFIGGEPHERIFTSRLNGYLKALNQAGRSAPERFIVNGQADEHEGYRAAMQLLQGSDRPDCIVCMTNYVAFGVLRAARELDIEIPAQLGVAAFDEYPFSRYTTPPLTSLNIDTFKLGVTSGQWLMDLIQSKNTGSRQLLLEPELIARESTLRHIVRN
>NZ_CP009241.1|WP_038588962.1|2519674_2521468_+|HAMP-domain-containing-protein
MKPFRIRLTFILMTMIGISMIGAGLTMAQLFKDSHIAALEENMSREIKLLSGTLQFADMNSSGALNFYTEQAKHISKLTNSRITFITKDGKVIGDSEKDPLQMDNHSTREEEVLAAKEGIGRAIRYSDTLDRQMLYVAGAVVSDQGFDGYIRLSMELNAVTEGLSRAWLIMAGGLVLLFIAATLVSYKVASSMTSPLEQITRVARRITDLDYDARVPMKRKDEIGQLATAINAMADSLQTQLKTIRDNEDLLQSVLDNMTGGIVMINAEGEIALLNRASERLLDVKNSEMAGYSYKEIKHHYELTRLIDEGVTRKEAIHEERSIYNPAERIVRLDGVPMMQDGSYRGMLFLLQEVTEIRRLEKMRSEFVANVSHELKTPVAAVKGFAETLLGGGVTDEKTARSFLQIIYDENERLNRLIGDILELSKIESKRVQLECSPVHLIEFFDSVLGTLSKVAEKKKISLSANVPNELFVEGDEDKLRQIFMNLLSNAINYTHDGGSVKVTVVNGHKADGTETVVFTVSDTGMGIPRKDLPRIFERFYRVDKARSRSSGGTGLGLSIVKHLVELHRGSITVESDLGIGSSFILELPLLQEQAE
>NZ_CP009241.1|WP_038588964.1|2521672_2522401_+|response-regulator-transcription-factor
MAQRLLVIEDEPTLARLLSYNLTQEGYEVTVEDHGTAGYDRATREPFDLIVLDLMLPGMNGIDILDKLRGQGIRTPVIVLTAKNAEEDVVRGLKSGADDYITKPFGVSELLARVSAVLRRISGLAEEVQPEAVVSASTIILGQLEIYPERYEVSLGGVSINLRPKEFEVLLYLARKPGVVLTRDDLMNAVWGFDYIGGQRTVDVHVSSLRKKLELDPESVHIDSIRGVGYKLVVSKKRAPVI
>NZ_CP009241.1|WP_076110646.1|2522541_2523336_+|phosphate-ABC-transporter-ATP-binding-protein
MGNEDDEKETQKLMKSIIDIEKLDLYYESFHALKAVDLQIPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEGKVNISGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGVRAKAELDELVEQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPVSTLKIEELVQELRDKYTIVMVTHNMHQAARVSGKTVFFLNGVIVEAADTELLFSNPKDSRTEDYISGRFG
>NZ_CP009241.1|WP_038588969.1|2523404_2524064_+|phosphate-signaling-complex-protein-PhoU
MIRRKEFDKDLEELRSLLQQMGEHVTDALEGAIVALQTLDTVRAQEIVKADLRLNAMEDRIMEIGSRLIITQQPVAKDLRRIIVAFKISSDLERMGDLALDVAKVTLRIQGQQLIKPLVDIPRMAEIVAVMIDEAIQSYLDENTDLAYKMAEDDDQVDHLYSATINELYTYMVEKPESLNQAMLLTLVGRYIERIADHATNIGESVVYLVTGKRPDLNQ

Crispr_ID: NZ_CP009241_10

• CRISPR_ID: NZ_CP009241_10
• CRISPR_location: 2660911-2661019
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_10

Consensus_repeat	Method
CCAAGCCCCTGAGCAGGTCAAGCCGCG	CRISPRCasFinder

spacers of NZ_CP009241_10

>10.1|2660938|55|NZ_CP009241|CRISPRCasFinder
CGCAAGTTAAATCCCCTGCGTAAACCAACCCCTGGGCAGGCCAATCCCGCCCAAA

CRISPR arrays and Neighbor proteins around NZ_CP009241_10

CRISPR arrays

The CRISPR arrays of NZ_CP009241_10

>merge|NZ_CP009241|10|2660911-2661019|CRISPRCasFinder
CCAAGCCCCTGAGCAGGTCAAGCCGCGCGCAAGTTAAATCCCCTGCGTAAACCAACCCCTGGGCAGGCCAATCCCGCCCAAACCAAGCCTCTGAGCAGGTCAAGCCGCG

>NZ_CP009241|10|9|2660911-2661019|CRISPRCasFinder
CCAAGCCCCTGAGCAGGTCAAGCCGCG	CGCAAGTTAAATCCCCTGCGTAAACCAACCCCTGGGCAGGCCAATCCCGCCCAAA
CCAAGCCTCTGAGCAGGTCAAGCCGCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038589276.1|2673386_2675723_+|hypothetical-protein	unknown	unknown	gnl|CDD|225461
NZ_CP009241.1|WP_156130856.1|2657348_2658332_+|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP009241.1|WP_081966136.1|2654238_2655138_+|hypothetical-protein	unknown	unknown	gnl|CDD|366286
NZ_CP009241.1|WP_038589250.1|2661444_2662338_-|LysR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|223656
NZ_CP009241.1|WP_038589226.1|2651764_2652478_+|glycosyltransferase-family-2-protein	unknown	unknown	gnl|CDD|132997
NZ_CP009241.1|WP_038589234.1|2655226_2656918_-|M3-family-oligoendopeptidase	unknown	unknown	gnl|CDD|341069
NZ_CP009241.1|WP_038589224.1|2651040_2651583_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038589255.1|2663544_2664639_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|270265
NZ_CP009241.1|WP_038589264.1|2667761_2670164_-|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|226957
NZ_CP009241.1|WP_038589244.1|2658436_2659225_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|376540
NZ_CP009241.1|WP_038589253.1|2662548_2663517_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|226361
NZ_CP009241.1|WP_156130857.1|2659451_2660762_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038589229.1|2652543_2653266_-|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl|CDD|369777
NZ_CP009241.1|WP_038589261.1|2666320_2667628_+|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293853
NZ_CP009241.1|WP_038589238.1|2657085_2657421_+|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133381
NZ_CP009241.1|WP_038589270.1|2671030_2672473_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP009241.1|WP_038589267.1|2670163_2670931_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP009241.1|WP_038589231.1|2653286_2653934_-|Vat-family-streptogramin-A-O-acetyltransferase	unknown	unknown	gnl|CDD|100040
NZ_CP009241.1|WP_038589273.1|2672497_2673196_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP009241.1|WP_038589258.1|2664644_2666324_+|iron-ABC-transporter-permease	unknown	unknown	gnl|CDD|224099

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038589276.1|2673386_2675723_+|hypothetical-protein	gnl|CDD|225461	COG2909, MalT, ATP-dependent transcriptional regulator [Transcription].	1.14779e-90
NZ_CP009241.1|WP_156130856.1|2657348_2658332_+|alpha/beta-fold-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.27882e-23
NZ_CP009241.1|WP_081966136.1|2654238_2655138_+|hypothetical-protein	gnl|CDD|366286	pfam00756, Esterase, Putative esterase. This family contains Esterase D. However it is not clear if all members of the family have the same function. This family is related to the pfam00135 family.	2.61459e-26
NZ_CP009241.1|WP_038589250.1|2661444_2662338_-|LysR-family-transcriptional-regulator	gnl|CDD|223656	COG0583, LysR, Transcriptional regulator [Transcription].	6.37417e-51
NZ_CP009241.1|WP_038589226.1|2651764_2652478_+|glycosyltransferase-family-2-protein	gnl|CDD|132997	cd00761, Glyco_tranf_GTA_type, Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.	5.13027e-12
NZ_CP009241.1|WP_038589234.1|2655226_2656918_-|M3-family-oligoendopeptidase	gnl|CDD|341069	cd09606, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3 oligopeptidase F (oligendopeptidase) is mostly bacterial and includes oligoendopeptidase F from Geobacillus stearothermophilus. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids and may cleave proteins at Leu-Gly. The PepF gene is duplicated in Lactococcus lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid.	0
NZ_CP009241.1|WP_038589231.1|2653286_2653934_-|Vat-family-streptogramin-A-O-acetyltransferase	gnl|CDD|100040	cd03349, LbH_XAT, Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.	2.07505e-74
NZ_CP009241.1|WP_038589255.1|2663544_2664639_+|ABC-transporter-substrate-binding-protein	gnl|CDD|270265	cd13547, PBP2_Fbp_like_2, Substrate binding domain of an uncharacterized ferric iron transporter, a member of the type 2 periplasmic binding fold superfamily. The periplasmic iron binding protein plays an essential role in the iron uptake pathway of Gram-negative pathogenic bacteria from the Pasteurellaceae and Neisseriaceae families and is critical for survival of these pathogens within the host. This periplasmic domain (Fbp) has high affinity for ferric iron and serves as the primary receptor for transport. After binding iron with high affinity, Fbp interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ferric iron-binding proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.36521e-102
NZ_CP009241.1|WP_038589264.1|2667761_2670164_-|FtsX-like-permease-family-protein	gnl|CDD|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	3.18357e-07
NZ_CP009241.1|WP_038589244.1|2658436_2659225_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|376540	pfam01381, HTH_3, Helix-turn-helix. This large family of DNA binding helix-turn helix proteins includes Cro and CI. Within Neisseria gonorrhoeae NGO_0477, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family.	5.61887e-15
NZ_CP009241.1|WP_038589253.1|2662548_2663517_+|ABC-transporter-ATP-binding-protein	gnl|CDD|226361	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism].	1.75147e-133
NZ_CP009241.1|WP_038589229.1|2652543_2653266_-|class-I-SAM-dependent-methyltransferase	gnl|CDD|369777	pfam08241, Methyltransf_11, Methyltransferase domain. Members of this family are SAM dependent methyltransferases.	9.08866e-27
NZ_CP009241.1|WP_038589261.1|2666320_2667628_+|MBL-fold-metallo-hydrolase	gnl|CDD|293853	cd16295, TTHA0252-CPSF-like_MBL-fold, Thermus thermophilus TTHA0252 and related cleavage and polyadenylation specificity factors; MBL-fold metallo-hydrolase domain. Includes the archaeal cleavage and polyadenylation specificity factors (CPSFs) such as Methanothermobacter thermautotrophicus MTH1203, and Pyrococcus horikoshii PH1404. In addition to the MBL-fold metallo-hydrolase nuclease and the beta-CASP domains, members of this subgroup contain two contiguous KH domains. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. .	2.2334e-43
NZ_CP009241.1|WP_038589238.1|2657085_2657421_+|MerR-family-transcriptional-regulator	gnl|CDD|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	5.7582e-20
NZ_CP009241.1|WP_038589270.1|2671030_2672473_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.13333e-49
NZ_CP009241.1|WP_038589267.1|2670163_2670931_-|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	5.68137e-94
NZ_CP009241.1|WP_038589273.1|2672497_2673196_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.23597e-91
NZ_CP009241.1|WP_038589258.1|2664644_2666324_+|iron-ABC-transporter-permease	gnl|CDD|224099	COG1178, ThiP, ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism].	6.01649e-72

Protein sequences

>NZ_CP009241.1|WP_156130857.1|2659451_2660762_+|hypothetical-protein
MKKAVLCSILFMFIMGSLIPGVGAAANSVYPSDNGPRQSSYAAPLAKPELKWAVPFTGEIKQVVIDSAGILYVLSEGVRVVKLTSLRASGEILWSKEIKGVEANALNLSNDKFLIVSSSLDGRELTDSSRLNDRTAIVSKYTIAGELLWENTYEYVMRLGNITVGDDGYVALALSYFTQASGSKRYTEHVKLIGMNASGETKFNNTMVSDTETVPVYFSAPLIVKDNVYLSISKGFMRPYSSRAMIAEFTDAQFLKISKQGVLLSSTKYKGIIPYAPVYYNNNFYVSGEPYGGDNNLYIINTAGKITKTISVEAGHIGNQIPASISTDGHIVFAQHVYSPAGKLLWSFQPTVKGKVYRFYPYSVPGLTLDSSQNIVFSGYDSLYGGAYISSINMKTKKINWSLPINTDARSPIIIGKDGTIYVWGNKLYAYGKKAS
>NZ_CP009241.1|WP_038589244.1|2658436_2659225_+|helix-turn-helix-transcriptional-regulator
MDFADKLQGYRKQRGMSQENLAEVIGVSRQAVSKWESGQSYPEMDKMIALSKFFGVSMDHMVKEVSGNQETVPPLDAGNFHADVTAKYHYEYKSKRTLLGIPLVHINVGRGIYVAKGVLAIGNIAVGGLSVGILSLGGLCFGALAGGMISIAGLALGLLLAIGGLAAGIIAIGGLAVGIFAIGGLSIGMFSLGGCAVASRIAIGGYASGHIAIGDVAKGAYTILVEQDHFSSIQAEQVRGLINQEYPRLWKPVAEGIIAIFE
>NZ_CP009241.1|WP_156130856.1|2657348_2658332_+|alpha/beta-fold-hydrolase
MQIYFFVTEIHMHPCYHRFSKGVLMLKTKLIPPPGKLIRVKGKQMHIRISGLPGGKTVVFDHGCGYGSYSDTWSLVEEKVAPFAQTVVYDRAGYGWSEKGSVPRNNEEAVEDLHELLQAAGVRQPFIYVGHSYGGVNARLYAERYPENLAGIVLADASHEDELTDRFPREHVKGQKSGIWMFRMLYWLTRAGILNWLLQRNKLKDFEALLKHFPEPIAERMRLMTPQRATGLAVYQEFKNLQLGYDAVRNKSLPAGLPLLVLKSGKVEHLEKLPSGIADKITSCLLDVAEEMSQLSDQGELVVVEDSGHNIHIERPDAVAQGIRQML
>NZ_CP009241.1|WP_038589238.1|2657085_2657421_+|MerR-family-transcriptional-regulator
MLYGVKETAALSKVTVKTLHHYHKTGLLMPCEISEAGYRLYGTEELERLQQIIFQHKRSRVISKRTAELYAPIFRQARLSVWRFLVISCKSIFLSRKSICIHVIIGSAKEC
>NZ_CP009241.1|WP_038589234.1|2655226_2656918_-|M3-family-oligoendopeptidase
MKFTEYPYERPDANKFKLEFTALLKGLEADNWEEQKAAILALNKLRSSFETMTSLVYIRHSINTEDEFYKAEQDYVDEISPIVQEYITEYYKALVNSKFRAEIEKEWSPQLLQLAEISLRIFSPEIIEDLQLENKLSTEYSQVIASAKIQFDGEERTLSQLTPFETATDRDTRKRAYLAKNEFMAAHEAEFDRIYDELVKVRTRIAKKLGYASFVELGYDRMMRTDYNAGMVANFRKQVLEHIVPVSLKLKQRQSERLGLDALKYYDEGFNFNTGNAEPKGDPEWIVANGAKMYKELSPETDEFFTFMKNNELMDLTSKKGKQFGGYCTYLSQYQAPFIFSNFNGTAGDIDVLTHEVGHAFQVYSSRNMLLPEYEFPTSEAAEIHSMSMEFFAWPWMDLFFEQDADKYRFNHLASGLEFIPYGVSVDEFQHFVYENPEATPLERKQAWRAIEKKYLPHRDYDGNAYLEQGGFWHKQGHIFRSPFYYIDYTLAQLCAFQFWKRSNEDFKSAWSDYLRLCEAGGSQSFVQLAQLAGLISPFEDGCVSSVIGEIEGWLNSIDDKAL
>NZ_CP009241.1|WP_081966136.1|2654238_2655138_+|hypothetical-protein
MFIGGCSSDNNPITAQASSPASKEKEGTSPLQSSEIQKVSFQSESLDQEMKLNVYLPKGYSPEQRYPVLYLIHGYGGNETDLLSGLEVDQNADRLIEAGKIEPLIMVFPQMDNSYGLNTSPNYAVDYPGDPMTTYSGMYEDYLYKDVVGYVDQHFSTITSRDGRFIGGVSMGGFISLHTAFLHTDLFSKVGGHSPALFQDDWSQAGGENGVKRFLYPTDEDRQTRDPLIFAEDLDLSELEVYLDCGDQDHYKFYDGAEQLTKLLESKKVSVQYHLGQGAHEAEYWKSNLDNYLLFYAGK
>NZ_CP009241.1|WP_038589231.1|2653286_2653934_-|Vat-family-streptogramin-A-O-acetyltransferase
MVGPDKNKLYPNENIKTVCYIRNLPARANVEIGDYTYYSDNNDSPEHFYEHILHHYEFLGDKLIIGKFCAIAEGVTFIMNGANHRMDGLTSYPFNIFGGGWEKVTPTLEQLPFKGNTVIGNDVWIGQQVTIMPGITIGDGAIIASNSTVTKNVEPYSIVGGNPARLIRKRFSDKLIGLLSKVQWWNWDEHKLFQHLELLVSGCDEEELQRLLQED
>NZ_CP009241.1|WP_038589229.1|2652543_2653266_-|class-I-SAM-dependent-methyltransferase
MHKESVSLDSYEEMAEYYLNYVDKKPYNAYYERPATLSLLPEVEGKSVVDAGCAAGWYSDWLLGKGASVTALDFSPKMIEMTRRRVGDRAKLVCADLNEPLDFIGDDSTDLVISSLALHYLKDWTLVMREFHRILKPGGFLVFSVHHPFMDFTVFQRENYFLTELLEDDWDVNHVKVKVQFYRRPLNAIMSAVLHAGFILEELLEPMPTEEFKQALPQSYEKLLRKPQFLFIRARKASEH
>NZ_CP009241.1|WP_038589226.1|2651764_2652478_+|glycosyltransferase-family-2-protein
MGKAADPYGVSIIVCTNRPQFFDNLLGSFRSQQYKTKELIIILNRNSMNLKQYQSKIRAYPNISVYKVPEKTSLGQCLNCGIAKARFPFIAKFDDDDYYSPYYLKEQMSALKRTKSDIVGKHACLVYLSGTKRLIIRSPREKNKAADFVQGGTLLFSRQVTRQVRFSDRSLGEDVAFLRRCSAKGYRTYATSPYNYVYMRRENKGSHTWKVGDRFYLKGSIPVAVTDNYRAIAKRKV
>NZ_CP009241.1|WP_038589224.1|2651040_2651583_-|hypothetical-protein
MLPMAELEDKRPYPINLLIALLTVAYLAYAFLTSNNYGNLTVSLEHDFSNILYHNKDTTTLYLYYYDDGLEKPVIVYSLFIIVTSLLLLVSFLIRRTLSTFLLLCFYVFSFFLMAYPYYHLRMTGDYMFLTSLHFLFLTSYVNEYSLYYFIPYYAVLIGLTLYFIVSQLPLRQLRSSRSR
>NZ_CP009241.1|WP_038589250.1|2661444_2662338_-|LysR-family-transcriptional-regulator
MNLNLIKLQIVELLHKHRKITTVAEELGLKQPTVTYHLKNLEQQLGEKLFESRMDKMILTESGKAFLHYAVKINALAAEAERVVKEFSNAGRGTLKIGASYVPATYILPQILGQFGEQHPGTTISLSVKPSPVIKEMLVNHEIDLGILSTESFYVPTLHSQSLCEDELVLVFAPTHEFAAQTRLSPSEIASAHFILHDMESSTRQLTNKWFERSGVTPRAHILLDSLEAIKQSLMGGRHVSFISRLAVEDEVARGKLMMRTIPDYNFQRHIFYSYNRDRHYSPLIGLFIDLIRTIRI
>NZ_CP009241.1|WP_038589253.1|2662548_2663517_+|ABC-transporter-ATP-binding-protein
MKQLIISGLEKKFGDVHALKPADLTIAAGSFTTLLGPSGCGKTTLLRLLAGLETPDAGEIVADGELIFSSSRKISQPIHRRNFGMVFQDFALWPHLSVFENVAFGLRASRQKKELRSRVQEALRSVRLEGLELRFPHQLSGGQQQRVAFARAVVTRPRLVLFDEPLSALDAVLRDEMRLELLSLVKDMGITALYVTHDQTEAMSMSDEVVVMHGGSILQTGAPEEIYKKPAEPFVARFIGRSNWIVPGKQMLRPEQLRWIDREGTSQAFTGIIRHVSYMGDRYEVILEMQGMGTWTAYHSHRLTVGESIQVYASQEHIHHLN
>NZ_CP009241.1|WP_038589255.1|2663544_2664639_+|ABC-transporter-substrate-binding-protein
MNFIKKSKLGSVLLTAVLSISLAGCGSSNTPEANAKANDSKTKNNNTPTATEQASPPAENTLSGSLVVYSAGPEGLANKIKEGFEAKTGVKVEMFQGTTGKILARMEAEKSNPVVDVVVLASLPSMQGMKNDGLLLPYQEAVNAGKLVSDWSDAEGNYFSYSASALGIVYNTKKVTTPPASWADLGQPEWKGVVNIPDPSLSGSALDFMTGYLSAQGDSGWDLFKQYKANGVAMAGANQEALDPVITGAKSVVAAGVDYMAYKAKADGEPVDIVYPAEGTVISPRPAAIIKTSANVDNAKAFIDYLLSDEAQALVAKAYLLPGRSDVKAENRANLDEIKTFDVNWDWMNEHGDEVSTTFTDLFK
>NZ_CP009241.1|WP_038589258.1|2664644_2666324_+|iron-ABC-transporter-permease
MKINALRSFKWVSSSLALCILAILVLLPLLLIFWTSIYSGQKLDITAPLRTITGNSGLMKVLLNSLGLGASVVALTTVFALPLAWIMAKSDIGRHAWLDVVLLIPFMTPPYIGSMGWMLFMQTGGYMEQVLPSSAALTPYFFSYGGMVLIMSLHLFPFLYLLLRNALLQIGGGLEEAASVHGAPFFYKVRRVIVPLLLSSYGLGVLLIFVKTIAEFGTPATFGRKIRFYVLTSEIHKYISSWPIDFGKATSLASLLLGVCLILWYIQTIISSRYSYRLVGGKGIRSKHYAAKGALGFFSWGYIVLLLLASVGVPYFSIITASLLKLRGEGLSWGNLTLSHYAELLSPGSPGLQALINSFSLAIVASSIAVILGTWLALIIGKGTAWRQKWTDLFSLLPNTVPGIVLVVGLILLWNARWMPVPLYNTYGMVVLTYVVLFLPYTVQYVKASYGQIDSSLMQAGQVFGGSKTYVFRRILLPLILPGMAAGWMMTFTISGRELVASLLILPPSMQTSATYIFAQFEQGAVAMGMAMAVISVGVTTALLLVIQYLSPDRKRRQL
>NZ_CP009241.1|WP_038589261.1|2666320_2667628_+|MBL-fold-metallo-hydrolase
MTKLTIWGGAGEHGRSSYLLQGKEACILLDCGVKKEGKGEYPLLDAAVIPQLQAVFLSHAHEDHSMALPLLYKYGYKGKVWTTRDTVRQLPGYFEAWSRYAAAESARLPYGDEDKQAMEFMFLDEQAGPRSWLNVAPGLRVQWGRTGHLAGAVWLALEWEGKTVYFSGDYTEESQLLAVDRPQALFLSGPEAGREQGDADLAIIDAAYGADPEEQHVKLLQLETAVRDTLEGSGCVLLPMPLQGRGQELLIWAAERFPQAQLVVEEALLAPLRALRTRSAWLRDEASGCIEQLLNSRNLEAVSSPSERKEALRQRKNKIIFTNDALLQSPTAQWYYRQLLDVPGSHVIFTGHLPEGSFGRNLLGQQGSGSCMVSLIRYKVHQGLPDIRRMLRAVPSRRTVLVHAPKKQTDQVLSILEEEGFTGLYSLLPGDSISF
>NZ_CP009241.1|WP_038589264.1|2667761_2670164_-|FtsX-like-permease-family-protein
MHAIMTICWGNLRKRKVQNSLIALLILLSTLLTNTAITVISNSEDLYESLHRDTKGSHELLMFSRGLHNPQKSAQWWSQQDGVTASVLLPYKPLAGVKHRGEDIPNLYLYMMNTPDRPFGTDELVFAQGPETAHPEQGTIWIPTSLAYKYDVSIGDELQFKTGNTPLSLTVSAVVIDLPLGGPFSTTARIWMNSSDYQQDLSSVQDTDSYILGLRFADYSQRADYWERFEKFLGTPFMEEMNSYEQISAFYFIMNKIIGFVMSFLGIVMMLVALFTISFTISDAILANYKTIGIFKSMGLTSRQIIGTYVAQYSFLALLSILPGLWISRFLSGVIIEQSLSFLKTDHSSIRLQGAWTDWMVGAGMLLLILVCVWIYASKTRSIQPMQAIRYGMSEASHSSLGKRSKGRGKRGREFERWPVPAVIGLRNVTKNLKGSILMLILTTVTTSVLVFGFVLLNSIYQMQKTSPLWGYDASDIVVMVVNEADFDREALNAEVKADPAILNLNWAGQSIGVVSAETMRSSGKVDDVSQSLSIPLNAVEGSLDEVGFASINGRNPVNRNEISIGINISRQLGKELGDVIELYVEGERHTFTVTGIYQSIANMSNQARITSDALTQFHPDTAYLNLINDDDAEKIVQQLNDKYGPGIQAIKQQTLLDSVFKEATAVLIIPMSILSLLFLLVTCLIIYSTCRIHIRKETKTYGIYKSIGLTSNNIRGAVTWSIVALSAAGAVLGIGCGVFLLPGILRGLLSSYGIVKLPLLMQWAGISFLALLSITVAGLGCWIASSVIRSTSPRVLVTE
>NZ_CP009241.1|WP_038589267.1|2670163_2670931_-|ABC-transporter-ATP-binding-protein
MPKTAILHTKNLCKTYSTGSEQFHAIRNIDLDIYQGDFTVIMGDSGSGKSTLLYLLSGLDTVTAGEVHFSQQRMDSFSEKELSGLRARKIGYIYQSSNLVPDLTLLENIALPGYVAARPRREVKQKALSLMKAMSIEEQQHRLPAEVSGGQQQRAAIARALINTPEIIFADEPTGSLNYDQGVAVLDILTSMNAEGQSIVMVTHDIKSACRANRLIFIRDGQVGGVLELGAFTPDQLQDRESLIFSYISREGSHT
>NZ_CP009241.1|WP_038589270.1|2671030_2672473_-|HAMP-domain-containing-histidine-kinase
MYWRNWFKPWFASVIACIVIMGGCAAFIQYRLSATEQDVLPDEVVNQARIEISGIMLVLEQHHTEVSSQNRIREELRKWSEEKQLHLQYTGLDGTLLFDSSAPHSMNKDKLNLKSDLHYDLYSSKTAQEMFKLAFPVVDPDSGVQAGNAIFTLPGSLLAYRQTASFPAMFTLLMIALLLVLLLLFRLRYKINHDLLHPVNGLKDHAEAILKGNYGQKAEYAKQDEIGEVYAVFDQMRSEIMTLSMQKEAQSKAQKELISNISHDLKTPLTIVKAYIEAIREGVCSDLPAVMAYMEIMQAQANKMAMLVEDLLVHALRDLDQISVHPVEHYSKEIFESILRPMGPYIRTAGVEFTEPSEIPNVLIRIDPVRIEQLLSNLIANALKHTSAGDTIRVAIVQEQHQLTVTVSDTGEGILPQDMPFIFERYFQGHAPSQFEKRFNEGSGLGLSICKHIIEAHHGTISFKSAKHQGTEFYFTLPIC
>NZ_CP009241.1|WP_038589273.1|2672497_2673196_-|response-regulator-transcription-factor
MQQRKRILIIEDEQDISRILKDYITLQGFDVHIADNGVDGLRLLEAVQPDFIILDIMLPDANGIELCRQIRDKTRTPILILSARSSDTDKVLGLGFGADDYMTKPFSLSELVARIQAHLRRMESLGNPLPQDELISIGTLTIDKKAYKVTQGGREISLSAKEFELLFFLAEHRNQVFSKSQLLDQIWGYTSYGDESTITVYIRRLREKLEADPSNPEYLKTVWGVGYKFNLD
>NZ_CP009241.1|WP_038589276.1|2673386_2675723_+|hypothetical-protein
MIESTKLHIPHGRNSLVPRPSLMNKINEGMTARLTVVSAPAGYGKSTALSEWVKYSGSRAAWVSLDKQDNDWITFWSYVAAAVEEQIPGFGARIRPLLKKGSSIFSEPALDVMLNEFRETAADLVIILDDYHFISLPEIHDSLVYLLQHLPPHIHFFIAGRTDLAILSSIITEAVTVHKITMQDLSFQLDEGMIFFRETTDLRLTKKQVTQLYHQTEGWISGLQLAAIALKSSDNIPRSIDGIRGQHQDISRYLLEEMFSHLPEPIRVFLLETSILSRMNHSICEVVTGQPDCQEQLESLEQLNLFIIPLDDQRNWYRYHHLLSDFLQEQLTAEDPAKITEAHIHVAHWWEHYGFEAEAVEHYLEGEQYEDAVRLIEKNILHLLQSRSVVLNRWLSVIPEHYFAGKPMVEVFYISVLLGVGKWEAAFNRIKQAEVSFQTLQATLSEQAFHQAMGNIYFMCSVSAYLRKDLVSMSKYFEEMEQHIPEGSFFQTMGRNRHQGYDAFDDHLVYINDLHYAEETLVKWITVWESKREYPFVGFLFVSYTKLLYEWNRLEEAAISIHKALKREDIKPYARILIHLTVSAVRIHTAQGDPEGASELLSGLGSQIDSPDHLLFMKRVEAEQAFLALEQGRVEEARAWLQSCDVTFTDEVSPNLVAEHLILARVLAACEQSDNALQLLERMYQLLCKEDRQRGQIQVLILQSVLYQGMGLTETALVKLGAALQLAQPQGYIRSFIDEGTAMKELLTSYLKLGRESNMRKRTEVSTEYVERLLQSFE

Crispr_ID: NZ_CP009241_11

• CRISPR_ID: NZ_CP009241_11
• CRISPR_location: 3155935-3156025
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_11

Consensus_repeat	Method
TTCGGAAGCAAACACTTAGTTTTGTGA	CRISPRCasFinder

spacers of NZ_CP009241_11

>11.1|3155962|37|NZ_CP009241|CRISPRCasFinder
GCAATCGCTCCTTTGTTTAACTTCATCGCAAAACTGT

CRISPR arrays and Neighbor proteins around NZ_CP009241_11

CRISPR arrays

The CRISPR arrays of NZ_CP009241_11

>merge|NZ_CP009241|11|3155935-3156025|CRISPRCasFinder
TTCGGAAGCAAACACTTAGTTTTGTGAGCAATCGCTCCTTTGTTTAACTTCATCGCAAAACTGTTTCGGAAGCAAACGCTTAGTTTTGTGA

>NZ_CP009241|11|10|3155935-3156025|CRISPRCasFinder
TTCGGAAGCAAACACTTAGTTTTGTGA	GCAATCGCTCCTTTGTTTAACTTCATCGCAAAACTGT
TTCGGAAGCAAACGCTTAGTTTTGTGA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038599476.1|3153748_3154612_+|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|180744
NZ_CP009241.1|WP_052092011.1|3158773_3159448_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|223943
NZ_CP009241.1|WP_038590124.1|3154642_3155044_+|DUF4265-domain-containing-protein	unknown	unknown	gnl|CDD|379459
NZ_CP009241.1|WP_038590137.1|3156692_3157727_+|HD-domain-containing-protein	unknown	unknown	gnl|CDD|225116
NZ_CP009241.1|WP_038590118.1|3151128_3151920_+|DUF2837-family-protein	unknown	unknown	gnl|CDD|378535
NZ_CP009241.1|WP_038599481.1|3159536_3160061_+|putative-metal-dependent-hydrolase	unknown	unknown	gnl|CDD|183954
NZ_CP009241.1|WP_038590152.1|3163826_3164510_+|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP009241.1|WP_038590149.1|3162934_3163675_+|cupin-domain-containing-protein	unknown	unknown	gnl|CDD|380440
NZ_CP009241.1|WP_038590113.1|3148097_3149453_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|376899
NZ_CP009241.1|WP_038590110.1|3147346_3148123_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224059
NZ_CP009241.1|WP_038590155.1|3164506_3165766_+|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP009241.1|WP_038590131.1|3155565_3155871_-|Dabb-family-protein	unknown	unknown	gnl|CDD|214884
NZ_CP009241.1|WP_052092010.1|3151981_3152794_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038590134.1|3156071_3156533_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038590121.1|3153138_3153729_+|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	unknown	unknown	gnl|CDD|273139
NZ_CP009241.1|WP_038590146.1|3161174_3162767_+|diguanylate-cyclase	unknown	unknown	gnl|CDD|143635
NZ_CP009241.1|WP_038590143.1|3160141_3160996_-|alpha/beta-fold-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP009241.1|WP_038590140.1|3157930_3158671_+|GTP-pyrophosphokinase-family-protein	unknown	unknown	gnl|CDD|225232
NZ_CP009241.1|WP_038590128.1|3155066_3155561_+|signal-peptidase-I	unknown	unknown	gnl|CDD|274044
NZ_CP009241.1|WP_081966169.1|3149479_3150961_+|serine-hydrolase	unknown	unknown	gnl|CDD|365903

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038599476.1|3153748_3154612_+|SDR-family-oxidoreductase	gnl|CDD|180744	PRK06914, PRK06914, SDR family oxidoreductase.	2.74471e-141
NZ_CP009241.1|WP_052092011.1|3158773_3159448_+|HAD-family-hydrolase	gnl|CDD|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	2.10652e-20
NZ_CP009241.1|WP_038590124.1|3154642_3155044_+|DUF4265-domain-containing-protein	gnl|CDD|379459	pfam14085, DUF4265, Domain of unknown function (DUF4265). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 139 and 168 amino acids in length.	6.16138e-06
NZ_CP009241.1|WP_038590137.1|3156692_3157727_+|HD-domain-containing-protein	gnl|CDD|225116	COG2206, COG2206, c-di-GMP phosphodiesterase class II (HD-GYP domain) [Signal transduction mechanisms].	1.2514e-42
NZ_CP009241.1|WP_038590118.1|3151128_3151920_+|DUF2837-family-protein	gnl|CDD|378535	pfam10997, Amj, Alternate to MurJ. This bacterial family of proteins has no known function. However, family members include lipid II flippase Amj, which is required for bacterial cell wall synthesis. It transports lipid-linked peptidoglycan precursors from the inner to the outer surface of the cytoplasmic membrane.	8.35544e-102
NZ_CP009241.1|WP_038599481.1|3159536_3160061_+|putative-metal-dependent-hydrolase	gnl|CDD|183954	PRK13291, PRK13291, putative metal-dependent hydrolase.	4.23374e-70
NZ_CP009241.1|WP_038590152.1|3163826_3164510_+|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.63299e-68
NZ_CP009241.1|WP_038590149.1|3162934_3163675_+|cupin-domain-containing-protein	gnl|CDD|380440	cd20306, cupin_OxDC-like, Oxalate decarboxylase (OxDC)-like cupin domain. This subfamily contains bacterial and eukaryotic cupin domains of proteins homologous to oxalate decarboxylase (OxDC; EC 4.1.1.2) such as MSMEG_2254, a putative OxDC from Mycobacterium smegmatis. OxDC is a manganese-dependent bicupin that catalyzes the conversion of oxalate to formate and carbon dioxide, utilizing dioxygen as a cofactor. It is evolutionarily related to oxalate oxidase (OxOx or germin; EC 1.2.3.4) which, in contrast, converts oxalate and dioxygen to carbon dioxide and hydrogen peroxide. OxDC is classified as a bicupin because it contains two cupin folds with each domain containing one manganese binding site, with four manganese binding residues (three histidines and one glutamate) conserved as well as a number of hydrophobic residues.	4.37944e-53
NZ_CP009241.1|WP_038590113.1|3148097_3149453_+|ABC-transporter-permease	gnl|CDD|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	0.00754331
NZ_CP009241.1|WP_038590110.1|3147346_3148123_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224059	COG1136, SalX, ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms].	6.08269e-106
NZ_CP009241.1|WP_038590155.1|3164506_3165766_+|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	3.20393e-35
NZ_CP009241.1|WP_038590131.1|3155565_3155871_-|Dabb-family-protein	gnl|CDD|214884	smart00886, Dabb, Stress responsive A/B Barrel Domain. The function of this domain is unknown, but it is upregulated in response to salt stress in Populus balsamifera (balsam poplar). It is also found at the C-terminus of a fructose 1,6-bisphosphate aldolase from Hydrogenophilus thermoluteolus.It is found in the pA01 plasmid, which encodes genes for molybdopterin uptake and degradation of plant alkaloid nicotine. The structure of one has been solved and the domain forms an alpha-beta barrel dimer. Although there is a clear duplication within the domain it is not obviously detectable in the sequence.	1.21491e-20
NZ_CP009241.1|WP_038590140.1|3157930_3158671_+|GTP-pyrophosphokinase-family-protein	gnl|CDD|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	2.80433e-85
NZ_CP009241.1|WP_038590121.1|3153138_3153729_+|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase	gnl|CDD|273139	TIGR00560, pgsA, CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. Alternate names: phosphatidylglycerophosphate synthase; glycerophosphate phosphatidyltransferase; PGP synthase. A number of related enzymes are quite similar in both sequence and catalytic activity, including Saccharamyces cerevisiae YDL142c, now known to be a cardiolipin synthase. There may be problems with incorrect transitive annotation of near homologs as authentic CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase. [Fatty acid and phospholipid metabolism, Biosynthesis].	5.32682e-39
NZ_CP009241.1|WP_038590146.1|3161174_3162767_+|diguanylate-cyclase	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	1.91954e-62
NZ_CP009241.1|WP_038590143.1|3160141_3160996_-|alpha/beta-fold-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.43428e-12
NZ_CP009241.1|WP_038590128.1|3155066_3155561_+|signal-peptidase-I	gnl|CDD|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	3.11485e-40
NZ_CP009241.1|WP_081966169.1|3149479_3150961_+|serine-hydrolase	gnl|CDD|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	8.51429e-70

Protein sequences

>NZ_CP009241.1|WP_038590131.1|3155565_3155871_-|Dabb-family-protein
MFEHLVIFKFNEHYEPQKEALLVQTLLGLKDQIPGILELTAGVNVTEETENMHGYTLGLRVTFADQEALRQYGPHPAHRHFVELLEGIIENVVVVDYPIAK
>NZ_CP009241.1|WP_038590128.1|3155066_3155561_+|signal-peptidase-I
MKKFLKQWVPSILIGVVLSLFIRTYVAEAMRVPTDSMDPTIEVNDRLVVEKMLWLTTLKHGDIVVFIPPVEGVQKKYVKRLMGLPGDTVEIKDGALFRNGEKLDEPYLKETMNYTFGPVTVPADHYFFLGDNRNVSYDAHLWPTPFVAKDKLIGKMLVDLSDLF
>NZ_CP009241.1|WP_038590124.1|3154642_3155044_+|DUF4265-domain-containing-protein
MPDTVGLHICFDELGREIEILDVTPVARDKYRIEETPIFNPGIALGDIIRVKEKQGISYYVETVEKSGFRRYAWLLSKEAASSKEIRDMKQRIEDDEGRTEQIFGGLLVIHMPYSSGIDVEGEMARIIERFEL
>NZ_CP009241.1|WP_038599476.1|3153748_3154612_+|SDR-family-oxidoreductase
MHTNKQPYDKIALITGTSSGFGMLSALTLAEKGYQVIASMRDLSRKDELVQQAEQAGVLGRIHLVTMDVTDTASIESAVSEIIEQFGRVDVLVNNAGFAVGGFMEEVSMEEWRRQMDTNFFGLVEVTKNIIPLMRKQQTGTIINVSSVSGRFGFPGYAPYAASKFAVEGFSESLRQELSSFGIRVVLVEPGSFRTPIWGKGIAGIQSLADSPYKEKLEEVLRYSRRTAETAPDPRQVAELIGRIAAMSAPKLRYPVGKGTRTLILGKTLFPWKTLERIIARSLAKLK
>NZ_CP009241.1|WP_038590121.1|3153138_3153729_+|CDP-diacylglycerol--glycerol-3-phosphate-3-phosphatidyltransferase
MNLANKITVTRILMIPVFVMLFPIYPDGLVSKSALLQHIDLYGVYYAAAVFTLASVTDKLDGYIARKYNQITNLGKLLDPLADKLLISAALILMAGRHDIAAWVAITIIGREFIITGIRMTASAQKIALQADKSGKLKMVFQVAAISAVLLNNWPFSFITAIRIDQMLMYCALVLTVYSGYLYIKNNYRILKLDQH
>NZ_CP009241.1|WP_052092010.1|3151981_3152794_-|hypothetical-protein
MIYSAGKESSRNRKAAPVYFRRLAGLLIVLVLLTGNIPLAAAAGDWDSALEEFHDLYEDYTGLQVTLKAEISRNQTLRKQNTSNLSAINSQLQSINQTLLNRLKSEAEATQKKHAPLLEQYTTLGKQASAARKANNQKSAASLNLKRNKLKVSATAARAEIKVKTTALAEARKSTAAKIKPTKDALAPVSALRKQITAENKKVSELQAIRSEADKRYKAAVKAGDAVAAAAGMKLSYAKMSEIRVMVQQMYSWEQKISAALRTAESKIPK
>NZ_CP009241.1|WP_038590118.1|3151128_3151920_+|DUF2837-family-protein
MTNSLIVVCLLTMIIHTAETLSYSVRFAGVKLNKIAIALSLTGIIVLVSRTANMIQAPLTAKFVDFAKTHPDFPLINYLRIIMLASSLGTLIAIAIFPTFVGLFGRVISKLEVEGSIPKLLTSVTIGQLKNTRKYIKKPKIKLPSFRYLGIPKRFIIMNIFVTAFYTVGVLSSLYAAHLSPEFSTTASQASGLINGLATILLTIFIDPQLGIITHKATEHLEYRDQLGKIYVLLMGARFLGTLLGQLVLEPASYFISWLVQLI
>NZ_CP009241.1|WP_081966169.1|3149479_3150961_+|serine-hydrolase
MIAILLLSASGYSQTTANADSGDSNKKIQKIESFVEEQRSKSKTPGISLVIVEKGKTIYQKGFGYADVKTKKPVTGDTLFEIGSTTKAFTGLAILKLEKEGVLKLTDDVKKYIPWLELTYNDEPQTITLNQLLHHTSGIASNTIAHIPEGNTNEALELTVKTLLNQQLDRKPGSSFEYATINYDVLGLVIQIVTKMPYDIYMKQHILEPVGMKDSFVGLHQSQSAELATGYKIGFMKEQAYSPPIYRGNIPAGYIISNANDIAKWMNLQLGTDPSNVMDKQLIKESHVPDQTVEPFDVNTYYASGWGIQTKKDKQYIFHAGENPTYTSYFIMQPDEQLGVAILTNMKTSFTTAIGQGVMDLWEGKEVTNNHSDSYQNLDRIVTIVCIAVGCFGVLFIFLIIRVMVKLARKQRIWTKLNVKRILLLLLHTLIIAAGLTLMIMFPKILLGGLPWAFIKVWAPTTIWVTLCSAIAVCIIYYIFGLMLIFSKKMKVS
>NZ_CP009241.1|WP_038590113.1|3148097_3149453_+|ABC-transporter-permease
MTFRSLALSNIRGNWRSYGAFFMSCVFSVMIFYMYAAFLAHPNLSSGHILGSVQVRQGMLFCQYIIVVFSFLFVLYSSSAFLKSRRKEFGLLSLFGMTHRQLLILIILESTVITITAIGAGIGLGIFFSKPFFMALAVLLGLKDPIPVAIPLRSVCMTAGSFFMLFTLISLGTALRARRTEIVVLLNAAGGPKEKPVYSPWLAVLSVVCIAAAYIMALMLNVKNFNMLALYILLTILPGTYLLFTQFSGLLLRFIQSCTAIYYNRTNLIVFAQLDQKLKENARMLFIVSILSSVILTASGTIYMLGLAVQLDDIKTQYDDAQGVISLTMFIGVFISLLFFIAAGSLIYFKLFTELQENQAQYKALTRIGMSSGELRRIVVTQTGILFFVPCLVGIVHALVALKALDNLLMVSNWLYSFVIIGIYMAMQTIYFLVACSSYMKIIKLTKEHQL
>NZ_CP009241.1|WP_038590110.1|3147346_3148123_+|ABC-transporter-ATP-binding-protein
MTLLEAQGLSKIYSSKGNVVCTALHDIDLRVESGEFVGVMGPSGSGKTTLLNLLAAIDRPTAGYIEINGIDPSKLSNKNLAFFRRRELGFIFQDFNLLDSLSIKENIILPLVLEGVAPKLIEHRLYMIAERLEIAKLLNKRTYEVSGGQKQRAAIARAFINEPSLMLADELTGNLDSKSAKDVMDSLKELNERLKATVLMVTHDPFSASYCQRIVFIKDGRIFSEIRRGSNRQTFFQQILDALSVLGGNFNDVPFARA
>NZ_CP009241.1|WP_038590134.1|3156071_3156533_+|hypothetical-protein
MPDTFATNIKFPFALRSMLGMVFLIAIEIQMIYINSSNTAHPHPVLSYFVVIWLCVCGLLLLFFMFQSLRKATEIKWGRESIFLRNRRLLPGEIKWIMVDGPLIGIMPRGKRIVPVNLCFRFMDDREQAMKGLTSWAEVNGVQLKYKRFLKWM
>NZ_CP009241.1|WP_038590137.1|3156692_3157727_+|HD-domain-containing-protein
MKVHVTDLKNGDCLITDTFNSLGLHVLPKGTVVEREEITILMRHKIDYVDIEARLLSRDGEDADLTHGLNEDFDLAIQNYESIFMEALAQGSFSPSMVDGTLRPLLETLDAQKDVVSLLLLLDRDDIDTYQHSLLVGMLSYYIASWLGYSKEERYMISRAGYLHDIGKSQVPLSILNKVGLLNAIEEDELRRHTSHGYDIIRSSMKDEGTALVALQHHEFEDGSGYPNMIRKGEIHPYTEIVTVANIYMGLTTSRLNQPKQGLVTVLRQVHEMGFGKLNGNVVQALTGHMLPGFVGKNVRLSNGEIGTIVMNNPLDLFKPLVKVNETFRDLSRERSLSVEEVFI
>NZ_CP009241.1|WP_038590140.1|3157930_3158671_+|GTP-pyrophosphokinase-family-protein
MNVDNNQMENLKQIKHELTRFMMIYRFALEEMETKIEILKQEFQILHDYSPIEHTKSRIKSPESIMSKMLRKNSELSLAAVKSSIKDIAGLRITCSFISDIYSVSEMLQKQDDLKVLEVKDYIKNPKPNGYQSLHLLVEVPVFLSDCTELVCVEVQIRTIAMDFWASLEHKIFYKYSQSVPEHLTRELKQAADKAADLDLQMERLHREIQEIKDAQEDDSFEELRRIILNNQQLHLPADFIKLLGN
>NZ_CP009241.1|WP_052092011.1|3158773_3159448_+|HAD-family-hydrolase
MKPYKVISLDMFQTLVNIQGRTGNVWRPILQERYSEERAAELGGLLLSHYYKAATAIRDSGVYWTSREIYSDSFKKVFQQEAMEYDYLQAVDVLFAEHRLSELYEETEHFLQRITGEYQVCIVSDTDVEMLPDFYKSYPIRLFTSEEHLSYKNDSHNRMFGEVIAHYGVEPGQIIHIGDSVSDVLGAARAGIKACWLNRNQEVWNHEVQPDYMVKNLDEFYELL
>NZ_CP009241.1|WP_038599481.1|3159536_3160061_+|putative-metal-dependent-hydrolase
MDRLRYPIGRFEAAECRTGEARNQSVQDIRELADVLSKAVEQLTLEQLNTPYRPGGWSVRQVVHHLADTNMYAYLRFKRGLTEDAPEIPSYRQDLWAEQSDYLEEPTESSLQLLKHLNGRFVLLLDAMNEADYDRTFVSLGLGTMTLDAAVQRYVWHNRHHTAQISSLVLRSGW
>NZ_CP009241.1|WP_038590143.1|3160141_3160996_-|alpha/beta-fold-hydrolase
MWIKNKLTLSLTAVFLILLALQPLLAGQADAAAVTGKPEAKQSLTFVLVHGAWVDASFWDETAAELRKMGHTVYTPEYAGHGGDKNTQVTHEQVTKSVADFIKQKDLHEIILLGHSFGGSVIQKTAEQVPDRIKRLVFFDAFVPLDGQSVADQFPAPVQELFGNLLKTSGNNTIMLPFSLFRDVFVNTATFEQAQSLYRKVIPEPAGPAFQKLDLKKFYSLQLPKSYLFLTEDAVLPQGASGWHPGQSSHLGMFRYIEGTGDHMTTVHTNPRQIADKIVQASRD
>NZ_CP009241.1|WP_038590146.1|3161174_3162767_+|diguanylate-cyclase
MPLPRGADARFKKKLSLTWLLIALVTLVFLLTTTILLIGSYESKKKSLMETTLNLNLSNAERMSKTVDSLFRSMRSSLLYSADQISKLETPQPGAIDRYLELMRNSSNYFNSIILINADGVVLNNSPASLGIVGQPIVSPPVKEALRLKNSYLSAPYTTTSTGRMLFFMSEPLYSEDKGYLGVLGGTVYLQDFNILNMIFGNNNIDDSGSYYYIVSSEGHVLFHPDKERMNEDVSANKVVQKLMKGESGQMEALNVKGQSMLAGFSAVPANGWGIVVVSPVDFIQEQLMAHMRKILTYTLIPFVILLIFVFLLAHQLAKPFVFLADLVNRIGKDNMKVPELKPHWNREADLLTQAVVMAWKDIQKQNDQLAQEAMTDLLTGLVNRRSLEISMNQWIAARMPFSLIVLDVDKFKFVNDTYGHLTGDEVLRQVAGIISASVRPGDVCCRFGGEEFVVLLPRTKAEDAYIVAERIRKTLEKSDVPLAMRVTSSQGIAHYPTHGVSLEELLGQADRALYAAKNRGRNRTIIAGE
>NZ_CP009241.1|WP_038590149.1|3162934_3163675_+|cupin-domain-containing-protein
MDYKSPNTQFTFDVNSNTTFKKDANNYINTLSIKELNTLDNTSLLDIFLSKSNVVEPHYHQNAAELVYCISGAAVVSIINPFTNELLHFPICPGQVANVPQGWWHYEVATMDCTHLLAIFNAPVPEVILGSDILSLTPANVLAHTYCLNEAKVKDALAPLQPGTFIGPPADCCEPSKMAGENIAAPNMAPHMPMHVPHAPQAHSFGYQPYANPGYYGQPYVQQYHQQPYAQAYPVYQNMVNPPENL
>NZ_CP009241.1|WP_038590152.1|3163826_3164510_+|response-regulator-transcription-factor
MRYDVLIVDDEAVLAETTCEYLNMFEVRTAYVTSAAECERFVQEHEPSLILLDINLGESSGFDLCKKLRGTLQIPILFISARSSDDDILIALNIGGDDYIHKPYTLSVLLAKVKAVLKRYGNKDQAEQLEFGQVRIDTQLSRVLVNGEEIRFKTMEYKLLCYLAQHKNRVVPKEELFAKVWEDSFTGDGTLNVHIRHLREKIEYDPNSPQYIKTVWGKGYVLEDSPR
>NZ_CP009241.1|WP_038590155.1|3164506_3165766_+|HAMP-domain-containing-histidine-kinase
MRSRGVLLTMLAVFIAGVVFSLSIIPEGIDMRLDMVMANDVLKTVEKNWERIEQGDYSGVTQQFAVLDQEGLLRYQTADGMFTGLNEAIRNRDAILDVTVQGVTAGKLIIREDYSAKLKQNKHQLATVITVSFFMMLVLGGLYVFYLQRAFISPFKKLQGFARNVARGNLEVPLNMNKNNPFGVFTESFDIMREQLASARKSEYEANRSKKELVASLSHDIKTPVASIKAVSELMLLRAMDAKDIRQLNMINAKAEQIDLMITDMFHATLEELQELKVKGTEEYSSILDDILQNADLDNRIFHDPIPECMIYADALRLQQVFDNILSNSYKYANTAVTVVTYLTSGYLQIDIMDYGKGVDPDELPLLFNKFYRGQNITGQAGAGLGLYISKYLMQGMQGEIECSNREGGFTVSLRLKLV

Crispr_ID: NZ_CP009241_12

• CRISPR_ID: NZ_CP009241_12
• CRISPR_location: 3644802-3644926
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 2 spacers

Consensus repeat of NZ_CP009241_12

Consensus_repeat	Method
TCCATGCACATCTTCATCATCATGTCCATA	PILER-CR

spacers of NZ_CP009241_12

>12.1|3644832|33|NZ_CP009241|PILER-CR
TCCATGTCCATCATGTTCATTTCAGTCATCTTC
>12.2|3644895|25|NZ_CP009241|PILER-CR
ACTGTTCATCTTGGCCATCATGTCT

CRISPR arrays and Neighbor proteins around NZ_CP009241_12

CRISPR arrays

The CRISPR arrays of NZ_CP009241_12

>merge|NZ_CP009241|12|3644802-3644926|PILER-CR
TCTTCATCATCATGTCCATATCCATGTCCATCATGTTCATTTCAGTCATCTTCTCCATGCACATCTTCATACTGTTCATCTTGGCCATCATGTCTTCCATGCACATATTCATCATCATTTCCATA

>NZ_CP009241|12|2|3644802-3644926|PILER-CR
TCTTCATCATCATGTCCATATCCATGTCCA	TCATGTTCATTTCAGTCATCTTCTCCATGCACA
TCTTCATACTGTTCATCTTGGCCATCATGT	CTTCCATGCACATATTCATCATCAT
TTCCATA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038591289.1|3642155_3642665_+|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl|CDD|376324
NZ_CP009241.1|WP_038591307.1|3647060_3648050_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP009241.1|WP_038591286.1|3641266_3642133_+|PRD-domain-containing-protein	unknown	unknown	gnl|CDD|170086
NZ_CP009241.1|WP_038591295.1|3644280_3644595_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038599651.1|3651606_3652401_+|daunorubicin-ABC-transporter-permease	unknown	unknown	gnl|CDD|226953
NZ_CP009241.1|WP_038591283.1|3638307_3641055_+|response-regulator	unknown	unknown	gnl|CDD|237951
NZ_CP009241.1|WP_038591304.1|3645942_3647064_+|hypothetical-protein	unknown	unknown	gnl|CDD|223724
NZ_CP009241.1|WP_038591310.1|3648046_3648934_+|ABC-transporter-permease-subunit	unknown	unknown	gnl|CDD|372253
NZ_CP009241.1|WP_038591275.1|3636687_3637047_+|Replication-termination-protein	unknown	unknown	gnl|CDD|376766
NZ_CP009241.1|WP_038591312.1|3649029_3649356_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224647
NZ_CP009241.1|WP_038591315.1|3649522_3650305_+|GTP-cyclohydrolase-II	unknown	unknown	gnl|CDD|238348
NZ_CP009241.1|WP_038591318.1|3650471_3651536_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213234
NZ_CP009241.1|WP_052092056.1|3653375_3654119_+|hypothetical-protein	unknown	unknown	gnl|CDD|224215
NZ_CP009241.1|WP_038591292.1|3642711_3644166_+|PTS-transporter-subunit-EIIC	unknown	unknown	gnl|CDD|273920
NZ_CP009241.1|WP_038591281.1|3637799_3638183_+|DivIVA-domain-containing-protein	unknown	unknown	gnl|CDD|377456
NZ_CP009241.1|WP_038591301.1|3645363_3645888_+|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|236602
NZ_CP009241.1|WP_038591320.1|3652408_3653194_+|ABC-transporter-permease	unknown	unknown	gnl|CDD|226218
NZ_CP009241.1|WP_038591278.1|3637049_3637613_-|conjugal-transfer-protein-TraR	unknown	unknown	gnl|CDD|274340
NZ_CP009241.1|WP_038591268.1|3632518_3635008_+|ATP-dependent-helicase-HrpB	unknown	unknown	gnl|CDD|273901
NZ_CP009241.1|WP_038591272.1|3635225_3635801_+|low-temperature-induced-protein	unknown	unknown	gnl|CDD|378584

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038591289.1|3642155_3642665_+|PTS-glucose-transporter-subunit-IIA	gnl|CDD|376324	pfam00358, PTS_EIIA_1, phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1.	6.06966e-60
NZ_CP009241.1|WP_038591307.1|3647060_3648050_+|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.29664e-83
NZ_CP009241.1|WP_038591286.1|3641266_3642133_+|PRD-domain-containing-protein	gnl|CDD|170086	PRK09772, PRK09772, transcriptional antiterminator BglG; Provisional.	7.17101e-34
NZ_CP009241.1|WP_038591281.1|3637799_3638183_+|DivIVA-domain-containing-protein	gnl|CDD|377456	pfam05103, DivIVA, DivIVA protein. The Bacillus subtilis divIVA1 mutation causes misplacement of the septum during cell division, resulting in the formation of small, circular, anucleate mini-cells. Inactivation of divIVA produces a mini-cell phenotype, whereas overproduction of DivIVA results in a filamentation phenotype. These proteins appear to contain coiled-coils.	2.29131e-11
NZ_CP009241.1|WP_038599651.1|3651606_3652401_+|daunorubicin-ABC-transporter-permease	gnl|CDD|226953	COG4587, COG4587, ABC-type uncharacterized transport system, permease component [General function prediction only].	5.07173e-35
NZ_CP009241.1|WP_038591283.1|3638307_3641055_+|response-regulator	gnl|CDD|237951	PRK15347, PRK15347, two component system sensor kinase.	1.33761e-68
NZ_CP009241.1|WP_038591304.1|3645942_3647064_+|hypothetical-protein	gnl|CDD|223724	COG0651, HyfB, Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion / Inorganic ion transport and metabolism].	0.00577344
NZ_CP009241.1|WP_038591275.1|3636687_3637047_+|Replication-termination-protein	gnl|CDD|376766	pfam02334, RTP, Replication terminator protein. The bacterial replication terminator protein (RTP) plays a role in the termination of DNA replication by impeding replication fork movement. Two RTP dimers bind to the two inverted repeat regions at the termination site.	4.70295e-55
NZ_CP009241.1|WP_038591312.1|3649029_3649356_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	3.73005e-36
NZ_CP009241.1|WP_038591315.1|3649522_3650305_+|GTP-cyclohydrolase-II	gnl|CDD|238348	cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA). GTP cyclohydrolase II catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5' phosphate, formate, pyrophosphate (APy), and GMP in the biosynthetic pathway of riboflavin. Riboflavin is the precursor molecule for the synthesis of the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD) which are essential to cell metabolism. The enzyme is present in plants and numerous pathogenic bacteria, especially gram negative organisms, who are dependent on endogenous synthesis of the vitamin because they lack an appropriate uptake system. For animals and humans, which lack this biosynthetic pathway, riboflavin is the essential vitamin B2. GTP cyclohydrolase II requires magnesium ions for activity and has a bound catalytic zinc. The functionally active form is thought to be a homodimer. A paralogous protein is encoded in the genome of Streptomyces coelicolor, which converts GTP to 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (FAPy), an activity that has otherwise been reported for unrelated GTP cyclohydrolases III.	9.51683e-86
NZ_CP009241.1|WP_038591318.1|3650471_3651536_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213234	cd03267, ABC_NatA_like, ATP-binding cassette domain of an uncharacterized transporter similar in sequence to NatA. NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the proton-motive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunorubicin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single integral membrane protein.	1.41212e-129
NZ_CP009241.1|WP_052092056.1|3653375_3654119_+|hypothetical-protein	gnl|CDD|224215	COG1296, AzlC, Predicted branched-chain amino acid permease (azaleucine resistance) [Amino acid transport and metabolism].	2.70136e-29
NZ_CP009241.1|WP_038591292.1|3642711_3644166_+|PTS-transporter-subunit-EIIC	gnl|CDD|273920	TIGR01998, N-acetylglucosamine_and_glucose_PTS, PTS system, N-acetylglucosamine-specific IIBC component. This model represents the combined B and C domains of the PTS transport system enzyme II specific for N-acetylglucosamine transport. Many of the genes in this family also include an A domain as part of the same polypeptide and thus should be given the name "PTS system, N-acetylglucosamine-specific IIABC component". This family is most closely related to the glucose-specific PTS enzymes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	2.24991e-168
NZ_CP009241.1|WP_038591310.1|3648046_3648934_+|ABC-transporter-permease-subunit	gnl|CDD|372253	pfam12679, ABC2_membrane_2, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family.	2.41318e-05
NZ_CP009241.1|WP_038591301.1|3645363_3645888_+|sigma-70-family-RNA-polymerase-sigma-factor	gnl|CDD|236602	PRK09639, PRK09639, RNA polymerase sigma factor SigX; Provisional.	9.2743e-43
NZ_CP009241.1|WP_038591320.1|3652408_3653194_+|ABC-transporter-permease	gnl|CDD|226218	COG3694, COG3694, ABC-type uncharacterized transport system, permease component [General function prediction only].	2.59474e-45
NZ_CP009241.1|WP_038591278.1|3637049_3637613_-|conjugal-transfer-protein-TraR	gnl|CDD|274340	TIGR02890, conserved_hypothetical_protein, regulatory protein, yteA family. Members of this predicted regulatory protein are found only in endospore-forming members of the Firmicutes group of bacteria, and in nearly every such species; Clostridium perfringens seems to be an exception. The member from Bacillus subtilis, the model system for the study of the sporulation program, has been designated both yteA and yzwB. Some (but not all) members of this family show a strong sequence match to Pfam family pfam01258 the C4-type zinc finger protein, DksA/TraR family, but only one of the four key Cys residues is conserved. All members of this protein family share an additional C-terminal domain. Smaller proteins from the proteobacteria with just the N-terminal domain, including DksA and DksA2 are RNA polymerase-binding regulatory proteins even if the Zn-binding site is not conserved. [Unknown function, General].	1.82657e-48
NZ_CP009241.1|WP_038591268.1|3632518_3635008_+|ATP-dependent-helicase-HrpB	gnl|CDD|273901	TIGR01970, ATP-dependent_RNA_helicase_HrpB, ATP-dependent helicase HrpB. This model represents HrpB, one of two related but uncharacterized DEAH-box ATP-dependent helicases in many Proteobacteria, but also in a few species of other lineages. The member from Rhizobium meliloti has been designated HelO. HrpB is typically about 800 residues in length, while its paralog HrpA (TIGR01967), also uncharacterized, is about 1300 amino acids long. Related characterized eukarotic proteins are RNA helicases associated with pre-mRNA processing. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP009241.1|WP_038591272.1|3635225_3635801_+|low-temperature-induced-protein	gnl|CDD|378584	pfam11181, YflT, Heat induced stress protein YflT. YflT is a heat induced protein.	7.52806e-13

Protein sequences

>NZ_CP009241.1|WP_038591295.1|3644280_3644595_+|hypothetical-protein
MSVDDYLDLLNYAKAINDGQWQADIIENLKNFKEASEERERVENVRELWNRFDHINLMLLELFNKLREHEDAEDSYRWKEKIWELKMERITLAKQIQERYIKIR
>NZ_CP009241.1|WP_038591292.1|3642711_3644166_+|PTS-transporter-subunit-EIIC
MLAFLQKLGKSLMLPVATLPAAGILQGLALINYEKDWHLGANVGGFLNQYVAPFLNAGAGAIFGNLALIFAIGVAIGFAGDAVAALSALISYLVLTKVLAIVPLQFSFINDDVVLNMGVLGGIFAGAWAAFLYKKYHNIKMPDWLGFFAGKRFVPIVTAGSMMVLAIFVGMIWSPIQDVISDFGNWVVGLGAVGAFIFGTANRLLIPIGLHHVLNTIAWFQIGDFTNAAGELVHGDLTRFFAGDKTAGMFMTGFFPIMMFALPGAAFAFIHTAKPEKRKLVASIFIGSAIASFLTGITEPLEFSFMFVAPLLYLVHAILTGLSLALMYVLDVKMGFGFSAGLIDSLLYLKLTTNAWMLIPIGLAFFVLYYVLFRFIIVKFKLKTPGREDETEDEIEEKSIGGASAGVSSQAAKILENIGGPSNIRNIDACITRLRLIVNDDKAVKDAALKQLGASGVMRLGQGAVQIVFGPKSEQIKDDIKKLM
>NZ_CP009241.1|WP_038591289.1|3642155_3642665_+|PTS-glucose-transporter-subunit-IIA
MFSKWKSKKEEQHTEQIIEITAPISGQAVPLNQVPDDTFAGGHMGSGIAIEPAEGRLKAPFDGKIAHIVKSNHALILEHPSGLQLLLHIGIDTVSLKGNGFVSHVATGDSVKAGQTLIEFDLEAIQAAGLATISPVIVTSMEEHLPEIESLYGAVTAGTNIVLRVASKH
>NZ_CP009241.1|WP_038591286.1|3641266_3642133_+|PRD-domain-containing-protein
MSREIEQFQVQRVIGNNVVMVQGEKNGKEYVIIGKGIGFAVKDAGVIESNDHRIEKLFRLEDREEWSQYQILLEDIDPKIMKITDEIIGDITCQFPGKLNDKIYLALPSHIQFTIYRLRGGMDIINPFLQETKMTFPKEFEIAFKAAEKISDEFKIQIPEDEVGFLTYHVYSAVSNVPVGQLVKASNIVNELIEMIREERKITFEHGSMNHVRLMIHLRFSLERILQGSLIDNPFVKHIKKEYKAEYKLAQKLGKVMQSSLEVEVPDEELCFLAMHLHRLFQTLEKNK
>NZ_CP009241.1|WP_038591283.1|3638307_3641055_+|response-regulator
MPKKQTWSLKIRGKIAVGYVLIFLMLGLFLLIVSSRITDLEKETVFLSDHDIEVHELTYQIEKNVLDMETGQRGYALTGDNSYLVPFNSGLAAWQINLAKLNGLIADNPDQMRNLGVIKENIQLWIDLAGQPVVDLKRNGEDQAIAKFFRNDTGKSVIDSIRSQSDYFRDNERKLTNERISNLKESNSRLLITMYILWTLVVLLAVLITYLISASIVNPLQHVILAINGIAGGGNMSERIKVKTMDEIYDLGEATNSLLDKVQLEQWSSEQQTAMSVILQEATDIYLLCRTFMNKLATTLEMQYGAIYVMDHKERYKCMYSYAGAEKTEFPFAEDSILPGVGLVGQCAVDKRIIIVEDLPENYISINSALGRTAPRFAVIAPIIFENKTVAVLEVASLTQWASYHHELLSKLLDMMAVSVNSVMTRMEIQKLYHNSQVMNEELQVQSEELQVQSEELQVQTEELQNQTNELLTVNRELENQKAVAENAAVELERYNEQLELSSRYKSEFLANMSHELRTPLNSMLILSQLLAENRNNNLSEEEQGYASVIHNSGTDLLVMINDILDLSKVEAGKMMVEMDAVNLTELPTLLRGYFGKTAEQQKLEFSVNIGAEVPDLFYTDEMRLHQILRNLLSNAFKFTEVGSVQVDITRIEAYSDPQYNPTEPVLAFSVKDTGIGISEEHRELIFEAFMQADGSTVRKFGGTGLGLSISLQLARLLGGYISLQSELGQGSTFTLFLPCRCLEADMEDGLQPPGSWSTVAAAREREVTQKPEKATITVDTSLFEKQYDMLQGRTVLIVDDDLRNIYALKQGLEPYQMNILTAQSGFECLQIVREQANVDIVLLDIMMPNLDGYDTLSIIREELLLPDLPIIAISAKTMKEDREKCLAAGATDFISKPVVMKDVITRMCRWITVE
>NZ_CP009241.1|WP_038591281.1|3637799_3638183_+|DivIVA-domain-containing-protein
MDEHMKRRLDKQRKLFSQLGITLDALTIHEKEFGMKLRGYDAEEVDTFLDSVIKDYERFYATIADLMDKWQEQQIELREMKAETKAIPVAPPIVRGIDPRELEDVIIKLENNIRQLKDRLPQSEGYL
>NZ_CP009241.1|WP_038591278.1|3637049_3637613_-|conjugal-transfer-protein-TraR
MSHLSNSQLATLKAALEERKEELEQHFSSNGEENSLLGDSLKISTGELSSVDNHPADTGTETFERSRDLGINKALTEELEEIEAALQRMKDGTYGVCIASKQNIPYERLEAIPYTAYTVEYSPGRELSSDRPVEEQVMTPPPAGAGEGRQEHSGRFDDAGAWDSVEDYGSASSPVTPPGQDVEKEDS
>NZ_CP009241.1|WP_038591275.1|3636687_3637047_+|Replication-termination-protein
MAFMIAQRAFIKVYLITMVEQHKGYGYQMLEDLRRDFKAHSYAPPQSEIYRALHELVQQGILYRTKQLKGNDPKVDFQEIVLYHFTADGEEKARLYKKQVKTDLDRCLGILNKAVADNF
>NZ_CP009241.1|WP_038591272.1|3635225_3635801_+|low-temperature-induced-protein
MTNKIVGVFDTEQEATRAIEGLQSRGVSNDEISVITRDRDELKSISDDTGTMAPEGVATGAATGGVVGGITGLLAGIGALAIPGIGPILAAGPIVATLTGAAIGAGAGGLVGGLIGLGIPEDEAKEYEGYVDSGKILVLVDDNGRGRDIHDVFSGSQSLNSGRYNNLYSDTTVDDTLINRETTDTYNRNRL
>NZ_CP009241.1|WP_038591268.1|3632518_3635008_+|ATP-dependent-helicase-HrpB
MKQLPIMQVLPDLKLILNKNKAAVLIAEPGAGKTTGTPPAFLDEPWMSGKSILMLEPRRLAARSAAVYMAACLGESVGQTVGYRMRMDSKVGKNTRIVVVTEGVLTRMLQSDPSLGDVGLIIFDEFHERSLHADLGLALTLEVQSVLREDLRILIMSATLDGERVSALLGGAPVVDCPGRTYPVETIYVPGSGTAQLEQAAAIAVRRALDEQSGDVLVFLPGEREIRRTERELQSGALPQGTVLRPLYGQLPQAMQDAAVAPAVPGERKVVLATSIAETSLTIEGVRTVIDTGQRRTQVFSPRTGMPRLTTVPVSKASADQRRGRAGRTAPGVCYRLWSSEEHQRLPDDNVPEIMETDLAQLALELALWGVRDPAALPWLDAPPAAPYAQGAALLRQLGALDAGGAITPHGRSMAALGAHPRAAHMLLRAAELGAAPLACRLAALLQERDLFKGPAAADSDLTLRVEALLRFERSAETGGADPAILRAVQRESRNLLAQLQAAPEVPRDSSGTGLLLSFAYPDRVGQKRGDGAFLLAGGRGAAMREGQPLSRSPYIVAAGVDDRAGQGRIMLAADLPEEELLRHHAGSFTEEREVYWDKESGSVKARRRTLLGALVLKETSHERPTAEETEDVLLGVISAEGLEILPWDKGTVQLRQRMAFMHGLRTDWPDVADEALLGSLDEWLRPFIQGMRNLRDLQRLPLSRALEGMLDWNSRQKLDKEAPTHISVPSGSRIPLDYSNPGAPVLAVRLQEMFGQVDTPRIGMGQVPLLLHLLSPARRPMQVTSDLASFWRSTYFEVKKDLKGRYPKHYWPDDPLQAAPTNRTRPVK
>NZ_CP009241.1|WP_038591301.1|3645363_3645888_+|sigma-70-family-RNA-polymerase-sigma-factor
MDIPESDIFKALFYEHYPVVRRKLAALVRDETAADDLAQDVFLRLYRNPPDDPGALGAWLHRVLTRVGYDYLNKVARERRLQNKQELLFDIGASPPTGEEVVLAKLDQEDVRTWLDSLPDRDRQALLLRYSGYSYAEIAGELGVKPPVVGTLLSRATTKLRQHAVEALPHTTRP
>NZ_CP009241.1|WP_038591304.1|3645942_3647064_+|hypothetical-protein
MTNPIKHESDQLNMDEAWARLQDSIAQEPVNPVWAAWGQQSTTNNDPLINAASTAGTPGGRTAMTQITGQADSATEGKKTGKRPRRPQMNRRRKWAATAASVAIFAAILATPVGSTAMAAILNQFRMQEPTVVNESDLRNIFNQITEGGTVGEAASKFGAVSSSSGTIDGAVPINDLQKTLGYSAVSGEGFDQVKSAWISPSQEMTLMLNVDAVNEALLRLGSDQLLPESIDGKPITLAIPEIVRYDLSTDNQHWASFTQMNTPIVTVDPSIDVEEAVKAVLNFPLLPDHLKSSLQQSRILSGDIPLPLIKGQFSEEITIDGTPVIFNKNEYGRGTQYSATWVKNGQLFDFSGGEVYSDKAKFMTKLQELITS
>NZ_CP009241.1|WP_038591307.1|3647060_3648050_+|ABC-transporter-ATP-binding-protein
MSIPAIEANSLTKEYSNGRGCRDVTITVGKGEAFGFLGPNGAGKSTFVKMLVGLIHPTGGSASLLGHKIGTMEAKMKIGYLPELYRYQEWLTGEEVVRLHARLCRIDKTVAGQRIPQLLNEVGIGQRGRDRVKHYSKGMQQRLGLACALVNEPEIVFLDEPSSALDPIGRMEVRGILQRLKERGITIFLNSHLLEDVEVLCDRMALLNNGLILRHGTVSEILNKRTSWHFKVGGFSPFLLSWLNDFTGLSINISSGEDKQERDSLQGTDPDSGIVWLEAELESEEQVGWLNAVFIEQGLTLYEVKRKKERLEEWFMDAVSGLSHRGERE
>NZ_CP009241.1|WP_038591310.1|3648046_3648934_+|ABC-transporter-permease-subunit
MRIILGMTWKEMLRKRVMMLTLVMTVIFLLAFWFVAGTIGGDRRFGGGSGIVNGSILIERFTNGAFILTLGFFFGSFVIAFLAIFSSFSAIAGEAEQGVMQAMLPRPIPRWKWYLGRWLGYVTLGLLYALILFAAILFITNAHAAIPRDMAALVKAFLIFASSVPLLITLSMLGSGFFSALGNGVFMTMLYGAGWLGGMIDKVSSALSLEGNALHMLNNMTGFMSMLMPVDGLQRKMTAVLFSLDDLGGMVSFSGGAFSLLNLNSVPSNSFVVYAAVYTAALFIIGLLRFQRKDL
>NZ_CP009241.1|WP_038591312.1|3649029_3649356_-|helix-turn-helix-transcriptional-regulator
MNDFEMCPRFEKAVDVLSKRWVALIVFVLMNGPRRFGEIESCLSNLSGKVLSDRLKEMENEGIITRTVYPEMPVRIEYSLTDKGTALAPILGEISNWSTEWIEIGATK
>NZ_CP009241.1|WP_038591315.1|3649522_3650305_+|GTP-cyclohydrolase-II
MIKPDILSILQNKIKRITMDDSTNILVGPITLPVNLDGETVTFKWYSWLKSDDVELQGGDSIEATELLISRLSSMNLADSQQSSVLVYGDFEDSDEALIRMHSICHTGDIFGSKRCDCGFQLHQSMKMIAQHGSGALFYLANHEGRGIGLFSKAMAYILQEEGYDTVEANLELGFADDSRDYKDAISVLQHLRSKPVTLITNNPKKMDALKAAGMNTVKRIPLWGDVSVFNEKYLRTKVTRSGHLEAVKSNDFFEGRVAK
>NZ_CP009241.1|WP_038591318.1|3650471_3651536_+|ABC-transporter-ATP-binding-protein
MNAIQVQDLRKTFKVQKNREGLKGAFADLFKREYSEVTAVKDISFTIPQGEICGYIGENGAGKSTTIKMLTGILVPTAGSLTVGGFVPYAEREKFVQNIGVVFGQRSQLWWDIGVIESFQLLRKVYRVSEQDFKKRLDELVLRLELQDLLNRPVRKLSLGQRMRCELVAALLHNPSILFLDEPTIGLDIVVKSEIREFLKDMNREHGTTILLTTHDLQDIEALCSRVIMLDDGRIIYDGGLEDLKQRWGTGREVVFQFGTATKLSQIMQWTEGMPVTWTAENDLAAKVWIPLELNVSDVLGRVVGLADITDIKIIETNTDDIVRSIYQSGSAEKPEEMIAALQEEKEVIHVGQA
>NZ_CP009241.1|WP_038599651.1|3651606_3652401_+|daunorubicin-ABC-transporter-permease
MLGAYFDFIRIRFLTMLAYRVNYYSGILIYTLNIGVNYFTWKAIYGNGESLGGFTGAQMTTYVAVSWMARAFYFNNLDREISTDIRDGSIAIQFIRPYNYVLVKMMQGLGEGLFRFMMLMIPGMVIAILLFPVQLPTELSAWAGFLVMLFFSFLISSQINVITGLSAFFVENNEGMMRMKRVIVDLFSGLIIPISLFPDWLSGVLKVLPFQAITYLPGSVFTGRVQGVGIWNVLGVQVFWFLVLLIPIVWLYHAARQRLFVQGG
>NZ_CP009241.1|WP_038591320.1|3652408_3653194_+|ABC-transporter-permease
MYYLGLLIEYLKNYMKTRLTYRADFWVEVISDLLFQATNFIFILVIFMHTDSLGGWNQNEVVFVYGFFMVPYGVFSCFVNMWGFSERYIVKGEMDRILTRPAHNLFQIFLENVDPPALFGSIIGLIIMAISGANLGLPFEWWTIPALILLTLSAVAIYTGIYTTLTSLSFYSDAPTGILPLMYNIQSYGRYPVTIYNRAIQVLLTWVIPFAFVGIYPAALFLERDEMRGMALLTPVVGAVFLCLGLVSWNYGVKRYKGAGS
>NZ_CP009241.1|WP_052092056.1|3653375_3654119_+|hypothetical-protein
MGVFGAEFKKGCLDSLPIVAGFIPACFTFGLVGKGLGLGSLEVFLMSALMYAGTSQFAGVKLLAAGTAAPLILLLTLVINLRYLMISLSFSGLVRRNLSTAVKAWIGFSLTEEVYAVSMLSHKQILGQEAADGQSPELPLHYLLGLQIPPYTANLVSTAAGISLAAYIPAAFLPALNTSLYALLIALIVPQLRGSRRNLVICLCSALFSWVLQPYLGSSAVLAAMLAGMTAGLLVPVRVNRAVEETA

Crispr_ID: NZ_CP009241_13

• CRISPR_ID: NZ_CP009241_13
• CRISPR_location: 4429466-4429549
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_13

Consensus_repeat	Method
CAATGATGAGAATGCTCACAAACAT	CRISPRCasFinder

spacers of NZ_CP009241_13

>13.1|4429491|34|NZ_CP009241|CRISPRCasFinder
AAGCTTATGCTTTCGATGTTTGTTCGAAGTGTTG

CRISPR arrays and Neighbor proteins around NZ_CP009241_13

CRISPR arrays

The CRISPR arrays of NZ_CP009241_13

>merge|NZ_CP009241|13|4429466-4429549|CRISPRCasFinder
CAATGATGAGAATGCTCACAAACATAAGCTTATGCTTTCGATGTTTGTTCGAAGTGTTGCAATGATGTGAATGCTCACAAACAT

>NZ_CP009241|13|11|4429466-4429549|CRISPRCasFinder
CAATGATGAGAATGCTCACAAACAT	AAGCTTATGCTTTCGATGTTTGTTCGAAGTGTTG
CAATGATGTGAATGCTCACAAACAT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038592827.1|4418975_4419680_-|dihydroorotate-dehydrogenase-electron-transfer-subunit	unknown	unknown	gnl|CDD|99814
NZ_CP009241.1|WP_038592836.1|4423118_4425233_+|polyphosphate-kinase-1	unknown	unknown	gnl|CDD|235469
NZ_CP009241.1|WP_038592871.1|4442126_4443050_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|378968
NZ_CP009241.1|WP_038592830.1|4420996_4421884_+|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|213022
NZ_CP009241.1|WP_038592824.1|4418050_4418983_-|dihydroorotate-dehydrogenase	unknown	unknown	gnl|CDD|235982
NZ_CP009241.1|WP_038592842.1|4426827_4427550_-|amino-acid-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224051
NZ_CP009241.1|WP_038592848.1|4428332_4429154_-|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|270338
NZ_CP009241.1|WP_038592839.1|4425180_4426710_-|Ppx/GppA-family-phosphatase	unknown	unknown	gnl|CDD|223326
NZ_CP009241.1|WP_038592854.1|4431466_4432891_-|glycogen-synthase-GlgA	unknown	unknown	gnl|CDD|234809
NZ_CP009241.1|WP_038592845.1|4427536_4428196_-|amino-acid-ABC-transporter-permease	unknown	unknown	gnl|CDD|223836
NZ_CP009241.1|WP_038592863.1|4436420_4437857_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP009241.1|WP_038592860.1|4435068_4436298_+|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|179997
NZ_CP009241.1|WP_156130894.1|4440680_4441859_-|MFS-transporter	unknown	unknown	gnl|CDD|341030
NZ_CP009241.1|WP_038592851.1|4429565_4431311_+|alpha-glycosidase	unknown	unknown	gnl|CDD|200477
NZ_CP009241.1|WP_038592865.1|4437853_4438552_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP009241.1|WP_156130893.1|4438544_4439828_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038592869.1|4439863_4440589_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|226164
NZ_CP009241.1|WP_038592833.1|4422070_4422733_-|LysM-peptidoglycan-binding-domain-containing-protein	unknown	unknown	gnl|CDD|270620
NZ_CP009241.1|WP_038599973.1|4419766_4420807_-|NADH:flavin-oxidoreductase/NADH-oxidase	unknown	unknown	gnl|CDD|239242
NZ_CP009241.1|WP_038592857.1|4432926_4434852_-|1,4-alpha-glucan-branching-protein-GlgB	unknown	unknown	gnl|CDD|235445

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038592827.1|4418975_4419680_-|dihydroorotate-dehydrogenase-electron-transfer-subunit	gnl|CDD|99814	cd06218, DHOD_e_trans, FAD/NAD binding domain in the electron transfer subunit of dihydroorotate dehydrogenase. Dihydroorotate dehydrogenases (DHODs) catalyze the only redox reaction in pyrimidine de novo biosynthesis. They catalyze the oxidation of (S)-dihydroorotate to orotate coupled with the reduction of NAD+. In L. lactis, DHOD B (encoded by pyrDa) is co-expressed with pyrK and both gene products are required for full activity, as well as 3 cofactors: FMN, FAD, and an [2Fe-2S] cluster.	2.43114e-79
NZ_CP009241.1|WP_038592836.1|4423118_4425233_+|polyphosphate-kinase-1	gnl|CDD|235469	PRK05443, PRK05443, polyphosphate kinase; Provisional.	0
NZ_CP009241.1|WP_038592871.1|4442126_4443050_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|378968	pfam12840, HTH_20, Helix-turn-helix domain. This domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins.	2.06326e-05
NZ_CP009241.1|WP_038592830.1|4420996_4421884_+|polysaccharide-deacetylase-family-protein	gnl|CDD|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	4.82037e-81
NZ_CP009241.1|WP_038592824.1|4418050_4418983_-|dihydroorotate-dehydrogenase	gnl|CDD|235982	PRK07259, PRK07259, dihydroorotate dehydrogenase.	7.09556e-151
NZ_CP009241.1|WP_038592842.1|4426827_4427550_-|amino-acid-ABC-transporter-ATP-binding-protein	gnl|CDD|224051	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism].	2.17423e-163
NZ_CP009241.1|WP_038592848.1|4428332_4429154_-|transporter-substrate-binding-domain-containing-protein	gnl|CDD|270338	cd13620, PBP2_GltS, Substrate binding domain of glutamate or arginine ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily. This family comprises of the periplasmic-binding protein component (GltS) of an ABC transporter specific for glutamate or arginine from Lactococcus lactis, as well as its closely related proteins. The GltS domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.74745e-81
NZ_CP009241.1|WP_038592839.1|4425180_4426710_-|Ppx/GppA-family-phosphatase	gnl|CDD|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	3.67119e-97
NZ_CP009241.1|WP_038592854.1|4431466_4432891_-|glycogen-synthase-GlgA	gnl|CDD|234809	PRK00654, glgA, glycogen synthase GlgA.	0
NZ_CP009241.1|WP_038592845.1|4427536_4428196_-|amino-acid-ABC-transporter-permease	gnl|CDD|223836	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism].	1.40705e-80
NZ_CP009241.1|WP_038592863.1|4436420_4437857_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.16479e-61
NZ_CP009241.1|WP_038592860.1|4435068_4436298_+|glucose-1-phosphate-adenylyltransferase	gnl|CDD|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP009241.1|WP_156130894.1|4440680_4441859_-|MFS-transporter	gnl|CDD|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.18355e-71
NZ_CP009241.1|WP_038592851.1|4429565_4431311_+|alpha-glycosidase	gnl|CDD|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP009241.1|WP_038592865.1|4437853_4438552_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.04648e-82
NZ_CP009241.1|WP_038592869.1|4439863_4440589_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.35537e-69
NZ_CP009241.1|WP_038592833.1|4422070_4422733_-|LysM-peptidoglycan-binding-domain-containing-protein	gnl|CDD|270620	cd14667, 3D_containing_proteins, Non-mltA associated 3D domain containing proteins, named for 3 conserved aspartate residues. This family contains the 3D domain, named for its 3 conserved aspartates, including similar uncharacterized proteins. These proteins contain the critical active site aspartate of mltA-like lytic transglycosylases where the 3D domain forms a larger domain with the N-terminal region. This domain is also found in conjunction with numerous other domains such as the Escherichia coli MltA, a membrane-bound lytic transglycosylase comprised of 2 domains separated by a large groove, where the peptidoglycan strand binds. Domain A is made up of an N-terminal and a C-terminal portion, corresponding to the 3D domain and Domain B is inserted within the linear sequence of domain A. MltA is distinct from other bacterial LTs, which are similar to each other. Escherichia coli peptidoglycan lytic transglycosylase (LT) initiates cell wall recycling in response to damage, during bacterial fission, and cleaves peptidoglycan (PG) to create functional spaces in its wall. PG chains (also known as murein), the major components of the bacterial cell wall, are comprised of alternating beta-1-4-linked N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), and lytic transglycosylases cleave this beta-1-4 bond.	4.45176e-26
NZ_CP009241.1|WP_038599973.1|4419766_4420807_-|NADH:flavin-oxidoreductase/NADH-oxidase	gnl|CDD|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	2.47239e-161
NZ_CP009241.1|WP_038592857.1|4432926_4434852_-|1,4-alpha-glucan-branching-protein-GlgB	gnl|CDD|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0

Protein sequences

>NZ_CP009241.1|WP_038592848.1|4428332_4429154_-|transporter-substrate-binding-domain-containing-protein
MKKWGKLSLGMLLAVGLMTGCGTNNNEDNKNAASNGNAGSETAAKTLTLGTSAEFPPYEFHKMIDGKDTIVGFDIEIAKDIAADMGAELVIRDLPFDSLLNELSSGRVDIVISGLSYTPKRAEAVGLSDVYFKAEQAVVVREADKAKFATMDALKNTKIGIQTGSIQEDIAKEIEGAKLTSLTKMTEIVMQLQSNRVDASIMEGPVAESFVKNVKGLVITDAKPVVEDDGYVIGVKKGNTELLDQVNTTLKRLTADGKIEEYVSAASDLSISK
>NZ_CP009241.1|WP_038592845.1|4427536_4428196_-|amino-acid-ABC-transporter-permease
MNLFDMAYEYRNLFFSGLKYTLLLALIGVLCGFVLGIIVSLLRMSKWSVLRFIATAWVEFLRGTPMLVQLFLIHYGLVELGLEFSAIQSGAITLTINSSAYLAEIFRAGIQGVDRGQMEAARSLGMKQGMTMRYIVLPQALKNVLPAIGNEFITIIKESSIVSMIGVADLLFQARNITAITYEGLTPLIIISIMYFILTFTLSKLLGILERRLNTDDRR
>NZ_CP009241.1|WP_038592842.1|4426827_4427550_-|amino-acid-ABC-transporter-ATP-binding-protein
MIAVNNLQKHFGKLEILKGIDLEIQKGEVVVVIGPSGSGKSTFLRCLNLLEQPTGGEITFEGESITAKKHDINVTREKMGMVFQQFNLFPHKSVLQNIMLAPLKVKKQQPAEAEKIAMELLRTVGLEDKRDAYPAQLSGGQKQRIAIARALAMQPHVMLFDEPTSALDPEMVGEVLEVMKKLAEDGMTMVIVTHEMGFAREVGDRILFMDGGYIVEQGTPAEVFGHPKHDRTRDFLSKVL
>NZ_CP009241.1|WP_038592839.1|4425180_4426710_-|Ppx/GppA-family-phosphatase
MSDDLCRIGIIDIGSNSIRLVIYDTTRQGGYKIIKECKYSARLSEKITKEGRLERKDMDTIIPVLRQFKEICSAFEVDRIRAGATAAIRNAANSSEIITYLSEASLIPIEVISGYQEAYFGFLGVINAFDVQDGFVIDIGGGSTEVTLFRGRRYQHSISFPFGAVNTNLMFSHQGNWNSEQVKKLQAYVTGRLVEHEWLGTSAGLPLYGLGGTLRSLGKLDQKMREYSLPNSHGYVLSSETIDRFMEILPDTPYEKRKDMEGLSKSRADIIVSGLVIFHTVYNYIRASQALISGEGLREGMLHDLLNPEQPVCDSALEFSLDTIIRFDIRTSKGHLEHICKLAMSLFGALGHEGDHEEQKMLIYVSIMLHRTGSNINYYQSKRHTRYWLMNSPIRGLTHRQLILSALIASYSTKSRKQKLSQTHKDILLASDEEWIHKLGTLVQLSIALDSTEIGVIRGLNAELHGNTLHLELEGVGEVHIGQEDIENALKAFKNAWSVKVKLGSLSND
>NZ_CP009241.1|WP_038592836.1|4423118_4425233_+|polyphosphate-kinase-1
MNAEEKKNNHSSPATAYLNRDLSWIEFNRRVLLEAQDLDNPLMERAKFLAIVSSNLDEFISVRVAGIQDQIRAGYTKKDFTGYTPSGLYKRLIKRVTKIIADQYRTFRDISRHLHKEGIVFVNYEDLTHAQELSIEQYYRDIIFPVLTPMAVDQSRPFPLVHSQFIYLAVVLTRKNSQEEDPYFAILQIPSNLPRCIPLPHRSNSKKRQFVFIEDVIRHHIQTLFSGYEPVAVSEFRLTRNSDLTIDEEGAEDLLEEIEKELRKRRRGVPARLEVQKGIHPYALEQLQAEFELEDFVFEIDGPLDLGFLRGFAGSLKGFSYLFDAPIVPQYPAEFEENEDFFEVLSERDVLVYHPYESFDAMSDFIIQASEDEHVMAIKMTLYRVSGNSPLITALANAAESGKQVTVVVELKARFDEERNIAWARKLEQSGCHVVYGLVGLKTHAKVTLIVRQEGNELRRYVHVGTGNYNDSTAKAYTDLSLFTANNEIGLDASELFNQMTGYSANYDWNAFIVAPTNMSLSLQKLILREAEHAAAGRPARIIAKMNSLSNQEVIDSLYSAAQAGVSIDLIVRGVCCLRPGIEGLSERITVRSIVDRFLEHSRIYYFENGGKPEVYLSSADWMTRNLTRRIELMCPVLDSGIRKQIVKILDLSLKDNVKASFLQPNGYYERPDDKKAPFRSQLAALEVSHWKGSRALPSPTKHS
>NZ_CP009241.1|WP_038592833.1|4422070_4422733_-|LysM-peptidoglycan-binding-domain-containing-protein
MKIRFRAITALAAAVGISTLLHAVPAKADSVHIAGETTTYYTLSNYYGIGVDELMNANKSVASVNIYPGLKLTIPRENKLIAAADTSSPASVISTSLNVEKESNTVQAWGKEFNYAKIIQAKATAYSSAASENGKWGAVDYFGDALKLGTIAVDPNVIPLGTKVLVTGHSHPGLPKQAFLATATDMGSAIKGNRIDIFIPGSQSFVSDFGFQYVNLYIIE
>NZ_CP009241.1|WP_038592830.1|4420996_4421884_+|polysaccharide-deacetylase-family-protein
MDKLLKGRKLLILLAITMVLLSPVTSAELVSASPPLLQQPEENGTPQPQNAAEDEVEAIAPGSSSSAAAARRQKRSKTLTLSQLMRKYPETIKTQGPRNRMIALTFDDVPDPRFTPQLLDVLRKYHVKATFFVVGSRAEKHPALVQRMIREGHVVGNHSYNHPEFGKLSVNEFRTQIVRTENIIAALAGYKPRLIRPPYGDVSEQQLKWAKSHGYKLINWNVDSLDWRGLSKSQVRNNILSHAGKGAIVLQHGGGGQGSNLRGTIQALPEVINILRKRGYTFVTVPQMLQIDKNK
>NZ_CP009241.1|WP_038599973.1|4419766_4420807_-|NADH:flavin-oxidoreductase/NADH-oxidase
MTDLFKPYELKALVLKNRIVMPPMCQYAVHKQDGIPDDWHFVHYVSRAVGGTGFIIVEMSGVHPDGRITNHDTGIWSDDQIAAYRKITDGVHAYGAKIAIQLGHAGRKALDAEPPVAPSAIPFDEKSKIPQALSKEEIAELVLAYREGARRAVEAGFDTVEIHGAHGYLIHQFHSPLTNVREDEYGADLALFGEQVVQAVREVLPAEMPLLMRVSAREYVEGGYDEAYALDICRRYKDAGVDIFHVSSGGEGPVGSNGGPNAGPAYQVDLAEYIRSGLQVPVIAVGRLENYAEAQSVVAEEKAELVAIGRAMLSDPYWALHAEEALGGVDKANVPKPYERGVWHRK
>NZ_CP009241.1|WP_038592827.1|4418975_4419680_-|dihydroorotate-dehydrogenase-electron-transfer-subunit
MATVITNERLADGVYHLRVEGNYGGEMGQFYMLRAWGAYPLLSRPLSIHQVNDDGVEFLYHVVGEGTEIFAGLTPGDNIDLEGPFGNGFPEVEGKVALVGGGIGIAPLYYCAQKLPGSDIYLGFSREAFRTEAFRPLAAELTVNVGGLILDSVDFTSYDHIFVCGPHPMLKAAQLKGFAAETAGKKPGVYLSLENRMACGIGACLVCSVSCRDGQRKACADGPVFLAEEVLFHD
>NZ_CP009241.1|WP_038592824.1|4418050_4418983_-|dihydroorotate-dehydrogenase
MINLTANIAGVHFKNPIVMASGTFGFGREYGKLYDVSMLGGISGKGLTLNAKAGNPGVRVYETASGMLNSVGLENPGVEGFLAKELPYWETLDTARIVNLGGNTLHDYVLGAELIQRDAEARSLAGTTAVDMIELNISCPNVKEGGIAFGVKTPAAQEVVRAVRAATKLPLAVKLSPNAEDIAEMAEMCQEEGADAVSLINTISGMKIDVRRRRSVFNNLYAGLSGPAIKPVALRMVHQVAKRVSIPVIGMGGITSATDIIEFIMAGATVIQVGTYNFMNLRAGSTLVEELQQFMLAENISSLDEIRGIV
>NZ_CP009241.1|WP_038592851.1|4429565_4431311_+|alpha-glycosidase
MLLEAMYHVPRDKWAYAYDTKTIHLRVRTKRDDVDCVAALTGDKYDWDHTFYEIMMEKAASDDRFDYWEAAVRPKYKRLSYTFRVSKGQENVYLLDNGIRSECPQPPNHFYEFPYIHQIDLFKVPNWAKDAVFYQIMTERFANGDPTNDPEGTEAWGGTPKLDNFFGGDLQGVLDHLDDLHELGINAVYFTPLFLSPSNHKYDIVDYKKVDPHFGDNELLKHVVEECHRRGIRVMLDAVFNHCSDKFPPFQDVLEKGEYSVYKDWFHINSFPAVVADGIPTYDTFGFFGNMPKFNTANYEVRAYLLEVAEYWIKEIKVDGWRLDVANEVDHHFWRDFRKVVKSANPEAYIVGEVWSDSLTWLLGDQFDSVMNYPFSGTVLEFFNGGMDGITFGQRIGALLMRYPQQTNEVVFNLLGSHDTPRLLTVVGEDKRRLKLAVVFLFTFMGTPCIYYGDEIGLTGSEDPDCRKCMEWDEKKQDRELYDFYRMMIFLRKGHKALREGRFRILVACENDPCIVYERADEIIHFTVWMNNSAEPRTLRHPMETDDWQDALTGEPVAPKEGIMHISLDPYGYRILCRNLS
>NZ_CP009241.1|WP_038592854.1|4431466_4432891_-|glycogen-synthase-GlgA
MKVLFAAAEAHPFVKTGGLADVIGALPKALKGAGVDVRVILPKYRGIPEKFTSQMEHVAVVDVPVGWRNQYCGIEQIIYDGIPVYFIDNEYYFGRDGIYGYLDDGERFAFYNRAVLECLPAINFQPDVLHCHDWHAAVIPMLLQGHYRHDPFYSEMRTVFTIHNLLYQGVFPYSVLGELLGLDDSYFSGVEYYGNVNYMKGGIVHSDHVTTVSPTYAEEIRTAYYGYGLDGLLSSRADSLSGIVNGIDTKSYNPNSDPQIFTRYRSNLAKKAENKLGLQQELGLPVAPYIPMVAMVTRLVDSKGLDLLTRVLDELLYYDDIQFVLLGTGDESYERWFREAAWRYPTKLSSQILFNDALSRKIYAASDLFLMPSKFEPCGISQLLALRYGSIPVVRETGGLNDTVHAYNEETGEGNGFTFKDYNAHDMMHTLRRAVSFYRKPEDWKKVTKNAFAGDYSWNVSAQQYIDIYNKIIQ
>NZ_CP009241.1|WP_038592857.1|4432926_4434852_-|1,4-alpha-glucan-branching-protein-GlgB
MPDIQEAENLPSFEDIYLFHEGTNYRSYTMLGAHIAAEEGMTGVRFTVWAPHATYVGLAGNHNGWDGTQDVDSLYKIPDSGFWSRFFPGIEPGTFYKYRIVAANGDSFLKADPYAFKAEVRPATASVVADLNGYSWGDAAWRRRTKAPYNGPMNIYEMHFGTWRQKEDGEFYTYREMSDLLIPYLLEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPHELMYLIDQLHQAGIGVILDWVPAHFAKDAHGLRMFDGSTLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFWFEQYHIDGMRVDAVTSMLRLDFEKQGHQFRRNQNGGLENLEAIRFIQQLNKAIFQYYPKALMMAEESSAWPGVTSPAHQGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICYAYAENYTLPLSHDEVVHGKKSLLDKMPGSYEQKFAGLRLLLGYQITHPGKKLLFMGGEFGQFIEWKDQEQLDWLLLDYESHRGMLAYTAALNKLYLAEKALWELDHDMEGYQWIDADDNGQSIVSYIRRGKRPVDTLLVIINFQPVERRQYRIGVPRPGTYEEIFSSEGIQFGGSGASNEPMKSSKKEWHNQLNSIELTIPALGFLVLKKSGRKVVKQA
>NZ_CP009241.1|WP_038592860.1|4435068_4436298_+|glucose-1-phosphate-adenylyltransferase
MSKKECIAMLLAGGEGRRLAPLTSTMAKPAVPFGGQYRIIDFPLSNCVNSNIDTVGVLTQYEANSLHQHIGEGEPWGLHSTTNQGVRLLPSGVEGRESYSGTADAIYKNIEFIDNQNPEHVLILSADHIYHMDYRKMLDYHIGKSAKATISVMEVPWDEASRFGVMNVNEELQISEFAEKPKVPKSNLASMGIYLFEWKYLKEHLLRDAANQASSHDFGKDVIPTMLEANDELFAFRFEGYWRDVGTVGSLWEAHMDLLQADNGFKLDNSKWPMYSRARRTKPAAVKPRMQLQIKTADCLVNETCLLEGSLQRSVVFGGVEIGKMTMIKQSVIMPGARIGRGVVIENAIIGEGAVIKDGAVIKGSVDNIVVVGPNEIVAAKPVIRTQPSRLLQEVYEKTGRLRAEGLPS
>NZ_CP009241.1|WP_038592863.1|4436420_4437857_-|HAMP-domain-containing-histidine-kinase
MIKKGMRRQIVLHYILVVFVALLLVEVIFLLAIRTYYYDSVYNKITTQIGISENFYKFTFSNEGSPVHFQKLLEYFDMDNTELEILTLNGDILTGSTPFQPDRTITTSDVSEAVGGSIGRWVGRQAGTNESVMAVSKMLHINGRDSFIVRYLTSMERINSDLLNLTLVSIGIGGAVMAIVMLFSFGLANSIVKPLNNITAVSAQMAKGRFTTRIKGDYKYEIGDLATTLNYMADEIIRSNQIKDDFISSISHELRTPLTSIKGWSETLISGGYDPEETKLGMGIISKESDRLIGLVEEILDFSKLQQNEMKLSIALIDIKVVLQETILNVWAKAEKKRIHLLLECEGTIYIKGDANRLKQVFLNLVDNAVKFSPEDSSIVLSTHRLSKEEMAVIVRDSGIGISEAHLSRVRDRFFQVDALNGGTGLGLAISQQIVELHHGKLELDSELGKGTQVTVILPLTEEQPPVAAEGENGPELL
>NZ_CP009241.1|WP_038592865.1|4437853_4438552_-|response-regulator-transcription-factor
MSKVLILEDEESIRSFIVINLKRNGFEVLEAADGNEALHKLTTVPDIDIALLDVMVPGIDGFEVCRRIRETNERLGIIFLTAKVQEQDKVYALSVGADDHVSKPFSPTELIARIQSLLRRVNVHREQSAKVSFHSGPFTLDLISKQFKRSGEGIELTPTEFSLVQFFLEKENTPLSRDSLLDHVWGKEYMGDPKIVDVNIRRLRQKIENNPSEPEYLQTVWGHGYKWKGQGQ
>NZ_CP009241.1|WP_156130893.1|4438544_4439828_-|hypothetical-protein
MNNRVLRRLAAVSLSLSILSGCTFISDPVLRMKAPELSADKASLMTAITSHMPAGASLIRPVSDDDSSIFTEDLDKDGTMETLVFYSTKNEAVLIHGMILEKRDDVWEKKLVFDGGGTELDSVDLRDVTGEGKLNIIAGYSRGVEKGMVVYSYSGGELEEVLSQPYTKYMVDDLNEDGIEDITVVYFKRNEFATITTYQYNDGFKVLDELDDLDPYFSNYYNIVSGKVAENKEGIVLDSAVDSRSAYTTVVVMENNKLRVVIPGDARTFKDRKIVSEDIDGDGVIEIGLLEPPKGWEYFDPETIPYFNSYYKWDGKNGLTFSALQYRDPSDRFRIDLLPEWHENVTVDTKSVQDKSLKFILSNTGETVAEISFFSPAEWERVKSSGWKILGFDLDKFIGYRGEVEQNTSGGDNNKITSPIERKGIDE
>NZ_CP009241.1|WP_038592869.1|4439863_4440589_-|ATP-binding-cassette-domain-containing-protein
MITVEHLAKAVGEEKLPVLQDIGFQLEPGELVVLLGASGSGKSTLLRCLALKEKWDRGNFRVDGVNILGNVFTGKRKIRREWAYLEQNAELNPNRTALKNVLIGQSSQTPLWRMVTGMVRSDDYMGAMDELDLLGLLDKAKMKTSQLSGGERQRVAIARALVHGAKVILADEPVTGLDPRTAEGVLETLRKLCKETGLTVVTVLPLELAERYATRLWVLEDGRIKHDVKGRRLTSQERLHL
>NZ_CP009241.1|WP_156130894.1|4440680_4441859_-|MFS-transporter
MSDRLTATSKLNNKWNYMILITVIIAAGLSQGLLLPVLSILLEQKGVSSSLNGLNAAALYVGTFAMTLAAERVLGAIGFKKLIAAGLSLVLVALLLFPLLPGIKVWFVLRLFVGIGDSAINYAAQLWVLLMTPAEHRGRNLSLYGMSYGLGFSLGPIGISLLRYGQAAPFLIIAALFVLVLLLVLIKLPDSHPDKVEHGEGQARRFGRSYSLAWYALIPALLYGYMEASLNSNFPVYGLRIGYSTDQIAALLPFAGIGGLLLQLPLGIWSDRYGRKKILIFSGVSGGLAFTLLPLSGNHFLLTLVVLMVAGGLVGSFFSLGLSYAADILPRNLLPAANVVSSFHFSIGSIVGPGIGGLLLEFGWGGGVFVLLGAFYILFGLAGLLFSPRQLN
>NZ_CP009241.1|WP_038592871.1|4442126_4443050_+|helix-turn-helix-transcriptional-regulator
MSYELKIDVSPVYELLDSFMIYVTGKWISNLDIGPDWVRDLDGRIPPQQVSALKQAAEWPFTDYDVLYAWAYNRGPGSKVLQFLDELESSSLEERFGRLSPLFPDFTIEECKRIRDSYAPLLRLWYDQYFRHVEQKILPLLIEDASEKKLLESKMDPGALIEYASGGVVVGDIPDLQTIVLLPTVHNRPINTYCFYNTLMIIQYPVDVPSEDEDEPPTVLLRLTKALSDPTRLRLLRYVANEPKTIWDMQSDLNQSSEMLMHHLLILRVAGLLRVHLGSEGEGNERFSIRADGASDLQMFLESYIRL

Crispr_ID: NZ_CP009241_14

• CRISPR_ID: NZ_CP009241_14
• CRISPR_location: 4441877-4441969
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_14

Consensus_repeat	Method
AGTTTTGTGAGCATTTACTTCCTGAGTCGC	CRISPRCasFinder

spacers of NZ_CP009241_14

>14.1|4441907|33|NZ_CP009241|CRISPRCasFinder
TTCGAACAAAACTGGCTTCGAAAGCATACGCTT

CRISPR arrays and Neighbor proteins around NZ_CP009241_14

CRISPR arrays

The CRISPR arrays of NZ_CP009241_14

>merge|NZ_CP009241|14|4441877-4441969|CRISPRCasFinder
AGTTTTGTGAGCATTTACTTCCTGAGTCGCTTCGAACAAAACTGGCTTCGAAAGCATACGCTTAGTTTTGTGAGCATTTGCTTCCTGAGTCGC

>NZ_CP009241|14|12|4441877-4441969|CRISPRCasFinder
AGTTTTGTGAGCATTTACTTCCTGAGTCGC	TTCGAACAAAACTGGCTTCGAAAGCATACGCTT
AGTTTTGTGAGCATTTGCTTCCTGAGTCGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038592857.1|4432926_4434852_-|1,4-alpha-glucan-branching-protein-GlgB	unknown	unknown	gnl|CDD|235445
NZ_CP009241.1|WP_038592851.1|4429565_4431311_+|alpha-glycosidase	unknown	unknown	gnl|CDD|200477
NZ_CP009241.1|WP_156130895.1|4450638_4451079_-|IS3-family-transposase	unknown	unknown	gnl|CDD|222853
NZ_CP009241.1|WP_038592879.1|4444832_4447115_-|type-IA-DNA-topoisomerase	unknown	unknown	gnl|CDD|236078
NZ_CP009241.1|WP_038592854.1|4431466_4432891_-|glycogen-synthase-GlgA	unknown	unknown	gnl|CDD|234809
NZ_CP009241.1|WP_038592873.1|4443156_4443909_+|HAD-family-hydrolase	unknown	unknown	gnl|CDD|223943
NZ_CP009241.1|WP_038592848.1|4428332_4429154_-|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl|CDD|270338
NZ_CP009241.1|WP_156130896.1|4451145_4451313_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_156130894.1|4440680_4441859_-|MFS-transporter	unknown	unknown	gnl|CDD|341030
NZ_CP009241.1|WP_038592888.1|4451718_4452144_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038592863.1|4436420_4437857_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP009241.1|WP_038592860.1|4435068_4436298_+|glucose-1-phosphate-adenylyltransferase	unknown	unknown	gnl|CDD|179997
NZ_CP009241.1|WP_038592871.1|4442126_4443050_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|378968
NZ_CP009241.1|WP_038592876.1|4444006_4444735_+|DsbA-family-protein	unknown	unknown	gnl|CDD|372611
NZ_CP009241.1|WP_038592882.1|4447366_4447840_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_156130893.1|4438544_4439828_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_156130897.1|4452977_4453424_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038592869.1|4439863_4440589_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|226164
NZ_CP009241.1|WP_038592890.1|4452272_4452545_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038592865.1|4437853_4438552_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038592857.1|4432926_4434852_-|1,4-alpha-glucan-branching-protein-GlgB	gnl|CDD|235445	PRK05402, PRK05402, 1,4-alpha-glucan branching protein GlgB.	0
NZ_CP009241.1|WP_038592851.1|4429565_4431311_+|alpha-glycosidase	gnl|CDD|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0
NZ_CP009241.1|WP_156130895.1|4450638_4451079_-|IS3-family-transposase	gnl|CDD|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	1.28663e-32
NZ_CP009241.1|WP_038592879.1|4444832_4447115_-|type-IA-DNA-topoisomerase	gnl|CDD|236078	PRK07726, PRK07726, DNA topoisomerase 3.	0
NZ_CP009241.1|WP_038592854.1|4431466_4432891_-|glycogen-synthase-GlgA	gnl|CDD|234809	PRK00654, glgA, glycogen synthase GlgA.	0
NZ_CP009241.1|WP_038592873.1|4443156_4443909_+|HAD-family-hydrolase	gnl|CDD|223943	COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only].	1.45358e-17
NZ_CP009241.1|WP_038592848.1|4428332_4429154_-|transporter-substrate-binding-domain-containing-protein	gnl|CDD|270338	cd13620, PBP2_GltS, Substrate binding domain of glutamate or arginine ABC transporter, a member of the type 2 periplasmic binding fold protein superfamily. This family comprises of the periplasmic-binding protein component (GltS) of an ABC transporter specific for glutamate or arginine from Lactococcus lactis, as well as its closely related proteins. The GltS domain belongs to the type 2 periplasmic binding protein fold superfamily (PBP2), whose many members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	9.74745e-81
NZ_CP009241.1|WP_156130894.1|4440680_4441859_-|MFS-transporter	gnl|CDD|341030	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MFS-type transporter YcaD, Bacillus subtilis MFS-type transporter YfkF, and similar proteins. They are uncharacterized transporters belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.18355e-71
NZ_CP009241.1|WP_038592863.1|4436420_4437857_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.16479e-61
NZ_CP009241.1|WP_038592869.1|4439863_4440589_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|226164	COG3638, COG3638, ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism].	2.35537e-69
NZ_CP009241.1|WP_038592871.1|4442126_4443050_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|378968	pfam12840, HTH_20, Helix-turn-helix domain. This domain represents a DNA-binding Helix-turn-helix domain found in transcriptional regulatory proteins.	2.06326e-05
NZ_CP009241.1|WP_038592876.1|4444006_4444735_+|DsbA-family-protein	gnl|CDD|372611	pfam13462, Thioredoxin_4, Thioredoxin.	2.14396e-37
NZ_CP009241.1|WP_038592860.1|4435068_4436298_+|glucose-1-phosphate-adenylyltransferase	gnl|CDD|179997	PRK05293, glgC, glucose-1-phosphate adenylyltransferase; Provisional.	0
NZ_CP009241.1|WP_038592865.1|4437853_4438552_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	6.04648e-82

Protein sequences

>NZ_CP009241.1|WP_156130894.1|4440680_4441859_-|MFS-transporter
MSDRLTATSKLNNKWNYMILITVIIAAGLSQGLLLPVLSILLEQKGVSSSLNGLNAAALYVGTFAMTLAAERVLGAIGFKKLIAAGLSLVLVALLLFPLLPGIKVWFVLRLFVGIGDSAINYAAQLWVLLMTPAEHRGRNLSLYGMSYGLGFSLGPIGISLLRYGQAAPFLIIAALFVLVLLLVLIKLPDSHPDKVEHGEGQARRFGRSYSLAWYALIPALLYGYMEASLNSNFPVYGLRIGYSTDQIAALLPFAGIGGLLLQLPLGIWSDRYGRKKILIFSGVSGGLAFTLLPLSGNHFLLTLVVLMVAGGLVGSFFSLGLSYAADILPRNLLPAANVVSSFHFSIGSIVGPGIGGLLLEFGWGGGVFVLLGAFYILFGLAGLLFSPRQLN
>NZ_CP009241.1|WP_038592869.1|4439863_4440589_-|ATP-binding-cassette-domain-containing-protein
MITVEHLAKAVGEEKLPVLQDIGFQLEPGELVVLLGASGSGKSTLLRCLALKEKWDRGNFRVDGVNILGNVFTGKRKIRREWAYLEQNAELNPNRTALKNVLIGQSSQTPLWRMVTGMVRSDDYMGAMDELDLLGLLDKAKMKTSQLSGGERQRVAIARALVHGAKVILADEPVTGLDPRTAEGVLETLRKLCKETGLTVVTVLPLELAERYATRLWVLEDGRIKHDVKGRRLTSQERLHL
>NZ_CP009241.1|WP_156130893.1|4438544_4439828_-|hypothetical-protein
MNNRVLRRLAAVSLSLSILSGCTFISDPVLRMKAPELSADKASLMTAITSHMPAGASLIRPVSDDDSSIFTEDLDKDGTMETLVFYSTKNEAVLIHGMILEKRDDVWEKKLVFDGGGTELDSVDLRDVTGEGKLNIIAGYSRGVEKGMVVYSYSGGELEEVLSQPYTKYMVDDLNEDGIEDITVVYFKRNEFATITTYQYNDGFKVLDELDDLDPYFSNYYNIVSGKVAENKEGIVLDSAVDSRSAYTTVVVMENNKLRVVIPGDARTFKDRKIVSEDIDGDGVIEIGLLEPPKGWEYFDPETIPYFNSYYKWDGKNGLTFSALQYRDPSDRFRIDLLPEWHENVTVDTKSVQDKSLKFILSNTGETVAEISFFSPAEWERVKSSGWKILGFDLDKFIGYRGEVEQNTSGGDNNKITSPIERKGIDE
>NZ_CP009241.1|WP_038592865.1|4437853_4438552_-|response-regulator-transcription-factor
MSKVLILEDEESIRSFIVINLKRNGFEVLEAADGNEALHKLTTVPDIDIALLDVMVPGIDGFEVCRRIRETNERLGIIFLTAKVQEQDKVYALSVGADDHVSKPFSPTELIARIQSLLRRVNVHREQSAKVSFHSGPFTLDLISKQFKRSGEGIELTPTEFSLVQFFLEKENTPLSRDSLLDHVWGKEYMGDPKIVDVNIRRLRQKIENNPSEPEYLQTVWGHGYKWKGQGQ
>NZ_CP009241.1|WP_038592863.1|4436420_4437857_-|HAMP-domain-containing-histidine-kinase
MIKKGMRRQIVLHYILVVFVALLLVEVIFLLAIRTYYYDSVYNKITTQIGISENFYKFTFSNEGSPVHFQKLLEYFDMDNTELEILTLNGDILTGSTPFQPDRTITTSDVSEAVGGSIGRWVGRQAGTNESVMAVSKMLHINGRDSFIVRYLTSMERINSDLLNLTLVSIGIGGAVMAIVMLFSFGLANSIVKPLNNITAVSAQMAKGRFTTRIKGDYKYEIGDLATTLNYMADEIIRSNQIKDDFISSISHELRTPLTSIKGWSETLISGGYDPEETKLGMGIISKESDRLIGLVEEILDFSKLQQNEMKLSIALIDIKVVLQETILNVWAKAEKKRIHLLLECEGTIYIKGDANRLKQVFLNLVDNAVKFSPEDSSIVLSTHRLSKEEMAVIVRDSGIGISEAHLSRVRDRFFQVDALNGGTGLGLAISQQIVELHHGKLELDSELGKGTQVTVILPLTEEQPPVAAEGENGPELL
>NZ_CP009241.1|WP_038592860.1|4435068_4436298_+|glucose-1-phosphate-adenylyltransferase
MSKKECIAMLLAGGEGRRLAPLTSTMAKPAVPFGGQYRIIDFPLSNCVNSNIDTVGVLTQYEANSLHQHIGEGEPWGLHSTTNQGVRLLPSGVEGRESYSGTADAIYKNIEFIDNQNPEHVLILSADHIYHMDYRKMLDYHIGKSAKATISVMEVPWDEASRFGVMNVNEELQISEFAEKPKVPKSNLASMGIYLFEWKYLKEHLLRDAANQASSHDFGKDVIPTMLEANDELFAFRFEGYWRDVGTVGSLWEAHMDLLQADNGFKLDNSKWPMYSRARRTKPAAVKPRMQLQIKTADCLVNETCLLEGSLQRSVVFGGVEIGKMTMIKQSVIMPGARIGRGVVIENAIIGEGAVIKDGAVIKGSVDNIVVVGPNEIVAAKPVIRTQPSRLLQEVYEKTGRLRAEGLPS
>NZ_CP009241.1|WP_038592857.1|4432926_4434852_-|1,4-alpha-glucan-branching-protein-GlgB
MPDIQEAENLPSFEDIYLFHEGTNYRSYTMLGAHIAAEEGMTGVRFTVWAPHATYVGLAGNHNGWDGTQDVDSLYKIPDSGFWSRFFPGIEPGTFYKYRIVAANGDSFLKADPYAFKAEVRPATASVVADLNGYSWGDAAWRRRTKAPYNGPMNIYEMHFGTWRQKEDGEFYTYREMSDLLIPYLLEMSYTHVEFMPLAEHPYDLSWGYQGTGYFAATSRYGEPHELMYLIDQLHQAGIGVILDWVPAHFAKDAHGLRMFDGSTLYEYADPMLAEKPGWGTLSFDFSKPEISSFLISNALFWFEQYHIDGMRVDAVTSMLRLDFEKQGHQFRRNQNGGLENLEAIRFIQQLNKAIFQYYPKALMMAEESSAWPGVTSPAHQGGLGFNYKWNMGWMNDTLGYIEHDFGARPYHHNLLTFPICYAYAENYTLPLSHDEVVHGKKSLLDKMPGSYEQKFAGLRLLLGYQITHPGKKLLFMGGEFGQFIEWKDQEQLDWLLLDYESHRGMLAYTAALNKLYLAEKALWELDHDMEGYQWIDADDNGQSIVSYIRRGKRPVDTLLVIINFQPVERRQYRIGVPRPGTYEEIFSSEGIQFGGSGASNEPMKSSKKEWHNQLNSIELTIPALGFLVLKKSGRKVVKQA
>NZ_CP009241.1|WP_038592854.1|4431466_4432891_-|glycogen-synthase-GlgA
MKVLFAAAEAHPFVKTGGLADVIGALPKALKGAGVDVRVILPKYRGIPEKFTSQMEHVAVVDVPVGWRNQYCGIEQIIYDGIPVYFIDNEYYFGRDGIYGYLDDGERFAFYNRAVLECLPAINFQPDVLHCHDWHAAVIPMLLQGHYRHDPFYSEMRTVFTIHNLLYQGVFPYSVLGELLGLDDSYFSGVEYYGNVNYMKGGIVHSDHVTTVSPTYAEEIRTAYYGYGLDGLLSSRADSLSGIVNGIDTKSYNPNSDPQIFTRYRSNLAKKAENKLGLQQELGLPVAPYIPMVAMVTRLVDSKGLDLLTRVLDELLYYDDIQFVLLGTGDESYERWFREAAWRYPTKLSSQILFNDALSRKIYAASDLFLMPSKFEPCGISQLLALRYGSIPVVRETGGLNDTVHAYNEETGEGNGFTFKDYNAHDMMHTLRRAVSFYRKPEDWKKVTKNAFAGDYSWNVSAQQYIDIYNKIIQ
>NZ_CP009241.1|WP_038592851.1|4429565_4431311_+|alpha-glycosidase
MLLEAMYHVPRDKWAYAYDTKTIHLRVRTKRDDVDCVAALTGDKYDWDHTFYEIMMEKAASDDRFDYWEAAVRPKYKRLSYTFRVSKGQENVYLLDNGIRSECPQPPNHFYEFPYIHQIDLFKVPNWAKDAVFYQIMTERFANGDPTNDPEGTEAWGGTPKLDNFFGGDLQGVLDHLDDLHELGINAVYFTPLFLSPSNHKYDIVDYKKVDPHFGDNELLKHVVEECHRRGIRVMLDAVFNHCSDKFPPFQDVLEKGEYSVYKDWFHINSFPAVVADGIPTYDTFGFFGNMPKFNTANYEVRAYLLEVAEYWIKEIKVDGWRLDVANEVDHHFWRDFRKVVKSANPEAYIVGEVWSDSLTWLLGDQFDSVMNYPFSGTVLEFFNGGMDGITFGQRIGALLMRYPQQTNEVVFNLLGSHDTPRLLTVVGEDKRRLKLAVVFLFTFMGTPCIYYGDEIGLTGSEDPDCRKCMEWDEKKQDRELYDFYRMMIFLRKGHKALREGRFRILVACENDPCIVYERADEIIHFTVWMNNSAEPRTLRHPMETDDWQDALTGEPVAPKEGIMHISLDPYGYRILCRNLS
>NZ_CP009241.1|WP_038592848.1|4428332_4429154_-|transporter-substrate-binding-domain-containing-protein
MKKWGKLSLGMLLAVGLMTGCGTNNNEDNKNAASNGNAGSETAAKTLTLGTSAEFPPYEFHKMIDGKDTIVGFDIEIAKDIAADMGAELVIRDLPFDSLLNELSSGRVDIVISGLSYTPKRAEAVGLSDVYFKAEQAVVVREADKAKFATMDALKNTKIGIQTGSIQEDIAKEIEGAKLTSLTKMTEIVMQLQSNRVDASIMEGPVAESFVKNVKGLVITDAKPVVEDDGYVIGVKKGNTELLDQVNTTLKRLTADGKIEEYVSAASDLSISK
>NZ_CP009241.1|WP_038592871.1|4442126_4443050_+|helix-turn-helix-transcriptional-regulator
MSYELKIDVSPVYELLDSFMIYVTGKWISNLDIGPDWVRDLDGRIPPQQVSALKQAAEWPFTDYDVLYAWAYNRGPGSKVLQFLDELESSSLEERFGRLSPLFPDFTIEECKRIRDSYAPLLRLWYDQYFRHVEQKILPLLIEDASEKKLLESKMDPGALIEYASGGVVVGDIPDLQTIVLLPTVHNRPINTYCFYNTLMIIQYPVDVPSEDEDEPPTVLLRLTKALSDPTRLRLLRYVANEPKTIWDMQSDLNQSSEMLMHHLLILRVAGLLRVHLGSEGEGNERFSIRADGASDLQMFLESYIRL
>NZ_CP009241.1|WP_038592873.1|4443156_4443909_+|HAD-family-hydrolase
MKYSTQQVIFDLDDTLVHCNKYFDLILGQYFELMSDWFSGIGPTTSEVRTKQAEIDVETVSTSGLASENFPKSLIATYHYFCAKFNRSTDPYQEQQLMKLGLSVYDQEIEAYPGMVETLDSLKQDGHDLYLYTGGDDTIQQRKIEQMKLDVYFNDRIFIRQHKNVESLENILSTYPFERQRTWMIGNSLRTDVLPAVTAGINSIYLKQQNEWLYNLIELQREMQQSVVTISSIHEVTPVIRTASLRQNHG
>NZ_CP009241.1|WP_038592876.1|4444006_4444735_+|DsbA-family-protein
MNKKTNPKNTPDSRRLLPMLLAVVVVILLGVLVYITTSNKDDEAIVFDNLPNYTDVKGTIVVDGLKYEKQPHLGSEDAKVKVIEFADFKCPACKKWTATYLDTFIKDYVDSGKVQFYFMNFAFIDRDSYLGASAGEAIYKQSNEKFWEYLHKLYENQGDESKIWITQKFILDFVKDNIDGLDYAQFEQDVQNHTYMYDVKEDFKIAGSYGVNGTPKFMVNGVLLPNSSYETLAAAIEAELVK
>NZ_CP009241.1|WP_038592879.1|4444832_4447115_-|type-IA-DNA-topoisomerase
MKTLIIAEKPDMGRNIAAAIEPKAKNYRSYLEGEQYIITWAIGHLIGLAEPEAYDDKYKKWNINDLPIIPEQFKLVPNARTIDQLKVIGELAKRSDLLVNSCDAGREGQHIFSLIQRHLKLNQPVKRLWISDLTPETIRKGFQELRDGSEYENLTKAARARSEADWLIGMNGSRAFTTKHNVLLSVGRVQTPVLALIYDRQKTIEAFSSLKFFEVEGHFAQNEMTYKGMWQGERLTDGAKAEALAAKVKGKPGRIASYEVKETKEYPNKLYDLTLLQREANGKHAFSAKKTLDIAQALYEKHKVISYPRTNSNYVTEQNIPEMHKTLSALQGTSYDEWVKGANRNLVHKGNKFICNPSKVEDHHAILPTNRKASGLSTDEAKLYDLIVRRFLSQFYPAAEYKVHTVLTEVENENFKTTVKELLSLGWKVIYGDQKKDKAKPSKGKGKEEEEEEEIEVNEPFSVVPADEVLCSNAIVKEKDTQPPKHYTEGTLLKAMESAGKQIEDEELRDAMKDSGLGTPATRAATIERLKNVGYVEMQGKKIAITQKGRTAIELIRGAGVELLTSPEMTGQWERRLNEIARGTAADGQFMENVKRFASMIVDKVRVQSRAAKTSFEGETPSLKGGAKGRSGAGAARKPAGKPAEAKPRKAPGESGAEAAGKAAAAKGDDGPKIIGKCPRPGCGGTIFMGRKGYGCSHYKEGCKFVIWKENHGRTLSDAQVKALIEKGKTGKLKLAGEDGSPQEGKLVLSDVSTGQLTVE
>NZ_CP009241.1|WP_038592882.1|4447366_4447840_-|hypothetical-protein
MSKLNGNERWKTKMLMTEHVEQYEQKQDDEVRKMITVDERTMVRDLILLPYIDTMVSKSLKEIEHSGNILKRAYLMAGQAIQRRIIQDTYQLQKELKQRNIRMMADEQEEFLVYYKIFCRGYQERFGLTRDVMRTEISLRLTKYTADLGAVLKDLQK
>NZ_CP009241.1|WP_156130895.1|4450638_4451079_-|IS3-family-transposase
MNHKKVLSAVKDLFNNKIVAYHMSQRNDNPLVLLTFEKAFHKTKDVTGLIFHRDEGFQYTSHAYHDMLPKVGAQISMSRRGNCYDNASMESFFSHLKTEGLYPYDIRNLDEVQRRIEAYIQFYNQHRPQRRLNKLPPVEYRKQLIA
>NZ_CP009241.1|WP_156130896.1|4451145_4451313_-|hypothetical-protein
MRKYRELGEFGLMHGRGTREEYVNQDRQIQRLKRKNEMLKKCLEIWMQEMKQIGM
>NZ_CP009241.1|WP_038592888.1|4451718_4452144_+|hypothetical-protein
MATIISYGSQAKIPLNPLTIATTVAGIPGAGAGLATAQVNISPANPASFSSRVELNGSFSLTALANSQFFVIIRRAGVDIYRSFFRFTTTTDIQLNVLWVDGPYLGIHNYELVIQNDSNLPINLFGPIAFTATAIGGDGVI
>NZ_CP009241.1|WP_038592890.1|4452272_4452545_+|hypothetical-protein
MKKSPATITADRAFTGAFGLHASALPIYVAVFFSQITHGLLSEEEVHSFTCVMAVSHLPKPPEWLIRITSSGPYLAATSTATIPDVSPPL
>NZ_CP009241.1|WP_156130897.1|4452977_4453424_+|hypothetical-protein
MSIWKWLSGHCPNATFIPHSAVLDIFPIWAVLLRLTGRWRFFYITGEGIALAPAFAVNGAVRSFLSQPAGTLKSPPRFPPSWLSSGVFPKSTLLYNRRSHLSYDTPDVIQLVTDLSRHISSGSVLSYSSDSSALSMVLVICLICGSSF

Crispr_ID: NZ_CP009241_15

• CRISPR_ID: NZ_CP009241_15
• CRISPR_location: 4586208-4586298
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_15

Consensus_repeat	Method
GTGAGCATCTACTCCATTGAATAGCTTC	CRISPRCasFinder

spacers of NZ_CP009241_15

>15.1|4586236|35|NZ_CP009241|CRISPRCasFinder
GTACAAAACTGCTTCGAAAGCATACGCTAAGTCTG

CRISPR arrays and Neighbor proteins around NZ_CP009241_15

CRISPR arrays

The CRISPR arrays of NZ_CP009241_15

>merge|NZ_CP009241|15|4586208-4586298|CRISPRCasFinder
GTGAGCATCTACTCCATTGAATAGCTTCGTACAAAACTGCTTCGAAAGCATACGCTAAGTCTGGTGAGCATCTACTCCATTGAATAACTTC

>NZ_CP009241|15|13|4586208-4586298|CRISPRCasFinder
GTGAGCATCTACTCCATTGAATAGCTTC	GTACAAAACTGCTTCGAAAGCATACGCTAAGTCTG
GTGAGCATCTACTCCATTGAATAACTTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_081965861.1|4574489_4576343_-|HAMP-domain-containing-protein	unknown	unknown	gnl|CDD|225519
NZ_CP009241.1|WP_038593140.1|4571775_4572747_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|226666
NZ_CP009241.1|WP_038600037.1|4578821_4579832_-|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|274014
NZ_CP009241.1|WP_038593164.1|4586346_4587117_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|223979
NZ_CP009241.1|WP_038593172.1|4592746_4593841_-|NADH:flavin-oxidoreductase	unknown	unknown	gnl|CDD|240095
NZ_CP009241.1|WP_038593161.1|4585642_4586185_-|cysteine-hydrolase	unknown	unknown	gnl|CDD|238245
NZ_CP009241.1|WP_038593185.1|4597884_4599036_-|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341467
NZ_CP009241.1|WP_052092147.1|4580246_4580903_-|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|379883
NZ_CP009241.1|WP_038593146.1|4573003_4574518_-|response-regulator	unknown	unknown	gnl|CDD|381091
NZ_CP009241.1|WP_038593177.1|4594013_4594859_-|rhamnulose-1-phosphate-aldolase	unknown	unknown	gnl|CDD|131673
NZ_CP009241.1|WP_038593167.1|4587732_4589340_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl|CDD|184624
NZ_CP009241.1|WP_038593152.1|4581026_4582481_+|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl|CDD|129794
NZ_CP009241.1|WP_038593179.1|4594917_4596174_-|L-rhamnose-isomerase	unknown	unknown	gnl|CDD|179217
NZ_CP009241.1|WP_038593170.1|4589810_4591388_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP009241.1|WP_038593182.1|4596379_4597858_-|rhamnulokinase	unknown	unknown	gnl|CDD|198349
NZ_CP009241.1|WP_038593149.1|4576488_4578795_-|pyruvate-synthase	unknown	unknown	gnl|CDD|239471
NZ_CP009241.1|WP_038593158.1|4584137_4585589_-|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|236426
NZ_CP009241.1|WP_038593155.1|4582587_4583817_-|beta-glucanase	unknown	unknown	gnl|CDD|366548
NZ_CP009241.1|WP_038593171.1|4591400_4592591_-|hypothetical-protein	unknown	unknown	gnl|CDD|238430
NZ_CP009241.1|WP_038600043.1|4587255_4587708_-|membrane-protein	unknown	unknown	gnl|CDD|226923

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_081965861.1|4574489_4576343_-|HAMP-domain-containing-protein	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	7.4732e-43
NZ_CP009241.1|WP_038593140.1|4571775_4572747_-|sugar-ABC-transporter-permease	gnl|CDD|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	8.20174e-121
NZ_CP009241.1|WP_038600037.1|4578821_4579832_-|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|274014	TIGR02175, Pyruvate_synthase_subunit_PorC, 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family. A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins (H. pylori) used as the acceptor. Several related four-subunit enzymes may exist in the same species. This model describes the gamma subunit. In Pyrococcus furious, enzymes active on pyruvate and 2-ketoisovalerate share a common gamma subunit.	8.92264e-36
NZ_CP009241.1|WP_038593164.1|4586346_4587117_-|NUDIX-hydrolase	gnl|CDD|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	7.79952e-35
NZ_CP009241.1|WP_038593172.1|4592746_4593841_-|NADH:flavin-oxidoreductase	gnl|CDD|240095	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	0
NZ_CP009241.1|WP_038593161.1|4585642_4586185_-|cysteine-hydrolase	gnl|CDD|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	7.48841e-48
NZ_CP009241.1|WP_038593185.1|4597884_4599036_-|iron-containing-alcohol-dehydrogenase	gnl|CDD|341467	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase. This family includes 1,3-propanediol (1,3-PD) dehydrogenase, a key enzyme in the microbial production of 1,3-PD that has been previously characterized as the product of dhaT gene in Klebsiella pneumoniae. 1,3-PD dehydrogenase is a member of the family III metal-dependent polyol dehydrogenases, which are shown to require a divalent metal ion for catalysis. However, some members of this family showed a dependence on Fe(2+) or Zn(2+) for activity.	0
NZ_CP009241.1|WP_052092147.1|4580246_4580903_-|TetR/AcrR-family-transcriptional-regulator	gnl|CDD|379883	pfam16859, TetR_C_11, Bacterial transcriptional repressor C-terminal. This family of bacterial transcriptional repressors is characterized by the short approximately 50 amino acid stretch of residues constituting the helix-turn-helix DNA binding motif, around the YRFhY motif. The target proteins that are repressed are involved in the transcriptional control of multi-drug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. Another target protein is BetI, an osmoprotectant which controls the choline-glycine betaine pathway in E.coli.	1.14792e-14
NZ_CP009241.1|WP_038593146.1|4573003_4574518_-|response-regulator	gnl|CDD|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.13669e-56
NZ_CP009241.1|WP_038593177.1|4594013_4594859_-|rhamnulose-1-phosphate-aldolase	gnl|CDD|131673	TIGR02624, Rhamnulose-1-phosphate_aldolase, rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.	7.47738e-153
NZ_CP009241.1|WP_038593167.1|4587732_4589340_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl|CDD|184624	PRK14327, PRK14327, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_CP009241.1|WP_038593152.1|4581026_4582481_+|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl|CDD|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.35648e-86
NZ_CP009241.1|WP_038593179.1|4594917_4596174_-|L-rhamnose-isomerase	gnl|CDD|179217	PRK01076, PRK01076, L-rhamnose isomerase; Provisional.	0
NZ_CP009241.1|WP_038593170.1|4589810_4591388_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	5.35048e-26
NZ_CP009241.1|WP_038593182.1|4596379_4597858_-|rhamnulokinase	gnl|CDD|198349	cd07771, FGGY_RhuK, L-rhamnulose kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is predominantly composed of bacterial L-rhamnulose kinases (RhuK, also known as rhamnulokinase; EC 2.7.1.5), which are encoded by the rhaB gene and catalyze the ATP-dependent phosphorylation of L-rhamnulose to produce L-rhamnulose-1-phosphate and ADP. Some uncharacterized homologous sequences are also included in this subfamily. The prototypical member of this subfamily is Escherichia coli RhuK, which exists as a monomer composed of two large domains. The ATP binding site is located in the cleft between the two domains. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of divalent Mg2+ or Mn2+ is required for catalysis. Although an intramolecular disulfide bridge is present in Rhuk, disulfide formation is not important to the regulation of RhuK enzymatic activity. Members of this subfamily belong to the FGGY family of carbohydrate kinases.	0
NZ_CP009241.1|WP_038593149.1|4576488_4578795_-|pyruvate-synthase	gnl|CDD|239471	cd03376, TPP_PFOR_porB_like, Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria. PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways. Archaea, anaerobic bacteria and eukaryotes that lack mitochondria (and therefore pyruvate dehydrogenase) use PFOR to oxidatively decarboxylate pyruvate, with ferredoxin or flavodoxin as the electron acceptor. The 36-kDa porB subunit contains the binding sites for the cofactors, TPP and a divalent metal cation, which are required for activity.	2.43469e-103
NZ_CP009241.1|WP_038593158.1|4584137_4585589_-|nicotinate-phosphoribosyltransferase	gnl|CDD|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NZ_CP009241.1|WP_038593155.1|4582587_4583817_-|beta-glucanase	gnl|CDD|366548	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8.	9.43637e-22
NZ_CP009241.1|WP_038593171.1|4591400_4592591_-|hypothetical-protein	gnl|CDD|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	1.14245e-60
NZ_CP009241.1|WP_038600043.1|4587255_4587708_-|membrane-protein	gnl|CDD|226923	COG4550, COG4550, Predicted membrane protein [Function unknown].	3.83249e-20

Protein sequences

>NZ_CP009241.1|WP_038593161.1|4585642_4586185_-|cysteine-hydrolase
MKALIVIDFTNDFIDGSLPVGQPGIDIASRVNQLTEQFVKSGDFVVMAVDLHEANDSYHPESKLFPPHNLRGSRGRELYGELHNVYEANQKDIYWMDKTRYSAFSGTDLELKLRERGIAELHLIGVCTDICVLHTAVDAYNKGFEIIIHEDAVASFNADGHVWALGHFRGSLGAKVVTAK
>NZ_CP009241.1|WP_038593158.1|4584137_4585589_-|nicotinate-phosphoribosyltransferase
MRRELALHTDKYQINMMYAHWVNGSHKRKAVFEAYFRKLPFGNGFAVFAGLERIAQYISELRFTEEDIRYLSEQEENYAPAFLEELLQFHFQGSIHSMKEGALVFPDEPLIRVEGTIMEAQLVETAILNFMNYQTLIATKASRIKQVAPDDILLEFGTRRAQEADAAVWGARAAYIGGFHATSNMLAGKMFGIPTKGTHAHSWVQSFASEQEAFDAYAKVLPDGVTLLVDTFDTLRSGVPHAINTAKKLEAEGKRMNGIRLDSGDLAYLSRQARKMLDEAGLQYVKIVASNDLDENTIMNLKAQGAAIDTWGVGTQLITASDQPSLGGVYKLVEIESPSGEMVPTIKISSNPEKVSTPGKKEVFRIVGTNGKALADYISFPEETGPRSGARLKLFNPLHPYMKKHVDRYEALPMLEPIYVNGFQVYKLPELNEIRRYHQEQLDLFWPEYLRILNPEVYRVNLSEQVWDRKQQLIAEHMQQDIE
>NZ_CP009241.1|WP_038593155.1|4582587_4583817_-|beta-glucanase
MKRRGKHKLGWKSFLLLCLALLILPAGSAFAAVNKPFPQHTTYTSGTIKPNHVTQTSMDNSVKTKWNAWKAAYLKPAGTGKYYVKYNSAGETVSEAHGYGMLFTVLMGGYDSNAQTYFDGLYNYYTEHPSSLNPYLMSWKQNSSFENIEGEDSATDGDMDIAYSLLLADKQWGSGGTVNYLQAANHIINAIMDDEINQTQWTIRLGDWANSGSYNTATRPSDFMLGHLKAFQAATGDTRWQNVADKTYTIINSLYTGYSTTTGLLPDFVVYSGGVYKPAPANFLEDANDGHYNYNSCRTPWRITTDYLISGDNRALSQLNQLNSWIKTKVSNTPGNIKDGYKLNGTTFGSYNSGAFYAPFGVSAMTSSANQSWLNSLWSHTAGSAAEDYYEDSIKLFSMIVMSGNWWTY
>NZ_CP009241.1|WP_038593152.1|4581026_4582481_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MVRNTANSQKSHKPQKEKMDPVILKITLILVFGALAPLFDSTMVNVAINTLTVDLKSTVSLIQWVITGYVLAMGMTVPVSGWAVNRFGGKKVYMFSLVIFLAGSILCSLSWNPGSLIGFRLLQGAGAGILIPTLQTVLVQSAGGRNLGRIMSIIGIPTVLGPILGPVLGGIIINSWSWRFIFYVNIPVTLIALVLAWRGIPADEPSSDKQSLDIIGLLLMSPAFAILIYGISQISAYGGLNSSRVAVPLLVGLSLMTVFIVYALRTKKAPLLDLRLFTSRVFSASNVTVFLAGMIMNGALLLLPLYYQQVRGESVLFTGLLLIPQGIGMLLTRGWIGGLADRMGSRLIVILSLAVTIAATLPFAVAGFETSPFLLAASLMIRGAALNGLLIPVMVSAYVGLSKAQVPHASISLRIFQTIGGAFGAAILATVIQHELAAHPAPNVNTVAGAYNTAFWWLIGFAIIAFLPALLLTTRKDRSVSKQI
>NZ_CP009241.1|WP_052092147.1|4580246_4580903_-|TetR/AcrR-family-transcriptional-regulator
MDEIKNDPVSQPSQVTGDDDQLSGARRRGDILENAILQAAWDELGEVGYALLTMEKIAARAKTNKTAVYRRWPNKAKIVVAAIIKHVPKPELASFTPDTGDLRKDVFILLQGIAKPLQTIGAETMHGLMVEYHGKDLISSLPELMRPRSEDKLTAAMKSILKNAEKRGELSLETINARVIALPADLLRYEILTTHEPVTDETLIGIVDDVFLPLVIAK
>NZ_CP009241.1|WP_038600037.1|4578821_4579832_-|4Fe-4S-dicluster-domain-containing-protein
MVQLPKLNDLGFFEIRLESIGGLGANLAGKMLAEAGVVGAGLNGVSFSSYGSEKKGSAVKAHIRFCDLDTHIRDTSPVERPHVVGVFHEALAKTVNVTSGIYEHSTVLVNSAKTPEELKELLKMKAGTIAVIDATSIALKEKNRVNMAMLGALFRLCPFLDTETMKGVIEKSLGKKYPQAVQSAITTFERGFNEVKFMDFELPEGESMPEYVRSDISALGYETQPMGGTIINPGSSFLKNLSISRSGMIPAYENESCIHCAQCDTVCPDQCFVWEERLDRKGRSQMFLLGIDYQYCKGCLKCVGACPTSALSILREKEGYADSHTVHHQFDLISQS
>NZ_CP009241.1|WP_038593149.1|4576488_4578795_-|pyruvate-synthase
MAIDYEKEVGSAKVEQKFLYESGNEMAAYAAHQINYHVMGYFPISPSTEVAQFLDTMKASGQHDIMLVPSDGEHSSAGICYGASTAGGRVFNATSAQGYMFMLEQLPVQAGTRMPMVMNLVCRSISGPLNIHGDHSDLYFALNTGWPILMCRDPQSVYDMNLMALKLAEHAKVRLPVMVASDGYFTSHQKRRVQAFAHREDVQKFVGEQPPTGFTDTLDRNNPVTVGPYMNEPDYINNRYQQSVAMYNAGEVFEEIAQEFAELTGRHYPMIEEYRMEDADVAVFLMNSASEIIKDVVDQLRLQGIKAGAISPNMIRPFPQKQIAVALKNVKAITVGDRADSVGGHGGNMVNEIKAALFTYGNTTTKVISRIYGLGGKDFFAEDGHHFFQLAMDAVVADRVEVPFDYYGHNPGEAEKAPKRLLKPMNFESLKTGLITVKQDEVTGKLSVKVPPVRSLMKKPRRLSPGHGACPGCGIFSGLELFFKGIEGDIVALYHTGCAMVTTTGYPYSSHKSTFIHNLFQNGAATLSGVVEMFWERKRRGELDGLGLQEDFTFVMVTGDGGMDIGMGPAIGAALRGHKMIIVEYDNEGYMNTGAQQSYSTPLGHRTSTSSIGKTQQGKVTQHKDTAQIMAATNIPYVFTGCEAYPQDLLKKAAKAQWYAQNEGLVYGKILIACPLNWMSEDKDGTDIVSLAVESCFFPLYEVEQGATNITYNPEDKNKRVEVSVWLKTMGKTRHLLKPENEPALRSFENEVQRRWNRLKAKHEHPDL
>NZ_CP009241.1|WP_081965861.1|4574489_4576343_-|HAMP-domain-containing-protein
MAVFSRNSFLRRFSRLFCNRFKFSTKLIAALSVATLIISGITGLITYKVHLSLFNQEISRQYRQTTKQVLARLDSRVKDMYRITDYITLNPSVKTAILNQTAGATSFERMQVERVLDEQLYQVRLDAPEMIGMRIYDLKGNIMNLGTLSGSFQRLDPTCLEDMIDRLEGTAGEYVWSRVKLDPGSQLEPSNWVMAGRLMRSVDLETYGMMLILFNTSLFESHLKDLRVHEDANAYLFDGDGKLLYSLNGDAESVPDLPELGTDANLIQNEGGISYLYTNQVADKVNFSLVSKVSLEQIQSRSKVILQVAIISALASLFCSWLIITVISRRLLRPLGSLVQGMRRVREGKFDTRVSIRTRDELAFIGDSFNRMTSRIETLIHEVYEREISEKEAELKAIQAQLNPHFLYNTLGMFFWKFYMHGDENSAQLVNNLSEMLQYTLEPVQHLTTLHDEIKQINNYLEIQKARYQEALSTEIDLPDELLNCQVIRLLLQPIVENVFVHAFRNKKNDRRLTISGYRMLAAEENPEQLVLEIADNGSGMEQALIRSILELPGIADDGGRHIGTRSVIRRIELVYGAPYGVDIHSAIGKGTLVRLRLPYHSAGGENGYDRKAARRG
>NZ_CP009241.1|WP_038593146.1|4573003_4574518_-|response-regulator
MIGKLLVVDDEAWFREGLMKLISTNELGWEVVGEAADGEEALAAMELCTPDLVITDINMPVMDGLSLTERLSDSNPNVMVIILTGYREFEYAQRAVRYGAVEFLLKPFSLDEVYRVLRKAYEKFRLNMLEKKVRLKERQINLFRAALYGCPHDLEAGEACSREWAGFSFCILRVQSYYPHEKTYTLRDVGLLHYAVSNIIAELMVRHGVRGIWFPLRSEEFAFLLEPGPVAAAYQSTVRSTVSRYTGIQVCWLDGGILRQLDGLAAKYQKIGITAGGETPPDGMNPQRSYPFKEELLSLLITSNLQGVRERITAYLQKASIMDLQSGKTEVYTMMTAFSDILMDDFRHLKAAGYEALDPGAILMLRSVPELMEWAEGKGRDFIALFAQWLQEKQDNVVLRAKQYIDSHYRGVCTLQTVAGHVHVTPNYLSNLFKKETGIGFTSYVSQLRIERAKSLLAGTKLRMLEIAEESGFDNSSYFTTVFKQLTGKSPSEYRKQTGEGLID
>NZ_CP009241.1|WP_038593140.1|4571775_4572747_-|sugar-ABC-transporter-permease
MKAARTVRGPVFRPGDKVAKHRTRQQALRRFKSNIPLLIMFVPVILFYVIFRYAPIGGLVLAFKDYNFYDGVLNSPWVGFQHFQTLFQDSRTLEIIRNTVGLSLLSVVFGFPIPIILAIMLNEVRNMGFKRTIQTIVYMPHFLSWVIIAMMVTTVFSMEHGIVNNLVEKIYGEPFAFMYSKGSWIAIFVGSGIWKDMGFNAIIFLAALTTIDPSLYEAAGMDGASKLRQIWHVTIPGIRPTIILLLILSMGRVMEVGFDQVYMLQNSNVNQIADVISTYIYRTGLQGAQFSLTTAMGLFESLVAFLLIFSANYIARKFNEGLW
>NZ_CP009241.1|WP_038593164.1|4586346_4587117_-|NUDIX-hydrolase
MSENAEQNYNAKKYRTPDGVPADIVMFTLTKRERKTVTKTLPLRELKVMLIRRKKWPCEGMWALPGGFCQEDESIYDAATRELKEETGVDGGHLEYLGVYSTPGRDPRGWIISHAFFALVEEWMLEQRQASDDAGEVGLFTLQEALEELELAFDHRDIINDAYLRIQQQMLQTTIARQFLPRHFTLSELYQVIQTVVPEFKEPNFIRKITSTRSRQGILKEVSDEAGNPLSSNQYSQRPAQLYMFTDHEPLLSIYT
>NZ_CP009241.1|WP_038600043.1|4587255_4587708_-|membrane-protein
MSQEEPRLNEYGMPTYNTRDLIVREDIMGKAKELASLISTSEEVQHFQQAEQKILNHERVQGLIATIKKKQKEIVAFESFKNKEMVAKIEREIEVLQDEIDGIPVVNEFQQSQSDINYLLQLVISVIRDTVSEKINVEAGTEAPPSTCGD
>NZ_CP009241.1|WP_038593167.1|4587732_4589340_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTMGNNSPDLKFGKGGSKDYSKYFDFSDAKVISEEEGKTTYRIKGRTVQINSNPDYKEGKRRGKQEIEVINFEDTDTNQAMEQFREINRHKQHYYFIATYGCQMNEHDTETMKGMLEQMGYLAAEDRNEADIILLNTCAIRENAEDKVFGELGHLKTLKLEKPGLLLGVCGCMSQEEGVVNRIMSKYGFVDMIFGTHNIHRLPQLVKEAVYSKELVVEVWSKEGDIIENLPKKREGMRAWVNIMYGCDKFCTYCIVPFTRGKERSRRPEDVIAEVRELARQGFKEVTLLGQNVNAYGKDFTDLDYTFGDLMDDMRKIDIPRIRFMTSHPRDFDDRLIEVLGKGGNLAEHIHLPVQSGSTAVLKKMSRKYTREAYMELVRKIKASVPAAVLTTDIIVGFPGETEEQFEETLSLVREVGYDMAYTFIYSPREGTPAAAMEDNVPAEVKSERLQRLNDLIKEQSRISNDRMLGELVEVLVEGESKNNAQVLSGRSSANKLVHFEGSKDLIGSLVQVRITDTKTWYIKGDCVAEAAAVL
>NZ_CP009241.1|WP_038593170.1|4589810_4591388_+|alpha/beta-hydrolase
MAYISRHDIDIHYEYETAKNTSDRTETLVLIHGLGFDLRSWDFMVPYMTDNYHIVRYDLRGHGLSGSSKTTLDKLAALFVENLRMLLEDLQIQTFHIIAHGAGSIIALYFAKAYPDRVRSTVLLSLPLFNSSGTANKYKDYRKKLMTYQSMLALADHVIPNATLYPRHSAETEALYSAFAKVTFDVYLELLDFFAYAHNEIMDLFKQHTHPTLMLTGEQDPMYPPYLSSLIASANPNCRFMTLYNASNMVFYDQPEETFKQIEVFLNSKWINRAPLDPLLLNLHSEFLDMVNNNPAGNAPSVQLKINLLNRFTVAVDDIPIISGWGRRSAKDLLIYLLLNPVVTRDRLCEELWRDMDLVKARGQLRVCLTHLKQLLNNEVTKLIYSDKQQISLQTAVDSDVLTLMAEINRANEETNPELKEPLIHSVFAQIQPDLFRNLNQEWNLHLRVKMEIQLVTLAHQQSDYLASQGKFTAAIAFLKYVLLFNAEEFDAYEQIANLYEQNHQKHEAKKWRLKAEQLQHTKSM
>NZ_CP009241.1|WP_038593171.1|4591400_4592591_-|hypothetical-protein
MNKRIAITGFGVKVPNGENNNDLLDHLISGEYDFTARNDITPNQEPLWVGEVLGDLGTLEDKQYRVLPRISKLAISTSAEALAMAGLDLTDPGNKTGVFFGTTMGGTTPLEEMVHYASAGKFREMPVYCCGLVHYHSLASSISSFFHLTGISKTVTTGCTAGLEALEDAMLYLQSGKINTAIIGAADSSNNKVTVYGFGKIRALPFNQDIRNSGSPFNKKSKGFILSEGAASLVLETEEHALSRNATIYGYVDTVSTNNDAESVNGQDKTGRNMKRAVNDVLGNRRPDYFNSQALGYDANDRIEDIVSRDIFQHEVPLTSIKGLIGHPFSVSGLAQIIASLLGFQHHFIPGTIRTDQLGYEHLPLITKTLPKATSEVLITSHGYGGNNACVYLTKQ
>NZ_CP009241.1|WP_038593172.1|4592746_4593841_-|NADH:flavin-oxidoreductase
MNTDKLFTPFQVGTLSLQNRIVMAPMTRAYSPNGVATEAVAEYYRKRTEGGVGLIVTEGTAINHPSAVSHPNIPNIHGEAALAGWAKVVEEVHAAGGKIIPQLWHVGMARNIGELPNAEALPIGPSGLNLAGQQITEPMTQQEIDGIIAAFAQAAVDAKRIGFDGIELHGAHGYLIDQFFWEKTNQRTDQYGGDLEARTTFAVEVIDACRRAVGPDFPIVLRFSQWKSGDYSAKLAQTPEELSRFLTPLSNAGVDIFHCSTRRFWLPEFEGSELNLAGWTKKITGKPTITVGSVGLNSEFTSAVKEENEEDNIERLLEKLEQAEFDLVAVGRALISDPQWPAKVQSGRMDEIIPFTSESTKTLN
>NZ_CP009241.1|WP_038593177.1|4594013_4594859_-|rhamnulose-1-phosphate-aldolase
MSTSVMKSKGYIAGIEAPFIQEMSEITHHMWSLGWDELNGGNVSYLLEEDEVAKYINVREPLRTINLTFPVTELAGKYFIVTGSGKYFRNVIKDPEANLGVLRVTDSGESVEVLWGLRNNAVPTSELASHFMSHIERLKVDPNHRIVLHTHATNVIAMTFTHDLDELKFTKTLWEMCTECLVVFPDGVGVIPWIVPGSSEIGRATADKMKEYRVVIWPQHGIFVTGGTMDATFGLVETIEKAAIVYNLIGGREIKQKITDRQLADLAAAFHVTPKAGILEL
>NZ_CP009241.1|WP_038593179.1|4594917_4596174_-|L-rhamnose-isomerase
MDQSIMNSYNEAKKLYAAHGINVDEVLEKLAQIKISLHCWQGDDVRGFLFKDKELSGGIAVTGSYPGRAGTPEELRQDLEKALSLIPGKHKVNLHAIYADTDEKVDLDELEPRHFASWVDWAKEQGLGLDFNPTCFSHPNAADGFTLSHADEAIRSFWIKHCKASRRIAEHFGRELGQPCVTNFWVPDGYKDTPVDRLAPRMRLKESLDEVFSEEIDPQYNIDAVESKLFGIGSESYVVGSHEFYMGYGLTRGKAICLDAGHFHPTEVISNKLSSILMFSEQLLLHVSRPVRWDSDHVVTMDDELLEIARELVRGDLLPRTNIGLDFFDGSINHIAAWVIGTRNTIKALLRAMLEPVAELKAVELAGDYTSRLALVEEFKSYPFGAVWDYYCASQNTPVREQWLAEVKSYEQEVLAAR
>NZ_CP009241.1|WP_038593182.1|4596379_4597858_-|rhamnulokinase
MNNHIAVDIGASSGRLVLGTIVDGSLTLEEIHRFSNGFTERDDSCFWDVDYLLEQIITGLQKAKAGGVTKCTLGIDTWAVDYVLLDAEGNRIQEVYAYRDRRTDGVMEEVAKLISPEAVYAKTGIQQLTFNTLYQLYVHDREELAKADQILLVPDYLYYRLCGRKINEVTNASTTQLLNLASRDFDPELLALLQLERAQFAGLTEPGEDLGSISDSLMLQYDLPECRLICVATHDTASAVLGIPAQSGRSSAYISSGTWSLLGAQLDQPINNRSAREANYTNEWGAYGTYRFLKNIMGLWLIQEVRRLDGSRYSFAELAEQAAAAEGFRSLIGCNDPRFLNPDNMIEEIRLFCAESGQPVPQSPGELARCIFDSLALSYRSYLEELEALTGTAIEVLQIVGGGANNELLCQLTADVIGKEVLAGPTEATALGNIAVQLIQSGKVADIHEARTLIGQSFEIKSYLPRPMPQLGELLVRWEELNAAETATSEGA
>NZ_CP009241.1|WP_038593185.1|4597884_4599036_-|iron-containing-alcohol-dehydrogenase
MSTHVYYVPSINIMGKGCLKEIGPYIQELNLQKALVVTDKFLVKSGIAGKLLAVLDEAGINYVVYDEVKPNPTCKNVHDGVDFLKQHECDYLVSIGGGSPQDTAKAIGIVATNGGHIAEYEGVHKSQHKSLPIIAVNTTAGTSSEVTINYVITDEKRKVKMVMVDKNSIATISVNDPELMVDKPAALTAATGMDALTHAVEALVTPGAYPVTDATALAAVELIFANLARTVKDGHDIEAREQMVYAIFLGGLAFNNAGLGYVHAMAHQLGGVYDLPHGVCNAMLLPYVEEENAKYVPEKFRSIAKAIGLQVNGKSDKECADFVIKSIKALSKEVGIPAKLSELGVDEVDLDLLAENAMKDACAPGNPFIPTKEEVIALFRKIL

Crispr_ID: NZ_CP009241_16

• CRISPR_ID: NZ_CP009241_16
• CRISPR_location: 4596243-4596330
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_16

Consensus_repeat	Method
AAGCATAGGCTTAGTTTTGTGAGC	CRISPRCasFinder

spacers of NZ_CP009241_16

>16.1|4596267|40|NZ_CP009241|CRISPRCasFinder
GATACTTCCGGGAATATTCTTCGAGCAAAACTTGCTCCGG

CRISPR arrays and Neighbor proteins around NZ_CP009241_16

CRISPR arrays

The CRISPR arrays of NZ_CP009241_16

>merge|NZ_CP009241|16|4596243-4596330|CRISPRCasFinder
AAGCATAGGCTTAGTTTTGTGAGCGATACTTCCGGGAATATTCTTCGAGCAAAACTTGCTCCGGAAGCATACGCTTAGTTTTGTGAGC

>NZ_CP009241|16|14|4596243-4596330|CRISPRCasFinder
AAGCATAGGCTTAGTTTTGTGAGC	GATACTTCCGGGAATATTCTTCGAGCAAAACTTGCTCCGG
AAGCATACGCTTAGTTTTGTGAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_081965862.1|4600582_4600909_-|IS3-family-transposase	unknown	unknown	gnl|CDD|222853
NZ_CP009241.1|WP_038593170.1|4589810_4591388_+|alpha/beta-hydrolase	unknown	unknown	gnl|CDD|223669
NZ_CP009241.1|WP_038593172.1|4592746_4593841_-|NADH:flavin-oxidoreductase	unknown	unknown	gnl|CDD|240095
NZ_CP009241.1|WP_038593161.1|4585642_4586185_-|cysteine-hydrolase	unknown	unknown	gnl|CDD|238245
NZ_CP009241.1|WP_038593185.1|4597884_4599036_-|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341467
NZ_CP009241.1|WP_038600046.1|4599644_4600400_+|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl|CDD|224268
NZ_CP009241.1|WP_038593188.1|4600920_4601238_-|transposase	unknown	unknown	gnl|CDD|225511
NZ_CP009241.1|WP_038593167.1|4587732_4589340_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	unknown	unknown	gnl|CDD|184624
NZ_CP009241.1|WP_038593191.1|4601870_4603160_-|serine-dehydratase-subunit-alpha-family-protein	unknown	unknown	gnl|CDD|226206
NZ_CP009241.1|WP_052092149.1|4604341_4605880_-|glucose-6-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|235579
NZ_CP009241.1|WP_063848050.1|4606496_4611260_-|family-43-glycosylhydrolase	unknown	unknown	gnl|CDD|350153
NZ_CP009241.1|WP_038593179.1|4594917_4596174_-|L-rhamnose-isomerase	unknown	unknown	gnl|CDD|179217
NZ_CP009241.1|WP_038593164.1|4586346_4587117_-|NUDIX-hydrolase	unknown	unknown	gnl|CDD|223979
NZ_CP009241.1|WP_038593182.1|4596379_4597858_-|rhamnulokinase	unknown	unknown	gnl|CDD|198349
NZ_CP009241.1|WP_038593196.1|4606080_4606395_+|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|224647
NZ_CP009241.1|WP_038593158.1|4584137_4585589_-|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl|CDD|236426
NZ_CP009241.1|WP_038593177.1|4594013_4594859_-|rhamnulose-1-phosphate-aldolase	unknown	unknown	gnl|CDD|131673
NZ_CP009241.1|WP_038593171.1|4591400_4592591_-|hypothetical-protein	unknown	unknown	gnl|CDD|238430
NZ_CP009241.1|WP_038593194.1|4603376_4604270_-|decarboxylating-6-phosphogluconate-dehydrogenase	unknown	unknown	gnl|CDD|236582
NZ_CP009241.1|WP_038600043.1|4587255_4587708_-|membrane-protein	unknown	unknown	gnl|CDD|226923

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_081965862.1|4600582_4600909_-|IS3-family-transposase	gnl|CDD|222853	PHA02517, PHA02517, putative transposase OrfB; Reviewed.	8.40662e-10
NZ_CP009241.1|WP_038593170.1|4589810_4591388_+|alpha/beta-hydrolase	gnl|CDD|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	5.35048e-26
NZ_CP009241.1|WP_038593172.1|4592746_4593841_-|NADH:flavin-oxidoreductase	gnl|CDD|240095	cd04747, OYE_like_5_FMN, Old yellow enzyme (OYE)-related FMN binding domain, group 5. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Other members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.	0
NZ_CP009241.1|WP_038593161.1|4585642_4586185_-|cysteine-hydrolase	gnl|CDD|238245	cd00431, cysteine_hydrolases, Cysteine hydrolases; This family contains amidohydrolases, like CSHase (N-carbamoylsarcosine amidohydrolase), involved in creatine metabolism and nicotinamidase, converting nicotinamide to nicotinic acid and ammonia in the pyridine nucleotide cycle. It also contains isochorismatase, an enzyme that catalyzes the conversion of isochorismate to 2,3-dihydroxybenzoate and pyruvate, via the hydrolysis of the vinyl ether bond, and other related enzymes with unknown function.	7.48841e-48
NZ_CP009241.1|WP_038593185.1|4597884_4599036_-|iron-containing-alcohol-dehydrogenase	gnl|CDD|341467	cd08188, PDDH, 1,3-Propanediol (1,3-PD) dehydrogenase. This family includes 1,3-propanediol (1,3-PD) dehydrogenase, a key enzyme in the microbial production of 1,3-PD that has been previously characterized as the product of dhaT gene in Klebsiella pneumoniae. 1,3-PD dehydrogenase is a member of the family III metal-dependent polyol dehydrogenases, which are shown to require a divalent metal ion for catalysis. However, some members of this family showed a dependence on Fe(2+) or Zn(2+) for activity.	0
NZ_CP009241.1|WP_038600046.1|4599644_4600400_+|DeoR/GlpR-transcriptional-regulator	gnl|CDD|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	9.48615e-91
NZ_CP009241.1|WP_038593188.1|4600920_4601238_-|transposase	gnl|CDD|225511	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	2.92242e-05
NZ_CP009241.1|WP_038593167.1|4587732_4589340_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB	gnl|CDD|184624	PRK14327, PRK14327, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional.	0
NZ_CP009241.1|WP_038593191.1|4601870_4603160_-|serine-dehydratase-subunit-alpha-family-protein	gnl|CDD|226206	COG3681, COG3681, L-cysteine desulfidase [Amino acid transport and metabolism].	2.06973e-110
NZ_CP009241.1|WP_052092149.1|4604341_4605880_-|glucose-6-phosphate-dehydrogenase	gnl|CDD|235579	PRK05722, PRK05722, glucose-6-phosphate 1-dehydrogenase; Validated.	0
NZ_CP009241.1|WP_063848050.1|4606496_4611260_-|family-43-glycosylhydrolase	gnl|CDD|350153	cd18832, GH43_GsAbnA-like, Glycosyl hydrolase family 43 protein such as Geobacillus stearothermophilus endo-alpha-1,5-L-arabinanase AbnA. This glycosyl hydrolase family 43 (GH43) subgroup includes mostly enzymes with alpha-L-arabinofuranosidase (ABF; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. It includes Geobacillus stearothermophilus T-6 NCIMB 40222 AbnA, Bacillus subtilis subsp. subtilis str. 168 (Abn2;YxiA;J3A;BSU39330) (Arb43B), and Thermotoga petrophila RKU-1 (AbnA;TpABN;Tpet_0637). These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. Many of these enzymes are different from other arabinases; they are organized into two different domains with a divalent metal cluster close to the catalytic residues to guarantee the correct protonation state of the catalytic residues and consequently the enzyme activity. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	1.51246e-152
NZ_CP009241.1|WP_038593179.1|4594917_4596174_-|L-rhamnose-isomerase	gnl|CDD|179217	PRK01076, PRK01076, L-rhamnose isomerase; Provisional.	0
NZ_CP009241.1|WP_038593164.1|4586346_4587117_-|NUDIX-hydrolase	gnl|CDD|223979	COG1051, COG1051, ADP-ribose pyrophosphatase [Nucleotide transport and metabolism].	7.79952e-35
NZ_CP009241.1|WP_038593182.1|4596379_4597858_-|rhamnulokinase	gnl|CDD|198349	cd07771, FGGY_RhuK, L-rhamnulose kinases; a subfamily of the FGGY family of carbohydrate kinases. This subfamily is predominantly composed of bacterial L-rhamnulose kinases (RhuK, also known as rhamnulokinase; EC 2.7.1.5), which are encoded by the rhaB gene and catalyze the ATP-dependent phosphorylation of L-rhamnulose to produce L-rhamnulose-1-phosphate and ADP. Some uncharacterized homologous sequences are also included in this subfamily. The prototypical member of this subfamily is Escherichia coli RhuK, which exists as a monomer composed of two large domains. The ATP binding site is located in the cleft between the two domains. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of divalent Mg2+ or Mn2+ is required for catalysis. Although an intramolecular disulfide bridge is present in Rhuk, disulfide formation is not important to the regulation of RhuK enzymatic activity. Members of this subfamily belong to the FGGY family of carbohydrate kinases.	0
NZ_CP009241.1|WP_038593196.1|4606080_4606395_+|helix-turn-helix-transcriptional-regulator	gnl|CDD|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	6.42872e-36
NZ_CP009241.1|WP_038593158.1|4584137_4585589_-|nicotinate-phosphoribosyltransferase	gnl|CDD|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NZ_CP009241.1|WP_038593177.1|4594013_4594859_-|rhamnulose-1-phosphate-aldolase	gnl|CDD|131673	TIGR02624, Rhamnulose-1-phosphate_aldolase, rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.	7.47738e-153
NZ_CP009241.1|WP_038593171.1|4591400_4592591_-|hypothetical-protein	gnl|CDD|238430	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.	1.14245e-60
NZ_CP009241.1|WP_038593194.1|4603376_4604270_-|decarboxylating-6-phosphogluconate-dehydrogenase	gnl|CDD|236582	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase.	0
NZ_CP009241.1|WP_038600043.1|4587255_4587708_-|membrane-protein	gnl|CDD|226923	COG4550, COG4550, Predicted membrane protein [Function unknown].	3.83249e-20

Protein sequences

>NZ_CP009241.1|WP_038593179.1|4594917_4596174_-|L-rhamnose-isomerase
MDQSIMNSYNEAKKLYAAHGINVDEVLEKLAQIKISLHCWQGDDVRGFLFKDKELSGGIAVTGSYPGRAGTPEELRQDLEKALSLIPGKHKVNLHAIYADTDEKVDLDELEPRHFASWVDWAKEQGLGLDFNPTCFSHPNAADGFTLSHADEAIRSFWIKHCKASRRIAEHFGRELGQPCVTNFWVPDGYKDTPVDRLAPRMRLKESLDEVFSEEIDPQYNIDAVESKLFGIGSESYVVGSHEFYMGYGLTRGKAICLDAGHFHPTEVISNKLSSILMFSEQLLLHVSRPVRWDSDHVVTMDDELLEIARELVRGDLLPRTNIGLDFFDGSINHIAAWVIGTRNTIKALLRAMLEPVAELKAVELAGDYTSRLALVEEFKSYPFGAVWDYYCASQNTPVREQWLAEVKSYEQEVLAAR
>NZ_CP009241.1|WP_038593177.1|4594013_4594859_-|rhamnulose-1-phosphate-aldolase
MSTSVMKSKGYIAGIEAPFIQEMSEITHHMWSLGWDELNGGNVSYLLEEDEVAKYINVREPLRTINLTFPVTELAGKYFIVTGSGKYFRNVIKDPEANLGVLRVTDSGESVEVLWGLRNNAVPTSELASHFMSHIERLKVDPNHRIVLHTHATNVIAMTFTHDLDELKFTKTLWEMCTECLVVFPDGVGVIPWIVPGSSEIGRATADKMKEYRVVIWPQHGIFVTGGTMDATFGLVETIEKAAIVYNLIGGREIKQKITDRQLADLAAAFHVTPKAGILEL
>NZ_CP009241.1|WP_038593172.1|4592746_4593841_-|NADH:flavin-oxidoreductase
MNTDKLFTPFQVGTLSLQNRIVMAPMTRAYSPNGVATEAVAEYYRKRTEGGVGLIVTEGTAINHPSAVSHPNIPNIHGEAALAGWAKVVEEVHAAGGKIIPQLWHVGMARNIGELPNAEALPIGPSGLNLAGQQITEPMTQQEIDGIIAAFAQAAVDAKRIGFDGIELHGAHGYLIDQFFWEKTNQRTDQYGGDLEARTTFAVEVIDACRRAVGPDFPIVLRFSQWKSGDYSAKLAQTPEELSRFLTPLSNAGVDIFHCSTRRFWLPEFEGSELNLAGWTKKITGKPTITVGSVGLNSEFTSAVKEENEEDNIERLLEKLEQAEFDLVAVGRALISDPQWPAKVQSGRMDEIIPFTSESTKTLN
>NZ_CP009241.1|WP_038593171.1|4591400_4592591_-|hypothetical-protein
MNKRIAITGFGVKVPNGENNNDLLDHLISGEYDFTARNDITPNQEPLWVGEVLGDLGTLEDKQYRVLPRISKLAISTSAEALAMAGLDLTDPGNKTGVFFGTTMGGTTPLEEMVHYASAGKFREMPVYCCGLVHYHSLASSISSFFHLTGISKTVTTGCTAGLEALEDAMLYLQSGKINTAIIGAADSSNNKVTVYGFGKIRALPFNQDIRNSGSPFNKKSKGFILSEGAASLVLETEEHALSRNATIYGYVDTVSTNNDAESVNGQDKTGRNMKRAVNDVLGNRRPDYFNSQALGYDANDRIEDIVSRDIFQHEVPLTSIKGLIGHPFSVSGLAQIIASLLGFQHHFIPGTIRTDQLGYEHLPLITKTLPKATSEVLITSHGYGGNNACVYLTKQ
>NZ_CP009241.1|WP_038593170.1|4589810_4591388_+|alpha/beta-hydrolase
MAYISRHDIDIHYEYETAKNTSDRTETLVLIHGLGFDLRSWDFMVPYMTDNYHIVRYDLRGHGLSGSSKTTLDKLAALFVENLRMLLEDLQIQTFHIIAHGAGSIIALYFAKAYPDRVRSTVLLSLPLFNSSGTANKYKDYRKKLMTYQSMLALADHVIPNATLYPRHSAETEALYSAFAKVTFDVYLELLDFFAYAHNEIMDLFKQHTHPTLMLTGEQDPMYPPYLSSLIASANPNCRFMTLYNASNMVFYDQPEETFKQIEVFLNSKWINRAPLDPLLLNLHSEFLDMVNNNPAGNAPSVQLKINLLNRFTVAVDDIPIISGWGRRSAKDLLIYLLLNPVVTRDRLCEELWRDMDLVKARGQLRVCLTHLKQLLNNEVTKLIYSDKQQISLQTAVDSDVLTLMAEINRANEETNPELKEPLIHSVFAQIQPDLFRNLNQEWNLHLRVKMEIQLVTLAHQQSDYLASQGKFTAAIAFLKYVLLFNAEEFDAYEQIANLYEQNHQKHEAKKWRLKAEQLQHTKSM
>NZ_CP009241.1|WP_038593167.1|4587732_4589340_-|tRNA-(N6-isopentenyl-adenosine(37)-C2)-methylthiotransferase-MiaB
MTMGNNSPDLKFGKGGSKDYSKYFDFSDAKVISEEEGKTTYRIKGRTVQINSNPDYKEGKRRGKQEIEVINFEDTDTNQAMEQFREINRHKQHYYFIATYGCQMNEHDTETMKGMLEQMGYLAAEDRNEADIILLNTCAIRENAEDKVFGELGHLKTLKLEKPGLLLGVCGCMSQEEGVVNRIMSKYGFVDMIFGTHNIHRLPQLVKEAVYSKELVVEVWSKEGDIIENLPKKREGMRAWVNIMYGCDKFCTYCIVPFTRGKERSRRPEDVIAEVRELARQGFKEVTLLGQNVNAYGKDFTDLDYTFGDLMDDMRKIDIPRIRFMTSHPRDFDDRLIEVLGKGGNLAEHIHLPVQSGSTAVLKKMSRKYTREAYMELVRKIKASVPAAVLTTDIIVGFPGETEEQFEETLSLVREVGYDMAYTFIYSPREGTPAAAMEDNVPAEVKSERLQRLNDLIKEQSRISNDRMLGELVEVLVEGESKNNAQVLSGRSSANKLVHFEGSKDLIGSLVQVRITDTKTWYIKGDCVAEAAAVL
>NZ_CP009241.1|WP_038600043.1|4587255_4587708_-|membrane-protein
MSQEEPRLNEYGMPTYNTRDLIVREDIMGKAKELASLISTSEEVQHFQQAEQKILNHERVQGLIATIKKKQKEIVAFESFKNKEMVAKIEREIEVLQDEIDGIPVVNEFQQSQSDINYLLQLVISVIRDTVSEKINVEAGTEAPPSTCGD
>NZ_CP009241.1|WP_038593164.1|4586346_4587117_-|NUDIX-hydrolase
MSENAEQNYNAKKYRTPDGVPADIVMFTLTKRERKTVTKTLPLRELKVMLIRRKKWPCEGMWALPGGFCQEDESIYDAATRELKEETGVDGGHLEYLGVYSTPGRDPRGWIISHAFFALVEEWMLEQRQASDDAGEVGLFTLQEALEELELAFDHRDIINDAYLRIQQQMLQTTIARQFLPRHFTLSELYQVIQTVVPEFKEPNFIRKITSTRSRQGILKEVSDEAGNPLSSNQYSQRPAQLYMFTDHEPLLSIYT
>NZ_CP009241.1|WP_038593161.1|4585642_4586185_-|cysteine-hydrolase
MKALIVIDFTNDFIDGSLPVGQPGIDIASRVNQLTEQFVKSGDFVVMAVDLHEANDSYHPESKLFPPHNLRGSRGRELYGELHNVYEANQKDIYWMDKTRYSAFSGTDLELKLRERGIAELHLIGVCTDICVLHTAVDAYNKGFEIIIHEDAVASFNADGHVWALGHFRGSLGAKVVTAK
>NZ_CP009241.1|WP_038593158.1|4584137_4585589_-|nicotinate-phosphoribosyltransferase
MRRELALHTDKYQINMMYAHWVNGSHKRKAVFEAYFRKLPFGNGFAVFAGLERIAQYISELRFTEEDIRYLSEQEENYAPAFLEELLQFHFQGSIHSMKEGALVFPDEPLIRVEGTIMEAQLVETAILNFMNYQTLIATKASRIKQVAPDDILLEFGTRRAQEADAAVWGARAAYIGGFHATSNMLAGKMFGIPTKGTHAHSWVQSFASEQEAFDAYAKVLPDGVTLLVDTFDTLRSGVPHAINTAKKLEAEGKRMNGIRLDSGDLAYLSRQARKMLDEAGLQYVKIVASNDLDENTIMNLKAQGAAIDTWGVGTQLITASDQPSLGGVYKLVEIESPSGEMVPTIKISSNPEKVSTPGKKEVFRIVGTNGKALADYISFPEETGPRSGARLKLFNPLHPYMKKHVDRYEALPMLEPIYVNGFQVYKLPELNEIRRYHQEQLDLFWPEYLRILNPEVYRVNLSEQVWDRKQQLIAEHMQQDIE
>NZ_CP009241.1|WP_038593182.1|4596379_4597858_-|rhamnulokinase
MNNHIAVDIGASSGRLVLGTIVDGSLTLEEIHRFSNGFTERDDSCFWDVDYLLEQIITGLQKAKAGGVTKCTLGIDTWAVDYVLLDAEGNRIQEVYAYRDRRTDGVMEEVAKLISPEAVYAKTGIQQLTFNTLYQLYVHDREELAKADQILLVPDYLYYRLCGRKINEVTNASTTQLLNLASRDFDPELLALLQLERAQFAGLTEPGEDLGSISDSLMLQYDLPECRLICVATHDTASAVLGIPAQSGRSSAYISSGTWSLLGAQLDQPINNRSAREANYTNEWGAYGTYRFLKNIMGLWLIQEVRRLDGSRYSFAELAEQAAAAEGFRSLIGCNDPRFLNPDNMIEEIRLFCAESGQPVPQSPGELARCIFDSLALSYRSYLEELEALTGTAIEVLQIVGGGANNELLCQLTADVIGKEVLAGPTEATALGNIAVQLIQSGKVADIHEARTLIGQSFEIKSYLPRPMPQLGELLVRWEELNAAETATSEGA
>NZ_CP009241.1|WP_038593185.1|4597884_4599036_-|iron-containing-alcohol-dehydrogenase
MSTHVYYVPSINIMGKGCLKEIGPYIQELNLQKALVVTDKFLVKSGIAGKLLAVLDEAGINYVVYDEVKPNPTCKNVHDGVDFLKQHECDYLVSIGGGSPQDTAKAIGIVATNGGHIAEYEGVHKSQHKSLPIIAVNTTAGTSSEVTINYVITDEKRKVKMVMVDKNSIATISVNDPELMVDKPAALTAATGMDALTHAVEALVTPGAYPVTDATALAAVELIFANLARTVKDGHDIEAREQMVYAIFLGGLAFNNAGLGYVHAMAHQLGGVYDLPHGVCNAMLLPYVEEENAKYVPEKFRSIAKAIGLQVNGKSDKECADFVIKSIKALSKEVGIPAKLSELGVDEVDLDLLAENAMKDACAPGNPFIPTKEEVIALFRKIL
>NZ_CP009241.1|WP_038600046.1|4599644_4600400_+|DeoR/GlpR-transcriptional-regulator
MLAAERRKKIIDLVHQDKRVLVSDLSRMFEVTEETIRRDLEKLEKDGILSRTYGGAMLNRHTNEDLPFVTRGAINTDIKRNIALKALELINDGDTLMVDPSSTSFEFLKLLGNKNNLTVITNSINILHEFASSGMNILSSGGSLRHRSLSLVGPVAHDTIQRYNVDTAVISCKGIDMERGITDSNEPECELKKYMLRQAEKVVLLADHTKFDKTAFTQLVQLNRIDVLITDRKPSEAWLKRLAKENVEVLY
>NZ_CP009241.1|WP_081965862.1|4600582_4600909_-|IS3-family-transposase
MEDHRSEFRLEKMCDTLHVSRSGYYKWRTGETSTQKLRKAAIMERIQYHFADHKKRYGSPKITRLLHKEGYTVTERTVSVYMRQMKLRSVVSKPYRVQTTDSKHELSQ
>NZ_CP009241.1|WP_038593188.1|4600920_4601238_-|transposase
MGEQRQRYNEDFKKQTVKFIQEQTKTLGDLAEELNIPKSTLHQWMGQYRELKNEPAASMDRVRELEAQLKEATRQLQEKELKLADTEEELAIVKKAVHIFSKPRN
>NZ_CP009241.1|WP_038593191.1|4601870_4603160_-|serine-dehydratase-subunit-alpha-family-protein
MVNLLDVLKKEVVPAEGCTEPIAVAYAVSLAAELVQEEITSIQLFLSGNIIKNAMGVGIPGTGQNGLPIAAALGAVIHRSHKKLEILSGLSQAELSKANEIIDRKLLEVELKNTPEKLYIEARVHSESHTATAIIAKEHTHVIFLSKDGIALDLPKDKADCEGSEEMDPEVYAVSLDGIFEFVRTVDFSSLQFLLEGAVMNKAISDEGLRGDYGLQVGKKMLQQSAVNLFGNDVANKVIAATAAASDARMDGSAMPVMTTAGSGNQGIACTLPVIELARLMNKDEETLARALALSNLITVHVKHYIGRLSPLCGSGIAGGVGANSGIIYLMGGSLEQIKHGIQNTIASLSGMICDGAKSTCALKISTATNAAIQAATLAMNNISPTDRDGVIFEEVEDTIRNMERLVQEGLAATDTTILNIMLSKGEVM
>NZ_CP009241.1|WP_038593194.1|4603376_4604270_-|decarboxylating-6-phosphogluconate-dehydrogenase
MKVGLVGLGKMGFNLGQNLLEHDHEVVAFDVNAAAVEEMGSKGAAMAKSLAELVNKLETPRVAWIMVPHQFVDSVIAELTPLLSKGDIIIEAGNSHYKESIRRHEALSKEGIYFLDAGTSGGMEGARNGACYMIGGDEEAWAVVEPLFRDTSVENGYLYAGKSGSGHFLKMVHNGIEYGMMAAIGEGFEVLEKSGYDFNFEEVARVWNNGSVIRSWLMELIERAFSKDAKLDEIKGIMHSSGEGKWTLETAFDLQAATPVIAMALLMRYRSLETDTFTGKVVAALRNEFGGHAVESK
>NZ_CP009241.1|WP_052092149.1|4604341_4605880_-|glucose-6-phosphate-dehydrogenase
MESSTFVLFGATGDLAKRKIYPALYNLFADGKLSGPLSVIGLGRRELSNETFQAQVLDSLRTFSRRKVEESAELQDFLLAFEYSVLDVGRPEDYKKLLAHVQRREELLNIPENRMFYLSVGPEFFGPIAGNINTSGLGDTKGWKRLIIEKPFGRDLKSARELNDSLNAAFTEEEIFRIDHFLGKPMVQNLEVLKYSNPVLRALWQNRYIANVQITAAETVGVEERAGYYDKAGALRDMFQNHMLQLLMMMAMQLPKGSTPEDVRSKKRHVIRSVRPLLKEDVARHVVRGQYAAGEIRGSKVAGYTSEPGIEASSQNETYIAARLWIDDPLWSEVPFYIRTGKRMKEKSTRIVIEFKEPFNDLHNKNRGKLDLDPNLLVIEIGPGEGISLQLNTKNPRQHGQLEPVSIKHESGNPDLPEAYENLIYDALLGDATFFAHWEEVELSWQWVQPIIEATEEGTLPLHSYAAGSYGPDAADELLGEDHWWLDEELPAEQHEPNDVHETDPVAIRPGA
>NZ_CP009241.1|WP_038593196.1|4606080_4606395_+|helix-turn-helix-transcriptional-regulator
MKQDFKPLLAKVEHAYHIIGKKWVNLIIHVLMEGPKRFSELHAIIPDLSKRMLNERLKELEECGLLNRVVIPDRPVKTEYSLTEKGQELGAALCHVEVWAMKWL
>NZ_CP009241.1|WP_063848050.1|4606496_4611260_-|family-43-glycosylhydrolase
MNKMTGKLTSSFLALLLLVLSPIMAASGTVKDNDKAGQLTTKISVPDYTGHWAQDDFQTWVDNGLLTGYGNGVYKPEQNITRAEWVSLVGRVFNLQTLSESRFSDVAEGSVYYNEVMKAVSAGFVSGYGDGTFRPAQTVSRQEAAVMLYRLFQLDASAAAAAPKDAVELPEWSREAVLTLLGDGFLSGYEDGSIKGKRAVTRAEALRLISKLSGQIILKSGTYSDLTARNVIVSTAGVELKNASIAGNLYLTEGIAEGDITLDNVKVAGKIVVTGGGENSVVMSNSTASRLVVNKKNGKLRVIAKGSSAVTDVIVQSGVKLEEDAAATGTGFSKITLEQTLSKNSVVQLSGSFDSVVVNALGEPTLVLNRGSITDMTLNRKTGLRVEAGTEIKNLKVGVKEQITVQGSGKVIFDPAYSSLIKLETPAATATATATAGIGGGTPISPTATPSTMPSATPSAKPTPSPTATPVVSPEATAPVFSNVSVHDPSVVKDGDTYYVFGSHIEAAESQDLMNWSTFTNGYKTPDNTLYGDLSANLAESFAWAGENDSDSKGGFSVWAPDVFWNEDYVNEDGTKGTYMMYYSTSSTYIRSAIGYAVSQNIKGPYTYGGTVLYSGFTAGEAYDANSDVNKKWTNTNIQALIDDGTLEAMNPAWFNTDGTYNNKMYTNAIDPTLFYDKDGKLWMTYGSWSGGIFVLEVDPATGGPKYPGEDGTTADGRIIDRYFGTKISGGNYKSGEGPYVMYDKNTDYYYLYVTYGGLAADGGYSMRQFRSSSPSGPYKDAAGQDAVLTTDGDHSAYGNKLLGNFLFTNVNGDPEFPVYGYVSSGHNSVYYDEDSGKTFNFFHTRFPYRGEAHELRVHQMFMNEDGWPVVAPHRYSGETIGKVAAEDIAGAYQFINHGKDISAKIKSSADIELLADGTIAGSVTGTWKLKDDYYADLLINETQNGTAVERLYKGVFVKLWDSTRQDHVMTFTAMSDQGIAVWGSALETLSDEQLVANATSGLTLGNTSKVYKDLTLPSEGVRGIAITWSSSNEAIVGNDGKVTRPEVGSGDTSVELTATIRLGQASATKTFTVGVVALSGSQLEDGLVGAYDFEGNLEESGGRLEAGTETGNRVNNTGGTITYVSGEDGQAAQLDGRSGIRLPNGLISGSSYSVGMWLNPDELTAFTTAFFGAKSDTNWISLLPYGNGVATTRLWFGSEAWMDADTGLQIKAGEWSHVAFTYDAGTVKMYVNGVLKSTKSGFTNVFTDDSGVFALGVNYWDIPYKGLVDKFRVYEKALSPEAVGWLVNGEPETDTKVTSISFGTAVQQVAAGNSYTPVVSILPANAGNQQLEWSSSTPEVAVVDAVTGVVTALKVGDASITAKATDGSAVTSSYQVKVTDGKIAYYAFDGNLLDSLQLSAAGKATGDKVDSATVGSITYGTGVAGQAAVFDGTSGIRLPDGLLNSSTYSVSMWLNPAQLTDFTTTFFGASTMDSWISLVLQNAGGQTLLWSGTAWYDALTGLLIPLNEWTHVAFTVREGEVKVYINGSEKFSGTGFPDVFINKNAVFTLGINYWNPPFKGLIDELKVYSNTLSAEDVLAEYNLNIN

Crispr_ID: NZ_CP009241_17

• CRISPR_ID: NZ_CP009241_17
• CRISPR_location: 5197427-5197520
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_17

Consensus_repeat	Method
TCTTCGTACAAAACTGGCTTCGGAAGC	CRISPRCasFinder

spacers of NZ_CP009241_17

>17.1|5197454|40|NZ_CP009241|CRISPRCasFinder
ATTCACCTTAAGTTTTGTGAGCATTTACTTCCTAGAAATT

CRISPR arrays and Neighbor proteins around NZ_CP009241_17

CRISPR arrays

The CRISPR arrays of NZ_CP009241_17

>merge|NZ_CP009241|17|5197427-5197520|CRISPRCasFinder
TCTTCGTACAAAACTGGCTTCGGAAGCATTCACCTTAAGTTTTGTGAGCATTTACTTCCTAGAAATTTCTTCGTACAAAACTGGCCTCGGAAGC

>NZ_CP009241|17|15|5197427-5197520|CRISPRCasFinder
TCTTCGTACAAAACTGGCTTCGGAAGC	ATTCACCTTAAGTTTTGTGAGCATTTACTTCCTAGAAATT
TCTTCGTACAAAACTGGCCTCGGAAGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038594507.1|5191448_5192417_-|heptaprenyl-diphosphate-synthase	unknown	unknown	gnl|CDD|131795
NZ_CP009241.1|WP_038594530.1|5202457_5202733_-|hypothetical-protein	unknown	unknown	gnl|CDD|372899
NZ_CP009241.1|WP_038594512.1|5193277_5193880_-|UbiX-family-flavin-prenyltransferase	unknown	unknown	gnl|CDD|180312
NZ_CP009241.1|WP_038594534.1|5203832_5204450_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY	unknown	unknown	gnl|CDD|237706
NZ_CP009241.1|WP_038594518.1|5195500_5196370_-|heptaprenyl-diphosphate-synthase-component-1	unknown	unknown	gnl|CDD|369311
NZ_CP009241.1|WP_038594527.1|5201422_5202040_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038600251.1|5200223_5200937_-|DUF3939-domain-containing-protein	unknown	unknown	gnl|CDD|289820
NZ_CP009241.1|WP_038594522.1|5197131_5197380_-|trp-RNA-binding-attenuation-protein-MtrB	unknown	unknown	gnl|CDD|376726
NZ_CP009241.1|WP_038594516.1|5194744_5195497_-|demethylmenaquinone-methyltransferase	unknown	unknown	gnl|CDD|234689
NZ_CP009241.1|WP_019909963.1|5197650_5197923_-|HU-family-DNA-binding-protein	unknown	unknown	gnl|CDD|259853
NZ_CP009241.1|WP_038594520.1|5196484_5197024_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038594505.1|5190882_5191326_-|nucleoside-diphosphate-kinase	unknown	unknown	gnl|CDD|179085
NZ_CP009241.1|WP_038594526.1|5201026_5201395_-|(2Fe-2S)-binding-protein	unknown	unknown	gnl|CDD|223706
NZ_CP009241.1|WP_038594528.1|5202116_5202296_-|DUF2768-family-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038594532.1|5202799_5203840_-|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|234629
NZ_CP009241.1|WP_038594514.1|5193876_5194752_-|UbiA-family-prenyltransferase	unknown	unknown	gnl|CDD|237247
NZ_CP009241.1|WP_038594536.1|5204462_5205788_-|ribosome-biogenesis-GTPase-Der	unknown	unknown	gnl|CDD|234628
NZ_CP009241.1|WP_038594524.1|5198299_5199778_-|stage-IV-sporulation-protein-A	unknown	unknown	gnl|CDD|378203
NZ_CP009241.1|WP_038594503.1|5190054_5190855_-|protein-glutamate-O-methyltransferase-CheR	unknown	unknown	gnl|CDD|224271
NZ_CP009241.1|WP_038594509.1|5192413_5193274_-|menaquinone-biosynthesis-protein	unknown	unknown	gnl|CDD|270352

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038594507.1|5191448_5192417_-|heptaprenyl-diphosphate-synthase	gnl|CDD|131795	TIGR02748, Heptaprenyl_diphosphate_synthase_component_2, heptaprenyl diphosphate synthase component II. Members of this family are component II of the heterodimeric heptaprenyl diphosphate synthase. The trusted cutoff was set such that all members identified are encoded near to a recognizable gene for component I (in pfam07307). This enzyme acts in menaquinone-7 isoprenoid side chain biosynthesis. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	1.36804e-145
NZ_CP009241.1|WP_038594530.1|5202457_5202733_-|hypothetical-protein	gnl|CDD|372899	pfam14069, SpoVIF, Stage VI sporulation protein F. The sporulation-specific SpoVIF (YjcC) protein of Bacillus subtilis is essential for the development of heat-resistant spores. Its expression is governed by SigK.	6.28653e-13
NZ_CP009241.1|WP_038594512.1|5193277_5193880_-|UbiX-family-flavin-prenyltransferase	gnl|CDD|180312	PRK05920, PRK05920, aromatic acid decarboxylase; Validated.	1.10282e-105
NZ_CP009241.1|WP_038594534.1|5203832_5204450_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY	gnl|CDD|237706	PRK14405, PRK14405, membrane protein; Provisional.	2.22005e-92
NZ_CP009241.1|WP_038594518.1|5195500_5196370_-|heptaprenyl-diphosphate-synthase-component-1	gnl|CDD|369311	pfam07307, HEPPP_synt_1, Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1. This family contains subunit 1 of bacterial heptaprenyl diphosphate synthase (HEPPP synthase) (EC:2.5.1.30) (approximately 230 residues long). The enzyme consists of two subunits, both of which are required for catalysis of heptaprenyl diphosphate synthesis.	6.31407e-20
NZ_CP009241.1|WP_038594526.1|5201026_5201395_-|(2Fe-2S)-binding-protein	gnl|CDD|223706	COG0633, Fdx, Ferredoxin [Energy production and conversion].	3.26742e-12
NZ_CP009241.1|WP_038594522.1|5197131_5197380_-|trp-RNA-binding-attenuation-protein-MtrB	gnl|CDD|376726	pfam02081, TrpBP, Tryptophan RNA-binding attenuator protein.	5.77036e-43
NZ_CP009241.1|WP_038594516.1|5194744_5195497_-|demethylmenaquinone-methyltransferase	gnl|CDD|234689	PRK00216, ubiE, bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE.	3.3763e-123
NZ_CP009241.1|WP_019909963.1|5197650_5197923_-|HU-family-DNA-binding-protein	gnl|CDD|259853	cd13831, HU, histone-like DNA-binding protein HU. This subfamily includes HU and HU-like domains. HU is a conserved nucleoid-associated protein (NAP) which binds non-specifically to duplex DNA with a particular preference for targeting nicked and bent DNA. It is highly basic and contributes to chromosomal compaction and maintenance of negative supercoiling, thus often referred to as histone-like protein. HU can induce DNA bends, condense DNA in a fiber and also interact with single stranded DNA. It contains two homologous subunits, alpha and beta, typically forming homodimers (alpha-alpha and beta-beta), except in E. coli and other enterobacteria, which form heterodimers (alpha-beta). In E. coli, HU binds uniformly to the chromosome, with a preference for damaged or distorted DNA structures and can introduce negative supercoils into closed circular DNA in the presence of topoisomerase I. Anabaena HU (AHU) shows preference for A/T-rich region in the center of its DNA binding site.	8.77981e-46
NZ_CP009241.1|WP_038600251.1|5200223_5200937_-|DUF3939-domain-containing-protein	gnl|CDD|289820	pfam13075, DUF3939, Protein of unknown function (DUF3939). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 150 amino acids in length.	0.000183818
NZ_CP009241.1|WP_038594505.1|5190882_5191326_-|nucleoside-diphosphate-kinase	gnl|CDD|179085	PRK00668, ndk, mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-; Validated.	2.24037e-81
NZ_CP009241.1|WP_038594532.1|5202799_5203840_-|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl|CDD|234629	PRK00094, gpsA, NAD(P)H-dependent glycerol-3-phosphate dehydrogenase.	9.67408e-178
NZ_CP009241.1|WP_038594514.1|5193876_5194752_-|UbiA-family-prenyltransferase	gnl|CDD|237247	PRK12886, ubiA, prenyltransferase; Reviewed.	1.63911e-105
NZ_CP009241.1|WP_038594536.1|5204462_5205788_-|ribosome-biogenesis-GTPase-Der	gnl|CDD|234628	PRK00093, PRK00093, GTP-binding protein Der; Reviewed.	0
NZ_CP009241.1|WP_038594524.1|5198299_5199778_-|stage-IV-sporulation-protein-A	gnl|CDD|378203	pfam09547, Spore_IV_A, Stage IV sporulation protein A (spore_IV_A). SpoIVA is designated stage IV sporulation protein A. It acts in the mother cell compartment and plays a role in spore coat morphogenesis. A comparative genome analysis of all sequenced genomes of Firmicutes shows that the proteins are strictly conserved among the sub-set of endospore-forming species.	0
NZ_CP009241.1|WP_038594503.1|5190054_5190855_-|protein-glutamate-O-methyltransferase-CheR	gnl|CDD|224271	COG1352, CheR, Methylase of chemotaxis methyl-accepting proteins [Cell motility and secretion / Signal transduction mechanisms].	2.24312e-89
NZ_CP009241.1|WP_038594509.1|5192413_5193274_-|menaquinone-biosynthesis-protein	gnl|CDD|270352	cd13634, PBP2_Sco4506, The conserved hypothetical protein SCO4506 exhibits the type 2 periplasmic-binidng protein fold. This group includes the SCO4506 protein from Streptomyces coelicolor and related hypothetical proteins. SCO4506 is an ortholog of Ttha1568 (MqnD) from Thermus thermophilies HB8. MqnD is an enzyme within an alternative menaquinone biosynthetic pathway that catalyzes the conversion of cyclic de-hypoxanthine futalosine to 1,4-dihydroxy-6-naphthoate. Menaquinone (MK; vitamin K) is an essential lipid-soluble carrier that shuttles electrons between membrane-bound protein complexes in the electron transport chain. SCO4506 has significant structural homology with the members of type 2 periplasmic-binding fold protein superfamily. The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.34306e-118

Protein sequences

>NZ_CP009241.1|WP_038594522.1|5197131_5197380_-|trp-RNA-binding-attenuation-protein-MtrB
MTEKNNGVSPAPSGSEYIVVKAKENGVQVIGLTRGLDTRFHHTEKLDKGEVLIAQFTDHTSAMKIRGKAEIWSKHGQLESES
>NZ_CP009241.1|WP_038594520.1|5196484_5197024_-|hypothetical-protein
MNRGWLIGTVLLVTTASAVILPQLAELEPSLQRQQGVVETFSGANTILDNDNLVDILNGIPFTLSIDSVDFDQSVLSLDLKVTGNNHEPKELYQNMAQAISFAFRDTENVDQLLLRIVAEDKWLDTRRLLLAGDIRRMEWSLQLQQKLEASGNDPLPDTLKKGFRIRESELWKRQFIYP
>NZ_CP009241.1|WP_038594518.1|5195500_5196370_-|heptaprenyl-diphosphate-synthase-component-1
MKPYRIPQLAKPYTDYDMIQRHTELPPFSDGRGHLLYIFLNHSTPDGAQNGELYTLVTALVQLGLDTHESIDISLEEPGGDQMRSRQLKVLAGDYFSSWFYHLLAKREQIEMVGILSTAIADFNVMKAHLYGKMKGMLLSAEQYLRHTVQLNMRLFLSFTPMIEESLTQLWEKLLAEFSHCETLCLELRRSGNPASAREGYCYWKVMELATEEERQLLDEQNLDLKDWKKLKLKYKCDSLLTDKLHGSLQSIQGLLKDIKDEHLISELSSALDHFLLQTKISGQAAVEG
>NZ_CP009241.1|WP_038594516.1|5194744_5195497_-|demethylmenaquinone-methyltransferase
MTIEKTSALGDQGVKPKEQFVHSVFESIAGKYDLMNDILSFRRHKAWRKFTMRKMGMKRGDSAVDLCCGTCDWSIALADASQTGSVIGLDFSAGMLEVGRRKVEERKLQDRISLVQGNAMDLPFGDNSFDYATIGFGLRNVPDLVQVLNEMKRVVKPGGMVVCLELSKPMKQPFKGIYYFYFQRVLPLLGKLFAKRYEQYKWLPESLALFPDREQLAVIFRETGLEQVESYPLTGGIAALHIGLKENCNV
>NZ_CP009241.1|WP_038594514.1|5193876_5194752_-|UbiA-family-prenyltransferase
MFKKVGVFLQMIKFEHTVFALPFAFMGALLGSVVMFGTLPSWAQIGWVVIAMFGARSAAMGLNRLIDRISDAKNPRTAGRAIPAGLLKVGEVIIFIAISFFLLFWAAFKLNPLSAKLLPIAVFLLVFYSFTKRFTWACHLILGLTIALAPLGGWVAVTGTVDWTAMIFYFTIVFWTAGFDIIYSCQDVEFDTKEGLYSIPVRFGVPRALDIAKVFHFLTGIGFVSLLFITDLSWWYVAGMLIAYIILFYEHHIVSPSDLSRLQTAFFTMNGVLSIVVFSFTLIDLVVQFYK
>NZ_CP009241.1|WP_038594512.1|5193277_5193880_-|UbiX-family-flavin-prenyltransferase
MTEQKPKNFVVGITGASGGIYGVRLTETLLSLGYTVHLVVSNAGWRVFKEELGFAASDREGFLNEKFSGYPGSLLYHKVQDIGASIASGSFRTEGMIIMPCSMGTLSAVAHGSSDNLMTRAADVMLKEGRPLVLVPRETPLHAIHLENMLKLSRLGVKLIPAMPAFYFGPVSMDDLINFMVGKVLDSFNIEHTLFRRWGE
>NZ_CP009241.1|WP_038594509.1|5192413_5193274_-|menaquinone-biosynthesis-protein
MVNSQHTVIGKISYTNSWPVFHNFHPSSLSYPAEMVSEVPAILNQGMAEGTIHVGALSSFAYAAASDRLLLLPDLSVSSEGPVKSILLFSRMPVQQLGNARIAVTNTSATSVNLLKILMEKAVHGKPEYISAEPDLDHMMDQADACLLIGDNAIKASWQNQGYIVTDLGELWNEWTGLSMTFAVWAVNREAANSKPKAIAEIAEAFAESKRRGIRELAPVIREACMAIGGTAAYWEGYFRNLCYDFGERQQEGLNLYFRYAYEMGLLPQEVKMELWSHNLLTRVKE
>NZ_CP009241.1|WP_038594507.1|5191448_5192417_-|heptaprenyl-diphosphate-synthase
MKRMQIFGLLNKDMDLIEKELYRSVQGDDGLLTETSLHLLKAGGKRLRPVFVLMGGKFGQYDLEKLKRVAIPLELIHSASLVHDDVIDDAELRRGELTVKAKWGDKIAMYTGDYIYAKALVMTSELKNPRIHQILSKAMVEMSIGEMEQIRDFFNSEQSVRHYLRRIRRKTALLIAISCQLGALAADAEPETARLLYNYGYNVGMAFQIRDDLLDLSGTEKQIGKPPGSDMRQGNITLPVIYSLEDDRLRDSLLEELKLIREGQRSVGRAIDLILSGEGIARAEELASRYIAKALAALDELPNNKTKRNLRDIAFFVTGRAY
>NZ_CP009241.1|WP_038594505.1|5190882_5191326_-|nucleoside-diphosphate-kinase
MEKTYLMIKPDGVQRGLIGRIVARLEDKGFKLIAAKLITVTEAQAKKHYAEHEGKDFFPELVGFITSGPVFAMVWEGDDVVALSRLLIGKTKVGEALPGTIRGDFASHTPLNLIHGSDSPESAEREISNFFAPNELAHYNKDIQAWM
>NZ_CP009241.1|WP_038594503.1|5190054_5190855_-|protein-glutamate-O-methyltransferase-CheR
MAEREQIEAADPDYTGFIHNVKQSTGIDLAQYKEAQMKRRLTTLRMKNGYHSFQDFYAAMMKDKALFYEFLDRMTINVSEFWRNPNRWEVLRDVILPDLQRSGRRLKLWSAACSTGEEPYTLAMILSDKNLLSQTGILATDIDDGALAKAKQGLYLERSLKDVPKDVAARYFAPEGPVFKVSESLKKSIDFRKQNLLLDKFDEGFDLIICRNVMIYFTEEAKNKLYHKFSDSLRPGGYLFVGSTEQIFTPAQYGFESTETFFYRKK
>NZ_CP009241.1|WP_019909963.1|5197650_5197923_-|HU-family-DNA-binding-protein
MNKSDLINVVTEATELPKKDATKAVDAVFEAITGALQSGDKVQLVGFGNFEVRERSARKGRNPQTGEEIEIPSSKVPAFKPGKALKDGIK
>NZ_CP009241.1|WP_038594524.1|5198299_5199778_-|stage-IV-sporulation-protein-A
MEKVDIFKDIAERTGGDIYLGVVGAVRTGKSTFIKRFMETIVLPNITSEADRVRAVDELPQSAAGKTIMTTEPKFVPNNAVQIKVAEGLEVNVRLVDCVGYAVEGAKGYEDENGPRMISTPWFEEPIPFQEAAEIGTRKVIQEHSTLGVVVTTDGTIAEIPRNSYIDSEERVIAELKEVGKPFVLVINSTRPRSEEAQQLRSELALKYDIPVMTLSAANMTEDDVTGVLREVLYEFPVHEVNVNLPSWVMVLGENHWLRSSYENSVRDTVKDIRRLRDVDRLVSQFTEYDFIDKAGLSGMNMGQGVAEIDLYAPEELYDQVLMEVVGVEIRGKDHLLQLMQDFSHAKREYDRFSEALEMVKTTGYGIAAPSLAEMALDEPELIRQGSRFGVRLKATAPSIHMIRVDVESEFSPIIGTEKQSEELVRYLMQDFENDPIKIWESDIFGRSLHSIVREGIQGKIAMMPDNARYKLQETLGRIINEGSGGLIAIIL
>NZ_CP009241.1|WP_038600251.1|5200223_5200937_-|DUF3939-domain-containing-protein
MGLLLGISLLLFVLTGCMYRGEQNQPAGNFRESVKRVQAAVDDYQQEEGLLPILNSEESTPRYEKFVIDLEKLRQKGYLDEIPAAAFEKGGSAYFLILDEESDPTVKLMDLVTVQKVNDVSRQVNRYKSAHGGALPAGEERYPGFFTIDSKKAGTASITLKSVYSGQPLEFIMDKNGDVYVDYSFDIMSAIGKEGATPAANQDLRIELEQASYYVPVKSLPYLWINGQPVPQPPDSP
>NZ_CP009241.1|WP_038594526.1|5201026_5201395_-|(2Fe-2S)-binding-protein
MKPQKGWTVTFQPEGRKTVVQHGVTLLEAARKAGVVLPTRCGGKAGCLMCKVTVPQEEAAALRPPGDAEQRKLGGLLDSGVRLACQAAVWNDLSVEVPEDPLKAAVRRRLEAARRGEEDGLW
>NZ_CP009241.1|WP_038594527.1|5201422_5202040_-|hypothetical-protein
MADSGIPYILEALASICEVLSLSWLEKPPVWLLGGSCGLLLHGVQLSAPPRDIDLYADLEDAEVLHSALSGYSVDGGPEEDYSGGCYSLRSRYRIGAARVELVCGFQIGSGTRRYAVDVQQLLPHALIQDFNGIGLMRLMPAAHELVFNLLRCRGERCSAIANFMKVNLAGHIPLLQQLVLENGLDEAFGLQLEKLLGVSTSIQI
>NZ_CP009241.1|WP_038594528.1|5202116_5202296_-|DUF2768-family-protein
MDPMTKMWLSLIAILVMGLSVFLITFARSKTKGLLRAILSIVAFVIMLIGLLGGAASIM
>NZ_CP009241.1|WP_038594530.1|5202457_5202733_-|hypothetical-protein
MSKDFSKDALNAINKKAGKNITPGAVQKLASTVKPGTMQNEAQLRQLIKQVSSMAKVPVSEATVQDIINAVKKGGANSGTMESLMKMMLKK
>NZ_CP009241.1|WP_038594532.1|5202799_5203840_-|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MSDKVTVLVAGSWGTALATVLAANHSEVYLWTRRSEQAAEINEAHTNEHFLPGISLPANIIATTDMETAVTGSKAVVIVAPSSGMRQVARSLKPFWKEDMLCVHATKGFETESMKRMSTVISEELGCDEGQVVVLSGPSHAEEVVRLCPTTVVVASPDDRRATEAQSLFINNDFRVYTNRDQVGVELAGALKNIIALGAGLSDGLGFGDNAKAALLTRGLAEISRVGVELGANPLTFAGLAGLGDLVVTATSQHSRNWRAGSLLGQGKPLSEVLESMGMVVEGIRTTEAAYAISLKLGVQMPITDQIYHVLFKGKTPRSAVEALMGRDRKTEMETISQETWEQWHS
>NZ_CP009241.1|WP_038594534.1|5203832_5204450_-|glycerol-3-phosphate-1-O-acyltransferase-PlsY
MAFELLVIVVSYLLGSVSFSVLLARLLKGIDIRQYGSGNAGATNTLRVMGKGPAILVLVLDVLKGIAAVWLGTWAGGWGTWIAVACGVAAIIGHNWPLYFHFRGGKGIATTIGVMATLCFWPALIAGIIAILAIVITRFVSLGSLIFVALTPVFLLFTEFTTPELWGSLIIAVFAFWRHRSNIVKISQGRENKIGAKVKEGNRVV
>NZ_CP009241.1|WP_038594536.1|5204462_5205788_-|ribosome-biogenesis-GTPase-Der
MARPVVAIVGRPNVGKSTIFNRLIGDRLAIVEDKPGITRDRIYGVSDWNGKSFSVIDTGGIEIDGEDAILKSIRVQAELAIEEADVIVFMCEAKSGLTNSDEEVAQILFRSGKPIVLAINKVDNMKRTDDIYEFYTLGIGDPIGISGSHGTGIGDLLDAVTEKLPEPTEEEYDEDVIRVALIGRPNVGKSSLVNAILGEERVIVSDVAGTTRDAIDTPFERDGQRYVLIDTAGMRKRGKVYETTEKYSVMRAMRAIERADVVLVVINGEEGIIDQDKHIAGYAHDAGKASIFVVNKWDAVEKDDKTMQNFETKIRDHFLFMSYAPVVFLSALTKQRLQKLLPVVQHVAQQHALRITTHLVNDVVSDAVAINPPPTDKGRRLRINYVTQVAVKPPTIVVFVNDPSLMHFSYERYLENKIRAAFNFEGTPIRLFTRRKSENEG

Crispr_ID: NZ_CP009241_18

• CRISPR_ID: NZ_CP009241_18
• CRISPR_location: 5261133-5261237
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_18

Consensus_repeat	Method
GTTGGACTGCCGCCAGGTGCTACTGTC	CRISPRCasFinder

spacers of NZ_CP009241_18

>18.1|5261160|51|NZ_CP009241|CRISPRCasFinder
TGTATTGGTGTTGGTGTTGGTGATGGTGTTGTTTCCGTCGTCGGTACTGGT

CRISPR arrays and Neighbor proteins around NZ_CP009241_18

CRISPR arrays

The CRISPR arrays of NZ_CP009241_18

>merge|NZ_CP009241|18|5261133-5261237|CRISPRCasFinder
GTTGGACTGCCGCCAGGTGCTACTGTCTGTATTGGTGTTGGTGTTGGTGATGGTGTTGTTTCCGTCGTCGGTACTGGTGTTGGACTGCCGCCAGGCGCTACTGTC

>NZ_CP009241|18|16|5261133-5261237|CRISPRCasFinder
GTTGGACTGCCGCCAGGTGCTACTGTC	TGTATTGGTGTTGGTGTTGGTGATGGTGTTGTTTCCGTCGTCGGTACTGGT
GTTGGACTGCCGCCAGGCGCTACTGTC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038594620.1|5266182_5267517_-|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|143501
NZ_CP009241.1|WP_081966226.1|5267710_5269402_-|spore-germination-protein	unknown	unknown	gnl|CDD|377020
NZ_CP009241.1|WP_038594605.1|5250699_5251386_-|DUF2953-domain-containing-protein	unknown	unknown	gnl|CDD|378578
NZ_CP009241.1|WP_052092204.1|5253573_5254827_-|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II	unknown	unknown	gnl|CDD|181774
NZ_CP009241.1|WP_038594612.1|5257225_5257624_-|large-conductance-mechanosensitive-channel-protein-MscL	unknown	unknown	gnl|CDD|234795
NZ_CP009241.1|WP_081965891.1|5259235_5260711_+|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl|CDD|377924
NZ_CP009241.1|WP_038594611.1|5255630_5256731_-|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	unknown	unknown	gnl|CDD|273015
NZ_CP009241.1|WP_038594618.1|5265609_5266041_-|peptidylprolyl-isomerase	unknown	unknown	gnl|CDD|223725
NZ_CP009241.1|WP_038594626.1|5272338_5273292_-|DMT-family-transporter	unknown	unknown	gnl|CDD|307170
NZ_CP009241.1|WP_038594613.1|5257817_5259182_+|MBOAT-family-protein	unknown	unknown	gnl|CDD|224610
NZ_CP009241.1|WP_038594622.1|5270790_5271216_-|stage-V-sporulation-protein-AB	unknown	unknown	gnl|CDD|379365
NZ_CP009241.1|WP_038594609.1|5252133_5252925_-|segregation/condensation-protein-A	unknown	unknown	gnl|CDD|234635
NZ_CP009241.1|WP_038594632.1|5276614_5277769_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|279875
NZ_CP009241.1|WP_038594610.1|5254889_5255558_-|riboflavin-synthase	unknown	unknown	gnl|CDD|236455
NZ_CP009241.1|WP_038594628.1|5273777_5274950_+|membrane-protein	unknown	unknown	gnl|CDD|270371
NZ_CP009241.1|WP_038594616.1|5264670_5265426_+|TIGR02206-family-membrane-protein	unknown	unknown	gnl|CDD|131261
NZ_CP009241.1|WP_038594607.1|5251547_5252165_-|SMC-Scp-complex-subunit-ScpB	unknown	unknown	gnl|CDD|234657
NZ_CP009241.1|WP_038600255.1|5253066_5253534_-|6,7-dimethyl-8-ribityllumazine-synthase	unknown	unknown	gnl|CDD|234606
NZ_CP009241.1|WP_038594624.1|5271212_5271875_-|stage-V-sporulation-protein-AA	unknown	unknown	gnl|CDD|378824
NZ_CP009241.1|WP_038594630.1|5275082_5276594_-|carboxylesterase/lipase-family-protein	unknown	unknown	gnl|CDD|225181

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038594620.1|5266182_5267517_-|diaminopimelate-decarboxylase	gnl|CDD|143501	cd06828, PLPDE_III_DapDC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Diaminopimelate Decarboxylase. Diaminopimelate decarboxylase (DapDC, EC 4.1.1.20) participates in the last step of lysine biosynthesis. It converts meso-2,6-diaminoheptanedioate to L-lysine. It is a fold type III PLP-dependent enzyme that contains an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. DapDC exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity.	1.18414e-180
NZ_CP009241.1|WP_081966226.1|5267710_5269402_-|spore-germination-protein	gnl|CDD|377020	pfam03323, GerA, Bacillus/Clostridium GerA spore germination protein.	0
NZ_CP009241.1|WP_038594605.1|5250699_5251386_-|DUF2953-domain-containing-protein	gnl|CDD|378578	pfam11167, DUF2953, Protein of unknown function (DUF2953). This family of proteins has no known function.	2.53511e-07
NZ_CP009241.1|WP_052092204.1|5253573_5254827_-|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II	gnl|CDD|181774	PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II.	0
NZ_CP009241.1|WP_038594612.1|5257225_5257624_-|large-conductance-mechanosensitive-channel-protein-MscL	gnl|CDD|234795	PRK00567, mscL, large-conductance mechanosensitive channel protein MscL.	4.52682e-55
NZ_CP009241.1|WP_081965891.1|5259235_5260711_+|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl|CDD|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	1.27294e-21
NZ_CP009241.1|WP_038594611.1|5255630_5256731_-|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD	gnl|CDD|273015	TIGR00326, eubact_ribD, riboflavin biosynthesis protein RibD. This model describes the ribD protein as found in Escherichia coli. The N-terminal domain includes the conserved zinc-binding site region captured in the model dCMP_cyt_deam and shared by proteins such as cytosine deaminase, mammalian apolipoprotein B mRNA editing protein, blasticidin-S deaminase, and Bacillus subtilis competence protein comEB. The C-terminal domain is homologous to the full length of yeast HTP reductase, a protein required for riboflavin biosynthesis. A number of archaeal proteins believed related to riboflavin biosynthesis contain only this C-terminal domain and are not found as full-length matches to this model. [Biosynthesis of cofactors, prosthetic groups, and carriers, Riboflavin, FMN, and FAD].	1.14432e-120
NZ_CP009241.1|WP_038594618.1|5265609_5266041_-|peptidylprolyl-isomerase	gnl|CDD|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	4.19529e-60
NZ_CP009241.1|WP_038594626.1|5272338_5273292_-|DMT-family-transporter	gnl|CDD|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	1.45122e-08
NZ_CP009241.1|WP_038594613.1|5257817_5259182_+|MBOAT-family-protein	gnl|CDD|224610	COG1696, DltB, Predicted membrane protein involved in D-alanine export [Cell envelope biogenesis, outer membrane].	3.2245e-84
NZ_CP009241.1|WP_038594622.1|5270790_5271216_-|stage-V-sporulation-protein-AB	gnl|CDD|379365	pfam13782, SpoVAB, Stage V sporulation protein AB. This family of proteins is required for sporulation.	7.33124e-38
NZ_CP009241.1|WP_038594609.1|5252133_5252925_-|segregation/condensation-protein-A	gnl|CDD|234635	PRK00104, scpA, segregation and condensation protein A; Reviewed.	6.52171e-81
NZ_CP009241.1|WP_038594632.1|5276614_5277769_-|AI-2E-family-transporter	gnl|CDD|279875	pfam01594, AI-2E_transport, AI-2E family transporter. This family includes four different proteins from E. coli alone. One of them, YdgG or TqsA, has been shown to mediate transport of the quorum-sensing signal autoinducer 2 (AI-2). It is not clear if TqsA enhances secretion of AI-2 or inhibits AI-2 uptake. By altering the intracellular concentration of AI-2, TqsA affects gene expression in biofilms and biofilm formation. TsqA belongs to the AI-2 exporter (AI-2E) superfamily.	1.00877e-60
NZ_CP009241.1|WP_038594610.1|5254889_5255558_-|riboflavin-synthase	gnl|CDD|236455	PRK09289, PRK09289, riboflavin synthase.	7.89199e-98
NZ_CP009241.1|WP_038594628.1|5273777_5274950_+|membrane-protein	gnl|CDD|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.30959e-49
NZ_CP009241.1|WP_038594616.1|5264670_5265426_+|TIGR02206-family-membrane-protein	gnl|CDD|131261	TIGR02206, Uncharacterized_protein_TP_0381, conserved hypothetical integral membrane protein TIGR02206. This model represents a family of hydrophobic proteins with seven predicted transmembrane alpha helices. Members are found in Bacillus subtilis (ywaF), TP0381 from Treponema pallidum (TP0381), Streptococcus pyogenes, Rhodococcus erythropolis, etc.	7.19333e-50
NZ_CP009241.1|WP_038594607.1|5251547_5252165_-|SMC-Scp-complex-subunit-ScpB	gnl|CDD|234657	PRK00135, scpB, segregation and condensation protein B; Reviewed.	5.06782e-76
NZ_CP009241.1|WP_038600255.1|5253066_5253534_-|6,7-dimethyl-8-ribityllumazine-synthase	gnl|CDD|234606	PRK00061, ribH, 6,7-dimethyl-8-ribityllumazine synthase; Provisional.	8.00059e-90
NZ_CP009241.1|WP_038594624.1|5271212_5271875_-|stage-V-sporulation-protein-AA	gnl|CDD|378824	pfam12164, SporV_AA, Stage V sporulation protein AA. This domain family is found in bacteria - primarily Firmicutes, and is approximately 90 amino acids in length. There is a single completely conserved residue G that may be functionally important. Most annotation associated with this domain suggests that it is involved in the fifth stage of sporulation, however there is little publication to back this up.	2.94326e-15
NZ_CP009241.1|WP_038594630.1|5275082_5276594_-|carboxylesterase/lipase-family-protein	gnl|CDD|225181	COG2272, PnbA, Carboxylesterase type B [Lipid metabolism].	2.72459e-156

Protein sequences

>NZ_CP009241.1|WP_081965891.1|5259235_5260711_+|copper-amine-oxidase-N-terminal-domain-containing-protein
MMSVPHIQIAKTPAQPRGLHARSKKMMTLFLLFLFSFAALAALLTIFLDPLQFYHKSSWYTPVFSQEERYQNPGLAKNYDYNNIIIGTSMTENFLPSQVDKTLGGTTMKLSMEGSTVDEHYKIAKLALGTGKVKQVLWGLDYFSLKLETTKAAKEFPDYLYDGKLWTDYKYWFNSSVYTQLFWPSLKSTLTGEPGKKLEYLNNWNGVVKFGQQYVTKAYLKASGNELYFGLNEENTDQLQAHFNTYILPLLKEYPDVQFYFYYPPYSVMRQVAWNSDNPIRFGNQLVMRKWMYEQFRQFDNVSLYDFQAESKWTFNLDLYKDLSHHSEEVNSWIAEAIGEKNPDYLVTDENIDEFNNKLQSQAESAVTDLSGNLYQSSVQFGGVQLGYTTRLIQGDKELWLTAKDLGPALGAKVEWDGTSKTVTLTSGGHSIAMTVGSSKALVDGTSTDLEAAPLLVGGKVLIPLAFTAEQLGWDVTTDNKGNWIRYSLTP
>NZ_CP009241.1|WP_038594613.1|5257817_5259182_+|MBOAT-family-protein
MLFNSYIFMFGFLPVVLAGYFALNRIRLFKYAKLWLALSSLVFYGWWNIRYIPLILLSILFNYTLGWYIHSGKSRPRTLLIFGLSANLLLLGYYKYADFFITNWNGLTGWNAAPLHLLLPLGISFFTFTQIAYLVDTYRHQAREYGLVNYILFVTFFPHLIAGPILHHKEMMPQFDRLRGKLWNWNNVLKGTLLFSIGLGKKVIIADTLAGFANNGFTSAAHFVDSWVAVLSYTLQLYFDFSGYTDMAIGIALLFNIVLPQNFNAPYRALSIRDFWRRWHMTLSRFLRDYIYIPFGGNRKGFWISIRNVIITFLLGGIWHGAGWMFVLWGLLHGVGQAVEKLWARRGTPLPKGIAWLLTFAFINVTWVFFRAENLTIAFRLLKGMSGINGLGTSAVSGLKWAIVLIVILLGVILLRHKTEIQVRSWKTVMAMALIFVISLFFFNRITPFLYFNF
>NZ_CP009241.1|WP_038594612.1|5257225_5257624_-|large-conductance-mechanosensitive-channel-protein-MscL
MWKEFKSFAMKGNVLDLAVAVIIGAAFGKIVTSLVADIIMPLVGMLSGGIDPLKKLSFTFREATVNYGLFLQAVVDFFIISFSIFLVIKLVGKFKRKEVVKVEVVETPAPDPEIALLTEIRDLLRAEKQSEI
>NZ_CP009241.1|WP_038594611.1|5255630_5256731_-|bifunctional-diaminohydroxyphosphoribosylaminopyrimidine-deaminase/5-amino-6-(5-phosphoribosylamino)uracil-reductase-RibD
MDTMNDQFYMALALDMAERAQGQTGINPVVGCVVVKDGAVIGLGTHLQRGTGHAEVHALNMAAGKAQGSTAYVTLEPCSHYGKTPPCSQRLIDEGVARVVVACEDPNPQVAGRGIAMLRDQGIEVEVGLLRSRALRLNEKFIKYILTKQPFVTLKSASTLDGKISTRTGDSKWISNGQAREIVHTLRHRHQGIMVGVNTVIADNPSLTTRMVVPGLNPVRIVIDSSLRIPLDSAVVTDGQAPTVVVTTEAADPVKHEALVAAGVQVIICGTGPRVDLQSAMTKLGEMEIGSILLEGGGTLNGSMLEGGLVDRVVLFFAPKIVGGGAGAAGTFEFPGVGLMKDAITLEGLEVEVLGDNVCISGTPIR
>NZ_CP009241.1|WP_038594610.1|5254889_5255558_-|riboflavin-synthase
MFTGLIEEIGVLRSVSSGGEMMVLNIGASLIMDDLKIGDSVSVNGVCLTATSLGDHYFTVDVMPQTYRNSNLKELRTGGKMNLERAMAAGGRFGGHIVQGHVDGTGEIRSVKRDQNAVVFEIAPDRKSLFKYIIPKGSITIDGISLTVVNTTAAAFTVSIIPHTLGETVLTHKRSGDSINIECDVLGKYVDHLLHYSAGAGHEEDENSSRISRDFLAANGFV
>NZ_CP009241.1|WP_052092204.1|5253573_5254827_-|bifunctional-3,4-dihydroxy-2-butanone-4-phosphate-synthase/GTP-cyclohydrolase-II
MSQEPKQDSVLDPIEDAIYDLMRGKVIIVVDDEDRENEGDFIALAERATPEVINFMIKEGRGLVCLPITAERAEELDLQPMVSQNTDNHGTAFTVSIDHKDTTTGISAGERSMTIKAIMDPNAKPSDFRRPGHMFPLIAKKGGVLRRSGHTEAAVDLARMCGAYPASVICEVVKEDGEMARLPDLIEIAKKHDLKLISIKDLIHYRNEKEHLVTREVSVNLPTDFGLFQTIAYTNEVDDKEHVALVKGDISGEEPVLVRVHSECLTGDVFHSHRCDCGPQFEAALRQIEAAGRGVLLYMRQEGRGIGLINKLRAYKLQEEGLDTVDANLKLGFPADLRDYGIGAQILKDLGVRQIKLLTNNPRKIKGLEGYGLEVVERVPIQMPENKDNTNYLHTKQAKLGHLLTFDNIEQNEDSKI
>NZ_CP009241.1|WP_038600255.1|5253066_5253534_-|6,7-dimethyl-8-ribityllumazine-synthase
MPNYFEGHLVSEGLKYGVVVGRFNEFITSKLLSGALDAFKRHGVADEEVDVAWVPGVFEIPLICQKMAESGKYDAVIALGTVIRGSTTHYDYVCNEVAKGVAAINLKTGIPTIFGVVTTENIEQAIERSGTKAGNKGWDAATSAIEMANLNKLFK
>NZ_CP009241.1|WP_038594609.1|5252133_5252925_-|segregation/condensation-protein-A
MTVLYKLETFEGPLDLLLHLIDKAEIDIQDIPVSVITEQYMDYLQTMQELELDITSEFLVMAATLLSIKSKLLLPKPPVIEIEDFDYYEDDGYDPRAELVQRLIEYRKFKNIAVQLLDMESERSLIFTKEPEDLGPFVPTQIDNTLKGLHTSDLIAAFRKALSKAARRSSYQRITRDEISVKDRIRDVSEALQRKGVGGRLRFSALLHDEMARHEIVTTFLAILELMKMKAIYCYQEKLFEDIVMEWRGGEEFSGLQNAEIDY
>NZ_CP009241.1|WP_038594607.1|5251547_5252165_-|SMC-Scp-complex-subunit-ScpB
MDYKTLKSIIEGLLFLSGDEGLSARQIAEITEQRPDLATSALEELKDDYINQGRGLQVVQIAGNYRLATLPEHAAYFERLAYSPSRSSLSQAALETLAIVAYRQPITRVEIEEIRGVKSERAIHTLNNKDLIHEVGRAEAVGRPILYGTTKSFLDSFGLASLKELPEPSNFDNSDGLEEETQLLFSKLDSQMTFDDVEQPQGIEE
>NZ_CP009241.1|WP_038594605.1|5250699_5251386_-|DUF2953-domain-containing-protein
MTLWLVIPLALLLVVIVLVLSSSIHFHFRLCRLGKDDRVEFDIKALFGLVKFHYELPALVYEGMERGVRVKLEESGIAPVKKDADKEEQIDKEAVSGWIDNLKAALRATRGLNKWLKGLMAHVKISKLDWSTDFSLGDAAYTATAAGALWGMKWSLIGWVSQFVRLQHAPRLFVAPVFRDELCYSTEAVCAGKLSLAYTLYAGILLLRRITKVKGGLARWKQLLSHKQ
>NZ_CP009241.1|WP_038594616.1|5264670_5265426_+|TIGR02206-family-membrane-protein
MNFDSFFARRHETDFSMFSPSHWAALAVVALVCLVLFWSRFALRSRPSIRRFVKLLLVFVLLFSEAGLHVWYFSQGIWKKESSLPLELCGITLLLSVIMLLTRSRRLYSFLYFAGIGGAFIALLTPNLVYPYPHFRFLLFFTAHGAIILASLYMTWVEGYRPTWRSLFFTMLCLNLVAACVYAANSLLGSNYMFLAHKPGTFSVLDYFGPYPYYLLVEEGFAFILFLLMYLIFFRLPQRSALRDRRRSRIL
>NZ_CP009241.1|WP_038594618.1|5265609_5266041_-|peptidylprolyl-isomerase
MAKQAKITLENGGVVLLDLFDQDAPNTVANFEKLAKDGFYNGLVFHRVIPGFVAQGGCPNGSGSGGPGYTINCEINPNKHERGTLAMAHAGKNTGGSQFYICYAPQPHLDGVHTVFGKVVEGMDYVDSFQGRDKMTSVEIIEA
>NZ_CP009241.1|WP_038594620.1|5266182_5267517_-|diaminopimelate-decarboxylase
MFLHGTSRINDAGHLEIGGCDVTELKAEYGTPLYIMDEQLVRRRCREYMDAFTASGLEFQVAYASKAFSVMAMCRLVDEEGLSLDVVSDGELYTALQAGFPAERIHFHGNNKTPDEIEMAIDAGIGCFVVDNLVELSLLQSIASRKEVKVNILLRVTPGVEAHAHHAYASTGQTDSKFGFDIGNGSAQEAVSQASDKANLQLLGVHSHIGSQIFETEGFQLAVERIADFTRKVKEELAIDFPVVNLGGGFGIRYVDGDTPLLVSEYVAAITDAVKTHFAGIGGKLPQIWVEPGRSIVGDAGTTLYTVGTNKEIPGVRKYVAVDGGMTDNPRPALYESKYEALLANRATESNEETVSIAGKCCESGDMLIWDVELPKVESGDLLAVACTGAYNYSMASNYNRIRRPAVVFVQNGQSDVVVRRESHQDITANDIVPERIAKQAVAK
>NZ_CP009241.1|WP_081966226.1|5267710_5269402_-|spore-germination-protein
MGSQAGAGTTAEAGSGQQSQAQNQQPQKSKKDKKKAKQEDAPHQGKIDPLQLKRDNERSDSLEESIIYWQGNDKVSPNLEHTKNTLTEVMGLGSSFDIVFREMSFAGRKAALLCISGFAKDTIIDEILKRLTYLTPENVSTDVLASFMTEYIPHVQVEKGELLSESINKVLSGMSVFFIEGETQVIIMDTRSYPSRNPDEPSIERVVRGSRDGFTETLLSNVALVRRRIRDPGLKYEMHQVGRRTRTDVCVAYIDDIVDKTQVKAVTDKINSVDIDGIPLADKQLEEAIVGRGWNPYPLVRYSERPDTVASHLLEGRVVIFVDTSPSVIVLPTTFFDLCQHAEENRQTPFMGTYLRWVRFIGIFASMFLLPLWMLMVIHPELLPKMLDFIGPQKTAKIPLLAQFLIVELGVDLLRMAAVHTPTPLGSAMGLIAAILVGDIAVKTGLFVNEVVLYMAIASIGMFATPSYELGLANRIVRLVLLVAVAAFQVQGFMIGTTLIIVLLTLHRSYNSSYLWPFIPFNAKAMGEIILRQPVLSSKTRPSFNKTRDNTRMPPVQENEKQS
>NZ_CP009241.1|WP_038594622.1|5270790_5271216_-|stage-V-sporulation-protein-AB
MTAPITLGLNLLLGIAGGIAVGGGVIALFIVLDMVPRLAQLTSSYDKVHWYEGAMIGGSLLGTMSDFWNWRISSGPVVELGVGLFDGIFVGMLAAALTEVLNVLPILAKRLQMTHYLFGLLMAMVCGKVAGSLFDFFVYQQ
>NZ_CP009241.1|WP_038594624.1|5271212_5271875_-|stage-V-sporulation-protein-AA
MNTYSAPAIYIQLKNRVTVPKGKGVTLRDIAYLITEPEWREPLYSILLLKPAQSDGNLILIDLLTVIPHIHELIPGADIQPIGEGRTIVQIEGLVEARKPSVALFVLVWLLLFFGSALTIMNFHADVSMQEVHVRIVEMLTGRRDDHPYVFQIAYSLGIGFGMVIFFNHLFKKKWNEEPTPLEVEMFLYQKNIDHYVVHEEYSKMNRSGNDPSGPKEDGT
>NZ_CP009241.1|WP_038594626.1|5272338_5273292_-|DMT-family-transporter
MSNVTASTSEVRQAPLRGGFWLVVLGAALWGVDPLFRIILLKSMTSSQIVLLEHVVLFLAAAPVLWRHRAELKGIRLRQAGALMVVSWGGSAVATILFTKALSSGDLNAVLLLQKLQPIFAIGLAAVILKERLPRNFGPLIVIALAGTYLLTFGWTAPFGHVNSFISVGSLLALGAAALWGGSTVMGRYLLGSMKYETVTSLRFILALPLLFVVTAMEGAPWQVHGGLGASTAIAINLLLQALLPGLLSMLLYYKGLNTTKASVATLAELSFPMTGILINWIFFDLLVTLPQIIGFALIWTALFLISNQQSRQESLN
>NZ_CP009241.1|WP_038594628.1|5273777_5274950_+|membrane-protein
MKRPLGTNLPLSFIAVAAIAFAETIAYFVISLFGGMQFYAPLSAVVAFALAVYAVLAIFDLFNLRIRRIVFASFAGVCLLAAGVYEINQAYVNSLAEVNDREISLEKYKPFQPESKIAILDQTSTYKIIDELPRLDGATALYPLYSAFVQAVYPKDDYSVYDFESSTVVCTSTSTAYDRLIDGDTDIIFAAAPSLSQQKSAKAAGKELVLTPIGREAFVFFVHTRNKVDGLTTQQIKDIYSGKLTNWKQVGGKRDSIRAFQREENSGSQTMLEKIMEGTPLMAAPQKDVMDVMSGIISQTASYRNYKNALGFSFLFYASEMNSNNEIKLLAVDGVEPGRESIRSGAYPFASEFYAVTAGSSNPHIQPFLDWIVSPEGQELVAKTGYTPVK
>NZ_CP009241.1|WP_038594630.1|5275082_5276594_-|carboxylesterase/lipase-family-protein
MTGPVAETLYGKLQGIQSDDVNIWRGIPFAAPPVGELRFRAPQPPEPWSSIREAREFGPVSHQPVSTGSTRFGGTTPEYSEDCLYLNIWSPQAEGEALPVMVWIHGGTFVTGAGSQPMFEGTHLASKGKVIVVTVNYRLGPFGFMHLSPFGGGLASNAGLLDQIAALQWVQGNIAAFGGDPKRVTLFGESAGSMSIAALLAMPAAEGLFAGAIMQSGAAQTLKAQQGEEIGAAFLAELGIRPGGDTTLLDTLPAEQILKAAGAMVYKLSGNAMSMLFQPVIEPDTLPADPAQAIADGVASGIPLVIGTNLHEGNLFFRGSGSAENFDQSLQSLEMMMGVENLAELALHYPKTVEGQADFLTDLFFWDSSISIAERQHRYAPVWMYRFDWTIPGHPLLEKAVHGAEICYVFNNLSHMAHYGVEVTPAMESLSDAMLYAWTAFAHRGDPSVPGLSWPQYTLDNRATLIFEQDIRIVADPDRKKRTRLLSAQENPPQDSSAGTLSE
>NZ_CP009241.1|WP_038594632.1|5276614_5277769_-|AI-2E-family-transporter
MERVQVWPERFKKFFLNNKFVVSLLIILLIGVTILVFSKVPFIFKPISVLLHTVAAPLLLSGIAYYLLNPLVDRLERRSKVKRAYGIVILYLLIAGIITLILLTVIPIIRTQLLGLIDNFPKYSEQIQQEFVNLTGSAQFERIQENIGMDFTNITSKVTTWATSFLNNAVNGVGSFVGALTEIVLAVVTTPFILFYLLRDGKKLPDYLMRFIPTGLQPQTREVMSEMNSQVASYIRGQIIVSCCIGALLYIGYLIIGLEYSLVLAIVAACTAVVPYLGPAIAITPALIVAMVTSPFMLLKMIFVWTAVQLIEGKFISPQIMGKSLKIHPITIIFVIIFAGKMFGVLGIILAVPGYAVLKVVVTHVFQWFRFRSGLYQVIEEKKE

Crispr_ID: NZ_CP009241_19

• CRISPR_ID: NZ_CP009241_19
• CRISPR_location: 5282975-5283069
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_19

Consensus_repeat	Method
CTAGTCAGCACTCTCACCAACGC	CRISPRCasFinder

spacers of NZ_CP009241_19

>19.1|5282998|49|NZ_CP009241|CRISPRCasFinder
ATCCTCCAACAATCTCGTCAGCACTCTCAACAACGTATCCTCCAACAAT

CRISPR arrays and Neighbor proteins around NZ_CP009241_19

CRISPR arrays

The CRISPR arrays of NZ_CP009241_19

>merge|NZ_CP009241|19|5282975-5283069|CRISPRCasFinder
CTAGTCAGCACTCTCACCAACGCATCCTCCAACAATCTCGTCAGCACTCTCAACAACGTATCCTCCAACAATCTCGTCAGCACTCTCACCAACGC

>NZ_CP009241|19|17|5282975-5283069|CRISPRCasFinder
CTAGTCAGCACTCTCACCAACGC	ATCCTCCAACAATCTCGTCAGCACTCTCAACAACGTATCCTCCAACAAT
CTCGTCAGCACTCTCACCAACGC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038594652.1|5292827_5293766_-|sugar-ABC-transporter-permease	unknown	unknown	gnl|CDD|224096
NZ_CP009241.1|WP_038594644.1|5286893_5288507_-|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl|CDD|381091
NZ_CP009241.1|WP_038594642.1|5284896_5286861_-|hypothetical-protein	unknown	unknown	gnl|CDD|377945
NZ_CP009241.1|WP_038594650.1|5291962_5292802_-|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl|CDD|223472
NZ_CP009241.1|WP_038594634.1|5277939_5278638_-|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	unknown	unknown	gnl|CDD|350159
NZ_CP009241.1|WP_038594622.1|5270790_5271216_-|stage-V-sporulation-protein-AB	unknown	unknown	gnl|CDD|379365
NZ_CP009241.1|WP_038594654.1|5293875_5294235_-|(2Fe-2S)-ferredoxin-domain-containing-protein	unknown	unknown	gnl|CDD|239278
NZ_CP009241.1|WP_038594630.1|5275082_5276594_-|carboxylesterase/lipase-family-protein	unknown	unknown	gnl|CDD|225181
NZ_CP009241.1|WP_052092206.1|5279425_5280235_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225928
NZ_CP009241.1|WP_038594646.1|5288499_5290311_-|sensor-histidine-kinase	unknown	unknown	gnl|CDD|225519
NZ_CP009241.1|WP_038594624.1|5271212_5271875_-|stage-V-sporulation-protein-AA	unknown	unknown	gnl|CDD|378824
NZ_CP009241.1|WP_038594626.1|5272338_5273292_-|DMT-family-transporter	unknown	unknown	gnl|CDD|307170
NZ_CP009241.1|WP_038594632.1|5276614_5277769_-|AI-2E-family-transporter	unknown	unknown	gnl|CDD|279875
NZ_CP009241.1|WP_038594638.1|5280647_5282525_-|DUF2264-domain-containing-protein	unknown	unknown	gnl|CDD|378358
NZ_CP009241.1|WP_038594628.1|5273777_5274950_+|membrane-protein	unknown	unknown	gnl|CDD|270371
NZ_CP009241.1|WP_038594636.1|5278653_5279385_-|SDR-family-oxidoreductase	unknown	unknown	gnl|CDD|212491
NZ_CP009241.1|WP_038594648.1|5290412_5291807_-|extracellular-solute-binding-protein	unknown	unknown	gnl|CDD|270303
NZ_CP009241.1|WP_052092208.1|5294382_5295999_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|238558
NZ_CP009241.1|WP_081965892.1|5296035_5297076_+|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl|CDD|238558
NZ_CP009241.1|WP_038594640.1|5283647_5284784_-|glycosyl-hydrolase	unknown	unknown	gnl|CDD|369381

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038594652.1|5292827_5293766_-|sugar-ABC-transporter-permease	gnl|CDD|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.97441e-86
NZ_CP009241.1|WP_038594644.1|5286893_5288507_-|helix-turn-helix-domain-containing-protein	gnl|CDD|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.87977e-45
NZ_CP009241.1|WP_038594642.1|5284896_5286861_-|hypothetical-protein	gnl|CDD|377945	pfam07940, Hepar_II_III, Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.	0.00136722
NZ_CP009241.1|WP_038594650.1|5291962_5292802_-|carbohydrate-ABC-transporter-permease	gnl|CDD|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.17033e-85
NZ_CP009241.1|WP_038594634.1|5277939_5278638_-|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase	gnl|CDD|350159	cd09008, MTAN, 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidases. This subfamily includes both bacterial and plant 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidases (MTANs): bacterial MTANs show comparable efficiency in hydrolyzing MTA and SAH, while plant enzymes are highly specific for MTA and are unable to metabolize SAH or show significantly reduced activity towards SAH. MTAN is involved in methionine and S-adenosyl-methionine recycling, polyamine biosynthesis, and bacterial quorum sensing. This subfamily belongs to the nucleoside phosphorylase-I (NP-I) family, whose members accept a range of purine nucleosides as well as the pyrimidine nucleoside uridine. The NP-1 family includes phosphorolytic nucleosidases, such as purine nucleoside phosphorylase (PNPs, EC. 2.4.2.1), uridine phosphorylase (UP, EC 2.4.2.3), and 5'-deoxy-5'-methylthioadenosine phosphorylase (MTAP, EC 2.4.2.28), and hydrolytic nucleosidases, such as AMP nucleosidase (AMN, EC 3.2.2.4), and 5'-methylthioadenosine/S-adenosylhomocysteine (MTA/SAH) nucleosidase (MTAN, EC 3.2.2.16). The NP-I family is distinct from nucleoside phosphorylase-II, which belongs to a different structural family.	2.07267e-75
NZ_CP009241.1|WP_038594622.1|5270790_5271216_-|stage-V-sporulation-protein-AB	gnl|CDD|379365	pfam13782, SpoVAB, Stage V sporulation protein AB. This family of proteins is required for sporulation.	7.33124e-38
NZ_CP009241.1|WP_038594654.1|5293875_5294235_-|(2Fe-2S)-ferredoxin-domain-containing-protein	gnl|CDD|239278	cd02980, TRX_Fd_family, Thioredoxin (TRX)-like [2Fe-2S] Ferredoxin (Fd) family; composed of [2Fe-2S] Fds with a TRX fold (TRX-like Fds) and proteins containing domains similar to TRX-like Fd including formate dehydrogenases, NAD-reducing hydrogenases and the subunit E of NADH:ubiquinone oxidoreductase (NuoE). TRX-like Fds are soluble low-potential electron carriers containing a single [2Fe-2S] cluster. The exact role of TRX-like Fd is still unclear. It has been suggested that it may be involved in nitrogen fixation. Its homologous domains in large redox enzymes (such as Nuo and hydrogenases) function as electron carriers.	8.68037e-19
NZ_CP009241.1|WP_038594630.1|5275082_5276594_-|carboxylesterase/lipase-family-protein	gnl|CDD|225181	COG2272, PnbA, Carboxylesterase type B [Lipid metabolism].	2.72459e-156
NZ_CP009241.1|WP_052092206.1|5279425_5280235_-|GNAT-family-N-acetyltransferase	gnl|CDD|225928	COG3393, COG3393, Predicted acetyltransferase [General function prediction only].	2.47432e-23
NZ_CP009241.1|WP_038594646.1|5288499_5290311_-|sensor-histidine-kinase	gnl|CDD|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	6.20744e-50
NZ_CP009241.1|WP_038594624.1|5271212_5271875_-|stage-V-sporulation-protein-AA	gnl|CDD|378824	pfam12164, SporV_AA, Stage V sporulation protein AA. This domain family is found in bacteria - primarily Firmicutes, and is approximately 90 amino acids in length. There is a single completely conserved residue G that may be functionally important. Most annotation associated with this domain suggests that it is involved in the fifth stage of sporulation, however there is little publication to back this up.	2.94326e-15
NZ_CP009241.1|WP_038594626.1|5272338_5273292_-|DMT-family-transporter	gnl|CDD|307170	pfam00892, EamA, EamA-like transporter family. This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.	1.45122e-08
NZ_CP009241.1|WP_038594632.1|5276614_5277769_-|AI-2E-family-transporter	gnl|CDD|279875	pfam01594, AI-2E_transport, AI-2E family transporter. This family includes four different proteins from E. coli alone. One of them, YdgG or TqsA, has been shown to mediate transport of the quorum-sensing signal autoinducer 2 (AI-2). It is not clear if TqsA enhances secretion of AI-2 or inhibits AI-2 uptake. By altering the intracellular concentration of AI-2, TqsA affects gene expression in biofilms and biofilm formation. TsqA belongs to the AI-2 exporter (AI-2E) superfamily.	1.00877e-60
NZ_CP009241.1|WP_038594638.1|5280647_5282525_-|DUF2264-domain-containing-protein	gnl|CDD|378358	pfam10022, DUF2264, Uncharacterized protein conserved in bacteria (DUF2264). Members of this family of hypothetical bacterial proteins have no known function.	2.07679e-174
NZ_CP009241.1|WP_038594628.1|5273777_5274950_+|membrane-protein	gnl|CDD|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.30959e-49
NZ_CP009241.1|WP_038594636.1|5278653_5279385_-|SDR-family-oxidoreductase	gnl|CDD|212491	cd05233, SDR_c, classical (c) SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	3.02986e-64
NZ_CP009241.1|WP_038594648.1|5290412_5291807_-|extracellular-solute-binding-protein	gnl|CDD|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	8.64918e-49
NZ_CP009241.1|WP_052092208.1|5294382_5295999_+|AraC-family-transcriptional-regulator	gnl|CDD|238558	cd01138, FeuA, Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	2.32953e-34
NZ_CP009241.1|WP_081965892.1|5296035_5297076_+|ABC-transporter-substrate-binding-protein	gnl|CDD|238558	cd01138, FeuA, Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	4.49377e-59
NZ_CP009241.1|WP_038594640.1|5283647_5284784_-|glycosyl-hydrolase	gnl|CDD|369381	pfam07470, Glyco_hydro_88, Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.	2.15889e-13

Protein sequences

>NZ_CP009241.1|WP_038594638.1|5280647_5282525_-|DUF2264-domain-containing-protein
MSSQWGTIGANPLVTKEDMQNAFRQLAYPLKPYYSEGRARLKLGVTGVHYGPDIAEMEGFSRVLWGFVPFLAGGGEDDMWEILLDGIRNGTDPEHKEYWGEVGDYDQRLVEMAAFGYGLALIPDRIWGPLSEREQRNLFNWLNQMNSHPCYDCNWLFFNVLVNLGFRKAGLPYDADQLEQNLRRMDDFYLTDGWYSDGIGGHSDYYVPFAIHFYGLLYAELMGEEDPERASVFRERAGKFAAEFIQWFAADGSALPYGRSLTYRFAQSAFWGALAYAGVEAVPYGVIKGIVLRNLRWWFQQDILNADGVLNIGYTYPNLVMAENYNSPGSPYWSLKFFLPLALPDQHPFWQAEELPLPELEALAVQQPAHLVICRRAESDHVVAFNSGHKGTNEHTHTSAKYEKFAYSTAFGFSVPRSEWGISQGAFDSMLALSEAGDNLYRVRRQNEETRIEDNLLFSRWKPWPNVEVQTWVVAGLPWHIRIHRVQTARTLDAAEGGFAVALEPGLQEIMPAEGAGMTAISSHGASGILGLAGYSEAGLIRPHTNTNVLRPRTVIPTLQAKLAPGTHWLISAVYGEPGDSREGGKAMAAEPAGDPLQLLGVELTRDEIRVATHTGQSITIPLDK
>NZ_CP009241.1|WP_052092206.1|5279425_5280235_-|GNAT-family-N-acetyltransferase
MFESFEPGDRVLHSSGFKQEEVLHNLIHRIAEYADAIKLKSIDDQLIFTQSTGHNAWLWVSKELGVQQRDDLLRQLAERVKDSGIPGISAEPETAKAFAEAFCAAKGKLHHTYMMLKAYHCPEVRKPGHVSGSLLQAGEAHIPVVAEFTARFVEDAFGTSEQQENFLSYADEAVRAGNLYLWVVEGVPVSMAAIAHRSARHVRINDVYTPRTHRKQGYASAAVAELCQILLAEGLTPVLYADDKNPDSNKVYQTVGFVEAGQIADIKFD
>NZ_CP009241.1|WP_038594636.1|5278653_5279385_-|SDR-family-oxidoreductase
MLNAMKIIVTGAASGIGKEIVRLGLREGAGVIACDINGPALEQLESEMASGKLSAYRLDASHHREVKQFFAYIEQQHADINGLVNNAGIYLGKSILEYAPDEIDRVLDINVKGYVYFSQMFGRLLLGSRRQGAIVNMSSVSGQEGSSDAVYGLSKAAILGLTKSCAMNFAPYIRVNAVAPTMTNTPMMSHIPVWRQTEYLEHQLTKEPLLAEEIAESVVFLLSRKSRAYTGATFDINNGCYLR
>NZ_CP009241.1|WP_038594634.1|5277939_5278638_-|5'-methylthioadenosine/adenosylhomocysteine-nucleosidase
MITGVIGPSDEEIEHLIKKCYIDSVYEKASLKFYSGFYGEAQVVLVICGVGKVNACIATQVLIDILEVTHIILTGAAGALGDSLKHGDVVISTAVAHHDLPQEILTEYHPWMKSIFIEADTAMVNECIRIAGEDQDHGNIYAGKMISGEEFIASSEKRKRLDSFGAMCVDMESASIAQTCYVNHIPFVVIRSISDHADEESVESFETHVESVSLNALCLVEKLLVSLHKPLI
>NZ_CP009241.1|WP_038594632.1|5276614_5277769_-|AI-2E-family-transporter
MERVQVWPERFKKFFLNNKFVVSLLIILLIGVTILVFSKVPFIFKPISVLLHTVAAPLLLSGIAYYLLNPLVDRLERRSKVKRAYGIVILYLLIAGIITLILLTVIPIIRTQLLGLIDNFPKYSEQIQQEFVNLTGSAQFERIQENIGMDFTNITSKVTTWATSFLNNAVNGVGSFVGALTEIVLAVVTTPFILFYLLRDGKKLPDYLMRFIPTGLQPQTREVMSEMNSQVASYIRGQIIVSCCIGALLYIGYLIIGLEYSLVLAIVAACTAVVPYLGPAIAITPALIVAMVTSPFMLLKMIFVWTAVQLIEGKFISPQIMGKSLKIHPITIIFVIIFAGKMFGVLGIILAVPGYAVLKVVVTHVFQWFRFRSGLYQVIEEKKE
>NZ_CP009241.1|WP_038594630.1|5275082_5276594_-|carboxylesterase/lipase-family-protein
MTGPVAETLYGKLQGIQSDDVNIWRGIPFAAPPVGELRFRAPQPPEPWSSIREAREFGPVSHQPVSTGSTRFGGTTPEYSEDCLYLNIWSPQAEGEALPVMVWIHGGTFVTGAGSQPMFEGTHLASKGKVIVVTVNYRLGPFGFMHLSPFGGGLASNAGLLDQIAALQWVQGNIAAFGGDPKRVTLFGESAGSMSIAALLAMPAAEGLFAGAIMQSGAAQTLKAQQGEEIGAAFLAELGIRPGGDTTLLDTLPAEQILKAAGAMVYKLSGNAMSMLFQPVIEPDTLPADPAQAIADGVASGIPLVIGTNLHEGNLFFRGSGSAENFDQSLQSLEMMMGVENLAELALHYPKTVEGQADFLTDLFFWDSSISIAERQHRYAPVWMYRFDWTIPGHPLLEKAVHGAEICYVFNNLSHMAHYGVEVTPAMESLSDAMLYAWTAFAHRGDPSVPGLSWPQYTLDNRATLIFEQDIRIVADPDRKKRTRLLSAQENPPQDSSAGTLSE
>NZ_CP009241.1|WP_038594628.1|5273777_5274950_+|membrane-protein
MKRPLGTNLPLSFIAVAAIAFAETIAYFVISLFGGMQFYAPLSAVVAFALAVYAVLAIFDLFNLRIRRIVFASFAGVCLLAAGVYEINQAYVNSLAEVNDREISLEKYKPFQPESKIAILDQTSTYKIIDELPRLDGATALYPLYSAFVQAVYPKDDYSVYDFESSTVVCTSTSTAYDRLIDGDTDIIFAAAPSLSQQKSAKAAGKELVLTPIGREAFVFFVHTRNKVDGLTTQQIKDIYSGKLTNWKQVGGKRDSIRAFQREENSGSQTMLEKIMEGTPLMAAPQKDVMDVMSGIISQTASYRNYKNALGFSFLFYASEMNSNNEIKLLAVDGVEPGRESIRSGAYPFASEFYAVTAGSSNPHIQPFLDWIVSPEGQELVAKTGYTPVK
>NZ_CP009241.1|WP_038594626.1|5272338_5273292_-|DMT-family-transporter
MSNVTASTSEVRQAPLRGGFWLVVLGAALWGVDPLFRIILLKSMTSSQIVLLEHVVLFLAAAPVLWRHRAELKGIRLRQAGALMVVSWGGSAVATILFTKALSSGDLNAVLLLQKLQPIFAIGLAAVILKERLPRNFGPLIVIALAGTYLLTFGWTAPFGHVNSFISVGSLLALGAAALWGGSTVMGRYLLGSMKYETVTSLRFILALPLLFVVTAMEGAPWQVHGGLGASTAIAINLLLQALLPGLLSMLLYYKGLNTTKASVATLAELSFPMTGILINWIFFDLLVTLPQIIGFALIWTALFLISNQQSRQESLN
>NZ_CP009241.1|WP_038594624.1|5271212_5271875_-|stage-V-sporulation-protein-AA
MNTYSAPAIYIQLKNRVTVPKGKGVTLRDIAYLITEPEWREPLYSILLLKPAQSDGNLILIDLLTVIPHIHELIPGADIQPIGEGRTIVQIEGLVEARKPSVALFVLVWLLLFFGSALTIMNFHADVSMQEVHVRIVEMLTGRRDDHPYVFQIAYSLGIGFGMVIFFNHLFKKKWNEEPTPLEVEMFLYQKNIDHYVVHEEYSKMNRSGNDPSGPKEDGT
>NZ_CP009241.1|WP_038594622.1|5270790_5271216_-|stage-V-sporulation-protein-AB
MTAPITLGLNLLLGIAGGIAVGGGVIALFIVLDMVPRLAQLTSSYDKVHWYEGAMIGGSLLGTMSDFWNWRISSGPVVELGVGLFDGIFVGMLAAALTEVLNVLPILAKRLQMTHYLFGLLMAMVCGKVAGSLFDFFVYQQ
>NZ_CP009241.1|WP_038594640.1|5283647_5284784_-|glycosyl-hydrolase
MTAETKLGWIEEAWSKALEKTRKNSRRIGAGFPHASQGGQYELAQPYWWTAGFWPGQLWLLYNESKDESLRALAEDCEEQLDQVLNDYVRLDHDLGFMWTLTSVASYKLLASEVSKVRALKAANFLAARFNLKGSYIRAWNPWYEGEDNRGYAIIDCAMNMPLLFWAAETSGDPRYRHIAEAHMDTVVKHFIRPDGSVYHIVRFDPETGEFLEGIGGQGYAAESAWSRGTAWAIYGLTLAYHHTGKAEYLHTAQKVAHFFLARLPEDHIPHWDFRAPGEARGFRDSSAGACAASGLLLLADKVGEIEAPVYREPAIRMLESLYRNYGTWDNDAEEGLILHGTSNYPAGTNIDVPLIYGDFFYVEGLARLKGNGLFYWE
>NZ_CP009241.1|WP_038594642.1|5284896_5286861_-|hypothetical-protein
MQRVELHPIIAAMEPSDVRLYYPDGDQKTFWSYVLESPLYCDELAEIRREGERLNDVPIPELTYELFSIYARTGSRLEYERVYFERRRILNTAVLLALLEPGQEKHLAAVCEIVWSICNEYTWCLPAHLGDTGITETIDLFSAETGFALSEINCLLGERLPALLQVRIKAEVDKRLFVPYLTCGPYHWETSTHNWSAVCSGSIGSAALLLMEDKETLTEILFKVQGSMEYYLQGFGEDGACLEGLGYWNYGFGYFVYYADLLRQKSRGQLDWFRREKVGSIAAFQQKCFLGGQLVANFSDSLESGHVFLGLSYYLASAYPEVEVPPLSLRAAYTEDHCSRWAPALRNLIWCKPEEGPRDWGSASYYLPDAQWLLSRHSGTDGSFGFAAKGGNNDEPHNHNDLGGFILQGEGTVYISELGSGEYTSGYFGTERYSYDCNGSQGHSVPIIDGQYQVAGAEACAKVQEAKAGDGSDVLELDLTRAYRVDSLEGLTRRFEWETGVNPPVLAMTDEFRFAEAPAALVERFITFIPPVLEEDTVLLERQGEGDGQADGGADGQVDGRADGQVDGRADGQVDGQADGRADGQVDEKADGRADGQGQRGLRISYDIAALKPEISVHSYNDHFGKVKTWYGLDFYARNPCKHERYHFEFRFLD
>NZ_CP009241.1|WP_038594644.1|5286893_5288507_-|helix-turn-helix-domain-containing-protein
MYKVMLVDDDYPVIELLSESIRWEELGLCLMGTHENGWNAWEHARLEMPDILITDIGMPRMNGLELSSLMKELKPEVRIAILSCHNEFQYAQQAMRLNVQDYLLKDALDPEDLVQLLRKFKESLDEETKTGWENSRIKHLFGETRELRKERSIKNFIHQPLLSPEKWMDEAAEYGLFQNGESCLPVIAYLEDYRHVKYRFSSDQTLHFAVCNVMNEVLDGMKPRGLYVGYNVKSSFLLFSYKPGLQGNIYAEAAAGLKMLQSTLFRVLKIQMSFITGEGTGSPEGLKQQLGQLLAGEEQRFYLEQGEIAKRKPPQSPVSGHTNNLFAHYDQASMELREVLLGRSGDLSHLITDKWIAQIRQEKYAPEVVKDWTLKLLLDLKLKLHSLQSVRPAYSADTLHKEIVDIDSLPALREWLDNHLKSIARAKGAGAGASKRAEVMEACQYVSLRLGSRISLDEVADHLHLNSSYFSRLFKKETGTTFIEYVTKLKMERAKELLDGTNSTVGEICEQLGYDNQSYFIKTFKLHAGVTPVEYRG
>NZ_CP009241.1|WP_038594646.1|5288499_5290311_-|sensor-histidine-kinase
MIGRLRELAPKSIRHKLILAAVACILVPAALTLIIYNSLTQEAVKRQAVSNAEDSLQLVSGSVMNSLKGMVTIANYVQTNPGLRAYFKLVASGNASGNEYERFMDSNQVLEQLDTLTVVGQNCYVTILLTNNAYYMNYSVSDYNPLDLKKKPWFQKLMELKGLESYWIGVESTDFSYDKFDHPYQLTVARTLRLDSTEIYGYAIVTIMEDQLHSIFGNLSAGQKVTLLDSAGMIVSGGDPESIGKPFPYTAAVDHLKDSSVVSIAGERYLVAQQQIPFNGWRLVLMQPYSQSIVDISSIFNRVFTIQLISFFVFLLLLITLVRAFTKPLVRLGKVTTAVQRGNLLVRSGVRGNDEIGRLGLLFDQMLDRVKEMIAEVSDTQARKRKAELKMLQAQINPHFLFNVLNSIRMKVMKRGDPDSAKMIGSLSMLLRMTISREEDEIFLHEEIDLVSHYVSLMNLRQKEEAALQLDIDPEAFLLKVPRFFLQPLVENALIHGLSQKPGTISIRAVVEEKFIVLTVEDNGRGMDSSELSSLTRKISLEAESLSGKAEPKGSFSGMGLHNVVERMRILFGGEFAIEVSSIAGDGTAIKMFIPHREVIRDV
>NZ_CP009241.1|WP_038594648.1|5290412_5291807_-|extracellular-solute-binding-protein
MRTKVWAGAITGVLMLSLLSGCGGNNNNNAADGGATAGTNGGASGSTETTNLRLYTYGTEEAYNWKHTLEAYEAATPGVKIELVQLSEKGDTQEAFKKLDLEAASSAQMDILMFSDAAGYAQRVALGMAEPLDEYIAKDNYKVEEDYKVDTHLDGKVYALPGKFNPWYVLLNKDQLDEAGLAVPAEWTWDEFADYAKKLTKGEGAEKRYGTYFHGPQAGGWMEFLKLKLENQPQNSEFLKADGTSNLDDPNFKATLELRLRMEKEDKSSVPYSDMISQKLAYRTQFFNQSASMILIGSWMNTEIGGTEKVPLNFNVAVAPFPKNTAGDENGLTPVTTDYVAVAAKSKNKEAAYKFVRWYTTEGQLVQGKNIPAWSKVTSDQVEGIIDTILTGTKNPEKVDKKSLVDTLVASKASAIIPPATYQAEVYKAINEEYEKMILGDQDVDTTVKNAKERVDKIIAANKK
>NZ_CP009241.1|WP_038594650.1|5291962_5292802_-|carbohydrate-ABC-transporter-permease
MEIRTGLDWRKVIITVVMFAGSVLFLLPFIWMLVTSFKVESEVFAYPIQWLPKKWNAIENYKEVWFGDYPFTLYYWNSIKVALITTALSCLVSAMAAYGFSKIKFRSSNFLFMIVLVTYMIPGQAILIPQFILYRNIGLFDSHFGLILLGSFSVLGTFMLRQFFMGLHQEFIESAKIDGAGHPRIFWSIALPLVKPAVATYAILRFIWTWNDYQNPLIFIRSDKLLTLPIAIQKFTSMSGEFYSLIMAAAVSAILPLIIIFILGQKSVIEGIALGGVKG
>NZ_CP009241.1|WP_038594652.1|5292827_5293766_-|sugar-ABC-transporter-permease
MGQNLETLPQQPPVRSRRAWSLQKGETLSGLLFVSPMLIGVTILVLIPIIATLFLGFADWNFVQGFDGIRWVGLQNFTNLLQDEMFIRSVRNNFLFLLTVPVYLLVSMVLAILIDRYVYMKGYFKIAYFVPYVSMTVAVAIVWQVLFQPSYGPINEMLKAIGIADPPKWIADPHFALISIMMISVWISIGFNMIIYIAGLQSIPKDLYEAADIDGAGAWTKFRRITFPLLSPTTFFLLVTGIIATFKVFDIIAVLTQGGPIGSTTMMVWYLYDTAFVNLKVGYASAIAVVLFIFVMLITFGQWLAEKKWVNY
>NZ_CP009241.1|WP_038594654.1|5293875_5294235_-|(2Fe-2S)-ferredoxin-domain-containing-protein
MTTWNLQGTVSHLLICNGSSCRKHKGEEVADAIEDEIEKQGAERQVHTTVTRCNGRCSDACVVISYPEGVWYKEITPKSAKALVRKVLEGERLEDNVLYTYDGGLIAATEKDAKGKKKK
>NZ_CP009241.1|WP_052092208.1|5294382_5295999_+|AraC-family-transcriptional-regulator
MPLRQPGDSRPHSHHFYFPVRVENLTGLAASIAPGSSGHLSIIVTGGSGTIDIQDERLSLSGGSMLCCSTQPGVSLSPQHQLQGVWIEYSTFPLLSNQTNPLNDRHPLGNCSTKVCTLAARLLRVWEGSEIQSPFTVQQLFTELLTELHGEIRENSQSPAHWLDRVLEYIEAHYSEDITRSQMAERAGVSPEHFSRVFRKATGQTFNEYVTLQRIRRAQKRMLTGAPNLSQLALEVGYVEGTYLSRKFKQVVGISPAAYHRKNKRIVALNFNHTASLRALEITPQLGVYSGWMERHETVPSALKLQLEGSSAAMLYNRVAAVRPDVIISYDLPGESKQLLPVAPVIELPYMQMDWREQFRMIAGIADRQPQAEAWLRHYDQLCYEANLQLDRLLGARGTAVIWEFGTSSAYCFSSSYGHGCQILYGDLGFQPPGVLMEHGLMNRGYLEIPAEQIADYPADHIFFTSSASTAEGQRRFETLLRSARWQELDAARSGHVYLLDQPDMFYGFDPLSSLAQLKTLMRTIRSQISIGQDHIKP
>NZ_CP009241.1|WP_081965892.1|5296035_5297076_+|ABC-transporter-substrate-binding-protein
MIIVLHKEAYKLINQQHNSNTRKRWLVYPLLLTLTLLVSACGSNQSTGSATNSGSAAEAPAPSQQPAETTAPASFKTVTTVNGDIEIPVQPKRIVAEEYLGSLIALDTIPVGAPGLTLQNMYYKESLTGVADTGTYGKMSPEKIIALDPDLIISGNADSYEALSQIAPTVIVPYGDLKDAHQELTYFGELLGKEQQAKDWLAEYDKRIAAAKAKVDAAIPADATFSILEHSEKTTWVYGDNFGRGGQPIYQALGRKPPTEVAAEIMEKQWAELSTEVLNKYAGDYLIVTDNNYTVQNFKDDPIWGNLPAVKNDHLYVWKEERSWYYDPIAVLSQTEELADWLTKGQ

Crispr_ID: NZ_CP009241_20

• CRISPR_ID: NZ_CP009241_20
• CRISPR_location: 5708066-5708157
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_20

Consensus_repeat	Method
GAATCATGAAGCTATGCTCACAAAACTT	CRISPRCasFinder

spacers of NZ_CP009241_20

>20.1|5708094|36|NZ_CP009241|CRISPRCasFinder
AAGCCTATGCTTCCGATGCCAGTTTTGTACGAACCG

CRISPR arrays and Neighbor proteins around NZ_CP009241_20

CRISPR arrays

The CRISPR arrays of NZ_CP009241_20

>merge|NZ_CP009241|20|5708066-5708157|CRISPRCasFinder
GAATCATGAAGCTATGCTCACAAAACTTAAGCCTATGCTTCCGATGCCAGTTTTGTACGAACCGAATCCATGAAGCTATGCTCACAAAACTT

>NZ_CP009241|20|18|5708066-5708157|CRISPRCasFinder
GAATCATGAAGCTATGCTCACAAAACTT	AAGCCTATGCTTCCGATGCCAGTTTTGTACGAACCG
AATCCATGAAGCTATGCTCACAAAACTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038595311.1|5707544_5707961_-|cytidine-deaminase	unknown	unknown	gnl|CDD|235875
NZ_CP009241.1|WP_156130946.1|5710880_5711045_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038595302.1|5700542_5701223_-|hypothetical-protein	unknown	unknown	gnl|CDD|350620
NZ_CP009241.1|WP_038595319.1|5713329_5714166_+|AraC-family-transcriptional-regulator	unknown	unknown	gnl|CDD|378964
NZ_CP009241.1|WP_156130945.1|5709317_5709455_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038595309.1|5705536_5707012_-|glycosyl-hydrolase	unknown	unknown	gnl|CDD|366944
NZ_CP009241.1|WP_038595317.1|5711611_5712307_+|hypothetical-protein	unknown	unknown	gnl|CDD|374209
NZ_CP009241.1|WP_038595306.1|5703557_5703899_-|YolD-like-family-protein	unknown	unknown	gnl|CDD|370161
NZ_CP009241.1|WP_052092247.1|5701648_5702197_+|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213231
NZ_CP009241.1|WP_038595318.1|5712296_5713067_-|2-phosphosulfolactate-phosphatase	unknown	unknown	gnl|CDD|377205
NZ_CP009241.1|WP_076109072.1|5709966_5710143_+|putative-motility-protein	unknown	unknown	gnl|CDD|379452
NZ_CP009241.1|WP_144024223.1|5711286_5711466_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038595315.1|5710254_5710797_+|ImmA/IrrE-family-metallo-endopeptidase	unknown	unknown	gnl|CDD|368753
NZ_CP009241.1|WP_038595307.1|5704182_5704827_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_081965920.1|5704934_5705519_+|PH-domain-containing-protein	unknown	unknown	gnl|CDD|367615
NZ_CP009241.1|WP_038595313.1|5708679_5708943_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038595314.1|5708932_5709145_-|hypothetical-protein	unknown	unknown	gnl|CDD|225253
NZ_CP009241.1|WP_052092248.1|5702169_5702577_+|hypothetical-protein	unknown	unknown	gnl|CDD|213231
NZ_CP009241.1|WP_038595303.1|5702573_5703041_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038595305.1|5703117_5703486_+|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038595311.1|5707544_5707961_-|cytidine-deaminase	gnl|CDD|235875	PRK06848, PRK06848, cytidine deaminase.	2.59857e-64
NZ_CP009241.1|WP_038595315.1|5710254_5710797_+|ImmA/IrrE-family-metallo-endopeptidase	gnl|CDD|368753	pfam06114, Peptidase_M78, IrrE N-terminal-like domain. This entry includes the catalytic domain of the protein ImmA, which is a metallopeptidase containing an HEXXH zinc-binding motif from peptidase family M78. ImmA is encoded on a conjugative transposon. Conjugating bacteria are able to transfer conjugative transposons that can, for example, confer resistance to antibiotics. The transposon is integrated into the chromosome, but during conjugation excises itself and then moves to the recipient bacterium and re-integrate into its chromosome. Typically a conjugative tranposon encodes only the proteins required for this activity and the proteins that regulate it. During exponential growth, the ICEBs1 transposon of Bacillus subtilis is inactivated by the immunity repressor protein ImmR, which is encoded by the transposon and represses the genes for excision and transfer. Cleavage of ImmR relaxes repression and allows transfer of the transposon. ImmA has been shown to be essential for the cleavage of ImmR. This domain is also found in in metalloprotease IrrE, a central regulator of DNA damage repair in Deinococcaceae, HTH-type transcriptional regulators RamB and PrpC.	1.39468e-10
NZ_CP009241.1|WP_038595319.1|5713329_5714166_+|AraC-family-transcriptional-regulator	gnl|CDD|378964	pfam12833, HTH_18, Helix-turn-helix domain.	5.90284e-16
NZ_CP009241.1|WP_038595309.1|5705536_5707012_-|glycosyl-hydrolase	gnl|CDD|366944	pfam02156, Glyco_hydro_26, Glycosyl hydrolase family 26.	1.45558e-46
NZ_CP009241.1|WP_038595306.1|5703557_5703899_-|YolD-like-family-protein	gnl|CDD|370161	pfam08863, YolD, YolD-like protein. Members of this family are functionally uncharacterized. However it has been predicted that these proteins are functionally equivalent to the UmuD subunit of polymerase V from gram-negative bacteria. This family has been shown to belong to the WYL-like superfamily.	4.85655e-17
NZ_CP009241.1|WP_052092247.1|5701648_5702197_+|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.64717e-60
NZ_CP009241.1|WP_038595318.1|5712296_5713067_-|2-phosphosulfolactate-phosphatase	gnl|CDD|377205	pfam04029, 2-ph_phosp, 2-phosphosulpholactate phosphatase. Thought to catalyze 2-phosphosulpholactate = sulpholactate + phosphate. Probable magnesium cofactor. Involved in the second step of coenzyme M biosynthesis. Inhibited by vanadate in Methanococcus jannaschii. Also known as the ComB family.	2.52101e-29
NZ_CP009241.1|WP_038595317.1|5711611_5712307_+|hypothetical-protein	gnl|CDD|374209	pfam15902, Sortilin-Vps10, Sortilin, neurotensin receptor 3,. Sortilin, also known in mammals as neurotensin receptor-3, is the archetypical member of a Vps10-domain (Vps10-D) that binds neurotrophic factors and neuropeptides. This domain constitutes the entire luminal part of Sortilin and is activated in the trans-Golgi network by enzymatic propeptide cleavage. The structure of the domain has been determined as a ten-bladed propeller, with up to 9 BNR or beta-hairpin turns in it. The mature receptor binds various ligands, including its own propeptide (Sort-pro), neurotensin, the pro-forms of nerve growth factor-beta (NGF)6 and brain-derived neurotrophic factor (BDNF)7, lipoprotein lipase (LpL), apo lipoprotein AV14 and the receptor-associated protein (RAP)1.	0.00128894
NZ_CP009241.1|WP_038595302.1|5700542_5701223_-|hypothetical-protein	gnl|CDD|350620	cd14845, L-Ala-D-Glu_peptidase_like, L-Ala-D-Glu peptidase, also known as L-alanyl-D-glutamate endopeptidase. This L-Ala-D-Glu peptidase family includes L-alanyl-D-glutamate peptidase (bacteriophage T5) (also known as L-alanoyl-D-glutamate endopeptidase), and Ply118 and Ply500 L-Ala-D-Glu peptidase. Bacteriophage endolysin degrades the peptidoglycan of the bacterial host from within, leading to cell lysis and release of progeny virions. The bacteriophage endolysin Ply118 cleaves between L-Ala and D-Glu residues of Listeria cell wall peptidoglycan. This family belongs to the MEROPS peptidase M15 subfamily C.	4.033e-58
NZ_CP009241.1|WP_038595314.1|5708932_5709145_-|hypothetical-protein	gnl|CDD|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.44054e-06
NZ_CP009241.1|WP_052092248.1|5702169_5702577_+|hypothetical-protein	gnl|CDD|213231	cd03264, ABC_drug_resistance_like, ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	3.42992e-16
NZ_CP009241.1|WP_076109072.1|5709966_5710143_+|putative-motility-protein	gnl|CDD|379452	pfam14070, YjfB_motility, Putative motility protein. This family of proteins is regulated in B. subtilis by SigD, and is likely to be involved in motility or flagellin production, Proteins in this family are approximately 60 amino acids in length, and contain two highly conserved asparagine residues.	6.89235e-05
NZ_CP009241.1|WP_081965920.1|5704934_5705519_+|PH-domain-containing-protein	gnl|CDD|367615	pfam03703, bPH_2, Bacterial PH domain. Domain found in uncharacterized family of membrane proteins. 1-3 copies found in each protein, with each copy flanked by transmembrane helices. Members of this family have a PH domain like structure.	1.34356e-11

Protein sequences

>NZ_CP009241.1|WP_038595311.1|5707544_5707961_-|cytidine-deaminase
MGKEISIEDQTLIASAVEIIKKRYEWERHHVSAALRTKTGEIFTAVHLEASLSRVTVCAEAMVIGKAISEGYKEFDTIVAVRHPDPDSEDREIKVVSPCGMCRELIADYGKDCKVILIEDDNLTKVDIIDLLPLRYAR
>NZ_CP009241.1|WP_038595309.1|5705536_5707012_-|glycosyl-hydrolase
MEQRILRDMLDSASRLVNDAQWQAAFSSLLRTPADTELALPALKVLNTLYSLQGTAILSGQHDYLESPDEFSNKLKNTCGQYAALHGYELGAINNQTETVIESQRQAVVDSAVRWHKAGGIVTMSYHAHLPGTAPAWSNVSMSLSEGDFAKYLTPGTAQYNALMKDLDKTALSLKKLRDAGVPVLWRPYHEMNGGWFWWGQKRRFTELWNLMFERYTVYNKLHNLLWVWSPNAKNQWCDEPAGYYPGAGRVDVLALDIYEGDFKKSHHDTLWDLGRGKLIAIGENGQLPSPALLAGSQNKWSYQMTWGKLLYENNSDVVIKSFMKDSFVLTRSEYTVKAAEPVSAPPATSLPGLRGEYYNNASLSGTPALVRTDANINFIWKQGAPDPAVPANLFSVRWSGRLKAGYSEGYTIYTSSDDGIRVWIDGVLVIDSWMKQSGQERKGSIGLIASKLHELKVEYYENQGDAKAVLMWESSSQPKGVIPAGALYLP
>NZ_CP009241.1|WP_081965920.1|5704934_5705519_+|PH-domain-containing-protein
MGKRSPAVTGNLMVYYNHFIQNKRGRSLMAYCTACGAENKQSAKFCGKCGAPVDGTVPAAPHQTSAKGMSGSGSGPEVELWEGKPAGISDRLKGLIGLNTTTYTITSQRIMVKTGLIGKDLEEVELLRVNDFSVAQSIPDRLLGIGTLTVFSDDPSSPQLLFRKIRKVQSVKDVLRGAVRNEKIANNISYREQI
>NZ_CP009241.1|WP_038595307.1|5704182_5704827_-|hypothetical-protein
MRKALLTGLLMVVVILSACSNNSSAPASEEEAQETVQNFYDKMSKFDEKGKSSLDNFNTTLTSYSTGKASDKELEKAVDQFQDATSEIADEVGDVKISKSLPEEVQKLLSESMIAFKSAYSIKEQASKSAVSPDVTADEFNAMNQQADVAMLYGISKLNEARAAVGLIEDEIGTEAAGTADAESGTAVGSTDVKLAPTTENSTNSGTSTVTGGK
>NZ_CP009241.1|WP_038595306.1|5703557_5703899_-|YolD-like-family-protein
MTLGKKLKGNGLWESSRMMLPEHKSRIIRDERETLRTIKPILDEQKLEEIECTLALSLRAHVRVTVVLFDPFERKLLSGFVTSIHTHSREFKLQWAEEWKWVNVDDILEVYIV
>NZ_CP009241.1|WP_038595305.1|5703117_5703486_+|hypothetical-protein
MELLPPLRRNLGNLLLFILSYAYLSIVFAGANKTEINPYFDVTGLQFIVKNVFSQFRQYFALTRPNDPSISLFNLFVHAQYAGILSLIVGITFAVASASLTVVVPPNLFNVLYMLMWYMGII
>NZ_CP009241.1|WP_038595303.1|5702573_5703041_+|hypothetical-protein
MTRTASALNLLSVSLVLVKERIRRASFLWTIVVFACCTYYYFPANDTTGSLTTVIKNSLLDGHYRGTYNSVWMGLLVVLFFNCLLLFGGIFLIRNSIGRDVTLQLELYYTTSPLNVHQYAESKRLANFLYLALVAMAVEVMALIMQLSRGGKLCD
>NZ_CP009241.1|WP_052092248.1|5702169_5702577_+|hypothetical-protein
MGLDPDERVNLKNLITKAAQDATVIYSTHIVSDIEALARSIIIMKQGRILAAGAVNQLTEPVEGLVWKMNVDYSGLATLQDKYICSSSNRSSDGIEVRVLSSTPPSAGAEPVYPTLEDVYLYLIHQDKIKGESPA
>NZ_CP009241.1|WP_052092247.1|5701648_5702197_+|ATP-binding-cassette-domain-containing-protein
MYFENLNWVWGANVNITIHNVEQVYRNNSHALYPVHLEFHEGVYGLLGPNGAGKSTLMNILTMAKKPTSGTVYCNGVDINTIQNEYKSRIGYLPQTFGLFPALSGREFLMYVAALKGLSKRHAAGRIQELLSVLNLNEVGDQHIASYSGGMRQRISIAQACLTIPSFCCWMNPRWDSIPTNG
>NZ_CP009241.1|WP_038595302.1|5700542_5701223_-|hypothetical-protein
MLTLDQVKSKSAGSLGKLHPVLQAAADELIQRSYAKGVPIIITQGMRTIAEQNALYAQGRTKKGPIVTNARGGSSYHNYGLAIDFALLLPDGNNVSWDMNRDGDSDKVPDWQEVAEVAKQLGFEWGGDWTSFKDYPHLQMTFGLTTAQLLAGKHPTEQQVQEALAKISANEPAEEQGITIVLNGRKLTTGLVENGTTYAPVRAVAEALGAKVTYDAASKTVNLVKE
>NZ_CP009241.1|WP_038595313.1|5708679_5708943_-|hypothetical-protein
MLDDTARKLLRIMYHFSNHFRRMPTLPELARLSGRTPAGIYSGFRELVLEGHIQWQLPQPIESAVILVAWETPEPGAHTSISGHWKD
>NZ_CP009241.1|WP_038595314.1|5708932_5709145_-|hypothetical-protein
MSVKELEKLIGQVIEIIYEDKSGNITQRRVEVHGIKGGLLRATCLTTGGPRVFRTANILAWRQAKARYAG
>NZ_CP009241.1|WP_156130945.1|5709317_5709455_+|hypothetical-protein
MSEEEAFKEWFALAGTVKELYIIEVDETTGRIKRQIGPTARKKKK
>NZ_CP009241.1|WP_076109072.1|5709966_5710143_+|putative-motility-protein
MDIAALSMAMSQASLHQAAGLQVMNIATKTTEIQSQNLVQMLQQSPHPNLGKTLDIVV
>NZ_CP009241.1|WP_038595315.1|5710254_5710797_+|ImmA/IrrE-family-metallo-endopeptidase
MQSYYQMTALEKWTEDLYQRLNVQQPSQISIEYISERLNIWIHYLDVRSKSIEASAGMYSMFIDSRLPPELQRLEFLHELCHLLRHAGNHTLMPEQFTQAQEDESERFILYAAMPYSMISARMLPELREDAVQYIASTFQVPAELAMQRIDQIQRRVFQGQLMAVMERNEDRNLIHRHIR
>NZ_CP009241.1|WP_156130946.1|5710880_5711045_+|hypothetical-protein
MDAIQVIQLLMTHPDYSVDAVHPDIPDFVGIETIEVDHETQTFSILLQEPKEED
>NZ_CP009241.1|WP_144024223.1|5711286_5711466_-|hypothetical-protein
MSEQKKIQELERRIATLENQGGHPPGNDPGKILRRVIWGILIVFFLLTAIGVMQFVSAG
>NZ_CP009241.1|WP_038595317.1|5711611_5712307_+|hypothetical-protein
MKTLWVLMSVIQLMFAYSPQAGNIDEDNNIRTFQYSLEAGYSWKATSAGSGMYQADNRIYMSNDRGISWHKLSDSLNGTLPSGPIGDLKFKTKDTGWITIHSPRQGDIGLYKTTDGGIHWAKEQLEVPPKYAAVQFNPASPIFFTSTNYGIVLLNEIGLLNEEGQTETSLLFYATQDNGRHWTPIMDRPEGEWNGLSWKASLDQKSASYSWNITIGDRTWTSSNGEIWSMN
>NZ_CP009241.1|WP_038595318.1|5712296_5713067_-|2-phosphosulfolactate-phosphatase
MFYDQAPYKVKVEWGQRGARAASERGDIVIIVDVLSFSSTVVTAVQHKANVFPYPPPINENAKAYARANSAEIVWGRAEAIREGGHSLSPLSFSSADFGRDFVLCSLNGAACTWIASQVPALLIGCFLNASAVAEVANRLMQQLQANITVVPCGERWSDVREGENNLRPGIEDYLGAGLILSQLTGSKSPEAEVCIGALKYSSKTIRELIWDCASARELRERGYEDDVTYCCQVNISSAVPILQNTRFINAKDLNS
>NZ_CP009241.1|WP_038595319.1|5713329_5714166_+|AraC-family-transcriptional-regulator
MSSPFVPVQARSSILNLPGKYNEWRPSVKLHKYVYCYWLSTIRSSQDSQSPISISGRKEMIAPDGCIDIVFQIGKDRATLHGMIVGTLDRSLYVDLAYDRLHTFGIRFYPGGLQAFLREPADLFTNQILDLSEIWKQLQTELTGHLQTAASMEHFILLTDRSLLSRLNDSPAGDDLFQNALVHIWQAQGILTVKELARRECVSERQLRRIFYERTGVSTKTFTRIMRFQSVLGMLNRMEGRKLTDAALQTGYYDQAHFIHEFQSICGLLPSEYIKSLN

Crispr_ID: NZ_CP009241_21

• CRISPR_ID: NZ_CP009241_21
• CRISPR_location: 5853530-5853618
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_21

Consensus_repeat	Method
AAAAGTTTTGTGAGCGCAGCTTA	CRISPRCasFinder

spacers of NZ_CP009241_21

>21.1|5853553|43|NZ_CP009241|CRISPRCasFinder
CGTGGTTATTCTTCGAGCAAAACTGGCTTCGGAAGCATACACA

CRISPR arrays and Neighbor proteins around NZ_CP009241_21

CRISPR arrays

The CRISPR arrays of NZ_CP009241_21

>merge|NZ_CP009241|21|5853530-5853618|CRISPRCasFinder
AAAAGTTTTGTGAGCGCAGCTTACGTGGTTATTCTTCGAGCAAAACTGGCTTCGGAAGCATACACAAAAAGTTTTGTGAGCGCTGCTTA

>NZ_CP009241|21|19|5853530-5853618|CRISPRCasFinder
AAAAGTTTTGTGAGCGCAGCTTA	CGTGGTTATTCTTCGAGCAAAACTGGCTTCGGAAGCATACACA
AAAAGTTTTGTGAGCGCTGCTTA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038595444.1|5836172_5840354_-|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl|CDD|274299
NZ_CP009241.1|WP_038595460.1|5853659_5854238_-|DNA-3-methyladenine-glycosylase-I	unknown	unknown	gnl|CDD|377025
NZ_CP009241.1|WP_081965930.1|5854642_5856331_-|DUF4179-domain-containing-protein	unknown	unknown	gnl|CDD|379369
NZ_CP009241.1|WP_038595449.1|5845773_5846763_+|Na/Pi-cotransporter-family-protein	unknown	unknown	gnl|CDD|224202
NZ_CP009241.1|WP_038595459.1|5852454_5853513_-|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl|CDD|283886
NZ_CP009241.1|WP_038595455.1|5850849_5851614_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl|CDD|236959
NZ_CP009241.1|WP_038595457.1|5851768_5852452_-|site-2-protease-family-protein	unknown	unknown	gnl|CDD|100079
NZ_CP009241.1|WP_038595441.1|5834878_5836060_-|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl|CDD|273178
NZ_CP009241.1|WP_038595467.1|5860042_5861221_-|sn-glycerol-1-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|341454
NZ_CP009241.1|WP_063848056.1|5856263_5856824_-|RNA-polymerase-sigma-factor	unknown	unknown	gnl|CDD|274357
NZ_CP009241.1|WP_038595473.1|5864635_5865325_-|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl|CDD|236181
NZ_CP009241.1|WP_038595447.1|5844274_5845675_-|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl|CDD|224017
NZ_CP009241.1|WP_038595475.1|5865536_5866550_-|iron-ABC-transporter-permease	unknown	unknown	gnl|CDD|376439
NZ_CP009241.1|WP_038595446.1|5840350_5843872_-|helicase-exonuclease-AddAB-subunit-AddB	unknown	unknown	gnl|CDD|213736
NZ_CP009241.1|WP_038595451.1|5846960_5849195_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038595453.1|5849499_5850846_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	unknown	unknown	gnl|CDD|223694
NZ_CP009241.1|WP_038595471.1|5862934_5864608_-|ribulokinase	unknown	unknown	gnl|CDD|235221
NZ_CP009241.1|WP_081966238.1|5866546_5867578_-|iron-ABC-transporter-permease	unknown	unknown	gnl|CDD|376439
NZ_CP009241.1|WP_038595464.1|5857153_5859586_-|EAL-domain-containing-protein	unknown	unknown	gnl|CDD|236645
NZ_CP009241.1|WP_038595469.1|5861363_5862854_-|L-arabinose-isomerase	unknown	unknown	gnl|CDD|179503

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038595444.1|5836172_5840354_-|UvrD-helicase-domain-containing-protein	gnl|CDD|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP009241.1|WP_038595460.1|5853659_5854238_-|DNA-3-methyladenine-glycosylase-I	gnl|CDD|377025	pfam03352, Adenine_glyco, Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.	1.56789e-126
NZ_CP009241.1|WP_081965930.1|5854642_5856331_-|DUF4179-domain-containing-protein	gnl|CDD|379369	pfam13786, DUF4179, Domain of unknown function (DUF4179).	1.05927e-09
NZ_CP009241.1|WP_038595449.1|5845773_5846763_+|Na/Pi-cotransporter-family-protein	gnl|CDD|224202	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism].	4.09127e-58
NZ_CP009241.1|WP_038595459.1|5852454_5853513_-|50S-ribosomal-protein-L11-methyltransferase	gnl|CDD|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	3.81329e-106
NZ_CP009241.1|WP_038595455.1|5850849_5851614_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl|CDD|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	1.65628e-83
NZ_CP009241.1|WP_038595457.1|5851768_5852452_-|site-2-protease-family-protein	gnl|CDD|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	5.89358e-52
NZ_CP009241.1|WP_038595441.1|5834878_5836060_-|exonuclease-SbcCD-subunit-D	gnl|CDD|273178	TIGR00619, Nuclease_SbcCD_subunit_D, exonuclease SbcD. All proteins in this family for which functions are known are double-stranded DNA exonuclease (as part of a complex with SbcC homologs). This complex functions in the initiation of recombination and recombinational repair and is particularly important in regulating the stability of DNA sections that can form secondary structures. This family is likely homologous to the MRE11 family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	9.76825e-76
NZ_CP009241.1|WP_038595467.1|5860042_5861221_-|sn-glycerol-1-phosphate-dehydrogenase	gnl|CDD|341454	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner. Glycerol-1-phosphate dehydrogenase (G1PDH) plays a role in the synthesis of phosphoglycerolipids in Gram-positive bacterial species. It catalyzes the reversibly reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in a NADH-dependent manner. Its activity requires a Ni++ ion. In Bacillus subtilis, it has been described as AraM gene in L-arabinose (ara) operon. AraM protein forms homodimer.	7.32988e-146
NZ_CP009241.1|WP_063848056.1|5856263_5856824_-|RNA-polymerase-sigma-factor	gnl|CDD|274357	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family. This model encompasses all varieties of the sigma-70 type sigma factors including the ECF subfamily. A number of sigma factors have names with a different number than 70 (i.e. sigma-38), but in fact, all except for the Sigma-54 family (TIGR02395) are included within this family. Several Pfam models hit segments of these sequences including Sigma-70 region 2 (pfam04542) and Sigma-70, region 4 (pfam04545), but not always above their respective trusted cutoffs.	2.44072e-33
NZ_CP009241.1|WP_038595473.1|5864635_5865325_-|L-ribulose-5-phosphate-4-epimerase	gnl|CDD|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	2.75589e-179
NZ_CP009241.1|WP_038595447.1|5844274_5845675_-|class-I-SAM-dependent-rRNA-methyltransferase	gnl|CDD|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	3.80567e-125
NZ_CP009241.1|WP_038595475.1|5865536_5866550_-|iron-ABC-transporter-permease	gnl|CDD|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	1.43318e-79
NZ_CP009241.1|WP_038595446.1|5840350_5843872_-|helicase-exonuclease-AddAB-subunit-AddB	gnl|CDD|213736	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RexAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. Nevertheless, the partner is designated AddB in both systems. This model describes the AddB protein as found Bacillus subtilis and related species. Although the RexB protein of Streptococcus and Lactococcus is considered to be orthologous, functionally equivalent, and merely named differently, all members of this protein family have a P-loop nucleotide binding motif GxxGxGK[ST] at the N-terminus, unlike RexB proteins, and a CxxCxxxxxC motif at the C-terminus, both of which may be relevant to function. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP009241.1|WP_081966238.1|5866546_5867578_-|iron-ABC-transporter-permease	gnl|CDD|376439	pfam01032, FecCD, FecCD transport family. This is a sub-family of bacterial binding protein-dependent transport systems family. This Pfam entry contains the inner components of this multicomponent transport system.	2.25103e-85
NZ_CP009241.1|WP_038595453.1|5849499_5850846_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	gnl|CDD|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	0
NZ_CP009241.1|WP_038595471.1|5862934_5864608_-|ribulokinase	gnl|CDD|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP009241.1|WP_038595464.1|5857153_5859586_-|EAL-domain-containing-protein	gnl|CDD|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	5.43296e-121
NZ_CP009241.1|WP_038595469.1|5861363_5862854_-|L-arabinose-isomerase	gnl|CDD|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0

Protein sequences

>NZ_CP009241.1|WP_038595459.1|5852454_5853513_-|50S-ribosomal-protein-L11-methyltransferase
MLWHELTVHTTEEAQEMISNLLYEAGAGGVSIEESGTLNKVRDTRYGELYDEPLNDIPEGEAVIKGYYAETVPMDAIIAELAPRIEELREFGIDPGKALISWKTVDENDWAHAWKQYFKPLRVSDRLTIKPTWEEYTPAGPEEKIIELDPGMAFGTGTHPTTALCLRALEKHISGDEEVIDVGTGSGILAVGAVLLGAKSVLALDLDPVAVESARENVALNRLQDSITVKESDLLSLLGGEGAADTAAGDMWPSARASHTDAQQAVPAKPKAEDSLGVTLPVKVVVANILAEIIVLFTDDVYRALQPGGIYITSGIYKDKEGLVAQALESSGFEIKEVSREEDWVAFTAGKR
>NZ_CP009241.1|WP_038595457.1|5851768_5852452_-|site-2-protease-family-protein
MDFLDRILVVPLQQLPFFLITLVIAFTVHEFAHAYFANKFGDPTARLLGRMTLNPAVHFDLFGIILLLIAGFGWARPVPVNRDNFRRPRLMGVIVSAAGPISNLLLGILGTLVYAALHASGAIESITNEQLLRAVYWFFGMFIQFNFFLFLFNLIPLPPLDGYRIVEDVAPRPIRAKLQQYEQWTVFIFLLIIFIPGLRAYTIEPLNSWALQIGNDFFRLFFNLFGG
>NZ_CP009241.1|WP_038595455.1|5850849_5851614_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MQRYFVAPEQFGPEQVTIDGEDARHIAKVMRGKAGDKLIVSDGISREALAEISSIEIGEIIVNILESLEMTHEPRIKITVAQSLPKGDKLETVIQKCTEIGAVAFVPFLSERTIVQYDERKENKRLERWRKICKEAAEQAHRNIVPAVHAPLSWKLLLQSFRDYDAVYFCYEKEEGMQLRSAAAPWLSSLPPESPGRVMIVVGPEGGFSPEECLAAEEAGAVPVGLGRRILRCETAGMVAAACILYESGEMGGA
>NZ_CP009241.1|WP_038595453.1|5849499_5850846_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB
MPSVAFYTLGCKVNFYDTEAIWQLFKNEGYEQVDFEGPADVYLINTCTVTNTGDKKSRQMIRRAVRRNPEAIVAVTGCYAQTSPGEILDIPGVDLVIGNQDREQIMTHVKNIQGSRQPVNAVRNIMKTREFEELDVPGFADRTRAFMKIQDGCNNFCTFCIIPWSRGLSRSRDPKSIVAQAHQLVEAGYKEFVLTGIHTGGYGDDLENYRLADLLWELDKVDGLERVRISSIEASQIDDKLLEVLNRSSKMCRHLHIPLQAGHNEVLKAMRRKYTTEEYYAKMELIRQAMPDVGITTDVIVGFPGETEQMFRAGYDFMKAVNYSEMHVFPYSKRTGTPAARMLNQVDEEIKNVRVQELIDLSEEMQLAYARRFVGKTLSVIPERSAKGAPGRSTQHGFSDNYLQVFFSGDDSLQGQLCEVKITEAGVNECRGELVGMSQAGLKQAVRQ
>NZ_CP009241.1|WP_038595451.1|5846960_5849195_-|hypothetical-protein
MTVNRKMTKLLLIIALLATVVFPVSVFADKGDINSIEFESSAKLDLVVGQTPKQLKVFANVEGSSSKRDVTGAVTWNSSNTTAVKVVNGLLTPFDSGTAIITATYNSMLTTIEVSVTHPFKDLKIEHKEGNYKLGDSEEKRTIKAKVLGGKSITEATDVTKDVEWSSSDTNVLTISDGKVNLLKEGKVTITAKYKGLTATYKTEVEMAFTDIDIKQNDKVVKDVETLMGDSAIKLTATTKAATQAESEDVTAKGDWSSSNTAVATVKNGELKVLATGKTVITIAYLGVKASVDVYVRSSYEAILLTPSKEQKLFMGEVLDVKAEVRDAANSTLNVSQNATWTSSDQLVATAKSEADAADITAKGVGDSTIKAEYKGVSREIKLKVLPTITAIEVEKAENEKSEKEMFKGDTLSLPKVNGTKLDGTKLELSQEIEWTSDNAEVATIKDGKIEGKAAGTVTLIGKIKEGNVSASKADIRNKSVEYKLTVLDKVLVLIGPEDNLVVVTGEEKAMPSVKVVMENGDERETSDKITWEITGTNAVIKSGTSGKTVRGLVKGSASLKGTYANKTITIPVTIEQKITKLEVEPASLEMNIKASKSVKVTAYYSNGKSANFSNTINWESSNPAAATVKGASVKAVAEGTTTLTGSYQGINVSLKVNVIPKLTKLTVNESRLNMAPGGKQTVVVTALYDTGKTADVTGLITWTNSKPSVAKLSSGSITALAKGSTSFKGKYNNKTVTISVKVK
>NZ_CP009241.1|WP_038595449.1|5845773_5846763_+|Na/Pi-cotransporter-family-protein
MIRDLLFPIIYGLVIFLAGMKLMEAALSRLAGPLLSRGLHKATSTPVKGLISSSLLSALLQSSTAVTVLTIGMVNAGLITYARTLGIILGSNIGTCLTTELIGLQISTMATPLLAASLCVWAAAVMIGELPPYSWRAAGACRKFSGPLQFISLAVAGFALVLWGIAVMQSISPALQASGLFRWFLGHAATSALWGLAAGACLTAMLHSSAAVIGMAMGLASTGVMPPELGIAIVLGANVGTCVTAVIAAIGGSPSGVFVAWSHVALNVGGALLFLPFIGPLQSLAAWIGGGPAAQLAHAQTIFNVVCSLGALPLCYLPLWSRLESRLQP
>NZ_CP009241.1|WP_038595447.1|5844274_5845675_-|class-I-SAM-dependent-rRNA-methyltransferase
MASVILERNRKKRLEQGHPWVYASEVASVDGDPQAGGLVDVLNHQGRFLGAGYYNPASQIRVRILCQSPLAVMDTAFFAERFSSCLQHRERFLPGADAYRLVYGEADFLPGLIVDRFGEILVVQLLTLGMDVRRAEIVEALVQVMNPRGIYERSDVSVRELEGLEQRTGVLYGECPRHITVSENGLKVIVDIEEGQKTGYFFDQRENRASIAPLIKGWGGRSGITLQEIETDEGLVQTLPVNKSGKPVTFPYWDGATVLECFAHTGSFTLHACKYGAKKVTCLDVSAHAIESAKANVELNGFTDRVEFVVDDAFAFLRNQVKGLEERTERANGAGEAKTGAKPAAKADTAKPMTAGGGRTWDVVILDPPAFAKTKSAVAGACRGYKDINLHGMKLVNEGGYLVTASCSYHMQPQLFLDTIAEAAKDAGKVLRLIEWRAAGKDHPQILGVDEGHYLKFAIFEVRSKK
>NZ_CP009241.1|WP_038595446.1|5840350_5843872_-|helicase-exonuclease-AddAB-subunit-AddB
MTVNFLIGRSGSGKTTRIWETVSSKLESEPLGAPIIVLVPEQGSFGAERGLLAAGSVKGSIRAQTLSFSRLAFRVKQETGGSASLPISEEGKKMLIYKIINRRKEELKLFGASSDRPGFVERLSALHTELKRCCLGASDLEGQLARMREAIGSSPILAGKLDDLHIVFSELEQEMSQLYIDQEDRLAELAEHIADSSYIREAEIWVDGFHGFTPQEFMVLRELMQHASRVTVALTLDRIYPTGLQPHELELFHPSAVTYIKLRGMAEELGLEVWDELLAPPVLPRFAGSPALAHLERGFHRRSRWSGDIGQAAEAITISAAVSHRTEVEGTLREMIRLARDEGAEYGEMAVFMRNISDYEQLITPLFQDYSVPFFLDQKVNELHHPLVEFVRSALDVVRRRWRYEDVFRCVKTELLLPLDGSITREDMDALENYVLACGIHGYRWTDGRSWKGIPSLSLEGSRIVDEELLLKMERCRECITGPLYAFEKRIKKSRSGLELCTAVYLLLRESDTARKLEKLSREALELGQPERAREHSQLWDAVLDLLDQIAEMMGSERMEFELFAGVLETGLSELKMGLVPPALDQVLVGSMDRTRVSGVKYAFLLGFNEGVVPAQFKEDGILSEGERLLLENSGMELAPGSSRKLLDERFLIYGALTTASTRLWISYATADDEGKALLPSEIIRQLHGMFPDALQERSLSGFPAAVSPDEADAGEALHLGFVGHPGQSLRMLIMQLRQWRQGVEIPGLWWDVYNWFAEDEHWSPKLQQLLGSLFYRNDGIPLKRETSLRLYGGRTLRGSVSRMEKFVACSFSHFASYGLRLKERQLYKLQAPDIGQLFHAALSDMAKRLQEQGRGWGSLTAEECRREAGETVDRLSPLLQGEILMSSKRYGYISRKLKNIVGRASVILGEHARRGSFEPVGLELDFGPGKDLPPLRITLPNGCVMEVVGRIDRVDMAEGEHGVLLRVIDYKSSQKDLKLHEVYYGLSLQMLTYLDVLLTYSEQWLGKAALPAGTLYFHVHDPLLSSPNGLNREQAEQELLKRFKMKGLLTADREVVSLMDTTLDKGHSSIVPVALKSDGSFYSSASVATPEQWGHLLSSVRSNISDIGTRITEGDVAIQPYRIQQETACTFCSFRPVCQFDEAVEGNGYNNLAKPGKDVIWDLLSHKGGEKP
>NZ_CP009241.1|WP_038595444.1|5836172_5840354_-|UvrD-helicase-domain-containing-protein
MSIRAEIEAKPEGSLWSDDQWRAIAESGEDILVAAAAGSGKTAVLVERIIRKISNEENGFSVDRLLVATFTKAAASEMRQRIREALERKLEEQEGAEEGGAVGNDYLRRQLALLGRASITTLHSFCLEVIRRYYQQIPIDPGFRILNEHEAEMMRQELLEELLEEKYGEVSEDGEDGIFVKLADWFSGERTDDAVHALVQRLHDFARSHPWPAQWLRDTAADFSLPDTEALSRTAWVQSILAEAKLTLDGAASQLIQGHEIALQPGGPAPYAENLTADLEMVRALQDDLLNKPWAELYNIFIEISFGKLKACKKDATDPGLQETVKELRDNVKKSLLELQKSLFGRPAEVFLAELHEAAPLMQELAETVIEFGERYLIEKAGRGLVDFSDLEHYCLQILRHPDSAPGHSLPSDAAMEYREQFDEVLLDEYQDTNSVQEEIVRLISRESPGNRFMVGDMKQSIYRFRLAEPGLFLDKYLSFGASNNGAGREGILGDEKEQGGAAAARGSVIDLARNFRSRMEVVNAVNMIFRQIMNRTVAEISYDERAELVYGANFPGAEENRPDTYFAPELLLIDRGTAPAGRMEEAAEDGELPPQESEAIESETAQLEARAIARRISQMTGMTGGAPLLIYDKSLRIMRPVVYGDIVILLRSARIWTPLMIEELRLEGIPAYGDQNKGYFQATEVEIALSLLQVVDNPRQDIPLAGVLRSPVVNLSEEELAMVRLCSPGSFYDALMAAAGDSAAGSTGEVTMAEQELTAAAEVAAAVSPLNNVSAASAEEFEPGGVTGALQLGGAGWGADEAAVSQIPPALRKKLQAFTALLEGWRNAARQGSLSALIWRIYGESGYLEWVGGLPGGFQRQNNLKALYDRAVQFEKDTSARGLFRFLVFISRLRENGGDLGVAGGSGEEAGGVRIMTIHKSKGLEFPVVFLAGMAKPFNRQDLYSPFLMHKELGFGPRFVERETRVSYPTLPYLAINRRSRLELLAEEMRVLYVGLTRPRDKMILVGTVRDLPRAVSGWTGMQGREELLLADHLLARGRSYLDWVGPALIRHPGAAILRKLAGAEGTVSTVLHGDASNWSISVLAASGLGSGSFTGTADDAAKSEERRLVQDALRTGSALRSLGTPDETEISGRLKWEYPYAAASGIPAKTSVTELKAMLSMEEQPSYDLLEEGYSASRGNGSGRSTALAESLHLRRPKFMEKRGLSKAERGTAYHTVMQHVPLDRPVDRAVLEAVMAHLTRVAILNGEQAEAVDLAEVEAFYAGELGQRLLGASWKRREQPFSYMVPAGEAYRGLDYFDRTNLSMDNGRRTIDEAVLIQGVVDCLFREEGRLILLDYKSDAVLEHEGGLDGLKEKYRFQLELYSKALNDILGEPVSEIWLYFFDGGHAVKL
>NZ_CP009241.1|WP_038595441.1|5834878_5836060_-|exonuclease-SbcCD-subunit-D
MRILHTGDWHLGRTLEGRSRQKEQEQFMDELVEIADDSKADLILMAGDVYDSVNPPAAAEQLFYDAAARLTANGRPLVVISGNHDQPERVASVSPLVRRQGITLVGLPTSEPVTVHAVRTGEIAKIAALPYPSEARLGELLAGDSGEDELRLAYSARVGKLMKLLGREFTPQTVNLAMSHIYVLGGVESDSERPIQVGGAYTVDPSALSCGAQYTALGHLHRAQRVKGEGMIRYSGSPLAYSFSEAGQAKSVTMIDVAPGGEPSFEEIYLRCGRPLVNWKSSGGLQEVYGWLDEGRDASAFIDLELRLSEAMSMNDIQRLRKSREGIIHIRPIYPQMELELEEISRSRMPVQELFRKFYQRQTGGAEPEDSLIELFLELTEEERRQPEEGEEN
>NZ_CP009241.1|WP_038595460.1|5853659_5854238_-|DNA-3-methyladenine-glycosylase-I
MNEIRCDWVNEDPLYIAYHDEEWGKPLYDDRKLFELLMLEGMQAGLSWYTVLKKREHFRKVFDEFDPVKIAEYDEAKITALLGDPGIIRNRLKINAIIRNAALYLQIVQEEGGFADYLWSFTGGVPVINNWKSRAEVPITTPQSDQMSKALRKKGMKFVGSTICYAFMQASGMVDDHIQECFCRSKSQLSGS
>NZ_CP009241.1|WP_081965930.1|5854642_5856331_-|DUF4179-domain-containing-protein
MQRQGRRFCMKSVEDALKLRLNNDHGMEYPDFASMWERMEQAGHTGESDSKRARGRSVQRQGRNLRKSVVALSLAALLAAAPVYAAIQVDWNGLLHGKSGIQAALSEHLGQELEQSVTRDGVTLTLHTAVVDENRTVILYSLNPGEHNRAEFMKFKGISLRDEQGKLSEGILRDMVWDAGSGRYTGYVESNWTPEGDTAKVEFIARDLQSFTRQEQELEVDNTTRETQSFNIAQDGLQALHVQMFPREDNRLLVYSEITFEQDEAAAWAKPQVVAYRDGAVVKELTDSLQVRPGDNGEYISQQFYRHSDVSDESTAYRLQYMKEEERLDGKWSFDLNLSKKQMNTGTAKYALNKPLETSSDDITLEQMVVTPTQIRISYRTREAYAHLPYEKITLEVQGMSLKGELWPTAERDPNKGEIRFERPLGLVMNGKTPVTLTGKYKITNHKGERTPIRLTAISGKRQSVTSQVGGYPVEWIYYTLDGDLYVETGSQTPGFGGIVSFETTRNNSYFAGETLIANYSGDDDNTAIKRYEGYEQTKASMYVSGYITVEPDQMIQVQLLP
>NZ_CP009241.1|WP_063848056.1|5856263_5856824_-|RNA-polymerase-sigma-factor
MQSHRELFEAYNKAVYRTCYYMLHDAADAEDLCQEVFITVFRSRWQEVEHVRAWIMKITVNTCLNHLKRRRSLQQKVAEHMHLLKGRAETPVELLIEEKETALEWSSYMSRLPAKIRAVLTLRYMHDFSLAEIAEALSIPVGTAKSRQHKGLKMMKKMLQEAGEHAEAGEEVLYEIGGRCAETALK
>NZ_CP009241.1|WP_038595464.1|5857153_5859586_-|EAL-domain-containing-protein
MEHIYGTHDRVLVLFSYVIAVAASYTVLSLAGAVGRSKGKKRWLWLMCGAVIMGVGIWSTHFVGMLAISLPFQVAYNLNTVLLSVGVSVVASFIALVVISRCKQGILQFLGAGVFSAFGISAIHYIGMSAMQINVTYTPGYVVLSIVIAFVASYAALGLFSYIIDHGEEDNHWRKLGSGLIMGTAIVGMHYTGMLAVHFEPRHHTARITGVVLDQKWLAYVIAGGTLFTLWLSVVGMFISRRFSNKDTEILVTEKWYRSLYENNQDGIISIDLDMRIIGFNPAASRITGISSSAFKDQNMMFILSIVAVEEQERMQTLFSRSFAGEELSYETAIIHQDGHRVEISVVNAPVMVDGHVVGTYVIARDVTEEKRAKEKNHYLAFHDELTGLPNRRMFNELLSQTIEAHSETMEPFAVMVMDLDRFKIINDSLGHMYGDLFLQEMSSRIRHSVVNENVTLARIGGDEFAMLCRFSRKNMNVTAIAEQMVAAIEQPYRLKEQDFYVTVSIGIAFFPCHGQDEVQLLKNADTAMYEVKKNGKNDYQFFSDDLDEQLLQRIEMEGDLRKALERGEFILYYQPQIRADNNQIIGVEALIRWQHPDKGLLPPGLFISHAEETGQIVELGNWVLREACRQMRLWQDAGGPLIPVAVNLSSQQFHQYNLHGEIMGILEESGLAPQYLELEITESMMMNASASAGILSNLTRNGIRISLDDFGTGYSSFSYLKLYPIHKVKIDRSFIKDIVASSDDRAIVSTIITMARHLNMQVIAEGIETKEQLDIVVESGCIKVQGYYYSRPLPADEIGRLFLNLVQSV
>NZ_CP009241.1|WP_038595467.1|5860042_5861221_-|sn-glycerol-1-phosphate-dehydrogenase
MSSILDNIKAAATEIEGGAAFALPQVIHVEPGALQQVIPYVAAQGWERPVLVADEHTLKVAGASLELACREAGISVHTTLVLPNAQGDVIADEASVVQVLLDIQKVKADSVIVAGSGTLHDVARYAAYTAAIPFVSVPTAPSVDGFTSNGSPLIIRGNKITIPAAGPVAIFADTELLRKAPAPMVAAGFGDMLGKYTSLFDWKFGRLTADEPYAPAVAAITEKALLACVNHAEEIGNHTELGIRVLTEALIESGLAILLFGQSHSASGAEHHLSHYWEMEYIRTGRRQLLHGAKVGVACAEISALYHELADTQGLADKEQWAQVLKEISGLPSPEMLRGLLRTVHGPSTLEELGVDAGLLRRSLQEAHFIRMNRHTLLRARNEGKIAGAAAE
>NZ_CP009241.1|WP_038595469.1|5861363_5862854_-|L-arabinose-isomerase
MLSIKPYQFWFVTGSQHLYGPETIEEVAEHSRQITAGLNSDDAVPFEIVFKPVLTTADEIRKLAIAANSDENCGGIITWMHTFSPAKMWIAGLSQLRKPLLHLATQFNRDIPWDSIDMDFMNTNQSAHGDREYGFIGARMGIARKVVVGYWEDSEVRGRIGGWMNTAAAFNESQTLKVARFGDNMRSVAVTEGDKVEAQIKLGWTVDGYGVGDLVERVDAVTEAQIDDLMAEYAKAYDFAQGGDQDGPVRESIRYQARIELGMKAFLEEGGYTAFITTFEDLHGLKQLPGLAVQRLMEQGYGFAGEGDWKTAALVRLMKIIAGNKGTSFMEDYTYHLDPANELVLGSHMLEVCPTIAVDKPKLEVHPLGIGGKEDPARMVFNGRSGAALNASIIDMGNRFRLLVNEVEGVEPTEAMPNLPVARVLWKVQPSLKAGVEAWILAGGAHHTGFSYVVTTEQLIDFAEMVGIECVVIDKDTNTRSFRNELRLNDIAWKLL
>NZ_CP009241.1|WP_038595471.1|5862934_5864608_-|ribulokinase
MSKKYAIGVDYGTQSGRAVLVDLADGTEVADHVTPYPHHVIDEILPGTGKKLEYDWALQHPADYIEVLKRSVPEVIRESGIDPADVVGLGIDFTACTMLPVNEQGQPLCLLPEYQENPHSWTKLWKHHAAQHEANEINRIAAERGEKWLPRYGGKISSEWMMAKVWQILDEAPEIYDAADQFLEATDWVISQMTGNIVRNSCTAGYKAIWHKADGYPDKEFFKALDPRLENLTETKLRGDIVPLGTKAGELTAEMAQQIGLVAGTAVAVGNVDAHAAVPAVGVVTPGKLVMSMGTSICHMVLGDTEREVEGMCGVVEDGIIPGYYGYEAGQSAVGDIFEWYVEEAVPAYAKEAAAEEGVNIHTWLEARAAAYKPGQTGLLALDWWNGNRSVLVDTNLTGLLLGCTLLTKPEEIYRTLLEATAFGTRKIVDAFHGNGVAVDVLYACGGLPQKNRLLMQIYADVTNREIKVAASKQTPALGAAMFGAVAAGAQKGGYDSIVEAAEKMARIREESYVPIPENVAVYEKLYQEYSRLHDYFGRGENNVMKHLKAIKEDVTE
>NZ_CP009241.1|WP_038595473.1|5864635_5865325_-|L-ribulose-5-phosphate-4-epimerase
MLEQLKQEVLEANLDLPRYNLVTFTWGNVSGIDRDKGLVVIKPSGVEYDKLRRDDMVVLDLEGNIVEGSYRPSSDTATHLVLYKAFPNIGGIVHTHSPWATGWAQAGRGIPALGTTHADYYYGEVPCTRPMTDEEIKGAYELETGNVIVETFKDLNPDMIPGVLVHCHAPFNWGKDPHNAVHNAVVLEEVAKMATQTFQLNPNVQPMSQTLLDRHFLRKHGANAYYGQS
>NZ_CP009241.1|WP_038595475.1|5865536_5866550_-|iron-ABC-transporter-permease
MKQRAYTVSRGIGLCLLLVVLVILIVVIGMNSGQMNLSPMEVLRVLLLKGTDKQNLIVFEFRLPRIVLCILVGIGMGVAGSIMQSLLRNDMASPGTLGISSGSGLFVLIYIAIFSVKGVSSAIALPVLAFIGGMTAAVLIFLLSYRRGREISPTGLILTGVAMSSGYGALSLMITLRLDHTQFEFAQRWMAGSLWGDDWKYISVLAPWTVLLVGYAVYKSRVLNTLNLGNETATGLGLAVKPEFLGLTLASVALSSGSVALGGNFFFVGLISPHLARKLVGPNHKLLLPASALTGTLVVLIADTITRTVSFGTDIPTGIIITMLSTPYFLYLLARSE
>NZ_CP009241.1|WP_081966238.1|5866546_5867578_-|iron-ABC-transporter-permease
MKDVDTDTYGKKRGVSFSLLMAAGFLALVLIVAASISFGSADMQLHTAWAAIFKFDPAKTEHQIIHNLRFPRTIADVIVGCSLAMTGAIMQGTTRNPLADSGLMGISSGAGLAMALCMAFLPDRTYAQTMLYACLGAGAATGLTYGVASLSKRGMTPQRLVLAGMSVSMLFAAFSSFVAIKYNIGQALTFWTAGGTASTTWKELSIISPLFAVGVLAAIALAPSVTLLSLGDDVASGLGLPTGRIKGISTLIVLVLTGLSVLIVGPISFVGLIIPHVVRYMAGVDYRYIIPLSGLYGATFMVGADLFGRLINRPNETPVGIIFAIIGVPVFLYLSRRQKGELG

Crispr_ID: NZ_CP009241_22

• CRISPR_ID: NZ_CP009241_22
• CRISPR_location: 7420484-7420571
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_22

Consensus_repeat	Method
AGTTTTGTGAGCATTTCTTCACTG	CRISPRCasFinder

spacers of NZ_CP009241_22

>22.1|7420508|40|NZ_CP009241|CRISPRCasFinder
AGTTTACTTCGTACAAAACTTGCTTCGAAAGCATACGCTT

CRISPR arrays and Neighbor proteins around NZ_CP009241_22

CRISPR arrays

The CRISPR arrays of NZ_CP009241_22

>merge|NZ_CP009241|22|7420484-7420571|CRISPRCasFinder
AGTTTTGTGAGCATTTCTTCACTGAGTTTACTTCGTACAAAACTTGCTTCGAAAGCATACGCTTAGTTTTGTGAGCGTTTCTTCACTG

>NZ_CP009241|22|20|7420484-7420571|CRISPRCasFinder
AGTTTTGTGAGCATTTCTTCACTG	AGTTTACTTCGTACAAAACTTGCTTCGAAAGCATACGCTT
AGTTTTGTGAGCGTTTCTTCACTG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038597876.1|7412558_7413281_-|hypothetical-protein	unknown	unknown	gnl|CDD|224117
NZ_CP009241.1|WP_038597900.1|7428661_7429333_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038597881.1|7413977_7414952_-|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl|CDD|187540
NZ_CP009241.1|WP_038597886.1|7419630_7420467_-|EcsC-family-protein	unknown	unknown	gnl|CDD|378945
NZ_CP009241.1|WP_038597874.1|7411251_7412553_-|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl|CDD|213022
NZ_CP009241.1|WP_081966046.1|7417118_7418588_-|nitric-oxide-synthase-oxygenase	unknown	unknown	gnl|CDD|376957
NZ_CP009241.1|WP_038597894.1|7425767_7426574_-|MerR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|133378
NZ_CP009241.1|WP_038601120.1|7415996_7416545_-|TetR-family-transcriptional-regulator	unknown	unknown	gnl|CDD|366102
NZ_CP009241.1|WP_038597888.1|7420839_7421121_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038597898.1|7427979_7428570_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038597904.1|7429944_7430757_-|hypothetical-protein	unknown	unknown	gnl|CDD|143475
NZ_CP009241.1|WP_038597892.1|7423579_7425568_-|FAD-binding-protein	unknown	unknown	gnl|CDD|273816
NZ_CP009241.1|WP_038597905.1|7430760_7431450_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_156130974.1|7415625_7415841_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038597896.1|7426778_7427867_+|GIY-YIG-nuclease-family-protein	unknown	unknown	gnl|CDD|223399
NZ_CP009241.1|WP_038601125.1|7421200_7422613_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038597890.1|7422684_7423380_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038597883.1|7418889_7419159_+|hypothetical-protein	unknown	unknown	gnl|CDD|378504
NZ_CP009241.1|WP_038597884.1|7419195_7419507_+|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl|CDD|224278
NZ_CP009241.1|WP_038597878.1|7413518_7413875_-|nucleotide-excision-repair-endonuclease	unknown	unknown	gnl|CDD|198381

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038597876.1|7412558_7413281_-|hypothetical-protein	gnl|CDD|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0.000238603
NZ_CP009241.1|WP_038597881.1|7413977_7414952_-|NAD-dependent-epimerase/dehydratase-family-protein	gnl|CDD|187540	cd05229, SDR_a3, atypical (a) SDRs, subgroup 3. These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	2.83659e-98
NZ_CP009241.1|WP_038597886.1|7419630_7420467_-|EcsC-family-protein	gnl|CDD|378945	pfam12787, EcsC, EcsC protein family. Proteins in this family are related to EcsC from B. subtilis. This protein is found in an operon with EcsA and EcsB which are components of an ABC transport system. The function of this protein is unknown.	4.72589e-78
NZ_CP009241.1|WP_038597874.1|7411251_7412553_-|polysaccharide-deacetylase-family-protein	gnl|CDD|213022	cd10917, CE4_NodB_like_6s_7s, Catalytic NodB homology domain of rhizobial NodB-like proteins. This family belongs to the large and functionally diverse carbohydrate esterase 4 (CE4) superfamily, whose members show strong sequence similarity with some variability due to their distinct carbohydrate substrates. It includes many rhizobial NodB chitooligosaccharide N-deacetylase (EC 3.5.1.-)-like proteins, mainly from bacteria and eukaryotes, such as chitin deacetylases (EC 3.5.1.41), bacterial peptidoglycan N-acetylglucosamine deacetylases (EC 3.5.1.-), and acetylxylan esterases (EC 3.1.1.72), which catalyze the N- or O-deacetylation of substrates such as acetylated chitin, peptidoglycan, and acetylated xylan. All members of this family contain a catalytic NodB homology domain with the same overall topology and a deformed (beta/alpha)8 barrel fold with 6- or 7 strands. Their catalytic activity is dependent on the presence of a divalent cation, preferably cobalt or zinc, and they employ a conserved His-His-Asp zinc-binding triad closely associated with the conserved catalytic base (aspartic acid) and acid (histidine) to carry out acid/base catalysis. Several family members show diversity both in metal ion specificities and in the residues that coordinate the metal.	4.52109e-53
NZ_CP009241.1|WP_081966046.1|7417118_7418588_-|nitric-oxide-synthase-oxygenase	gnl|CDD|376957	pfam02898, NO_synthase, Nitric oxide synthase, oxygenase domain.	0
NZ_CP009241.1|WP_038597894.1|7425767_7426574_-|MerR-family-transcriptional-regulator	gnl|CDD|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.51913e-17
NZ_CP009241.1|WP_038601120.1|7415996_7416545_-|TetR-family-transcriptional-regulator	gnl|CDD|366102	pfam00440, TetR_N, Bacterial regulatory proteins, tetR family.	3.03334e-11
NZ_CP009241.1|WP_038597904.1|7429944_7430757_-|hypothetical-protein	gnl|CDD|143475	cd06567, Peptidase_S41, C-terminal processing peptidase family S41. Peptidase family S41 (C-terminal processing peptidase or CTPase family) contains very different subfamilies; it includes photosystem II D1 C-terminal processing protease (CTPase), interphotoreceptor retinoid-binding protein IRBP and tricorn protease (TRI). CTPase and TRI both contain the PDZ domain while IRBP, although being very similar to the tail-specific protease domain, lacks the PDZ insertion domain and hydrolytic activity. These serine proteases have distinctly different active sites: in CTPase, the active site consists of a serine/lysine catalytic dyad while in tricorn core protease, it is a tetrad (serine, histidine, serine, glutamate). CPases with different substrate specificities in different species include processing of D1 protein of the photosystem II reaction center in higher plants and cleavage of a peptide of 11 residues from the precursor form of penicillin-binding protein; and others such as tricorn protease (TRI) act as a carboxypeptidase, involved in the degradation of proteasomal products. CTPase homolog IRBP, secreted by photoreceptors into the interphotoreceptor matrix, having arisen in the early evolution of the vertebrate eye, promotes the release of all-trans retinol from photoreceptors and facilitates its delivery to the retinal pigment epithelium.	1.52819e-21
NZ_CP009241.1|WP_038597892.1|7423579_7425568_-|FAD-binding-protein	gnl|CDD|273816	TIGR01813, Fumarate_reductase_flavoprotein_subunit, flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport].	2.16015e-32
NZ_CP009241.1|WP_038597896.1|7426778_7427867_+|GIY-YIG-nuclease-family-protein	gnl|CDD|223399	COG0322, UvrC, Nuclease subunit of the excinuclease complex [DNA replication, recombination, and repair].	1.58827e-66
NZ_CP009241.1|WP_038597883.1|7418889_7419159_+|hypothetical-protein	gnl|CDD|378504	pfam10882, bPH_5, Bacterial PH domain. This family of proteins with unknown function appear to be related to bacterial PH domains. This family was formerly known as DUF2679.	0.00027566
NZ_CP009241.1|WP_038597884.1|7419195_7419507_+|antibiotic-biosynthesis-monooxygenase	gnl|CDD|224278	COG1359, COG1359, Uncharacterized conserved protein [Function unknown].	1.22779e-12
NZ_CP009241.1|WP_038597878.1|7413518_7413875_-|nucleotide-excision-repair-endonuclease	gnl|CDD|198381	cd10434, GIY-YIG_UvrC_Cho, Catalytic GIY-YIG domain of nucleotide excision repair endonucleases UvrC, Cho, and similar proteins. UvrC is essential for nucleotide excision repair (NER). The N-terminal catalytic GIY-YIG domain of UvrC (also known as Uri domain) is responsible for the 3' incision reaction and the C-terminal half of UvrC, consisting of an UvrB-binding domain (UvrBb), EndoV-like nuclease domain and a helix-hairpin-helix (HhH) DNA-binding domain, contains the residues involved in 5' incision. The N- and C-terminal regions are joined by a common Cys-rich domain containing four conserved Cys residues. Besides UvrC, protein Cho (UvrC homolog) serves as a second endonuclease in E. coli NER. Cho contains GIY-YIG motif followed by a Cys-rich region and shares sequence homology with the N-terminal half of UvrC. It is capable of incising the DNA at the 3' side of a lesion in the presence of the UvrA and UvrB proteins during NER. The C-terminal half of Cho is a unique uncharacterized domain, which is distinct from that of UvrC. Moreover, unlike UvrC, Cho does not require the UvrC-binding domain of UvrB for the 3' incision reaction, which might cause the shift in incision position and the difference in incision efficiencies between Cho and UvrC on different damaged substrates. Due to this, the range of NER in E. coli can be broadened by combining action of Cho and UvrC. This family also includes many uncharacterized epsilon proofreading subunits of DNA polymerase III, which have an additional N-terminal ExoIII domain and a 3'-5' exonuclease domain homolog, fused to an UvrC-like region or a Cho-like region. The UvrC-like region includes a GIY-YIG motif, followed by a Cys-rich region, and an UvrB-binding domain (UvrBb), but lacks the EndoV-like nuclease domain and the helix-hairpin-helix (HhH) DNA-binding domain. The Cho-like region consists of a GIY-YIG motif, followed by the Cys-rich region, and the unique uncharacterized domain presenting in the C-terminal half of Cho. Some family members may not carry the Cys-rich region. This family also includes a specific Cho-like protein from G. violaceus, which possesses only UvrBb domain at the C-terminus, but lacks the additional N-terminal ExoIII domain. The oother two remote homologs of UvrC, Bacillus-I and -II, are included in this family as well. Both of them contain a GIY-YIG domain, but no Cys-rich region. Moreover, the whole C-terminal region of Bacillus-I is replaces by an unknown domain, and Bacillus-II possesses another unknown N-terminal extension.	3.20852e-16

Protein sequences

>NZ_CP009241.1|WP_038597886.1|7419630_7420467_-|EcsC-family-protein
MPETAEGLPRFETAAELQAALAVIVKWEKEQNKLMIWDRITRLPFKLLDKITPKVIHEKLGKLLDELGSYIQNGGNYLVAGRKVGSLLESSSRAAGGSEKGPFPLAVMDEAALKLSQSSRNVATAQGATTGFGGFFTLAADIPAILGLSLKVIQEIGLCYGYNPTDKAERIFTVKVMQFASSDIVGKRTILQELNLQAGGNGDITAGTNAAVSKIQGWKEVITVYRDNWGWKKMLQAVPVAGMFFGAYLNRKALEDVAEAARMLYRKRRIIARLAEME
>NZ_CP009241.1|WP_038597884.1|7419195_7419507_+|antibiotic-biosynthesis-monooxygenase
MSKYGMYAKFTAQPGKRDALAKILLESAAAAETVEECELYIINFSETEPDILWVTEVWSNPEAHAASLSLEATKAAIQRAMPLIAGVESTKLKPVGGKGLSFN
>NZ_CP009241.1|WP_038597883.1|7418889_7419159_+|hypothetical-protein
MLGINVTQSDENLVIKWQLSKFEIPLSEIVEVTQDDTYGGSEKNAIRIGTPYGTTDRVVIKTQSIIYILFTSDAAAIIKKIEDLGNSES
>NZ_CP009241.1|WP_081966046.1|7417118_7418588_-|nitric-oxide-synthase-oxygenase
MGNNDCGVLREDLIDQAESFIRLCYGELEKSEPEIFERMSAIREEVLQSGTYRHTEEELTHGARMAWRHNSRCIGRLFWHSLEVIDARGKETAEEVAEALLAHMERANNGGRIRPVMTVFRSGEDPAKVIRIWNHQLIRYAGYPGNAEDPRAGDPASDAFTSLCRKLGWQGTGGDFDLLPLVISIGDEQPCLFPIPKGIVQEVPLTHPEIERFPELGLRWYSVPIVSDMQLEIGGIRYTAAPFNGWYMETEIGSRNLGDTVRYNRLPAVADLLGLDRSTNTSLWKDRALLELNRAVLHSYKLAGVSIVDHHTAADQFVRFQEQEKQRGREVSGKWHWLIPPMSPSATPIWNDNKLKELNLSPRLVYQSSAYTGWLEEADGIQKGVLEDVQEGALEGTREGAQGVALEGTREGMQEGTQEGAQEGTRGGTYEGALKGAREGAQEGRRDGAGHTSSAAAAGLDIMEHQREETPAEPGHAAAEIACPFHHQQ
>NZ_CP009241.1|WP_038601120.1|7415996_7416545_-|TetR-family-transcriptional-regulator
MNKQSSTVRSKTAEATSVNRREQILEAAVVVFAELGYYRATTAQVAERVGISQPYIFKLFKNKEELFVAALDRAFERIIRTFKSVEAPADQLLEETIRVYEQLMETHPNEILLQVQALGIRDEMILHAMQKGMLEVTSLVMGKFVAAGMEHPEVEVSTFMANGMLCNIAMALGMPELKPKHL
>NZ_CP009241.1|WP_156130974.1|7415625_7415841_+|hypothetical-protein
MRSALRRFGLAIGYEIGVTAIRISDSIRLALRRFGLAVGYQIGVTAIRVLNHIAIRHTVGDYCLAIDYLTS
>NZ_CP009241.1|WP_038597881.1|7413977_7414952_-|NAD-dependent-epimerase/dehydratase-family-protein
MLNKAVVLGATGGTGMVIIAELLKRGVETVAFGRSLPKLEQLAAKLGNPTGLRLKTGDVFKAGDVQEAGQGGDVIFHCASVPYHEMSTKLLPMGEAVLEAASKLGTRVVAVDGIYPYGKRRNEQPISEDYPKNPHTKKGKVKLEFERMFFSPRWNRAKRMIVRLPDYYGPTANEASYLGSTLEAIAAGKPAMFIGNMSVPREYVYLPDAAVMMVELAGREEAYGQNWNIPGAGIISGKEIVRIAQAASGSSKPVIPVGAAGLSLLGLFIPVMKEIVEMLYLTKEPLILSGSKYERTVGPIPATPFEQGITETIRVLKARQDKSL
>NZ_CP009241.1|WP_038597878.1|7413518_7413875_-|nucleotide-excision-repair-endonuclease
MISITIPAPDVTITKQENPVLSHIYGFTDFHLITREAGGIFMFYNDNDELLFVGKARKLRPRIKKHFEDNVSVMKPHRDEVTKIEVCLVEDPVDREIYETYIVNKLKAKYNVEKVLYK
>NZ_CP009241.1|WP_038597876.1|7412558_7413281_-|hypothetical-protein
MAAPFFKKRDAVDKTPKPGMVQKVQLAESPPEDSESYEKSDSQNSLISTGKAQLDKKSLDLIFAVEQMIQDRTHAETNNRELQDRLAHSSGHVERLNKDLKNLNKVIEDREKNIMELEQKLVERNLKVDQVLEDYRELHITFSAEMDELKSTIDLEQQKYVNLVQKHNEVHAEKLKKMNELEEKIGRLETENGHLRQKYETVRQEKAYLSSMISDFTNRMTAPFGGSSLPAERSDENGDT
>NZ_CP009241.1|WP_038597874.1|7411251_7412553_-|polysaccharide-deacetylase-family-protein
MPVEEKSAALMIELLSLEHGQDGYRMEVGLTRSGAFTRHMVHIDELTYLQMNALPPFEGQRIRLSLYAKWDPFRQTHFSSLIKMNQTFSETLYFACSEEYISLLHRLKQPEWAGAEQVKDKEKEEAAVIPSPAVAAVPKPVKRSSSRAGARSIALRGLVLSLLLIVFLLRMDDGLFSDSAEAKVEVTQSEAGAHSSERDDTLSAPYAPVVRLTSLESSIAEAATVPVVDEKEVQKLLYEEIELGGDSYEYALPKGYVALSFDDGPSKYTKEIVDILQAEGIAANFLFIGQNVLHYPEAVIYADAQGMAVGNHSWDHSVMTRNSGEENRNNLSQVNHALAQLIKSPVTVFRPPYGAVNEELAAEVGRQHMKVLLWNRDPEDWKADSPEEILHYFRATDPSGGIYLLHEKNITVKILPEIIQYLKSKGLKFAIFK
>NZ_CP009241.1|WP_038597888.1|7420839_7421121_-|hypothetical-protein
MRHYESSLRTNSTVDQAQDSVTKLHNSVTQALSHPNEQTLAQAENSLEHAENAVQHAPEGSVGGHGVDLTEERLKDEKERLAALEVQQSQIKD
>NZ_CP009241.1|WP_038601125.1|7421200_7422613_-|hypothetical-protein
MSIQLSAVHWVYLVFIVFIMTLLIRRRDTTMICVTGIFALGLLATSTLSGSVSGIFNSFVYATKELMSTIMIISIIVAMSRILMVTGINETMVAPLTRFLRTPAMAYWGIGLIMMVTSLFFWPSPAVALVGAVLLPVAVRVGLPALGAAMAMNLFGHGIALSGDYIIQGAPKLTADAAGLPVSSVMEASLPLVIVMGLVTTVTAFWMMRRDQRNGTWRDGLVSVKGSSGPLSAGAEDTAPVLMSPGLKKGLAIAIPLLFLLDVVAMFILDLQGGDATALVGGTAVLILITITLLAHHNQGLEKITSYLIEGFVFGFKVFGPVIPIAAFFYLGDSAFTELFGNTLPGGSHGIVNDLGVALADHVPLNGAVGAVTLTVIGAITGLDGSGFSGISLVGPIAQMFAAAIHSGAATLTALGQVAAIWVGGGTLIPWALIPAAAICGVSPFELARRNLKPVLLGLSATTIVAMFLM
>NZ_CP009241.1|WP_038597890.1|7422684_7423380_-|hypothetical-protein
MNISISRVQRSSIKRPPQSKIRDTAAAPSLGFSETLASVTAMTEEQAQKIRDIYDFTVSIETIPADDKDITKRGTSGSLQEVVVAPNILHLMSKDPSIKKKVYGYIDSYIHEDLKSLAQMEELHGVTVTGHSLIIHKDGTYTVWSASVASPGEVEKGRRIEADKLKEKAEQAHIAAVARNESELVMPEGCGKQPVTQPGEPALPAAIRALSSRDLLKLSLLIRNSKSDKRQ
>NZ_CP009241.1|WP_038597892.1|7423579_7425568_-|FAD-binding-protein
MRKLSITKMFMLSLCLVMILSIIGGCSGNSSEPAASEQPSASPEATQPTADSGEIPASFKAGTYKAEADGKDGKVQVEVTLDAAQKITDIQVVSQNETAGIGVEAINKVKEEIIAGQTLAIDAVSGASESSTAILTAVEDALKQAGGNVEAFKSRTVAKAGEGKTEQLAADVVVVGAGASGVSAAVSAADKGAKVIIIEKTATIGGASNLSWAGKFYNSSAAVSSGLKISVEKEISDWIVNNHWRVDAAAIRQYVTKSGDTYDWLNQKGYKTTFINFAGEQLHMLPAYETRQDLLRAMLAESVEKKGGQVITETTAKKLITGSNGEVTGVVAEKADGTTLEITGKSIVMATGGYAANKEMVKEAFGFEGVNGGLGQNIGEGLEMSWAAGAKVPDNFGGQMLHQTLARATEKLKTQYEPFEASYPLMLSYLPNFMNVGSSGARFRDEAATLTAVAAANTSAFNGAYHYVIVSKSQIDALKAKGMNGVQAPSLPGMPPEFYATFAKQFTLENPWKDADKVFDSMVENGDGYKGSTIEELAKNAGMDAAVFAEAFSKYQEATKTGVDTEFGKAKDYLLPMGESGPYYAIIAEINNLGSVGGLLVNTQFQVLNDKRVPVKGLYAVGLESEGVLFNDTYVGNGVGIGYSFTSGRLGGEDAASSALEK
>NZ_CP009241.1|WP_038597894.1|7425767_7426574_-|MerR-family-transcriptional-regulator
MKYSIGEFASILGITADTLRLYEKHDIVRPMKDHHNNYRYFDDLDARNLLSSRWYRSMQIPLQDVAELINDAPSEQVVESIAAAQLQLEAEIRRSTMLLNKINEIHKELKVISHSFYKCRIKQLPGIYRIQQTNKNHLLQKDCLKRTVQAWMELLPFTFYSFRIENTESIYGSAELDYSWGLALLEEDQEKLEVGLNESVEYLQPATCISSVIATSCEEYIERSAFQFMLDYAEEHRYAITGDIIGKILFTERRSGTNKTYLEINIPI
>NZ_CP009241.1|WP_038597896.1|7426778_7427867_+|GIY-YIG-nuclease-family-protein
MNLTEKVAALPLSPGVYLMKDSLGHIIYVGKAKQLRKRVQSYFYNSKGHSPKVNRLVSNIRDLEYRVTDTEFEAFMLECQLIKEIKPMYNKKMKNPLAYTYITIRNDTAYRQLEVGYDPGQAENSLSFGPFTSRSTVERAVQGIKECQKILCSSPHAQRTLCLNHSLGLCIGMCGGGEALEKYNGIIDRIIALLNGEDTGILEDLERRMDEAAERYDFEAAAKYRDYVGAVQSLLQKEKVTRFTSENQNIVVLEPVNEQLLKLILIKGSRILFRAKLETGHPDMAQLQAGIQSAIAETFTQLTPEPPEAVNRHKIDEAQIIYSYLKSNSGSYILVPQELLHPEHQSSLRGAVRELLENYFGL
>NZ_CP009241.1|WP_038597898.1|7427979_7428570_+|hypothetical-protein
MNLKRTYTLLTAALLLLVLAGCSSGNAEAVNMEPDTFSKQDMAIYKAVNSKERVSYGMSRKNAEKVLGTGNKGIPNSYTYDPGVSVIYRDDKVVSIALRKESQGVYRTARGAEAGMSHAGIKELYGEKYAIENAENYMDYYYDTETRQLVKSSVQELNSLSGEALRGIHMVSTVYDEEGKATIIILMDMQAATTMK
>NZ_CP009241.1|WP_038597900.1|7428661_7429333_+|hypothetical-protein
MSDFFQDFKLFESNAEEFHILTPEYIYSEIGKENEALVVQALARGEDFPAEVRHGKIFSIGDIESVSSNKKGMFTNIVTRSSFGKTETDFIVITDPDIREDFIRLLHIHMGSEYKFNKKQLTSVTASLKPLFYVLIILGVGAVMTQLSINAQTEPIEEGRILKARVRVLYYLLGLINPVWVMVFTGIALFIALVIVIRRIANPPHIIQIKPAKRRVAYLARFR
>NZ_CP009241.1|WP_038597904.1|7429944_7430757_-|hypothetical-protein
MLKLRSHRYIPKRLVEMLVEVYEEKELNLVMEDSYKEKKQALLNRRKISHLDFQQFVNSTTDSIYTQFNYFYPVKSFAKRKRMNEIKYDIKLHDILYIAFTSFNDESAAEIGSLLDKYAKMSYLILDLRNNSGGKLGACLKIARQLLPRCSMLILNYKEKQVIHQKINNEFYDFKKIFILVNPHTASCSEILALMLVQKLHNVHLIGEGTVKKTVTLHAVTNLKYHYHFSITDARWYVDHCDVHDLQSNIIPVETDGYMNQILKIIQGDD
>NZ_CP009241.1|WP_038597905.1|7430760_7431450_-|hypothetical-protein
MRALMWKKYSEFQRSKVRVLVFFILPVAYLFLLLILNIKTENVVAFYSLSVILLQTFVFFSIEELVSTEVILATNTSIKKIWLVNLVCTTVIGFIYSNIILWIAVLSGPFLFDIDFNITSQAILQNVLNIVVGASIIGFSTIHFADYSKLKQVLASAAGLLIYANPFLFLFYYGKGIEVSLQITAVSFVLSLFILLISYWIVNNPNKEKLIINTQKLLKTFEDSNTIEE

Crispr_ID: NZ_CP009241_23

• CRISPR_ID: NZ_CP009241_23
• CRISPR_location: 7655611-7655707
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP009241_23

Consensus_repeat	Method
TTTGTGAGCATTCACTTCGTTGATTCTGCTTCG	CRISPRCasFinder

spacers of NZ_CP009241_23

>23.1|7655644|31|NZ_CP009241|CRISPRCasFinder
AACAAAACTAGCTTCGGAAGCATCCGCTTCG

CRISPR arrays and Neighbor proteins around NZ_CP009241_23

CRISPR arrays

The CRISPR arrays of NZ_CP009241_23

>merge|NZ_CP009241|23|7655611-7655707|CRISPRCasFinder
TTTGTGAGCATTCACTTCGTTGATTCTGCTTCGAACAAAACTAGCTTCGGAAGCATCCGCTTCGTTTGTGAGCATTCACTTCGTTGATTCTGCTTCG

>NZ_CP009241|23|21|7655611-7655707|CRISPRCasFinder
TTTGTGAGCATTCACTTCGTTGATTCTGCTTCG	AACAAAACTAGCTTCGGAAGCATCCGCTTCG
TTTGTGAGCATTCACTTCGTTGATTCTGCTTCG

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009241.1|WP_038598206.1|7646808_7648572_-|thiol-reductant-ABC-exporter-subunit-CydD	unknown	unknown	gnl|CDD|227321
NZ_CP009241.1|WP_038598226.1|7658841_7659573_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP009241.1|WP_038598230.1|7661638_7662283_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_019914582.1|7651635_7651836_-|cold-shock-protein	unknown	unknown	gnl|CDD|224197
NZ_CP009241.1|WP_038598228.1|7659755_7661309_-|M23-family-metallopeptidase	unknown	unknown	gnl|CDD|223810
NZ_CP009241.1|WP_038598208.1|7648571_7649588_-|cytochrome-d-ubiquinol-oxidase-subunit-II	unknown	unknown	gnl|CDD|129307
NZ_CP009241.1|WP_038598234.1|7663958_7665320_-|replicative-DNA-helicase	unknown	unknown	gnl|CDD|180232
NZ_CP009241.1|WP_038598214.1|7652224_7653472_-|PDZ-domain-containing-protein	unknown	unknown	gnl|CDD|273938
NZ_CP009241.1|WP_038598218.1|7654023_7654830_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293819
NZ_CP009241.1|WP_038598241.1|7667782_7668700_-|DUF2232-domain-containing-protein	unknown	unknown	gnl|CDD|370773
NZ_CP009241.1|WP_038598220.1|7654848_7655592_-|hypothetical-protein	unknown	unknown	gnl|CDD|378229
NZ_CP009241.1|WP_038598232.1|7662458_7663745_-|adenylosuccinate-synthase	unknown	unknown	gnl|CDD|234904
NZ_CP009241.1|WP_038598222.1|7655735_7657013_-|hypothetical-protein	unknown	unknown	gnl|CDD|369363
NZ_CP009241.1|WP_038598238.1|7665764_7667771_-|DHH-family-phosphoesterase	unknown	unknown	gnl|CDD|226404
NZ_CP009241.1|WP_038598216.1|7653848_7654055_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP009241.1|WP_038598236.1|7665321_7665768_-|50S-ribosomal-protein-L9	unknown	unknown	gnl|CDD|234659
NZ_CP009241.1|WP_038598210.1|7649574_7650978_-|cytochrome-ubiquinol-oxidase-subunit-I	unknown	unknown	gnl|CDD|376587
NZ_CP009241.1|WP_038598204.1|7645012_7646812_-|thiol-reductant-ABC-exporter-subunit-CydC	unknown	unknown	gnl|CDD|227320
NZ_CP009241.1|WP_038598212.1|7651202_7651433_-|hypothetical-protein	unknown	unknown	gnl|CDD|372943
NZ_CP009241.1|WP_038598224.1|7657009_7658842_-|cell-wall-metabolism-sensor-histidine-kinase-WalK	unknown	unknown	gnl|CDD|380161

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP009241.1|WP_038598206.1|7646808_7648572_-|thiol-reductant-ABC-exporter-subunit-CydD	gnl|CDD|227321	COG4988, CydD, ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_CP009241.1|WP_038598226.1|7658841_7659573_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.65843e-92
NZ_CP009241.1|WP_019914582.1|7651635_7651836_-|cold-shock-protein	gnl|CDD|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.52544e-32
NZ_CP009241.1|WP_038598228.1|7659755_7661309_-|M23-family-metallopeptidase	gnl|CDD|223810	COG0739, NlpD, Membrane proteins related to metalloendopeptidases [Cell envelope biogenesis, outer membrane].	3.75712e-43
NZ_CP009241.1|WP_038598232.1|7662458_7663745_-|adenylosuccinate-synthase	gnl|CDD|234904	PRK01117, PRK01117, adenylosuccinate synthetase; Provisional.	0
NZ_CP009241.1|WP_038598234.1|7663958_7665320_-|replicative-DNA-helicase	gnl|CDD|180232	PRK05748, PRK05748, replicative DNA helicase; Provisional.	0
NZ_CP009241.1|WP_038598214.1|7652224_7653472_-|PDZ-domain-containing-protein	gnl|CDD|273938	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures. [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides].	1.2354e-77
NZ_CP009241.1|WP_038598218.1|7654023_7654830_-|MBL-fold-metallo-hydrolase	gnl|CDD|293819	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YycJ protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	9.77625e-54
NZ_CP009241.1|WP_038598241.1|7667782_7668700_-|DUF2232-domain-containing-protein	gnl|CDD|370773	pfam09991, DUF2232, Predicted membrane protein (DUF2232). This family of bacterial proteins are multi-pass membrane proteins with up to 10 (2 x 4/5) transmembrane regions. The exact function of this potential pore molecule is not known, but in many instances it is associated with ABC-transporter-like domains, implying that it is part of a secretion system that uses energy.	5.93266e-23
NZ_CP009241.1|WP_038598220.1|7654848_7655592_-|hypothetical-protein	gnl|CDD|378229	pfam09648, YycI, YycH protein. This domain is exclusively found in YycI proteins in the low GC content Gram positive species. These two domains share the same structural fold with domains two and three of YycH pfam07435. Both, YycH and YycI are always found in pair on the chromosome, downstream of the essential histidine kinase YycG. Additionally, both proteins share a function in regulating the YycG kinase with which they appear to form a ternary complex. Lastly, the two proteins always contain an N-terminal transmembrane helix and are localized to the periplasmic space as shown by PhoA fusion studies.	1.1899e-09
NZ_CP009241.1|WP_038598222.1|7655735_7657013_-|hypothetical-protein	gnl|CDD|369363	pfam07435, YycH, YycH protein. This family contains the bacterial protein YycH which is approximately 450 residues long. YycH plays a role in signal transduction and is found immediately downstream of the essential histidine kinase YycG. YycG forms a two component system together with its cognate response regulator YycF. PhoA fusion studies have shown that YycH is transported across the cytoplasmic protein. It is postulated that YycH functions as an antagonist to YycG. The molecule is made up of three domains, and has a novel three-dimensional structure. The N-terminal domain features a calcium binding site and the central domain contains two conserved loop regions.	3.82317e-31
NZ_CP009241.1|WP_038598238.1|7665764_7667771_-|DHH-family-phosphoesterase	gnl|CDD|226404	COG3887, COG3887, Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms].	0
NZ_CP009241.1|WP_038598208.1|7648571_7649588_-|cytochrome-d-ubiquinol-oxidase-subunit-II	gnl|CDD|129307	TIGR00203, ubiquinol_oxidase_subunit_2, cytochrome d oxidase, subunit II (cydB). part of a two component cytochrome D terminal complex. Terminal reaction in the aerobic respiratory chain. [Energy metabolism, Electron transport].	7.07719e-115
NZ_CP009241.1|WP_038598236.1|7665321_7665768_-|50S-ribosomal-protein-L9	gnl|CDD|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	1.10198e-62
NZ_CP009241.1|WP_038598210.1|7649574_7650978_-|cytochrome-ubiquinol-oxidase-subunit-I	gnl|CDD|376587	pfam01654, Cyt_bd_oxida_I, Cytochrome bd terminal oxidase subunit I. This family are the alternative oxidases found in many bacteria which oxidize ubiquinol and reduce oxygen as part of the electron transport chain. This family is the subunit I of the oxidase E. coli has two copies of the oxidase, bo and bd', both of which are represented here In some nitrogen fixing bacteria, e.g. Klebsiella pneumoniae this oxidase is responsible for removing oxygen in microaerobic conditions, making the oxidase required for nitrogen fixation. This subunit binds a single b-haem, through ligands at His186 and Met393 (using SW:P11026 numbering). In addition His19 is a ligand for the haem b found in subunit II.	0
NZ_CP009241.1|WP_038598204.1|7645012_7646812_-|thiol-reductant-ABC-exporter-subunit-CydC	gnl|CDD|227320	COG4987, CydC, ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones].	0
NZ_CP009241.1|WP_038598212.1|7651202_7651433_-|hypothetical-protein	gnl|CDD|372943	pfam14169, YdjO, Cold-inducible protein YdjO. This family includes the B. subtilis YdjO protein, which is functionally uncharacterized. This is not a homolog of E. coli YdjO. B. subtilis YdjO is cold-inducible. Its expression is induced by the extracytoplasmic function sigma factor sigma-W. This family of proteins is found in bacteria. Proteins in this family are approximately 60 amino acids in length.	3.73377e-33
NZ_CP009241.1|WP_038598224.1|7657009_7658842_-|cell-wall-metabolism-sensor-histidine-kinase-WalK	gnl|CDD|380161	NF033092, HK_WalK, cell wall metabolism sensor histidine kinase WalK. This model describes WalK as found in Staphylococcus aureus (sp|Q2G2U4.1|WALK_STAA8). A shorter version, as found in Streptococcus pneumoniae, called WalK(Spn) or VicK, is not included. WalK is part of a two-component system and works with partner protein WalR.	0

Protein sequences

>NZ_CP009241.1|WP_038598220.1|7654848_7655592_-|hypothetical-protein
MDWGRAKNVLIYAFLVLNLLLCYQLWMDLRDQASANLDFTSLSAETQAVMEQKGIRVLCPIPAATPQLPDITYRYSGEEQNEEPVELKVPIDSKLIYSSFAELSSSLADQITDIANYRFDSQESEVGKFVLHPLVDHKWSLFRVRLELINSDQKIVAYRWPKIEIGATSSDEDIQKVLPASQALSSLIEKYFPADSVVKEIELGYYGELFNSESQVASPMWRFMLENGNAYYVDAISADIISPKTTE
>NZ_CP009241.1|WP_038598218.1|7654023_7654830_-|MBL-fold-metallo-hydrolase
MGISFTVLSSGSTGNVTVVRNGETALMIDAGLSAKRIDELLAMREMTGKEIDGILVTHEHSDHIKGLGAMARKYDLPIYANSNTWGAIEKGIGTIAEHNRIIMETGQHRDFGSLRVESFAISHDAAEPVGYNFYDGKEKLCVATDLGYVSDKVRTAIADSDVLVLEANHDIEMLRMGRYPWNTKRRILGDLGHLSNEAAGAALSEILTGRTKRTYLAHLSRDHNMMDLAKMSVRGAMEDRGCFFRDSEFRLCDTYYDQPTPWDKVSQS
>NZ_CP009241.1|WP_038598216.1|7653848_7654055_+|hypothetical-protein
MESFSTSMDLVQFIGKLGDLKDEHYHLILVQSAMIELLIDKGLFSRQELERKITEVDQLMTGSPYPTA
>NZ_CP009241.1|WP_038598214.1|7652224_7653472_-|PDZ-domain-containing-protein
MGLFDDDFYSTKVPRREGRGQEPSKVLTSRNWSARKSRRSLATWQVSVISSVISAVVAVLLFSLATGQLTQEKAEQPKVIEKVTASSGDPYERIVQAAALVRPAVVSIINHKEDNKELNILDESALGSGVIYKKDDNKAFIITNNHVIEGFGKLEVVTVDGETRKATLVGTDKVSDIAVLSIDAKGITTVAQIGDSSKLRFGETVIAIGNPLGLGDSLTSGIVSYTERTIPVSLNQDGVYDWEQEVIQTDAAINEGNSGGALVDLNGKVIGINTMKISDTGVEGLGFAIPANHVMETAGELEANGKIARSYLGVYSVDLNNPYVPLAEDQRKELNLPTTVKDGVVVLDAVGPAKDAGLQFNDVITKFDNEPITSTLSLRKYLYDHTKIGDDLKITYYRNGEVKQVTVKLLEKQKE
>NZ_CP009241.1|WP_019914582.1|7651635_7651836_-|cold-shock-protein
MQTGTVKWFNAEKGFGFIEVEGGSDVFVHFSAITGDGFKTLDEGQRVEFNVVQGNRGPQAENVVKL
>NZ_CP009241.1|WP_038598212.1|7651202_7651433_-|hypothetical-protein
MNYRKKPLEEVPEENTAIWACTNDGCNGWMRDNFAFEHAPSCRLCHAPMVRSMKMLPQLLNSNGDLKSLKKGISIT
>NZ_CP009241.1|WP_038598210.1|7649574_7650978_-|cytochrome-ubiquinol-oxidase-subunit-I
MDTVMLSRIQFASTTIFHYFFVPVSIGLALLIAIMETMYVRKGNDEYKRMAQFWGKLFLINFAVGVVTGILQEFQFGMNWSDYSRFVGDVFGAPLAIEALLAFFLESTFIGLWIFGWDKVSKKIHLLSIWMVALGTMLSAFWILAANSFMQHPVGFAMNNGRAEMNDFLALITNGQLLVEFPHTVLAAYATGAFLVTGISAYKMLKKQDVPFFRKSFEIAAIVGIVSSMGVAVAGHAQAQYLVETQPMKMAATEALWEDSGDPAAWTASAFIDPDNKSNSGEIKIPYMLSFLSYSKFSGEVKGMNTLQAEYEQKYGPGDYIPPVRTTFWSFRIMVVAGTLMIVLGMYAMYLMWRKKMERPNTWFMRFMFWGLLLPPIANTAGWIMTEIGRQPWTVFGLMTTEDSVSPNISAGQVLFSVISFTAIYAILGAVLIGLFIKVIKKGPYAMDNDHGESHDPYSKEGSHAFS
>NZ_CP009241.1|WP_038598208.1|7648571_7649588_-|cytochrome-d-ubiquinol-oxidase-subunit-II
MLSLNELWFVLIAVLFIGFFFLEGFDFGVGMETQFLAKNDTERRVLINSIGPFWDANEVWLLTGAGAMFAAFPNWYATLFSGFYIPFVFALLALIARGVAFEFRGKRDSLAWKRTWDACIFFGSFLPPFLLAVVFASFIKGLPIDGDMQMYAGFFDIVNVYTVVAGITVVLLCLVHGLMFTTLRTVGDLQVRARKLAQKLLFPLAALLVAFVIMTYYMTDVFEQRGALLLVLVILGIAAFVLSGYFMTKKKDSWAFGMTGAVMALSVMSIFVGLFPRVMISSIDEAFNLTITNAASGQYSLKVMSIVALTLLPFVLGYQIWSYFIFHKRVHEKEHLEY
>NZ_CP009241.1|WP_038598206.1|7646808_7648572_-|thiol-reductant-ABC-exporter-subunit-CydD
MDKNLLGYKGVKPVFLIVGFLTLVQSLSILLLAKSLAEVVSALFAGEPLKEQGATMLLFLLAFLVRHACAMLMSRVSYRFAENTGSSMRRQMMDKLFQLGPRLAGDRGTGNLVTLVLEGVTKFRTYIELIIPRMVGMAVTPVLLLVYIYTLDTSSGVILTLTMPIIIVFMILIGMTARKQMDRQLKSYRTLSNHFVDSLRGLETLKFLGRSRSHSDSIAEVSDRYRSATMRTLRVAFLSSFAMDFFTMLSVASVAVSLGLRLVNEQMTLVTGLTILILAPEYFLPVRLVGADFHATLDGKEAGEAMKDIIDRDTVTAEVLEAGGTETSTAAPSPAAVFTWRQDSVLKLEQVGVKYEADGIASLEGVNLEFKGSAKIGIIGESGAGKSTLVDILGGFLHPTSGSISINGNRVSALTDEEWRKQTSYIPQRPYIFSGTLADNVRFYYPEASTEAVASVMAAAGLSKLVESLPSGLDEMIGGGGRSLSGGQEQRVALARALLSSRPVMLLDEPTAHLDIETEYELKQTMLPLFAGKLVFLATHRLHWMIDMDLIVVMQQGQVAEVGTHPELVARRGAYYELIQSQLEGIH
>NZ_CP009241.1|WP_038598204.1|7645012_7646812_-|thiol-reductant-ABC-exporter-subunit-CydC
MKREGWFAPYVSPYFWRFLLIIVLGALTIFSASSLMYTSGFLISKASIPPENILMIYVPIVGVRTFGTSRAVIHYAERLVSHDTILRILSKMRIRLYNILEPQALFLSSRFRTGDILGMLADDIEYLQNVYLRTVFPSIIALLIYAAAVISIGTFDVAFALLMGLYMLVLVVVLPLISLLLTQKRQRQVKQERNRLYQKLTDAVLGMGDWVISGRQGQFVETYEADERAVAHTDGALRRWARLRMFIGQAVVGIGVLSMLYWAAGQFADGAIAGTLIAAFVLVVFPVADAFLPVSEAVEKIPQYRNSLERLSGVEAAEGSMAGAAPDSGKADTARHVDAAVKAIKETGLAPIRLENAGYRYAAGDDWSIRNLTLDIPQGRKIAVIGRSGAGKSTLLKVIQGVISPSVGSATIKGIEASAYGERIPQLIAVLNQSPHLFDTTVANNIRLGNPDASDEDIKQAAKLAKLDTLISSLPEGYNTAVREAGQRFSGGERQRIALARILLQNTPVVVLDEPTVGLDPRTERDLLATMFEAMEGKTLIWVTHHLVGAEQMDEVIFMENGFVEMRGTHAELMDKEPRYRKLYELDRPSGFVNTAAGE
>NZ_CP009241.1|WP_038598222.1|7655735_7657013_-|hypothetical-protein
MKETIKSWILALLVCGSLVESYYLIYRLPGSDSAVMSENLYVKTDNMGPEEKVENLLYPDKMIIHMGEDKHTLFYPGSTFYDLIMNRLKGRGFESFQRRSVQDFDWDKIRSENSGIELSFGAGIPVTLLQRVMQLAPDSLFQGESIDRIWIYNVKNDSKAHAVFFSTRGDIVYEAAKADLTVQDVQQHVDFGMNWTPYTAVNGDYYVPEEKISLVEVEIPSGMYTIEQMQNNLFFDAGSTRYIPEKDGSKIYTDSKRSLQVDQEQNWMSYSDPAALPAGESTPAKDALEAVDFVNKHGGWNGTYRLASTEEGNQERTVSFQQYYGSYPIMSKPKLQYGAINLELQQGTVSSYERSLMYTEEGKAVKQIVELPGGDELRAKLAQFSEASPVKDLTPAYVASVNGEKLKLLPVWRVTLRDGTFLTLN
>NZ_CP009241.1|WP_038598224.1|7657009_7658842_-|cell-wall-metabolism-sensor-histidine-kinase-WalK
MKGRSFFRTIQAKLIIIYVLLILIAMQLIGVYFVSSMKNSLTDNFTKDLKARAEMLSILTADKLGSEAGTAGEETAVESLRGMVNNLYISGAEIQVLDASGKIITTSVPSQNDYVGQRNTQTVVSRALQGISDNEEYIIADDNVRKKVVAKPVLSGDKVVGAIYIAADMKDLYATMSRINSVFLSGLLLALALTAVLCVILAHTITHPIKEMTRHATAVAEGRFNRKMPVFGNDEIGQLSQAFNYMTGRLREALSQNEEEKEKLASILTNMSDGVVATDESGVVILMNTRAADMLGAEGPLPEGAPLDELLGLDHEQSGSLAQGNAQSAMLHLSPMGGGDPNIVRVTFTPIHRREGGGIAGTIAVLQDVTEQENLEESRREFVANVSHELRTPLTTIKSYVEALDDGALDDPQLAARFVGVIRNETERMIRLVTDLLHLSRLDSRESSLRIQQTDISEMLEDVADRFSFQIRQKRIHISTRVRKEVATAWLDRDQIDQVLGNLVSNALKYTPEGGTIQLEALKTEDGMLAVSVRDSGIGIPKKDIERIFERFYRVDKARSRNMGGTGLGLSIAREIVKAHGGSISLQSELNEGSLVTFTLPLKEQRGSVL
>NZ_CP009241.1|WP_038598226.1|7658841_7659573_-|response-regulator-transcription-factor
MQMGTILVVDDEQPIADILKFNLEKEGYEVICAFDGNSAVELALSRRPDLMLLDLMLPGKDGMDVCREVRSAHLDIPIIMLTAKDGEIDKVLGLELGADDYVTKPFSTRELLARVKAQMRRQHKPSPSEMLSERAESKQGVNHFGLFVDTDMYMVYKDGEPLDLTHREYELLYYMIRHAGKVMTREHLLQAVWGFEYFGDVRTVDVTIRRLREKIEENPSKPEYIFTRRGLGYLMHSPKSGGL
>NZ_CP009241.1|WP_038598228.1|7659755_7661309_-|M23-family-metallopeptidase
MKGFKFMRGMGKLRDKAETSAEFSAESQKGSCASSETNVFYQETKPRRFRRSWIAASAGLVLLATFSIGVEKKYVTANTVTYYKVLVKGEEIGKISEETELDRLFEEKQQEYQLKYPDSVMVLQTSGITTEAEKAYKPEIDSAATLDKLDGMLKAYAVGVQLTVDGKAVGIVKDQETANAVLQSVKEHYVPVAAVSTGTQLKRTAATRSAKAAAPANADKVESVAIQEDVAVVPVKADPTQVLSVEEAVEVLTEGKEEPLVYAVQEGDTVSGIAKRFEITQADIFRNNPSVKELTLQIGDELQLTVPQPELTVVTVEQVSEQLVTEPEVIVRKSDELAAGKSKVVRAGQTGLKQMQYRVTKENGLVVKEEWMGQTVLKASLPEVVYRGTKVVGEGTGMFAWPVSRASLSSSFGQRWGRSHKGVDLVSGNRTITAADAGTVTFAGVQSGYGNVVIVDHKNGYVTYYGHLRSISVSVGQRLEQGAGIGVMGNTGRSTGTHLHFEIRKNGTAVNPLRYLK
>NZ_CP009241.1|WP_038598230.1|7661638_7662283_-|hypothetical-protein
MKIVRRALGVCLIVVLASALSVLTTAFVVNTYIQSVLASFDIKLEGPSPGIGGFIKSLTGMGATDNAKNVAEDVKDAPGAKKDSKSETVDTPEQKTEKSVEEKVPEDALAVMGEASGEEEQSDSALDQQLVMTPEAMGELKDSLPMDEKSNIFNILMTKLPQEEMQKISTAMEDGLTENEVKELQQVIAKYVNPDEYDTLMKMLTPNSTESTTN
>NZ_CP009241.1|WP_038598232.1|7662458_7663745_-|adenylosuccinate-synthase
MSTVVVVGTQWGDEGKGKITDFLAESADVVARYQGGNNAGHTILIDGKKFKLSLIPSGVFYKEKTCVIGNGMVINPEALIQEINYIHENGFDTKNLVISDRAHVIMPYHMLLDALEEDRKGPNKIGTTRKGIGPAYMDKAARNGIRIADLMDAEEFELRLRQLMEEKNQVITQVYGAEALNVEEILVKYLEYAEVLRGYVTDTSVVLNDAIDADSRVLFEGAQGVMLDIDQGTYPFVTSSNPSAGGVCIGSGVGPSKIKQVIGVAKAYTTRVGDGPFPTELNDATGDYIRETGHEYGTVTGRARRVGWFDSVVVRHARRVSGITGLSLNSLDVLSGLETVKICTGYKFRGEVITHYPASLKMLAECEAVYEELPGWSEDITGAKTLEDLPANTRRYVERVSELTGIPIAIFSVGRNREQTNQVLPIYI
>NZ_CP009241.1|WP_038598234.1|7663958_7665320_-|replicative-DNA-helicase
MGGDLFFDRIPPQNLEAEQAVIGAVLLQDEALVTAMERVNTEDFYDKPHQMIFEAMVQLGEESQPIDLVTLTSRLQDKGQLEDIGGVSYLAKLAHAVPTAANVEYYAQIIEEKAMLRRLIRTATQIVSEGYTGGEDVADMLSDAERRILEISNRRSGSGFIAIRDVLMQVFDRVELLHQNKGGTSGIPTGFADLDHMTNGFQRNDLIIVAARPSVGKTAFALNIAQNVAVRAKETVAIFSLEMSAPQLVQRMICAEANLDANIMRTGDFKSDDDWSKLTMGIQSLSEAEIYIDDTPGITVTDIRAKCRRLKKEKGLGMIVIDYLQLIQGRGKGGENRQQEVSEISRTLKQIARELDVPVIALSQLSRGVEQRQDKRPMMSDLRESGSIEQDADIVAFLYRDDYYNQDTEKKNIIEIIIAKQRNGPVGTVELVFLKNFNKFVNYERAHSEPFAG
>NZ_CP009241.1|WP_038598236.1|7665321_7665768_-|50S-ribosomal-protein-L9
MKVIFIKDVKGQGKKGQVKEVSEGYAANFLLPRGLVRPATDGNVKTLENQAAAEQRRKDQEKEEAQQLGKKLDELTLTLKAKSGEGGRLFGAITSKQIAETLVETQGIVIDKRKIELSDPIRHVGTFQVSVKLHTEVKANLTVQVTEE
>NZ_CP009241.1|WP_038598238.1|7665764_7667771_-|DHH-family-phosphoesterase
MPKFLQRRWHGYHTVWAFLLLLVLIIVVSIYNWALGIASLFLAGTLCFSMLQAEISFRRNLVEYINGLSFRIKRVEGEAVSMLPLGIILYSEDRTVEWNNRNAGDIFSRKSLVGEALQELLPEMMSSLTGNVPVKRDPAKEGVLKDIRQEISVDDRYYQVVAIPSERLLYLYDITELVVLRERYEEEKLAIGIVMMDNLDEAAQGMDDQQRTSLIAKVASEITEWSKQFEVYLRRLSSERYLMLLNHRSLQALEESRFVVLDEVREMTADLKVPMTLSIGLAYGSESASELGALAQSSLDMALGRGGDQAAVKAGQRLSFYGGKSNAAEKRTRVRARVIAHALRDLMQESDRVLIMGHRVPDIDAVGAAIGLLKAAQMYNVEANIVMETPNPSITRMMEQIRRDDELYKTFVTTEQALQMMTEHTLLIVVDTHKASMTMEPRLVQYASRIVVVDHHRRGEEFINDAVLVYLEPYASSTCELVTELLQYIHDKIKLSPLEATMLLAGITVDTKHFALHTGSRTFEAAGFLRRIGADTILIQRMLKEDLQEYISKAEIIKHARMVYDHIALVVTSPGMKIPQLLIAQTADTLLGMTNVVASFVISERPDGLIGISARSLGRMNVQVVMEKLGGGGHLSNAAVQLEGTCKQAEARLMEVLAEIEAKEGLFE
>NZ_CP009241.1|WP_038598241.1|7667782_7668700_-|DUF2232-domain-containing-protein
MKFRWTSVAWSIVYLLLLLSLSTPLLIITTLFLIIPAVVLFTTLSTKQFIVHLLPVLLIVGLITPVYVVLALYFLIPAIVMGRWYKKRASALSTILAGTVTILGEFLLLLVIGTALFNFDLSSYVNDMMQMVTSPLSDLGTGNPLMTEFNLTSEDVNTISHMTIQVIPMTLILSSFMMAVITHSIVRPILNSMEYAVPKLKPAREWRLSRSFIWYYLLGVVINLLFGNSDNSFMLMISANLLPLLQIVFKIQTIGFLFFVVYERKWSKIVAILLALPVIWLPGLWIIGIIDMAFPLRELVKKSKR

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP009241_3	3.4|260641|18|NZ_CP009241|CRT	260641-260658	18	NZ_CP009241.1	260425-260442	1	0.944
NZ_CP009241_14	14.1|4441907|33|NZ_CP009241|CRISPRCasFinder	4441907-4441939	33	NZ_CP009241.1	460027-460059	1	0.97
NZ_CP009241_14	14.1|4441907|33|NZ_CP009241|CRISPRCasFinder	4441907-4441939	33	NZ_CP009241.1	421177-421209	2	0.939
NZ_CP009241_14	14.1|4441907|33|NZ_CP009241|CRISPRCasFinder	4441907-4441939	33	NZ_CP009241.1	459898-459930	2	0.939

1. spacer 3.4|260641|18|NZ_CP009241|CRT matches to position: 260425-260442, mismatch: 1, identity: 0.944

gctacgccaacggcagaa	CRISPR spacer
gcgacgccaacggcagaa	Protospacer
** ***************

2. spacer 14.1|4441907|33|NZ_CP009241|CRISPRCasFinder matches to position: 460027-460059, mismatch: 1, identity: 0.97

ttcgaacaaaactggcttcgaaagcatacgctt	CRISPR spacer
ttcgtacaaaactggcttcgaaagcatacgctt	Protospacer
**** ****************************

3. spacer 14.1|4441907|33|NZ_CP009241|CRISPRCasFinder matches to position: 421177-421209, mismatch: 2, identity: 0.939

ttcgaacaaaactggcttcgaaagcatacgctt	CRISPR spacer
ttcgtacaaaactgtcttcgaaagcatacgctt	Protospacer
**** ********* ******************

4. spacer 14.1|4441907|33|NZ_CP009241|CRISPRCasFinder matches to position: 459898-459930, mismatch: 2, identity: 0.939

ttcgaacaaaactggcttcgaaagcatacgctt	CRISPR spacer
ttcgtacaaaactggcttcgcaagcatacgctt	Protospacer
**** *************** ************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009241_12	12.2|3644895|25|NZ_CP009241|PILER-CR	3644895-3644919	25	KX455876	Aeromonas phage Ahp2, complete genome	32648-32672	4	0.84
NZ_CP009241_12	12.2|3644895|25|NZ_CP009241|PILER-CR	3644895-3644919	25	MH444512	Bifidobacterium phage Willi, complete genome	12062-12086	4	0.84
NZ_CP009241_12	12.2|3644895|25|NZ_CP009241|PILER-CR	3644895-3644919	25	MK932884	Bifidobacterium phage PMBT6, complete genome	12062-12086	4	0.84
NZ_CP009241_3	3.7|260749|33|NZ_CP009241|CRT	260749-260781	33	NZ_CP017910	Vibrio alginolyticus strain K06K5 plasmid pL29, complete sequence	17829-17861	7	0.788
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	900668-900726	8	0.864
NZ_CP009241_3	3.3|260593|30|NZ_CP009241|CRT	260593-260622	30	NZ_CP017076	Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence	594569-594598	8	0.733
NZ_CP009241_3	3.7|260749|33|NZ_CP009241|CRT	260749-260781	33	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	1614045-1614077	9	0.727
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1583788-1583846	11	0.814
NZ_CP009241_12	12.1|3644832|33|NZ_CP009241|PILER-CR	3644832-3644864	33	NZ_CP024310	Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence	122010-122042	11	0.667
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	1553592-1553650	12	0.797
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP054613	Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence	2547775-2547833	12	0.797
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP016544	Planococcus donghaensis strain DSM 22276 plasmid pPD76, complete sequence	7380-7438	13	0.78
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	484370-484428	13	0.78
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP033045	Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence	485380-485438	13	0.78
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP024037	Bacillus aryabhattai strain K13 plasmid unnamed2	9190-9248	16	0.729
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP026740	Bacillus megaterium strain YC4-R4 plasmid unnamed4	69535-69593	16	0.729
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP010587	Bacillus megaterium Q3 plasmid p1, complete sequence	2068-2126	16	0.729
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP023319	Bacillus megaterium strain A plasmid p2, complete sequence	553-611	16	0.729
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NC_017139	Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence	89-147	16	0.729
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	CP031730	Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence	312640-312698	17	0.712
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NC_004604	Bacillus megaterium QM B1551 plasmid pBM400, complete sequence	47657-47715	17	0.712
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	NZ_CP041068	Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence	37432-37490	17	0.712
NZ_CP009241_2	2.1|140442|59|NZ_CP009241|CRISPRCasFinder	140442-140500	59	CP041516	Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence	16630-16688	17	0.712

1. spacer 12.2|3644895|25|NZ_CP009241|PILER-CR matches to KX455876 (Aeromonas phage Ahp2, complete genome) position: , mismatch: 4, identity: 0.84

actgttcatcttggccatcatgtct	CRISPR spacer
cctgttcatctgcgccatcatgtca	Protospacer
 **********  *********** 

2. spacer 12.2|3644895|25|NZ_CP009241|PILER-CR matches to MH444512 (Bifidobacterium phage Willi, complete genome) position: , mismatch: 4, identity: 0.84

actgttcatcttggccatcatgtct	CRISPR spacer
cctgctcatcttggccatcaagtca	Protospacer
 ***.*************** *** 

3. spacer 12.2|3644895|25|NZ_CP009241|PILER-CR matches to MK932884 (Bifidobacterium phage PMBT6, complete genome) position: , mismatch: 4, identity: 0.84

actgttcatcttggccatcatgtct	CRISPR spacer
cctgctcatcttggccatcaagtca	Protospacer
 ***.*************** *** 

4. spacer 3.7|260749|33|NZ_CP009241|CRT matches to NZ_CP017910 (Vibrio alginolyticus strain K06K5 plasmid pL29, complete sequence) position: , mismatch: 7, identity: 0.788

gcagaaccaacggctacgccaacac--cggccacg	CRISPR spacer
ccagcaccaacggctgcgccaacacgtaggcga--	Protospacer
 *** **********.*********   *** *  

5. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.864

--gctaccatacaacccggaggcttagctcagctgggagagcatctgccttacaagcaga	CRISPR spacer
aaagtcgcttacaa--cggaggcttagctcagctgggagagcatctgccttacaagcaga	Protospacer
  . *  * *****  ********************************************

6. spacer 3.3|260593|30|NZ_CP009241|CRT matches to NZ_CP017076 (Novosphingobium resinovorum strain SA1 plasmid pSA1, complete sequence) position: , mismatch: 8, identity: 0.733

gcgacgccaacggtagaaccgacagctacg	CRISPR spacer
agatcgccaagggtagcaccgacagctggg	Protospacer
. . ****** ***** **********. *

7. spacer 3.7|260749|33|NZ_CP009241|CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.727

gcagaaccaacggctacgccaacaccggccacg	CRISPR spacer
tcaccgcctacggctacgccaacaacggccgga	Protospacer
 **  .** *************** *****. .

8. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 11, identity: 0.814

----gctaccatacaacccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
acgggtcaccat----catggaggcttagctcagctgggagagcatctgccttacaagca	Protospacer
    *..*****    * .*****************************************

9. spacer 12.1|3644832|33|NZ_CP009241|PILER-CR matches to NZ_CP024310 (Sinorhizobium fredii strain NXT3 plasmid pSfreNXT3c, complete sequence) position: , mismatch: 11, identity: 0.667

tccatgtccatcatgttcatttcagtcatcttc	CRISPR spacer
atgtggtcgatcatgttcagttcagtcatggct	Protospacer
 .   *** ********** *********  ..

10. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 12, identity: 0.797

----gctaccatacaacccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
acgggtcaccat----tatggaggcttagctcagctgggagagcatctgccttacaagca	Protospacer
    *..*****    . .*****************************************

11. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 12, identity: 0.797

----gctaccatacaacccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
acgggtcaccat----tatggaggcttagctcagctgggagagcatctgccttacaagca	Protospacer
    *..*****    . .*****************************************

12. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP016544 (Planococcus donghaensis strain DSM 22276 plasmid pPD76, complete sequence) position: , mismatch: 13, identity: 0.78

----gctaccatacaacccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
aggggtcaccat----tttggaggattagctcagctgggagagcatctgccttacaagca	Protospacer
    *..*****    ...***** ***********************************

13. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 13, identity: 0.78

-----gctaccatacaacccggaggcttagctcagctgggagagcatctgccttacaagc	CRISPR spacer
taggggtcaccata-----tggaggattagctcagctgggagagcatctgccttacaagc	Protospacer
     *..******     .***** **********************************

14. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 13, identity: 0.78

----gctaccatacaacccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
aggggtcac----caaaatggaggattagctcagctgggagagcatctgccttacaagca	Protospacer
    *..**    ***  .***** ***********************************

15. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 16, identity: 0.729

gctaccatacaa----cccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
----ttatatagattctttggaggattagctcagctgggagagcacctgccttacaagca	Protospacer
    ..***.*.    ...***** ********************.**************

16. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 16, identity: 0.729

gctaccatacaa----cccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
----ttatatagattctttggaggattagctcagctgggagagcacctgccttacaagca	Protospacer
    ..***.*.    ...***** ********************.**************

17. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 16, identity: 0.729

gctaccatacaa----cccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
----ttatatagattctttggaggattagctcagctgggagagcacctgccttacaagca	Protospacer
    ..***.*.    ...***** ********************.**************

18. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 16, identity: 0.729

gctaccatacaa----cccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
----ttatatagattctttggaggattagctcagctgggagagcacctgccttacaagca	Protospacer
    ..***.*.    ...***** ********************.**************

19. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 16, identity: 0.729

gctaccatacaa----cccggaggcttagctcagctgggagagcatctgccttacaagca	CRISPR spacer
----ttatatagattctttggaggattagctcagctgggagagcacctgccttacaagca	Protospacer
    ..***.*.    ...***** ********************.**************

20. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to CP031730 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence) position: , mismatch: 17, identity: 0.712

gctaccatacaacc-------cggaggcttagctcagctgggagagcatctgccttacaa	CRISPR spacer
-------tacacctgtttctatggaggattagctcagctgggagagcatctgccttacaa	Protospacer
       **** *.       .***** ********************************

21. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NC_004604 (Bacillus megaterium QM B1551 plasmid pBM400, complete sequence) position: , mismatch: 17, identity: 0.712

gctaccatacaa-----cccggaggcttagctcagctgggagagcatctgccttacaagc	CRISPR spacer
-----tatatagatttttttggaggattagctcagctgggagagcacctgccttacaagc	Protospacer
     .***.*.     ...***** ********************.*************

22. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to NZ_CP041068 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence) position: , mismatch: 17, identity: 0.712

gctaccatacaa-----cccggaggcttagctcagctgggagagcatctgccttacaagc	CRISPR spacer
-----tatatagatttttttggaggattagctcagctgggagagcacctgccttacaagc	Protospacer
     .***.*.     ...***** ********************.*************

23. spacer 2.1|140442|59|NZ_CP009241|CRISPRCasFinder matches to CP041516 (Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence) position: , mismatch: 17, identity: 0.712

gctaccatacaa-----cccggaggcttagctcagctgggagagcatctgccttacaagc	CRISPR spacer
-----tatatagatttttttggaggattagctcagctgggagagcacctgccttacaagc	Protospacer
     .***.*.     ...***** ********************.*************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	369227 : 378449	11	Paramecium_bursaria_Chlorella_virus(25.0%)	NA	NA
DBSCAN-SWA_2	710401 : 722277	9	Synechococcus_phage(37.5%)	NA	NA
DBSCAN-SWA_3	2353246 : 2373453	30	Paenibacillus_phage(25.0%)	portal,terminase,head,protease,coat,integrase,capsid	attL 2352951:2352964|attR 2366935:2366948
DBSCAN-SWA_4	2519674 : 2530049	9	Bacillus_phage(66.67%)	NA	NA
DBSCAN-SWA_5	4342809 : 4350390	10	Pneumococcus_phage(33.33%)	NA	NA
DBSCAN-SWA_6	5248697 : 5259182	11	Staphylococcus_phage(50.0%)	NA	NA
DBSCAN-SWA_7	5359515 : 5373155	10	Bacillus_phage(57.14%)	holin	NA
DBSCAN-SWA_8	5393397 : 5397682	12	Bacillus_phage(42.86%)	NA	NA
DBSCAN-SWA_9	5401341 : 5413870	23	Paenibacillus_phage(30.0%)	integrase	attL 5409073:5409086|attR 5414862:5414875
DBSCAN-SWA_10	6894158 : 6913707	20	Bacteriophage(50.0%)	plate,tail	NA
DBSCAN-SWA_11	7012528 : 7019414	6	Enterobacteria_phage(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP009241|369227:378449|DBSCAN-SWA
AATGTATCCTAAAGATTTGAACTATACAATGCCGGCGGAATGGGGCAAGCATGAGCGGACCTTCATCTCCTGGCCGGTTCAGGCGTCCATGGTTTTTCCGGACAACCATAAATCCGTTTGTGACGGCTATGCTGAAATCATCCGTGCCATCGCTGAGTTCGAGCCGGTTACCGTAGTTGTCAATCCGGACGATCTGGGGATGGTAGAGGAACTAGAACTCGGGGCGAATGTAACGCTGCTGCCGATCCGGCATAATGACGCCTGGCTGCGTGATAACGGGCCGACGTTTGTTCTAGGTGAAGACGGCGTGCTCGCCGGTGTGAACTGGAAATTTAACGCCTGGGGCGGCAAATATTCGCCGTGGGATCTGGATGATGAGGTGGCTCCGCAAATTCTGGAGCAGCTGAAGATGAAACGTTTTGACGCACCGCTGGTAATGGAAGGCGGCTCTATCCATACCGATGGTGAAGGCACACTGATCACCACGGAGGAATGTCTGCTGAACACGAACCGCAATCCGGAGCTGGACCGGGCAGACATTGAGGAATATGTACGGAAATATACCGGCACCGAGTCGATCATCTGGCTGAAGCGCGGCCTCAGCGGTGACGAGACTGACGGCCATGTAGATAATATTGCCTGCTTCGCCGCTCCGGGCAAAGTCATCATTCAGGTCTGCGGCGACCCGCAGGATGAGAACTTCGGCATCACTCAGGAGAATCTCCGTATTCTGGAGAATGCGGTGGATGCCAAAGGCCGGAAGCTGGAGATTATCCAGATTCAGCAACCACCCCGCGTGGACTATGAGGACAGCCGCCTGACGCTTAGCTATTTGAATTTCTATTTCGTCAACGGCGGCATTATACTGCCGGTATTCGGCGGGACGGCTTCCGAGACAGATCAGCTGGCGGAGCAGAGTCTGGCTGCCTTGTTCCCGGACCGCAGAATCCGTAAGGTGAACGGTATGGCGGTCATCGGCGAAGGCGGAAACGTACACTGCACGACCCAACAGATGCCTGCCACAAAGTAATTTACTCGCTAGGGAGGACAGAAGCATGAGAAAAGTAAAAGTAGCCGCTACACAAATGAGCTGTTCCGGCGACATTGATGAGAATATTCGCAAGGCTGACAGTCTGGTCAGAGAAGCAGCGGCTCAAGGCGCGCAGATTATTTTGCTGCAGGAGCTGTTCGAAACCCCTTATTTCTGCCAGAAGGAGAAATCTGATTATTACGTCTACGCCACTGAGCTAGAGCAGAATAAAGCAGTGAATCATTTCAAGGCTGTAGCCAAAGAGCTGCAAGTCGTGCTGCCGATCAGTTTCTACGAGAAAAAGAACTATGCCCGTTACAACTCGCTGGCGGTAATTGATGCCGACGGCACGGTGCTGGGCAAATACCGCAAGAGCCATATTCCTGACGGTCCCGGCTATGAAGAGAAATTCTATTTCAATCCGGGGGATACCGGGTTTAAGGTATGGAATACCCGCTATGCCAAGATCGGTGTCGGCGTCTGCTGGGACCAGTGGTACCCGGAAGCCGCCAGAGTCATGAGTCTAATGGGCGCGGAGATTCTGTTCTATCCGACAGCCATCGGTTCGGAACCGCAGGACGGATCCATTGATTCCAAAGATCACTGGCAGACCTGCATGCTGGGCCATGCGGCGGCGAATTTGATTCCTGTCGTGGCCTCCAACCGGATCGGCGAGGAAATTGATGAGGATTCCAGCATTAACTTCTACGGCTCCTCGTTCATTGCCGGCCCGCAGGGCAACAAAATCGTCGAAGCCGGGCGGGATGAGCAGACGGTACTGGTCAGCGAATTCGATCTGGATGCGTTGGAAGTGGGCCGGATTGAGTGGGGCATTTTCCGTGACCGCCGTCCGGAGCTGTACAGAATGATATCTTCGTATGATGGGGACTTAACCTTTTAAGGAATAATCGAACAGAAGTATATAACATGGAATAAGAGGGCACTGCCAGGGAGAATCATGATCTCTTGGCCGTGTCTTTTTTGCCCTTATGGCATGTTCATGGGAGATATGGGACTGTGTCTAGCGATAAATGTTACAATCTATGAATTTAGTGTTATATAACATTACATAATGGAGAAAAGTTAATTGTCATCACCACTGTGATCTGTTAAAATCTACTTAAGTATTTTACAAAATGAGTGGGGGATTGGAAAATGGGGATCAGAAAAAAGTGGGCAATGTCAGCTTTGGTGGCATTTTTGGTCTTGTCTATGGTGGGCTGTGGTTCCAACAATAACGCCAAAAGCGGAGATGCGGCAGAAGAGTCGATCAAATTCGCAAGTGACGCCAGCTACGCGCCAATGGAGTATATGGACACGGACACCATCAAGGGCTTTGACATTGATTTCATCAAGGCAGTTATGGAAGAAGCGGGTATCGATTATACAGTGACTAATACGGGATGGGACACGATGCTTTCCAGTGTGAAGCAGGGCACGGAATATCAGGCAGGTCTATCCTCGGTATCCATTACGGACGAACGCAAGGAAACCTATGACTACTCTATCCCCTACTTTGAATCCACTAATATGATTATGGTTAAAGAGGGCAGTGACATTAAGAATGCGCTGGACCTGAAAGATAAAACCGTAGCGGTACAAGGGGCTACAACGGCCGATGATCTGATGAGCGGGATTATGGGTGTCGACAACACCAAACTGAGACGTTTTGAAAGCAATGCGGTAGCGCTGATGGAACTGAAAGGCGGCGGAGCCGACGCGGTTGTGGCTGATATCGCTATTGTGAATGAATACATTAAGAACAATCCGAAAGAGAAAGTAACGGGCATCCTCGATAAGGAGAACTTTGGTTCCGAATATTACGGCATTCTATATCCTAAGGGTAGCGAGTGGAAAGCCAAACTGGATCCGGCAATCAAAGCTGTTATAGAGAACGGAAAGTATGCCGAGATCTACAAAACCTGGTTCGGGGAAGAACCGGATACAGCCACTCTTCTTAGCGCGGAGTAAGCAAGCAGGGAGACAATAAAGCGTGCGTAATGATTGCTATTGCGCATGCTTCTTTTTTTGAAATTTAGAGCAGAAGAGAAGGGAAGAATTCTATGGACTTCAGATTCGACATCATCGTTCATTATTTGCCGGTCTTACTGAAGGGAACGCTATTCACAATTGGAGTATCTATTGTATCTATTCTTTGCGGCTCGATCCTGGGCTTGGGGATGGGCTTTGGCAAAATGGCTCCGAAATGGTATTTCCGCTGGCCGTTCCATTCCTATATTAACTTCTTTCGTGGCACACCGCTGTATGTACAGATCCTGATCGTGCATTTTGGGGTAATTCCACTTTTTTACGGCACGACCAACGTCCTGATGACCTCATTTGTCGCACTTTCGCTGAATTCTGCCGCCTATTCCGCCGAGATTTTTCGTGCCGGTATCCAGTCGATCGATCCTGGGCAGCGGGAAGCCGCGTTGTCGCTTGGAATGAGCAAATGGCAGGCGATGCGTTTTATCATTCTGCCGCAGGCGATCAAACGGATGGTTCCGGCGTTCGGGAATGAATTTATTGTCCTGGTTAAGGATTCCTCCTTGCTTGCGCTTATTGCCGCCCCGGAGATTATGTATTGGAGCAATACGATGAAAGGCCAATACTTGCGGATATGGGAGCCTTATTTGACCGCTGCCTTTATCTATTTCATTCTTACCTATTCACTCAGCAAGCTGCTCAATTATATTGAACGGAAGGTGTAACCTTATATGGAGCCTATTATTTCGGTACGACATTTACATAAATCATTCGGTGCCCATCAGGTGCTGAGCGATATTAACGTGGATATCTACGGCCGGGAGGTTGTGGTGGTAATCGGGCCTTCGGGTTCGGGAAAATCGACCTTTTTACGCTGCCTTAATCTGCTGGAGGAGCCGCAAGAGGGCGATGTTATCATTGAAGGAACTTCCTTGATGGCCAAAAGCACAAGAATTAACGATATCCGTACAGAGGTCGGCATGGTGTTTCAGCAATTTAATCTGTTTCCGCACAAGAAGGTCATTGAGAACATTATGCTGGCCCCGATGCAGGTCCGTAAATGGCCTGCGGACAAAGCGCGGCAGAAGGCGCTGGAACTGCTGCAAAAGGTCGGCTTAAGCGAGAAGGCGGAGATGTATCCGGCATCCCTGTCGGGCGGGCAGGCCCAGCGGGTCGCAATTGCCAGGGCGCTGGCGATGGAACCGAAGATTATGCTCTTCGATGAGCCGACATCGGCGCTGGACCCGGAAATGGTCGGTGAGGTGCTGGCGGTAATGAAGGATTTGGCCCGCGAAGGTATGACTATGGTTGTAGTCACGCATGAGATGGGTTTTGCGCGCGAAGTAGGCGATCGTGTCTTGTTTATGGAACAGGGCGTGGTGGTTGAGGAAGGTATTCCGGAACAGTTGTTTGGCAATCCTTCACATGAACGAACTAAGGGATTTTTGTCGAAAGTACTGTGAAATTGTGGCAAACTAGAATATTGTTTTTCTATCGGTTATATTAGAATAGTAAACTTACGGATCGACAAATACTAAGAATATCTGTCGAATAGAAGGAGAGGAGGCTCTGGGATATCTTTATTTATCATACTCTATAATGATAGAAGGAGAATACGATGAGCACATTTAAAAATTGGTTGAATACAACAAAGAGCGGGTTAACGGAACAAGTTAAGAAATTTAAAAATAAAGATTTCATGAACGCGGTAGTTGCAGGCTGCGCGCTGGTTGCGGCGGCTGATGGCAAGATTGAAGAAACCGAAAAGAACAAAATGGCGGGGTATATGAATCTCAGCAATGAACTCAAAGTGTTTGACATGAGAGATGTCATTGCCCAGTTCAATTTCTACGTAAGCAATTTTGAGTTTTCCCCGGAGATCGGCAAACAGGAAGCACTCAAAGCTATTGCTAAATTCAGCAGCAAGCCGGAAGTTGGACGCGTAATTGTTGGTGTGTGTTCGGCTATCGGTGCAGCAGACGGTGATTTTGATGAGCATGAGAAAGCGGTTGTGCGGAATATCTGCAGTGTACTGGGATTAAGCCCAAGCGAATTCAGTCTCTAAAACAGGAACAAATATCCATTAACCGGATGAAACGGATTGGGTTTTTTACCGTATGAGTGGTATAACATCCAAAATGCTAGACTTACAGGCTGTGATTCTTTTCGGAAACGGAGGTACGTAAAGTTGGCTGGAATTAATTTGGTAAAAGGACAGAAGATTGATTTAACTAAAGGAAATGCCGGGCTGGCTAACGTTATTGTAGGTTTGGGCTGGGACCCTGCCGAACCTGCCCGCGGGTTCTTCGGTGCGAAGAAACAGGCGAATGTGGACTGCGACGCTTCGGCGCTGCTGCTGAGCGAGAATGGTAAGCTGACCAGCAAAATGAATTTGGTATGCTTTCACAACAAGCAGAATCCGAACAATTCCGTTGTTCATTCCGGGGATAACCTGACGGGTGATGGTGACGGGGACGATGAACAAATCAATGTCAATCTGAAGGCAATCCCTTCCGATGTGCACAAGGTACTTGTAGTAGTTAACATTTATGATGCCGTGAACCGCAAACAGGATTTCGGCATGATCAAATCGGCGTATATCCGCATTATCAATGCTGCCGGAAATGCCGAGCTGATCCGGTTTAATCTGACCGACAATTACACAGGCTTTACGGCGCTGATCTGTGGAGAGCTTTACCGGCACGGCGAAGAATGGAAATTTGCCGCAATCGGTGAAGGTGCCCATGCCGCACATATCAATCAATTGGCTGAACGATACATTTAAATCTAATTTCGGAAAGAAGGTTTAATAACTATGGCAATTAATTTATCCAAAGGGCAAAAGATCGATTTGACTAAAAGCAATCCGGGATTGTCCAAAATCAAAGTCGGCCTCGGTTGGGATACCAACAAATACGATGGCGGCAAGGATTTTGACCTCGACGTTTCCGTCTTTCTGACAAATGCTGCAGGTAAAGTTGGGAAAGAAAGCAACTTCATCTTCTTCAACAATAAGCAGAATGAGAATGCTTCCGTTGTTCATGCCGGCGATAACCGTACCGGTGAAGGTGATGGCGATGATGAAGTGATTGAAGTGGATCTGAAGAACATCCCTGCAGATGTTGAGAAGGTTGCTTTTACCATTACCATTTATGAAGCGGAGTCCAGAAGCCAGAACTTTGGACAAGTATCGCGTTCTTATGTGCGTATCGTCAACGAGGAGAACAATGAGGAGCTGATCCGCTTCGACCTTGGTGAAGATTTCTCCGTTGAAACGGGCGTGGTAGTTGGTGAACTGTACCGTCACGGCGCAGAGTGGAAATTTAATGCTATCGGCGCAGGCTACAAAGACGGTCTTGCCGGTCTGACACGCGATTACGGACTGCAATAAAATTTACTGCAGCCAACCTAGACATCTAGACCTTAGATGAAACCATTCACGAAAGAGGGTTGATGCCAGTGACGATCAGTCTTTCTAAAGGACAACGGATCGATCTTACCAAGACTAATCCGGGTCTGACGAAGGTAGTGGTGGGACTCGGCTGGGATACGAACAAATACAGTGGCGGCAAGGATTTTGACCTGGATGCTTCAGCGTTCCTGCTGCATGAAGACGGCAAAGCCAAAGGGGCGGACGACTTTGTATTCTACAATAATCCGACTGGCGGTGCAGGCTCCTTAACCTATACGGGGGATAACCGTACAGGAGAAGGCGACGGGGATGACGAGCAGATCATTGTTGATTTCAGCAAAGTTCCTGCACATATTCAGCGTATCGGGATCACGGTAACGATCTATGATTGTGATGCACGGGCACAGAACTTTGGACAGGTGTCCAATGCATTTGTTCGTGTCGTGGACGCTTCCAGCGATCGTGAAGTGCTGCGATATGATTTGGGTGAAGATTTCTCAACGGAGACTGCTGTTGTATTCTGTGAATTCTACCGGCATGGTGCCGATTGGAAATTCCAGGCGATTGGAAGCGGATTTGCCGGCGGCCTAAGTGCTCTATGCAGAAACTATGGACTGGACGCGCAATAACAGCTTCAAAGGCTTGAAAGGCGGGATCTCATCGATCCTGCCCTTTTTATACTCTTATCCATTTACAAAGGTGGCTTAAGAATGAATATTGAAGTGGTTAAAGGCCAGAAGGCAGACCTGACCAAAGCAAATCCCGGGCTTCGCTCTATTATCGTGGAGATTGGCTGGCAGGCTCCGTCCTCTATGGAAATTGATGCCTCTGCATTTTTGCTTGGAGAACAAGCCAAAGTGCGCAGCGATGAAGATCTGATCTTTTACAACAATCCATCTACGGCGTACATCAGATATAAGGATGTAGCCGGTACCAAATCAAGCGGTCTTAAACACTTTGAAATCGAGCTGGATACCATTCCTGCTCAGACGATGAGGATTGCATTTGCAATTACACTGTACGATGGCGAAAACCGCAATCAAATGTTCGGGCAGATGAGCGAGGCCCATTGCCGGATTCTGGATCGGGCGACGGGTATGGAGATTTTGCGCTGTAATCTTGAAAATCATTTCTCTGTGGAAACAGCTGTTGTAGTAGGAGAATTATATAGATATAGCGGTGAGTGGAAATTCAGTGCTATTGTGGCTGGATTTAACGGCGGACTTAAAGCCTTGTGCGCTAACTATGGAATTGAGGTCGAAGATGATCCGGTTCCTGAACTCCGTGAACCGCAGAAAGGTCCTGCACCGGAATTGGCACGGCCATCCGTACCGCCTGTGCAAGAATCCCGGAGTATCCCGCCGGCTGTACCGCCTGCACCACCGAAGATTGAAGAGGCTTCTGCGCCGCCTCTGAATCTCAACCTCAAGAAGATTGAGCTGAAGAAAAAGGGCGATTCCATAAATTTGAAGAAATCAGCTGCCGGTCTTGGAGAAGTGCTCATCAATCTGAATTGGAATCAGAAGCAAGGCGGTGGGTTGTTCAGCCGTAAAGGGGGCGTGGATTTGGATCTCGCTTGCCTGTACGAGTTGAAGAATGGCCGCAAAGGAGTCGTTCAAGCGCTGGGAAATGCTTTCGGAAATCTTCAGCAGCCGCCTTATGTGGTGCTCGATGGCGATGACCGGACAGGCACCGTAACATCCGGCGAGAACTTGCGTATAAACGGAAGTAAGCTTGCGGAAATAGAACGAATTTTAATCTTTTCATTTATTTACAAGGGGGTTACGCACTGGTCTGAAGCCGATGGAGTCGTCACCATCACTCAGGCTGGGGGTCCGGAGATTATTGTGAATCTGGACGAGCATAACAACCGGAAAGGCATGTGCGCTATTGCATTGATCCGGAACGTAGGCGATACATTCAGCATTGAACGGCTTGTGCAATATTTCAGCGGCCATCAGGAGATGGATCAGGCCTATGGCTGGGGACTGCGCTGGGTAGCGGGCAGTAAATAATTTAATTTTTCCGGAGGCGCAAGCAAAATGGATTGGTTCAGTGATTTTTTTAGAAGTATCAGCGAGAATTATGGGCACTTTTTCTCTTGGAGCGACATTGTAGGAACGCTCTCTGACCCGGTCAGCTGGGGGATTATCGGGAGCTTGATTTTGCTCGAAGGGCTGCTATCGGCAGATAATGCGCTTGTGCTTGCGGTAATGGTTAAGCATTTGCCGAAAGAACAGCAGAAGAAGGCGTTGTTTTACGGGATATTGGGAGCTTACCTCTTTAGATTCCTGGCGATCGGACTAGGGACATTCCTGATTAAATTTACGCTCGTCAAAGTCCTTGGGGCATTATATCTCTTTTATATCGCTTATAAAGGATTATTCAAGCGAAATGAATCCGGCGAAGGTGAAGAAGGGAAAGAACATAAAGGCACCTCTTTCTGGAAAACTGTACTGCTGGTTGAATTGATGGATATTGCGTTCAGTATTGACAGTGTGGTAGCTGCCTTCGGGTTGAGCGACAAAGTCTGGGTTCTTTTCTTGGGCGGTATCCTCGGCGTGCTGATGATGCGCGGTGTGGCGCAGGTGTTCCTGAAGCTCATTGCCAAGTTCCCTGAACTGGAGCAGACGGCGTTCCTGTTGATTGCCCTGATTGCAGGCAAAATGCTTGCTGGAGCGTTCGGATTTGAAATGCCGCATTTCATTTTCTTCACCATTCTGATTGCGGTCTTTGTGGGAACCATTCTGTACAGTTCCGGAAAGAAAAAGAAAGAAATGAACAGAAACGCGTAA

Protein sequences of DBSCAN-SWA_1

>NZ_CP009241|369227:378449|375701_376283_+|WP_038585047.1|DBSCAN-SWA
MTISLSKGQRIDLTKTNPGLTKVVVGLGWDTNKYSGGKDFDLDASAFLLHEDGKAKGADDFVFYNNPTGGAGSLTYTGDNRTGEGDGDDEQIIVDFSKVPAHIQRIGITVTIYDCDARAQNFGQVSNAFVRVVDASSDREVLRYDLGEDFSTETAVVFCEFYRHGADWKFQAIGSGFAGGLSALCRNYGLDAQ
>NZ_CP009241|369227:378449|370281_371157_+|WP_038585030.1|DBSCAN-SWA
MRKVKVAATQMSCSGDIDENIRKADSLVREAAAQGAQIILLQELFETPYFCQKEKSDYYVYATELEQNKAVNHFKAVAKELQVVLPISFYEKKNYARYNSLAVIDADGTVLGKYRKSHIPDGPGYEEKFYFNPGDTGFKVWNTRYAKIGVGVCWDQWYPEAARVMSLMGAEILFYPTAIGSEPQDGSIDSKDHWQTCMLGHAAANLIPVVASNRIGEEIDEDSSINFYGSSFIAGPQGNKIVEAGRDEQTVLVSEFDLDALEVGRIEWGIFRDRRPELYRMISSYDGDLTF
>NZ_CP009241|369227:378449|372982_373705_+|WP_038598375.1|DBSCAN-SWA
MISVRHLHKSFGAHQVLSDINVDIYGREVVVVIGPSGSGKSTFLRCLNLLEEPQEGDVIIEGTSLMAKSTRINDIRTEVGMVFQQFNLFPHKKVIENIMLAPMQVRKWPADKARQKALELLQKVGLSEKAEMYPASLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLAVMKDLAREGMTMVVVTHEMGFAREVGDRVLFMEQGVVVEEGIPEQLFGNPSHERTKGFLSKVL
>NZ_CP009241|369227:378449|377696_378449_+|WP_038585053.1|DBSCAN-SWA
MDWFSDFFRSISENYGHFFSWSDIVGTLSDPVSWGIIGSLILLEGLLSADNALVLAVMVKHLPKEQQKKALFYGILGAYLFRFLAIGLGTFLIKFTLVKVLGALYLFYIAYKGLFKRNESGEGEEGKEHKGTSFWKTVLLVELMDIAFSIDSVVAAFGLSDKVWVLFLGGILGVLMMRGVAQVFLKLIAKFPELEQTAFLLIALIAGKMLAGAFGFEMPHFIFFTILIAVFVGTILYSSGKKKKEMNRNA
>NZ_CP009241|369227:378449|369227_370256_+|WP_038585028.1|DBSCAN-SWA
MYPKDLNYTMPAEWGKHERTFISWPVQASMVFPDNHKSVCDGYAEIIRAIAEFEPVTVVVNPDDLGMVEELELGANVTLLPIRHNDAWLRDNGPTFVLGEDGVLAGVNWKFNAWGGKYSPWDLDDEVAPQILEQLKMKRFDAPLVMEGGSIHTDGEGTLITTEECLLNTNRNPELDRADIEEYVRKYTGTESIIWLKRGLSGDETDGHVDNIACFAAPGKVIIQVCGDPQDENFGITQENLRILENAVDAKGRKLEIIQIQQPPRVDYEDSRLTLSYLNFYFVNGGIILPVFGGTASETDQLAEQSLAALFPDRRIRKVNGMAVIGEGGNVHCTTQQMPATK
>NZ_CP009241|369227:378449|371411_372227_+|WP_038585032.1|DBSCAN-SWA
MGIRKKWAMSALVAFLVLSMVGCGSNNNAKSGDAAEESIKFASDASYAPMEYMDTDTIKGFDIDFIKAVMEEAGIDYTVTNTGWDTMLSSVKQGTEYQAGLSSVSITDERKETYDYSIPYFESTNMIMVKEGSDIKNALDLKDKTVAVQGATTADDLMSGIMGVDNTKLRRFESNAVALMELKGGGADAVVADIAIVNEYIKNNPKEKVTGILDKENFGSEYYGILYPKGSEWKAKLDPAIKAVIENGKYAEIYKTWFGEEPDTATLLSAE
>NZ_CP009241|369227:378449|373860_374307_+|WP_038585038.1|DBSCAN-SWA
MSTFKNWLNTTKSGLTEQVKKFKNKDFMNAVVAGCALVAAADGKIEETEKNKMAGYMNLSNELKVFDMRDVIAQFNFYVSNFEFSPEIGKQEALKAIAKFSSKPEVGRVIVGVCSAIGAADGDFDEHEKAVVRNICSVLGLSPSEFSL
>NZ_CP009241|369227:378449|372319_372967_+|WP_038585035.1|DBSCAN-SWA
MDFRFDIIVHYLPVLLKGTLFTIGVSIVSILCGSILGLGMGFGKMAPKWYFRWPFHSYINFFRGTPLYVQILIVHFGVIPLFYGTTNVLMTSFVALSLNSAAYSAEIFRAGIQSIDPGQREAALSLGMSKWQAMRFIILPQAIKRMVPAFGNEFIVLVKDSSLLALIAAPEIMYWSNTMKGQYLRIWEPYLTAAFIYFILTYSLSKLLNYIERKV
>NZ_CP009241|369227:378449|374430_375027_+|WP_038585041.1|DBSCAN-SWA
MAGINLVKGQKIDLTKGNAGLANVIVGLGWDPAEPARGFFGAKKQANVDCDASALLLSENGKLTSKMNLVCFHNKQNPNNSVVHSGDNLTGDGDGDDEQINVNLKAIPSDVHKVLVVVNIYDAVNRKQDFGMIKSAYIRIINAAGNAELIRFNLTDNYTGFTALICGELYRHGEEWKFAAIGEGAHAAHINQLAERYI
>NZ_CP009241|369227:378449|375057_375633_+|WP_038585044.1|DBSCAN-SWA
MAINLSKGQKIDLTKSNPGLSKIKVGLGWDTNKYDGGKDFDLDVSVFLTNAAGKVGKESNFIFFNNKQNENASVVHAGDNRTGEGDGDDEVIEVDLKNIPADVEKVAFTITIYEAESRSQNFGQVSRSYVRIVNEENNEELIRFDLGEDFSVETGVVVGELYRHGAEWKFNAIGAGYKDGLAGLTRDYGLQ
>NZ_CP009241|369227:378449|376364_377669_+|WP_038585050.1|DBSCAN-SWA
MNIEVVKGQKADLTKANPGLRSIIVEIGWQAPSSMEIDASAFLLGEQAKVRSDEDLIFYNNPSTAYIRYKDVAGTKSSGLKHFEIELDTIPAQTMRIAFAITLYDGENRNQMFGQMSEAHCRILDRATGMEILRCNLENHFSVETAVVVGELYRYSGEWKFSAIVAGFNGGLKALCANYGIEVEDDPVPELREPQKGPAPELARPSVPPVQESRSIPPAVPPAPPKIEEASAPPLNLNLKKIELKKKGDSINLKKSAAGLGEVLINLNWNQKQGGGLFSRKGGVDLDLACLYELKNGRKGVVQALGNAFGNLQQPPYVVLDGDDRTGTVTSGENLRINGSKLAEIERILIFSFIYKGVTHWSEADGVVTITQAGGPEIIVNLDEHNNRKGMCAIALIRNVGDTFSIERLVQYFSGHQEMDQAYGWGLRWVAGSK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038585028.1|369227_370256_+	agmatine deiminase family protein	A7RCL2	Paramecium_bursaria_Chlorella_virus	2.1e-64	36.9
WP_038585030.1|370281_371157_+	N-carbamoylputrescine amidase	M1GUG4	Paramecium_bursaria_Chlorella_virus	5.7e-74	48.1
WP_038585032.1|371411_372227_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_038585035.1|372319_372967_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_038598375.1|372982_373705_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	7.6e-24	32.2
WP_038585038.1|373860_374307_+	tellurite resistance TerB family protein	A0A1Y0T181	Sinorhizobium_phage	6.8e-07	29.3
WP_038585041.1|374430_375027_+	TerD family protein	K4JRX3	Caulobacter_phage	1.1e-20	31.6
WP_038585044.1|375057_375633_+	TerD family protein	A0A2L1IWC0	Streptomyces_phage	2.8e-05	30.6
WP_038585047.1|375701_376283_+	TerD family protein	K4JRX3	Caulobacter_phage	2.6e-27	37.7
WP_038585050.1|376364_377669_+	tellurium resistance protein TerA	NA	NA	NA	NA
WP_038585053.1|377696_378449_+	TerC family protein	A0A068EP98	Bacillus_phage	7.0e-57	50.6

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP009241|710401:722277|DBSCAN-SWA
TATGATCGAACGATACAGCAGACCTGAGATGCGGGCCATTTGGACCGAAGAAAATAAATTCAATGCATGGCTCGAAGTGGAAATATGTGCGTGCGAAGCCTGGGCGGAGCTGGGAGTTATTCCGCAGGAAGACGCCGCTAAGCTGCGCAAGGACGCCAAGTTTGATATTGAACGCATCAACGAGATTGAACTTGAAACCCGTCATGACGTGATCGCCTTTACCCGTGCCGTATCCGAAAGCCTTGGCGCGGAGCGCAAATGGGTGCATTACGGATTAACCTCCACGGATGTTGTTGATACGGCGCTGGGTTACCTGCTGCGCCAGGCGAACGAAATTCTGGAGCAGGACATCATTAACTTCATCGAAATTCTTAAGGATAAAGCGGTAGCTTACAAGGATACGCCGATGATGGGACGCACACATGGCGTTCACGCTGAGCCGACGACCTTTGGACTCAAGATGGCACTGTGGTATGAGGAAATGAAACGCAACCTGGAGCGCTTCCGCCATGCTGCGAACGGCGTGCAGTTCGGTAAAATCTCCGGCGCGGTCGGCACTTATGCCAACATCGACCCGTTCGTGGAAGAGTTCGTCTGCCGCAAGCTGGGTACCAGCCCGGCACCGATCTCCACGCAGACCCTGCAGCGTGACCGCCATGCCGAATATATGGCTGCGCTGGCGCTGGTCGCCACTTCGCTGGACAAGTTCGCCACCGAGATCCGCGCGCTGCAAAAGAGTGAAATCCGCGAGGTGGAAGAGGCTTTTGCCAAAGGTCAAAAAGGCTCCTCCGCCATGCCGCATAAACGCAATCCGATTGGCTGCGAGAATATTTCCGGCCTGTCGCGCGTCATTCGCGGCCATATGGTTACTGCTTATGAGAATGTACCGCTGTGGCATGAACGCGACATCTCGCACTCTTCGGTGGAACGGATTATCCTGCCGGATGCGACCATGCTGCTCAACTATATGCTGAACCGTTTCGGCAACATCGTGAAGAACCTGACCGTGTTCCCGGAAAATATGAAGCGCAACATGAACCGGACCTTCGGCGTGCCGTTCTCCGGCCGTATCCTGACCAAGCTGATCGACAAGGGCTTCAGCCGCGAGCAGGCTTACGATACCGTTCAGCCGCGTGCGATGCAGGCTTGGGAAGAGCAAACCCAGTTCCGCGACATCGTCGAAGCCACACCTGAAATCACCGCTGTCCTTAGCCCGGAAGAGATCGAAGATGCATTCAATCCTACATGGCACCTTAAGCATGTCGACACTATCTTCCGTAAGCTGGAGCTTATCTAATAAAAGGTAAGTTATTGGTGAACGGAGGAGCTGGAGAATAATACGAGCGGGAGCACTAGGCAGTTTTTCTATACTGAGAAGCGGAGCTACAGGGAGAATGAAATAAGCACTTGGGGTAAAGAGGAACGGAGAGAAATTTTGGAACTGTAGAAGCGTCAGCGTTCGCCTGAAAGCTTTCCGTAGGAAAGCTCGCTTCGGAAGCATGAGCTATGGTCAGATTTCTACCGCAGCTTGCGGTTAAATCAGAGAAATATGACCATAACAGCGATCGGAAGTCCAAATATTTCTTGCAGTGAACCTATTAACCAGAGGAAGTATTACAAATTTCTGTTGGTCCAGATCGAAGGAAATAAAACGTCCCAGTGCTTTTTGCTCAAGATATTAGCAAGATCATTTGGTCAAGGGAGGAAAGGTCATGACACACCCTGCCGTATCCACGGCTGTGGATCTCGTAAATGCACCGCTGCTCTATAAAGGAAAGGTTCGCGAATTGTATGACTTGGGGGAACAGACTCTGATTGTCGTTACGGACCGGATCTCCGCGTTCGACTATGTGCTTGATCCGGCGGTGCCGGAGAAAGGCAATGTGCTGAACCGGCTCAGCGCTTTCTGGTTTGGCAAGACGAAGGACCTGATGGAGAACCATGTCGTGCATATTGATGTGGACCAGCTGGGAGATATCGCACGCGACAGAGAGGCGCTCAAGAACCGGATCATGGTTGTCCGCAAAGCAGAGCGCATTGATATCGAATGTGTCGTGCGCGGCTGCATCACCGGCGGGGGCTGGCGGCAGTACCAGGAGACCGGGAAAGTTAACGGTATTGAACTACCCCAAGGCCTGCGTAAAAATGCCGTACTGGCCCAGCCGATTTTCACCCCTGCGGCCAAAAATGATGTAGGCCATGATGAGGATATCCCTTTTGAGCAGATGCAGGAGCTGATCGGTGCCGACCTGGCGCTTGAGCTGAAGGAGAAAAGCCTGAAGCTGTTCGCTTTTGCCAAAGAATACTGTGAAGAGCGAGGTATCATCCTAGCGGATTGCAAGTTTGAGTTCGGTTTGCTGGACGGCAAGGTGATTCTGATCGACGAGATTTTCACCCCGGATGCTTCCCGCTTCTGGGCCAAAGATAAATACAGTCTGGATATTGAAATCGACAGCATGGACAAGGAGCCTGTCCGGACGTATCTTGCCGCATCCTCCTGGGACAAGAACAGCACGCCGGACCCGCTGCCGCTTGAAGTCGTGGAAGAGACGAGCCGCCGTTATCTGGACATCTATCATCGCCTTACCGGCAAGTCTTTATAGTTTATTAACTTGGCCAGCTGTAGTGTGTCCGCTAGTTGCATTCTCTGCAGTTATTTTGAGCAAAATCGCCGCTGGCTGCCTTTTAAATGTATCTGGTACAACTAAATCAGGCGAACAAGCCTGGAACGGCGGTTGTTTCAAAATATAGCTGTATGGAATGCAATTAAAGTGGGTTTTGCCCGAAATAAAAGGAATTTAGCTGTACAGAATGCAGTTATCTCAATATTAAACTCAGGTACATCCGTGTTCTTGTTGATTGCCCATTGAGGCCCATAAAATTTTAGGAGGAACTACAAGCGTATGTTAAAAGCGACAGTCTATGTCACCATCAAGAAAAGCGTGCTCGATCCCCAAGGTGTAGCGGTGCAAGGAGCGTTGCATTCGGTAGGGTTCCAGGAAGTTGAAAGTCTGCGCATCGGCAAATATATGGAGCTTACCCTCGACACAGATAACCGCGCCGAAGCGGAAGGACGCCTCAAGGAAATGTGCGAAAAGCTGCTGGCCAACACGGTGATCGAGGATTACCGCTACGAATTGGAGGACTAAAAGTCATGAAATTTGCTGTACTCGTCTTTCCAGGCTCCAATTGCGACATTGACTGTTATAAGGCGGTAGAAGACAGCCTTGGCGAACCCGTGGATTATGTGTGGCATACTGCGACAGACCTGTCGGCGTATGACTGCATTCTGGTACCAGGCGGCTTCTCTTATGGTGACTATCTGCGCTGCGGCGCGATTTCCCGGTTTGCTCCGGTGATGGCTGAAGTGGCCAAAGCTGCGGAGCAGGGCAAATTCGTGCTTGGCATCTGCAACGGGTTCCAGATTCTGACCGAAGCGGGACTTCTGCCGGGTGCGCTGCGCCGCAACATGTCGATGAAATTCCGCTGTCATGATACCGTGCTTAAGGTCGTTAATAACACAACCCCGTTTACTGTTGATTATGCGAAGGATGAAGAGATTGTCATTCCGATCGCGCATGGCGAAGGTAATTATTACTGTGATGAAGAGACTTTGGCGTCGCTCAAAGCAAACAATCAGATCGTATTCACATATAGCGACAATCCGAACGGCTCGGTAGCCGATATTGCAGGCGTCAGCAACGCAGCGGGCAATGTGGTTGGCATGATGCCTCACCCGGAACGTGCAGCGAACAGCCTGCTGGGCTCGGAAGACGGCAAACGGATGTTTACATCTATACTCAAAACCTGGAGGGATCGTTATGACGCAGCAAGTATCCGTTAAGGAGCCGACCGCAGAGCAAATCGCGGAGCAGAAAATCTACAGTCAATTCGGCGTGTCGGACAGCGAATATGAACTGATCACGTCCTTCATGGGCCGCAAGCCCAACTATACAGAAATCGGCGTATTCAGTGTAATGTGGTCCGAGCACTGTGCCTACAAAAATTCCAAGCCGCTTCTTAGCCGTTTCCCGACCAGCGGACCGCGTGTCCTGATGGGACCGGGCGAAGGCGCCGGCATTGTCGATATCGGTGACAACCAGGCGGTTGTATTCAAAATCGAAAGCCACAACCATCCGTCGGCGGTAGAACCCTATCAAGGTGCGGCTACAGGCGTGGGCGGGATTATCCGCGATATTTTCTCCATGGGTGCTAGACCGGTAGCGCTGCTTAACTCTCTGCGTTTCGGGAAGCTCGAGAGCGACCGGGTAAAATATTTGTTCGAGCATGTCGTGTCCGGTATCGCAGGTTACGGCAACTGTATCGGCATTCCGACCGTAGGCGGCGAAATCATGTTCGACAACAGCTATGACGGCAATCCGCTGGTCAATGCGATGTGTGTCGGACTGATCGACCATGATAAAATCCAGCGCGGTGTCGCCAAAGGTGTAGGCAATCCCGTATTCTACGTGGGTCCACCTACAGGGCGTGATGGTATTCACGGGGCGACGTTTGCCTCCGTGGAGCTGAGCGAGGAGTCGGAAGCCAAGAAGACAGCAGTGCAGGTTGGGGATCCGTTTATGGAGAAGCTGGTGATGGAATCCTGCCTGGAGCTGATCGACAGCGGCATCGTGCTTGGCATTCAGGATATGGGCGCGGCAGGCCTGACCTGCTCCAGCGCAGAAATGGCCAGCAAAGCGGGCAATGGCCTGGAGCTGTATCTGGATCAGGTACCGCAGCGTGAAGAAGGCATGACCCCTTACGAGATGATGCTGTCGGAATCACAGGAACGGATGCTGTTTGTGGTGGAGCCTAAGGATGAGGCGCAGGCACAGGAGATTTTTGACCGCTGGGGCGTCATTTGCCGCAAAGTGGGCAAGGTAACCGATGACGGCCGCCTGAAGCTGTTCCATCACGGTGAGGTTGTCGGCGATATGCCGGTAACGGCTCTTGTAGATGAGTGTCCAATCTACAACAAACCGTCCGCAGTTCCTGCTTATTATGAAGAGAATGCATCGGTCGATACTCTGCGTTATGCCGAGGTTACCGATCTGGGCGGCGCGCTGCGCACGGTACTCGCTTCCCCTACGGTAGCAAGCAAAGCATGGGTATACAACCAATATGACTATATGGTTCGCACCAGCACAGCGGTTCGTCCCGGTTCCGATGCTGCAGTGGTTACGATCCACGGCACACGCAAAGGCCTGGCAATGACTACGGACTGCAATGGCCGTTATGTTTATCTTGACCCTGAAGTCGGTGGCCGGATTGCAGTCAGCGAAGCGGCGCGCAACATTGTCTGCTCCGGAGCTAAACCGCTGGCGATTACAGATAACCTGAACTTTGGCAGTCCCGAGAAGCCGGAGATTTTCTGGCAGATGGAACGTGCGGTAGACGGCATGGCTGAAGCCTGCCGTGTGCTCGATACGCCGGTTATCGGCGGAAATGTCAGCCTGTACAACGAAAATGCCTCCGGAGCGATCTATCCGACACCGGTTGTCGGTATGGTGGGTCTCGTGGAAGATACCGATCACATTACCACTCAAGCCTTCAAGCAAGAGGGCGACGCCATTCTACTGCTTGGGGTGACTAAGGCTGAGCTTGGCGGCAGTGAGTTCCAATATGCTGTACATGGCCTGACGGAAGGCCGTCCGCCGGCACTGGATTTGGCTACTGAACAAAAGCTGCTGGATGCTGTGCTTGGCACGATCCGCGGCGGTCTGGTCCGCTCCGCGCATGACCTTTCCGAAGGCGGCCTTGCGGCTGCACTGGCAGAGAGCTGCATCAGCGGCGGTATTGGTGCTAACGTAGAGCTGTCCGCGAACGGGCTGCGGCCCGATGTGGCCTTGTTCAGCGAGAGCCAATCCCGTATCGTACTGACCGCTGCTCCTGATCGTGCGGAAGAGCTGAAAGCAGCAGTTGCCGCTTACGGCGTGCCGGTGGAAATCATCGGAACCGTTGGCGGGGACAGACTGCGCCTGGCTCTAGACGGCAAGACTGCACTGGATGAAGCTGTAACGGAATTAAAAACCATTTGGGAGGATGCTATTCCATGTCTTATGAAATAAAGACCGGGAAAGAGCAGGCGGCTCCAATCCTGTGGACCGGCGATTTTTACAACGAAGGAACGGGCTCGGGAGATATTTTTGACACTTTAAAAGAAGAATGCGGCGTATTCGGGGTCTTCGGACACCCGGAAGCCGCCTCCATGTCTTATTATGGACTGCATGCGCTGCAGCACCGGGGAGAGGAAAGCGCGGGCATCTGCGTGGCAAACGGACGCGACTTCAACTATCACCGCGGCATGGGCCTCGTCAAGGAAGTATTCGATAAGGATAAAATTGCTTCACTGGTTGGTGACATGTCCATCGGCCATGTGCGTTATTCCACCAGCGGCGACAGCCGGCTGACCAATGCGCAGCCGCTTGTCTTCAAATACCGTGACGGCGATCTGGCCATTGCCACCAACGGCAATATTGTCAACGAACCGCTGATCCGCAAGCAGCTGGAGCAAGGCGGCTCTATTTTCCAGACTACAAGCGACACCGAGGTACTGGCACATCTGATCGCACGTTCGCAGAAGGATTTTGTCGAAGCCACGAAAGATGCCCTGCAGCAGCTGGTCGGCGGTTTCGCCTTCCTGCTGATGACCAACGATAAGCTGATCGTCGCATCTGATCCGCACGGACTTCGTCCGCTCGTCATGGGCCAGCTCGGTGAAGCCTATGTCTTCGCTTCAGAGTCCTGTGCGCTTGAAGTTATCGGTGCCAAGCTGGTGCGTGATATTGAGCCGGGTGAATTGCTCGTGCTTGATAAGGACGGCTTCCGGGAAGACCGCTTCGCTGAGCCGAAGCGCAAGGCGCTTTGTGCCATGGAATATATCTATTTTGCCCGGCCGGACAGCGATCTGAACGGCTCGAACCTGCACTCCGCCCGCAAGCGGATGGGCAGCCGGATGGCGCTTGAAGCTTTTGTGGATGCGGACATTGTAACCGGCGTACCGGATTCCAGTATCTCCGCAGCCATCGGCTTTGCCGAGCAAACAGGTATCCCTTATGAGCTGGGACTGATCAAGAACAAATACACTGGCCGGACGTTCATCCAGCCGAGCCAGGAGCTTCGTGAGCAAGGTGTGAAGATGAAGCTGAGCGCCGTGCGCCGCGTCGTTGAAGGCCAGCGCGTCGTCATGATCGACGATTCCATCGTGCGCGGCACCACCTCGCGCCGGATCGTGAACCTGCTGCGTGAGGCCGGAGCGCTTGAAGTGCATGTGCGGATTACCTCGCCGCCATTCAAGAACCCATGCTTCTACGGCATTGATACACCTGATCGGCGTGAACTCATCGCCTCCTACAAGAGTATTCAGGAAATGTGCGAGGAGATCAACGCCGATTCCCTGGCCTTCCTTTCACCGGAAGGGCTGATCCAATCCATCGGCGGTTATAATAGCGATGATTACAAAGGCGGTTTATGCCTTTCCTGCTTCGACAACGATTACCCGACGCAGGTGGATTTCGGCGGGGAAGAAAAAGACGGCTGTTCCTGTTAAGCGGGTCCATCCCCCTATAGTCGAGTGGCCCATCCCCCTAAGTCCCCCTTGCGAAGGGGGATTCCGAAGGGCTCTGCCCTCCGGCCACCCGAAAGTTTGGCGGTAGGAGTTTGCTTTTAACTTGCTAAGAAGGCTGGGGTGCGGGTGCCCGCTTTGTCCCTGTGTGCTGCGCACGGCCGGGACACGCTCTACGGCGCTCCGCGCCCTGGCGGCATGCTGCCTCGCCGGGCCAAAGGCTCAAGAACCCATCCTGTTTGCTACGCAAAATCGGAGGTTCTCTCGCTTAAGGCGCGCCCGGCTTCGCCTCGCGCGCCAAAGACAAAGCTCTTAAAGCTCTCCCTTGTTTGCTGCGCAAATGCAGGGAACGCTTTTCTCGCTGAGGAGGCGCTTGTCTTTGCCAAGCGCCGAGGTCTTGCTGCTGCTGTGCAAGGCGCGTACAGCGGCTTGCGGCTGGGTTTGCCCCGGGTGGTTCGGAAGGCATGGAGAGGAATTTTGGAACTGTAGGAGCGATAGCGTTCGCCTTTATATTTGGATTTCTACCGCGAAGAGCGGTTTAAATCAGGAAATCCAAATATAACAGCGACCGGAAGTCCAAACATTCATCGCAATGGCGTCCAAGAACCACACACAGCCAATCCCTGCCGCCCCGAAACGCGCTCTAAACTAACTAATAATGAGGTGTCCAAAAGTGTCGGAAGCTTATAAAAACGCCGGAGTGGATATTGCGGCTGGCAATGAAGCCGTTGAACGCATGAAGAAGCATGTAAAGCGCACGTACCGTCCGGAGGTTATGACGGAGCTGGGAGGATTCGGCGCGCTGTTTGGTCTCAATAAGGACAAGTATGAAGAACCGGTGCTCGTATCGGGAACCGACGGCGTGGGCACAAAGCTCAAAATCGCTTTCGCGGCCGACCGCCACGACACGATTGGCATCGATGCCGTAGCCATGTGTGTGAATGATATTGTAGTACAAGGCGCAGAGCCGCTGTTCTTCCTCGATTATCTAGCCTGCGACAAGGTTGTGCCGGAGAAGATCGAGGCTATTGTTGCCGGCATCGCGGAAGGCTGCCACCAGGCAGGCTGCGCGCTCATCGGCGGCGAAACGGCTGAGATGCCGGGGATGTACTCGGCGGGCGAATATGATATCGCCGGCTTCACAGTTGGCGTAGCCGACAAAGCGAAGCTGGTTACGGGCGCGAACATCGCACCGGGAGATACGGTGATCGGTCTCGCGTCCAGCGGTGTGCACAGCAACGGCTTCTCGCTGGTACGCAAGCTTCTGCTTGAGGAAGACGGCTATGCGCTGAACGATGTGGTCCCTGAGCTTGGAGCTCCATTGGTGGATGTGCTGCTGGCTCCGACGAAGATTTATGTGAAGCCGCTGCTCGCGCTGCTGGAACAGCTGCCGGTTAAAGGCATGGCGCATATTACCGGAGGCGGGTTCATCGAGAACATTCCGCGCGTACTGCCGGATCATGTGAATGTGGAGATTAATTATGGCTCCTGGCCGATTCTGCCGATTTTCGGCTTGCTGCAGAGCAAAGGCAATGTAAGCAACCGCGATATGTTCACTACCTTCAACATGGGCGTGGGCCTGGTGCTGGTAGTGTCTGCAGAAGACGGAGAAAAAGCGCTGGAACTGCTGAAAGCAGGCGGGGAAGAGGCTTATCTGATCGGCACAGTAACGGAAGGGGAACGCAAGGTTACCTTTACGGGAGCTGAAGTGTGATGCAGTACAGCCGGATCGCTGTGTTTGCCTCCGGGCAGGGCAGCAATTTTGCTGCGCTGGTTCAGGCTCAGAACGCAGGGAAGCTTGGCAGAGGCCGCATTGAGCTGCTGGTATCTGACAGGCCGGAAGCGCTAGTGGCACAGCGTGCGGAGGAAGCGGGGATTCCTGCCCTCCTGCTGCGGCCGAAGGACTTCGCAAGCCGGGAGCTGTATGAAGCGGAGATTGTAGCTGAGCTCCAGCGCCGGGATATCGGGCTTGTCGTACTGGCGGGATATATGCGGCTGATTACTCCGGTGCTGCTTACGCCTTACGCCGGGCGCATCATCAACATTCATCCTTCTCTGCTGCCAGCCTTTGCCGGCAAGGATGCCATCGGCCAGGCATTAGACTACGGTGTGAAGCTGACGGGGGTTACGGTGCATTTTGTCGATGGGGGTATGGATACCGGACCGGTTATTGCCCAGCGCGGCGTTGCCGTAGAGGCCGAAGATACAGCGGAAACCCTTGCCGGACGAATTCATCAGGTAGAGTATGAGCTTTACCCTGAGGTAGTATCTGCTTTTGCCGCCGGGAAAATTGGACTGGACGGAAGAAAAGCCACAATTTCCGAATAGAAGTATAAGCGTTGCTGCTAAGGACAGGGAGCTTGCCATAAATGGAGTCATTCTGTGTCGCATACTATGGACATGAGCTGCGATTCCGCAGGAATTTTTAAAACAGCATTGTTTAGCACGTCTATAGCGTTAAATACTGGCGAATTGCGCGGTGCGCTGATCTTTTTATTGACAAAGGTTAATTTCTGCGGTCACTTCCGATATTTCTCGGGAAATATTGCACAAGCGGGCAAAGGGTGTCGGAGAGTGATGGAATGCCTGATTTATGCCTTAGGAAGAATGCTGTAAGCTGATGGAATTTTAGTGATTTGGCAAGACTGGTTTATTCGGGTGAAAGAGCTTGTAGATCAGTTATACAAGTTTAGGGCATCACATTGTTAAGCATTAACCATTCAAACACAACTAATCGGGCATCATCCGGAGGAGGACTATTCAAAGTGAGTATCAAAAGAGCGCTGGTCAGCGTATCGGATAAACAGGGCATCGTGGATTTTTGCCGCGAGTTGTCTACATTGGGCGTAGAAATCATCTCCACAGGCGGCACTAGCACACTTTTGGCTAAAGAAGGTGTACCAGTCATCGGTATTTCCGATGTCACAGGGTTCCCGGAAATTATGGACGGACGCGTCAAAACGCTGCATCCCGCCGTACACAGCGGACTGCTGGCAGTTCGTGACAACGAGGAGCACACGCGTCAGATGACCGAGCTTGGGCTGGACTACATCGATCTGGTCGTGGTGAACCTGTATCCGTTCGCGGAGACGATCGCCAAGCCGGATGTATCGTACGAGGAAGCTATCGAGAACATCGATATCGGCGGACCGACGATGCTGCGTTCGGCGGCGAAAAACCATGCTTTTGTCAGTGTGGTGGTGGATGCGGCCGATTATGCAGGTGTGCTTGATGAGGTACGTGCAGGCGGAGATACGACCCTTGAGACCCGCAAACGTCTTGCGGCAAAAGTGTTCCGCCATACGGCGGCTTACGATGCCCTGATTGCCGATTATTTGGCTAATGTGACCGGTGAACCGCTGCCGGAGCGCTATACGGTGACTTACGAGAAGATTCAGGATCTGCGTTACGGAGAGAACCCGCATCAGAAGGCGGCGTTCTACCGCAAGCCGCTCGCTGCGCAGGATACGCTGACGGCTGCCGAGCAGCTGCACGGCAAAGAGCTGTCTTACAACAACATTAACGATGCCAATGCGGCGCTGCAAATCGTCAAAGAATTCGAAGAGCCGGCGGTTGTGGCCGTTAAGCATATGAATCCATGCGGCGTGGGCGTGGGCGCAAGTGTATACGAGGCTTACCAAAAAGCCTACAATGCTGATCCAACCTCTATTTTCGGCGGGATTGTGGCTGCGAACCGTATTATTGATGCGGATACCGCTAACCTGCTGAAGGATATTTTCCTGGAAATCGTACTGGCACCGGGCTTCACAGATGAAGCGCTGGAGATCCTTACGAAGAAGAAGAACATCCGCCTGCTCAAAATCGGCAGCTTAAGCACGGCCTCTGCACGCAAGAGCAGCTTTGTCGTTACCTCCATTGAGGGCGGTATGGTAGTGCAGGAGAGCGATGTGCACTCCGTGAACCCGGAAGAGCTTCAAGTGGTCACAAGCCGCAAGCCAACCGAAGAAGAGCTCAAGCAGCTGCTGTTCGGCTGGAAAGTAGTTAAGCATGTGAAGTCCAATGCGATTGTACTGGCGGCGGATGATATGACCGTTGGTGTAGGCGCCGGACAAATGAACCGTGTCGGAGCGGCCAAAATTGCCATTGAACAGGCCGGAGAGAAGTCCAAAGGCGCTGTACTGGCTTCCGATGCCTTTTTCCCGATGGGCGACACGCTGGAAATGGCTGCGAAGGCTGGAATTACCGCAGTTATTCAACCGGGCGGCTCGATCAAGGATGAGGAATCCATCAAGGTTGCAAATGAATATGGAATTGCCATGGTCTTCACCGGCGTCCGCCATTTCAAACACTAG

Protein sequences of DBSCAN-SWA_2

>NZ_CP009241|710401:722277|710401_711697_+|WP_038585664.1|DBSCAN-SWA
MIERYSRPEMRAIWTEENKFNAWLEVEICACEAWAELGVIPQEDAAKLRKDAKFDIERINEIELETRHDVIAFTRAVSESLGAERKWVHYGLTSTDVVDTALGYLLRQANEILEQDIINFIEILKDKAVAYKDTPMMGRTHGVHAEPTTFGLKMALWYEEMKRNLERFRHAANGVQFGKISGAVGTYANIDPFVEEFVCRKLGTSPAPISTQTLQRDRHAEYMAALALVATSLDKFATEIRALQKSEIREVEEAFAKGQKGSSAMPHKRNPIGCENISGLSRVIRGHMVTAYENVPLWHERDISHSSVERIILPDATMLLNYMLNRFGNIVKNLTVFPENMKRNMNRTFGVPFSGRILTKLIDKGFSREQAYDTVQPRAMQAWEEQTQFRDIVEATPEITAVLSPEEIEDAFNPTWHLKHVDTIFRKLELI
>NZ_CP009241|710401:722277|714221_716468_+|WP_038585673.1|DBSCAN-SWA
MTQQVSVKEPTAEQIAEQKIYSQFGVSDSEYELITSFMGRKPNYTEIGVFSVMWSEHCAYKNSKPLLSRFPTSGPRVLMGPGEGAGIVDIGDNQAVVFKIESHNHPSAVEPYQGAATGVGGIIRDIFSMGARPVALLNSLRFGKLESDRVKYLFEHVVSGIAGYGNCIGIPTVGGEIMFDNSYDGNPLVNAMCVGLIDHDKIQRGVAKGVGNPVFYVGPPTGRDGIHGATFASVELSEESEAKKTAVQVGDPFMEKLVMESCLELIDSGIVLGIQDMGAAGLTCSSAEMASKAGNGLELYLDQVPQREEGMTPYEMMLSESQERMLFVVEPKDEAQAQEIFDRWGVICRKVGKVTDDGRLKLFHHGEVVGDMPVTALVDECPIYNKPSAVPAYYEENASVDTLRYAEVTDLGGALRTVLASPTVASKAWVYNQYDYMVRTSTAVRPGSDAAVVTIHGTRKGLAMTTDCNGRYVYLDPEVGGRIAVSEAARNIVCSGAKPLAITDNLNFGSPEKPEIFWQMERAVDGMAEACRVLDTPVIGGNVSLYNENASGAIYPTPVVGMVGLVEDTDHITTQAFKQEGDAILLLGVTKAELGGSEFQYAVHGLTEGRPPALDLATEQKLLDAVLGTIRGGLVRSAHDLSEGGLAAALAESCISGGIGANVELSANGLRPDVALFSESQSRIVLTAAPDRAEELKAAVAAYGVPVEIIGTVGGDRLRLALDGKTALDEAVTELKTIWEDAIPCLMK
>NZ_CP009241|710401:722277|716452_717949_+|WP_038585676.1|DBSCAN-SWA
MSYEIKTGKEQAAPILWTGDFYNEGTGSGDIFDTLKEECGVFGVFGHPEAASMSYYGLHALQHRGEESAGICVANGRDFNYHRGMGLVKEVFDKDKIASLVGDMSIGHVRYSTSGDSRLTNAQPLVFKYRDGDLAIATNGNIVNEPLIRKQLEQGGSIFQTTSDTEVLAHLIARSQKDFVEATKDALQQLVGGFAFLLMTNDKLIVASDPHGLRPLVMGQLGEAYVFASESCALEVIGAKLVRDIEPGELLVLDKDGFREDRFAEPKRKALCAMEYIYFARPDSDLNGSNLHSARKRMGSRMALEAFVDADIVTGVPDSSISAAIGFAEQTGIPYELGLIKNKYTGRTFIQPSQELREQGVKMKLSAVRRVVEGQRVVMIDDSIVRGTTSRRIVNLLREAGALEVHVRITSPPFKNPCFYGIDTPDRRELIASYKSIQEMCEEINADSLAFLSPEGLIQSIGGYNSDDYKGGLCLSCFDNDYPTQVDFGGEEKDGCSC
>NZ_CP009241|710401:722277|720729_722277_+|WP_038585686.1|DBSCAN-SWA
MSIKRALVSVSDKQGIVDFCRELSTLGVEIISTGGTSTLLAKEGVPVIGISDVTGFPEIMDGRVKTLHPAVHSGLLAVRDNEEHTRQMTELGLDYIDLVVVNLYPFAETIAKPDVSYEEAIENIDIGGPTMLRSAAKNHAFVSVVVDAADYAGVLDEVRAGGDTTLETRKRLAAKVFRHTAAYDALIADYLANVTGEPLPERYTVTYEKIQDLRYGENPHQKAAFYRKPLAAQDTLTAAEQLHGKELSYNNINDANAALQIVKEFEEPAVVAVKHMNPCGVGVGASVYEAYQKAYNADPTSIFGGIVAANRIIDADTANLLKDIFLEIVLAPGFTDEALEILTKKKNIRLLKIGSLSTASARKSSFVVTSIEGGMVVQESDVHSVNPEELQVVTSRKPTEEELKQLLFGWKVVKHVKSNAIVLAADDMTVGVGAGQMNRVGAAKIAIEQAGEKSKGAVLASDAFFPMGDTLEMAAKAGITAVIQPGGSIKDEESIKVANEYGIAMVFTGVRHFKH
>NZ_CP009241|710401:722277|719677_720292_+|WP_038585683.1|DBSCAN-SWA
MQYSRIAVFASGQGSNFAALVQAQNAGKLGRGRIELLVSDRPEALVAQRAEEAGIPALLLRPKDFASRELYEAEIVAELQRRDIGLVVLAGYMRLITPVLLTPYAGRIINIHPSLLPAFAGKDAIGQALDYGVKLTGVTVHFVDGGMDTGPVIAQRGVAVEAEDTAETLAGRIHQVEYELYPEVVSAFAAGKIGLDGRKATISE
>NZ_CP009241|710401:722277|713554_714244_+|WP_038585669.1|DBSCAN-SWA
MKFAVLVFPGSNCDIDCYKAVEDSLGEPVDYVWHTATDLSAYDCILVPGGFSYGDYLRCGAISRFAPVMAEVAKAAEQGKFVLGICNGFQILTEAGLLPGALRRNMSMKFRCHDTVLKVVNNTTPFTVDYAKDEEIVIPIAHGEGNYYCDEETLASLKANNQIVFTYSDNPNGSVADIAGVSNAAGNVVGMMPHPERAANSLLGSEDGKRMFTSILKTWRDRYDAASIR
>NZ_CP009241|710401:722277|712112_713003_+|WP_038585666.1|DBSCAN-SWA
MTHPAVSTAVDLVNAPLLYKGKVRELYDLGEQTLIVVTDRISAFDYVLDPAVPEKGNVLNRLSAFWFGKTKDLMENHVVHIDVDQLGDIARDREALKNRIMVVRKAERIDIECVVRGCITGGGWRQYQETGKVNGIELPQGLRKNAVLAQPIFTPAAKNDVGHDEDIPFEQMQELIGADLALELKEKSLKLFAFAKEYCEERGIILADCKFEFGLLDGKVILIDEIFTPDASRFWAKDKYSLDIEIDSMDKEPVRTYLAASSWDKNSTPDPLPLEVVEETSRRYLDIYHRLTGKSL
>NZ_CP009241|710401:722277|718637_719678_+|WP_038585681.1|DBSCAN-SWA
MSEAYKNAGVDIAAGNEAVERMKKHVKRTYRPEVMTELGGFGALFGLNKDKYEEPVLVSGTDGVGTKLKIAFAADRHDTIGIDAVAMCVNDIVVQGAEPLFFLDYLACDKVVPEKIEAIVAGIAEGCHQAGCALIGGETAEMPGMYSAGEYDIAGFTVGVADKAKLVTGANIAPGDTVIGLASSGVHSNGFSLVRKLLLEEDGYALNDVVPELGAPLVDVLLAPTKIYVKPLLALLEQLPVKGMAHITGGGFIENIPRVLPDHVNVEINYGSWPILPIFGLLQSKGNVSNRDMFTTFNMGVGLVLVVSAEDGEKALELLKAGGEEAYLIGTVTEGERKVTFTGAEV
>NZ_CP009241|710401:722277|713303_713549_+|WP_019913657.1|DBSCAN-SWA
MLKATVYVTIKKSVLDPQGVAVQGALHSVGFQEVESLRIGKYMELTLDTDNRAEAEGRLKEMCEKLLANTVIEDYRYELED

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038585664.1|710401_711697_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	2.0e-22	27.6
WP_038585666.1|712112_713003_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	9.9e-42	33.6
WP_019913657.1|713303_713549_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	2.2e-07	36.7
WP_038585669.1|713554_714244_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_038585673.1|714221_716468_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	9.5e-166	41.7
WP_038585676.1|716452_717949_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	1.2e-50	32.1
WP_038585681.1|718637_719678_+	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	8.0e-67	43.9
WP_038585683.1|719677_720292_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.9e-24	37.9
WP_038585686.1|720729_722277_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.1e-75	51.3

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP009241|2353246:2373453|DBSCAN-SWA
ATTGAACTCCGAGGAACGTGTATGGACACCGTATAGGGGACCATTTGACCCTTGTCCGCCGGTGCCGTTCAAAACGTATGTTGTGCCGCCCAACCAATTTATTGCTTTTCAGCCCCCGGGATTGCCGCAGTTTCCGTTACCTGAAGCACTGAGGGCGGGTACACTTTGGCCTGCCCTGTTCAGTCCGTATGAATCCAAAGCCGGCAAAGGAGGAATTTAGGACGATGGAAGCAAATCCTTGCGAGCCCCGTTACTATGAAATGCTGGAGCAGCTGCAGGTTCTGGATTTTGCCCTGGTGGAGCTTAACCTGTATCTGGATACCCATCCCGAGGACTTAAGAGCGATTGAACAGTTCAATCAGCTGACTCAGGAGCGCACCCGGCTGGCCAATCAATTTCAGGAGCTGTACGGCCCGCTGCAGAACTTTGGCCGCGCCTACTCCAAATGTCCGTGGGAATGGAGCCAGAGCCCTTGGCCTTGGCAGGTATAGCGGCACGCTGGCCCCGGCGAAGCGGCTAGGCGAATAAAACTATAAGGAGGGTTCGTTCCCGAATGTGGATATATGAAAAAAAACTGCAGTACCCGGTACGTGTCGGCAAATGCGATGTGCGGATGGCGCGGTATTTGATGGAGCAATATGGAGGCGCGGACGGGGAGCTGGCGGCAGCGCTTCGTTATATGAATCAGAGATATGCGATTCCCGATAAGGTTATCGGCGTACTCACGGATATTTCAACGGAGGAATCAGCGCATTGAGGTTATCAGTTATGAAAAAACCTCAATGCTCCGGTAGTTTTGGATATAATTTTAGATCGAATTTCCGCATCGTTTCCGGTTTTGACCAATGGCCCCTTTTTTCTTTACTGTATACCGCGCCTTGCAGCACTGATTTTAACAGTGTATTACGTTCTGCTGCATCCTCTATAGAATAGTACGTATCAAGTACATACTCCGCTAGTGGTATAATTCCATCTTTTGCCTCTTTACGATTTTTCTCCAGATTTAAATCATCATTCGCAACAGATAATCCCCTTTCAGCATCGGCAATTCTTTCAGATAAGTTTTGTGATCGCTCCATAAATACATCAATACTATAAACGCCACGTTCCAAAAGATCATGCAAAGCACTGGACTGCTTCCGTAATTCACTTAGATTTTTCTCCGAATCTTTAACAATTTGAGATTTTGCATTTAGTAGTTCTTCGGTATCCTCTGTCTCAACGGGCATATTGTTGTCCCATTTGGCCTTATACTGATTGATCCATATCCGCAGGCCTTCAAGGATGCGTTCTTCGACGAGTGAGAACAATGAGCTAACTTGCTTACATAATGGTGTTACACATATGAGGGATGGTTCAGCCTCACGCGAATATGGACGGCGAACCATCAAGCGTCCGCATAATGAACACCTAACAAGACCGGCTAAAGAGCTGGTTATCACTCCAGTAGGGGCAGGGGCATGATATCTACCCTTTAGTATTCTATGAGCTAATTCCCATGTTTCCTTATTGATTATAGCTTCATGCTTGCCTGGAACTCTAATCCATTGAGCTTCTGATACTTCAGAACGTGTTTTTAGCAACTTTCCATCTTTGCGAGATTTCTTCACAGGACGACGGTTCCATACAATATCCCCGACATATACTGGATTCTGCAAAATTCCACTGATTGTAGCAACCGTCCATAGTGATCCTTTTGCAGTTGGAACACCAAGGAGATTGAGCTTCTTTGCAATGTTACCCATTCCCATATTTTGAGTTGTATACATATCATAAATCATTTTAACGATTGGAGCCTGTTCAGGATGGGGCATTAGGCTATATGACTTGTCCTCTAACCGTATTTTACTATAACCATATGGAGGAACATTCCCGATGTAGTTACCATCTTTGACGGATTGAATCCGTCCGGCTTGCTGCCTACGGTTGATAGTTTTGTACTCTCGCCGAGACATGAATAATCCGAATTCAAAATATTCTTCATCGAATTCATTGTCAGGATCATAGACTTTAACAGGTGTGATAATCTTTGTGCCGCTATATTTAAAGGCTTGTGCAACAAACCCTTGATCCATAGTGTCACCCCTGGCAAGTCGTTCTATTTCCATGACCAGAATTCCCGCCCATTTACCATCTTCAACATCCTGAAGCAGTTGTTGCATTTCTGGCCGATCCGCTACCCTCTCGCCTGATACGATTTCTTTATACTCCTTTGATACATTAATATTCATTTTTTTAGCCAATGCAAGCAGCGCCGTCTGATGCTTCTTTAGGGTTTCTCCTTCGCCCCGAGCTTCAGCATCTATATCCGCACGGGATTTGCGTAAATAAAGAGCGTATTCTTCATACGAATTGTTCATGTTCAAATTGGCTACCTCCCAATGACTTCTAACACTATGTGATTATTTTATAGCAGATGGAAGTCAAACACCATAGCGTCATAAGTGGGACTATACGGAAAATTGTTCCACTTATTACAACAAGATTTTTTACTCTGATACCTCTACTATTGATACAACGTCATGATTATCAGAGGGGATTAAGGGTATGGAGATAATAGGAGTAAAAATTGAGGGCAGAACAGGAGAGGAAGCTGACTTCGTGATATTCCCGATTCATTCAGTGAATTACATCTCGATGTTTAGTATTGGCAAATCAGCAGAACCACTTCCTGCCTTTCATACTACCAATGGATCATATGTACCGATTGTAACTCTCCGAGATCTTTCAGTAGCTTTAAAGCAGTTCGGTTTTACTTACTATGATAAATCAACTTTGGTCAATAAGAATCGCATTAAAGGTCGAAAAAGAGACAAAGGTGTCTTAATTGTGACGTTTGTCGATAATTCAGAAATTGCCGTTGCAGGGCGAAGCCGCTATAGATAAATAAACGCTGCAATTGAACCCCCTTGAGTTGTGAATAGGAAACGACATTATATGACATAAAAGTCGCTGCACCACATGTATAATATAAGAACAGACGGTTTACTGCAGTTTTTACTTCAAGAAATCTTGAAGTTCACGCCGGATCGGGAGGAATTACCTCCGCGTCTCCTTAGAATTTTTAGCAGGAACAGCCACTTCACGCCAATGATACAACATATCGCAGTTAGGCAACTTTAAAGCTTCGCTTATTGTCTTTGCAGTTGCATATCCCATGGTAGTGCGATTGTGTGCATAATCGGATAACTGACTTTCGGGATATCCAGTGATGATATGTAAATCTCTTTGGCTAATCCCAGTTTCCTTATAAAATTCCAGAAGTCGACAACGATCCGGTATATACCGCATCGCCTTACTCCTTTTCTATTTAATTACATTAGTCTCCTCGTTTACGAACGTTAGTTCCTATGTTAAGATGAACTAAATAATTCACCATGAACTGGAAGGTGACTCCTATGGACGATAGAGAGTACATAATACAATTAATTACAGAAGCCGAACCTGAAGAAATAAATTTATTAGCTGATTATCTAAGATCGAAGGAAAGAGAATCAAAGAATGCATCAAAATTATTTAATAAATCGTTTGACTAATATTTTTAAATCTGGAAGGTCTTCTTCTGAGGCTTGCTTTATCATTTCAATTAGATCTTTTCTGTTTTTAGATGTTTCATCATCTTCGTATTGTTGCTTCTTTTCTTTGATGTCAGATATGTTATTATAAGCATTCAAATCAACCCTTGCTGAATAATTCGTATTTGCTGCATAGAACTCTTCAAGTCTTTTCGTTATTCTATTTGACAGAAACTCAGAAGCACCAAATGGATTGGATCTAATGAGGTCTTCATCAATTTCAATGTCAGTAAAATAACTAAGGGTACTTAACATATTATTTAGCAAATCTTCCTCTATAACCTCAGTAGTTAGAAACCTATTTTTAAAATCCCTTATTGCATCTAATGCAGATAAACAATGAAATTGTAAAGATTCATTTTTTAGCATACGATGAGAAGCGTTGTACTCAATGAGGCCCTCCTTTATTTCCTCGGGGGCCTTTTCTATGTGCCCAGCCAGTAGTAAAGCGTCAGTATCTCCTCCAGTGACTTCAGCAAGTGCTCTGGTTACATCTTCAGAAGCAGGGGGCTTGTTTCCATTTTTTAGTTTACTGATATAGGAGCGATCAATTTTAATATTTTTATTCGAAAGTCTAATTGCAATTTCCCCTAAACTCAATCCACTTTCTTCAATGTATTTTGACAACAATTCAGAATATTTCACCCTCACTCCTACCTTTCATTTCAAAATCTCAATCTCAATCATATATAGTGTTGACTTTAAAAACAACGATTTGACTATTAAGTGCCAAAAAAGTGTTGACAAGAAAGTCACACGTTGGTACTATGTAGTCAACAGATCAAGTGACTTAGAAGTCACTGGTGATTAAATAGTCAAGGAGGCGCCAAATGAACCGTTATACAAAATTATTAAGGAAGCTTATTCATGATTCGAATCTTTCATTGTCTCAGATTTCTAAACTACTTCAACAAAAAGGCCTTAAAACTGAAAAGTCTTATCTGAGCAAATTGCAAAACGGGAAGTTATCACCAGCAAGTGACCAAATGAATAAAGCATTAGCTGAAGTATTATCATCTGATCCTGTCGAGTTAATGGCAGCTGCCTACCGCGAAAAGATACCACCTGAAGTACTGAAACGACTTTGCACCTCAGCATAGACAGGAGGTAGATACAATGGCTGTCCCACTCAATGAGCTGCATACACATAGATCAAGAGGTGATGCGGCAGTGAGCACTAAAAACACACTACCAGAAGGAAATGTAGTTAAAACCGTTTGGATCGGGGAAAGCAAAATCGAATTCTGTGATGATTTTGTAGCCCGAACACCAGAAGCTATCGCACAAGTAGAACGAGAGTTTCACTTGGCAGGTTGGAACATTGTTAAGAAGCTCCGCAAACAAGGCATTTATATATAACAAATCCCGCCGTGCATAATCGCAGCGGCGGGCGGGGAATGGCATCGGCAAGGGGAATTGCTTGGTTTAATCATACATCATGCCTCTGTCCAATAGCATCCCCATAACTTGGACAAAAAGGAAGGATATTAGGTGGCAATTGGACATTTTCCTACAGCCCTACAAGATGTGATGAAACGTCAGGGCTACACATTAGCACAGGTTGGCAGAGCAGCAAATATTGACGGTTCCCAGGTTGGGAAAATCGTTAAGGGTACGCGAAAGGCATCCGAGCCGGTCATGAGAGCCGCAGCTGAGCATTATGACGATGGACAGTTGTTCCTCGCGGCCGCAGCCGAAGTGACCGGGGGAGCTTTTACCCCATGGCTGGACAACGTAGACCTACATAGAGCAAGTGTCCTATTTAAAACCATAGAGGAAATGCAGGAAGTGCTTGATGCTTCTAAACAAGCTGCAATCAGCAAAACGAATGAGCAGATTAACGAAACCGAGCGCCAACAGATTAAGCGTCTGCTAATGGAAACGGTGGAAGCAATCACGGCGCTGAGTCACTTAGCCGCAGCAATTTGCAAGGAGTATTCGTTCAGTTGGTTGGGGACCTGGAAGGAACATCGGGCTGAGTTGAAGCTTAAAAACTATGTGAAATGAGGTAGAGGGATGGAAAGAACAGCGTTGGTTGCCGAAGCGGTAGCAACCGGGAAGACTGCTCCATACAATTTGCGAGTGATCCGCAAACAGCCGGACAAGATGTTGCCGGGGAAAGTCAAAAATGCAGAAGTTTATCTGAACACCATGATCCGCATAGCAAAAGCAGAAATGAAAAACGACCGCCGGTCAGGGCAGTCGCAGTTGAGATTCCGTCTAAAGAGCCTCATTGTGTCCATTTTAACCTTAGACCGAGCGGAGCGCAAGGGGGGGCAAGCGGTATGATGGACTATGAGTTTTATTATCGCCATAATTTGAATACTTTTGGCGAGTACAAAGATGCATACAAAAATAAATTTGAAGCAAGGTCTATGAGCAGCAGATTTTTTGTTCTTAAGGTCAATCGTATTTTTGAGAGAACAGAAACATCGGATGAAGAGAAATTGACTGAAATTAGAGCTATGAACGACGCTTTCAACGATAGCTTTCCCGCCTGATGAGGCCTGAGGGATACAGGCCGAAACCCCGCAAGGGGTCGCGGATATCCGCAAATTTGCTGAAAGGGGAAAGGCATAATGATTCCAGATCATTTGTTGCAGGATCGTTACTGGCGGGGGCTGATTTACATTTTCACGAAACATGCAAAACTTAGTCATTTTCTTACACCGGAATTTGTTGATTTTGAAGAATTGTCCGTTCACGTTGACAAGCTCAAGAAAGTTTCCAAGGGATGGAGTACTTCTGAAAAGTTCATGCTTGCAGTTGCATTGCACTTGTTCAATGGACGAAACAAGTTTGACATGTCAGAGGCTGACCGCCTGGACGACAGAAACACCGAGATTCTAATACATGCCCTACGGCTGCGTTACGCGATGTAAGGGGGCGGGGAATATGCTCGTACTCAAAGGCGACACCGTTAGGACTAGCTCCGGCCTGTCCGGTGAGATCACAGATACATGGGGTTTAGCTCGACCTTGGGCTAAGCTCCGGCAGGAAGATGGTAATTTAGCCTTTATCCTCCGAACGGATGTGACTGAGATATTAAAGCGACCGCCGGTTAAGAGGGGAAAACGATGATAAGGCAGCAGAGGTGAGAATATGCCCGCAGATAGCTTTCCCTTTCCAATGTTCTCGGGGCTGCTGACGCCGGATCACTGTAAAAAAATTGGCTCAGCATTATGGCTGTTTGTCTGGTGCATTAGCTCCACTACCGCCGAAGTCGAAGACGATGGAACCGTTTGGGGGATTGTCCTTGGTGGCAAGCCGATGAAACTATCTGAAATCGGCGCGAACTTCGGGGTAAAAGACAAAACAGTCAGTAGGTGGATCAGTGATCTGCAGGATCATGGATACCTTCATATCACCAGAGCGCCCCGAGGTTTGATTATCAAGGTCAAACATTCGAAAAAAGGGCTTTTAAAGCGATCAGACAAAAATGTCCGATCATCAGAAAGTGATCAGACAATTTTGTCCGATCAGTCGGACAGTGATCAGACATATTTGTTCGTTCATAGCGAAGGTGATCAGACAAAAATGTCCGATCATGGGCCGGAATTGGGTAGTGATCAGACAAAAATGTCCGATGCAAAAGATATTATTACTACTACTACTATTACTAAATTAGAAAAAGAGTGGTGGGAAGAAGAACCGAATCAAAACCCACCCGCCGACGATGGTTATCTTGCCATCTTGGATGCTTATTGCAAAATGCACTCAAAATTCGATATACACGTCTCAACTGCTGAACGACATGCCATGGGTCAGATAGTCGCCGGAGGGATTACGGCCCCTTTTACTATCCAAACTATGGAAACCATGTATAAGGCGAAGCAGGCCAAGCAAGCCCGAGACAATGAACCTTTTGAGCAGCCAAACAGCTTTGCTTATTACGTAAAAGGCATTGAGGAAGCTTGGCGGAAGTCCCAGGGTGGCAGCAAATCTTCTAGAAAGCCTAAAACTCCGGCAGCTCAGTCAGAGCCGCCGCGCAAAACTAAGCAGCAGCAGGAACTTGAAGACCTGAAGCGTCGAGCAAAGGAGGCTAAGGAGCTTGAAGAGAGCACAAGTTATTGACTTGCTTATTAAGCTCAAAGAGGAATATGCACATCAGATCGACACTAGCGATCCTGAGATAGACAGGCTTTATGAACACCTGAAGGATTTCCCTTTTGATGTGGCAGTTGAAAACGTTCGGAAGCACATTCAGACCAATTCCTTCCCACCAAAAATTAGCCAGATTCGCGGCAAGGTGGGCGACCTTCGAGAAATAGAGCAGCAGAAGAAGGAGACGGCCGAATACTTGGCCCTAAGAGATGCAGAGCGCACCAATGTGGTACTGCCGCCTGCAGGATGGAAGGAGTCACTTTATGCAAAGCTCGGAATTAATACGCGAACTACCGAATAGCCCGGCGGCAGAAGCAACGGTTCTCGGTGCAATCCTTATTGACAAAACAGGGGATGCCGCAGAGATTGCGTCCAGTCTACAGCCTGACACATTCTTTAATCCGGCACATCAGCAGATATTCAAGGCCATTCTTGAACTGCACAGAGAAGATGATCCTATCGAGCTTCCGGCGCTTGTGAATGAGCTAAACCGCATGAAGCAGTTGGAGAAGATCGGAGGGGTTAGCTATCTGGCTAAATTAGCTCATGCAGTTCCGACAGCGGCAAATATTGGCTATTACATCGGCGTTCTCGAGGACAAGCACACTTTGCGCAAGGCAATTTATGCGGCTGAACGGCAGATGAAACAGGCGTACGAAAGTGACGATGCCGGGCTGGTTGTTAACAGTATGTTGAACGAAGCAGCTGCTTTATCGGATCAGGCTTCCTCTGACGATGATTTCCAGCCAATAAAAAAGGTGCTGTTCAAGGTAATCGAATCAACGGAAGAACGTTGCGAAAACGTAAAGAACGGCATTACAACGGGGCTTTATACCGGATACACGGATTTAGATGGTATGCTGGCTGGCTTGCATAAAGGTGATCTAATTATAGTCGCTGCCCGTCCATCCGTAGGCAAGACGGCGTTCGCGCTTAACATCGCTCAGAACGTGGCAGTCAAAACCAAGGAAACTGTCGCAGTGTTCAGCCTTGAAATGTCGGCCCCGCAGCTAGTACAGCGCATGGTTAGCGCTGAAGTTAATCTGGATGCCAACGCAATGCGGACAGGTGAAATGAAGGCTCATGATTGGGATAAGATGGCCGGGGCTGCTTCCATTCTTGGCGAAGCTAATATCTTCATTGCAGATCCGGGTGTTATCACTGTTCAGGAGATACGCACGCGCTGCCGCCGATTGAAGAAGAGCCAAGGTCTTGGGCTGATTGTTATTGATTATCTGCAATTGATTCAGGGCCGGGGCAAAAGCGGCGATAACCGCCAGCAGGAAGTATCCGAAATCTCGCGGACGCTGAAGCAAATTGCCCGGGAACTGGACGTGCCGGTGATTGCACTTTCCCAGCTCAGCCGGGGAGTGGAGCAGCGCCAGGACAAGCGCCCGATGATGAGCGACCTTCGCGAGTCTGGAGCTATTGAGCAGGATGCGGATGTTGTGGCCTTCCTTTACCGGGATGATTACTACAACGCCGATTCGGAGAAAAAGAACATCATCGAAATTATCATTTCCAAGCAGCGTAATGGCCCGGTAGGAACCGTTGAACTGGTGTTCCTGAAGCAATTTAATAAATTTGTCAATTATGAACGGTCGCATGCTTCATGAAGCAGTGCGAAGTAAACGCACATAGAAGGGTAGTGAGAAATCGAATGAAGGATACCAAAATATTAATTCCTGAAATTCCGAAGGAATGGACGGAGCGTATTCGTTCCGGTAATACGAATGTCTTTAGAAGAGATGAATTTCCGGAAATTCGCCTTGAACCTCCAATCATAGGCCTCTACGCTGAAAAATTCGATGATGCTTGGTACTGGGTATGTGGGTGCCACAAATGCCTGGGTAACGGAAAACCCTACTCTTATATTATCTGCTATGAACATGACAGATGCGTGACCTGCGGTACACATCGAACTGAGCTGAACGAAATACCCTGGGGTAGACCGGACGGATTTCAGTGTAAGCCATGCGCAGAGAGGGAGCATGAAGAATATAAACGCGAGGCTCTCGAAGAAGCTCGGGAACGAGGTCATTCTGAGAATGACTGCTGGTACACGGCAGATGTTCTTTGCCCGGTGTGCGGATCGGAATGTTCTGATGATGGTATGCATGACAGCAGGCAGCACGAAGTTACCTGTAATGTCTGTGACACAGAATTCATTGTAGAAGTGGAGTACGAGGCAAGGTATACATCCAGGCTGAAAGAGTAATGTCGCAGTAGACGCATATAGCGAAGGAGTGAAAGTAAAGTGACCTTTAAAATTCTTAAAGAACAGAAGTACTTTCTTAATATTGGAGTGAAACGTCCTGAAGGATTCACTGGAATTATGACATCCAGTGAGCATATTGCAATATACAAAGGGAAAAGGGAAGACGGAACTTTCATCTTTGATGAAAATGGTTCTGAATTACTGGTAAATCCAAGCGATATCAGAGGTATATCAAATTTCTGAGTTTTATTGAACAGTTCGAAAAGAAAAGCGAAGGAGGAATAAATCATGTCTGTAATTGATGTGAGGTATGTAGGGACGACAACTGACGTTTTTACGGAAGGAAAGATATATGAGCGAGCTTTACTTATCACTGACGGTAGTCTCATCGTCGTTAACGATCAGCGTAAATCAATTGATTTTGAAGCTGGGGACTGGGAAAGCCTGTTTGTAAAGTTGGGAGTACACGGGAGTGTGGTTCGCAGAGAAGGACTCTATAACAAGTATCAGGTCTTCAACCGCAAAAGCGGACAGGAAGCAGAGGGTCAGTACTTTGTGCTTAAGCCCGAAAGTGATTATGCTGCCCGAGTTGCGCTAATGGCTTATGCGGAAGCTGCCGACAACCCGCAGCTGACTATGGATATCACGGTATGGTTAACTGGCCTGCCTCCTCTTGGCAGCAAATCAAAGTAGTGCGCAGTACGAAGATACCTATCAATAAGAAGTGGAGGCGGACGAATTGAAAGTCGGGGAAACCAGAAAATTCGGTTATCGAGTAAATTGCTTCATCATCAACGAACTTGCCAGGGTCATCAGTACACATAAAGTTTCTTCGGGCCTCAAGGTTGTAGAAGTCGAGTTCAGAAATGGTAAGGTACGGAAATATTCACGGCAACATCTGCCGAATGATTGAGCAGCACGAAGAAACAATGAAGGAGTGAAGGATAATGAATAAAAATCAAATTGGTTGCGTGGAACATGCTTTGAGAAATCAAAATCGGTTCTATGCTTCAGCAGACGACAAAGACTGGAATGACCTTGTCAACAAAGGGTATGCAACCAAGCACCCAGGCTGGGAAGATAGCATGGCATATTTCCGAGTAACAGGTAGCGGTAAAAAGGCCATGAGTGAAGCTGATTAGCGAATGAATCTGTGAAGGAGGGATTCCCTGATGAGCACACTGTCCCCTATTCATCCACAGGCTGTGCAGATGATCAACAAGGCACTTGCCGATGTAATCCGCAGAGGCAGAAAGTTCGAGCGCATGAAACTCTATGTATGTCCTCGTTCTGAATTGGCTCAGCGTTCAACAATAAAGACAGCGTTTGGAGATTTGCGGATCTGCACAAGTGAGTACCTGTCAAAAGGCTATTCTTATATAAGAGAAGATTTGATCGCCGAAGAGATAGGTTTTGCCTGGGTCTCCTATCCAAAAACGGCGAATATTACAGATAATCGAAGAAAGGAGGCATAAGGGTGATCATCAAGACAGTGAAAAATGTCAATTCACCAGCTGGCTGCATTGTTTCCGGGGTTTCCTTCCGGGCGCAGCGTGAACGCGGTGGTTACAGCATAACATTCGGGGAATTCAGAGGTCAGTACATCCCTGAATCATCTGCAATCATACTAAGTGATGTTGTATTGAATGAAGACGGAAAGATTCCGCGAGGTCAAAAGTATGCTTAATGAACATGCAAAGACCCCCTAATCCTTGGCCGGGCCGGGGGTCAATAAACAGTAATTTCTACCTCAACCCATTATAACACAAAGGGGATTGAGGGGAATGGCAATGGTATGGGAGCAAGGGGAATTGTTTCCGAGTGCGAATAAGGCGGATATCGTGGCTACCAAAATGCTACTTCGTAAATATCCCAAAATGGCAGGTATCGTTAATGACTTAAAAGGTAGAAGCGAGCTTACGGCAGAAGAAGCAGCCACGTTGAAAAAATGGACTCCGATCATTCTGAATATCGAGTTAGCGATTAAGGCCATAACGGATGCTGAAATTAGAGAAATCATGAAATATCGCTTCGTTGACCTACATCCACGCAAAGCAGCAGTGATTAAATGGTCTGCCTTCACCGGGCGCTCGCTGGATCGGAAGATTCTGGAGGGAACGGAATCGGTAGCCGGTACTCTGAAACTACTCGGTATCATCTAAAACGTGTCTGTATTGCGTCTGTAACATGTCTGTTTTGGGTCTGTTTTACGTCAACATTGCGTCTGTATATTGGAATTAAAGTAGGGACATAGGACGGAAACATCGTCCGGGTGTCCCTACTGCCCCTTATCGCGGTAGGACTCTTCAGAGCTGAGCAGTGTTGATGCCCGTTGTGATAACAACGAATTTAGTGGCGGAGCTGATAGCACTTGGTGCGGCGGTCTGTTCGGGGGAATGAGAGTTATAATATCACTCTCAACGCGCTCCGCCTGGGCGCGCTATGAGCACTAAAAAGGGTGCAAATACGGGCTAATATATCAAAATTTAACTAAGGTCGCTCTCGGGCGGCTTTTTTGCTGTCCATGAATGCGGGTGGTGATATGAAGACTGTTCAGCCGATCCGAGACGATCGGATCATAGAAGGGATGAAGCATTATTTTCGGAGTCGTAGTATGCGGAATTACCTGTTCTTCTGTATCGGGATATACTCCGGCCTTCGTGTCTCTGACTTGCTCACAATCACAGTAAGAGAAGCCAGATACAATTATATAAACAAGGTGGAGAAGAAGAATGGGCACAGCAAAAGATTTGTTGTTCATCCTAGTATTCGCTCTGATTTGGATACATTCATTGCTGATAAGGCGGATGACGAATATTTGTTTGCAAGCAGACAAAGGAAAACGATAAGTCAGCTCAAGCAGCAACCGATAGACCGCTCAACGGCCTATCGCTTTCTTAATGAGGCAGCAAGGAAGTTTGGTCTTGAGGAGTTTGGCAATCACACGCTTCGAAAAACGTGGGGATATCGACTATATCAACAAGATGAGCGAAATCTCGCGTTACTAATTGATGCATTCGGACATAGCGATATGAGGGTTACATTGCGCTATATAGGCCTGACACAAGACCTTTTAGACCGTGCAACCATGAGAATGCGTTGATTCTACCGCACCACAATTCAACGTGTGTCGCACTCAGTAAAAAGAGGCCGGATGCATTATATGAAGGAACAGAAAAAAATGGTGGATGCTCTACTGCACCAGAATTCCTTTATGGTTCACTCAAAGCCTGTTTTTGAGGGGTTTAGCAGCAGCAGCCTTTAGGTCGCTAAAGTAACGAATGTAAATAACTGTTAAAAGTGTACTGTTCAAACACGAATGATGTGCGGAGGTGTTGTAATGAGTGAGTAGGGGCCGCAGTGAGAACCGTGACAAAGCATTTCGGATGTGGGAGAAAAGCGGTAGAACGCTTCCGCTGGTAGAGATTGCAAAGCGCTTGGGTATCGCTTCATCGCTGGTGCGTAAGTGGAAACATGAAGATGCATGGGAGGCGCGGCCAAGTCGGAAACGCGGCGGTCAGCCGGGGAATACGAATGCCGTGGGCAATAAGGGTGGTGCTGCTCCGCCAGGTAATTCAAACGCCTGGAAGAATGGGAACTATGAATCCATGTGGATGAGTCAGATTGCGGCTGAGCATAAGCTGCAGCTCATGAAGATGGAAACAGACCCGCGTGAAATCCTGCTGAATGAAGTCAGGCTGCTTGAGTTCCGCGAATACATGCTAATGAAGAACATGAAGGATATCGAGGCCGGAGAAGATCGGCTCAGCATAGAACGGAAATATCAATTCTATGAAGAGGATGATGTTGAAGCAGGCGGAGCAGAGATGCTGCGCTTCGTGAATGATGTTCCTGAGTTCCAGCCGGTCAAGGTTGTGAAGAAGCAGATTGTTGAAGAGAAGACCAAGGAGCCGCAGAAGATGGAGCGCATCTTGCAAATACATGGCGCTTTAACGGCGGTTCAGGGCCGGAAGCTCAGGTGCATTGCTCTACTGGATCAATTCGACCGCAACGAGCTGACGACCGACGAGCTGCGGCTTAAGGTTGAACGCATGCAGCTTGAAGTGAATAAACTCAGATCGGAGGCGTGGTGATGGCACGGCATGCAATACTGCAGGCGTTTTACACATCGGAAGTATGGCGCTTGTTCCGGCTTACCTTAATAGGAGAGCGCGGCAATGGTTGCCAGCGCTGCGGCCGGATCATCGCCAAATCCGTTGATATCATTGGTCACCACAAGATTGAGCTAACGCCTGAGAATGTCAACGACCATTCAATCAGCCTTAACCCGGATTTGGTTGAGCTCATCTGTTATGACTGCCATAACCAGGAGCATAAACGGTTTGGATACCAAAACAGGAAAGAAGTCTTCTTAGTCTACGGCCCGCCGTTGTCCGGTCTGTTGGAGCTTGTGCGGCAGCAGATGAGCCGGGGCGATCTGATCGTTAACATGGACATGCTGTACTCGGCGCTGTCCGGCCTGCCTGATTATGACAAGCCCGATGCACTGTTCTCCAATGTGATCGGTGTTCAGAACTTCCTTATCGACAACATCAAGACGAGGCTGGGCAAGTGGGGCACAGCTTGGATTGTCGGCGGATTCCCTGAGAAGTTCAAGCGTGATCGGCTGGCCGAAGAGACTGGTGCGGAACTGATCTACTGTCCAGTAAGCCGGGAGGATTGCCTTGCAAGGCTGGAGAGCAATGAGGCGCTGCAGTATCGGAAGGATGAATGGCGCGGGTACATTGAGAAATGGTTTGAACAATACCGTGAATGAAGGAGGTTTACTATATGGCAGAGGTATGGGTTCAGTTTAGCAGAACGACTGAAGAGGCAAGTGAATCAACCGAATACACCATCCGGGAAATTACGGAAGAAGCAGCGATCAATTTTGTTAATGACTTAATCAAATCCAATGAACCAATCATGGATACTGGAATTTTTTATCTCGATGGTACCCCCCCTGAAAAAGTTTAAAAAAAATATTTTGGGAACCGTAGAGGGGACACAATTTTGGTGTAAACCCAAAAATTTTGAATTTGGATTGAGGTGTTGAAATCTATGGAAAAATCGGAGGTCTACAGCCAAGAGTTGGCGAAGTTGCAGGACATCTTTGCTGATGTTGATCCTTCAAAGGCTCAGCTTGTTGAGGGTCTGCTGGAGGATGCGGCGTTCCTGAAGGCTGAAAACACCGTTCTGAAGAAGGCTCTTAAGATAACGGGAATGGTGAAGATCCATCCGACAAACCCGGATCTACAGAAGCCGGTTGAGGCAGCTCGGCAATACCTGAAGAACGTCAACTCCTATTCGGTCATTATTAAGACGCTGAACAGCATCTTGAACAAGAACATCATAGATGAAGAAGACGATGATATGAAGGAATTTGAATGAGTGCGCCGTTTGCATCATGGCTGCATGAGTACATGTCACTATGCCGAAGCGGTGAAATATTAGTCGGGCAGGAGCTGCTGCAAACGTTCGATATTTTAGACGAACACCTGCGAGATCCCAACATCCGATTTGAACCGGAAGATGGAAACAAACGAATTAAATTTATTGAAGAGAAGTGCCGTCACTTTGAAGCGCCTTATGCGGGAAAGCCGTTCAAATTGGTATTGTTCCAGAAGGCGTTTATCACAGCTTTACATGCTTTCAAGATATTCGAAGAGGAAATTCAGCGCTGGGTACGTCTTTTCCAAGACGTACTATTTGTCGTGGGCCGGAAGAATGGCAAAACACCGTTAATCGGGGCCATGAATCTGGCTGAGTTCTTCTGCGGGCCAGAGGGCATCAAGATTCTTTGCTCCAGCAATGACTATGAGCAGGCTTCACTTATGTTTGATGCCATTAATGCCATGCGGGAAGAGAGTCCATCCCTTGAAAAGGTGACACGCAAAAACCTAACCGGCATTTACTTCGGAAACCCGAAACGCCGGAAGAAGAATAGTAAATTCAGCTACCGGAATAAGGGCCACATCAAGAAGATATCCGCCAAAACAGGTGCGAAGGAAGGCCGGAATATCGCGGTGGGCGCTGCGGATGAAGTCCATGAAATGAAGGACAACAGCGGCGTGATGCCGATCCGCCAATCCTTATCCACCCAGGATGAACCATTGTACTATGAGCTAACAACTGAGGGATTCACCAATGATGGATATCTGGACGGCAGGATGGTAGAGGCTCGACAGGTGCTGAGCCGGGAATTGCATCGCCCGCGCTGGCTGGTGTGGATGTACACACAGGACAGCGAACAGGAAGTATGGCAGGATGAGCGCACTTGGGTGAAGAGCAATCCGGGGCTTGGCACAATCAAGAAATGGAGCTTCCTTCGCGGGATGATGGAAGAGTCCAAGACCAACAAGGCTACTCGTATTTTTGTGTTGGCAAAGGACTTTAACATCAAACAAAACAACGCAGCTGCTTGGCTGACTATGGATGATATCGTCAACTCCAAGGATCAAACATTTGACCTGGAGGAAATGCGTGGGCGCGTAGCTATCGGCGGGGTGGATCTTTCCAAGTCTGGCGACTTGGCTTGTGCAAGAGCGTTGTTCCTAAAGGATGGTAAGAAATTTACGGTTTCGCAATACTTCATTCCAGAGTCGAAGTTGTCTAATCTTTCGAAAGAGGATTTAGAGAAGTACAAAGAATGGATTCGTCAGGACAGAATTACGGTGAGTCCAGGGAATGAAAATGATTTCCGTTTGGTTAGCGCCTGGTTCGTGAAGCTGGTCAAGGATTACGGGATTCGCTTCTTGAAGATCGGCTATGATAAGTGGTCCGCCGTTTATTGGGTGAAGGAGATGGAAGAGTACGGATTTGACATGGTTAGAGTCGCCCAGGATTGGGCACCGATGTCGGAGCCGATGAAGCTCGTTGAGGCAGACTTAAAAAGCGATCTGATTCATTACAACAATGACGGCCTGGATAGATGGTGTTTGGAAAACACGGCGATCACAGTCAATTCCAAGATGGAGCAAATGCCAATCAAGGTGCAAGGGAAAGAGGACAGGAAAATTGATGGAGCGGTTACCCTAATTGTTTCTTATCGGGTGTACATCGACAATCGCAGTGATTTCCTTCGCCTCTGCGCTTAGGGATTGGAGGAAGGAGGACAACAATGTGGCGTTAATTGATAGTTTGAAAGGGATTGTTACAAAATCGAAGGAATTCATCAGAGCCAAAATGTTGAGTGGTTACATGCCTGTCTTCAGTCGGTTCGGAAATGATATCTACGCTTCAGACGTGGTGCAAAACTGTATTGATATTATTGCAACAGAAATCAGTAAGCTTCAGCCGAGGCATATCCGTACTGACAACAATGGCATCCAGACAACACCGCGCGGAAATCTGAACAGACTTTTCAAATTTGGGCCAAACGAGTTAATGACGACAAAAGATTTCTTGGAAAAGATCGTTTGGCTACTCTTTATGAATTTCAATGTGTTCGTTTATCCGGTCTATACAGTACAACGGCGCGAAGATGGTTCAGAAAGTCGGAGTTTTTCTGCGATGTATCCGCTCAATCCCTATCAGGTTGATTTCCTTCAAGATCCTGTTGGCGGTTTGTATGTGAAAATGTTTTTTTCTTCGGGCGAGAACTTTACGGTTCCTTACTCTGATGTGATTCATATCAGAAAGCGGTATTCAATGAATGAAATCATGGGCGGGGGGCTGAACGGTCAGCCAGATAATGAGGCGCTGCTGAAGATCCTGCGGATCAATGACACCGTGCTGCAAGGAATCGAAAAAGGCATCAAGACAAGCATGTCCATACGGGGAGTGCTAAAGATTGCAACCATGATGGATGATGATACGCAGCGTAAGGAGCGGGAGAGATTTGAAAAGCTAATGGCTTCAGGTGATTCCGGCATACTCCCGATTGACTTAAAGGGAGATTTCACGCCTGTGTCCATTGATCCGAAGATGGTGGATAAAGATACGATGGACTTTCTTAAAACTAGCGTTCAGGAATGGTTCGGTGTTTCTTTACCTATGCTTGCCCGTGATTACAATGATGAGCAGTATCAGGCTTTCTACGAAAGCACCTTAGAACCTATTTTAATCGGACTCAGTCAAGCCTTTTCAAAAACGATCTTCAGCCCCCGGGAGCTTGATATGGGGAATGAGATCGTTTTTTATCAGCGGGACATGATGTACCTCAGTACAGCGGCCAAGCTTGAATTGATCAAGACGGCAGGGGAGCAGGGGCTACTCAATGATAATCAAAAGCTGGCTCTGCTCGGTTACCCTCCACTCCCGGATGGCAACCGAATTACGCAGAGCCTTAACTATGTGGATCGAGCCATCATCAACATCTATCAGTTGAACGGAACGAAGCCCCAACCTACTAAGGCGGTGAAAGAAGATGCAGAAGAATAAGCTTCCGGTTATGCATGAGCCGGAGCGCCGGGCGTTTGTTATGAATGATCTTCGGACAGATCCGGCAGGGAATATCATGGAAGGACATGCAGCCGTGTTTGATCAAGCAACCGTTATCGGAGGCTGGTTCAAGGAAATCATTGAGCGCGGAGCATTCGACAAAACCGATTTTAAGGATGTGATCATGAGCGTCAATCATGACCTGAAGCGGATTCCATTGGCTCGAAGCCGGAATAACAATGCAAATTCCACACTTCAACTTCAAGTGGATGAGCAGGGGCTGAATACGAGGGCTGAACTGGATGTTGAGAACAACATGGAGGCTAAAGCTTTATACAGCGCAGTTGGGCGAGGGGACATTTCTGGAATGTCCTTTATTTTTACTGTACGGGACGAAACCTGGGAGGGGCTTGATACAGAACTTCCCACCCGCCGCATTAAAGACATTGGCCGAGTGATTGAAATCTCTGCGGTATCCTTCCCGGCTTATGACGGGACTGATATAAATGCTCGTGACCAGCAGGCACTGGATAGCGCCCGCGCCGCACTGGAGAGTGCGAGGTCTGGACTGGATAGTTCATTGAGCGATTTGGATTTGGCAAAAGAGAAATTGAAATTCATCTAATTAACTGGAGGTTATCGAAAATGAAAGATTTCCTGAAAAAGCTTTTGAAAAATAAAGAAGAGGCTCGCTCTGCTCTTAAAGACAAGGGCTTGAAGAGCAATGACATTGTAGAAGTGCGTTCGATTGGTGCACAAGTGGAAGCTATTGATGCTGAAATCGCTGAGCTTCGGCAACAACTGGAGTCAATGCCTGATGATCCAATTGCGGGAGGGGCCACACCACCAGAACCCGAACAACGGGGAGCGGGACAACTTCCTGCTGGAAATGCAGCAATGGCTCAGTTCTTGAAATCATTCAACATCGGAGGGCAGTCGCAAGAACGCTCCGAGGAACCGGCTGACCCTTATGGAACTGTTGAATACCGGAACGCCTTTATGATCTTCGCAAAAACTGGCGAGGTTAAGCCGGAGCTGCGAGCTAATGCGACAACTACTACAGCTGATGTGTCGGCAGTCATTCCGACAACCATCCTTAATGAGATTATCAAGAAGGTAACCGTCTATGGTCAAGTCTTCAGTCGAGTGCGTAAGCTCAACATCAAGGGCGGGGTTGAGGTTCCGATTCTAACTCTCAAACCAGTGGCAACGTGGATCGGTGAAACAACGGTATCCGACAAGCAAAAAGCGCAGGCTAACACCAAACTTACATTCACCTATTTTGGACTGGAATGCAAAGTGGCTATTTCGCTTTTGGCAGATACAGTTACTCTTGCTGGATTTGAAACGGTAATTACTGATTTGATTGTTGAGGCTATGGTACAAGCAATTGACCTGGCCGTAATCAAAGGTACAGGCACGGGACAGCCCAAGGGGATCACTGTTGATACCCGTGTTCCGGCTGCTCAGATCGTATCTATGACACCAACCGAATTTGCAAGCTGGGAGAGTTGGTCAAAGCTTGTTCTTGCCAAGATGCCCCTGGCCTATAAGGCTGGAGCAACGTTCTTGATGGCTTCCGGTACGTTTGAAGGCTACATTAACGGGATGGTTGATGATAACGGTCAACCTATTGGCAGGGTTAATTATGGCATTGCCGATGGACCGCAGGAGCGGCTTGCTGGGAAAGAAGTTATCCAGGTTGAAGACGATGTAATTGCACCATACGCATCTGCTGCTACAGGTGATGTGGTAGCGGTGTACTGCAACCTCAAGAACTATGGGTTTAACTCCAACATGCAAATGACTATGTTCCGTTACTTCGACCATGACACGAATGAGTGGGTGGACAAGGCGATTCTGATTGCGGATGGCAAACTGATTGACCCTAACGGCGTGGTCATTGTCAAGAAGGCAGCAGCATCCTAA

Protein sequences of DBSCAN-SWA_3

>NZ_CP009241|2353246:2373453|2357936_2358179_+|WP_038588601.1|DBSCAN-SWA
MAVPLNELHTHRSRGDAAVSTKNTLPEGNVVKTVWIGESKIEFCDDFVARTPEAIAQVEREFHLAGWNIVKKLRKQGIYI
>NZ_CP009241|2353246:2373453|2372169_2373453_+|WP_038588662.1|capsid|DBSCAN-SWA
MKDFLKKLLKNKEEARSALKDKGLKSNDIVEVRSIGAQVEAIDAEIAELRQQLESMPDDPIAGGATPPEPEQRGAGQLPAGNAAMAQFLKSFNIGGQSQERSEEPADPYGTVEYRNAFMIFAKTGEVKPELRANATTTTADVSAVIPTTILNEIIKKVTVYGQVFSRVRKLNIKGGVEVPILTLKPVATWIGETTVSDKQKAQANTKLTFTYFGLECKVAISLLADTVTLAGFETVITDLIVEAMVQAIDLAVIKGTGTGQPKGITVDTRVPAAQIVSMTPTEFASWESWSKLVLAKMPLAYKAGATFLMASGTFEGYINGMVDDNGQPIGRVNYGIADGPQERLAGKEVIQVEDDVIAPYASAATGDVVAVYCNLKNYGFNSNMQMTMFRYFDHDTNEWVDKAILIADGKLIDPNGVVIVKKAAAS
>NZ_CP009241|2353246:2373453|2364926_2365304_+|WP_038588642.1|DBSCAN-SWA
MAMVWEQGELFPSANKADIVATKMLLRKYPKMAGIVNDLKGRSELTAEEAATLKKWTPIILNIELAIKAITDAEIREIMKYRFVDLHPRKAAVIKWSAFTGRSLDRKILEGTESVAGTLKLLGII
>NZ_CP009241|2353246:2373453|2359922_2360894_+|WP_052091950.1|DBSCAN-SWA
MPADSFPFPMFSGLLTPDHCKKIGSALWLFVWCISSTTAEVEDDGTVWGIVLGGKPMKLSEIGANFGVKDKTVSRWISDLQDHGYLHITRAPRGLIIKVKHSKKGLLKRSDKNVRSSESDQTILSDQSDSDQTYLFVHSEGDQTKMSDHGPELGSDQTKMSDAKDIITTTTITKLEKEWWEEEPNQNPPADDGYLAILDAYCKMHSKFDIHVSTAERHAMGQIVAGGITAPFTIQTMETMYKAKQAKQARDNEPFEQPNSFAYYVKGIEEAWRKSQGGSKSSRKPKTPAAQSEPPRKTKQQQELEDLKRRAKEAKELEESTSY
>NZ_CP009241|2353246:2373453|2360871_2361225_+|WP_038588621.1|DBSCAN-SWA
MKRAQVIDLLIKLKEEYAHQIDTSDPEIDRLYEHLKDFPFDVAVENVRKHIQTNSFPPKISQIRGKVGDLREIEQQKKETAEYLALRDAERTNVVLPPAGWKESLYAKLGINTRTTE
>NZ_CP009241|2353246:2373453|2367235_2367919_+|WP_038588647.1|DBSCAN-SWA
MARHAILQAFYTSEVWRLFRLTLIGERGNGCQRCGRIIAKSVDIIGHHKIELTPENVNDHSISLNPDLVELICYDCHNQEHKRFGYQNRKEVFLVYGPPLSGLLELVRQQMSRGDLIVNMDMLYSALSGLPDYDKPDALFSNVIGVQNFLIDNIKTRLGKWGTAWIVGGFPEKFKRDRLAEETGAELIYCPVSREDCLARLESNEALQYRKDEWRGYIEKWFEQYRE
>NZ_CP009241|2353246:2373453|2370327_2371524_+|WP_052092500.1|portal|DBSCAN-SWA
MLSGYMPVFSRFGNDIYASDVVQNCIDIIATEISKLQPRHIRTDNNGIQTTPRGNLNRLFKFGPNELMTTKDFLEKIVWLLFMNFNVFVYPVYTVQRREDGSESRSFSAMYPLNPYQVDFLQDPVGGLYVKMFFSSGENFTVPYSDVIHIRKRYSMNEIMGGGLNGQPDNEALLKILRINDTVLQGIEKGIKTSMSIRGVLKIATMMDDDTQRKERERFEKLMASGDSGILPIDLKGDFTPVSIDPKMVDKDTMDFLKTSVQEWFGVSLPMLARDYNDEQYQAFYESTLEPILIGLSQAFSKTIFSPRELDMGNEIVFYQRDMMYLSTAAKLELIKTAGEQGLLNDNQKLALLGYPPLPDGNRITQSLNYVDRAIINIYQLNGTKPQPTKAVKEDAEE
>NZ_CP009241|2353246:2373453|2358311_2358827_+|WP_038588606.1|DBSCAN-SWA
MAIGHFPTALQDVMKRQGYTLAQVGRAANIDGSQVGKIVKGTRKASEPVMRAAAEHYDDGQLFLAAAAEVTGGAFTPWLDNVDLHRASVLFKTIEEMQEVLDASKQAAISKTNEQINETERQQIKRLLMETVEAITALSHLAAAICKEYSFSWLGTWKEHRAELKLKNYVK
>NZ_CP009241|2353246:2373453|2371510_2372149_+|WP_052091952.1|head,protease|DBSCAN-SWA
MQKNKLPVMHEPERRAFVMNDLRTDPAGNIMEGHAAVFDQATVIGGWFKEIIERGAFDKTDFKDVIMSVNHDLKRIPLARSRNNNANSTLQLQVDEQGLNTRAELDVENNMEAKALYSAVGRGDISGMSFIFTVRDETWEGLDTELPTRRIKDIGRVIEISAVSFPAYDGTDINARDQQALDSARAALESARSGLDSSLSDLDLAKEKLKFI
>NZ_CP009241|2353246:2373453|2367933_2368119_+|WP_038588650.1|DBSCAN-SWA
MAEVWVQFSRTTEEASESTEYTIREITEEAAINFVNDLIKSNEPIMDTGIFYLDGTPPEKV
>NZ_CP009241|2353246:2373453|2357650_2357920_+|WP_038588597.1|DBSCAN-SWA
MNRYTKLLRKLIHDSNLSLSQISKLLQQKGLKTEKSYLSKLQNGKLSPASDQMNKALAEVLSSDPVELMAAAYREKIPPEVLKRLCTSA
>NZ_CP009241|2353246:2373453|2363181_2363385_+|WP_038588630.1|DBSCAN-SWA
MTFKILKEQKYFLNIGVKRPEGFTGIMTSSEHIAIYKGKREDGTFIFDENGSELLVNPSDIRGISNF
>NZ_CP009241|2353246:2373453|2358836_2359109_+|WP_038588609.1|DBSCAN-SWA
MERTALVAEAVATGKTAPYNLRVIRKQPDKMLPGKVKNAEVYLNTMIRIAKAEMKNDRRSGQSQLRFRLKSLIVSILTLDRAERKGGQAV
>NZ_CP009241|2353246:2373453|2368203_2368533_+|WP_038588652.1|DBSCAN-SWA
MEKSEVYSQELAKLQDIFADVDPSKAQLVEGLLEDAAFLKAENTVLKKALKITGMVKIHPTNPDLQKPVEAARQYLKNVNSYSVIIKTLNSILNKNIIDEEDDDMKEFE
>NZ_CP009241|2353246:2373453|2359105_2359321_+|WP_038588612.1|DBSCAN-SWA
MMDYEFYYRHNLNTFGEYKDAYKNKFEARSMSSRFFVLKVNRIFERTETSDEEKLTEIRAMNDAFNDSFPA
>NZ_CP009241|2353246:2373453|2365657_2366245_+|WP_156130846.1|integrase|DBSCAN-SWA
MLSMNAGGDMKTVQPIRDDRIIEGMKHYFRSRSMRNYLFFCIGIYSGLRVSDLLTITVREARYNYINKVEKKNGHSKRFVVHPSIRSDLDTFIADKADDEYLFASRQRKTISQLKQQPIDRSTAYRFLNEAARKFGLEEFGNHTLRKTWGYRLYQQDERNLALLIDAFGHSDMRVTLRYIGLTQDLLDRATMRMR
>NZ_CP009241|2353246:2373453|2353469_2353736_+|WP_038588588.1|coat|DBSCAN-SWA
MEANPCEPRYYEMLEQLQVLDFALVELNLYLDTHPEDLRAIEQFNQLTQERTRLANQFQELYGPLQNFGRAYSKCPWEWSQSPWPWQV
>NZ_CP009241|2353246:2373453|2353246_2353465_+|WP_038588585.1|coat|DBSCAN-SWA
MNSEERVWTPYRGPFDPCPPVPFKTYVVPPNQFIAFQPPGLPQFPLPEALRAGTLWPALFSPYESKAGKGGI
>NZ_CP009241|2353246:2373453|2362584_2363142_+|WP_038588627.1|DBSCAN-SWA
MKDTKILIPEIPKEWTERIRSGNTNVFRRDEFPEIRLEPPIIGLYAEKFDDAWYWVCGCHKCLGNGKPYSYIICYEHDRCVTCGTHRTELNEIPWGRPDGFQCKPCAEREHEEYKREALEEARERGHSENDCWYTADVLCPVCGSECSDDGMHDSRQHEVTCNVCDTEFIVEVEYEARYTSRLKE
>NZ_CP009241|2353246:2373453|2364089_2364284_+|WP_038588633.1|DBSCAN-SWA
MNKNQIGCVEHALRNQNRFYASADDKDWNDLVNKGYATKHPGWEDSMAYFRVTGSGKKAMSEAD
>NZ_CP009241|2353246:2373453|2354024_2355605_-|WP_038599150.1|DBSCAN-SWA
MNNSYEEYALYLRKSRADIDAEARGEGETLKKHQTALLALAKKMNINVSKEYKEIVSGERVADRPEMQQLLQDVEDGKWAGILVMEIERLARGDTMDQGFVAQAFKYSGTKIITPVKVYDPDNEFDEEYFEFGLFMSRREYKTINRRQQAGRIQSVKDGNYIGNVPPYGYSKIRLEDKSYSLMPHPEQAPIVKMIYDMYTTQNMGMGNIAKKLNLLGVPTAKGSLWTVATISGILQNPVYVGDIVWNRRPVKKSRKDGKLLKTRSEVSEAQWIRVPGKHEAIINKETWELAHRILKGRYHAPAPTGVITSSLAGLVRCSLCGRLMVRRPYSREAEPSLICVTPLCKQVSSLFSLVEERILEGLRIWINQYKAKWDNNMPVETEDTEELLNAKSQIVKDSEKNLSELRKQSSALHDLLERGVYSIDVFMERSQNLSERIADAERGLSVANDDLNLEKNRKEAKDGIIPLAEYVLDTYYSIEDAAERNTLLKSVLQGAVYSKEKRGHWSKPETMRKFDLKLYPKLPEH
>NZ_CP009241|2353246:2373453|2368529_2370239_+|WP_038588655.1|terminase|DBSCAN-SWA
MSAPFASWLHEYMSLCRSGEILVGQELLQTFDILDEHLRDPNIRFEPEDGNKRIKFIEEKCRHFEAPYAGKPFKLVLFQKAFITALHAFKIFEEEIQRWVRLFQDVLFVVGRKNGKTPLIGAMNLAEFFCGPEGIKILCSSNDYEQASLMFDAINAMREESPSLEKVTRKNLTGIYFGNPKRRKKNSKFSYRNKGHIKKISAKTGAKEGRNIAVGAADEVHEMKDNSGVMPIRQSLSTQDEPLYYELTTEGFTNDGYLDGRMVEARQVLSRELHRPRWLVWMYTQDSEQEVWQDERTWVKSNPGLGTIKKWSFLRGMMEESKTNKATRIFVLAKDFNIKQNNAAAWLTMDDIVNSKDQTFDLEEMRGRVAIGGVDLSKSGDLACARALFLKDGKKFTVSQYFIPESKLSNLSKEDLEKYKEWIRQDRITVSPGNENDFRLVSAWFVKLVKDYGIRFLKIGYDKWSAVYWVKEMEEYGFDMVRVAQDWAPMSEPMKLVEADLKSDLIHYNNDGLDRWCLENTAITVNSKMEQMPIKVQGKEDRKIDGAVTLIVSYRVYIDNRSDFLRLCA
>NZ_CP009241|2353246:2373453|2355792_2356131_+|WP_038588592.1|DBSCAN-SWA
MEIIGVKIEGRTGEEADFVIFPIHSVNYISMFSIGKSAEPLPAFHTTNGSYVPIVTLRDLSVALKQFGFTYYDKSTLVNKNRIKGRKRDKGVLIVTFVDNSEIAVAGRSRYR
>NZ_CP009241|2353246:2373453|2359399_2359702_+|WP_038588615.1|DBSCAN-SWA
MIPDHLLQDRYWRGLIYIFTKHAKLSHFLTPEFVDFEELSVHVDKLKKVSKGWSTSEKFMLAVALHLFNGRNKFDMSEADRLDDRNTEILIHALRLRYAM
>NZ_CP009241|2353246:2373453|2363616_2363835_+|WP_038599159.1|DBSCAN-SWA
MVRREGLYNKYQVFNRKSGQEAEGQYFVLKPESDYAARVALMAYAEAADNPQLTMDITVWLTGLPPLGSKSK
>NZ_CP009241|2353246:2373453|2361187_2362540_+|WP_038588624.1|DBSCAN-SWA
MQSSELIRELPNSPAAEATVLGAILIDKTGDAAEIASSLQPDTFFNPAHQQIFKAILELHREDDPIELPALVNELNRMKQLEKIGGVSYLAKLAHAVPTAANIGYYIGVLEDKHTLRKAIYAAERQMKQAYESDDAGLVVNSMLNEAAALSDQASSDDDFQPIKKVLFKVIESTEERCENVKNGITTGLYTGYTDLDGMLAGLHKGDLIIVAARPSVGKTAFALNIAQNVAVKTKETVAVFSLEMSAPQLVQRMVSAEVNLDANAMRTGEMKAHDWDKMAGAASILGEANIFIADPGVITVQEIRTRCRRLKKSQGLGLIVIDYLQLIQGRGKSGDNRQQEVSEISRTLKQIARELDVPVIALSQLSRGVEQRQDKRPMMSDLRESGAIEQDADVVAFLYRDDYYNADSEKKNIIEIIISKQRNGPVGTVELVFLKQFNKFVNYERSHAS
>NZ_CP009241|2353246:2373453|2356757_2357465_-|WP_052091949.1|DBSCAN-SWA
MKYSELLSKYIEESGLSLGEIAIRLSNKNIKIDRSYISKLKNGNKPPASEDVTRALAEVTGGDTDALLLAGHIEKAPEEIKEGLIEYNASHRMLKNESLQFHCLSALDAIRDFKNRFLTTEVIEEDLLNNMLSTLSYFTDIEIDEDLIRSNPFGASEFLSNRITKRLEEFYAANTNYSARVDLNAYNNISDIKEKKQQYEDDETSKNRKDLIEMIKQASEEDLPDLKILVKRFIK
>NZ_CP009241|2353246:2373453|2364314_2364617_+|WP_038588636.1|DBSCAN-SWA
MSTLSPIHPQAVQMINKALADVIRRGRKFERMKLYVCPRSELAQRSTIKTAFGDLRICTSEYLSKGYSYIREDLIAEEIGFAWVSYPKTANITDNRRKEA
>NZ_CP009241|2353246:2373453|2364619_2364829_+|WP_038588639.1|DBSCAN-SWA
MIIKTVKNVNSPAGCIVSGVSFRAQRERGGYSITFGEFRGQYIPESSAIILSDVVLNEDGKIPRGQKYA
>NZ_CP009241|2353246:2373453|2366486_2367236_+|WP_038588645.1|DBSCAN-SWA
MSRGRSENRDKAFRMWEKSGRTLPLVEIAKRLGIASSLVRKWKHEDAWEARPSRKRGGQPGNTNAVGNKGGAAPPGNSNAWKNGNYESMWMSQIAAEHKLQLMKMETDPREILLNEVRLLEFREYMLMKNMKDIEAGEDRLSIERKYQFYEEDDVEAGGAEMLRFVNDVPEFQPVKVVKKQIVEEKTKEPQKMERILQIHGALTAVQGRKLRCIALLDQFDRNELTTDELRLKVERMQLEVNKLRSEAW

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2352951:2352964	attL	NA	NA	NA	NA
WP_038588585.1|2353246_2353465_+|coat	spore coat associated protein CotJA	NA	NA	NA	NA
WP_038588588.1|2353469_2353736_+|coat	spore coat protein CotJB	NA	NA	NA	NA
WP_038599150.1|2354024_2355605_-	recombinase family protein	R9W007	Paenibacillus_phage	3.6e-143	50.7
WP_038588592.1|2355792_2356131_+	hypothetical protein	NA	NA	NA	NA
WP_052091949.1|2356757_2357465_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_038588597.1|2357650_2357920_+	transcriptional regulator	NA	NA	NA	NA
WP_038588601.1|2357936_2358179_+	hypothetical protein	NA	NA	NA	NA
WP_038588606.1|2358311_2358827_+	helix-turn-helix transcriptional regulator	A0A290FZK9	Caldibacillus_phage	7.1e-08	24.8
WP_038588609.1|2358836_2359109_+	hypothetical protein	NA	NA	NA	NA
WP_038588612.1|2359105_2359321_+	hypothetical protein	NA	NA	NA	NA
WP_038588615.1|2359399_2359702_+	hypothetical protein	NA	NA	NA	NA
WP_052091950.1|2359922_2360894_+	hypothetical protein	NA	NA	NA	NA
WP_038588621.1|2360871_2361225_+	hypothetical protein	NA	NA	NA	NA
WP_038588624.1|2361187_2362540_+	replicative DNA helicase	A0A1P8VVQ6	Streptococcus_phage	1.5e-97	47.5
WP_038588627.1|2362584_2363142_+	hypothetical protein	NA	NA	NA	NA
WP_038588630.1|2363181_2363385_+	hypothetical protein	NA	NA	NA	NA
WP_038599159.1|2363616_2363835_+	hypothetical protein	NA	NA	NA	NA
WP_038588633.1|2364089_2364284_+	hypothetical protein	R9TMG2	Paenibacillus_phage	8.2e-10	50.8
WP_038588636.1|2364314_2364617_+	hypothetical protein	NA	NA	NA	NA
WP_038588639.1|2364619_2364829_+	hypothetical protein	NA	NA	NA	NA
WP_038588642.1|2364926_2365304_+	hypothetical protein	NA	NA	NA	NA
WP_156130846.1|2365657_2366245_+|integrase	tyrosine-type recombinase/integrase	Q7Y4J2	Streptococcus_phage	6.1e-32	39.6
WP_038588645.1|2366486_2367236_+	hypothetical protein	A0A0A8WES6	Clostridium_phage	1.0e-07	43.4
2366935:2366948	attR	NA	NA	NA	NA
WP_038588647.1|2367235_2367919_+	HNH endonuclease	Q09YG6	Lactococcus_phage	6.7e-06	48.2
WP_038588650.1|2367933_2368119_+	hypothetical protein	NA	NA	NA	NA
WP_038588652.1|2368203_2368533_+	hypothetical protein	A0A290GJQ7	Caldibacillus_phage	6.5e-07	31.2
WP_038588655.1|2368529_2370239_+|terminase	terminase	A0A0A8WIA5	Clostridium_phage	6.9e-76	33.0
WP_052092500.1|2370327_2371524_+|portal	phage portal protein	A0A1L2BY94	Clostridium_phage	1.2e-37	27.9
WP_052091952.1|2371510_2372149_+|head,protease	HK97 family phage prohead protease	A0A0F7L115	uncultured_marine_virus	2.5e-23	39.2
WP_038588662.1|2372169_2373453_+|capsid	phage major capsid protein	R9TQG7	Paenibacillus_phage	1.1e-06	23.1

Sequences of DBSCAN-SWA_4

Nucleotide sequences of DBSCAN-SWA_4

>NZ_CP009241|2519674:2530049|DBSCAN-SWA
GATGAAACCGTTTCGTATCCGGCTTACTTTTATACTGATGACTATGATCGGGATTTCCATGATCGGCGCCGGACTTACCATGGCCCAATTGTTTAAGGACTCCCATATTGCGGCCCTGGAGGAAAACATGTCCCGGGAAATAAAGCTGCTCTCCGGAACACTTCAGTTTGCCGATATGAACAGCTCCGGCGCATTGAATTTCTATACGGAGCAGGCCAAGCATATCTCTAAGCTGACCAATTCCCGGATCACCTTCATTACCAAGGACGGCAAGGTCATCGGCGATTCGGAGAAGGATCCGCTGCAAATGGACAATCACTCCACCCGTGAGGAGGAAGTGCTGGCCGCCAAGGAAGGAATCGGACGGGCGATCCGTTACAGTGATACCCTCGACCGGCAAATGCTGTATGTAGCCGGAGCTGTAGTCTCGGATCAGGGGTTCGACGGTTATATCCGGCTCTCCATGGAGCTAAACGCGGTGACGGAAGGACTCAGCCGGGCTTGGCTGATTATGGCCGGGGGGCTGGTTCTGCTGTTTATTGCGGCAACCCTGGTGAGCTACAAGGTGGCTTCAAGTATGACCTCTCCGCTGGAGCAGATTACGCGAGTGGCCCGGCGTATAACCGACCTGGATTATGATGCCCGAGTGCCGATGAAGCGCAAGGATGAGATCGGTCAGCTTGCTACAGCAATCAATGCCATGGCCGACAGCCTGCAGACCCAGCTGAAGACGATCCGTGATAACGAGGATTTGCTGCAGAGCGTGCTGGACAATATGACCGGCGGTATTGTGATGATCAATGCGGAGGGCGAGATTGCGCTGCTGAACCGGGCATCGGAACGTCTGCTGGACGTGAAGAACAGTGAAATGGCCGGCTATTCCTACAAGGAAATTAAGCATCATTATGAGCTTACCCGATTGATTGACGAGGGAGTTACCCGTAAGGAGGCAATCCACGAGGAACGGAGCATTTATAACCCGGCCGAGCGGATCGTCCGGCTTGACGGTGTGCCGATGATGCAGGATGGCTCTTACCGGGGCATGCTGTTCCTGCTGCAGGAGGTGACGGAAATCCGCCGTCTGGAGAAAATGCGCAGTGAGTTTGTGGCCAACGTCTCACATGAGCTGAAGACACCGGTGGCTGCGGTAAAAGGGTTTGCCGAGACCCTGCTTGGAGGCGGCGTTACGGATGAGAAGACGGCACGTTCTTTCCTGCAGATTATTTATGATGAGAATGAACGGTTGAACCGGTTAATCGGAGATATTCTGGAATTGTCCAAAATCGAATCAAAGCGCGTGCAGCTCGAATGCTCTCCTGTCCATTTAATTGAATTTTTTGATTCCGTACTGGGGACGCTCAGTAAAGTGGCAGAAAAGAAAAAAATCAGCCTCAGTGCAAATGTGCCGAACGAGCTGTTCGTGGAGGGTGATGAAGACAAGCTGCGCCAGATCTTTATGAATCTGCTCTCCAATGCAATCAATTACACGCATGATGGGGGAAGTGTGAAAGTAACCGTCGTCAACGGCCATAAGGCGGACGGCACGGAAACGGTTGTCTTTACCGTCAGCGATACCGGCATGGGCATTCCCCGCAAGGATTTGCCGCGGATTTTTGAACGCTTTTACCGGGTGGATAAGGCAAGATCGAGAAGCTCCGGCGGAACCGGCCTCGGATTGTCAATCGTGAAGCATCTGGTGGAGCTGCATCGCGGTTCGATTACGGTGGAGAGTGATCTCGGCATCGGCAGCTCGTTTATTCTGGAATTGCCGCTGTTGCAGGAGCAGGCAGAATAGGATGAAGCCCCGTTTACAGCTGGACACGCTCCCGGCAGTGCGTTTTCAAATTTGCCAGTGGGCCCTTCAAGGTTTACTATGGAATTGAATTCTTTTTAAAAATTCAGAAGTCATTGAGATTTTACACCGAGTTAACATTCCGGTGATATGATGGGCTTGCGAACTGATTTGTAAATTTAAAAACATATGAAGACGGGGGAACCTATGGCACAACGATTGCTTGTCATTGAAGACGAACCGACGCTGGCACGGCTGCTGTCCTATAATTTGACGCAGGAAGGTTATGAAGTGACGGTAGAGGATCATGGAACGGCAGGATATGACCGTGCGACTAGAGAACCTTTTGACCTGATCGTACTGGACCTCATGCTTCCGGGAATGAACGGGATTGATATTCTTGATAAACTACGCGGACAAGGCATCCGTACGCCTGTTATCGTGCTGACTGCCAAAAATGCCGAAGAGGATGTAGTTCGCGGCCTGAAATCCGGTGCTGATGATTATATAACCAAACCTTTTGGTGTATCGGAATTGCTTGCCCGGGTCAGCGCAGTACTCCGGCGGATCTCCGGACTTGCCGAAGAAGTCCAGCCGGAAGCTGTAGTATCGGCATCGACGATTATTCTGGGACAGCTGGAAATTTACCCTGAACGGTATGAGGTTTCTCTGGGCGGAGTCAGCATTAATCTGCGGCCGAAGGAATTTGAAGTGCTGCTGTATCTGGCGCGCAAGCCGGGTGTGGTGCTGACGCGCGACGATTTGATGAATGCCGTATGGGGCTTTGATTATATCGGCGGACAGCGGACGGTGGATGTCCACGTCAGCTCACTGCGCAAGAAACTGGAGCTTGATCCGGAATCAGTCCATATTGATTCGATTCGCGGTGTAGGTTACAAACTGGTAGTTAGCAAGAAAAGAGCGCCTGTCATTTGAAATGACGGTGTTCTTTTTTTAAAATATACAAAGAAATGAAATAATAAGATCATCGGCATTTCGTGAAAACGGGACGATTGTTACCGATTTTACACTGCGTTAACAATTCTCTTCAACTCTATTTACACTGAAAGCTTATCATGGGGAACGAAGATGATGAGAAGGAGACGCAAAAACTAATGAAATCCATCATTGACATAGAGAAACTTGATCTCTACTATGAGTCTTTTCATGCACTGAAGGCTGTGGATCTGCAGATTCCGGAGAAACAGGTGACAGCTTTTATCGGTCCCTCCGGCTGTGGTAAATCCACATTACTGCGCACACTAAACCGTATGAACGACATGATTCCCGGAACACGTATTGAAGGTAAAGTGAACATCAGCGGCAAAAATATTTACAGCGACGAGGTTGAGGTGGAGAGCCTGCGCAAGCAGGTCGGCATGGTATTCCAGCAGCCCAATCCATTTCCCAAGTCGATCTACGACAACGTGGCCTACGGCCCCCGTCTGCATGGCGTCCGCGCCAAAGCGGAGCTGGATGAACTCGTAGAACAAAGTCTGCGGCAATCCGCGCTTTGGGAGGAAGTTAAGGATTTTCTGAAAAAATCTGCACTTAGCCTGTCCGGTGGACAGCAGCAGCGTCTTTGCATTGCCAGAGCGCTTGCGGTACAACCGGATATTCTGCTGATGGATGAGGCAACCTCCGCGCTTGACCCGGTATCCACACTAAAGATTGAGGAACTGGTACAGGAGCTGCGCGATAAGTACACCATTGTTATGGTCACACATAATATGCATCAGGCGGCCCGGGTATCGGGCAAAACCGTGTTTTTCCTGAACGGTGTAATTGTAGAGGCTGCGGATACGGAACTGTTGTTCTCCAATCCAAAGGACTCCCGCACAGAAGACTATATATCCGGCCGCTTCGGCTAACCCCCGCAGGGACCCGTTACTGGAAATGACAAGCTGACCATACGTTTTTGAGGAGGATCGCTTTTATTATGATTCGCAGAAAAGAATTCGATAAAGATCTGGAAGAACTACGCAGCCTGCTGCAGCAGATGGGCGAGCATGTAACGGATGCTCTGGAAGGTGCAATCGTAGCTTTGCAGACTCTTGACACCGTACGTGCACAAGAAATCGTCAAAGCCGATTTACGGCTGAATGCCATGGAAGACAGAATAATGGAAATCGGTTCGCGGCTGATTATCACCCAGCAGCCCGTAGCCAAGGACCTGCGCCGAATTATTGTTGCGTTCAAAATATCCAGCGATCTGGAGCGTATGGGCGATTTGGCACTGGATGTTGCGAAGGTTACGCTGCGCATTCAGGGCCAGCAATTGATCAAACCGCTGGTGGATATTCCGCGGATGGCTGAAATTGTGGCCGTCATGATCGACGAGGCGATTCAATCCTATCTGGATGAGAACACCGATCTGGCGTACAAGATGGCCGAGGATGACGACCAGGTCGATCATTTGTACAGTGCAACGATTAATGAACTGTACACTTATATGGTCGAAAAGCCGGAATCGCTGAATCAGGCGATGCTGTTGACGCTGGTTGGCCGCTATATCGAGCGGATTGCCGATCACGCGACCAACATCGGCGAAAGTGTGGTTTATCTCGTAACAGGCAAACGCCCGGATCTGAATCAATAACGAAGGCACGATTGAGCCGGTGCTGGCTGACCTTGTGCAGCAGCCCCGGATGAATTTCGCGTGTACCTACTAAGCAGCAAACTCCTGTACTGGAGGCTTGCTGCTTTTTTTCATTTTTATTTGGAAGTTAAGAGGTTTTTGCAAGGGTAATAATGGAAATCCTACATTAAATACATAAACTTCGGGCGCTTTCTCTATTTAGCGGGCGGGAACTTGCTTTACCGGTAGAATCCGCAGTTCATTTCGGATGTCTTGGTTCTTTTTTGAGCGGGGCATATGTTACTATGTAGGGAGTAAGCAAGATAAAGGCGAGGTGCTATAGTGGACAAGTTGATACTAATCGATGGAAATAACATCATTTATCGCGCATTTTTCGCCATGCCGCCGCTGACGAATACGGCGGGGCAGCAGACAAATGCGGTATACGGATTTACGACGATGCTGCTGCGTTTAATAGAGGAGCATAAGCCGAGTCATCTGATCGTAGCATTCGATGCCGGGAAGATTACATTCCGGCATGAAGGGTATGAAGATTATAAGGGCGGCCGTCAAAAGACACCGCCAGAGCTCTCCGAGCAGTTTCCGATGCTGAAGGACCTGCTGCGTGATATGGGGGTGCCGCAGTTTGAGATTTCCGGTTACGAAGCTGACGATATTATCGGCAGCATCTCGCGTGAGGCTGATGAAGCCGGACGCCAGGTAATGATCGTGTCCGGGGACAAGGACATGCTGCAGCTGGCCTCGGAGTATACGACGGTGGCACTGGTCCGTAAGGGCGTTACAGAAGTCGAGCTGTACGGACCGCAGCAAATCCGCGAGAAATACGATCTGACGCCAGAGCAGATCATCGACCTTAAGGGGCTGATGGGTGATGCCAGTGATAACATTCCCGGAGTGCCTGGCGTAGGCGAGAAGACCGCACTTAAGCTGCTGCACCAGTTCGGTTCGGTCGAAGGCGTGCTGGCCGGAACCGGCGAGCTGAAGGGCAAGATGAAAGAGAAGCTGGAGGAACATGCGGACAGTGCCGTGATGAGCAAGAAGCTGGCGACGATTTACCGCGAGGTTCCGCTGGAACATGCCTGGGAGGATATGGAATTCACCGGAATTAAGGGGGATACCGCCGGCCCGGCACTCGCCAAGCTGGAATTCAAATCCCTGCTTGAGCGCCTGTCGCTGAGCGCTTATTCGCCCAGCAGTGATGGAGCTGTAGAAGCGGTTGAAGCTGCCGTCCTGGATATTACCATCGTCGGTGAAAGTGAGCTGGAGGACTTGATCTCCGCTCTCCCGGGCATTTCCGCGCTGCATGTGGAATCAAACGGTGAGAACCCGCACCGTGCAGAAGTGATTGGCCTTGGCTTGTCTTCGCCGGAGCGGCATTACTTCGTGCCGTTTGCACTGCTGCAGAGCCATGCTGCTGCTCCGCTGCGGGCCTGGCTGGGAGACAGCAAGGCGCCGAAGAGCGGTTATGATCTGCACCGCGCCGATCTGGCGCTGCATTGGCAGGGGATTCCTTTTGCCGGAGCAGCCAATGATGTGCAGCTTGCTGCTTATCTGCTGGATCCGACAGAAGCAAATCAGAACTTGAATGATCTTACCGCCAAATATGGCCTGCCCCGCTTATCTCCGGATGAAGAGGTGTTCGGCAAAGGCGCCAAATATAAAATACCGGAGCTTGAAATCCTCGGCAATCATGTGGCGCGCAAAAGCGCTACCGTGCTTGGTATCGTCGAGAAGCAGCAGCAGGAGCTGACCGAGACGGCAATGACCGGACTGTTCGAAGATCTCGAAATGCCGCTGTCGCGCATTCTTGCCGATATGGAAAAACAGGGGATTGCCGTCAATAAAGAAGATCTTAAAGAGCTGGGGAAAGAATTCGAAGCCCAGATTTCCAAGCTGGTTGCTGAAATCTACGAGATATGCGGAACCGAGTTCAACCTGAATTCGCCTAAGCAGCTCGGGGAAATCCTGTTTGTGAAGCTGGGTCTGCCTGTCGTCAAGAAGACCAAAACAGGCTATTCCACCGATGCCGAGGTGCTGGAGAAACTGGCCCCTTATCATGATGTGGTGCGTCTGATCCTGCAATACCGCTCGATCGCCAAGCTCCAGTCCACCTATGTAGAGGGGCTGCTCAAGGAAGTCTCCGAGGTGACCGGTAAGGTGCATACCTTCTACCGGCAGACCATTGCCGCAACAGGAAGGCTTAGCAGCCAATTTCCGAACCTGCAGAACATTCCGATCCGGCTGGAGGAAGGCCGCAAGATCCGCAAGGTCTTTGTACCGTCCGAACCGGGCTGGTCAATTCTGGCGGCAGATTACTCGCAGATCGAACTCCGCGTGCTGGCACATATTTCCGGTGATGAGCGGATGAAGGAAGCTTTTCTGCATGATATGGATATTCATACCAAGACAGCGATGGATGTGTTCGGAGTCACGGCCGACCAGGTCGACAGCAACATGCGCCGGTCCGCCAAGGCGGTTAACTTCGGCATTGTGTACGGCATCAGTGATTACGGACTGTCGCAGAACCTGGGGATTTCCCGCAAGGAAGCATCACATTTTATTGAGCAGTACTTTGAAGTATATGAGGGTGTACGCCGCTACATGGACGATATCGTGCTTGATGCCCGCAAGCAAGGTTATGTAACCACGCTGCTGGAACGCCGCCGCTATCTGCCGGAGATCAATGCGAAGAACTTTAATCTGCGCTCATTTGCCGAACGTACGGCGATGAATACCCCAATTCAAGGGACGGCTGCAGACATTATCAAGCTGGCTATGGTCCATATGGACAAGGCGCTGTATGAGCGCGGGCTGAAGAGCCGCATGCTGCTGCAGGTGCACGATGAGCTTGTTTTCGAGGTGCCGGAAGATGAGCTTGAGCTGATGAAGGAACTGCTGCCCAAGGTTATGGCCGGCGCGCTCAAGCTCTCTGTGCCGCTGAAGGCAGAGGTAAGTTATGGAAGTAACTGGTATGAGGCGAAATAGACTCCCCGCAGGCCCGGCAATTCCGGTATAATGGAGGAGAGGTGAGCCATTATGCCGGAATTGCCGGAAGTAGAAACAGTCAAGAGAACACTTAATGAATTAATTAAAGGCAAGCAGATAGAGAATGTCACCGTCCGGCTGCCGCGGATTATCCAGCGTCCGGACGATACTCAGGCTTTTGCCCATATGCTGGCAGGCCATAGCGTGGTTCATGTGGAGCGCAGAGGCAAATTTCTGCGTTTTGTATTTGACGGTTTGGTAATGGTCTCCCATCTGCGGATGGAGGGCCGGTACGGTCTTTTCCAGGGAGATGAGCCGCTGGACAAGCATACGCATGTCATCTTCCATTTCACCGACGGCACCGAGCTGCGGTATACGGATGTGCGTCAGTTTGGTACCATGCATTTGTTCCAGCCGGGCGAGGATCTTCTCCTTAAGCCGCTGAGCAAGCTGGGGCAGGAACCGCTTGATCCTTCCTTTACAGTGGAGAGATTCAAGGAAATTGTCTCCGGTAAAAACACCAAAATCAAACCGCTGCTGCTGAATCAGGAATATGTGGTCGGCATCGGCAATATTTATGTAGATGAGGCGTTGCATCGCGCCGGAATTCACCCTGAGGTGAGCGCGAAGGCGCTTACGGAAGAGCAGTTGAACAAGCTGCATCATGCGATTGTGGCAACGCTGACTGAGGCGGTGAATGCCGGAGGCTCCTCTGTGAAGTCGTATGTCAACGGCCAGGGAGAAAGCGGCAGCTACCAGCAGCAATTGCTCATTTACGGACGTAAGGATCAGCCCTGCGCCACCTGCGGTACTCTCATCGAGAAGAGTGTTGTAGGCGGCCGGGGCACTCATATTTGCCCAAGCTGCCAGCCTTTGGCTGCGGCAGTTAAGTAGGGCATCGCACTAGAGCAAGAGATGATTTACAGGCATTATACACCTCTGCTGTTCATGCTGCTGCAAAAGTAAGGCACCGACAGTTTGTCCCGCCCATATACTGTGTGAAGAATGCTCAATAAAGCGAACGGAGCCCGCGGAACGTTCCGCACGGGCTGCCGGTTCTTCACGGGAGGGATTGCGGGTGCTCAGCCCCTTGTTTTCATTGCTGCTGCTGGCTTTTGCCCTGAGCTTGGACGGTTTTGGTGTAGGCATTACATATGGACTCCGCAAAATGAAAATACCGCTGCTCTCCATTATGATTATCTCGCTTTGCTCGGGGATAGTCATTTGTGTCTCTATGCAGGTAGGTGTGCTGCTGGCGAAGGTAATTTCACCGCAGGCCGCTTCAAGCATCGGCGCGATTATTCTGGTCCTGATGGGCTGCTGGTCCCTCGTCCAGATGCTGATTCAGAAGGAGAAGGAGCACAGTCCGGGAGGACGGGAGACAGGAACCGTACTGCTTTCGGGAGTGGCTTCCAAGGGGGAGGCTGCAACTGCTGACCTTGCAGATACGACTGCGGTTTCTGTGAGTGAGATCGAAAAAGACGCGCAGAAGGCGGCAGTCTTTTCACTGGAGCTCCGCCATCTCGGGGTGGTCATCCAGATTCTCCGTACGCCGTCTTCGGCCGATATGGACGCCTCCGGGAGCATTTCCTCCATGGAAGCGATGCTGCTCGGAATAGCACTGTCGCTGGATGCTTTCGGAGCGGGTCTTGGGGCTGCACTGCTGGGATTCAGTCCGGTATCCACCTCGCTTATGATCGCCCTGTTCAGCGGAACCTTTCTGCTGCTGGGCATGAGAACAGGTCTTAAGCTGTCTGGACGTTACTGGATGAAGCATGCTGCCGTACTGCCTGCGTTAATGTTAATTGCAATGGGAATAATGAAGCTATTATGAGGTGAGTACATGATTATGGGCTTAACCGGAGGCATTGCTTCTGGAAAAAGCACCGTGTCCGCACTGTTTGTGGAAAAGGGAGCAAGACTCGTGGACGCTGATGCCATCGCCAGAGAAGTCATGCTCCCGGGACATCCGGTGCTGGCTGCAGCTGTGCTGCATTTTGGAGAAGGAATCCTGCTGCCGGATGGAACACTGAACCGCACCAAGCTGGGGGAGATCGTTTTTCATGATCCGGAAGCCCGGCAGGCGCTGAATCAGTTGACGCATCCGGCGATTCGCCAGGAAATCAAAGACCGTATGAACACAATGGAACAAGAAGACCCGCAGCGGTTGACTATTGTAGATATCCCTCTGCTGTATGAATCGGAGCTGGACAACCTTTTCGGGCAAATTGTGGTCGTCTATGTTCCCCGGGAGGTCCAGTTGGACCGGCTGATGGAGCGCAACAGGCTGACTCTGGAGCAGGCCCAAGGAAGACTGGATGCCCAGTTGGATATTGAACTGAAGCGCAGCAGAGCGGACTACATCATCGACAACAGCGGTACTCTTGCCCAAACTGAGCAGCAGGTTGCCGTATTGTGGGACAGGCTGGGCCTATGATGAAATGGCTGCGTAAAAAAAGAGTGCTGCTCCTGTTATTCGTTGGATTCACTGGAATCCTGTTCTTGAGTACCAACTGGATGTCCTGGTTTTATCCGATTTATTATAAAGCAGAAATTCGTGAGCACAGTATTACCTACGATATGGACCCGTTCCTTGTGGCAGCCATCATCCGGGTGGAAACGAACTATAAGACCGGCCGGGAGTCCAAAAAAGGCGCATTGGGACTCATGCAGCTGATGCCGGATACGGCGAAGTGGGCGCTTGAAAAGGCCAAGCTTCCCGATGTCTCACTGCAACAATTGAAGAGGGAGCCATCGGCCAACATTGAGCTTGGAACCTGGTATTTGTCATCGCTTTCCCGCCAGTTTGATGGCAACCGTACCGCTGTAATCGCGGCCTATAACGCAGGCCCCGGGAAAGTGAAGAGCTGGCTGGAAAAGGGCAATTGGGACGGTACAGCGGCTTCCGTGAAGGATATCCCGTTTGGCGAGACCCGGCATTATGTGCAGCGAGTCATTTATTATTACGACCAGTACACGGAGATTTACAGCGAGTTCTAA

Protein sequences of DBSCAN-SWA_4

>NZ_CP009241|2519674:2530049|2523404_2524064_+|WP_038588969.1|DBSCAN-SWA
MIRRKEFDKDLEELRSLLQQMGEHVTDALEGAIVALQTLDTVRAQEIVKADLRLNAMEDRIMEIGSRLIITQQPVAKDLRRIIVAFKISSDLERMGDLALDVAKVTLRIQGQQLIKPLVDIPRMAEIVAVMIDEAIQSYLDENTDLAYKMAEDDDQVDHLYSATINELYTYMVEKPESLNQAMLLTLVGRYIERIADHATNIGESVVYLVTGKRPDLNQ
>NZ_CP009241|2519674:2530049|2521672_2522401_+|WP_038588964.1|DBSCAN-SWA
MAQRLLVIEDEPTLARLLSYNLTQEGYEVTVEDHGTAGYDRATREPFDLIVLDLMLPGMNGIDILDKLRGQGIRTPVIVLTAKNAEEDVVRGLKSGADDYITKPFGVSELLARVSAVLRRISGLAEEVQPEAVVSASTIILGQLEIYPERYEVSLGGVSINLRPKEFEVLLYLARKPGVVLTRDDLMNAVWGFDYIGGQRTVDVHVSSLRKKLELDPESVHIDSIRGVGYKLVVSKKRAPVI
>NZ_CP009241|2519674:2530049|2519674_2521468_+|WP_038588962.1|DBSCAN-SWA
MKPFRIRLTFILMTMIGISMIGAGLTMAQLFKDSHIAALEENMSREIKLLSGTLQFADMNSSGALNFYTEQAKHISKLTNSRITFITKDGKVIGDSEKDPLQMDNHSTREEEVLAAKEGIGRAIRYSDTLDRQMLYVAGAVVSDQGFDGYIRLSMELNAVTEGLSRAWLIMAGGLVLLFIAATLVSYKVASSMTSPLEQITRVARRITDLDYDARVPMKRKDEIGQLATAINAMADSLQTQLKTIRDNEDLLQSVLDNMTGGIVMINAEGEIALLNRASERLLDVKNSEMAGYSYKEIKHHYELTRLIDEGVTRKEAIHEERSIYNPAERIVRLDGVPMMQDGSYRGMLFLLQEVTEIRRLEKMRSEFVANVSHELKTPVAAVKGFAETLLGGGVTDEKTARSFLQIIYDENERLNRLIGDILELSKIESKRVQLECSPVHLIEFFDSVLGTLSKVAEKKKISLSANVPNELFVEGDEDKLRQIFMNLLSNAINYTHDGGSVKVTVVNGHKADGTETVVFTVSDTGMGIPRKDLPRIFERFYRVDKARSRSSGGTGLGLSIVKHLVELHRGSITVESDLGIGSSFILELPLLQEQAE
>NZ_CP009241|2519674:2530049|2524385_2527049_+|WP_038588972.1|DBSCAN-SWA
MDKLILIDGNNIIYRAFFAMPPLTNTAGQQTNAVYGFTTMLLRLIEEHKPSHLIVAFDAGKITFRHEGYEDYKGGRQKTPPELSEQFPMLKDLLRDMGVPQFEISGYEADDIIGSISREADEAGRQVMIVSGDKDMLQLASEYTTVALVRKGVTEVELYGPQQIREKYDLTPEQIIDLKGLMGDASDNIPGVPGVGEKTALKLLHQFGSVEGVLAGTGELKGKMKEKLEEHADSAVMSKKLATIYREVPLEHAWEDMEFTGIKGDTAGPALAKLEFKSLLERLSLSAYSPSSDGAVEAVEAAVLDITIVGESELEDLISALPGISALHVESNGENPHRAEVIGLGLSSPERHYFVPFALLQSHAAAPLRAWLGDSKAPKSGYDLHRADLALHWQGIPFAGAANDVQLAAYLLDPTEANQNLNDLTAKYGLPRLSPDEEVFGKGAKYKIPELEILGNHVARKSATVLGIVEKQQQELTETAMTGLFEDLEMPLSRILADMEKQGIAVNKEDLKELGKEFEAQISKLVAEIYEICGTEFNLNSPKQLGEILFVKLGLPVVKKTKTGYSTDAEVLEKLAPYHDVVRLILQYRSIAKLQSTYVEGLLKEVSEVTGKVHTFYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPGWSILAADYSQIELRVLAHISGDERMKEAFLHDMDIHTKTAMDVFGVTADQVDSNMRRSAKAVNFGIVYGISDYGLSQNLGISRKEASHFIEQYFEVYEGVRRYMDDIVLDARKQGYVTTLLERRRYLPEINAKNFNLRSFAERTAMNTPIQGTAADIIKLAMVHMDKALYERGLKSRMLLQVHDELVFEVPEDELELMKELLPKVMAGALKLSVPLKAEVSYGSNWYEAK
>NZ_CP009241|2519674:2530049|2522541_2523336_+|WP_076110646.1|DBSCAN-SWA
MGNEDDEKETQKLMKSIIDIEKLDLYYESFHALKAVDLQIPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEGKVNISGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGVRAKAELDELVEQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPVSTLKIEELVQELRDKYTIVMVTHNMHQAARVSGKTVFFLNGVIVEAADTELLFSNPKDSRTEDYISGRFG
>NZ_CP009241|2519674:2530049|2527100_2527943_+|WP_038588975.1|DBSCAN-SWA
MPELPEVETVKRTLNELIKGKQIENVTVRLPRIIQRPDDTQAFAHMLAGHSVVHVERRGKFLRFVFDGLVMVSHLRMEGRYGLFQGDEPLDKHTHVIFHFTDGTELRYTDVRQFGTMHLFQPGEDLLLKPLSKLGQEPLDPSFTVERFKEIVSGKNTKIKPLLLNQEYVVGIGNIYVDEALHRAGIHPEVSAKALTEEQLNKLHHAIVATLTEAVNAGGSSVKSYVNGQGESGSYQQQLLIYGRKDQPCATCGTLIEKSVVGGRGTHICPSCQPLAAAVK
>NZ_CP009241|2519674:2530049|2528892_2529486_+|WP_038588980.1|DBSCAN-SWA
MIMGLTGGIASGKSTVSALFVEKGARLVDADAIAREVMLPGHPVLAAAVLHFGEGILLPDGTLNRTKLGEIVFHDPEARQALNQLTHPAIRQEIKDRMNTMEQEDPQRLTIVDIPLLYESELDNLFGQIVVVYVPREVQLDRLMERNRLTLEQAQGRLDAQLDIELKRSRADYIIDNSGTLAQTEQQVAVLWDRLGL
>NZ_CP009241|2519674:2530049|2528127_2528883_+|WP_038588977.1|DBSCAN-SWA
MLSPLFSLLLLAFALSLDGFGVGITYGLRKMKIPLLSIMIISLCSGIVICVSMQVGVLLAKVISPQAASSIGAIILVLMGCWSLVQMLIQKEKEHSPGGRETGTVLLSGVASKGEAATADLADTTAVSVSEIEKDAQKAAVFSLELRHLGVVIQILRTPSSADMDASGSISSMEAMLLGIALSLDAFGAGLGAALLGFSPVSTSLMIALFSGTFLLLGMRTGLKLSGRYWMKHAAVLPALMLIAMGIMKLL
>NZ_CP009241|2519674:2530049|2529485_2530049_+|WP_038599230.1|DBSCAN-SWA
MKWLRKKRVLLLLFVGFTGILFLSTNWMSWFYPIYYKAEIREHSITYDMDPFLVAAIIRVETNYKTGRESKKGALGLMQLMPDTAKWALEKAKLPDVSLQQLKREPSANIELGTWYLSSLSRQFDGNRTAVIAAYNAGPGKVKSWLEKGNWDGTAASVKDIPFGETRHYVQRVIYYYDQYTEIYSEF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038588962.1|2519674_2521468_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	1.6e-38	33.9
WP_038588964.1|2521672_2522401_+	response regulator transcription factor	W8CYM9	Bacillus_phage	3.0e-36	33.9
WP_076110646.1|2522541_2523336_+	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.9e-15	34.1
WP_038588969.1|2523404_2524064_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_038588972.1|2524385_2527049_+	DNA polymerase I	A0A218MKQ4	uncultured_virus	2.7e-58	32.8
WP_038588975.1|2527100_2527943_+	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	7.7e-20	29.0
WP_038588977.1|2528127_2528883_+	membrane protein	NA	NA	NA	NA
WP_038588980.1|2528892_2529486_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_038599230.1|2529485_2530049_+	lytic transglycosylase domain-containing protein	K4NWI2	Pseudomonas_phage	1.0e-15	39.0

Sequences of DBSCAN-SWA_5

Nucleotide sequences of DBSCAN-SWA_5

>NZ_CP009241|4342809:4350390|DBSCAN-SWA
ATTATTTCCCTCGTTTATTATGCCAGATGAGTGCATGAAGCTGAGGGAGCACCCGTGCCCGGTTCATCTCCGGATCGAAGATCACCTGATTAAACAGCCATTCCAGTCTACCCAGCAGACGTACGGAAATGTCACCTTCCTCCGTGACATCCTCATTGCCCGGCTGCAGGAACAGTGGCACCTCAGGGTATCGTTTATGCACTGCTTTGGCATATTCATAATCGCCTTCGTTAAAGACAACAACCTTCAGGCTATGGGCAGCTTTGCCTTTATCATGCAGCTTCCCCATAATGCCATCAAGGGTCTCCCAATCCGTCGTCATACCTGAGCTTGGCGGCTTGGGGCTGATTGTCAGCACATCCACATCGTTGAACCATTCCTGCCAGCGGCTGCCCTGCGTTTCGATTGCCGCTTGAATGCCCCGCTCGTGCAACCCCATGATGAAGGTACCCATCGCCTCGCCAATTAGTGCAGGGTTGCCACCGGAGATGGTTACACAGTCAAAATTATTTCCGGCTAGTGAGAGCAGCTCGGCCATAATCTCCTCTGGTGTAAGCATCCGCACCTTATCCTTGGCCGAACCATCCCATGTGAATGCGGAATCGCACCAGCTGCAGCGATAGTCACAGCCATAAGTACGGACGAACATGGTTTTCACTCCGATAACTGCGCCTTCCCCCTGAATGGTTGGGCCGAACATTTCTATGACCGGAATCTTACTCACAGTCACAACCCCCATGCATACGGTAGGAGGGTCCATCCTCCGGAATATCCTCAGCCAGCACCTCCGCCCAGGAAGTGGGCGTCTCCCACAGCTTAACGGAATATAGCGGCAACGCCACTTGCTTCAGCTTGTAGGCTATATAACACGCCATGTTCTCCACCGTCGTGCGGAAGGAGAGCAGCGCTACCTTCGATCCCGTATTTGTCAATGTATCCAGCACAGGCTCGTTGCCCATCGCCAGAAAAGCGTGATCCAGCCGGTCGACCAGACTCTGCTGTACCGTGCTTTTAATATCGCTGAAATCAATCACGAAGCCTTCGTCCGAATGCCCCTCCTCCAGGGAAGGTTTGCCCTTCAGGACCACTTCAAGCTTGTAGGTGTGGCCGTGGAGATTACTGCATTTTCCCTTATGTCCAATCAGCTGATGTGCAGCGTCAAAAGTGAATATTTTACAAACCGATACTTCGCCTAGCATTATAAGCCGACCTTCTTTCTCTCAGCCACATATTGCTCAAGGCCACGCTTGCGAAGCAAACATGCTGGGCAGGTGCCGCAGCCGCTGCCAATGATACCGTTGTAGCAAGTCAGAGTGTGCTGACGGATGTAATCAAACTGGCCCAGCTCGTCGGCCATCTTCCAGGTTTCTTTTTTATCCAGCCACATTAGTGGTGTATGAATGACAAACTCATAATCCATGGACAGATTGAGGGTTACATTCAATGATTTCACAAACACATCGCGGCAGTCTGGATACCCGCTGAAATCGGTCTGGCATACGCCGGTGACGATATTGGCATATCCTAGCTGCTTCGCCAGAATTGCCGCAAAGGACAGGAACAGCAGGTTCCGGCCATCTACAAAGGTGCTGGGCAATTCATCCCCTTCACCGGATACAATTTCTATATCATCACGGGTCAAAGCATTGGGTGCCAGCTGATTCAGCAATCCCAAATCAAGAATATGCTGCTTCACATTGAACTTGGCGGCAATTTCCTTGGCAACCTCAATTTCAGCGGCATGGCGCTGGTTATAGTTAAAAGTAACGACCTGAACTTCCTCGAAGTGCTGAATAGCCCACACGAGGCAGGTTGTACTGTCTTGTCCGCCGCTGAATACGACGAGCGCTTTTTTATTCATTTCACACTCTCTCCTCTCCACGATCTGGGATCATCGGTTATCCACTTTTTCTGGATATAGGTCATGATTAATCAGCCGGTGTTCGGCCATCGCCTCATACTTGGTTCCCGGACGCCCCCAGTTGCAGTAAGGATCAATGGATATTCCGCCGCGCGGGGTGAATTTGCCCCATACTTCGATGTAACGCGGCTCCATGAGCGAGATCAAGTCATTCATAATAATGTTGACACAGTCTTCATGAAAGTCACCGTGATTGCGGAAGCTGAACAGATAGAGCTTCAGGGACTTGGACTCGACCATCTTTTGCTCCGGAACGTACGAAATGTACATCACGCCGAAATCCGGCTGTCCGGTTACGGGGCACAGGCTGGTGAACTCGGGGCAATTAAACTTCACAAAATAATCGCGGCCGGGATGTTTGTTGTCAAACACCTCGAGAATTTCCGGATCATAGCCGAATTTGTACTGCGTCCCTTGATTGCCCAGCAGGGTGACCTCTTGCATTTCCTCTTTCAATCTGCCTTCTGACATGACAAAAAACCCCTCTCTTTTCCCGCGGCTTACTGCCGGAACTGGAAAGAAGAACGAGATTTCGAAAACATGGCCCTACTAAGAAATTACGCAGCATAGCAGGAAATAAGTATAGGCATCTCCCTATACTCCCTTAAGCCCCCTTCAACCGGAGACTTTACCTATGCATCAAGATGTCTTAGTTTTTTATAGAGGGAGTTTGCGAACCTCTCCTGCGATGTACACGCAGACTTCTTCTTAAGCTTATTATTAACGTCTTGAACTATAACATGATTGGCAGAAGATTGACAACCATAAAGAATTTTCCTGCTAACAGACTTATTGCCATCACTACTCTTTGCCGGTTCTCCAGATCCATAGTGCCAGAACGGTCATCCACAGCGGGAGCAGCAGACTCTCGAAAAGTAGCGGGCCGTCGCCGTTTAGAATACGATTTAAATTTTCCACGATTTCAATGCTTGGCAAAGCGGCGAAGAACGGATAAGTCCAGTCCGGCAGTGCCTGATATACGGAAGCAAGCAGGAAAAAGACAACCATGACCGCAGAGCTGACAGCAGAACCATTCTTAGAAGAGTCGAGCTTCAATCCGATGATCATTCCAACCTCCACAAAAAGGATCCCTCCAGCCAGCATATACGGAAAGACCGACAGCAATTCTGAGGCAAACCCCTGATTGAGCAGAAATACTACCGTTTGTGACAAGACAGAAAACAGCAGAACTGTTAAACCTTTGGCCACAAGAATCTGCCCTCTGCCAAGCGGTGATATAAGCAGCGCATCAAAGGTTTTACTTTCCCGTTCTTCAATGAGACCCGGACCGGTCATCATAATCCCTACCATAACCTGGGCGAACAAAATCCACGTTGACAGCAGCATAAAGTTAATCCCGTTTTTGTCCATGACCGAGATGATGATTTTGGACATAAAAATCGGCAGCATCACGAGAATAATTATAGAAGGATTGCGGAGCAAATCCTTGCATTCATGACGGATCAGCTTCGTCACTTGACTCAACTCAGCTCACTTCCCGTCAGGGCGGCGAATACGTCTGCCAAAGAAGCTTCTTTGCTATGCAGGCTGATAAGCTTCCCGCTCGCCATAAGCTGATAAATGTGGTCTTTCGTCATCTCGTCCGCCAATGGCCAGGATGTGCTCATCACTTTATCCTCTTGCCAGTATTCGGTTTCAATCTCTGCCTTTCCATAAGCCTTTTTCAAGCTCTGCGGGTTATCCAGTGCGACCAATCGTCCAGCATGCATAATGCCTACACGGTCGCTTAACTCCTCCGCCTCATGCATATCATGGGTGGTGATGACAATCGTAGTTCCTTCAGCCTTAATCCTCATTATGTATTTCCTGATAAGCGCCGCCGAGTTGGGATCCAATCCGCTTGTCGGTTCATCCATAAACAGTACTTTGGGCCTGTGCAGCAGGCTTCTGGCGATTAACACACGCTGCTTCCAGCCTTTGGACAAGCTGCCAACCTTGGAATTCTGTCGTTCCTCCAGTTGCAGGCTGCCAATCACTTCATCCACCCGCCCCTTGGCCACACCGTACAAATCGGCAAAAAGTTCAAGGTTATCGCGGATCGAACTGCGTACATATAGATTTGGCAGCTCAAAGACAACCCCGATCTGAGCGTGAACCTTCTTTTTATGTTGTGAAATATTCATGCCATTAATCACTATTTGTCCTTCACTGGGCTGAAGCAGGCCGGTCATCATGCGAATAGTTGTTGTTTTCCCCGCCCCGTTGGGGCCTAGAAAGCCAAATACTTCCCCTTCCCCCACTGAAAAAGACAGCCGGTCTACCGCCCGCTTCTCCTGAAACGATTTCGATACCTCCGTAAGCTGAATCAATGGCCTACCCGCCTTTGCCTAAAGTTTGCTTTCCTTCAAGCTTATTCGTAGAAATTGAGAATATCCCAAGGAACTGTTTCAGAAATATGGATTCAATTTCAACGAAAGGGGTAACTTAGAATTTATAATCTCTTAAATAAGGATGGGATCAACTTATGGATCAAACGGTACAGAAGCTTATAGATTGGCTCGATGCTCACGCAACCACAACCATTGTAATCAAAAAGCAGGAGCTTGAAGATCTCGATACAGTCCACTTTCAATTGGAAACCGTAGAGTACCGCACCGCTGAGGATACGATCGATGATTATCTGGATGATGCGCTTATCTTAAGAGGTTCAGGCAATACCCTGAATGCGGATGGTGAACTTGTGCCGCTTCCACAGCATAGTTATGAAATTGCCGTCAGCGGACTACGTTTGGATAATCTTGGTGAAGATAACGCGGAACTCCAGACAGATAGAGCCAAGTATGCTCTCTCCATAAGCTAATCGGAATACTAAGAGCCCACTACACATGTCTCTATGCAAAGAAAGGCCGCGGTAATTACTCCCGCGGCCAACGATATGAAGTTATTCTTCTCCGATAATTTCCACTTCAGTCTCCAGCTCGACTCCGAATTTATCCTTCACTGCAGCCCGCACATGCTGAATAAGTCCGATATAATCACTCGCAGTGGCATTATCTGCGTTGACAATAAATCCGGCATGTTTACGCGAGACTTCCGCACCGCCAATCCGGGTCCCTTGAAGCCCGCTTTCCTGGATCAGCTGTCCGGCATAACGGCCCGGCGGCCGCTTAAAGACACTGCCGCATGACGGGTATTCCAACGGTTGCTTGGATTCACGCAGATAGGTCAATTCATCCATGGAAGCTTTAATTAAAGCAGGATTTCCCGGATTTAGCGCGAATCTGGCTTCCAGCACGATATATTCACCGCTAGCAAAAACACTTTGTCTATATCCCCATTGAAACTCATCCCCTTGCAGGGTGACCAGCTGCCCCGCCTTATTGATCGCAAGTGCACTTTGCAGCACATCCTTAACTTCGCCTCCATAAGCGCCAGCATTCATGTAGAGAGCACCGCCAACTGTTCCGGGGATACCGCAGGCAAACTCAAGACCTGCCAGTTCCTGCTCCAGGGCATACCTGGATACATCAATGATCTTAGCACCGCACTGGGCGTACAGAAGATCTCCTTGAATCCCCATACTGTTAAGGCCTGAGGTCTGCAGGACGATCCCGCGGATCCCACCGTCACGGATAATTACATTTGAACCATTTCCCAGTACTGTGAGAGGAATATCATTTTTCCGGGCATATGTAACAATATTTTGAATTTCCTCATAAGTGACAGGTTCAGCCAGTATATCTGCACGGCCGCCCATTTGGGTGAATACATAATCCTTAAGCACTTCATGGCTTTTTACCGTACCGGCTGGAGCCAGTTGCTGCAGATCCTCTTGAATTTTGCTGATATTCATCCTTCATGCTCCTTTTACGCTGTGAAAATAATAAATCTTACCTTCTATAATGTTTATGTTGATCCAGCTTTACTTTGAACTATGGCAACCACAACTTTAACAACGAACAGGCTCCCTTGTCAATGACGGGAGCCTGCTGCGGTATGTCTGCTATTTTTAGTATGAAACAATTTTTACAGTTATATCCTAAACCTGCGACGATGCAGCTTGAATGCGGTATTCGGCTCTACGTGTGGCCCGTTCCTCTTCTTTCAGACGGGGGCAGGTATAGCAGACACTTCCGCCTTCAGTCCGATAATACAGACAGCAGCGGTTACGCATGTGTACCCTCTGCTCTGGATCAGCAAGCGATTCGATCTTACGTACCTCTACATCAAATGGATTTCTGGGAAGCTGGAACACTTCCGCAGCCAGGCCTTTCCTCAGATAACTGTAGTCGTCCTGCACGTGAATAAGAAATTCCTTATTGCTGTCGCCTGCTGCAAGCATTTCAATGTAGTAGTTGAACTTAGACGGGAGCTGTCCCCAGATCTCCCCCAGTCTCAATCCGCTGGCGGCAGACATTGTACGCAGCAGCGGGCTTGCTGTGTTCCTGTAGAACTCAGTGAACACTTTATTACGCCAAGTAACCCGACCCTGTTCGTCAGCAGGCGCTGGCTCCATCACCCAGGAATTCAAAGAGAAGGCAACGCGGCAATACCCGCTCGCCGGAATGAGATGAATGCGCAAATTAGATAAGTTGATCACCGGCACATTGGAATATAACGAGACCGAATATTGTACTGCTAGCGCCAAGCTGGAGAACCAGCCGCCGAAGTATGCAGCCACAGCCTTATCGTCCAGTGCCTTCATCAGCGGTCCGTAGCAGTCCACAAATGCTCTTATACCCTCTACATTAATCAGATCCTGCGCTGTAAATGAATACCTCGCCTCCTCTGGGGGAGATGGATAAAGATCAAATTTGCTGCCTATGTCTTTTATCTGTGCCTCATTCATTCCGTTTCCTCCTTAATTCCCCTAGCTAATCCTTCACTTGTCAATTACATGCCGACAGCTTTATAAGCAGCAAGCTCGTAAGGAAGGCATAAAGGTACACCTGTACGCGGATCGGGAACGATATCACATTCGATTCCGAATACTTTGCGAAGAACATCTGGTGTCATAACCTCCATCGGGTTCCCTTCGCTGATGACGGTGCCTGACTTGATCGCTACCATATGCTGCGCGTAGCGGGAGGCATGGTTCAAATCATGCACCACCATAATGATCGTGCGGCCCTCTTCCTGGTTCAGCTTCTGCAGCAGCTGCAGTACTTCCAGCTGGTGAGCCATGTCAAGGAACGTGGTCGGCTCGTCAAGGAACAGGATATCTGTCTGTTGTGCTAGAGCCATGGCAATCCAGGCACGCTGGCGCTGTCCACCGGAGAGGCGGTCGATTGGACGATCATGGAACTCTTCCATCCCGGTAACGGAAATCGCATTGGCGATAATCGCACGGTCTTCAGGAGTCATGGTGCCGAAGCCCTTCTGATGCGGGTAACGCCCGTATCCAACCAGTTCGGATACAGTCAGTCCGTCCGGTGCCGTCGGGTTTTGCGGCAGGATGGCCAGTTGACGAGCCACTTCTTTAGTAGATAGGGTATGAATTGATTTGCCGTCGAGCATGACATTGCCGCTCTTAGGTTTCATAATCCGCGCCATCGTCTTGAGAATCGTGGATTTCCCGGAGCCGTTCGCTCCTACCAGCGCTGTGATCTTCCCTGTTGGGAGAGACAGGTTCAACCCTTTAACAATCGTAGCCTCCGCATAACCAATACTCAGCTGTTCTGTATTCAAACGTTCCGACAT

Protein sequences of DBSCAN-SWA_5

>NZ_CP009241|4342809:4350390|4346210_4347059_-|WP_038592679.1|DBSCAN-SWA
MIQLTEVSKSFQEKRAVDRLSFSVGEGEVFGFLGPNGAGKTTTIRMMTGLLQPSEGQIVINGMNISQHKKKVHAQIGVVFELPNLYVRSSIRDNLELFADLYGVAKGRVDEVIGSLQLEERQNSKVGSLSKGWKQRVLIARSLLHRPKVLFMDEPTSGLDPNSAALIRKYIMRIKAEGTTIVITTHDMHEAEELSDRVGIMHAGRLVALDNPQSLKKAYGKAEIETEYWQEDKVMSTSWPLADEMTKDHIYQLMASGKLISLHSKEASLADVFAALTGSELS
>NZ_CP009241|4342809:4350390|4344006_4344669_-|WP_038592673.1|DBSCAN-SWA
MNKKALVVFSGGQDSTTCLVWAIQHFEEVQVVTFNYNQRHAAEIEVAKEIAAKFNVKQHILDLGLLNQLAPNALTRDDIEIVSGEGDELPSTFVDGRNLLFLSFAAILAKQLGYANIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLSMDYEFVIHTPLMWLDKKETWKMADELGQFDYIRQHTLTCYNGIIGSGCGTCPACLLRKRGLEQYVAERKKVGL
>NZ_CP009241|4342809:4350390|4343524_4344007_-|WP_038592670.1|DBSCAN-SWA
MLGEVSVCKIFTFDAAHQLIGHKGKCSNLHGHTYKLEVVLKGKPSLEEGHSDEGFVIDFSDIKSTVQQSLVDRLDHAFLAMGNEPVLDTLTNTGSKVALLSFRTTVENMACYIAYKLKQVALPLYSVKLWETPTSWAEVLAEDIPEDGPSYRMHGGCDCE
>NZ_CP009241|4342809:4350390|4347214_4347550_+|WP_038592682.1|DBSCAN-SWA
MDQTVQKLIDWLDAHATTTIVIKKQELEDLDTVHFQLETVEYRTAEDTIDDYLDDALILRGSGNTLNADGELVPLPQHSYEIAVSGLRLDNLGEDNAELQTDRAKYALSIS
>NZ_CP009241|4342809:4350390|4347631_4348543_-|WP_038592684.1|DBSCAN-SWA
MNISKIQEDLQQLAPAGTVKSHEVLKDYVFTQMGGRADILAEPVTYEEIQNIVTYARKNDIPLTVLGNGSNVIIRDGGIRGIVLQTSGLNSMGIQGDLLYAQCGAKIIDVSRYALEQELAGLEFACGIPGTVGGALYMNAGAYGGEVKDVLQSALAINKAGQLVTLQGDEFQWGYRQSVFASGEYIVLEARFALNPGNPALIKASMDELTYLRESKQPLEYPSCGSVFKRPPGRYAGQLIQESGLQGTRIGGAEVSRKHAGFIVNADNATASDYIGLIQHVRAAVKDKFGVELETEVEIIGEE
>NZ_CP009241|4342809:4350390|4349583_4350390_-|WP_038592689.1|DBSCAN-SWA
MSERLNTEQLSIGYAEATIVKGLNLSLPTGKITALVGANGSGKSTILKTMARIMKPKSGNVMLDGKSIHTLSTKEVARQLAILPQNPTAPDGLTVSELVGYGRYPHQKGFGTMTPEDRAIIANAISVTGMEEFHDRPIDRLSGGQRQRAWIAMALAQQTDILFLDEPTTFLDMAHQLEVLQLLQKLNQEEGRTIIMVVHDLNHASRYAQHMVAIKSGTVISEGNPMEVMTPDVLRKVFGIECDIVPDPRTGVPLCLPYELAAYKAVGM
>NZ_CP009241|4342809:4350390|4348729_4349539_-|WP_038592686.1|DBSCAN-SWA
MNEAQIKDIGSKFDLYPSPPEEARYSFTAQDLINVEGIRAFVDCYGPLMKALDDKAVAAYFGGWFSSLALAVQYSVSLYSNVPVINLSNLRIHLIPASGYCRVAFSLNSWVMEPAPADEQGRVTWRNKVFTEFYRNTASPLLRTMSAASGLRLGEIWGQLPSKFNYYIEMLAAGDSNKEFLIHVQDDYSYLRKGLAAEVFQLPRNPFDVEVRKIESLADPEQRVHMRNRCCLYYRTEGGSVCYTCPRLKEEERATRRAEYRIQAASSQV
>NZ_CP009241|4342809:4350390|4345530_4346214_-|WP_052092120.1|DBSCAN-SWA
MSQVTKLIRHECKDLLRNPSIIILVMLPIFMSKIIISVMDKNGINFMLLSTWILFAQVMVGIMMTGPGLIEERESKTFDALLISPLGRGQILVAKGLTVLLFSVLSQTVVFLLNQGFASELLSVFPYMLAGGILFVEVGMIIGLKLDSSKNGSAVSSAVMVVFFLLASVYQALPDWTYPFFAALPSIEIVENLNRILNGDGPLLFESLLLPLWMTVLALWIWRTGKE
>NZ_CP009241|4342809:4350390|4344699_4345200_-|WP_038592676.1|DBSCAN-SWA
MSEGRLKEEMQEVTLLGNQGTQYKFGYDPEILEVFDNKHPGRDYFVKFNCPEFTSLCPVTGQPDFGVMYISYVPEQKMVESKSLKLYLFSFRNHGDFHEDCVNIIMNDLISLMEPRYIEVWGKFTPRGGISIDPYCNWGRPGTKYEAMAEHRLINHDLYPEKVDNR
>NZ_CP009241|4342809:4350390|4342809_4343568_-|WP_156130889.1|DBSCAN-SWA
MDPPTVCMGVVTVSKIPVIEMFGPTIQGEGAVIGVKTMFVRTYGCDYRCSWCDSAFTWDGSAKDKVRMLTPEEIMAELLSLAGNNFDCVTISGGNPALIGEAMGTFIMGLHERGIQAAIETQGSRWQEWFNDVDVLTISPKPPSSGMTTDWETLDGIMGKLHDKGKAAHSLKVVVFNEGDYEYAKAVHKRYPEVPLFLQPGNEDVTEEGDISVRLLGRLEWLFNQVIFDPEMNRARVLPQLHALIWHNKRGK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156130889.1|4342809_4343568_-	7-carboxy-7-deazaguanine synthase QueE	E7DN68	Pneumococcus_phage	1.4e-60	48.2
WP_038592670.1|4343524_4344007_-	6-carboxytetrahydropterin synthase	A0A1U9WRB3	Streptococcus_virus	1.8e-26	49.3
WP_038592673.1|4344006_4344669_-	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	1.5e-63	53.5
WP_038592676.1|4344699_4345200_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	E7DN65	Pneumococcus_phage	2.5e-50	67.2
WP_052092120.1|4345530_4346214_-	ABC transporter permease	NA	NA	NA	NA
WP_038592679.1|4346210_4347059_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	8.6e-19	27.8
WP_038592682.1|4347214_4347550_+	hypothetical protein	NA	NA	NA	NA
WP_038592684.1|4347631_4348543_-	UDP-N-acetylmuramate dehydrogenase	NA	NA	NA	NA
WP_038592686.1|4348729_4349539_-	(2Fe-2S)-binding protein	NA	NA	NA	NA
WP_038592689.1|4349583_4350390_-	ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	6.1e-14	26.1

Sequences of DBSCAN-SWA_6

Nucleotide sequences of DBSCAN-SWA_6

>NZ_CP009241|5248697:5259182|DBSCAN-SWA
CTCAGCTGTCCCCCCGCTGAAAAAGTGCCCGCAGCGCACTGCCAAGCGCCTGCAGCCAGTTCCCCGCCGGATAAGCAGGGGCTAGGGCCGCGCTGTACTTCTTGGTATAAGCCGACTGTTCCGGGGGAAGCTGCTCCGGCTCATAAACGGGTACCCGGCCGATTTCCTGGCCGCCCAGCTGCAGGACTAGCACGCCTTTTAAGCCAAAATCACTGCTGCGCGCCTGTTTCGGCACAGCTGCTTCCCGTTTCAGCTCAAGCTTGGTAAACAGCCTCGCCTCTTCTCCCTGTCCAAGCGGGTAGGCAAAGGATTTACTGGTCACGTAGCTGTAACCGCTGATCCCTTCGCCGCGTTCGATTAACGTTTTGAGGGGATAATGATTGAAACCGAAATTCAGCAGGGATGCATGGTCATTCCAGTCATTTCCGTCATTGATTGTGACCGCAACCAGCTGCTGTCCGTTTCTTGTGGCAGAGCTGACAAGGCAGCGCAGCGCTTTTTTGGTATAGCCTGTCTTTACGCCGTCTGCTCCTTCATAGAGCCGCAGCATTTTATTTTTGTTGCTCCACTTGTAGTCCCATTTCTCATAAGGATTGTCCGCCGTCTTCTCCTGCGTCTTCACGATTTCCTTGAATACAGGATTGTGGAGCGCATAGGCGGTCAACACCGCCAGATCATTGGCACTGGAATAATGGCCTTCGGCATCCAGACCATGCGGATTGGCAAAATGGCTGTGGGTTAAACCAAGCGCCTCCGCCTTCTGATTCATCAGATAGACAAAACCCTGCTCAGAACCGCCGACATGCTCGGCTATTGCTGTTGCTGCATCATTTCCCGAACGCAGCATCATCCCGTACAGCATATCCTCCAATTTCATTTCTTCCCCTTGCTTCAAAAACAGTGAAGATCCTTCCTTGGCAAAAGCGTTTTTACCTACTTTGACCTTGGAGGTCAAATCCCCATTTTCTATAGCCACTATGGCGGTCATAATTTTGGTCAGACTGGCGATCAGCATAGGTTCATCTCCCCTGCTGCTGTACAGAAGCCTTCCGGATTCCACGTCAATCAGAGCCGCAGCCCTGGCATGAGTGGAGATGGAGCTGTTTTCGGCCCGGAGTACTGGCAGCGGACGCAAAACAACTAGCAACAGGCACAATATCAGGATCAAAGACGATTTAAAAGTTAATCTCTTCATGTTCATCCTCCGGCTTCTTTCTTCTCAGTTCTTAAGTCAGGTTAAGGTGCGGATCACGCTATGTTGTACAAGTGTATGCAGCATGGCGGACAGGTATGTCCCTCTCTTAAGTCCTCTCTATGTATGAGGATTGGATACCGACTAGGTAACTCTCAAAAAAAGGGATACCGCCCCGGTTAAGGCGATATCCCTGATTTCTCCGCTAGTGTGTCGATGAATTGCTGGCTGCAGGATCTGTTTTAACTGCTTGCTTTGCAGCAGGGGCACCTACAACTTCCGCCCCGACAGGAGCACCATTTTGGAACATATTCTGGATTTTGTCGATCAGCGCTGGAGTGGCGTCGATGATTTTCTCGAACAGATGGGTTTGATTATCAAGCGGCACAATATGCACGCCTTCCCTGCCCACTACGAGAAAAGCGATCGGGCGAATGGATACACCGCCCCCGCTACCGCCTCCGAATGGAAGCATTTTAACGCTGGAGCCGCTGCCGTTCACACCCGGCGCATCATCCTCCACCCGAAAGTCGCTGCCCCCTGCGGCAAAACCAAATGCCACTTTGCTGATCGGCAGAATGACGCTGCCATCCGGTGTCTCTACAGGATCTCCGACAATTGTATTAACATCCACCATGCCTTTGATATTTTCCATCGCGGTCTGCATCAGACCTTGAATCGGATGGTCACTCATATTATTATCCTCCTTTAACTTCTAGGGAAATACTCTTTCTTCCACAGCGTATATCATTCCCATATCACTACATTTGTATGTAAGTCGTTTCTATCTTCCGGGCAGTTGGAGCTTCCCTTACTGTTTGTGGCTCAATAGCTGTTTCCACCGGGCCAGTCCCCCCTTCACTTTAGTGATCCGGCGCAGCAGCAGTATTCCCGCGTAAAGGGTGTAGGCTAAGGACAGTTTGCCGGCACATACTGCCTCTGTGGAGTAGCACAGCTCATCGCGGAACACCGGTGCGACAAACAGACGCGGAGCGTGCTGCAGCCGGACGAATTGCGAAACCCAGCCAATAAGGCTCCATTTCATTCCCCACAGAGCCCCCGCTGCTGTTGCTGTATAGGCTGCATCGCCAAGCGAAAAATCCGTCGACCAGTCGAGCTTTGATATTTTGACATGGGCCATCAGCCCTTTCAGCCACTTGTTCAACCCCCGGGTCGCCCGCAGCGCTGCCTTTAGATTATCGATCCAGCCTGACACAGCCTCCTTATCAATTTGCTCCTCTTTATCGGCATCCTTCTTCACGGGTGCGATCCCGCTTTCTTCCAGCTTCACCCTCACTCCCCGCTCCATACCCTCATATACGAGTGCTGGCAGTTCATAATGAAACTTAACTAACCCAAATAAAGCCTTAATATCAAATTCCACCCGGTCATCCTTGCCAAGTCTGCACAATCGGAAGTGAAAATGAATGGAAGAAGACAGGACCAGTACAATGACAACCAGCAGAAGAGCCAAAGGTATAACAAGCCATAACGTCACGGATTACCCTCCAAGCATCCTTATAATAGGAACCTTTGGTTTAGTATGGCAAACTTGGCTGGAAAAAATTCGGATGGACGCAAAAAAACCGTTGTTCTCCTAGGAGACAACGGCATTTCAACATAAATTTACAGCTCACAGTTGATCCGTATGAGGATGCTTTACTCCTCAATACCCTGCGGCTGCTCAACATCATCGAACGTCATTTGGCTGTCCAGCTTGCTGAAAAGAAGCTGTGTCTCCTCTTCCAGCCCGTCGGAGTTATCGAAGTTAGACGGCTCCGGCAGCTCCTTCAGGCTGGCCAGTCCAAAGCTGTCAAGGAACGATTTGGTCGTTCCGTAAAGGATTGGACGGCCTACAGCCTCGGCACGCCCGACCTCATGAATGAGATCCTTATTGTTCAGCGTATGAATCGCCCGTTCAGACTTTACCCCGCGGATCTCCTCAATCTCCACCCGGGTAATCGGCTGGCGGTAGGCCACAATGGCCAACGTCTCCAGCGCCGCCTGGGATAAAGAAGATCTTGAAGGCGAATAGGCCAGCCGTTCAAAATAAGCCGCATGCTCCGGCAGCGTAGCCAGCCGGTAATTCCCGGCGATCTGCACGACCTGCAGACCGCGGCCCTGGTTGATGTAGTCGTCCTTCAGCTCTTCCAGTGCACTTGTCGCCAGATCTGGACGCTGCTCGGTGATTTCGGCGATTTGACGCGCCGACAACCCTTCGTCGCCAGACAGAAACAGCAATCCTTCAATAATCGATTTCAGCGTTTTGTAATCCACTGAATTCCTCTCCTCCTCTCCACTCCATCACAATATCCTCAAACAATTTCTCCTGATAACAGTAAATGGCCTTCATCTTCATCAGCTCCAGGATCGCCAGAAAGGTAGTCACGATCTCATGTCTGGCCATCTCATCATGCAGCAGCGCCGAGAAGCGCAGCCTGCCGCCCACCCCTTTGCGCTGCAGCGCCTCTGAAACATCACGAATCCGGTCCTTGACTGAAATTTCATCGCGGGTAATCCGCTGATAAGAGGATCTTCGAGCCGCCTTGCTAAGCGCCTTGCGGAATGCGGCGATGAGGTCAGACGTATGTAACCCTTTCAGTGTGTTATCAATCTGCGTCGGCACGAAAGGACCCAGATCCTCCGGCTCCTTCGTAAAGATCAGACTGCGTTCGCTCTCCATATCCAGCAGCTGCACAGCAATGTTCTTGAATTTACGGTATTCAATCAGCCGCTGAACCAGTTCTGCACGCGGATCATAGCCATCATCCTCGTAATAGTCGAAATCCTCGATCTCAATGACCGGCGGCTTCGGCAGCAGCAGCTTGCTCTTGATGGACAACAGGGTTGCAGCCATAACGAGAAATTCGCTGGTGATATCCAGTTCAAGCTCCTGCATCGTTTGCAGGTAATCCATGTACTGTTCGGTAATCACGCTGACCGGAATGTCCTGGATGTCGATTTCCGCTTTGTCAATTAGATGCAAGAGCAGATCGAGCGGACCTTCGAACGTCTCCAGCTTGTACAATACAGTCACGCGGTTTCCTCCCGCCAAAAAAAAGTAAAGTGCAGCGCCGCTATAGGGACGCTACACAAGTAGAAAGGGTTTTTATAGTCCATGCTTTCTTCTTATACTTATAAATAAGCACGATTATAGTTGTTTCGTCAAGAGGCTGTCTTACTTAAAGAGCTTGTTAAGGTTTGCCATTTCGATAGCCGACGTCGCAGCATCCCAGCCTTTGTTGCCTGCTTTGGTTCCGGAACGCTCGATGGCCTGCTCAATATTCTCGGTCGTAACAACACCGAAAATAGTAGGAATACCCGTTTTAAGATTAATGGCTGCCACCCCTTTAGCCACTTCGTTGCATACATAATCATAATGCGTAGTGGAACCGCGGATGACGGTGCCCAGCGCGATGACGGCATCATATTTGCCGCTTTCGGCCATCTTTTGGCAAATCAGCGGAATTTCGAAAACGCCCGGAACCCATGCCACATCCACCTCTTCATCGGCAACACCGTGGCGTTTGAACGCATCCAGTGCACCGGACAGCAGCTTGCTTGTAATGAACTCATTGAAACGTCCTACGACTACCCCGTATTTTAAACCCTCGGATACTAAATGTCCTTCAAAATAATTCGGCATTGTGCTCATCAACCCTTCATTGGTAAGTTAGTTTTATGGTTAAATTTTGGAATCTTCATTTTGTTCAATATTGTCAAAAGTCAGTAAATGTCCCAGCTTGGCCTGCTTCGTATGAAGATAATTCGTGTTGTCCTTGTTCTCCGGCATTTGAATCGGCACACGCTCCACAACCTCAAGGCCGTAGCCTTCCAGTCCCTTGATCTTGCGCGGGTTGTTGGTCAGCAGTTTGATCTGGCGTACGCCAAGATCCTTAAGAATCTGTGCCCCGATACCGTAGTCTCGCAGGTCTGCCGGGAAGCCGAGCTTCAGGTTGGCATCCACCGTATCCAGACCTTCCTCCTGCAGCTTGTAGGCACGCAGCTTATTAATGAGGCCGATGCCTCTGCCTTCCTGGCGCATGTAGAGCAGTACTCCTCTGCCAGCCGCTTCAATCTGGCGCAGCGCTGCTTCAAATTGCGGCCCGCAGTCGCAGCGGTGCGAGTGGAACACGTCACCGGTCAGACATTCGGAATGCACACGGACCAGCACCGGCTCCTCGCCGGAAATGTCGCCTTTGACCAGCGCGACATGCTCTTTGTCATCCACTTCGTTCGTGTAGGCAATCGTCTGGAAAAGACCGAAATCCGTAGGCAGATTCACTGAAACTTCACGGGTGACTAAATGCTCCTTCTCGTTGCGGTAATGGATCAGGTCCTTGATGCTGATCAGCTTCAGATCATGTTTCTTGGCGATCTCGATCAGATCCGGCAGCCGGGCCATCTCTCCGTCTTCTTTGACCACTTCACAGATGACGCTTGCCGGATATGCGCCGCACATGCGGGCTAGGTCAACAGCAGCCTCAGTGTGGCCGGAACGGCGCAGTACGCCGCCTTTCTTGGCAATCAGCGGGAACATATGCCCCGGTCTGCGGAAATCGGACGGTTTGGCGTTGGGGTCCATAATCGCTTTGATGGTCATGGATCTTTCACCTGCGGAAATACCGGTTGTGGTATCTTTATGGTCGATGGACACGGTAAAAGCAGTGCCATGATTGTCAGTATTCTGGCTGACCATCGGCTGCAGATCCAGCTCCTCCGCACGTTCCGCCGTAATCGGCAGGCAGACCAGCCCCCGGCCTTCCTTAATCATGAAATTAATTACTTCCGGTGTAGCGCGTTCGGCAAGAGCAATGAAGTCTCCTTCATTCTCGCGGTCCTCATCATCAACTACGATGATCACCTTGCCGCGCATCAAATCATAAATAGCGTCTTCAATCGGGTCCAGGACGCTGTCTTGCTTGGGCTCTTGGCTCATGTTTCTGTCCTCCTATATCACTTTACGTTGCCCTCACAGGCTATCCGTAAGCCTAGTCTTATTTATACAAACCCGTTGGCCGCCAGGAAATCGCGGCTGATCCGGGAACTGTTCTCATCTTCCTCATGTCCTGCGCCCGCACTGTAATGCAGGAGATGATCCACATACTTGCCAAGCACGTCACACTCAATGTTGATGCTGTCGCCTGAGCGTTTGTGCGTAAGTACAGTTTCTCCAAGCGTGTGCGGAATAATCGACACGGTAAACGCTGCAGCCGTCGTATTTACGACCGTCAGGCTGATGCCGTCAATCGTGATGGAGCCTTTAGGAATAATGTATTTGAACAGCGATTTGCGGTCCGGTGCAATTTCGAACACAACCGCATTCTGGTCACGCTTCACGCTCCGGATTTCGCCGGTGCCGTCGACATGCCCCTGAACGATATGCCCGCCGAAACGCCCGCCGGCGGCCATTGCCCGTTCCAGATTCATTTTGCCGCCGGTCCGCAGCTCCTTCAGGTTGCTGTTGCGGTAGGTCTGGGGCATCACATCGACGGTAAAATAATGGTCGCCTAAAGACGTTGCGGTCAGGCAGACCCCGTTGACGGATACACTGTCGCCAATCTTCAGGTCATCCATAATGAGGGAAGCGCCGATATTCAGCACCATCATCTCGCCTCCGCTGGAGACACTGCGCAGCACACCGATCTCCTCAATTAAGCCGGTGAACATAGAACCCCTCCTACAAGTTTGGTTAGGATCACTGCAAGCATATGCTTAAGCTTTGTTAGCATCTGCTGTTACTTAGCGGATTGGAGTGCCGCTGATACACACATTATCCCCGAGCACTTCCACTTCCAATCCCTCAAGCGTGATGGCGTCCTTCATCAGCCCGACACCCGGGAATTCGAAGGTTCCGGCCGCTCCGGCCCCGCCGCCGACGATCTTGGGAGCGAAGAACAGCACCACGCGGTCAACCAGTCCGCCCTCCAGCATGGAGCCGTTCAGTGTGCCTCCGCCTTCCAGCAGTATGGAGCCGATCTCCATCTCGCCCAGCTTAGTCATGGCACTTTGCAGATCCACGCGCGGCCCCGTGCCGCAGATGATGACTTGAACCCCTGCCGCCACAAGCGCCTCATGCTTGACCGGATCGGCTGCTTCTGTAGTCACCACAACTGTAGGTGCCTGCCCGTCGGTAACAACGGCGGAGTCCAGCGGGATACGCAGCGAAGAATCGATCACAATCCGGACAGGGTTGAGTCCGGGTACCACCATTCTTGTGGTCAGGGAAGGATTATCGGCAATAACCGTATTGACGCCGACCATAATTCCCTGATGACGGTGCCGCAGGGTATGTACTATCTCCCGTGCCTGCCCGTTAGATATCCACTTGCTGTCCCCGGTCCGGGTAGAGATTTTGCCATCAAGTGTACTGGCGCTCTTCAGTGTGACAAAAGGTTGCTTCGTCAGAATGTACTTGATGAACTTCTCGTTCAGCCGCAGGGCACGGCTGCGCAGCAGCCCCACTTCAACTTCGATCCCTTGATCCCGCAGCATGGCTATGCCCCGGCCTGCTACCTGCGGATTGGGATCTTCACACGCTACCACTACACGAGCTACACCTTCATCAATCAGCCTTTGGCTGCAGGGCGGCGTCTTGCCGTAATGGCTGCACGGCTCAAGGGTCACATATGCTGTACTTCCCTGCGCCTTGCCGGCCGCCATATTCAGCGCATGCACCTCGGCATGCCCTGTTCCGCGCTGCAAATGAGTGCCGAGGCCGATCACCGCGCCGTCCTTCACTACAACACAGCCCACCACCGGGTTGATGCCTGTCTGTCCCTGTGCTCTTTCCGCCATATCCAGCGCCAGCGCCATATAAAACTGGTCGTTCATTGTATCCATGCCTTGCCTCCAATCCCATTGCCTTGTATTCATGCTTCCAGTCCAAAACAGAAAAACCCGTCTCAATCTCCAGGTGGAGTTCAAGACGGGTTATACGAGAGTTTGCCGGCAGTCCAATAAAATGGTGCGTAAATAAACGCCACTAACATGGCATTGTGAAAGTTCGCACATAATATTCGAAAACACTGCAGTACGCCTGCCTATACAAAGCACAGAACGTCAATCTCTCCTTCTTCCATCCAGACTATACTGTCGGTCCCGGAATTACACCGGGTCCACCGTCCGTATGCAACATACGAAGCGGGTAGCGGACTAAGCGCTGATACTGGCATTTCGGCCATATACAGCAGCATCACCGCCGGTAGGGAATTACACCCTGCCCTGAAGGATTGATATATTCAATTGAATTAAGTTTTGCCTACAACAAAATTATCACTTAGCGGCAGGAAAAGCAAGTGCATTTAATATATTTACTTTATTTATGTAACCTACTTCTAGATTTCACTCTGTTTTTCCGCCCGCAGCAAATCGCGGATTTCTGTCAGCAGGGCAATTTCCGGATCTGGTGCCGGGGTTTCGACCACTTCGACTTTTACGACTTCCTTGCGTTTAAATTTGCCTACCAGCTTAATCACCAAAAAGATGGAAAAAGAAATAATAAAGAAATCTACCACTGCCTGCAGGAACAAGCCGTAGTTCACCGTTGCCTCTCGGAAAGTGAAGCTAAGCTTCTTCAAAGGGTCAATCCCTCCGCTAAGCATCCCCACCAGTGGCATAATAATGTCGGCGACCAGGGAGGTAACGATTTTACCGAAAGCTGCCCCGATGATGACAGCAACGGCGAGATCAAGCACATTTCCTTTCATGGCAAAACTTTTGAATTCCTTCCACATTGCAGATTCCCTCCAAAACTTCGAATTTAAACTATTATAGCATTTCCCCTGCGGATGACAATAAATCTCCGGCCTTGTTCTCCCGGAAAGGAGAATTTTCTTAAGAAAATCATTAGATTTAGTGCCGGTAAGTCTTTAGAACTGAGTCTTAAAGTGATTGTTATACCAAATCTGTTGTAAACGAGGGGTCAAAATGTTATTTAATTCGTACATCTTTATGTTCGGCTTCCTGCCTGTTGTGCTGGCCGGCTACTTTGCACTAAACCGCATCCGCCTGTTTAAGTACGCCAAGTTGTGGCTTGCGCTGTCCTCTCTGGTCTTCTATGGCTGGTGGAATATCCGCTACATCCCGCTGATCCTCTTGTCCATTCTGTTCAACTACACGCTTGGCTGGTATATACACAGCGGAAAATCCCGCCCCCGCACACTGCTAATCTTCGGCTTAAGCGCCAATCTCCTGCTGCTGGGCTACTACAAATATGCCGATTTTTTCATCACGAACTGGAATGGGCTGACGGGTTGGAATGCGGCTCCCCTTCACCTACTGCTGCCGCTTGGGATCAGCTTTTTCACCTTTACCCAAATTGCCTATCTCGTCGACACCTACCGGCATCAGGCACGTGAATACGGTCTCGTCAATTACATACTATTCGTTACCTTCTTCCCCCATCTGATTGCCGGTCCGATCCTTCACCACAAGGAGATGATGCCTCAGTTCGACAGACTGCGGGGCAAGCTCTGGAACTGGAACAATGTCCTCAAGGGTACCCTGCTGTTCAGTATCGGCCTCGGTAAGAAAGTGATCATCGCGGATACCCTGGCCGGCTTTGCCAATAACGGCTTTACCTCCGCTGCTCATTTCGTGGACTCCTGGGTGGCTGTGCTGTCCTATACCCTCCAGCTTTACTTTGATTTCAGCGGGTACACGGATATGGCGATCGGCATTGCCCTGCTCTTCAATATTGTACTGCCGCAAAATTTCAATGCTCCATATCGCGCCCTGAGTATCCGTGACTTCTGGAGACGCTGGCATATGACGCTCAGCCGCTTCCTTAGGGATTATATCTATATTCCGTTTGGGGGCAACCGCAAGGGCTTCTGGATCTCCATCCGTAATGTGATCATTACCTTTCTGCTTGGCGGCATATGGCATGGGGCAGGCTGGATGTTCGTACTCTGGGGGCTGCTGCACGGAGTCGGGCAAGCGGTAGAGAAGCTGTGGGCACGCCGGGGTACGCCATTGCCCAAGGGTATCGCATGGCTACTCACCTTCGCCTTTATAAATGTAACCTGGGTATTCTTCCGCGCGGAGAATCTTACGATAGCCTTTAGACTATTAAAAGGAATGAGCGGAATAAACGGTTTGGGAACTTCTGCAGTCAGCGGCTTAAAGTGGGCTATCGTCCTAATTGTTATCCTGCTCGGCGTGATCCTGCTGCGGCACAAGACAGAAATTCAGGTGCGAAGCTGGAAGACGGTTATGGCCATGGCTCTGATCTTCGTCATTTCCTTGTTCTTCTTCAACCGTATCACTCCGTTCCTGTATTTTAACTTCTAA

Protein sequences of DBSCAN-SWA_6

>NZ_CP009241|5248697:5259182|5251547_5252165_-|WP_038594607.1|DBSCAN-SWA
MDYKTLKSIIEGLLFLSGDEGLSARQIAEITEQRPDLATSALEELKDDYINQGRGLQVVQIAGNYRLATLPEHAAYFERLAYSPSRSSLSQAALETLAIVAYRQPITRVEIEEIRGVKSERAIHTLNNKDLIHEVGRAEAVGRPILYGTTKSFLDSFGLASLKELPEPSNFDNSDGLEEETQLLFSKLDSQMTFDDVEQPQGIEE
>NZ_CP009241|5248697:5259182|5248697_5249897_-|WP_038594601.1|DBSCAN-SWA
MNMKRLTFKSSLILILCLLLVVLRPLPVLRAENSSISTHARAAALIDVESGRLLYSSRGDEPMLIASLTKIMTAIVAIENGDLTSKVKVGKNAFAKEGSSLFLKQGEEMKLEDMLYGMMLRSGNDAATAIAEHVGGSEQGFVYLMNQKAEALGLTHSHFANPHGLDAEGHYSSANDLAVLTAYALHNPVFKEIVKTQEKTADNPYEKWDYKWSNKNKMLRLYEGADGVKTGYTKKALRCLVSSATRNGQQLVAVTINDGNDWNDHASLLNFGFNHYPLKTLIERGEGISGYSYVTSKSFAYPLGQGEEARLFTKLELKREAAVPKQARSSDFGLKGVLVLQLGGQEIGRVPVYEPEQLPPEQSAYTKKYSAALAPAYPAGNWLQALGSALRALFQRGDS
>NZ_CP009241|5248697:5259182|5257225_5257624_-|WP_038594612.1|DBSCAN-SWA
MWKEFKSFAMKGNVLDLAVAVIIGAAFGKIVTSLVADIIMPLVGMLSGGIDPLKKLSFTFREATVNYGLFLQAVVDFFIISFSIFLVIKLVGKFKRKEVVKVEVVETPAPDPEIALLTEIRDLLRAEKQSEI
>NZ_CP009241|5248697:5259182|5255630_5256731_-|WP_038594611.1|DBSCAN-SWA
MDTMNDQFYMALALDMAERAQGQTGINPVVGCVVVKDGAVIGLGTHLQRGTGHAEVHALNMAAGKAQGSTAYVTLEPCSHYGKTPPCSQRLIDEGVARVVVACEDPNPQVAGRGIAMLRDQGIEVEVGLLRSRALRLNEKFIKYILTKQPFVTLKSASTLDGKISTRTGDSKWISNGQAREIVHTLRHRHQGIMVGVNTVIADNPSLTTRMVVPGLNPVRIVIDSSLRIPLDSAVVTDGQAPTVVVTTEAADPVKHEALVAAGVQVIICGTGPRVDLQSAMTKLGEMEIGSILLEGGGTLNGSMLEGGLVDRVVLFFAPKIVGGGAGAAGTFEFPGVGLMKDAITLEGLEVEVLGDNVCISGTPIR
>NZ_CP009241|5248697:5259182|5254889_5255558_-|WP_038594610.1|DBSCAN-SWA
MFTGLIEEIGVLRSVSSGGEMMVLNIGASLIMDDLKIGDSVSVNGVCLTATSLGDHYFTVDVMPQTYRNSNLKELRTGGKMNLERAMAAGGRFGGHIVQGHVDGTGEIRSVKRDQNAVVFEIAPDRKSLFKYIIPKGSITIDGISLTVVNTTAAAFTVSIIPHTLGETVLTHKRSGDSINIECDVLGKYVDHLLHYSAGAGHEEDENSSRISRDFLAANGFV
>NZ_CP009241|5248697:5259182|5250699_5251386_-|WP_038594605.1|DBSCAN-SWA
MTLWLVIPLALLLVVIVLVLSSSIHFHFRLCRLGKDDRVEFDIKALFGLVKFHYELPALVYEGMERGVRVKLEESGIAPVKKDADKEEQIDKEAVSGWIDNLKAALRATRGLNKWLKGLMAHVKISKLDWSTDFSLGDAAYTATAAGALWGMKWSLIGWVSQFVRLQHAPRLFVAPVFRDELCYSTEAVCAGKLSLAYTLYAGILLLRRITKVKGGLARWKQLLSHKQ
>NZ_CP009241|5248697:5259182|5257817_5259182_+|WP_038594613.1|DBSCAN-SWA
MLFNSYIFMFGFLPVVLAGYFALNRIRLFKYAKLWLALSSLVFYGWWNIRYIPLILLSILFNYTLGWYIHSGKSRPRTLLIFGLSANLLLLGYYKYADFFITNWNGLTGWNAAPLHLLLPLGISFFTFTQIAYLVDTYRHQAREYGLVNYILFVTFFPHLIAGPILHHKEMMPQFDRLRGKLWNWNNVLKGTLLFSIGLGKKVIIADTLAGFANNGFTSAAHFVDSWVAVLSYTLQLYFDFSGYTDMAIGIALLFNIVLPQNFNAPYRALSIRDFWRRWHMTLSRFLRDYIYIPFGGNRKGFWISIRNVIITFLLGGIWHGAGWMFVLWGLLHGVGQAVEKLWARRGTPLPKGIAWLLTFAFINVTWVFFRAENLTIAFRLLKGMSGINGLGTSAVSGLKWAIVLIVILLGVILLRHKTEIQVRSWKTVMAMALIFVISLFFFNRITPFLYFNF
>NZ_CP009241|5248697:5259182|5253573_5254827_-|WP_052092204.1|DBSCAN-SWA
MSQEPKQDSVLDPIEDAIYDLMRGKVIIVVDDEDRENEGDFIALAERATPEVINFMIKEGRGLVCLPITAERAEELDLQPMVSQNTDNHGTAFTVSIDHKDTTTGISAGERSMTIKAIMDPNAKPSDFRRPGHMFPLIAKKGGVLRRSGHTEAAVDLARMCGAYPASVICEVVKEDGEMARLPDLIEIAKKHDLKLISIKDLIHYRNEKEHLVTREVSVNLPTDFGLFQTIAYTNEVDDKEHVALVKGDISGEEPVLVRVHSECLTGDVFHSHRCDCGPQFEAALRQIEAAGRGVLLYMRQEGRGIGLINKLRAYKLQEEGLDTVDANLKLGFPADLRDYGIGAQILKDLGVRQIKLLTNNPRKIKGLEGYGLEVVERVPIQMPENKDNTNYLHTKQAKLGHLLTFDNIEQNEDSKI
>NZ_CP009241|5248697:5259182|5252133_5252925_-|WP_038594609.1|DBSCAN-SWA
MTVLYKLETFEGPLDLLLHLIDKAEIDIQDIPVSVITEQYMDYLQTMQELELDITSEFLVMAATLLSIKSKLLLPKPPVIEIEDFDYYEDDGYDPRAELVQRLIEYRKFKNIAVQLLDMESERSLIFTKEPEDLGPFVPTQIDNTLKGLHTSDLIAAFRKALSKAARRSSYQRITRDEISVKDRIRDVSEALQRKGVGGRLRFSALLHDEMARHEIVTTFLAILELMKMKAIYCYQEKLFEDIVMEWRGGEEFSGLQNAEIDY
>NZ_CP009241|5248697:5259182|5250093_5250582_-|WP_038594603.1|DBSCAN-SWA
MSDHPIQGLMQTAMENIKGMVDVNTIVGDPVETPDGSVILPISKVAFGFAAGGSDFRVEDDAPGVNGSGSSVKMLPFGGGSGGGVSIRPIAFLVVGREGVHIVPLDNQTHLFEKIIDATPALIDKIQNMFQNGAPVGAEVVGAPAAKQAVKTDPAASNSSTH
>NZ_CP009241|5248697:5259182|5253066_5253534_-|WP_038600255.1|DBSCAN-SWA
MPNYFEGHLVSEGLKYGVVVGRFNEFITSKLLSGALDAFKRHGVADEEVDVAWVPGVFEIPLICQKMAESGKYDAVIALGTVIRGSTTHYDYVCNEVAKGVAAINLKTGIPTIFGVVTTENIEQAIERSGTKAGNKGWDAATSAIEMANLNKLFK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038594601.1|5248697_5249897_-	D-alanyl-D-alanine carboxypeptidase	A0A1P8VVG5	Erythrobacter_phage	9.0e-06	30.6
WP_038594603.1|5250093_5250582_-	sporulation protein YtfJ	NA	NA	NA	NA
WP_038594605.1|5250699_5251386_-	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_038594607.1|5251547_5252165_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	4.2e-15	33.5
WP_038594609.1|5252133_5252925_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	4.1e-07	36.2
WP_038600255.1|5253066_5253534_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	1.0e-42	56.3
WP_052092204.1|5253573_5254827_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.0e-117	53.4
WP_038594610.1|5254889_5255558_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.7e-36	38.9
WP_038594611.1|5255630_5256731_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.3e-54	36.1
WP_038594612.1|5257225_5257624_-	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA
WP_038594613.1|5257817_5259182_+	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	3.0e-122	47.5

Sequences of DBSCAN-SWA_7

Nucleotide sequences of DBSCAN-SWA_7

>NZ_CP009241|5359515:5373155|DBSCAN-SWA
ACTAAAAACCGATTGATTTGCCATCTACCGCCAGCATGGCTTCTCCAATAATCTCGGAAAGGGTCGGATGGGCATGGATGGCTTCGCCGATCTCCCAAGGGGTGGCGTCCAGCAGCTGCGCCAGCGCCGCTTCGCCGATGAGATCGGTCACATGCGGTCCGATCATTTGAACACCGAGAATATCCCCGCTGCTGCGGTCGGCAACGACTTTGACAAAACCGTCCTTCATCCCGTAGACGATAGCTTTGCCGATAGCCGAGAATGGAAATTTCCCTGTCACGACATCATGGCCGAGATTCTTGGCCTCTTTCTCCGTATATCCGACACTGGCCACTTCCGGCCGTGTGTAGACACAGCGGGGAACCTGATGGATATGATAGGGATAGAGCTTCTCACCTGCCAGATGGTTCACCGCGCGAATACCTTCATGGCTGGCGGCATGGGCCAGCTGCAGGCCGCCGATGCAGTCGCCGATACCGTAGATATGCGGCTCATTTGTCTGCATGTTAGCATTAACCTCAATCACACCTTTATCGAAGTGGATATCGGTATTTTCCAATCCAATATTTTCGATATTGGCTACTCTGCCGACAGATACCAGCAGCTTCTCTGCGGACAAGCTCTGGCTCTGTTCCCCCTTGCGGGCTTCAATGGTTACGCCGTCCTCCGTTACCACACAAGTCTCAGCATCCACGGTTGTCCCCGTCAGAACTTTGACCCCGCGTTTTTTGAGCAGACGCAGCAGCTCCCGGGCAATTTCCTCGTCTTCCAGCGGCAGCAGCTGGCCAGCGGCCTCGACCACAGTCACCTGTACACCGAAATCAACCAGCATTGAAGCCCACTCCACACCGATTACTCCGCCGCCTACTATAATGATCGAAGACGGCAGCTCTTCAAGCGTCAGCGCTTCTTCACTGCTCAGAATAACCTTGCCATCCGGTTTAAGTCCCGGCAGCACTCGGGGGCGTGAGCCTGTAGCGACAATAAGATTGGATGAGACCACAGTCTCCATCTCGCCATTCTCCAGTTCCACCGCCACAGCACCGCTGCGCGGGGAGAATATCGAAGGCCCGATGATCCGGCCTTTCCCTTTGAGGACCTGGATTTTATTCTTGCGCATCAAAAATTGCACACCCTCATGCAGCTGTTCCACCACAGCTTCCTTGCGGCGCTGCACCTTCGGGAATACCAGCTGCACACCTGTTGTTTCGATGCCATAACTTTCGCTCTCATTTATCTCAGCATAGACTTCTGCGCTGCGCAGCAGCGACTTGCTTGGAATACAGCCGCGGTGCAGGCAGGTGCCGCCCAGTTTGTCCATTTCGATGACGACAACCGACTTTCCCAGCTGGGCCGCGCGGATCGCCGCCACATAACCTCCGGTTCCACCGCCCAGTATTGCCACGTCACAGGATATTGTCATGATATGTATCCTCCAGTCATTACTCATAAGTTCTGCATAACCTATTACATTGTACTCTCTTTTATGCCCATTACAAACTTATAATCGTCATGTATTCATGGACTTTTTCCTGGTGAAGCGTTATCATATGGGGGAATCCAAAGGGCTGCGAAGGAGATGGAACCCTCATGAAACTGCTGATTTCACGCTTCATTGCCATCCTTATTCTGGTTATTCCCGGCCTGCTGGCCATGACGGGCTTCCTGATGATGAAAGATGATATTTTCAACTATATCTCCATGCATGGCGACGATGCTGTGACACCGGATTTTGCCTGGCTGCATTTTGGCGGGGGGCTGCTGCTCTTCTTGGCCGGGATGAGCTTTCTCGGAGGCTGGATTCTGACGCGTGACCGTAAAAAGAACTATGTCGGCCCGCGGTTCAGAGAGAAGCAAAAAATCCAGCAGCCGCCTGCTACGAAAAGTAATCCTTAACTTTTAATAACTTAGATCACTTAACCAGGCATTTCCGAAGACATTCGGAGATGCCTTTTTTTTTGATTCTATGAATCCCTTAGGAAATAAGGTATATTTTCCCTGTAACTTATTTTAATCAGGGAGTGGTATGTCTTGCTGCATCAACAACAGACCCCGGCACTGGACAGCAATGCGATTATCGTATCCGGCGCAGGCAAAACATTAAATCAGACAAAGATCATCCGCAGCGTTTCTTTCGCTGTGCCTCATAACAGCATTTTTGCCATCATCGGCCCGAACGGAGCGGGCAAAACAACCCTGCTGCGTCTCATCATGGGTCTCTTGACACTGGATGAAGGAACGATTACTTATTCCAGTGATCTGCGGAAAATCTCGGTATTGCTGGAGAATGATTACTTATTCGAGACCAAAACCGGGCGTGAAAACATCCGTGATTTCTGCATCTATTTGGACGTAAGTCCGGCGTCGGCTTCTACGATGATCGAACGATATGCTGCTCTTCTGCAGCTCGAAACCGCACTTGATAATAAAGTGGCTTCCTATTCCAAAGGCATGAAACGAAAGCTGTCGCTGCTGATTACGCTGCTGAAGGATTCCCCCATTCTGCTGCTGGACGAGCCTACCTCCGGTGTCGATCCCGAATCAAGACTGGTCATGCGCAGCGTCCTGCGCGGTTTGAAGGATGAAGGCAAAACACTTATCCTTACCTCTCACGATCTGGCGGAGGTTCAAAAAATCAGCGATTGGATCACCATCCTGATCGGCGGTTCCATTGTTGATATTATCCATAATCAAGAATTCTGCGGTGATTTGGAGCAACGGTTCTTCACTGTACTTAAGGAGGCTAGATAATGAGGCTGCATCCGGTGAACAAATTGAATATCAGGGATGTCCTGAGAACCCCCTCGTATATTGCCATGCTCCTGATCGTGATGATCTTGCCGTTTAACTCCCTGCTGCAAATTCTGAGAACCAGCACCGGCCCGTTGGCATTTATCGCGGTCTATATTTACCTTATCCTCAACATCTCGATCTATCTCTTTCTTAATATGCTTGCCCTCAGTCTAATAGTTATTTCCGAAAAAACCTCGGGGCGCTGCGAATATTATCTTGCCAACAAGGTCGATATCCGCCGGCTAACGTCTTTATACAGCCGCTCCGCCTTTGTGCTAAGCATTGCTCCTGTCCTGCTTTTTAATGCCCTCGTGTTCGGATATGCCCTGGCTGCCCGGGAAGCGGTGCTTCTCCATCTGTTCCGGAATGTTGCTTTTGTGATGTTTGCTGCGGCTTATCTCCTGTTTACCTATGCCGCCACCGGAACATTGACGCTGATCTCCATGCTCTCCAAGTCCCCCGAGCGGGTAAGGACTTTCCTTTCGGTCAGTGCCGTTCTGTTTGTGTTTGCCGCCTCACTGCCCGGCACATTTATCCGCAAGCTCGGGATTACACCGGATGGTAACGCCATCCTTTGGATTACCGGCTGCATGCTGCTTCTCCTGGCTGCACTCTGCACCGCTGTGCGCTCCTCTCTAAACGGGAAGCTGAGCAATGAGAGCATTATATTATCCTACAAACAGTAGCTCCATTTTTCGGGAAGGGCAAAAAAAGCAGCAAGCCCGCCGCCCCAGTTCCACTGCCTGCCGGGATGGCGTATCTTGCTGCTTCTAGTTAGTCGTTCTGATTCTGGACTGTCCCCTTACATCGCTGCCTCATCCTTGGCACCCCGAACCAGTTCGCTGTACAGTCCGCCTTGCTGCAGCAGTTCGTCATGTGTGCCCTGCTGCAGCAAACGTCCGCCCTGCAATACCAGGATACGGTCCGCCGCGCGGATGGTGCCCAGTCTGTGGGCGATCACGAAGCTTGTCCGGCCTTTCATCAGCGCCTGCAGCCCTTCCTGAATCTTGATTTCAGTCACCGTATCAATGCTGCTGGTCGCCTCATCCAGCACCAGCATGGAAGGATTGGCGAGAATCGCTCTTGCGATCGCCAGCAGCTGCTTTTGCCCCTGGCTAATCCCGCTGCCGTCCACGGAGAGCATCCGCTCGTAGCCGCCGCGCATCCGCATGATGAAGGAATGGGCATTCGCCAGCTTCGCCGCCTGCTCCACTTCCTCGTCCGTAGCGTCCAGCCTGCCGTAGCGGATATTGTCGCGGATTGTGCCTTTGAACAAGAAGGAATCCTGCAGCACAAAAGCCATCTGGCTGCGCAGACTTTCCCTGCGGATGGACGAAAGATCCATGCCGTCCAGCGTAATGCTTCCTTTGCTCGGATCATAGAACCGCGATAAGAGGCCTATCAGTGTTGTCTTGCCGGCCCCTGTAGGTCCGACGAGGGCGATCATCTCGCCCGGCTTCGCTTCAAAGCTGATATTCTGCAATGTATCGGCGCCGCCGTCATAAGAGAAAGAGACGTCCTTGAACGTCACCGCCCCCTCCACCTGTTCCAGCGATACGGCCGCGCCTTCATCCTTGGCTTCAGTCTCTTCGTCCATAACCTCAAACACCCGCTCCGCCCCGGCAATCGCCGACAGCAGTGTGTTCCACTGGTTCGCCAGATCATTAAGCGGCCGCGTAAATTGACGTGTATACTCCACAAAGGCGATGATGACACCGACAGTGACCAGGCCGCGGATCGCCAGCAGGCCGCCCACACCGGCAACAATGGCAAAGCTCAGATTGTTCAGGCCATTCATCAGCTTGGGAATAAAGCCGGAAATCGACTGCGCCCAATACCCCGACAGCATAATCCGCGTATTGCGTTCACGGAAACCGGAAATGACCCGTTCCTCCTGCGAGAACGCCTTGATAATCCGCTGTCCCGACAATGTCTCTTCTATATAGCCGTTGAGCTCGCCCATGCTGCGCTGCCGCTCCTTGAACAGCGGACCGGTTCGCCGCGTTATCCAGCGCATCCCCAGCGTCATCAGCGGCACTACAATAAACGTCAGCAGCGTAAGCAGCGGGCTGAGCCATAGCATGACACCCACGGTGCCCAGCAGCGTGAGGACACTGGAGAAAATCTGGATCGCCGAGCTGTTCAGGGTGGAGCTGATATTCTCGATGTCATTGGTCAGGCGGCTCATAATTTCGCCCTGCTGCCTGCGGTTGAAGAAGGAAATCGGCAAACGGTGCAGGTGCGCGAACAAATCGGTGCGTATCCGGTAGATTGTCTCCTGGGCAATTTCGATCATCCAAATATTTTGCAGCCAGGAAGTTAATGAATTGAGCACATATACAAGTGCAAGGGTAATGAGGAAGGTCCCCCAGGTTCTGCCCCCCGATCCCTCTAAGTAATGATCGACCGCCCGGCTGATCAGATAAGGTCCAAGCAGCGCCAGACCGGAGCTGAACAGCACCATCAGAAGCACGAGGAACAGCTTGGCTTTGCGCTCGGCAAGATAACTCCAGATCCGTTTCAGCGTAGCCGACCAATTTTTCGCTTTCGCTTGGGGCTTGCGGTTCGAGGCCGCCCCGAAGCTTCTACCCTCTCCAAGTCCCAGATCCAGCTTCGGATGCTTGAAAGGTTCAATTAATGCTTTGAACATGATGCACCGCCTCCTTGCCCTGGGATTCATAAATTTTCCGGTAGAGGGAAGAGCCGGTCATAAGCTCTCCATGGGTACCTTTGGCGATTAACCGGCCTTCATCCAGCAGCAGGATCAGGTCTGCCGATACCGTGGAGCTGATCTTCTGGGTAATAAGAAAGGTTGTGCAGGACATATGCTTCAGTTCCTCCAGCAAAAGACCTTCCGTTACTGCATCTAGCGCACTGGTGCTGTCATCCAGAATGAGTATCGCCGGCTTTCGCACAATCGCCCGGGCGATAGTCAGCCGCTGCTTTTGCCCGCCGGACAGATTGACCCCCCGCTGCCCCAGCATGGTGTCATAGCCTTGAGGAAGACCTCTCACCGTTTCGTGGATTTGCGCCGCAGCAGCTGCCCGCTCGATCTCTTCCCGGGTTGCGTGCTCATTCCCCCAGGCAATATTGTCACGTACCGAGCCGGTGAAGAGCAGTACCTCCTGTGGCACATAACCAATCGCTCCCCTCAGCTTGGCAATATCCAGCTCCGAGCTGTCCACACCGTCAATTGAGATCACCCCATGGTTCTGCTCATATAACCGGGGAATCAGTCCGACCAATGAGGATTTCCCGGAGCCGGTTGCCCCCATAATCGCCACCCGTTCTCCAGATTTCACCTTAAAGGAGATCTCTTCCAGGACTGCGATCTCGCTCCCCGGATAACTGAAGCTGACATTCTCAAATTCAACCTCACCCTGTATAGCATCCGGTCCGGTATAGTCACTGCGTCCAGAAACACCACGCTTACGCTCATTGGTCTGTACGGCTTGCTCCGCCATTACATCCGGAACTGCATCTGCCGACATCACTTCCGCCACCCGCTGCGAAGAAGCAATTGCACGCGAGAACGTCGCCATGATCGAGGACAAGGCTGACATAGCACCTATCGTGCGCAACGAGTAGTTAATGACCGCCACGGTCTGTCCCAGGGTTGCTTCCCCTGCAGAAATCTCAATCCTTCCAAACCATAAAACCGCCATAATCCCCGCGTTGACGATCAGCATAATCAGCGGAGCTGTTGTTTCTGTCAATCGGAGTGCAGCTACAGTCGACTTCATCAGCTCTCCGCTGAATGAAGCGAACCGGCCAATCTCGTGGCCCATACGGACAAACACACGAATTAAACGGATGCCGGTCAGATTCTCCTGAATAACGCCGTTTACCCCATCCAGCCGGACTTGCACGCTGCGAAACAAACCTGATGACCTGCGTATCACCCACGCCAGGAACAGAATCAGCACCGGCAATGTCACCGTCAGCAGCAGCCCCAGCTTCACATGCACGACCAAAGCCATGACCACACTGCCCAAGACAACAAGCGGCACCCGGGTCATAAACCGCAGCCCCATAAATATTGTATCCTGCAGTTGGGTCACATCTCCGGTAAGACGCGTAATCAGCGACGAGGTCGGAAAACGGCTGAACACTTCATAGGTGAAGGACTGCACCTTCCCGTACAGCTTGTCCCTGAGATCAAAAGCAAATCCCTGACTGGCATGAGACGCAAAAAAAGAGCTGAGCACACCCGCCGCAAACGCTATAATCGCGCTTACTGCAAGTACACCGCCCCACAGCCAGACTACTGAATTATCCTTCTCCCTGATCCCATTATCGATAATTTTGGAGATCAGCAAAGGCTGCGACAGTTCCACCGAAAGCTCGATAAGCATCATTACCAGGGCAGCGATCGCCGCCACCCGGTATCTTTTGAGATAAGAAAAAATTAAGTTCATCGACGTTACCCCATTTGTTTATTCGTAGAGCGCATCCCGCAGGCGGGTGGACATTGCCGAACCCTGTCCCGTCTTAAGAATCACCCGCCGCAGCGCCTTGTTGCTCCGGTTCATTTCTGCTAATTCATCAAGCATTTCCGTCAATAAACTTTGCGTTTCCGGGGACAGTTCCCCGCTCTCCTGAAGTGCTGCCATTCTCTCTTTATAATGCTCCATTTTCTCCGTCAACTGCCAAACTTCCTTTCTGTCAAGGCTTCTCCTGTGGAAGTCCATAATTGCGTATATTATAACATATCACCAGGGAAGCACACTTTAAAGCGGTTGCTGAAATTTAAAAACACGATGGCAATGATTTCACTGGCAAGTTCAGCCACGAGTATGATACTCTAATAATATCGTAGGAGTTTTGTAACATCTTCATGTCTGTATCATCACATCCCGGTATAACGTAGTTATTTCGGCATTTCCAAGGAATTCGTCTAATTTTGATTTGTAACATCTTCACGTTTATATCATGGCGTATCCGTTTATTTTGTTACCCAAGATGTTACCCGAGTGACTTATTGTCCACAATGTGGATAACTACTGTATAAAGATATAGAAGAAGGCCCCCCAACAAAGGAGGGCCTTTCGTCATTACTTAGTGTTACCCGGGTTATTTTTTCCAAGTTCAAAGATACCGGTTGATGATAACCCCGCAAATGCTCCGGCCCATAACCGCGGCACCACTTCCAAATCAGTAAACGGGTAAGCTGCCCATCCTGCCAAAATACCAATGACTAGACCGATAATAGGGATAAAGTTTTTAGGAATGCTCACCATTGCTTTTACAGTTTGCAACACTGCAAAAACAGCAGCTGCGAGCACAGAAGCAAAGACCATCACTTGATTCAGCATATCATTCATTTGTCACACTCTCCTTTGGGTAAATTAGTACGCGCTTGGTGTTAACCGCGTCAGGCTCCAGGAACACGCCTTTAACCACTCCCAGAGATTGCAGGTCAATCGACTTGATGTAACTCTTAGTATTAATAAGCTTGGTCTCTACAGGCGCACCATTGATGTAGATGGCTTTCTTTTGGTACAGCCATGTTATACCAAGCTCCGTCAGCACATCACGCGCCGGGACCCAGCTCCGGCCGGGACTAAGTAGCCCATCAAATTGTTTTTCTCCTATATATACAGCTACAGGAGTCATTCCGTCTGGTAGCGTAATTGCTGGGGTAACTTCTATATATGTGCGTCCAAAGTACTGACACAGGCCCCGGGCAATCTCTTCGGCGCATTCAGACCGGTACGCATCAGATTTCAGCAACATCGCTTCGTCTGGATTGTCCATAAACGCGCCCTCGATTAGCACGGATGGCATCTGTGATTCCCGGGTAATGTGCAAGTTTGCTGTCTTCAGGCCCCGGTTGATCAGCGGCGTACCCTTTACCAGATACTCCTGTATGTCCTGTGCGAGCTTTTTGCCCTCTTTGTATTTGTCCCGGTAAAATATTTCAATCCCTTTAGCCTTAGGGTTCCATGTGCTTCCCATGGCGTTTGCGTGGACAGAGACCATTGCATCTGCCGGGCGACCGAATGTATTAAGGATTGTGTTATTAGCCAGTCCGGTGCGTGTCTTCAAGGGAACGTCAGTATCCCCGGCCGAAACATGCAGCACATCGAAAGCATTGCGTTGAAGATGAACAATCAATTTATCCACGACAGCACGGTTAAATTCGTTTTCCCGCATATATGTGCCGTCTTCAAACATCGGCGTGCGCTTGCCATTCGTTTCCATGCCGTGGCCGTCATCTACTGCTATCAGTATTTTTGTCATTGGGTACCGCCTTTCCTGGTCTGTAACCGGCTGTGATAATGTCGATGATGTAGTTAAGTTCCTCGGATCCGACTTCTCGGATAACGTCGAACGCCCATACTCTCTTACGGGGATGTACGGTTCTCCGCCAAGCTTTACGATCTGCTTTCCCACATATTTTCGCCACTCTTCACTTTCCTCCTTAAACAGTGGGAAGTGGTCGGATAAGAATTTACGAAACATCTTCATTCCCGACCGTTTTCCAACCAAGTAGAACAAAAAAAAGAGCAGCGCTTCCCAGCTTAGCTCCCTCGCGTTCTTTAATATGAAATAAAGCAACTCATACAGCGACTCTATGGCTCCCCACATCTATGCTCACCACCGGTGGATCAAGTATTTGCGCCATTTCTTCGCCATAGAGGTACGTGATCCAGTCCAGCGCCCACACGTTTAGGCCATCTTGAAATTCTGTTTCGTCGTAGTCAATTAGGTTATCCATCACTTTTGATCCTTCATTTTCAGGGTTAAGCGCTGAATCATTTCGTTTCTGCGCTTGATTAATGGCTCGATTTTCAATTGCTTTTGTTTTGAATTTAATGGGCCACGCTCAATTGCTTTAATTGTTTTGTTGATGTCGCTCACTGCCTCAGAAACATCATTTATGCTCTTCAGTTGTCCTTGCTTCGTGAAAGGCTTCTTGTTAAGCTTTGCAGATGCCTTTTCCTTGGTGAGCTCTTCTTTTTTCTGATAGAACTTATCCATTGCTTTTCCGCCTTGGTTGGGATCAACAAGGAACGAACGGGTAAATGGTGCCTGTTCAATTGACTTGGCTGGCTTTGCTGTCCTCTCAAATGCCCCTGTCTTGTCTAGGATAAAGTCCACTGCATCAGATGCATATTTACCAAGGCCTGCAGTCAATCCCTGCAGTGTATTGTCGATCACTCGCGGTGAACTGAAGTTCTTGAATGTACCTTTACCACCAGTAAGCTTCTCTACGCCACCCGCAATGATCCTAGCAGATGTCGTAGTGCGAACCGGGTCATACTGGTCAGAGAACTCTAATCCTTGCTCAGAACGTGGAATGATAGGACCTTCTTTAAAGAAAGAATAATTTGAGTATCCTTCATAAAGTGGGAGCAATCCAGAAATTTGTGTTGGCAATGAAGCATCTTTCAATGCTCGCCGTGCAAATCCATCAAACGCTGCAGAGTCCTTGTTAAACACAAAGTCCAGTGCCTTTTCTGGCAGATTAGCAAATACTGCTGCCAAATCAAATGGCTTTGGAATACGAGCCACAGTATCTGTACCCGGAACAGCCAGTAACCAGAAGGAGTCCTTCATCCAATCTGGAGCATTAGCAATAGTATCCTTTTGTGTCTTATTTGCAAACTCGCGGTTAGCGATAAAGATACCTATTGTTGGTGCTGTAACAGAAACAAATCCACGAGACACAACGCCTAAGGGATCATTTTTAATTGCTCTTATAAGTTTTGATTTACCTTGAACATTAGCATTAAAAAATGAAACAACACGGTTTAGAGGCCTCACACTAGCTCCACCACGGGCAAAATCCATCAAATCACGGGACCGGTACGCTGCCTCTTGCTTGCTGGAGCCAGAACGCAGTGCTGCTCGGTACTCCCCGACCTTGGTCGCTGATTCTGTGGTGTCTGAAATGGCTCTCAATAGTCCAATCAGTGACTTACCGTTAACCAAATTTACAAATTTTTTCGAATTCGGCTGCCTCAGAACCGTTTCTAAGGCTTTTTTGTGAAGATTTCTATCCATAGAAAGCGTATTTCCGTAAGCTCCCAGGTTATCAATCCACTCTTTGTACAATGGGCCTTTCGTGATGGTCTGGATCAACCCGGCGCCGAAGTCTGTAATAGGATTGAATCCACTTTCGGAGACAACGAATGCGTTATTGATATCACGGATTGGGTTGCGCAGTGCGAACTCAGGTGTAAGTGTGGCCCCGGCACGCAGCAGGCTGGCAGGCTTAGATAGGATGTTAATCAGCGTGTTGCTGGACTCTTGGTCCAGGTTCATCAGTGCCTTGTATACCTCAGGCTGCACCTCATACCGAACTTCCTTGCCATCTACCTTAACCTTGACTACGTTTTTTTCGCCTACTTGCTCGGCATTGGTGAGTTTGCGGAAGAATGTGCCGTTTCCATCCAGTTCAGCAAGCTTCGGTATCTGCCGGGCCACATTATTGCGTTCGGCAGCATTGACGCTTTGGAAGATGTTCTTCACCATATTTTCCAGCGGAGCAATGACCTTTCGCTCTGACCCTTGCAACGCCTTAATCGGGCTGGTTACGTTGGCGAGAGCACTCGATAACCCGCCGCCTAATCCTACCTTATCGTTATCCATTTCGCGGAACAAAGGGATGTAGTTCTTCCAGCGTTCGCCCAGCACATCATACAGTTCCTTGGATACTACGCCACTGTCCACCAGTTCCTTTAGCATATCGCGGTTAACTTTAACTATTTCTTGCTGAGCTGCTATCATTTCAGGTGATGCCAGTTCATCAATGATTGATTTAATCTCTTGATTTGTATAACCGGATTTATATCCGGCTGCGTTCACGTCCTTAGCATGCATAGCAAGCACGTAATCCTCTAGGTCTTCGGATGTTTTCCCTATGGCCTCTACTCTCCGAATGACAGGACCCAGTCTGTCTTGTATGATGAGGCTAGCACGTTCAGGAGCGCCTTTGAAGAGCCTAGCAGCCTTGTACAAGCTGTCTTCAGCACTGGCTAGTTTTCCCCCACGTACATTCTTTTCAACGGTTTCCAATGCTGCTAGGTCATCTGTGGTTTGTGTCCGCCATTGCTGCCATCTTTCCCCGAAAGGTTTCTTCTTAACTTTAACGTCTCTGCTGATTTTCGTTCTGAATGAAGCAGCATCACCTTCGGTCTTGGTGTTAAATTCAATTGCAGCTTTCCCTTCATCACTCACCAATCGTTCTTGTCGCCGCAATTCCTCCCGGCTCATGCGTAGGATCTTATCTGCATGTGGACGGACAGATTCGCCGAACTCCTTGACCAGTTCCTCTGTGAAGTTTGCCACTTTGATTGTGCTTTTACCGAGCTTGGAAGCCATGATTACCGCATAATCCGCCCACTCTGGCAACGGGCTTGAGTTCAGGTTGCCTTTACGTTTGGCAATGCGTTCTCTGGCCGCCTTCTCAGCATCATCAAGGTACGAGTAAACCTTATCCCGTACATTAGGATGATTGACTGCTTGAATTGCTTCCTCGACCTCCTGCAACTCTGTTTTAACAGGTAATTTCACAGGTTCAGGTGAAGACACTGGTTTAGGCTCCGGCGCTGGAGACGAGTAAAGCACTCTCTCATTCTCCAAGGACGACTTGAGCGCATAGTCTATATCCTCTTGCGTTAATTCAGACGCCGGTTTGTTGATGATCTCACGATCCCTGGCACTTATGTTTTCATCAATTGCTGGTTTTACTTTTTCTGGTGCTGATTTCACAGCCTCCGGCGCCCTAGCAATCATTTCCTGTACCGGTATATCTGTCTCTATATTTGGATTTCTATTGGTAATGGATGATGGTGTTTCTATTGCTGCGCCTTCTGGTATACCGGAATTTCTTGCTGCTCGTACCTCAGCAAACTTTTCAAAACCGGATTTAACCGCGCCTCCCACTGTACCCAGACCTAGACCAAACCCACCACCAATCAAGGCATTTATACCAATTTCCCGGTTACTATCCTGTTGGTTCATTAGCCCAGAGGCAACGTTTTGTACAGTTCCGGCCAATCCTTCTGTGAGTCCTCCACGCACGATATTATTCGCCGTAGATGGGCTAACTTTGGGTATGATCTTGGAGATCGCGTTAGTTGCCTTCATTCCGGCCCCTGTGTTTAAGAGTTTACCTGCGGCTTCATACGGCGCCACGTTTGGACCTGAACCTACAGGTGCACCTGTAGGAGTCAGGAACGGCGTTACAAAGTTGTTTACCGCATCTGCTACTTTATCCACTACTGTATTTCCACTTGAGTCTTTACGGGTAGCGCCTGAGTTACCACTAAAGGCATTACCTATAGCTACCCCAATCGGGTTACCCTCCATGAGATAGTTCATGGCTTGCGCGTACTGTTTTACCACAGGCGGTGCGGATGCGATTTCCTTTTTATTAATCTCGTACTGTGATATGCCCGGTATCTGCGAAGCATTTGCCGGACCGCCACCAGTTTGATTCAGCAGGCTTGCGGCTGGCAAACGTCCCTGCAGTTGAGTCTGCAGAGATGTCACCGGTATGTTAAGCGCCGAGGCTGCTGGAAGCTTGCCCTGAAATGCTGCTATCTGTTTGCTTTTTAACTGTTCTGCTTTGAAATCAATTGGTTGGGTTTTAACCGGCTGCGGCGTAGTGTCGAATCCCTGCACCTGAGGACCCTTGCCAACACTGGATAAGGTACTGCTGAGCAGTGCTTTAGATCGGGCATTGTTTTCAGCGGTTGTATCAACAATTTCCCGATTGCGTACAGCAGCAAATGAACTTTCTCGCTGTTCATCTTTTGGCGAGTAAGTACGATTTAGCACACGCTGCTTCGCCTCTTCGCCCCGTTTACGATTACGAACCGCGTCAAATGTTGACAT

Protein sequences of DBSCAN-SWA_7

>NZ_CP009241|5359515:5373155|5369027_5373155_-|WP_038594773.1|DBSCAN-SWA
MSTFDAVRNRKRGEEAKQRVLNRTYSPKDEQRESSFAAVRNREIVDTTAENNARSKALLSSTLSSVGKGPQVQGFDTTPQPVKTQPIDFKAEQLKSKQIAAFQGKLPAASALNIPVTSLQTQLQGRLPAASLLNQTGGGPANASQIPGISQYEINKKEIASAPPVVKQYAQAMNYLMEGNPIGVAIGNAFSGNSGATRKDSSGNTVVDKVADAVNNFVTPFLTPTGAPVGSGPNVAPYEAAGKLLNTGAGMKATNAISKIIPKVSPSTANNIVRGGLTEGLAGTVQNVASGLMNQQDSNREIGINALIGGGFGLGLGTVGGAVKSGFEKFAEVRAARNSGIPEGAAIETPSSITNRNPNIETDIPVQEMIARAPEAVKSAPEKVKPAIDENISARDREIINKPASELTQEDIDYALKSSLENERVLYSSPAPEPKPVSSPEPVKLPVKTELQEVEEAIQAVNHPNVRDKVYSYLDDAEKAARERIAKRKGNLNSSPLPEWADYAVIMASKLGKSTIKVANFTEELVKEFGESVRPHADKILRMSREELRRQERLVSDEGKAAIEFNTKTEGDAASFRTKISRDVKVKKKPFGERWQQWRTQTTDDLAALETVEKNVRGGKLASAEDSLYKAARLFKGAPERASLIIQDRLGPVIRRVEAIGKTSEDLEDYVLAMHAKDVNAAGYKSGYTNQEIKSIIDELASPEMIAAQQEIVKVNRDMLKELVDSGVVSKELYDVLGERWKNYIPLFREMDNDKVGLGGGLSSALANVTSPIKALQGSERKVIAPLENMVKNIFQSVNAAERNNVARQIPKLAELDGNGTFFRKLTNAEQVGEKNVVKVKVDGKEVRYEVQPEVYKALMNLDQESSNTLINILSKPASLLRAGATLTPEFALRNPIRDINNAFVVSESGFNPITDFGAGLIQTITKGPLYKEWIDNLGAYGNTLSMDRNLHKKALETVLRQPNSKKFVNLVNGKSLIGLLRAISDTTESATKVGEYRAALRSGSSKQEAAYRSRDLMDFARGGASVRPLNRVVSFFNANVQGKSKLIRAIKNDPLGVVSRGFVSVTAPTIGIFIANREFANKTQKDTIANAPDWMKDSFWLLAVPGTDTVARIPKPFDLAAVFANLPEKALDFVFNKDSAAFDGFARRALKDASLPTQISGLLPLYEGYSNYSFFKEGPIIPRSEQGLEFSDQYDPVRTTTSARIIAGGVEKLTGGKGTFKNFSSPRVIDNTLQGLTAGLGKYASDAVDFILDKTGAFERTAKPAKSIEQAPFTRSFLVDPNQGGKAMDKFYQKKEELTKEKASAKLNKKPFTKQGQLKSINDVSEAVSDINKTIKAIERGPLNSKQKQLKIEPLIKRRNEMIQRLTLKMKDQK
>NZ_CP009241|5359515:5373155|5361104_5361410_+|WP_038594760.1|DBSCAN-SWA
MKLLISRFIAILILVIPGLLAMTGFLMMKDDIFNYISMHGDDAVTPDFAWLHFGGGLLLFLAGMSFLGGWILTRDRKKNYVGPRFREKQKIQQPPATKSNP
>NZ_CP009241|5359515:5373155|5363109_5364957_-|WP_038594764.1|DBSCAN-SWA
MFKALIEPFKHPKLDLGLGEGRSFGAASNRKPQAKAKNWSATLKRIWSYLAERKAKLFLVLLMVLFSSGLALLGPYLISRAVDHYLEGSGGRTWGTFLITLALVYVLNSLTSWLQNIWMIEIAQETIYRIRTDLFAHLHRLPISFFNRRQQGEIMSRLTNDIENISSTLNSSAIQIFSSVLTLLGTVGVMLWLSPLLTLLTFIVVPLMTLGMRWITRRTGPLFKERQRSMGELNGYIEETLSGQRIIKAFSQEERVISGFRERNTRIMLSGYWAQSISGFIPKLMNGLNNLSFAIVAGVGGLLAIRGLVTVGVIIAFVEYTRQFTRPLNDLANQWNTLLSAIAGAERVFEVMDEETEAKDEGAAVSLEQVEGAVTFKDVSFSYDGGADTLQNISFEAKPGEMIALVGPTGAGKTTLIGLLSRFYDPSKGSITLDGMDLSSIRRESLRSQMAFVLQDSFLFKGTIRDNIRYGRLDATDEEVEQAAKLANAHSFIMRMRGGYERMLSVDGSGISQGQKQLLAIARAILANPSMLVLDEATSSIDTVTEIKIQEGLQALMKGRTSFVIAHRLGTIRAADRILVLQGGRLLQQGTHDELLQQGGLYSELVRGAKDEAAM
>NZ_CP009241|5359515:5373155|5367623_5368898_-|WP_052092212.1|DBSCAN-SWA
MWGAIESLYELLYFILKNARELSWEALLFFLFYLVGKRSGMKMFRKFLSDHFPLFKEESEEWRKYVGKQIVKLGGEPYIPVREYGRSTLSEKSDPRNLTTSSTLSQPVTDQERRYPMTKILIAVDDGHGMETNGKRTPMFEDGTYMRENEFNRAVVDKLIVHLQRNAFDVLHVSAGDTDVPLKTRTGLANNTILNTFGRPADAMVSVHANAMGSTWNPKAKGIEIFYRDKYKEGKKLAQDIQEYLVKGTPLINRGLKTANLHITRESQMPSVLIEGAFMDNPDEAMLLKSDAYRSECAEEIARGLCQYFGRTYIEVTPAITLPDGMTPVAVYIGEKQFDGLLSPGRSWVPARDVLTELGITWLYQKKAIYINGAPVETKLINTKSYIKSIDLQSLGVVKGVFLEPDAVNTKRVLIYPKESVTNE
>NZ_CP009241|5359515:5373155|5362264_5362993_+|WP_038594762.1|DBSCAN-SWA
MRLHPVNKLNIRDVLRTPSYIAMLLIVMILPFNSLLQILRTSTGPLAFIAVYIYLILNISIYLFLNMLALSLIVISEKTSGRCEYYLANKVDIRRLTSLYSRSAFVLSIAPVLLFNALVFGYALAAREAVLLHLFRNVAFVMFAAAYLLFTYAATGTLTLISMLSKSPERVRTFLSVSAVLFVFAASLPGTFIRKLGITPDGNAILWITGCMLLLLAALCTAVRSSLNGKLSNESIILSYKQ
>NZ_CP009241|5359515:5373155|5364937_5366725_-|WP_038594766.1|DBSCAN-SWA
MNLIFSYLKRYRVAAIAALVMMLIELSVELSQPLLISKIIDNGIREKDNSVVWLWGGVLAVSAIIAFAAGVLSSFFASHASQGFAFDLRDKLYGKVQSFTYEVFSRFPTSSLITRLTGDVTQLQDTIFMGLRFMTRVPLVVLGSVVMALVVHVKLGLLLTVTLPVLILFLAWVIRRSSGLFRSVQVRLDGVNGVIQENLTGIRLIRVFVRMGHEIGRFASFSGELMKSTVAALRLTETTAPLIMLIVNAGIMAVLWFGRIEISAGEATLGQTVAVINYSLRTIGAMSALSSIMATFSRAIASSQRVAEVMSADAVPDVMAEQAVQTNERKRGVSGRSDYTGPDAIQGEVEFENVSFSYPGSEIAVLEEISFKVKSGERVAIMGATGSGKSSLVGLIPRLYEQNHGVISIDGVDSSELDIAKLRGAIGYVPQEVLLFTGSVRDNIAWGNEHATREEIERAAAAAQIHETVRGLPQGYDTMLGQRGVNLSGGQKQRLTIARAIVRKPAILILDDSTSALDAVTEGLLLEELKHMSCTTFLITQKISSTVSADLILLLDEGRLIAKGTHGELMTGSSLYRKIYESQGKEAVHHVQSIN
>NZ_CP009241|5359515:5373155|5359515_5360937_-|WP_038594759.1|DBSCAN-SWA
MTISCDVAILGGGTGGYVAAIRAAQLGKSVVVIEMDKLGGTCLHRGCIPSKSLLRSAEVYAEINESESYGIETTGVQLVFPKVQRRKEAVVEQLHEGVQFLMRKNKIQVLKGKGRIIGPSIFSPRSGAVAVELENGEMETVVSSNLIVATGSRPRVLPGLKPDGKVILSSEEALTLEELPSSIIIVGGGVIGVEWASMLVDFGVQVTVVEAAGQLLPLEDEEIARELLRLLKKRGVKVLTGTTVDAETCVVTEDGVTIEARKGEQSQSLSAEKLLVSVGRVANIENIGLENTDIHFDKGVIEVNANMQTNEPHIYGIGDCIGGLQLAHAASHEGIRAVNHLAGEKLYPYHIHQVPRCVYTRPEVASVGYTEKEAKNLGHDVVTGKFPFSAIGKAIVYGMKDGFVKVVADRSSGDILGVQMIGPHVTDLIGEAALAQLLDATPWEIGEAIHAHPTLSEIIGEAMLAVDGKSIGF
>NZ_CP009241|5359515:5373155|5361521_5362265_+|WP_081965893.1|DBSCAN-SWA
MLIREWYVLLHQQQTPALDSNAIIVSGAGKTLNQTKIIRSVSFAVPHNSIFAIIGPNGAGKTTLLRLIMGLLTLDEGTITYSSDLRKISVLLENDYLFETKTGRENIRDFCIYLDVSPASASTMIERYAALLQLETALDNKVASYSKGMKRKLSLLITLLKDSPILLLDEPTSGVDPESRLVMRSVLRGLKDEGKTLILTSHDLAEVQKISDWITILIGGSIVDIIHNQEFCGDLEQRFFTVLKEAR
>NZ_CP009241|5359515:5373155|5366743_5366953_-|WP_038594769.1|DBSCAN-SWA
MTEKMEHYKERMAALQESGELSPETQSLLTEMLDELAEMNRSNKALRRVILKTGQGSAMSTRLRDALYE
>NZ_CP009241|5359515:5373155|5367361_5367619_-|WP_156131029.1|holin|DBSCAN-SWA
MNQVMVFASVLAAAVFAVLQTVKAMVSIPKNFIPIIGLVIGILAGWAAYPFTDLEVVPRLWAGAFAGLSSTGIFELGKNNPGNTK

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038594759.1|5359515_5360937_-	dihydrolipoyl dehydrogenase	A0A2K5B2C5	Erysipelothrix_phage	1.3e-43	28.9
WP_038594760.1|5361104_5361410_+	DUF2627 domain-containing protein	NA	NA	NA	NA
WP_081965893.1|5361521_5362265_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.0e-25	28.5
WP_038594762.1|5362264_5362993_+	hypothetical protein	NA	NA	NA	NA
WP_038594764.1|5363109_5364957_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	7.8e-57	30.0
WP_038594766.1|5364937_5366725_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	1.6e-46	29.3
WP_038594769.1|5366743_5366953_-	hypothetical protein	NA	NA	NA	NA
WP_156131029.1|5367361_5367619_-|holin	holin	A0A0U4JE55	Bacillus_phage	1.7e-15	45.9
WP_052092212.1|5367623_5368898_-	N-acetylmuramoyl-L-alanine amidase	D6QWP3	uncultured_phage	1.2e-24	40.5
WP_038594773.1|5369027_5373155_-	hypothetical protein	A0A0A0RPU4	Bacillus_phage	7.3e-196	44.0

Sequences of DBSCAN-SWA_8

Nucleotide sequences of DBSCAN-SWA_8

>NZ_CP009241|5393397:5397682|DBSCAN-SWA
TTCATGCGCTGACCTCCCAAATTGATATTTCAATTCTTGGCTTTGCACTGTACCTCTTTTTTACTGTGGCCTCGACTACTTGACTATCATCCACCCACATGATGTTTGTGAGCGCGTCTGTGATCCCCTTCAGGTAATTGTCTGCATCAGGCTTGGTGAGTGGTAGGATCTCTCCTTTCTCGGCTGCAGCGGCCTTTTTAAGCGATTTGCGAATGACTGATGTTAGTGGACGGTAAGCAATCACTTCAAGCCCTAGCGCCCCTTGTAGAGGATGTGGCGGTGCGTATTCCCGGGAGGCTAGTCTCACATAATCTTTGTAGTGTTTGGACTTGGCTGGATCGTACATTTTTACAAAGCCTGTGGCTGTAGTTGCCCGGGGTCTGCCTTGAGCGACAGGAGCCCCGTATACCGTGAATTTGATCATGCGCCCTTCTTACCTTTCTTGCCGCTGAGGTAGTGACTCTTGTTCTGCTTGAGTGGCATCTTTGGTGGTCCGTACTTGGCTATCATGTCGGTGTACTCTTGGGGTGTCATTTGCCGGGTGATACATTCACTATGGCATGTGGCGCGGTTCGGTGGTGGAAAGCTGGATACTACTGGCATAGGGGTGATACGGCGATGTCTTTTTACGCCACTACTCATTTTTGATTACCTCCCATTCCGTATCTTCTCTCATATTCACTTCGTGTCATCACTAGCTTAATGGTTGTGCTTTCAGGTAGATTGTGAGGATCTATATCGCTGTCTGGCTGTACTGGTGTGGGGTCAGCCGCTTTTGCCCTCAGTTCCTTTACTTCAGAAACCAGTTCTGTAAGCCAAGTGTACGAATTATCACGAATCATTTTCAGATATCTACCTGACTCCATACGATTTACCGACCAAGTTTTTGTGAGCGTCTTTTCAATAATTTCAATTTCTTGATCCGACAGTTTAGGCATTGTCTGTTTCCTCCCCTGGTAGGTTGATGTGGGCATAGTGGGTGATTCTATCGGCTATATATCCATTTGGCGTGTACCACATGAACCTTCCAGCATCTACTTCATCAAGTTCCGCACTTGCTAATTTACCGTTTCCATACACCAAGTAAACCTTGTTGCGTTCTGGTTCGTTCTCAGGGTACTTTATCCAATTGATCATGTGGGTTGTTCCTTTCTTTATGGGGAGCCAGATTATGTAAACCTTATCCGGCCCCCGCTGCGCTGGGATTATTCGGTCTGATTCGATGGTCTTCGGCCAAGGAGTTAATTCCGCATCAATAGCGCCATGTCGTACCCGGATTCGATGAATTGGATACTCAGCTTCCGGTTTACATCGTTCCCCAGCCGGTCATAGATTTCGTACATTTCATCTTTAGTGAATTTAGTACCCATCACCTCATTGAAACTTCTCAGAACCCGCGGTGCCCAGTATTTGTTTAAACCCTTAGCTATCGGACGGGAAACCCAAGCAAACATCTTACATTTGAAATCAAGCTCTGTACTTAATCCATCCAGCCTGAAGTACACATTATTTCTTGGTTCAAGGATGATTTCGTTATTGCGGTTTATGAAGGCCTTTGGAAATGCGTGGAGCGCTTGATTGATAATGTTGCTCAATGACGCCTGATCCGATAATTGATAGCTTGCTGTGCTCATATCCTCTTCTCCCCCTTATACCTCTATTAGTTCTGGATTCTCGTAGATGTTGCCGATGACTTCAGCCTTATATCCCCGCACATCATATCCAGTCCAACCGCCATTCCCGGCATTTATGCGATATGTTTCTGGAGGAACTGCCTTGTATCTTCCTTGATTGCTGTCGTAGCAGATAATGAACTTTCTTGGTGTGTCGTCGATATATTCATCATCTGAGTGGTCATTCGGGTTGACGTTAGAGAAATAGTCCTCTAAAACAATATCCCCTTCGTAGATCTCCCGGCCGTTCTTGTCCTTTAATCCGGTGTATTGCATGAGCTCCACATCTTTCCCATGAATATAGTGACCGGATGATGACCAATTGGCGTTCTCACCATCGAATGGCTTCCTCCATACATGAACGTTTTCTTTTTTGCTGTCTTCCAGTTCTCCGCCTAACTCATAATCAATTTGTGAAGGAACAAACATTCTTTTGAAACTCTTATCCCACGCCCGGAACTTAATCTCTCTGCCCATCGTGTATCCTCTCCCTTTGGGGTCTGCCCCCTAAAATTCAACTCTTCCAAACGCTATATCAATATTCAACTTGCTTCTCCGTTTATCATGGTCCTTCTGGATCATGGCGTGTAGCTTATTGCAGGACGGGCAAAACTCAAACCCTGCTACATTCGTGGCACACTCTTTACAAATGCCGTTGTCGCAGGTTTCGTGGTGTCCGCCTATCATATGCCCCCTTTGATCTTTTGCTGAGGTCCATAGGTAGCCAACTACAAAATCACATAGTTGAGTGGCTTCATTCCTGCGGCAAAAGGTGCAAGGGTATTTTGGCATTTTTGCGACATTGCCCATGTCTCTGCCCCCTTATAAGTTAAGTACCGCTAGTAATGCAGCCTTACCGATGGCTTCAGGTGCTGAACCACCATACACCTTGTAATGCTTTTGGGATTCAGGATCATCAGGTGAAAAAATGCAAACCCATTGTTCATTTTCTTCACGTTTGTCTGACCAAAAAAGATCGAATGTGTATTTTTTCATGCCTTTCAATATGTTCCATGCTGCGGATATATCTTTTGACCAACCACGATTTACAAAGTAGGTGAACGGTATGACTCCCTTTGGCGGCAAGTACCTGAATGCTTCTTCTTCACTGGTGATGGTCGGTGGAACAAGTACATCATTTGAATCACAAGGTCCGTCATAGTCAAAGTTTGGACCTTTCATTCTCCACCAACCAAATACATGTTCAGCAATTAGTGCGTCCAGTTCCGGTCCCGGAGTGCGGCTTAGTATCTCTTCCCTTGTGAGTGTCATGGCCGATACACCTTCCATTCTCCACTATCCAATTTCTGTTGAGCTTGATCTTGAGTAACTGTTATGTTAGATCCATCAGCGTAAACAACCAGTATTTTTCCCCAACCTTCACTGTCTACATTGTCATTCCACGAAATCAGCATGCTGCCGAATATCCGACTGGAAACAAATTCGCATCCCTCGATATCCGAAATTTGGAATTCTGGTACTTCTGTCATTGGTTATCTCCTTCCTCAGCCTGCTTCAGAATCTCGCGCTTTAAATCTATCAATTGCTGCCGGACAAGCTTTTTAACATCAACCGAACGCCAGCAGTATTTATTCTCATACACGTTGTCACAAAGAGGTATTTTGATTTCGATGTTAGCCTGCTCATAAGTCCGGTAATTCGCTGTTTGCTTGTTGCAGACGACGCACGGCTTTGATTCGGAGGAACTGCAGAATCCTTGTTTCACGGTTATTCGCCCTCCTTGGGTGCTGGGGCTGCTGGAATCACGATTGGTGTCCAGTGAGTATGATATCCCGGCCAGTCTTCATCCAGTGGGCTACCGCAATACGGTGACTCCTGAATCGGGAACGTCCACCAGAGTGCATCCCCGTAATCCTCATGCCATTCATCTATTGATTTCGCTTCTGTCAGAGGTTTAAATAATTCATCTACAACCCAAGATGGTCCAGATATTTCTCTTTTCATTGTCTTCTTTAACTCTTCGATTAGATCATTCATGATTTTCTCCTTCCTCACTGGTGGGTGCTGGGGTATCTGGGTATAGGGTGGATATCAGAGTGTCAAATCCAAATGACTTAGCAGCAACGTCAGGCACGTACAGCAGTAGGCCATTGTATGCCTCTTTCAGTCGTTGTTCCCGGAACTCCGCTGCATCTGCACGTGCTTTTTGACAGTCAAATTCGCATTTCCAGAAGTCCCGATCTTCCTCCATTGCTACCAGGTTCCAGTCCCTCGGTGTTTGTGTCATTGGGCTTCCTCCCCGACTTTCTCAAATTCAGCCTTCAACTTTTCGTACTCCTGTCTGCGGCGTTCTTCTTGCCCTTTGGCCCATTGCTGCCGGACAACTTCCCGCTGGCGCTCATATTCTTGGATGTCCTCCATTGTCACAACGCCAGCTTTCAACAGTTCACTTCTCAACCAAATGGTTCCAAGAATATAATTGCTTGCTTGATGCTCACTTTTGACGTGGATCTCTCCAGATTCATCTCGGCTCTCAATTATTATGATTCCGCCGTCCGTTGTGGCTATGGTGATGGCTTCGGCAAATTGCGACATGTGAGTGTAGGCAATTGTCTTACCAAGCAGGTCTGCCTGTTTTGTTATAAAGTACAT

Protein sequences of DBSCAN-SWA_8

>NZ_CP009241|5393397:5397682|5397313_5397682_-|WP_038594842.1|DBSCAN-SWA
MYFITKQADLLGKTIAYTHMSQFAEAITIATTDGGIIIIESRDESGEIHVKSEHQASNYILGTIWLRSELLKAGVVTMEDIQEYERQREVVRQQWAKGQEERRRQEYEKLKAEFEKVGEEAQ
>NZ_CP009241|5393397:5397682|5395576_5395879_-|WP_052092214.1|DBSCAN-SWA
MGNVAKMPKYPCTFCRRNEATQLCDFVVGYLWTSAKDQRGHMIGGHHETCDNGICKECATNVAGFEFCPSCNKLHAMIQKDHDKRRSKLNIDIAFGRVEF
>NZ_CP009241|5393397:5397682|5396797_5397067_-|WP_052092215.1|DBSCAN-SWA
MNDLIEELKKTMKREISGPSWVVDELFKPLTEAKSIDEWHEDYGDALWWTFPIQESPYCGSPLDEDWPGYHTHWTPIVIPAAPAPKEGE
>NZ_CP009241|5393397:5397682|5395045_5395546_-|WP_052092213.1|DBSCAN-SWA
MGREIKFRAWDKSFKRMFVPSQIDYELGGELEDSKKENVHVWRKPFDGENANWSSSGHYIHGKDVELMQYTGLKDKNGREIYEGDIVLEDYFSNVNPNDHSDDEYIDDTPRKFIICYDSNQGRYKAVPPETYRINAGNGGWTGYDVRGYKAEVIGNIYENPELIEV
>NZ_CP009241|5393397:5397682|5395891_5396359_-|WP_156130929.1|DBSCAN-SWA
MEGVSAMTLTREEILSRTPGPELDALIAEHVFGWWRMKGPNFDYDGPCDSNDVLVPPTITSEEEAFRYLPPKGVIPFTYFVNRGWSKDISAAWNILKGMKKYTFDLFWSDKREENEQWVCIFSPDDPESQKHYKVYGGSAPEAIGKAALLAVLNL
>NZ_CP009241|5393397:5397682|5394034_5394334_-|WP_038594825.1|DBSCAN-SWA
MPKLSDQEIEIIEKTLTKTWSVNRMESGRYLKMIRDNSYTWLTELVSEVKELRAKAADPTPVQPDSDIDPHNLPESTTIKLVMTRSEYERRYGMGGNQK
>NZ_CP009241|5393397:5397682|5397059_5397317_-|WP_038594839.1|DBSCAN-SWA
MTQTPRDWNLVAMEEDRDFWKCEFDCQKARADAAEFREQRLKEAYNGLLLYVPDVAAKSFGFDTLISTLYPDTPAPTSEEGENHE
>NZ_CP009241|5393397:5397682|5393397_5393820_-|WP_038594822.1|DBSCAN-SWA
MIKFTVYGAPVAQGRPRATTATGFVKMYDPAKSKHYKDYVRLASREYAPPHPLQGALGLEVIAYRPLTSVIRKSLKKAAAAEKGEILPLTKPDADNYLKGITDALTNIMWVDDSQVVEATVKKRYSAKPRIEISIWEVSA
>NZ_CP009241|5393397:5397682|5394326_5394533_-|WP_038594827.1|DBSCAN-SWA
MINWIKYPENEPERNKVYLVYGNGKLASAELDEVDAGRFMWYTPNGYIADRITHYAHINLPGEETDNA
>NZ_CP009241|5393397:5397682|5396337_5396559_-|WP_038594831.1|DBSCAN-SWA
MTEVPEFQISDIEGCEFVSSRIFGSMLISWNDNVDSEGWGKILVVYADGSNITVTQDQAQQKLDSGEWKVYRP
>NZ_CP009241|5393397:5397682|5394637_5394991_-|WP_052092640.1|DBSCAN-SWA
MSNIINQALHAFPKAFINRNNEIILEPRNNVYFRLDGLSTELDFKCKMFAWVSRPIAKGLNKYWAPRVLRSFNEVMGTKFTKDEMYEIYDRLGNDVNRKLSIQFIESGYDMALLMRN
>NZ_CP009241|5393397:5397682|5396555_5396795_-|WP_038594834.1|DBSCAN-SWA
MKQGFCSSSESKPCVVCNKQTANYRTYEQANIEIKIPLCDNVYENKYCWRSVDVKKLVRQQLIDLKREILKQAEEGDNQ

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038594822.1|5393397_5393820_-	RusA family crossover junction endodeoxyribonuclease	S6B1L9	Thermus_phage	2.5e-35	52.9
WP_038594825.1|5394034_5394334_-	hypothetical protein	NA	NA	NA	NA
WP_038594827.1|5394326_5394533_-	hypothetical protein	R9TMH1	Paenibacillus_phage	1.8e-15	57.1
WP_052092640.1|5394637_5394991_-	hypothetical protein	A0A0A7AR03	Bacillus_phage	5.0e-29	53.4
WP_052092213.1|5395045_5395546_-	hypothetical protein	A0A1B1P7W5	Bacillus_phage	1.1e-16	36.6
WP_052092214.1|5395576_5395879_-	hypothetical protein	NA	NA	NA	NA
WP_156130929.1|5395891_5396359_-	hypothetical protein	NA	NA	NA	NA
WP_038594831.1|5396337_5396559_-	hypothetical protein	A0A0K2CNV8	Brevibacillus_phage	1.5e-12	53.1
WP_038594834.1|5396555_5396795_-	hypothetical protein	NA	NA	NA	NA
WP_052092215.1|5396797_5397067_-	hypothetical protein	A0A0C5JZC6	Enterococcus_phage	4.2e-12	55.4
WP_038594839.1|5397059_5397317_-	hypothetical protein	NA	NA	NA	NA
WP_038594842.1|5397313_5397682_-	hypothetical protein	A0A0S2MVH4	Bacillus_phage	3.3e-15	44.8

Sequences of DBSCAN-SWA_9

Nucleotide sequences of DBSCAN-SWA_9

>NZ_CP009241|5401341:5413870|DBSCAN-SWA
TTTAAGCCGGTTCACTCTTGCTTTGTGGTCTGCGATCCGGTCCCAGCATTTCAATTTGTTCTGCCTTGCCGTTTATCCGACTTCCGATCTTCCCGCCGTTCATCGGTAACCGTTCTCTGATGCGACCTAATGCATAGTTGCTGGTCATGATCGTAACCTTGTTGTTCTTCATTCGCTCGTCAATGATGTTGTATAGCATCCCTTCGGCCCAATCCTTGTACTGAGCTGTGAAAATGTCGTCTATCATCAGGATCGGCACGTTGTAGTATCGCTGTAGCACATCAATTTCAGATTCTTCGCTATCTCGGCTGTATGTCGCTTTAATCTCTCCGTACAATTTTGACTCTGTGACGTATATTGCCGGGATCTTCCGGTATGAGAATGCATTTGCCATACACTGCATGAGGTAGGTCTTGCCAGTACCGTAGGCGTTTAAGATAGCTCCCTTTTCCTTAGAAGCTTCTGCTACCCGGGCATCGTCACCGAAGATGTACAGCCATGTGCCAAGCTCCATATGCCTCTTGATGTCACGAACAAATTCTATAGCCACCCCAAACTGTTCGCGGTTCAGATTGTCGACCGTTGCAGTTTTAAAGGTGTATCCTCGCTCTTTTGGGCTGAAGCTCTCGGCTGCGTTGTACTTTTGGAACATCCGGTCCATGTGGCAGCTGCAGTTTTCCACCACGGCCACTTGCATCGGAATCGGGTATCCTTCCGGCTGCTCCCATCGGAATGAGTTTATCGTTCCGGTGTAATCACATTTTGGACATCCTTCAGTCGAAGTTGCTGGCGATCCGCTGAACTTCTTCGGTGGTAAGTCCTGATTCTCGTCCAGGGCTTCCGATGAAGGTTTCAGCGCCTCGGCTCGCAGCCTTTCGACTCGCTTCAGAAACTCCTGCATAGCCGGCTTGATACTTTCCACCGTTCCCGCCTCCCCTGACCAAAGTTAGCTTTCTTTCGTCTTCCTCAACTCTAGTGACCACCCAGTTTAAAATGGCTCGGTAATCGCTGGTGTACTTCTTTCCGGTTGAACCTTTGTAATTGTCTAAGGTTTCAATGATCCGGTTAAGCTTGTCCTGTCCATGGGCTTCAAGGAGTTTGTCGTATTCTTCTTGAGTCATTGAGACGAATTCAGCAAATTTAATTTTAGGTATAATATCTTTTTTCTTTACCTTCTCAACATTCTTATCATTCTTTACATTCTTGTTTGTGTTCACTTGTTGTTCAGTTGTTGTTCGTTTGTTGTTCACTAGGTGTTCATTTTGTTGTTCACTATCTTGGTAATCTATCCATGAAAGTATTGATACTAAGCGGTTTTTATTGCCGTTTTGTTGTTCAATCTGTTGTTCGATTTCGAAGCTTTTTAGTATTCGTTGTACCTTACTTTCTGAAATATTGAATTTCTCAGCGATCACCTTTCTGCCGGTTATAAGTTGCCCGGGCTGAAGGATGATCTTGATCCCTTTGAACACTGTAGGGTACTCCTTATGAGTCGCATTCAGCAGTAAGTAAGTCCATACAGCGATGTGATCACTGTCCTTACAGACGATAGGGTTGTCCAGGATCTTACGATGTAATTTTATCCACCCATCCATATGCCCACCGCCTAAACGGCCTTATTTTGTGCAGCCCGTAATTCATACCAGCGGTTTTGGCAAGATTTCGCTGTCCGGTCAAGTGCTTCCGCTGCCTCGTTGAACCGGTCCAATACCTTTTTCCGGTTGTCTTTGGTCATAATCTCAGTTAGTAGAGCATCTTCATTGCTTGTCCAACTGTGGTAATAGAACCTTGGCATGTTGTTCAACTCCTTATTTCGTTTTCCTTGATCTCACTATATCCTACTTTATCCTACTTAGCAAGATAAATGTTTAGGTTATCGGATAAAATGCTATACTTTTTTTGAGGTGTATTTATATGGTGAGACAAACCAATAAAGAAAAGTTATCAATAACGCTCGACCCGGATGTATTTGAGTTTATAAGTGAAGCAGCCGCTGAGGATGACCGGTCGGTTAGCTCAAAGATCAATATCATCCTCCGCGACTATATGAAAGCTAATAAGAAGGACTAAGCACTCTTTAACTGCTGCAACTCAGCCTCTAACTCCGCAATCTTGCGTCGGGAAAACTCAATCATGTGTTCGTTATAATGTATACCGCCAAAGTCTCCGTATTTGATCGCATCTGGCATATCACTTGCGTAGATTGCGGCGGTGTTTTCCCATACCTCGATTTCGGATTTGATGCGTTCCTCGCGGGTCATACCTGTTCACCTCGCTTATAAACGCGCACTTGTTCAAGTCCACACTTGTTGCATGACATCACGACTAATGTTGAACCGTCTCTATATTCACAATAGTGTTTCTTATCACAAAAGCAGTGAACGTGCTTGATGTTGAATATGGCGTAGATCCACTTCATGCGCTCACCCCTTTCTTCTGCTTCCGCCGCGCCCGTACATCTGCTTCCAGTACATCCGCAATTCGTAGTAGCTTCTTACCTGTGGCACACTTAGTGTTACAATGCTTCTGCAGCCGGTTATAGGATGGGTTGGCCCATTTCTTATCCGTTCGCTTGGGGCATACCTTGCACACAGCTAGGTACTGGTCCAAGTCTTGCAAAGCCTCTTTACGATTCATAAGTTAAGTACCGCAAAAAGTGCAGCCTTACAGATCGCTTCAGGCGCTGTTTTTGAAACAGCCTGCGAGGAAAGACCAAGTTCATCAAAGTCAGCGCCCCACTCTTGTTCATTTGGATAAAACTCCAGCGCCAGACCGTGGGATTCTCGTTTATTGATATGCTCTACTACTTCCCATGCTGCGGATATATCGACTGAAGGAGAAAACACAGCCCATCCAACATGCGTGTTCCCATCTGACCAAAACCAACCGTTTCCTTTGGGCGTTAATTCAACTTTGTGCCATTTCAACACTGTTTCAATTACAATATGATCTAACTTTTTCCCCGGCTCCATCGCCATTATCTCTTCCCTTGTCATTTCCCTTTCGCCTCTTTCAATAGATTTGTAAGTACTGCCGTCTGTTCATTATCCAGACTCCACACGGTTGATAGTTCAGACTGCTTCAGGGAGCGATTCACGCCACGTTGGAGTATTAGTGACAGTTCGATAAACGAAGCGTCCTTGGACTGATTCTGTGCGTCTGGTGATGTGCTGGATAGGAATCGCTTGAACATCAGGCTTCCTCCTTGTACTGAATCCGGTCAAGTTCATCGAACCAGAAGTTTTCTCCGTACTTTTCACGCTGCAGCTCAATGTATTTGTTCAGCACGGACGTTTTTTCGTGAATCATCTTGTGGCAGTAGTTGCAGACGCGCAGCCCGTTTTCTTTAACGCCCCGGCCGGATCTGCTCCGGGGCATGATGTGGTGCGTTTGAGTACCGCGGCTAACGAAGCAAACTTGGCATAGGCCGTTAGATTCGCTGATCAGTTCAGCCACTACGTTTAAAGGGAACTCGGCACGCTGTGAACGGGTCTTATTCTTTTTGTGGTTTTTGAAAATTTCCTTTTTTAATGGTGACAAGACTTTTTTCTTCTTCTTTGGGATTCCCATTTGCTACACCTCATTTTGATATTTGATGATGCTCTGCAATGCGGATATCTGCGTCTGTATGGCTCCAATGGACTCTATAGCAGCCTTCCAAATCGTTTCGTCATAGTCTCGCTTGAATAGGTAATCCCCGACATTTCCCTTGGCAACATCACCGATCATGCCGATGCTCATGCCTTCTGTTTTAAGCTTGATCATTTCCTGTGCCAACTTGACGCGGTACGCCTGCTCTGATTCAGCCTTTGACTTTCCCAGCGCATACAGTGTATCTGCGGCCTTGCTCAATCGCTGAGAGGCCGCATAGATTTCCTGGTTAATCTGGATGATATCTATTGCCATAAGTCACCTCCGTTATATGGCCTCAAGCAAATCAAGGTAATGTGTCATGCTGCTCAATCTTTTTTTAGCTTTGCAGTAATTACAGCGTCCGCATCCGGTTGGCTTAACATTTCCGAATTTAACATCCAGAATATGAGGTAGTTTTTGTTCTACTTCTCTAAGCTTTTCTTGGATGATTTGATCGTCAAACCAAATGATTTCTTTGTCTGGAACCTCTTCCTTAGAAACAGCCAGTAGTGTAGGCTCGAGATATTCAAATTTCATTTCTCCGCTCAATCTCTCGATCTCGGCATACATTGCCATTTGAACGTCATATCCGTACATCTGGATGAAGGACACATATTTTGTTCCGTCCCAATATTTTTCCCGAATTCCTTTAACTGTTTTAATATCAGTGAACCGCCCGTTATCCCGAGATAAAACATCTATCTTCGATTTCCACATAGTGCCGAATATATCAGCTGTAAGAATGACCTCTTTCTCACCTTCAAGCACCTTATTGCATAGATCGTCAGCTAAAACCACGTCAATCATGTTGTTTGCTGACTTATATGGTGCTTTAAGTTCCTTTTTAGCTGTGTAAATATCTGGTGTTGATGATTTAAAAGCTTCAAAAGCTTCATTGCTTTCTAGCGCTGCATGTACATATGAGCCAACCAATAACGCTTCATGTTTCATGTCCGTGTATGATCCATTGAGTTTTGCCATAGCTGCGGATTCACATTTTATGAAATCTTTGTATTGCGAAACGCTCATATATTCCTGGTTCGCTTCAGGAGAGTAATAGTTTTCAGCCGTTAGTTCCATCACGTTTACCTCCTGTAGCAAGTTGTTCAGTCAATTTGTTCAGGAATGATTCAGCCATTTCATCGTCCAATTGCATCAAAGGGACACCGTATAGAGCGGAACTCTGATCATCCAGTCGGTTAGCTCTCATTCCTAATGTGGCCCATGCTGCCTTGATCTTCGACAAAACCTCTTTAGATGCTTTCTGACCGAACTTGTTTTGGAATGCGTCTGGATCGTCCTTATCCGTCGGGATGTTGAAGAATTTAAGCGTGAAATATTTTTCTGCGTATGTGAGAGCTTTACCTACGCCTTTTTCGCCCGCAATATCAACACCCTGGGAATACCATGGGCATTCTATTTTTTCCTCTGGATTGTCTGCATTTACCCATGTAAATGTCATATTCAACTCCGTAAAATAGGTGGTTGTCTTTTTTGGCTTATCCCGGTCCATATATTCAATTGTTTCTGACAGAAGGTTCTTATCCGTGATTCTTGGTATCAACAACAAACCCATATCATTAATTTTGTCGCGAACAGATGCCAACACTTGGGCGCTACCTGTATAGTCGTATTGATTTGATTTCGATTCTTTCTTGAGATAATCAACTGACTTACGAACCTCAACCAATTTTTGATAGATGTTCAATGTGTACTACCTCCTAAAGTTTTGGTATAATTGTCGTAACTTAATTTTCAAACAGTCTTTCCCGGGCAGCCAGTGCAATGGCTGCTTCTTCTCTGCGTTTAGCCCTAACCATGCTCATAAAGTAAACTCTCAATAACGTGTCAGTTAGCGTCCCCTTCGCCTTTGCGATCTTCGCAAGCTCTAGAAATGTCAGTCTGTTTGGTATCATCCTCCTTTCCCTCCTTCCCGTAATGCTCTAAAATGTCCAGTACCGTTTTAAGCAGATTCTTTCAGCTCTCTTTCCAGGAATGCTTTGCTCATTTCCATCAGTTCTTCAAGCTCTCGCTGCTCGTCCAAGGTGCGGATTTCCTTAGCCCGGTAACCTTTCTCATGGATGCGGATAATCAGGCTCTCCATGTCTACAGCTGCCCATTGGAAGATCCGTCCACACTCTGTTGTAAAGTAGAACTGCACAGATGGTGCTGGTGGTGGATACTTAGCTTGCATCGTCAAACCCTCCTAATTCCCGCACGAAAGGCCGCGGTATGCTGGTTAATGCTTCATCCTTGCAGGCTGTACAATGGGGCTGTAGGATGTCGTATACTTCCCATTCTGCTTCCCGGCCGCAGCCACATGTTGGTGAGTAGAAACGGTATGGACTTGGTTTCGGCTTGTCTGGTGTTTTAAATGGGATCAGCGTCAACATCGGGTTTCTGAGGTCTTCGATTTTTTTAGCCATGGCTTGTCCCTCCTTATTTGAAATATGGTTCCATGAATTTGAACGCCATTTTTGCTGCATTCTCTTTTTCACCCATTGGTGCAGCAGCACAACTTGCTAGCTTAAGAAGCTTTTCAATTCTAGAATCTTTTATCTGTGCTTCCTTGATGCTTTTGATCATTAACGTTATAAGGTTATCCACACTACCAAATGTAAATAGTGCACCTTCCCACATTTTATCCAGTCGTTTAGCCAACTTTCTTCACTCCTTTTTCTCCTTTGATAAGCGCGTATCGACGGTCTTGTTTGTCGCGTTGTTCTTTCTTCTTCGACTCAAGCCAGAGAATGAAATCTTCTTTAATAGTTCGACGACCGTTTCCAATCTTCATATTTGGGATTCCTCCAAACTCGATCGGCATATCGTAGAGGTCGTATACAGTGTTCCGAGCCATAATTAGGTAATCAGCAATGTCTTGCGCTCTTAGCACTGGTGGTAATTCTTCGAGGCTTACTCGCTTCTTCATGATGTACCTCCTTGGAATTATTATCCTTTTAAGTCGTTTGGTGTCGTGTATAATTGACTTGTGAGTCATGTCGTTCTTTATGCTGTTCGGTCATGTATTTCTTGTATTACATTATCTACAAAAAAAATATCTCTCTCAGCTTTTTTTAAAGCATCCGCAATTGAAAACATTAAAGATCCTGAAATGTTTTTCCGATCACCTTTTTCTATCGCGTGAATGGTTTGTCTGCTTGTCTTAGCTCGTCTCGCTAACTCTGCAACACTCATACCAGTTTCAGTTCTATACTCTTTTACTTTGTTCTTCATGTGTTACACCTCCTTGTTAATAAGGTAACATATGAATTACTTAAGTGTCAAGTATGAATTACACATTTAGATTTTTATTTTGGAATTACATAATGTAATGTAAGAATTACACGGAGGTGCAATGGTGGTTAATTTAGGTGAATTGTTACGCCAATTACGAGGTAAGGAATCTTTGCGAAGCGTTTCTAAACGTGCAGGGATTAGTCACAACTACTTAAGCATTGTTGAAAAGGGGGTAGATCCAAGGACAGGCGCGCCTGTAAAAGCTTCTCCTGATACGTTGAGAAGTTTGTCGCGCGCCTACAATTATCCGTATAAGGATTTGATGCTAGCTGCCGGTTATTCAGAACTTGAAGACCAACATCAAAGAGAAATAGAAAGCGTTACAAAATCAATAAATGCTATAAGCGACCTGAAAGAATTAATCTTGAGATATGATGATGAGCAAATTCTAGATATGTATCATCACACATCAAATGGAGAAGATTTGAAAGAAGAAGATGTCAAGAAAATTCTCTCTTATGTTCGATTTGTTCTGAAGGATTCTTAAATTCCAAGACTGACTTGTCCAATCCTAGTTTTACGAACACTTCATACCAGTCGATCACATCTTTCTTTGTTTGTTTCATGCAAGTCTCTCCTGTCGAATCAGAATGTTAATACCATAATATACGAACATAGGTTCCTATACAACGTTAAAAAAAATTGAGGAGTACGTGCATGGCCTATATACCGGGTCGATGTCGCCTCCGCCTGTTACTTAGAGAGAGACGCAAGTCTCAGAAATGGTTGTCCGATAAAACTGGTATAGATAAGTACAGAATTTCTTATTACGCCAATGACCGAGGTTTAATGCACATTTCCACAGCAAAAACCATTGCTAATGCTCTAGGATGTCATATTGACGATCTGTATGAATGGATTCAAGGCGGAGGCCATGAGTAGATTTTCTACTCTCGGCTCGGTGTAAAAGTTGTCACATCTCACAACCATTTATTTAAGTGGTAGCGCTGCCACGTGTACAAGAATAATTTACCATCTATAGAGATTGTTTTATAGCGGTAATGTATTACAGTAAATTACTATTTGGAATCAATTACATAATTTTTTACATGATGGTGGTAATAAAGGAGGGCATAACCATTTACACTATGGATGTTTAGGTTATAATGAGGGTGTAAGGGTTATGCCCTAGATGGTTGTCACCTAGTTACCTTGGTCGGGCTTAGGTGAACGGATTAGTCGCTGAATAGCGGCTTTTTTTATTTGACAACATGTAGGTACCTGGGTATTGCCTTTCTGACTTTTGTAACTTCTCCAGTCTGGCTATTCTCCAAGTACTGCTTTCCCTTTTCATCCGTGTGCATTGTGTAGTATGGTACATCATTTTCATCCATGAACTCTTCCATAAGACCTTTTTGTCCTTGTACTCTACGAATATCACTTATCAAGGACATATTATTTACCATGAAATGGGACACATCCCAATTTTGATAATCCCATAAAAAGTCATTGATTTTTTCCAATATAGGTGTATTTTCGCCTATTTCCGCTATAGCATTCTTTGTGAAAAAATAATCTTTCCACCCGTTCTTCTCGCCATCATATTTCTTTTCTATTGGGAAAATGTTTTCAAATTCATTTGGACTAAGTTGACTCATGGCCCCCTTGATGAACTCAAATGCTTCCATTATAGATAAAAGCTCATCATAATTTAAACCATCAGTATTTTTAGCATTTAACATTTTCACTCCATAATAAACGAATCTTTTCTTTTCTAATATCTTCAGTTCATCAAATAATGAATCTGAGTTATTTAGGCGTTCAACACATTTAGAGAATGCATTGAAATATAGATCAAAGTAGTTAGGCCGTTCCCTTTTGACTCCGTTTATAACTTTAAAATTCATTTTTATCCTCCTCCATTAAGCTGCTGGCAAAAACTTATTGATAAAATATATTTGTCCTTTTCCTGTAACTTTTGCAGTAAAAGTAAGCTTGGTTGTACCTCCAGATCCGCTGCGATATCCGGTTTTGATCTCAAACAATCCCATTTCCATTGAACGTTGTGTAGGCTTGTTGTACTCAGTTCCAGACTTAATCAGATATCCTTCATCCCTCATCCATTTAAACAATCGAATTTCTCCTATCTCTACACCTTTTTGACGCATCAACTTAGCTAATTGTCCAACCAGTATGGAATCCTCTGATATTTCAATTGCTTCAGCATAATGTACTTTGTGCTTGTCATTTTCAATTTTCAACTCAAGAACTTTGTTTTTCTCTTGTGCTTCTTTCAATACATTTCCTAGTTGTATTAGAAAATCTGGGTTGGTTGTAATTTTTTCAATTGTGTCTGGAGTCATATATGCTCCGTGTTTTCTAATTGATGGGAGTATTTCGTCTGCTACTCTTGCCTGAAACGCAATGCCTTTTTCGTTTTCTGACTTCATCGACAATCTATAGAAGACGTTTTCTGGTATATACTCTTTCCCCACAAGTGGAGAAAATCCCAATTCAATCAAATATCCATTTACTCTTTCCCAACGAATGTATTCTACCTTCCCTTTTTGTTGAGTAAAACCAAGGCCTCGAGACACATCATCCAAATTCAATTGCGCTACTCCGTTTTCGTCAATAAACCCTCTTACCCCGTTAATAGTAATTAATTGATTCATTATTAATCCTCCCTTGTAAAATATAATTTACAAATGCTACAATAAACACGGAGTTGTTACGATACATCTCTGAGCAGTTCTTCAATGCATGTCAGGTTAAATATTACCTTGAGCGAATCCGCCATATCCAGATTAATTTTCGAAGTGCCTTTCTCGATTTTGTGATAGAACTGTTGCGAAACTCCCAACTTCTCAGCCACTTCTTTTTGAGATAAAAAGTTGATTTTTCTCAGATACTCTACTCTTGTTTTTGGCTGTGCCATTGTTTTCCACCTCCCATAATTAAATAATACAACCATATGTTTATTAAATCAATGCCAAGGAGATGTTTTTTTGAATTTATTTTCCGCACGTTTAAAATGGCTAAGAGAACGCATGAATATTTCTCAAAAGGAAATGGCACAAAAAATAGGTGTTTCCCAGCAGTACTACAATAAATTCGAAAAGGGGACTGGACAACCGAATCTTGAAACCTTGTATAAAATCAGGCATACAACTGGTGAATCACTAGATTTTATTATTGGGTATACTTTTGAAGATAAGGAAGCAACTCTTCTTTACGAAATTTATATTGACCACAGGGATCAAAGAGAAAAATTGGAAAACGATATAGAACATCTCAGTAACGATACTTTTGCAATGGGAAAAATGAACCTTGAAGAGAGGATGTCACTTGTTAGCAAACTAAGAGAGGGTGTTTTGGATTATTTAAAGAGGGAAGAAAGAGCTTTAGATATGTTCATAACTCATATTTCTGAACTACCAGGTTTTGATGATCACATGAATAAAGAACACTGGAAAAATGAGTACGAATCTTATAAAAACAACCATAATGTTTTTTTTACTGACTTTGCAAAGAAATACACGGATATTTTTGATTGAACAAAAAGACCATACTCACTTCGGGTATGGTTTTTTTGTTACCCCTACCCTACAATACAGACATAGAGAGAGTTAGGAGTGATCCAGGTGAAAGGTCATTATTATAAGCCTCATTGTAAATGCCCAGGGTTGCAGAAAAAGAAGTGTAAGTGTGGTGCCAAGTGGGCGTTTTTGCTAGACTTGGGGAAGAAACCGGACGGATCCCGGAACCAGAAGAAGCGCGGAGGATTTGACACCAAAGACGACGCAGAGGCCGCAGCAGCCATCATGATGGAGCAACACAAGACTAACACCCTGCCAGAAGATGTGGCCCGTAGAGAGGCTGAGGAACAGCGCAAACTTGAAGAGGAGAAAAAGGAAGAACAACGACTTAACATTAGCTTTGAAGATCTGGCCGAACAGTGGTACGAAGTATATAAGTCCACGGGAAAACGAAAACGAGTTAATACGCTTAAGAATAGAAGAAACGATAAAGTCAGACTTGTTGCATGCTTCGATAAACCAGCGCGCGAAATAACGCATGATGAATATCAGGATACCCTGATACAGTTGAAAGATGGCTCTCACGAAAAGCATAAAAGAAAATTTACTACAAATACTTTAAGCAACACACACGTGACTGCAAAGATGATATTCGAGTTTGGGATTAAGCATAAATTTTTAGAAGAAAACCCAGCTAAAGGCGCTCACGTACCTAAAGATTACCAAACAGTCGAAGAAATAGAATCCTGGGAAGACATACCTGATTTTTTGGAGCGTGACGAGCTTCTGATTTTCCTTGATACTGCCTACCTACATGGAAACCCATTAGACTATGAAATATTCACCACTTTAGCGTATACTGGTATTCGGATTGGTGAATTAGAAGCGCTTCAGGAACCTGCCTTTAATCCAGCATTAAATAAGATAAAAATTATAAAGAACTATATAAATTATAACAATTACACAAAGTTCGAATTGGGTCCTCCTAAGACAACCTCTTCTATTCGTGAATTAGATATTGACCCAGAGATCACAACCATGATGTTAGGATTAATCGAGCAACACAAGGTAATTAAATCCACCAACAGTTCACATCTTGACCAAGGATTTATATTCGGGCAGAAAGTAGGGAGGTATATTGGTTATCCGATTCCTGAAGGCATTATTAACCAAAGGATGAAACGCATATTGCGTATTTCCGGTTTAGACAAAGACCTGTCGCCCCATTCAATGCGGCATACATTCACGTCATTGATGGCAGAAGCAGGAGTTAGCCTGGAACAGGTAATGGAGATGTTGGGACATGCTGGCGATGAAATGACGAGACGAGTTTACCTACACACCACCAAGACGAAGAAAAAAGATGCAGTAGAAAAATACAGCAATTTGCTCCAAAATACGATCAATCGAGAGCAAAATGTTACCCAATTGTTACCCAAGCTTGTTTGAACCTTGATTTTGCTTGATTTATAAGCGTTTTATGACTTTCTAATAAAGTCGCATTTTTCGGTACACTATTACACAGGTTGAAGAACGAAAGGATAGATGGACGTGGCACAGTTGTTTTTCAAGTATGGAGCAATGAACAGCGGCAAATCCATTGAGATTCTCAAGGTAGCCCATAATTACGAGGAGCAGGGCAAGTCGGTGCTCATCTTCACTCCATCCCTGGACGATCGGGACGAGGTCGGGTATATTTCCTCCCGCATCGGACTGCGCAAGCAGGCCATAGCTATCGACGAGAGCACAGATATATACAGTATAGTCAGCAGCAATCTGCCGAAGCCCCACTGCGTGCTGATCGACGAATGCCAGTTTCTGACCAAGGACTGTATTCTCCAGCTTGTGCGTATTGTGGATGAGCTGAACATACCGGTAATGGCTTTTGGACTAAAAAATGATTTTCAGAACAACTTATTCGAAGGCAGTAAATATATGCTGATCTACGCGGATAAAATTGAAGAGATGAAGACGATCTGCTGGTTCTGTGAACGGAAAGCCACAATGGCGCTACGTGTAGAGAACGGCCAACCCGTATACAGCGGCAAGCAAATCCAGATCGGCGGCAATGAAGCTTATTATCCGGTCTGCCGCAAATGCCACAAGAATCCGCCCTTGTAA

Protein sequences of DBSCAN-SWA_9

>NZ_CP009241|5401341:5413870|5403973_5404336_-|WP_038594881.1|DBSCAN-SWA
MTREEIMAMEPGKKLDHIVIETVLKWHKVELTPKGNGWFWSDGNTHVGWAVFSPSVDISAAWEVVEHINKRESHGLALEFYPNEQEWGADFDELGLSSQAVSKTAPEAICKAALFAVLNL
>NZ_CP009241|5401341:5413870|5407626_5407902_-|WP_052092218.1|DBSCAN-SWA
MKKRVSLEELPPVLRAQDIADYLIMARNTVYDLYDMPIEFGGIPNMKIGNGRRTIKEDFILWLESKKKEQRDKQDRRYALIKGEKGVKKVG
>NZ_CP009241|5401341:5413870|5411218_5411767_+|WP_038594904.1|DBSCAN-SWA
MNLFSARLKWLRERMNISQKEMAQKIGVSQQYYNKFEKGTGQPNLETLYKIRHTTGESLDFIIGYTFEDKEATLLYEIYIDHRDQREKLENDIEHLSNDTFAMGKMNLEERMSLVSKLREGVLDYLKREERALDMFITHISELPGFDDHMNKEHWKNEYESYKNNHNVFFTDFAKKYTDIFD
>NZ_CP009241|5401341:5413870|5408328_5408757_+|WP_038594899.1|DBSCAN-SWA
MVVNLGELLRQLRGKESLRSVSKRAGISHNYLSIVEKGVDPRTGAPVKASPDTLRSLSRAYNYPYKDLMLAAGYSELEDQHQREIESVTKSINAISDLKELILRYDDEQILDMYHHTSNGEDLKEEDVKKILSYVRFVLKDS
>NZ_CP009241|5401341:5413870|5408927_5409152_+|WP_038594900.1|DBSCAN-SWA
MAYIPGRCRLRLLLRERRKSQKWLSDKTGIDKYRISYYANDRGLMHISTAKTIANALGCHIDDLYEWIQGGGHE
>NZ_CP009241|5401341:5413870|5406036_5406681_-|WP_038594892.1|DBSCAN-SWA
MNIYQKLVEVRKSVDYLKKESKSNQYDYTGSAQVLASVRDKINDMGLLLIPRITDKNLLSETIEYMDRDKPKKTTTYFTELNMTFTWVNADNPEEKIECPWYSQGVDIAGEKGVGKALTYAEKYFTLKFFNIPTDKDDPDAFQNKFGQKASKEVLSKIKAAWATLGMRANRLDDQSSALYGVPLMQLDDEMAESFLNKLTEQLATGGKRDGTNG
>NZ_CP009241|5401341:5413870|5407979_5408207_-|WP_038594898.1|DBSCAN-SWA
MKNKVKEYRTETGMSVAELARRAKTSRQTIHAIEKGDRKNISGSLMFSIADALKKAERDIFFVDNVIQEIHDRTA
>NZ_CP009241|5401341:5413870|5409469_5410117_-|WP_038594901.1|DBSCAN-SWA
MNFKVINGVKRERPNYFDLYFNAFSKCVERLNNSDSLFDELKILEKKRFVYYGVKMLNAKNTDGLNYDELLSIMEAFEFIKGAMSQLSPNEFENIFPIEKKYDGEKNGWKDYFFTKNAIAEIGENTPILEKINDFLWDYQNWDVSHFMVNNMSLISDIRRVQGQKGLMEEFMDENDVPYYTMHTDEKGKQYLENSQTGEVTKVRKAIPRYLHVVK
>NZ_CP009241|5401341:5413870|5407156_5407399_-|WP_038594896.1|DBSCAN-SWA
MAKKIEDLRNPMLTLIPFKTPDKPKPSPYRFYSPTCGCGREAEWEVYDILQPHCTACKDEALTSIPRPFVRELGGFDDAS
>NZ_CP009241|5401341:5413870|5404332_5404533_-|WP_038594883.1|DBSCAN-SWA
MFKRFLSSTSPDAQNQSKDASFIELSLILQRGVNRSLKQSELSTVWSLDNEQTAVLTNLLKEAKGK
>NZ_CP009241|5401341:5413870|5407412_5407634_-|WP_038594897.1|DBSCAN-SWA
MAKRLDKMWEGALFTFGSVDNLITLMIKSIKEAQIKDSRIEKLLKLASCAAAPMGEKENAAKMAFKFMEPYFK
>NZ_CP009241|5401341:5413870|5411845_5413198_+|WP_081965898.1|integrase|DBSCAN-SWA
MIQVKGHYYKPHCKCPGLQKKKCKCGAKWAFLLDLGKKPDGSRNQKKRGGFDTKDDAEAAAAIMMEQHKTNTLPEDVARREAEEQRKLEEEKKEEQRLNISFEDLAEQWYEVYKSTGKRKRVNTLKNRRNDKVRLVACFDKPAREITHDEYQDTLIQLKDGSHEKHKRKFTTNTLSNTHVTAKMIFEFGIKHKFLEENPAKGAHVPKDYQTVEEIESWEDIPDFLERDELLIFLDTAYLHGNPLDYEIFTTLAYTGIRIGELEALQEPAFNPALNKIKIIKNYINYNNYTKFELGPPKTTSSIRELDIDPEITTMMLGLIEQHKVIKSTNSSHLDQGFIFGQKVGRYIGYPIPEGIINQRMKRILRISGLDKDLSPHSMRHTFTSLMAEAGVSLEQVMEMLGHAGDEMTRRVYLHTTKTKKKDAVEKYSNLLQNTINREQNVTQLLPKLV
>NZ_CP009241|5401341:5413870|5402946_5403135_-|WP_038594873.1|DBSCAN-SWA
MPRFYYHSWTSNEDALLTEIMTKDNRKKVLDRFNEAAEALDRTAKSCQNRWYELRAAQNKAV
>NZ_CP009241|5401341:5413870|5405258_5406053_-|WP_038594889.1|DBSCAN-SWA
MELTAENYYSPEANQEYMSVSQYKDFIKCESAAMAKLNGSYTDMKHEALLVGSYVHAALESNEAFEAFKSSTPDIYTAKKELKAPYKSANNMIDVVLADDLCNKVLEGEKEVILTADIFGTMWKSKIDVLSRDNGRFTDIKTVKGIREKYWDGTKYVSFIQMYGYDVQMAMYAEIERLSGEMKFEYLEPTLLAVSKEEVPDKEIIWFDDQIIQEKLREVEQKLPHILDVKFGNVKPTGCGRCNYCKAKKRLSSMTHYLDLLEAI
>NZ_CP009241|5401341:5413870|5401341_5402262_-|WP_156130933.1|DBSCAN-SWA
MESIKPAMQEFLKRVERLRAEALKPSSEALDENQDLPPKKFSGSPATSTEGCPKCDYTGTINSFRWEQPEGYPIPMQVAVVENCSCHMDRMFQKYNAAESFSPKERGYTFKTATVDNLNREQFGVAIEFVRDIKRHMELGTWLYIFGDDARVAEASKEKGAILNAYGTGKTYLMQCMANAFSYRKIPAIYVTESKLYGEIKATYSRDSEESEIDVLQRYYNVPILMIDDIFTAQYKDWAEGMLYNIIDERMKNNKVTIMTSNYALGRIRERLPMNGGKIGSRINGKAEQIEMLGPDRRPQSKSEPA
>NZ_CP009241|5401341:5413870|5406936_5407167_-|WP_038594894.1|DBSCAN-SWA
MQAKYPPPAPSVQFYFTTECGRIFQWAAVDMESLIIRIHEKGYRAKEIRTLDEQRELEELMEMSKAFLERELKESA
>NZ_CP009241|5401341:5413870|5406721_5406889_-|WP_156130934.1|DBSCAN-SWA
MIPNRLTFLELAKIAKAKGTLTDTLLRVYFMSMVRAKRREEAAIALAARERLFEN
>NZ_CP009241|5401341:5413870|5413300_5413870_+|WP_038594905.1|DBSCAN-SWA
MAQLFFKYGAMNSGKSIEILKVAHNYEEQGKSVLIFTPSLDDRDEVGYISSRIGLRKQAIAIDESTDIYSIVSSNLPKPHCVLIDECQFLTKDCILQLVRIVDELNIPVMAFGLKNDFQNNLFEGSKYMLIYADKIEEMKTICWFCERKATMALRVENGQPVYSGKQIQIGGNEAYYPVCRKCHKNPPL
>NZ_CP009241|5401341:5413870|5404913_5405240_-|WP_052092643.1|DBSCAN-SWA
MDIIQINQEIYAASQRLSKAADTLYALGKSKAESEQAYRVKLAQEMIKLKTEGMSIGMIGDVAKGNVGDYLFKRDYDETIWKAAIESIGAIQTQISALQSIIKYQNEV
>NZ_CP009241|5401341:5413870|5410132_5410885_-|WP_038594902.1|DBSCAN-SWA
MNQLITINGVRGFIDENGVAQLNLDDVSRGLGFTQQKGKVEYIRWERVNGYLIELGFSPLVGKEYIPENVFYRLSMKSENEKGIAFQARVADEILPSIRKHGAYMTPDTIEKITTNPDFLIQLGNVLKEAQEKNKVLELKIENDKHKVHYAEAIEISEDSILVGQLAKLMRQKGVEIGEIRLFKWMRDEGYLIKSGTEYNKPTQRSMEMGLFEIKTGYRSGSGGTTKLTFTAKVTGKGQIYFINKFLPAA
>NZ_CP009241|5401341:5413870|5410941_5411184_-|WP_081965897.1|DBSCAN-SWA
MVVLFNYGRWKTMAQPKTRVEYLRKINFLSQKEVAEKLGVSQQFYHKIEKGTSKINLDMADSLKVIFNLTCIEELLRDVS
>NZ_CP009241|5401341:5413870|5404532_5404910_-|WP_052092217.1|DBSCAN-SWA
MGIPKKKKKVLSPLKKEIFKNHKKNKTRSQRAEFPLNVVAELISESNGLCQVCFVSRGTQTHHIMPRSRSGRGVKENGLRVCNYCHKMIHEKTSVLNKYIELQREKYGENFWFDELDRIQYKEEA
>NZ_CP009241|5401341:5413870|5403406_5403601_-|WP_038594876.1|DBSCAN-SWA
MTREERIKSEIEVWENTAAIYASDMPDAIKYGDFGGIHYNEHMIEFSRRKIAELEAELQQLKSA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_156130933.1|5401341_5402262_-	ATP-binding protein	S5W9L4	Leptospira_phage	3.3e-08	30.4
WP_038594873.1|5402946_5403135_-	hypothetical protein	NA	NA	NA	NA
WP_038594876.1|5403406_5403601_-	hypothetical protein	NA	NA	NA	NA
WP_038594881.1|5403973_5404336_-	hypothetical protein	NA	NA	NA	NA
WP_038594883.1|5404332_5404533_-	hypothetical protein	NA	NA	NA	NA
WP_052092217.1|5404532_5404910_-	HNH endonuclease	D0R7I8	Paenibacillus_phage	9.1e-21	52.9
WP_052092643.1|5404913_5405240_-	hypothetical protein	NA	NA	NA	NA
WP_038594889.1|5405258_5406053_-	hypothetical protein	A0A0A7RUC1	Clostridium_phage	8.8e-50	40.7
WP_038594892.1|5406036_5406681_-	hypothetical protein	I6T7Q2	Staphylococcus_virus	1.0e-27	33.3
WP_156130934.1|5406721_5406889_-	hypothetical protein	NA	NA	NA	NA
WP_038594894.1|5406936_5407167_-	hypothetical protein	NA	NA	NA	NA
WP_038594896.1|5407156_5407399_-	hypothetical protein	NA	NA	NA	NA
WP_038594897.1|5407412_5407634_-	hypothetical protein	NA	NA	NA	NA
WP_052092218.1|5407626_5407902_-	helix-turn-helix domain-containing protein	A0A0C5AN65	Paenibacillus_phage	4.9e-08	43.8
WP_038594898.1|5407979_5408207_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_038594899.1|5408328_5408757_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_038594900.1|5408927_5409152_+	helix-turn-helix transcriptional regulator	A0A1P8CWW6	Bacillus_phage	4.9e-06	50.8
5409073:5409086	attL	NA	NA	NA	NA
WP_038594901.1|5409469_5410117_-	hypothetical protein	Q2I8D0	Bacillus_phage	2.2e-43	39.9
WP_038594902.1|5410132_5410885_-	antirepressor	D7RWF4	Brochothrix_phage	2.9e-50	45.9
WP_081965897.1|5410941_5411184_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_038594904.1|5411218_5411767_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_081965898.1|5411845_5413198_+|integrase	site-specific integrase	A0A0C5AN64	Paenibacillus_phage	2.5e-68	35.0
WP_038594905.1|5413300_5413870_+	thymidine kinase	A0A249XZX5	Enterococcus_phage	9.1e-49	51.6
5414862:5414875	attR	NA	NA	NA	NA

Sequences of DBSCAN-SWA_10

Nucleotide sequences of DBSCAN-SWA_10

>NZ_CP009241|6894158:6913707|DBSCAN-SWA
TTCACATATTATCTGTATACCCTTTGCCAGCCTCAGGATTACTCACGATCCCCAGCACCACCAGCACGCCGAGCACAGCATTTACTGCTGCCATTACTTCTTCAAATTTCTCCGGTGTGAATTGCACGTCAAAGATCACGCCAACGGTCTGCACCCCCAGCAGCACTGCTGCCGTCAAAGATACCCATAATCCATAGTTTCTCCATTTGCTTCTCACTATTTGGCCTCCTTACTATTGATTGTCACTGTTTTGTTCTTGGCATCATACGACACTATAGCTCCCAGAGCCTCTGCTATGGCTCTTGCTGGCGTATAGGTTACCCCTTCGTCCGCTACACCGTCAGCCACCTTCTGGCCATCCACGATTACTGATACGATTACATCTTTCTTCACTTCTGAATCCTCCTTTGTACATTTACCAATTTTGATATATGCCGCTGCCACCTGGGATGCTGTTGGTTCCTTGCCGGCACGTAACTGAGACGTTGTGAGACAGAAGGTCATTTGGAAGTGTGGCGCATCTTTAATGGAGACAAAATCCCCGCCCCACTCTAGCCCGAGCGCTTTGGCCCCCTGTACCACCTCTGTCCAATCCCTCATTCCGTCTGCATCACCATCGCGTTTCAAGTCCCAAGATACCTGTTTTCCATCTGGCAAGAGCAACGCAAAGTCGACTGCAAGTCCAAAGTTGTGGTAACTCGTGCCCCCCTTGGCATTGGTCACAATAGCCCCTGGCTTCGTACGACCCTGAGCGTACAGGGCATCCTGCTCTTCAATGCTCCGGAGCCCTTGGGTAATGACTATATTGACTCCCCGGGCGTAACTCCGCTCAATGAGAGCCAACGTAGCCGCTACAACAACAGGATGCAGCCCGATTAGACGTTTATGGGATTTGAGTTTTACCTGCTCTAATGTACGCATCACATCACTCCTTATTTCCCTAAAAATTGATTGCCTGCCGCTGCTCCAAGAGCAATCAAAACAATGTATTTAATCATGTCCATCCAAAGTTTCCGCTCTGCCCCACTGTCCTTGTTAGCTTGTTGAAGCAGCGAGAAAATTTTGCTTTCGAGGCTGTCGAACTTAGCCATAATTGCACTGAACTGAATCTCCATTTTGATTGTCGAACTTTTAATCTCCTTAATACTTTCATCATGACGATGGTCATTCTCTTCCAGTAACCGCAGCTTAGTGTTTGCCGTAACATTTTCGGCAGCTATTCGGGCAAACTCACTAGTCAGAGTATTCAATCCCACTTCTACTTCTTCAAGACGTTGTTGTAATGGCATTACATCCTCAACCCCTCCCCTTACATCTGCTACTCCGTCTGCCATTATGATGTACCCCTTTATCTAGTTGGTGTAAAAAAGAGCCCCCGGATCAGCTTCGAGGGCAAAATAAAAACGCCTCATTAGGCGCCATCCTTAAATTTATTTAGCTGGTAATGGTTCTCCGTTTTCATCCAGATCAGACGCTGCCAGGTAGGTCTTAACCTCAGGCTGCAGTTTGACTGGCACTTGAGCATAAGTTTTCAGCCCCTTAATAATCAACAAGGCATAAATAACAGACATTGTGTCACCTCCCTTCATGAGACGTAGACCGCCTGACACCAGCAGCCCTGCCAACCAGTTACGCATTGTCGCCAAGCAGCGCGGCAACATCCTCGCGAATTACAGCCGGTACTTGTTCCAGCTTTTTAAGTCCCTTGCGGACCAAGCTTGCATATACTTGTGTCATTTACTTAGCACCTCCAGTCAAGGGTAATACCAGCTCGTACAGCTCTGTTAACGCCAATTGCGCACTTACAGCCTCTTTTTGTGCAGAGAGTAACTGCTCATAATTATCAGCGAGAGCCATCTGTGTGCTGGATAGCTCTGTTGTCAGGTCCTTGATTTGCTCGGTTAACGGCTTCTGGTAGACTGGTTCCGTGGGTTCTTCTGGAGCTTCTGGGTTTGTATATAAAAACTCCAGTTCTTCTGTCTCTAAATTCACGCGAAATCGTCCCCAAGACTCGCGAAACTCAACATTATATTGACCGAACTCTAATTCAATCATTCCTACCGTTTCCTCTACACGTTCATTAAGCACCTTGAAAGATGCAAAATCCTGCTCGCGAGTTGTTTTAACAACATCACCGACCATTTCGCCAGTATCAAGAATTACATTTCCCGTCGCTTTATCAAAATAAATTTTTCTTCCGATTTCCATAAAAATTCATCCTCTCAATATAATTATTTTTCCCATGCTTGCCAAGTTAAAGTGTGTGTTCCGATTGTATTGCTAAGTGAAAAGCCATTGCCTGTCCATGTATCGTTACTTGTCCCACCATATTCCCACGAACCGTTAGGGCCGCCGTTGTACGATGCCCAAAGCCATTTCCCGCCAGCGCCTCGATATACAATATAATCACCAGTAGAATCGTAATATTCTATACTTATTGCATAAGGGACAAAAGCTAGTCCACTTACGGAAAATGAACTTCCCGGATTAGCAGACGAACCACTTGCGCTCCTTTTTCCTTCTACCATAGTTCCTGTGAGTCCAAGAATATTAACCCCATTACGGATATTAGAAGCTACGAGCCCCGGGGAGGCACCTGTAACCCACGTGGATCCATCATAGTAACCTTGTGGTGGCTGTAAAAACACTCTATCACCAGACCATACTGTAAAAGCGTTAGCTGGCATGTGTATATTTTCGGCACTTCTGTTTGGCATCGTCCCCGCAGTCCCCGCAATAGTTGTCCCGACCAAAACTCTGGTTTTGTCAAACGTCACAGCAGCCACTACACCCTGTCCGTCATGGTATCCAAAAAGGATAGCCTGGGCTATTGCGCCAGGCGTGACGGTTACAGATCCTCGATTTGGCATAGTTCCTAATGCGTAATAATTGTCCTTCGAACTAAAATATCTGCCCGCGATTACATCGCTGGGATTTGCCGTACCCGGTATCCATAGAATCGACATTTATTATCCCTCCTGTGTAATGACCGCCGTGACCCAAGTAACACTCGGTACGGAAGTCACCACGGCCACATTGACCCAAGTTCCAGCGTTGCAGTTCAGCGTAGGCGCTATAAAAGTGTATCGTCCGCCCCCCATCGCGGTACTTGGTAAAATCACGTACTCTCGTGCAATGCTATTAGTGTCAGTATACTTAACCGATATCTTAACAGTCGCCGAATTGTGTAGAGTTAGGGCTGATTTTACCGTAATTACTGCATTCGCTTCTATCGGAACCTCATAGTAAGCGACAAGGGTTTCACTAGTGGTGGAGAGCGGAGCTTCCTTTGCAACTACTCTATTAGCAGCTACTCCCGGAATTTTCCCGGTGGCGTCTGTGGTAACAACGTCAGTCCAGCGACTCCAGTAATTCCCGTCGGAACGTGTTCTAAATCTCCTCATTGGAGTGCTATTACCCACGTTAATGGCTTCTTGGACGAGGTATCCAGATGCATTAGCATATACAAGCAGTACACACCAATCCATCCCCGGACCATTAACGTAACTGGCGCTTGTTGCTAAGGTGTACATACCTAATGCTGTTTTGTTATTTAGGTTTTCACCAGCAGAGGGTGCTCCCCTTTTAACGAAAGAGTTGCCCGACTCACTAGTCATTACTTCTACCCATGAGCTCCAGAGTCCTTGATCCGTACGAGTACGGTAATACTCAAAAGACCCAAATACTTGAGTAGCTGTTTGTTTAACGAATCCACCACTTCCCTGAGACCTCGAAACTGACAGGACATAGTATGAGTCCGTTGGTGGACGGTGGACGTAGGATGCGTAGTAGTCGCTTAGAAGCATGTAAGAACCGTTGCCATGGTAGTCATTTAAATCTGACCCAGCAGGAACGACTCCCCTTTCCTTGAAGAAGCCGACATCGTTTGCGGAACTCCATATTCTTGTCCATGTCCCCCATACGTTCAACTCTTTCCGTCTGTACCACATTCCTGTTCTACCTACGTCAGTAGCATTAATGGGCATGAACGTTTGCATGGCATAAGAATTGTCAGCGTTCCAGCTAGTGTGCGTAAGATAGCCCTGATTGTTGCCATCCGTTCCAGCCCAAAGACTTCCTGTCCACGATGCGGCAACGACATAAGAGCCATTGTGCACAAGCGCATTGGCGTCACCTACAGTTTGCCCTACTCCGAACAAGCCCGATGTGTTTGCACTGTTCAGGCTCTTCCGCCAAGCCGGGTAATATTGCGGCCCATTATTAGCGTAAATAAATTCACTACTGTTTGTATCGGCGTCCACAGCGTTGGTCGTAGGTGTCGTAATACGGATTGTATAATTGTCAGCGAGCAGGGAGCCAATTACTTCCACAACCGCCCCCGCAAGATGTATTAAACCGAGGCCTGTGTCGGTAATGTGGACATTATAAGCATAGGACCAATCGCCACGCCCTACCCAGTATCCTCCCTCAGGGGAATGTGCTCCCATATTCTTAAGCATCGTTATAAACTCAGGAGTCGTAACGCCCGTATCTGTCCCGCCAAAAGTAACGTATTTTCCTGCCTTGGCAAATCCTTGGGCAGCCGCACCTGTTAGTAACGTATCCCATGCGCCCCATGCGTCGCTGCCGTATAGCGCTTGACGGTACTTAATTGGGGCAGATATATTATACGGATAAAAATACTGAGTGACTGCGGTAGCCCCTACTCTATTGTTACCCCTGACTGAGGCAACGGTGCCGTAAACTGCGGGCCATCCCGGCGAATCGTTAACAAAGAAAATAGTCTCTCCTCCGGGGTAGGTGCTTGGCGCATCAGTCGCTAGTCTAAAATTTTCGGCACTTCTTGCATCCACTCCGTCAAATATCGCAGCTCTATTTTGGACGGCGACATTGAGCCATGGACCCCATTCCGTTTCTGTGCGCGTTCGATACCATTTCCCGTACGGTGCGGTTGTTTGTGTAGCTTCCTGCACAATGTAACCTTGGCCGCCGACATATACATTCAGGATACCCCAAGGTGCTGTTAATGGAGGACGGTTTGCGGGGACAGCCCCGTAAATCTGATATATCCCTGGTTTTGTGTATTGGTTATAATCTACATCTACAATCCCATTAGTTTTAAATATTGAATCTCCAGATACCTCTATCCAGTTCCCCCATACTCCTCCAACCTGAATGCGCTCAAACGTAGTTGGTTTTCGTGCGGGAGTTCCATTTAATGTAGTGGCCCGCTGCAAACGGTAGTCCCACTGATTATTAGAATGAACATATGACTCAATATAAAACCAATCTGTTGAGGCATTTGGAGCATTTACAAAACTTTCTCCGTCAAAAAAACCGTTTACTGTTAAATTATTTAAGTTATACCCAGTAGAAAGATTAATTACTGTCCCAGTCGGGGTTGTTAATCTATGCTTTTGGATCAGATAACCACTTCGCGTAACTGTATCATCTGGTATAGTTTGTACTGCCCTAGGTAATGTTGTGGCAGCACCAGTGTATACAGTACCTTTGCTCCAAGCAACATAACCATGAGGAGACATCTGTTTAATACTAACAACGTAATCGTTTCCGTTGCTCGTCCGGGCTTCAATAGTGATTTTCAAAGTTGAAGCACTAGAATCCCACGAAATCGGAGAAATAGAAATTGCATCTTGTATTGGTCCAGTTACTTCTGTATAAGCATCAGTTTGATAACTTATTGTTCCCCCGCCATCTGTTATGATTTCATAGCGCTTTGTTAATTTCCCCGCAGCATTACCATTAACCCACGTTCCTGCAACTGTAACTTCTACAAAACCAGCGGTTAACCCCGTGTGAACTAGGTTTATCTTTTGATTTGGGACGCCATGAGTGAAAGAGAATGTAAATACACTTTCTCCTAATTTATTTCCACCCAAACTCAAACCGCTTCCCATTACTTGGCCTATTTCATTCAGTGCTGCTACACCATTTGCCGTGCCCTTTTGGGTTGTCGGGATTGAAGCATTCTTTGCCGCTGATTCTGCTGCATCAGCCTTACTGGTCGCATCCTGAGCAGCTGCATTGATAGCTGCGTCTTTGGCTGCATCAGCCTTAGACTGTGCCCCGCCTGGTGTCTCCTTGGCGTTCCAGGTTGTTCGCTCTGGTGCTGTGATGTGGCGGGTTGCATCATCCGCGTGGACTTTAGCTGCCTCTAATGTTGTAGCTGGCGCTGTCCGCCAGGAGGATTTACCCGTGATTCCCTTAATCATATTAGCCAGCCAACCCAGCAAAGTGGTCAGCGTACCAGTTTCGCCAGTGGGTGCGGTGCTGTCGCTTATCGTTCGATTCCCGATGACAGTGTCTGATGCTGATCCTGTGCCACCAGCACCCGCCGTAATCCCGGCAAGCTTCGCCTTTTCAGCCGTGGTGTAATCTTCGGTGCTTAGTTGTTTTCCGCCCACCTTGTCCACCTTGATTGCTGCTACAGCATCCAGATCAGACCGTAAAGCATAAACCAGCGATTCATCGATTACTGCCGTTATGTTTGCTGCAGTGCCGACTACAACGATACAGTCAAATGACTTTTCTATGATGTCGGTACTATCGGCGGGGGCAATATAATCTGCTGTTACGCCAGAGTTGGCGTAAGCATATAGAATTTCCCCTACATCCGGATCATGTGCGAAAACCCCGACCTCTCGAAAATAAAAGCCCGTTGTAATTTCTGCATTTGATAAAACCGCTCCAATTACCGCCTTATTAGGCAGTTGAGTCTTCAGTCTTGTAATCGGCAAATTCTTTTTTTGAGAAATCAGCCCATTTAGCGCTGAAATAGACTGCCCACTAAGTGTTCCATCTCCGACCGCAATACGCGTGTAGTTAAGTGCCGCTCCCGCCTGCGCCTTGCCCTGAAGTGCAATACCTTTTGTCGTTATTGTCATGCCACCAAATACTGCCACAAAAGCCCCTCCTTAAATAATAATTCGTTCTCCAACGTGTATAAACCCACCTATATACAATGGCAGTGTTTCAGCTTGTGATATGGTGACGCTATCTAGTACAGTAGAAAGACGTTTAATTGCATTCACGGCTTCTATAAACTCTTGTGCACGTGTGGTAGTAACATCCGCATTATTAGTAACCACTCGAAAATGATAAGGATCACCGCCATATTCCCACCACTCCTCAACTGAACCCTCCCCAAATAGAATCTTTATTAAACTTTCAACAGCACCAGCTGTTCCTTTATGCCGGTGAAAGGAAATGGCGTTGTTAACCAGGAGTCGCTTTTGTCCCACGGATAATTCCGGATCATAATAGGGCGGACGGTACTGAAGTGCCAATTGATCAGTCTCTTCATTTGTCCATTCTGTCGAGCGACTAAATATATTTAGTGATGTTATCATATCCGTTGTTACTTGAAGTTGTTTATCCAGTGCAGTGGCGGCGGCAGTGATAGCCGGATCGTTTCGGATCGAATGCGGAAGGAGATCAAGCAGGCTTACCGTTTGAATATTAATCATCAACAAGACCTCCATAGGTGATTGTTGTCGTACCCTCCTGTGCAATTTGGGTCATTGTCAAAGCCGTATACACTGGTGCTGTCGGCACTACGCGCAGCGCACCCGCTTCCATGACACGGGTAATCAATTCAGAAGGATTGATATGTCGACCAAGCTTGGACTTTTGCCAGAGCTGATAATCAGCGATTGCGGTTGTTACCGCCGCCTGAATGCTAGATACTTCCGAAGCCCGACTGCGGCTAATGTAATAGGTAACAGTAGTGTTATAAGATTCAGGTGTCGGGGCAATTACCTTCACCTGATCCGTCAATGGCCTAATGCCGCGGTCATCCAATATCTCACTGACGGCATCAAGGATATCCTGGCCTGGAATCTGTCCACCAATAAGCAAAGGAACTATTGTCACCTTACCATCATCCGGGGAATAGGCATGCACATCCAGAATTGCTGCAGATGTGGATTTTGCCCAAAACTCGTACGCCCCCTGCGGACCAGCTGTACTATACGAATCCGGAGCTGCCCGGATGCGATCCCGAAAGGCTTCATCCGTCTCCTCTGCAGAACCTCCACTGCTGATTGTAGAATTGATAACAGATTGAACAAATGGTAATTGATCCATAAGAACATTAATCTGGCCCGGTAAGAAACCATTGCCGCCAGTACCGAGAGATGAGCAAATCGCTGTAACGGTACCGGTGGTTGCTCCGGCAGGTATCTCTACATACTCTGTTGTCGCAAAATATATAGAACCATCACCTCCTAGTATACCGACACGAGTACCCGCAGGAATCGAAGTGACGGCTAACAAAGGAATGGACAGTGTAAATTGCAGCGTGGTGATTGCCGAAGACGCAGGCAATCGCTCCGAACCCTGAAATGCACCCATATGATCCAACAGAACTCCCGATGCATACCGTAACAAATTGCCCTTTGCCGTCTGGTTAATAAGTACTCGTTGTTGAACAATCAGAACAGCCAATGAAGACAAAAACAGCCTCACCGGATCGGCAGGCTGCAGGGTTCGGCCGGTTAGGCCCTCGTAAATAGCAATCACGTTTCGCTGGATATCCGCAGCTTCTTCAGCCACGAACTGTATTTCAGGCAAATCTGCATATAGCACCAAATCACATCACCTCCTCATTTAAACTATATTGCACCACTGCTAGTATCCGGCCTGTCAAAGCATCAATCAGGTCATCCTTAAAAAATATGTCCGTTATTTGCGCTCGTGGCTCCTGTTCAGCCACAGCAGACATAATCTCGCTTATAATACGTGTCTTTGCGAAGGAATAGGGCTCGTCCACTATCCCATAATCTAATCCGATGCTTCGTGCCAGCGGTGCACTGCCCTGCGGTGTCATGAGAATGGTCCGAACGTTTTGGGCAATTTCTTCCGCTATTGTTTCCGGTGCAAAATCTATGTTTGACTGCTGGGTAGTATCTACGGTATAGATCACTTTACATATTCCTCCAATGTAAGATCAACTTTTGCCACACGGACATTCCCCCTGTTGTCAAGCTGCTCCCAGGCTTGTGTCATATTAGTGATCACCCATAGCCCTGTTCCTACACCCTTATTTCCGATAACCAAAGGGAGTGCTCGGCCGGCCCGTTCCAGCTCTGTTAACCTGTCCACTGCTTTCCTGGGGTTGAGGCCATGCTCCCAAGAAAAGCGTATAGAAAAGGTCACTGTGTCCACTCCAGGTCCCAGCCACTCTTTTTTAGGCTTTTGCCCGATAATATCATGTTGAGCCCAGCGTCCCGCACTGCTTCGCACTAAATCCTGGAGCGTAAGAATGTATGCTTCGGAAACAGAAAATACGATAGGCCCAAGGGCGCCGACAGTATAGATATCCGCTTCTGCTTCTCCGCTCATAATACGCCTCCTGAACTTGTAACATTCCCGGTAACGGTCAAATCCCCTTCAATTTTCATACCGCCGACTGCCTTAACATTTAACATACGGGTACTGCGGTCATAAAAGACAAAGCTGCCATCCTCAAACCACACACCCTGTTGATGGACATCACCAGGCGGAGCATCCTCTGAACCATAGTAGGTCCCCAAGCAAAAACCTGCAGAGCGGTCATTATCCAAAAATGCACAAAGAACGGTATCCCCGGGTTCCGGAAAAGCATTTGTACGTGCCCATCCTCCTGGTGTAATAACCAGCAACGGTGCTGACACCATATTGTCCCGGTCAGGAAAGGTAACCCGCACGCTGCCGGATCCCGGGTCTGCCGTAGAAACTTGTCCAATAAAGTTCATGATTACCACCCTAATACCTTTCTTATTTCCAAATCAGTTGTATAGCCTCCGCTTCCGATAACATGTCTCGCAGACTCAATAATGTATTTGCCGTCGAATCGCTTCCAGCCCACTATATTAATAGTCAAGCCAGCTGCCATGCGGATATCTCCCATGAGAGATAATGAGCCTTTTCCGCCTTCTTTATTGCGCTCCCTTAGCCTTTTACGAGCCAGCTGTATGGCCGCAGCTTGATCATCTACCTGTTCGTTTATCTTTAGTATAGGACCAGTCTTCGGAGCACCAACAGGTGTGTACGTTGCTTGTACCGGCTCCTTGCTTTTAGGTGGTGTATACGTAATCGTACAGGCACGGTATGCCGAGTATGCCGTATTGATTGAAAATCCATACCCCTTCACATTGTCCTCACCACGTGTTATAGTCGCGATTGGTAGCTTTTTTTCATATACAGATTCGTCAAACATTACCAGAGTACCGTTTGAAACTTTAATGGCAATCCCTTCCCTGGTCGCTGTCTCCAATAAAAAGCTTAAATCTGATTGCTCTGTCTGTTCCAAATGATCATATGAGGGGTTATCTTCAGCCCTATAAAGCAGCTTTAGCTTTGCCCGTTTGGCTACCTCAGCAGCAACCGTATTTAGATTCGTTTTCTCCCAGGCTCGCGAGCTTTGCTGCATTCGAATTTCCGAACTGATTGGAAGCGACACTGCCTTTATTGCCACCGTATCCGGCGGACCGTTAAATTCAATGCTGTCTACTTCAAATGTCCCAAGTGGCAGCTTCTTAATTTCATTTGCCGCATCCCAATTTATAGTACGTATTGTGGCATGAATTCGATCCCCTTCGCTTGGAACCCAGGCCCCCTGCCAATTACGCCCTGTATCCTCCAGTGAGATAGAAATGTCATCAAGTGAACCGGAAGCGGCATCGTTGTACTGAAAACCTGTCAGCGATTTTGCAATATCCTTGCTTACATCCTTTCCGTTATACTGAAGTACCAGCATTGCCCTTCGGGCGTTTTGGGGCAAATCCAAGGTTAATCCTCCCTTCGCCAAGGCGGAAGCATATCTGAAGTGATGACTGGCTTATCAGGCACGTTTATGGCAATATTTCTAGAAAAGATGACTGTTGCCGCATGGTTGGGATTTGCATTCATGAGCATTGTCATTAATTGCTCGTCTCCATACACCTGAAAGGCGACACTATCCCAAGTGTCACCTTGTACTGTCCTGTAGATCATTAGAAACTCACCCGCCTTTGCTGCTGGATCATTTGCTGAAACCGTTGTTCAAATGCCGGTTGTTGATCCTGGATGGCCTTGGCTACTTCAGCCGCAATAGACGGCGTCCCTCCTTGAATCGTAACTTGTGGCGCCCAGTTGACCTGTATATTCCCCTCCGTTAAGCTGGTTGAACTGGTGTAACCCATTAAGTCATTTGCTTTATCCAGAAGGGAGCGGGAACGCGGCTTCTGATTGAGTGGAATTGCAATTTCAGGGCCTGCTTCTCCGAATATAGAAGGACGTAAAGCTATGCCTCCATCCTCAAAACCCGCATAACCCTCAAAACCAGGATCACGTAGCTGCAAACGGTGTTGCTCTCGACCGGATACCGTTCTTAGATCGGGTGAACCGTTTTTCTTTGCAAACTTGTCAATTTTCTGTGGGAATTGCCCTGTTTGCCCCCATATCAGCATAACATTTATCTTTTTATCACTGGGCATCATGGACAATGCCGCGTTCAGTTCCGAAACATCCTCCATCGCTTGCTGAAATTGCAGCTTTTGAGCATCAGATAATGTCTTATACTTGGCTGCCTGCTCCTCCAGAGTTCCCCCAAGCTTCTTTTCAATTAAACTTTTTTTATTGTCATAAAGAGTTTCATAAGTGTCTTGGGCAATTACCTGCTTTTCCAAAATACTCTGAAGTTCTTCTGAGCCTTTGTCTCGCTTCTCTTTTATTGTTTTTATTGCATTTTTAAGACCAGGTAGCCGATTTATATCATCAAAATTAGCACTAGTACCTTCTACATTAAATCCTACCTCACCAGTTATTGTATTGACCTTTTGACGCAGTTCCTCAAGCTGTTCATTTTTTTTATCCGAGTTAGGGAGTTGCATTAACCGTTCATACTCCGCTTCGAATTTTTTAAGGTCGGAAATTGCAGGATCAAGCATATCCTTCTTCATGGCCAAATTTTGGGAACTGTTTTGAAGTTCAGTCATCTCTTTTTCAAGCTCAGGAAGATTGTCTTCAGTCTCGTATATTTTGTTCTCAAGGGTGATTTTCGCCAAGTCCTTCTCTGCATCGCTTTCCTGCTTCATAAGGTCCAGCTTCTCTTCAATCTTCCCATTCTCAATATCGTATTGACTTATTGTCTTAGGATGTAGCTCCTGCAGTTTGGTAGTCACTTCACGTAAACGCTCCTGTTGTCTGGCTAAAGTTTCTGTATTTTTAGCCAATCCTTCTGAACTGGTTGAGCTCTCTTTTATTTTTTCATTCAAATGCCGATATTCCCAGACAAGGTCATTGGTGAGTTTCGCCTTTCCTTGTGCTGCTTCATATTTCTCTCCAGCTTCGTCCAGTGCATCGCCCATGTGCAGTAATTCCTGCCGGGCATTTTCCTGATGATGTTTATAAGCGACCACCCCAGCTGTCACTAATCCCAGTGCACCCACAGCAATCCCCACTGGATTCGTCAGCAGTCCCAGCGCTCCGGCAAACCCGCCAGCCGCTCCGCCTGCACCGCCAGCAGCACTTCCGATTTTCAGGAATCCCTGAACAATCTTGAGAGTATTCACTCCAATTGCCGCCGCGGGAGCTCCAAGGCCAATGACCATCATGAGCTCTTTATTGTTCCCCATCCATTGAACCAGACCCTGAAGCAGCGGCATCAACTTCTCTCCAAGCGGAACGATCAGTTCGGTCATCATTTCACGGCCGACTGCCTGGAACTGCTGTGTCAACGTACTGTATTTTACAGCAGCAACTTCTTCCATAGTCTGCTTGGTCATGTCGAATTGACTTCGGGTGCTCCCGAGCGCAAGAATGGCTTCGCTGCCAATAGCCGAGAACTGACTGCCGAATAGCTCTCCAGCAAGTTGTGCTTGTTTTACTGGATCTTTAATTTCTTTTAGTTTCTGAATCACTTGCTCCATCGCTTGCTTGCCGGTAAGTGAACCGTTCGACAGCCCCTTGAAAATCTTCTCTCCGCTGCCAAGTGTCTTCTGCAGCTCCAGCATGGCTTTCTTCGCGGAATCTCCGCCCGCTTTTAAATCTTTTGTCAGGGTGTCAGCTACAGTCTTTCCCGCCACTTTCAGAAGTTGGGCGTATTCAGCCGAACCTGCACCGCCCTTTACAAGCGCTGCGCTGAACTTGTCCAACTGCTCTGGCGCAAACAATTCGTATATAGAGGCGCTTACTGAGTCAGAGTCACTCATTATTGCTGTACTGAACTCTTTCACAGCATCTGCTACACCTCCAAGCGAAGAGGCCCCATTTTCGATCCCTGCACTGAAGAGGCTGAACATCTCATTGGCTGAATAGCCCATTTTGTCAAAATACACACTATACTCACTTGTCGTATCAAGTAGTTCATCAGATCGGTCCAAGCCCTTCTGTGCTCCTTGAGCCATCAAGTTATAAGCTTGCTCGGAGTTAATACCAAACCGCTGCATCATCGCATCCACTGCTTTCAGAGAATCAGGCAGCTCTCCTTTAAAAACATCCCGGTAGGTAATCGCATTCTCCGTAGTTTTCTCAAGCTCATCCCCACTTTGCTGCAATACTTTTTTAACCAGCGCCAGAGAGTCACCTAAATCCTCAAAGCCTTTACCATAGTTCTGGCGATAGAGACTGTTAGAGATTTCTTCCATATCCTCCATCTGCTCTGTTGTCATTCCTGTTGATGCCTGCAATTGGGCCATAGCATCAGCGGATTCATTGATTCCGCTCATAATTTTCTTAAGCGGTTCGATACCTGATTTCAATTCAGAGAATAGTTCCTTCTGTCCCTTCATGCCTTCCAAAATGCGGCCAAGTTTAGAAGCACTCTCGCCTAATTCTCCAACTGAATCTTCCGCCGCGTCCGCATCTCGCCGCACATTATCAAAACCTGAAATTCGTGATAACTCCCGAAGAACCCTTGCAACATCTTCTATACTGTCCTCTGCTTCTCCCACCGATCGGCGAAAGGAGGCAGATACAACGGCATTCAATTGATAAACAATATTATAACTATTAATTGCACCACTCGACCCTGCCACGAATTATTTCCTCCTTCCCTTAATCCGGGTAACCCGCTCCACCCATTCCGCCATTTCGCAAAGGGGCAGCGAAAGAAAATACGGAATGGGTGTGTAGGTAAACATGGCCAGAAGGGCGGCGAGATCCTTGACCTCCTCGCCACCCCCACAGCCTACAGCAGCAAAAAACTTTGTGCCCGCAAAGTCAGCCTAGTGAAATCCTTTGCCGGAAGCGCGCGGATTAATCCGACATGAACGCCGGCGGCCTTTGCTACAATGTAGGCCTGATAGGCTTTATTCGTCTCCTTAACCAATTCAGTGCCACCGTGTCTTGCCGCTTCAGCTTGGTATTGACGGTCACAGGCAAGAATATCCACGCCGGTCAACTTGTCGAAATCAATGGTCAAAGTTTCTACAGTATTTCCTTCAAAAGTGACAGGCCGGGCGAAAGTATATACTTCCGCCAAGTCCTCCTCGATTATTTCATTTTCCATTGTTTAGCCCTCCCTTATCACAACGCCAAATTTCTTTTAGTAATTTCAAGATAATCTTTGTCAAACACTCTGTGGACATAGTTATATTTGTCGATCTCCAATATACGCTCACCGTTGAGTTCCACCATCAGATAACTAACCGAGAAATTATTCGTAGTCTCCATAGTTGTCGCAGGTTCAAGATTGCCTAGTGACAGCCCCAGTGGTCTTGCACGTACTGTGATCTTTAGCGCGGATTCATTATATTCAGCAGTGGAGGTATTAAACGTCTGAATTGATGCGCGCAGGGTTAGCATATGAACCTTAGGAGCCATTAGTTCAACTGCTTCCTTTTCCATCGTACGCCATTTGAGGGACAGATTCATTACACCGGTATGTCCTGGAGAAGGAGCCTCTATTTCGCCCGAGATTCCTCCACCTTTGATTGTTTCCACCAGATAAGTAATCTCTGGCAACGTAGCAGTAGCTGTACCCAAATATCTATCCTGATCACTCAAGAAAACTGAATAATCGATAATACGTTCTGATCTATTAGGCATGTTTTTCCTCCTTTAGGCTGTCAATGCAGCCAAATAAGTTGTGTCGTATTCAAGCAGGAATGAGATCTCCTGTGCAGGACCTGGTGGAGTGATATATAAATGGAAAGTAATTTTACCGGACATCAGGTCCGTGGCCTGATTTTCGGAAGCATTAAATTCCACACGACCGCCAAGCAGCGCACCGGATGCCACGAGACCGTTCAGCCAAATATTTACCGAGTCCGTGACTGCAGCGATCAACCGCTTGTTCATCGGATCATCAACCTTTTGCATATAGGTCAGAATCAAGCTGTTCCCGATCCAATTAAACATACGGCGAGCCGGAATAAAGCTGTCTTTCGGATCGGTCGTCCCCGGGAACGAACCTGTGTTGTTCCCCCAGGCTTTCCATCCGCTCGTGCCAAGATTAAGGGCAGTCATAATTCCGAGACTGTTCATATAGCTCACTTGATCGATCCCTAAATACAAGCTCGTCCCATTGGAAAGTGCAGTACCATCGGCTTGAAGTGCTTTATTAGATGGCGATACAAAAGGTACTCCGCCGTAGCTCGCATCTGTTGCTGCGATTAGTCCTGCCAGCTGTGTAGAAAAATGATACTGCTTATCTCCCATTGTAAGCATGGGGTAGGAGGCAATTTGGAGAGTTCCATTATAGCTATTCACAGACTTCCAGGTTCCGGCATCGCTATAAGCCTGAGCCGGATCAATATCTGTCAGCGCCATTGCCTTGAAGTTGCCGTTAATGTTGCTGGCTTTGGCTCTCATAACTGCTGCTACTGAAGGGAAATGAGACCATCCAGGTGCAAGCAGTAAATCTGGGAGAATCCCGAAACGCGGATACACTTGGTTAATCAACTCAAAGCCGGTGTATTCCCCAGATGATGTAAGACCACCGATCACATCAACCAAGTCTACGGCACTTGGATTAATCCGGTCATACCCTACAGAGAGCTGTGCTACATTAGCTGAAATGTTTCCACCAGCTTTCACCGAGATCACTACATGGCCGTTATCATTAAATGCGGCATTAAAGTCGACACCAGCTACGTATGTTGATGTTCCGTCAGACGATTTGACTGTGAGCGTTGGCAACAGTATCCCCTCAGACGTCAGCGTAACTGTACGGTTATTTACAGTGACCGCCTCCGGTGGCACCGTCGTCTTATGCACAGCGGGATCCAGGACATTAACCATAATCAACGGGGCTTTCTTGTATAACACGAAATGTGAGTAGATAAGTTCGCAAAGAGTATAGTTCTTCCAATCATCGCTATAGCCAAGTGCGGCTACAGCCTCAGCATAAGTATAAGCCAGTACTGGAGTATTCACCGGTGCAGCTGTCGAAGCCAGATTAACAGGAGCCGTCCCTACTGCAAACGGAATTCCGCTCATTGCCTCTGTGGGTGCCAGGACTGATGTTGGTTGTTCGATAATTGTTACACCATGTTTATAGGCCATTAATTAATTCCCCTTTCCTAAAAGCCTTTGATATGCTGCATACTCTGCTGTACCGGACTGAACAATACGTTCCTGCACTGCATTCATCCCATTAACCGGTACGATAAGTTCTTCTACATCCGGCTGTTCCGCAATCAGTGGCTGCAAATAAGCAGGAATACCGGTCCGAAAGACAGTTGACTGCAGCAAGCGTCCACCCGGCAAGTTCGGACCAAGATAGATTTTTACTGAATCCAAATTTTCTTTCACCGTTACCACTTGCTCCTCCTGCAATTTAACATTATTTTTAGTTCGACTCATATTTTTACCTCCCGTTTAATTTGCGGTAAAGTCCATGTGGTAATGACTTCACCAACCCATTCGAGCATTGGCTGTTCCTCAATAAGTTTCCATTTCCAGCTATCATTAATAGCGAATTTCTTTTCCAGGATACCTTGCCGCATAAGCAGTATACGTACCCGCTCCATCAGGTTTAATAAATCAATAAATCCTGAATTATCCCGCGGCCGAGTCCTAAAAAGAAGTTTAATCTGGGATTGTATATTATCCTTACCTCCCTCCCCCTCAAATGGTCGGATGATAATGAACGGATATTCGGGATCCTCCTGACTATCTGCAGAATTCGGCGGCAAATCACCTAAATATACATTTGGAACCGCAAATGCATCATCAACCAGCTCATTTTCCAAAAAGGTTTGAATCGCCTTGATCAACAAAAATATCGTCACATCATTTCCCCTTTCGGTAAACACTTCCACTCATAAGCACTGCCCGATTATTATGAATTTATTTTCATACCCTTTAGAACAGATTAGCTTTAGTAGTCATATCAACTTCCACCTCCTTACCAGCCAAGCCGGTTAAGCACATGCTTTAAAATGTCTTTCTATACATACAGGGCATTTGCTAGACAAACTCTCTTATTTCATTAACAAGAGGGCTTATTTTTCTTTGAGCCCGTTGAATGTACTCACTTACGCTACCGGCTGAAATTCCAAGCATCTCAGCTATACAAGCATGGGAAAATCCTTCTCCATGCGCCATCATATAGCATTCTCGCTCCCTTTTACTCAATGGCTCTAAAGCAAAATCAAGCAATGAACGCCGATCATCTGTAATCGAATCACTTCGATTAATAGCATCGCTACTGGTAAACAACTGCATTCGTAACGGTTCCAGTAATATTTCACGTTCATATCCGGCACGACGCTCTATCCCCCTTCTATTTCCCGGACGCCTACCTGTGGTCAGCCACTCAATAATGTATTTGCAGTCACTGACCATTCCAGAAATGATTTTCCGGTCATCAGCATCAGCGTTCACATAAGCACATTCGGCTACCTTCAAAGTATCCTGATAATCTGAAAGCATGCCCTCAAGTTCCCTGGTATACGGCAGGGCTGGTTTTTCAGTCCGTACTGTAGTCATCCTTATGCTCCTTTTGTGAGGGGAATTAATCATATTATGTATTAGTAACGTTGTTATACGAATCAATTAAGCACTTATCATTGTATAAATGCGCTTTGTTCATATATCAAACAATTTAAATAAATATGATTCCCAATACTCAATATCGTATTTTTTATCAATGGTATACTCATTTTCGTATTTAGTCAATTGATTATTGCGAATAAATACGATATTGAGCATTTACTTGCAAAAAAAAAACCTCTATAATGAAATACATCTTAGTAGAAAGAACATTCTGATGATATGAGGAGGACTTGACAGTGCGGAGGGCTGAAGTCTTAAAGAAACTGATCGAGGAAACCGGCCTGAACACAAAAGCATTTGCTGAGAAAGCGGGGATTCCTTATACTACGCTCAGATCAATGTTAATGCGCGGGGTAGGTGGTGCTTCAGTAGATAATGTCATCAAAGTATGCCGTGCTCTAGGAATTACAACTGAAGAAATGGATCGTTTGGCATTTAGACCTGATGAAGAAGTTGTTTCCCACTCGATTCACGAGCTTGCTGAGTTTGAAGCTTTTATTAACAATCCTGAACACAGCCTATTCTTTAAAGACTACCTGGGTGCTCCAGAAGAAAGAAAACGGGAAATGCTTACCTTCTGGAATTTTATTAAGGACCTGGAGAAGAAAAAAACAAATGATCAGTAATAACAACTAATACACATAATCGTGGTGCCAGCCGACGAGCTGGTTTCACGCATCCATATATACGAACATACATTCTCATAACGGAGGCCCATTATGTTTATACATTACAAAAAAACTCATTTAGAGCAATTCATTGAACATATTTATTTAGATCACCACATTACGAGCCCAGAGCAAATTACAATTCATGATCTTTCCATTGAACTAAATATAAATGTACAATATTCCCCTATCAGTAGCCGTGCTTATGAGTCAGTCTCAGGTATGCGATGTATTCTTCTGGATAGCCGGATATCTCCAATCAGACAACGCTTTGATTTCTTACATGAGCTCTGTCACATGCTTCGCCACGTTGGTAATCAGATCGTACTTCCCAATCAATTTGTTAAAGCTCAGGAAGAAGACGCTCACAAATTTGTACTCTATGCGACAATGCCGTATTTCATGATAAGAGCATACGTTTTATCAGATGATTACAATCAGGCAATCCATCAACTCTCGAGCATCTTCGGAGTCCCTAGAGAAATGGCTAAGTTAAGGTTTGATCAAATCTTACGCCGTGAATATGAAGGCGAATTATTATCCGGCAGAACATTGCATAATAAATTCAAGAAAAGCCCAAACACACACAGCAATCATGTTAAAGAGACAAAAGTATTGGCGTATTATGACCCCTACAGCAATTTTGATGGGCCAGACCAACTAATTGTTTGTTTAGATTATAAGACTTTAACTACACAATATGAAATTGTTATTCCTATGGATGAACGGTTTCAAGAAATTGAACTAGAGGCCTTAAATGATATCGTTGTGGAATCAACAATAAGCGGAGACTTAATTTGTTTCGATGGACAATTAACACTCCAAGTGCACCAACTTGTCTACAGGTGTGGATATTCCAAAAGAAATTTTGTACTTCATATGAGGGATATCGTTCAACTCCTCGAAACAGATCGAAGATCTTTAGAGAAGTTTAATTAG

Protein sequences of DBSCAN-SWA_10

>NZ_CP009241|6894158:6913707|6905112_6908136_-|WP_038597009.1|DBSCAN-SWA
MAGSSGAINSYNIVYQLNAVVSASFRRSVGEAEDSIEDVARVLRELSRISGFDNVRRDADAAEDSVGELGESASKLGRILEGMKGQKELFSELKSGIEPLKKIMSGINESADAMAQLQASTGMTTEQMEDMEEISNSLYRQNYGKGFEDLGDSLALVKKVLQQSGDELEKTTENAITYRDVFKGELPDSLKAVDAMMQRFGINSEQAYNLMAQGAQKGLDRSDELLDTTSEYSVYFDKMGYSANEMFSLFSAGIENGASSLGGVADAVKEFSTAIMSDSDSVSASIYELFAPEQLDKFSAALVKGGAGSAEYAQLLKVAGKTVADTLTKDLKAGGDSAKKAMLELQKTLGSGEKIFKGLSNGSLTGKQAMEQVIQKLKEIKDPVKQAQLAGELFGSQFSAIGSEAILALGSTRSQFDMTKQTMEEVAAVKYSTLTQQFQAVGREMMTELIVPLGEKLMPLLQGLVQWMGNNKELMMVIGLGAPAAAIGVNTLKIVQGFLKIGSAAGGAGGAAGGFAGALGLLTNPVGIAVGALGLVTAGVVAYKHHQENARQELLHMGDALDEAGEKYEAAQGKAKLTNDLVWEYRHLNEKIKESSTSSEGLAKNTETLARQQERLREVTTKLQELHPKTISQYDIENGKIEEKLDLMKQESDAEKDLAKITLENKIYETEDNLPELEKEMTELQNSSQNLAMKKDMLDPAISDLKKFEAEYERLMQLPNSDKKNEQLEELRQKVNTITGEVGFNVEGTSANFDDINRLPGLKNAIKTIKEKRDKGSEELQSILEKQVIAQDTYETLYDNKKSLIEKKLGGTLEEQAAKYKTLSDAQKLQFQQAMEDVSELNAALSMMPSDKKINVMLIWGQTGQFPQKIDKFAKKNGSPDLRTVSGREQHRLQLRDPGFEGYAGFEDGGIALRPSIFGEAGPEIAIPLNQKPRSRSLLDKANDLMGYTSSTSLTEGNIQVNWAPQVTIQGGTPSIAAEVAKAIQDQQPAFEQRFQQMIQQQRRVSF
>NZ_CP009241|6894158:6913707|6894373_6895081_-|WP_156130968.1|DBSCAN-SWA
MMRTLEQVKLKSHKRLIGLHPVVVAATLALIERSYARGVNIVITQGLRSIEEQDALYAQGRTKPGAIVTNAKGGTSYHNFGLAVDFALLLPDGKQVSWDLKRDGDADGMRDWTEVVQGAKALGLEWGGDFVSIKDAPHFQMTFCLTTSQLRAGKEPTASQVAAAYIKIGKCTKEDSEVKKDVIVSVIVDGQKVADGVADEGVTYTPARAIAEALGAIVSYDAKNKTVTINSKEAK
>NZ_CP009241|6894158:6913707|6895089_6895491_-|WP_038596991.1|DBSCAN-SWA
MADGVADVRGGVEDVMPLQQRLEEVEVGLNTLTSEFARIAAENVTANTKLRLLEENDHRHDESIKEIKSSTIKMEIQFSAIMAKFDSLESKIFSLLQQANKDSGAERKLWMDMIKYIVLIALGAAAGNQFLGK
>NZ_CP009241|6894158:6913707|6903058_6903457_-|WP_156131048.1|DBSCAN-SWA
MYTVGALGPIVFSVSEAYILTLQDLVRSSAGRWAQHDIIGQKPKKEWLGPGVDTVTFSIRFSWEHGLNPRKAVDRLTELERAGRALPLVIGNKGVGTGLWVITNMTQAWEQLDNRGNVRVAKVDLTLEEYVK
>NZ_CP009241|6894158:6913707|6909160_6910606_-|WP_038597013.1|tail|DBSCAN-SWA
MAYKHGVTIIEQPTSVLAPTEAMSGIPFAVGTAPVNLASTAAPVNTPVLAYTYAEAVAALGYSDDWKNYTLCELIYSHFVLYKKAPLIMVNVLDPAVHKTTVPPEAVTVNNRTVTLTSEGILLPTLTVKSSDGTSTYVAGVDFNAAFNDNGHVVISVKAGGNISANVAQLSVGYDRINPSAVDLVDVIGGLTSSGEYTGFELINQVYPRFGILPDLLLAPGWSHFPSVAAVMRAKASNINGNFKAMALTDIDPAQAYSDAGTWKSVNSYNGTLQIASYPMLTMGDKQYHFSTQLAGLIAATDASYGGVPFVSPSNKALQADGTALSNGTSLYLGIDQVSYMNSLGIMTALNLGTSGWKAWGNNTGSFPGTTDPKDSFIPARRMFNWIGNSLILTYMQKVDDPMNKRLIAAVTDSVNIWLNGLVASGALLGGRVEFNASENQATDLMSGKITFHLYITPPGPAQEISFLLEYDTTYLAALTA
>NZ_CP009241|6894158:6913707|6910609_6910906_-|WP_038597016.1|DBSCAN-SWA
MSRTKNNVKLQEEQVVTVKENLDSVKIYLGPNLPGGRLLQSTVFRTGIPAYLQPLIAEQPDVEELIVPVNGMNAVQERIVQSGTAEYAAYQRLLGKGN
>NZ_CP009241|6894158:6913707|6910902_6911334_-|WP_052092341.1|DBSCAN-SWA
MTIFLLIKAIQTFLENELVDDAFAVPNVYLGDLPPNSADSQEDPEYPFIIIRPFEGEGGKDNIQSQIKLLFRTRPRDNSGFIDLLNLMERVRILLMRQGILEKKFAINDSWKWKLIEEQPMLEWVGEVITTWTLPQIKREVKI
>NZ_CP009241|6894158:6913707|6908288_6908609_-|WP_052092340.1|tail|DBSCAN-SWA
MENEIIEEDLAEVYTFARPVTFEGNTVETLTIDFDKLTGVDILACDRQYQAEAARHGGTELVKETNKAYQAYIVAKAAGVHVGLIRALPAKDFTRLTLRAQSFLLL
>NZ_CP009241|6894158:6913707|6901053_6901605_-|WP_038596998.1|tail|DBSCAN-SWA
MINIQTVSLLDLLPHSIRNDPAITAAATALDKQLQVTTDMITSLNIFSRSTEWTNEETDQLALQYRPPYYDPELSVGQKRLLVNNAISFHRHKGTAGAVESLIKILFGEGSVEEWWEYGGDPYHFRVVTNNADVTTTRAQEFIEAVNAIKRLSTVLDSVTISQAETLPLYIGGFIHVGERIII
>NZ_CP009241|6894158:6913707|6912819_6913707_+|WP_052092343.1|DBSCAN-SWA
MFIHYKKTHLEQFIEHIYLDHHITSPEQITIHDLSIELNINVQYSPISSRAYESVSGMRCILLDSRISPIRQRFDFLHELCHMLRHVGNQIVLPNQFVKAQEEDAHKFVLYATMPYFMIRAYVLSDDYNQAIHQLSSIFGVPREMAKLRFDQILRREYEGELLSGRTLHNKFKKSPNTHSNHVKETKVLAYYDPYSNFDGPDQLIVCLDYKTLTTQYEIVIPMDERFQEIELEALNDIVVESTISGDLICFDGQLTLQVHQLVYRCGYSKRNFVLHMRDIVQLLETDRRSLEKFN
>NZ_CP009241|6894158:6913707|6902729_6903062_-|WP_038597001.1|DBSCAN-SWA
MIYTVDTTQQSNIDFAPETIAEEIAQNVRTILMTPQGSAPLARSIGLDYGIVDEPYSFAKTRIISEIMSAVAEQEPRAQITDIFFKDDLIDALTGRILAVVQYSLNEEVM
>NZ_CP009241|6894158:6913707|6896388_6897123_-|WP_038596996.1|DBSCAN-SWA
MSILWIPGTANPSDVIAGRYFSSKDNYYALGTMPNRGSVTVTPGAIAQAILFGYHDGQGVVAAVTFDKTRVLVGTTIAGTAGTMPNRSAENIHMPANAFTVWSGDRVFLQPPQGYYDGSTWVTGASPGLVASNIRNGVNILGLTGTMVEGKRSASGSSANPGSSFSVSGLAFVPYAISIEYYDSTGDYIVYRGAGGKWLWASYNGGPNGSWEYGGTSNDTWTGNGFSLSNTIGTHTLTWQAWEK
>NZ_CP009241|6894158:6913707|6894158_6894377_-|WP_081966002.1|DBSCAN-SWA
MVRSKWRNYGLWVSLTAAVLLGVQTVGVIFDVQFTPEKFEEVMAAVNAVLGVLVVLGIVSNPEAGKGYTDNM
>NZ_CP009241|6894158:6913707|6911512_6912034_-|WP_081966003.1|DBSCAN-SWA
MTTVRTEKPALPYTRELEGMLSDYQDTLKVAECAYVNADADDRKIISGMVSDCKYIIEWLTTGRRPGNRRGIERRAGYEREILLEPLRMQLFTSSDAINRSDSITDDRRSLLDFALEPLSKRERECYMMAHGEGFSHACIAEMLGISAGSVSEYIQRAQRKISPLVNEIREFV
>NZ_CP009241|6894158:6913707|6904909_6905113_-|WP_038597006.1|tail|DBSCAN-SWA
MIYRTVQGDTWDSVAFQVYGDEQLMTMLMNANPNHAATVIFSRNIAINVPDKPVITSDMLPPWRRED
>NZ_CP009241|6894158:6913707|6897126_6901041_-|WP_052092339.1|DBSCAN-SWA
MAVFGGMTITTKGIALQGKAQAGAALNYTRIAVGDGTLSGQSISALNGLISQKKNLPITRLKTQLPNKAVIGAVLSNAEITTGFYFREVGVFAHDPDVGEILYAYANSGVTADYIAPADSTDIIEKSFDCIVVVGTAANITAVIDESLVYALRSDLDAVAAIKVDKVGGKQLSTEDYTTAEKAKLAGITAGAGGTGSASDTVIGNRTISDSTAPTGETGTLTTLLGWLANMIKGITGKSSWRTAPATTLEAAKVHADDATRHITAPERTTWNAKETPGGAQSKADAAKDAAINAAAQDATSKADAAESAAKNASIPTTQKGTANGVAALNEIGQVMGSGLSLGGNKLGESVFTFSFTHGVPNQKINLVHTGLTAGFVEVTVAGTWVNGNAAGKLTKRYEIITDGGGTISYQTDAYTEVTGPIQDAISISPISWDSSASTLKITIEARTSNGNDYVVSIKQMSPHGYVAWSKGTVYTGAATTLPRAVQTIPDDTVTRSGYLIQKHRLTTPTGTVINLSTGYNLNNLTVNGFFDGESFVNAPNASTDWFYIESYVHSNNQWDYRLQRATTLNGTPARKPTTFERIQVGGVWGNWIEVSGDSIFKTNGIVDVDYNQYTKPGIYQIYGAVPANRPPLTAPWGILNVYVGGQGYIVQEATQTTAPYGKWYRTRTETEWGPWLNVAVQNRAAIFDGVDARSAENFRLATDAPSTYPGGETIFFVNDSPGWPAVYGTVASVRGNNRVGATAVTQYFYPYNISAPIKYRQALYGSDAWGAWDTLLTGAAAQGFAKAGKYVTFGGTDTGVTTPEFITMLKNMGAHSPEGGYWVGRGDWSYAYNVHITDTGLGLIHLAGAVVEVIGSLLADNYTIRITTPTTNAVDADTNSSEFIYANNGPQYYPAWRKSLNSANTSGLFGVGQTVGDANALVHNGSYVVAASWTGSLWAGTDGNNQGYLTHTSWNADNSYAMQTFMPINATDVGRTGMWYRRKELNVWGTWTRIWSSANDVGFFKERGVVPAGSDLNDYHGNGSYMLLSDYYASYVHRPPTDSYYVLSVSRSQGSGGFVKQTATQVFGSFEYYRTRTDQGLWSSWVEVMTSESGNSFVKRGAPSAGENLNNKTALGMYTLATSASYVNGPGMDWCVLLVYANASGYLVQEAINVGNSTPMRRFRTRSDGNYWSRWTDVVTTDATGKIPGVAANRVVAKEAPLSTTSETLVAYYEVPIEANAVITVKSALTLHNSATVKISVKYTDTNSIAREYVILPSTAMGGGRYTFIAPTLNCNAGTWVNVAVVTSVPSVTWVTAVITQEG
>NZ_CP009241|6894158:6913707|6908626_6909148_-|WP_038597011.1|tail|DBSCAN-SWA
MPNRSERIIDYSVFLSDQDRYLGTATATLPEITYLVETIKGGGISGEIEAPSPGHTGVMNLSLKWRTMEKEAVELMAPKVHMLTLRASIQTFNTSTAEYNESALKITVRARPLGLSLGNLEPATTMETTNNFSVSYLMVELNGERILEIDKYNYVHRVFDKDYLEITKRNLAL
>NZ_CP009241|6894158:6913707|6903477_6903873_-|WP_038597004.1|DBSCAN-SWA
MNFIGQVSTADPGSGSVRVTFPDRDNMVSAPLLVITPGGWARTNAFPEPGDTVLCAFLDNDRSAGFCLGTYYGSEDAPPGDVHQQGVWFEDGSFVFYDRSTRMLNVKAVGGMKIEGDLTVTGNVTSSGGVL
>NZ_CP009241|6894158:6913707|6903875_6904877_-|WP_038600902.1|DBSCAN-SWA
MLVLQYNGKDVSKDIAKSLTGFQYNDAASGSLDDISISLEDTGRNWQGAWVPSEGDRIHATIRTINWDAANEIKKLPLGTFEVDSIEFNGPPDTVAIKAVSLPISSEIRMQQSSRAWEKTNLNTVAAEVAKRAKLKLLYRAEDNPSYDHLEQTEQSDLSFLLETATREGIAIKVSNGTLVMFDESVYEKKLPIATITRGEDNVKGYGFSINTAYSAYRACTITYTPPKSKEPVQATYTPVGAPKTGPILKINEQVDDQAAAIQLARKRLRERNKEGGKGSLSLMGDIRMAAGLTINIVGWKRFDGKYIIESARHVIGSGGYTTDLEIRKVLGW
>NZ_CP009241|6894158:6913707|6901597_6902710_-|WP_052092724.1|plate|DBSCAN-SWA
MPEIQFVAEEAADIQRNVIAIYEGLTGRTLQPADPVRLFLSSLAVLIVQQRVLINQTAKGNLLRYASGVLLDHMGAFQGSERLPASSAITTLQFTLSIPLLAVTSIPAGTRVGILGGDGSIYFATTEYVEIPAGATTGTVTAICSSLGTGGNGFLPGQINVLMDQLPFVQSVINSTISSGGSAEETDEAFRDRIRAAPDSYSTAGPQGAYEFWAKSTSAAILDVHAYSPDDGKVTIVPLLIGGQIPGQDILDAVSEILDDRGIRPLTDQVKVIAPTPESYNTTVTYYISRSRASEVSSIQAAVTTAIADYQLWQKSKLGRHINPSELITRVMEAGALRVVPTAPVYTALTMTQIAQEGTTTITYGGLVDD

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_081966002.1|6894158_6894377_-	hypothetical protein	R9TLP0	Paenibacillus_phage	2.8e-14	55.9
WP_156130968.1|6894373_6895081_-	hypothetical protein	A0A127AWA8	Bacillus_phage	2.1e-39	55.6
WP_038596991.1|6895089_6895491_-	hypothetical protein	NA	NA	NA	NA
WP_038596996.1|6896388_6897123_-	hypothetical protein	S6B1J7	Thermus_phage	1.1e-25	40.6
WP_052092339.1|6897126_6901041_-	hypothetical protein	A0A0C5AEQ0	Bacteriophage	2.0e-46	60.5
WP_038596998.1|6901053_6901605_-|tail	phage tail protein I	A0A0C5AJ63	Bacteriophage	4.0e-49	53.0
WP_052092724.1|6901597_6902710_-|plate	baseplate J/gp47 family protein	A0A0C5AEG2	Bacteriophage	1.8e-109	55.3
WP_038597001.1|6902729_6903062_-	hypothetical protein	NA	NA	NA	NA
WP_156131048.1|6903058_6903457_-	hypothetical protein	A0A0C5AN08	Bacteriophage	1.0e-30	46.5
WP_038597004.1|6903477_6903873_-	hypothetical protein	NA	NA	NA	NA
WP_038600902.1|6903875_6904877_-	phage late control protein	A0A0C5AJ59	Bacteriophage	5.1e-103	53.3
WP_038597006.1|6904909_6905113_-|tail	tail protein	A0A0C5AEF4	Bacteriophage	9.8e-14	50.8
WP_038597009.1|6905112_6908136_-	hypothetical protein	M4ZR40	Bacillus_phage	1.1e-20	27.6
WP_052092340.1|6908288_6908609_-|tail	phage tail assembly protein	A0A0C5AEP1	Bacteriophage	1.1e-14	45.6
WP_038597011.1|6908626_6909148_-|tail	phage major tail tube protein	A0A2K9V461	Faecalibacterium_phage	4.6e-15	28.9
WP_038597013.1|6909160_6910606_-|tail	phage tail sheath family protein	A0A059WKP9	Vibrio_phage	3.6e-134	50.6
WP_038597016.1|6910609_6910906_-	hypothetical protein	NA	NA	NA	NA
WP_052092341.1|6910902_6911334_-	hypothetical protein	A0A0C5AN06	Bacteriophage	1.2e-21	38.2
WP_081966003.1|6911512_6912034_-	hypothetical protein	A0A0K2CNQ1	Brevibacillus_phage	1.8e-27	42.6
WP_052092343.1|6912819_6913707_+	ImmA/IrrE family metallo-endopeptidase	A0A2H4JA43	uncultured_Caudovirales_phage	3.1e-11	26.5

Sequences of DBSCAN-SWA_11

Nucleotide sequences of DBSCAN-SWA_11

>NZ_CP009241|7012528:7019414|DBSCAN-SWA
TCTATTTCAGTTCCAGCAAAAAGTCCCTCAGTCCGGCCCGCCAAGGCCGGATATCTTCAAACCCGTTCGTGCGGATGGCTAAATGCTCCATTACCGAATTGCGCGGACGTGGCGCCGGGCGTGGAAACTGTTCTGTAGCACATGGCTCTAGCTTTGCTGTGAATTTCAGACCCAGAATATCTTCTGCCTCAGCGAAAATTGCCTGTGTAAACTCATACCAGGTGCAGGACTCACTGTTAGAGGCATGATAAATTCCATACTTCTCCGTTTGAATCAGCTCAAGCAGGAAACGGGCCAAATCTACCGTGTAGGTAGGTGAGCCTTGCTGGTCGTCTACCACCTGCAGCAGCGGCTTCTCCTGTCCCAGCTTCAGCATCGTTTTCACGAAGTTGTTGCCATACTTGCCATACACCCATGATGTACGTACGATAAAAAATTTCGAGGACAAAGACTGCACTAGGATTTCTCCTGCCCGCTTTGACTTGCCATAAATACTTTGCGGATCCGTATTATCATATTCATGATAAGGCTGAGTTCCCATGCCATCAAAAACATAATCCGTACTAATGTATACCAGCTTGGCTCCGGACTTCTCCGCAGCCAGTGCTACATTGCGGCTTCCGGTGGCATTAATCAAATAGGCGGCATCCACATCGGTTTCCGCAATATCCACCGCCGTATGGGCGGCACAATGAATGACAGCATCCGGACTGAACCCGCTGATAACCTCAGTACATTGATCAAGATCTGTAATATCCATCTCCTGACGGTCACAGCCTAGAACCTCATGTCCTTGCTCCTGCAACAAAAGTACAAGGTCCTGCCCCAACTGTCCAGCGGAACCCGTAACCAATACTTTCATCTTCGACATTACAGGGAATCCCCCAAACGGCTGCCATACTGAAGTTCGGCATATTTCTGGTATTCACCGGATTGAATACGGGTCCACCACTCTTTATTATTCAAATACCATTGAATGGTTTCTTTAATGCCGGTTTCAAATGTATGCTTTGGCTTCCAACCCAACTCGTTCGTAATCTTGGTTGGGTCGATGCCATAGCGGCGGTCATGTCCGGGACGATCCTGCACGTAAGTAATCAGAGAATCCGGTTTGCCCAGTTCCTGCAGCACAGTGTTCACTATATGCACATTTGTGCGCTCATTATTGCCGCCAATATTATAGACCTCACCGTTTACCCCTTCGTGAATAACCAGATCAATTGCGCTGCAGTGATCTTCTACATACAACCAGTCACGGATGTTCATTCCATCACCATAAACCGGCAGTGCCTGGTCAGCAAGCGCACGGGAAATCATAAGCGGAATCAGCTTCTCCGGAAATTGGTATGGCCCGTAGTTGTTAGAACAGCGGGTGATATTAACCGGCAATCCAAAGGTTTCGTGGTAGGCGCGCACAAGTAAATCTCCGCCTGCTTTGCTGGCGGAATAAGGACTGTTTGGAGTAAGTGGAGTTTCTTCAGTAAAGAGTCCCGTAGCTCCTAACGTTCCATACACCTCATCTGTAGACACTTGAACAAATTTGGTCACACTATATTTCTTTGCTGCATCCAGCAGCACCTGTGTGCCGAGCACATTTGTCTTCACAAACACATCCGGCTCCAGAATACTCCGGTCCACATGTGATTCCGCCGCGAAGTTGACTACGATATCGACTCCCTGGCTGAACAGTGTGTCCATCGCCTCCACATCCGTAATGTCCGCTTTGGCAAACGTATAATTCGGATTGCCCTCCACCGACTTCAAATTCTCCAAATTCCCCGCATACGTCAACGCATCCACGTTCACGATCTGGTAATCCGGGTGCTGCTGCAGCATGTATATTACAAAATTGCTGCCGATAAATCCGGCCCCGCCGGTAACGAGCAGTTTCATATGTTAGCCCACCTTTTATTCATTGAATAGTATTTAATCGAAATTGAGCTCTGCATCCTTAAGCAAAGGATGGCGCCCATCTTTGTCCGACAGGACTGGAGTTGACACCGGCCAGTCAATGCCAAGTGCCGGATCATTCCATAATATGCCGCGGTCGTTCTCGGGGAATAATATTGGTCCACCTTGTATAACACTTGGGTGTTCGGCACCAGCGTACAAAACCCATGCGCAAAGCCCTTTGGCACCAGCAACTGACGTTTATTATATTCACTGAGAATTACCCCAACCCACTGTCCGAATGTTGGAGAATTACGGCGAATATCAACAATAACGTCATAAATCACACCCGATAGAACTCGAATAAGCTTGGTCTGCGCTTTCGGATTCAATTGATAGTGCAATCCTCTAAGTACTCCAACCTCAGAAGAGAGGGATTGATTGTCCTGGATGAACTTATAGTTCACTCCAGCCTTATGCATTAATTCCTCATTATAGCTCTCCATAAAAAAACCCCGGTTGTCGCCATGAACCACCGGCTCAAGGATGCATGCACCCTGTAATTGTAAGGCTGTAGCTTTCATATGATAGCGCCCTCCAAATCTATAGTTTCAATTTACCGAATTCCTCACCAAACGTAATCTCTTGAGCTAAACCGTTAGCTTTTGCCAGTGAAACATGGGTACCTGCATCCGTCCACCAACCTTGAAGAACATCGAAAGTTAATTCTCCTCGATTAATATATGCATTATTCACATCAGTAATTTCCAATTCTCCGCGCGCTGAGGGAGATATAGTTTTAATGATCTTAAACACTTCGCTATCGAACATATATATCCCTGTTACAGCATAATTGGATTTAGGAGTTGCGGGCTTTTCTTCAATCGAAACAATCCGATCACCTTCTAGTTCAGGCACACCGAATCTTGAAGGATCAATTACCTCCTGAATCAATATCTTAGCTCCAGCTTTCTGTTCACGAAAATTATCAACGAATGGTGCAATATCATCCTCAAATACATTATCTCCAAGAATAACGATCATTTGATCTTGTCCAACGAATTGCTCTGCCAAATCCAGAGCCTGAGCAATCCCACCTGCTTCATCTTGTACTTTATAGGTGAAGGTAACACCCATTTCTCTGCCACTTCCTAATAAATTCACGACGTCGCCCATGTGTTCCTTGCCTGTGACGATAAGAATATCTTTTACATCCGCCTGCTTTAATTTATAAACGGAGTGGAAGATCATCGGATATTTGCCTACAGGTAATAGATGCTTATTAGTCACTTTAGTTAAAGGGTAGAGGCGTGAACCAGTGCCCCCAGCTAGGATTATGCCTTTCAATGTCACTCAACCTTTCTTGCGCTTAGTCCTTGAATTAAAGGCGTACTATTAGAGAAACATAAAGATGCTACGAATGCAAGTTTACCAAAGACCGAGAACCTTATCATATAATGTATATTACATTAACATTATTCTAGTAGTCCAATCGTAAGCTCCATTTCCAAAATTAAATTAGTTTAATATGATATAATTTAGTGTTAGAATTATCATGAAATATTTAAAAGTGATAGAGGGAGCGATTGTGACTTGAATAGCAATTATATTATTAGCCCCAACTTAACATTGGTTATACCTTGTTATAATGAAGAAGCTGTTTTACCTGAAACTATAAGACAACTTACACTTATTTTAAACAATTTGATTCAAATAAATAAAATTTCTCAAAATAGCAAAATTTTATTTATCGATGACGGAAGCCGAGATAGTACATGGGAGCTTATTGAGAGTAATAATAAAGTCAATAAATATGTACATGGGTTAAAATTAGCAAAAAATGCTGGTCACCAAAACGCATTATTGGCCGGATTAATATCAGCCAAAGATTATTCAGATATTATAATTTCGATTGATGCTGATCTTCAAGATGATCTAAATGTAATTCATGAATTTATTAATAAATATGAAGAAGGTTATGATGTTGTATATGGCGTGAGAAAAAGTAGATCGACTGACACCTTCTTTAAACGTTCTACTGCTCAAGGTTTTTATAGATTAATGAACTCTATGGGGGTTAATTTAGTTTTTAATCATGCGGATTATCGTTTGATGAGTAAAAGAGCAGTACAACATCTATCAGAGTTCAAAGAAGTAAACCTTTTTCTAAGAGGGCTGGTACCTTTAATTGGGTTTAGATCTACTGAGGTATATTATGATAGGAATGAACGCTTTGCAGGAGAATCTAAATATCCCTTAAAAAAAATGCTAGCCTTTGCTTTTGATGGAATAACCTCATTTAGTGTAACTCCAATACGCTTGATTACTGGACTGGGCTTCATCATATCTTTGTTCAGTATTTTGGTTGCTATATATATCCTTATTAGCAAATTTTCCGGAAGCACTACATCTGGTTGGTCCTCGTTAATGATTTCAATCTGGTTTATTGGTGGTGTGCAGTTGGTAGCCTTGGGGTTGATTGGGGAGTACATCGGAAAGATATACAAAGAGGTCAAAGCTCGCCCTAAGTATATCATTGAAAAACTAACCTTAGAGGTTAAGGACTCTAACCAGAATGAAAGCAAAGAACTTGCTTCTTTAGCTCGCTAGAAATAAATCAATAAAAAAATCTCCATGTTTTGAATTTCCTAACATGGAGATTTTTTTATTTAATACAATATATAATACCCCTTAACAATCCAAATCATTAAAAGAGACAAGATGTTAACAGCAGGAAAAGCAAAAATAAATATATACCCAAGTTTATTTTTCAGTTCTATTTTGTTAAGAACATTAATTGATACAAGCGAGAGTAAAGCAGCGCTTACTGTCAGAGTTCTATTCCCCGAAGCATAAATAGTGGGAGAAAAAAACATAATACACATTGATGCTATTGCGGCTGCTAGGCATAATAGGATAAACCATTTTCTCTCAGAGATCATTATAAGCATTGAAATCAGCAATAGAGAAAAAATCGACCAGAAAATATACGGAATTAATGCCAAGATAAATTTCGGTTCTATTGTCCAGATATTAATCAGATTATGCCCAAAATGAAAATTCCTGATAGCTTCAAAGTCAAACAATACATTATTTGGATTTCCGATTATAAGAACCGAGAATGAAGTTGCAACTAAAACAATAAAGATAAAATTCAGAAGTCGAGTTACGTAAGTTTGCTTCACATTCGATTGAAAATTAAATACATAGAGGGTTCCTACAGAAATTAAAAGCAATAACCATTTTAATTCCGTAAAAGCTTTCCCAAAAAACCAAATTACACCGAGGTATAAATGATCTTTTAACGACAGTTCATTAAAATTCGGAAACCAAGTGGCCGTCTCGGAAACAAATCTGCTACTATTTCCGGGAGCCTTAATGGAGATGATAGTACCAACCAAAAAAATAACTGTTAGAAAAATCAATCTAATACTATATTTCTTAGTTTTAATAAAATATGTCGTTATAGAAACCAACCCAAAACTAACCATACATAAGGCAGCTTGTTCATTAGCAAACACTGCTAAGAGACCTGTTAATAATGAGAGCAAAATGCGTCTGTTACTGGTATCGTAATTATTTCTAAATGTGTAGTCTGCAAAAGGTATCATTGCAAATAGTCCCATCGCTATTGACCATAAATAAATCATTGAGCCAGTAATCCAAAAGACACCCGAACTAAGAATGCTTTGGCTGAAGTAACCCATAATGCACAAAGCAACAATAAAATATCTTAACGAATTCTTTTCTCTAATTATTCTAACTAACGAATAGGCTACAAGCATAATAAATCCAGCATTAATGAACTTCCAGAGCCAAACTTTCCCCCCAAGAAAGAAATAGAAAAAAAGTTCACCTGACATTCTTCCAGTCCAACCGTTATATCGCATGCTTAAATACTCTGTAAGTGAATACTGGCTTGACATTCCACTAAAAAGAGTATCATCACCAGGCGCGATTTTTATTATGAAATGAAAAAAGTAAATTACAAAGTAGATCAGTAAATATTTCATTATTACATTAATATGTATTTTAATACTATCTCCCCCTTTACTTAACCACAATTATCGAATCAGTTATATATATCCAACCATTACCAACATTTTGAATAACATATTTCCCAAAAAATTTTGTCTGTACAATTTACTTCTTTTTAAAAAGACTAACTTCTGTACAAGAGATTCTCTTTCATCTAAAAATAAGCGTAGTTGTTCTTTGTTTCCCCCTGAAATCTTATCTCCATAACATTTCCAAAACTCCAAGGCCTGTTTATACAACAACCGTCGCCCTCTGTTCTCAGAGAAGCTCATAAATTTCCTAAGTAATATATCCAGGAAAGTTTTGTTGCCCCCTACAACATTCGATTCATGCTGTCTGTAAAGTATAGTTGGATCGGATTCATAAATAATCTCACCAAAAGCAGAGATAAATAAATAAATCCACCAATCATGCATAATGATATTTTCGTTGTCGGGCACGCATTTAATTAACCCATCTCTAGCTTTTCTGTTAATAGTAATGGTTGCACCGACAACAACATTCTCCACCAATGCATTATAAAAACCAAGAGCTTTTCCAGGCCGCTGCGGCCACACTTTAATTTCCTTTAATTTTGAATCAGTCAATTGAGTAGCAGAACAAAATAACAGGGGTTTATTGTTATTTTGTTCCATTAATTTCAATATAGAAACTTCAACCTTAGTTTTCTTCCATATATCATCTTGGTCGCAAAAAGAATAATATTGCGCATCTGTTCTGGCTTCTCTCAAAAGCTCAAAAAAACTATTTATAACTCCAATGTTTTTGCCTCTTATTAATCTTATTTGTGATGGATATCTAGACATATACATCTCAATAATATCGAGTGTTCCATCATTTGAGCCATCGTCTCGAATAAGAATATCCAGATCACTATAAGACTGAGACAATAAACTATCAATTTGTTGAGAAATATATTTCTCACCATTGTATGTTGATAATAGAATTTGGACAGTCAT

Protein sequences of DBSCAN-SWA_11

>NZ_CP009241|7012528:7019414|7017086_7018307_-|WP_156130969.1|DBSCAN-SWA
MRYNGWTGRMSGELFFYFFLGGKVWLWKFINAGFIMLVAYSLVRIIREKNSLRYFIVALCIMGYFSQSILSSGVFWITGSMIYLWSIAMGLFAMIPFADYTFRNNYDTSNRRILLSLLTGLLAVFANEQAALCMVSFGLVSITTYFIKTKKYSIRLIFLTVIFLVGTIISIKAPGNSSRFVSETATWFPNFNELSLKDHLYLGVIWFFGKAFTELKWLLLLISVGTLYVFNFQSNVKQTYVTRLLNFIFIVLVATSFSVLIIGNPNNVLFDFEAIRNFHFGHNLINIWTIEPKFILALIPYIFWSIFSLLLISMLIMISERKWFILLCLAAAIASMCIMFFSPTIYASGNRTLTVSAALLSLVSINVLNKIELKNKLGYIFIFAFPAVNILSLLMIWIVKGYYILY
>NZ_CP009241|7012528:7019414|7012528_7013389_-|WP_038600948.1|DBSCAN-SWA
MKVLVTGSAGQLGQDLVLLLQEQGHEVLGCDRQEMDITDLDQCTEVISGFSPDAVIHCAAHTAVDIAETDVDAAYLINATGSRNVALAAEKSGAKLVYISTDYVFDGMGTQPYHEYDNTDPQSIYGKSKRAGEILVQSLSSKFFIVRTSWVYGKYGNNFVKTMLKLGQEKPLLQVVDDQQGSPTYTVDLARFLLELIQTEKYGIYHASNSESCTWYEFTQAIFAEAEDILGLKFTAKLEPCATEQFPRPAPRPRNSVMEHLAIRTNGFEDIRPWRAGLRDFLLELK
>NZ_CP009241|7012528:7019414|7013397_7014420_-|WP_038597188.1|DBSCAN-SWA
MKLLVTGGAGFIGSNFVIYMLQQHPDYQIVNVDALTYAGNLENLKSVEGNPNYTFAKADITDVEAMDTLFSQGVDIVVNFAAESHVDRSILEPDVFVKTNVLGTQVLLDAAKKYSVTKFVQVSTDEVYGTLGATGLFTEETPLTPNSPYSASKAGGDLLVRAYHETFGLPVNITRCSNNYGPYQFPEKLIPLMISRALADQALPVYGDGMNIRDWLYVEDHCSAIDLVIHEGVNGEVYNIGGNNERTNVHIVNTVLQELGKPDSLITYVQDRPGHDRRYGIDPTKITNELGWKPKHTFETGIKETIQWYLNNKEWWTRIQSGEYQKYAELQYGSRLGDSL
>NZ_CP009241|7012528:7019414|7015020_7015764_-|WP_038597190.1|DBSCAN-SWA
MKGIILAGGTGSRLYPLTKVTNKHLLPVGKYPMIFHSVYKLKQADVKDILIVTGKEHMGDVVNLLGSGREMGVTFTYKVQDEAGGIAQALDLAEQFVGQDQMIVILGDNVFEDDIAPFVDNFREQKAGAKILIQEVIDPSRFGVPELEGDRIVSIEEKPATPKSNYAVTGIYMFDSEVFKIIKTISPSARGELEITDVNNAYINRGELTFDVLQGWWTDAGTHVSLAKANGLAQEITFGEEFGKLKL
>NZ_CP009241|7012528:7019414|7018493_7019414_-|WP_038597198.1|DBSCAN-SWA
MTVQILLSTYNGEKYISQQIDSLLSQSYSDLDILIRDDGSNDGTLDIIEMYMSRYPSQIRLIRGKNIGVINSFFELLREARTDAQYYSFCDQDDIWKKTKVEVSILKLMEQNNNKPLLFCSATQLTDSKLKEIKVWPQRPGKALGFYNALVENVVVGATITINRKARDGLIKCVPDNENIIMHDWWIYLFISAFGEIIYESDPTILYRQHESNVVGGNKTFLDILLRKFMSFSENRGRRLLYKQALEFWKCYGDKISGGNKEQLRLFLDERESLVQKLVFLKRSKLYRQNFLGNMLFKMLVMVGYI
>NZ_CP009241|7012528:7019414|7016025_7017027_+|WP_156131049.1|DBSCAN-SWA
MISPNLTLVIPCYNEEAVLPETIRQLTLILNNLIQINKISQNSKILFIDDGSRDSTWELIESNNKVNKYVHGLKLAKNAGHQNALLAGLISAKDYSDIIISIDADLQDDLNVIHEFINKYEEGYDVVYGVRKSRSTDTFFKRSTAQGFYRLMNSMGVNLVFNHADYRLMSKRAVQHLSEFKEVNLFLRGLVPLIGFRSTEVYYDRNERFAGESKYPLKKMLAFAFDGITSFSVTPIRLITGLGFIISLFSILVAIYILISKFSGSTTSGWSSLMISIWFIGGVQLVALGLIGEYIGKIYKEVKARPKYIIEKLTLEVKDSNQNESKELASLAR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038600948.1|7012528_7013389_-	dTDP-4-dehydrorhamnose reductase	I7HXC9	Enterobacteria_phage	9.6e-34	36.7
WP_038597188.1|7013397_7014420_-	dTDP-glucose 4,6-dehydratase	A0A1D7XFE8	Escherichia_phage	8.9e-79	47.3
WP_038597190.1|7015020_7015764_-	NTP transferase domain-containing protein	I7I009	Enterobacteria_phage	1.2e-51	44.9
WP_156131049.1|7016025_7017027_+	glycosyltransferase	I1TED8	Salmonella_phage	3.8e-50	39.1
WP_156130969.1|7017086_7018307_-	hypothetical protein	V9QKK6	Oenococcus_phage	1.1e-22	27.3
WP_038597198.1|7018493_7019414_-	glycosyltransferase family 2 protein	A0A1V0SAH6	Catovirus	1.5e-05	26.5