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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009286 Paenibacillus stellifer strain DSM 14472 chromosome, complete genome 16 crisprs cas3,PrimPol,csa3,DEDDh,WYL,cas14j,DinG,cas5,cas8c,cas7,cas4,cas1,cas2,RT,c2c9_V-U4 3 24 11 1

Results visualization

1. NZ_CP009286
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_1 189564-189671 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_2 500679-500776 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_3 1322012-1322120 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_4 1369542-1372115 TypeI NA:I-C
38 spacers
cas3,cas5,cas8c,cas7,cas4

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_5 1376916-1378753 TypeI I-C
27 spacers
cas3,cas5,cas8c,cas7,cas4,cas1,cas2

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_6 1387249-1389212 TypeI I-C
29 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_7 1389855-1390149 TypeI NA:I-C
4 spacers
cas2,cas1,cas4,cas7,cas8c,cas5,cas3,WYL

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_8 1912717-1912815 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_9 2554734-2554810 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_10 2746907-2747002 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_11 3429162-3429255 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_12 3829068-3829152 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_13 4091008-4091121 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_14 4194723-4194842 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_15 4230489-4230584 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009286_16 5294942-5295045 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP009286_6 6.15|1388213|35|NZ_CP009286|CRISPRCasFinder,CRT 1388213-1388247 35 NZ_CP009286.1 1362623-1362657 0 1.0
NZ_CP009286_6 6.44|1388214|35|NZ_CP009286|PILER-CR 1388214-1388248 35 NZ_CP009286.1 1362623-1362657 0 1.0
NZ_CP009286_4 4.20|1370841|33|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1370841-1370873 33 NZ_CP009286.1 2077639-2077671 1 0.97

1. spacer 6.15|1388213|35|NZ_CP009286|CRISPRCasFinder,CRT matches to position: 1362623-1362657, mismatch: 0, identity: 1.0

ctactgcccttgattccagtgtagcattatgcaag	CRISPR spacer
ctactgcccttgattccagtgtagcattatgcaag	Protospacer
***********************************

2. spacer 6.44|1388214|35|NZ_CP009286|PILER-CR matches to position: 1362623-1362657, mismatch: 0, identity: 1.0

ctactgcccttgattccagtgtagcattatgcaag	CRISPR spacer
ctactgcccttgattccagtgtagcattatgcaag	Protospacer
***********************************

3. spacer 4.20|1370841|33|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to position: 2077639-2077671, mismatch: 1, identity: 0.97

tttgatgtctgcatggcgatatatggcgatggc	CRISPR spacer
tttgatgtctgcatggcggtatatggcgatggc	Protospacer
******************.**************

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 MG727697 Paenibacillus phage Dragolir, complete genome 29025-29056 2 0.938
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 MG727697 Paenibacillus phage Dragolir, complete genome 29025-29056 2 0.938
NZ_CP009286_10 10.1|2746941|28|NZ_CP009286|CRISPRCasFinder 2746941-2746968 28 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 119930-119957 4 0.857
NZ_CP009286_10 10.1|2746941|28|NZ_CP009286|CRISPRCasFinder 2746941-2746968 28 NZ_CP054609 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence 323955-323982 4 0.857
NZ_CP009286_10 10.1|2746941|28|NZ_CP009286|CRISPRCasFinder 2746941-2746968 28 NZ_CP054609 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence 324022-324049 4 0.857
NZ_CP009286_9 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder 2554757-2554787 31 NC_016587 Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence 331088-331118 5 0.839
NZ_CP009286_10 10.1|2746941|28|NZ_CP009286|CRISPRCasFinder 2746941-2746968 28 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 1951793-1951820 5 0.821
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 900668-900725 6 0.897
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 1553592-1553649 7 0.879
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 2547776-2547833 7 0.879
NZ_CP009286_4 4.32|1371649|34|NZ_CP009286|CRISPRCasFinder,CRT 1371649-1371682 34 MN150686 Bacillus phage BC-T25, complete genome 137361-137394 7 0.794
NZ_CP009286_5 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378288-1378319 32 MK250028 Prevotella phage Lak-B9, complete genome 411497-411528 7 0.781
NZ_CP009286_5 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378288-1378319 32 MK250025 Prevotella phage Lak-B6, complete genome 410159-410190 7 0.781
NZ_CP009286_5 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378288-1378319 32 MK250022 Prevotella phage Lak-B3, complete genome 410250-410281 7 0.781
NZ_CP009286_5 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378288-1378319 32 MK250020 Prevotella phage Lak-B1, complete genome 411480-411511 7 0.781
NZ_CP009286_5 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378288-1378319 32 NC_010608 Exiguobacterium arabatum pEspB plasmid 14478-14509 7 0.781
NZ_CP009286_5 5.25|1378552|35|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378552-1378586 35 NC_011887 Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence 195499-195533 7 0.8
NZ_CP009286_9 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder 2554757-2554787 31 NZ_LR536451 Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 2 161566-161596 7 0.774
NZ_CP009286_9 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder 2554757-2554787 31 NZ_CP016451 Sinorhizobium sp. RAC02 plasmid pBSY16_2, complete sequence 227677-227707 7 0.774
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP054613 Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence 1583788-1583845 8 0.862
NZ_CP009286_5 5.26|1378619|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378619-1378652 34 NZ_AP014705 Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence 241077-241110 8 0.765
NZ_CP009286_6 6.4|1387483|33|NZ_CP009286|CRISPRCasFinder,CRT 1387483-1387515 33 NZ_CP019309 Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-2, complete sequence 16762-16794 8 0.758
NZ_CP009286_6 6.4|1387483|33|NZ_CP009286|CRISPRCasFinder,CRT 1387483-1387515 33 NZ_CP013054 Sinorhizobium americanum CCGM7 plasmid C, complete sequence 693712-693744 8 0.758
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 CP036421 Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence 86030-86061 8 0.75
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 NZ_CP020811 Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed2, complete sequence 52123-52154 8 0.75
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 NZ_CP016453 Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence 182080-182111 8 0.75
NZ_CP009286_6 6.33|1387484|33|NZ_CP009286|PILER-CR 1387484-1387516 33 NZ_CP019309 Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-2, complete sequence 16762-16794 8 0.758
NZ_CP009286_6 6.33|1387484|33|NZ_CP009286|PILER-CR 1387484-1387516 33 NZ_CP013054 Sinorhizobium americanum CCGM7 plasmid C, complete sequence 693712-693744 8 0.758
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 CP036421 Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence 86030-86061 8 0.75
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 NZ_CP020811 Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed2, complete sequence 52123-52154 8 0.75
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 NZ_CP016453 Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence 182080-182111 8 0.75
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP016544 Planococcus donghaensis strain DSM 22276 plasmid pPD76, complete sequence 7380-7437 9 0.845
NZ_CP009286_4 4.17|1370640|35|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1370640-1370674 35 MT701587 Burkholderia phage Magia, complete genome 4409-4443 9 0.743
NZ_CP009286_5 5.5|1377219|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1377219-1377252 34 NZ_LR134460 Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence 134424-134457 9 0.735
NZ_CP009286_5 5.19|1378155|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378155-1378188 34 NZ_CP028488 Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence 16922-16955 9 0.735
NZ_CP009286_6 6.5|1387548|34|NZ_CP009286|CRISPRCasFinder,CRT 1387548-1387581 34 NC_023549 Clavibacter phage CN1A, complete genome 35777-35810 9 0.735
NZ_CP009286_6 6.5|1387548|34|NZ_CP009286|CRISPRCasFinder,CRT 1387548-1387581 34 HQ123592 Clavibacter phage CN77 clone K15 hypothetical protein (K15-1), unknown (K15-2), and unknown (K15-3) genes, complete cds 3889-3922 9 0.735
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 NZ_CP022081 Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence 191389-191420 9 0.719
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 NZ_CP023519 Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence 133791-133822 9 0.719
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 NZ_CP007745 Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence 157705-157736 9 0.719
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 NZ_CP012984 Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416 138225-138256 9 0.719
NZ_CP009286_6 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT 1388746-1388777 32 NZ_CP034556 Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence 37235-37266 9 0.719
NZ_CP009286_6 6.25|1388877|34|NZ_CP009286|CRISPRCasFinder,CRT 1388877-1388910 34 NZ_CP004389 Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence 185602-185635 9 0.735
NZ_CP009286_6 6.28|1389079|34|NZ_CP009286|CRISPRCasFinder,CRT 1389079-1389112 34 MK415406 Phage FAKO27_000238F, complete genome 4383-4416 9 0.735
NZ_CP009286_6 6.34|1387549|34|NZ_CP009286|PILER-CR 1387549-1387582 34 NC_023549 Clavibacter phage CN1A, complete genome 35777-35810 9 0.735
NZ_CP009286_6 6.34|1387549|34|NZ_CP009286|PILER-CR 1387549-1387582 34 HQ123592 Clavibacter phage CN77 clone K15 hypothetical protein (K15-1), unknown (K15-2), and unknown (K15-3) genes, complete cds 3889-3922 9 0.735
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 NZ_CP022081 Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence 191389-191420 9 0.719
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 NZ_CP023519 Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence 133791-133822 9 0.719
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 NZ_CP007745 Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence 157705-157736 9 0.719
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 NZ_CP012984 Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416 138225-138256 9 0.719
NZ_CP009286_6 6.52|1388747|32|NZ_CP009286|PILER-CR 1388747-1388778 32 NZ_CP034556 Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence 37235-37266 9 0.719
NZ_CP009286_6 6.54|1388878|34|NZ_CP009286|PILER-CR 1388878-1388911 34 NZ_CP004389 Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence 185602-185635 9 0.735
NZ_CP009286_6 6.57|1389080|34|NZ_CP009286|PILER-CR 1389080-1389113 34 MK415406 Phage FAKO27_000238F, complete genome 4383-4416 9 0.735
NZ_CP009286_7 7.1|1389887|34|NZ_CP009286|CRISPRCasFinder 1389887-1389920 34 LC168164 Tenacibaculum phage pT24 DNA, complete genome 220161-220194 9 0.735
NZ_CP009286_9 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder 2554757-2554787 31 NZ_CP040452 Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence 158940-158970 9 0.71
NZ_CP009286_9 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder 2554757-2554787 31 NZ_CP043762 Paenibacillus sp. 37 plasmid pART37, complete sequence 99874-99904 9 0.71
NZ_CP009286_15 15.1|4230521|32|NZ_CP009286|CRISPRCasFinder 4230521-4230552 32 NZ_CP022563 Pseudomonas monteilii strain B5 plasmid pSH5-1, complete sequence 25416-25447 9 0.719
NZ_CP009286_15 15.1|4230521|32|NZ_CP009286|CRISPRCasFinder 4230521-4230552 32 NZ_CP016850 Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence 79929-79960 9 0.719
NZ_CP009286_15 15.1|4230521|32|NZ_CP009286|CRISPRCasFinder 4230521-4230552 32 MN961670 Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence 200323-200354 9 0.719
NZ_CP009286_15 15.1|4230521|32|NZ_CP009286|CRISPRCasFinder 4230521-4230552 32 NZ_MH061177 Pseudomonas fluorescens strain P69 plasmid pG69, complete sequence 50096-50127 9 0.719
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP033045 Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence 484370-484427 10 0.828
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP033045 Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence 485380-485437 10 0.828
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 CP031730 Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence 312640-312697 10 0.828
NZ_CP009286_4 4.15|1370508|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1370508-1370541 34 MT345684 Alteromonas phage vB_AcoS-R7M, complete genome 3855-3888 10 0.706
NZ_CP009286_5 5.26|1378619|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT 1378619-1378652 34 NC_008826 Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence 139061-139094 10 0.706
NZ_CP009286_4 4.23|1371043|37|NZ_CP009286|CRISPRCasFinder,CRT 1371043-1371079 37 NC_007491 Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence 25411-25447 11 0.703
NZ_CP009286_4 4.23|1371043|37|NZ_CP009286|CRISPRCasFinder,CRT 1371043-1371079 37 NZ_CP050125 Rhodococcus erythropolis strain KB1 plasmid plas1, complete sequence 213214-213250 11 0.703
NZ_CP009286_4 4.23|1371043|37|NZ_CP009286|CRISPRCasFinder,CRT 1371043-1371079 37 NZ_CP034156 Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence 220022-220058 11 0.703
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NC_004604 Bacillus megaterium QM B1551 plasmid pBM400, complete sequence 47657-47714 15 0.741
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP041068 Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence 37432-37489 15 0.741
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 CP041516 Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence 16631-16688 15 0.741
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP024037 Bacillus aryabhattai strain K13 plasmid unnamed2 9191-9248 16 0.724
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP026740 Bacillus megaterium strain YC4-R4 plasmid unnamed4 69536-69593 16 0.724
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP010587 Bacillus megaterium Q3 plasmid p1, complete sequence 2068-2125 16 0.724
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NZ_CP023319 Bacillus megaterium strain A plasmid p2, complete sequence 553-610 16 0.724
NZ_CP009286_1 1.1|189589|58|NZ_CP009286|CRISPRCasFinder 189589-189646 58 NC_017139 Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence 90-147 16 0.724

1. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to MG727697 (Paenibacillus phage Dragolir, complete genome) position: , mismatch: 2, identity: 0.938

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
ttccacaaagctatccaggagctgttggccgc	Protospacer
*** ********************.*******

2. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to MG727697 (Paenibacillus phage Dragolir, complete genome) position: , mismatch: 2, identity: 0.938

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
ttccacaaagctatccaggagctgttggccgc	Protospacer
*** ********************.*******

3. spacer 10.1|2746941|28|NZ_CP009286|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 4, identity: 0.857

ggcaaa--acttgcttcgaaagcatccgct	CRISPR spacer
--caaattgcttgcttcgaaagcatacgct	Protospacer
  ****  .**************** ****

4. spacer 10.1|2746941|28|NZ_CP009286|CRISPRCasFinder matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.857

ggcaaa--acttgcttcgaaagcatccgct	CRISPR spacer
--caaattgcttgcttcgaaagcatacgct	Protospacer
  ****  .**************** ****

5. spacer 10.1|2746941|28|NZ_CP009286|CRISPRCasFinder matches to NZ_CP054609 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.857

ggcaaa--acttgcttcgaaagcatccgct	CRISPR spacer
--caaattgcttgcttcgaaagcatacgct	Protospacer
  ****  .**************** ****

6. spacer 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder matches to NC_016587 (Azospirillum lipoferum 4B plasmid AZO_p4, complete sequence) position: , mismatch: 5, identity: 0.839

ccatgaacataaccacgaccatggcgacggc	CRISPR spacer
ccatgaccatgaccacgaccatggcgaccat	Protospacer
****** ***.***************** ..

7. spacer 10.1|2746941|28|NZ_CP009286|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 5, identity: 0.821

ggcaaaacttgcttcgaaagcatccgct	CRISPR spacer
caaaatacttgcttcgaaagcattcgct	Protospacer
 . ** *****************.****

8. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 6, identity: 0.897

-gctaccatacatacggaggcttagctcagctgggagagcatctgccttacaagcagag	CRISPR spacer
aagtcgcttaca-acggaggcttagctcagctgggagagcatctgccttacaagcagag	Protospacer
 . *  * **** **********************************************

9. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.879

---gctaccatacatacggaggcttagctcagctgggagagcatctgccttacaagcaga	CRISPR spacer
cgggtcaccat---tatggaggcttagctcagctgggagagcatctgccttacaagcaga	Protospacer
   *..*****   **.*******************************************

10. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.879

---gctaccatacatacggaggcttagctcagctgggagagcatctgccttacaagcaga	CRISPR spacer
cgggtcaccat---tatggaggcttagctcagctgggagagcatctgccttacaagcaga	Protospacer
   *..*****   **.*******************************************

11. spacer 4.32|1371649|34|NZ_CP009286|CRISPRCasFinder,CRT matches to MN150686 (Bacillus phage BC-T25, complete genome) position: , mismatch: 7, identity: 0.794

ccaagctcttaccattactttcttcatcgtcttt	CRISPR spacer
cccaacaaataccattactttctgcaacgtcttt	Protospacer
** *.*   ************** ** *******

12. spacer 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 7, identity: 0.781

aaaaaagtcttaaatattgtcaaatagatcac	CRISPR spacer
aaaaaagtcttaaatatttttaaatttatttt	Protospacer
****************** *.****  **. .

13. spacer 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 7, identity: 0.781

aaaaaagtcttaaatattgtcaaatagatcac	CRISPR spacer
aaaaaagtcttaaatatttttaaatttatttt	Protospacer
****************** *.****  **. .

14. spacer 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 7, identity: 0.781

aaaaaagtcttaaatattgtcaaatagatcac	CRISPR spacer
aaaaaagtcttaaatatttttaaatttatttt	Protospacer
****************** *.****  **. .

15. spacer 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 7, identity: 0.781

aaaaaagtcttaaatattgtcaaatagatcac	CRISPR spacer
aaaaaagtcttaaatatttttaaatttatttt	Protospacer
****************** *.****  **. .

16. spacer 5.21|1378288|32|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to NC_010608 (Exiguobacterium arabatum pEspB plasmid) position: , mismatch: 7, identity: 0.781

aaaaaagtcttaaatattgtcaa--atagatcac	CRISPR spacer
aaaaaagtcttaagtattgttaatccttaatc--	Protospacer
*************.******.**   * .***  

17. spacer 5.25|1378552|35|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to NC_011887 (Methylobacterium nodulans ORS 2060 plasmid pMNOD02, complete sequence) position: , mismatch: 7, identity: 0.8

taatgcctgtttcgcggctgcgcgttcatcctctg	CRISPR spacer
tggagcctggttcgaggctgcgcgttcatccgcag	Protospacer
*.. ***** **** **************** * *

18. spacer 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder matches to NZ_LR536451 (Methylocella tundrae isolate MTUNDRAET4 annotated genome plasmid 2) position: , mismatch: 7, identity: 0.774

ccatgaacataaccacgaccatggcgacggc	CRISPR spacer
ccatgaccatgaccacgaccatgaccgtgac	Protospacer
****** ***.************.* ..*.*

19. spacer 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder matches to NZ_CP016451 (Sinorhizobium sp. RAC02 plasmid pBSY16_2, complete sequence) position: , mismatch: 7, identity: 0.774

ccatgaacataaccacgaccatggcgacggc	CRISPR spacer
ccatgaccataaccaagaccatgaaagcagc	Protospacer
****** ******** *******. ..*.**

20. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP054613 (Paenibacillus cellulosilyticus strain KACC 14175 plasmid unnamed4, complete sequence) position: , mismatch: 8, identity: 0.862

---gctaccatacatacggaggcttagctcagctgggagagcatctgccttacaagcaga	CRISPR spacer
cgggtcaccat---catggaggcttagctcagctgggagagcatctgccttacaagcaga	Protospacer
   *..*****   .*.*******************************************

21. spacer 5.26|1378619|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014705 (Methylobacterium aquaticum strain MA-22A plasmid pMaq22A_1p, complete sequence) position: , mismatch: 8, identity: 0.765

cgcctcgatgccggtcaacaccgcgacaacctct	CRISPR spacer
ctcctcgatgccggtcgccaccgcgaacacgttg	Protospacer
* **************. ********  ** *. 

22. spacer 6.4|1387483|33|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP019309 (Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-2, complete sequence) position: , mismatch: 8, identity: 0.758

gtagctgcgtcaagcgtgtcctttgcgcccttg	CRISPR spacer
gcaaatgcctcaagcgtgtccgttgcgcccgca	Protospacer
*.*. *** ************ ******** ..

23. spacer 6.4|1387483|33|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 8, identity: 0.758

gtagctgcgtcaagcgtgtcctttgcgcccttg	CRISPR spacer
ttaggtgcgtcaagcttgtcctttgggacgata	Protospacer
 *** ********** ********* * *  *.

24. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cggggcaaagctgtccaggcgctgctggatgc	Protospacer
.  *.*******.****** ******** .**

25. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP020811 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
gaggccaaggccatccaggagctgctggacac	Protospacer
   * ***.**.**************** *.*

26. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 8, identity: 0.75

-----ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
gaactgtcg-----gctttccaggagatgctggccgc	Protospacer
      ***     *** ******** **********

27. spacer 6.33|1387484|33|NZ_CP009286|PILER-CR matches to NZ_CP019309 (Phaeobacter inhibens strain DOK1-1 plasmid pDOK1-1-2, complete sequence) position: , mismatch: 8, identity: 0.758

gtagctgcgtcaagcgtgtcctttgcgcccttg	CRISPR spacer
gcaaatgcctcaagcgtgtccgttgcgcccgca	Protospacer
*.*. *** ************ ******** ..

28. spacer 6.33|1387484|33|NZ_CP009286|PILER-CR matches to NZ_CP013054 (Sinorhizobium americanum CCGM7 plasmid C, complete sequence) position: , mismatch: 8, identity: 0.758

gtagctgcgtcaagcgtgtcctttgcgcccttg	CRISPR spacer
ttaggtgcgtcaagcttgtcctttgggacgata	Protospacer
 *** ********** ********* * *  *.

29. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to CP036421 (Rhodobacter sphaeroides strain HJ plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cggggcaaagctgtccaggcgctgctggatgc	Protospacer
.  *.*******.****** ******** .**

30. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to NZ_CP020811 (Mycobacterium dioxanotrophicus strain PH-06 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.75

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
gaggccaaggccatccaggagctgctggacac	Protospacer
   * ***.**.**************** *.*

31. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to NZ_CP016453 (Sphingobium sp. RAC03 plasmid pBSY17_1, complete sequence) position: , mismatch: 8, identity: 0.75

-----ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
gaactgtcg-----gctttccaggagatgctggccgc	Protospacer
      ***     *** ******** **********

32. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP016544 (Planococcus donghaensis strain DSM 22276 plasmid pPD76, complete sequence) position: , mismatch: 9, identity: 0.845

---gctaccatacatacggaggcttagctcagctgggagagcatctgccttacaagcaga	CRISPR spacer
ggggtcaccat---tttggaggattagctcagctgggagagcatctgccttacaagcaga	Protospacer
   *..*****   * .***** *************************************

33. spacer 4.17|1370640|35|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to MT701587 (Burkholderia phage Magia, complete genome) position: , mismatch: 9, identity: 0.743

---cacaatgccacgtcctccgcgctgcggctgatggt	CRISPR spacer
tcgcggaa---cacttcctccgcggtgcggctgatgcg	Protospacer
   *. **   *** ********* ***********  

34. spacer 5.5|1377219|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR134460 (Tsukamurella tyrosinosolvens strain NCTC13231 plasmid 18, complete sequence) position: , mismatch: 9, identity: 0.735

aagacttacaaggagctgccgcgcgacccggaca	CRISPR spacer
cgcatcttcaaggagctgctgcgcgacccggagg	Protospacer
 . *..* ***********.************ .

35. spacer 5.19|1378155|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028488 (Yersinia massiliensis strain GTA plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.735

atatggatatttattgtttattactcatatcagg-	CRISPR spacer
ttatggatacttattgtttataact-gcattattg	Protospacer
 ********.*********** *** ..**.*   

36. spacer 6.5|1387548|34|NZ_CP009286|CRISPRCasFinder,CRT matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 9, identity: 0.735

tgtcatggcttgattcagacggacgaggagctgc-	CRISPR spacer
aaggctggcctgattccgacggacgagga-ccgcg	Protospacer
 .   ****.****** ************ *.** 

37. spacer 6.5|1387548|34|NZ_CP009286|CRISPRCasFinder,CRT matches to HQ123592 (Clavibacter phage CN77 clone K15 hypothetical protein (K15-1), unknown (K15-2), and unknown (K15-3) genes, complete cds) position: , mismatch: 9, identity: 0.735

tgtcatggcttgattcagacggacgaggagctgc-	CRISPR spacer
aaggctggcctgattccgacggacgagga-ccgcg	Protospacer
 .   ****.****** ************ *.** 

38. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP022081 (Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

39. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP023519 (Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

40. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP007745 (Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

41. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP012984 (Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

42. spacer 6.23|1388746|32|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP034556 (Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

43. spacer 6.25|1388877|34|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP004389 (Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ccttaccgaaatgaccaaggcgaatcaggatcag	CRISPR spacer
gtgaagcaaaatgacaaaagcgaatcaggatcaa	Protospacer
 .  * *.******* **.**************.

44. spacer 6.28|1389079|34|NZ_CP009286|CRISPRCasFinder,CRT matches to MK415406 (Phage FAKO27_000238F, complete genome) position: , mismatch: 9, identity: 0.735

acgagttggaagcaaggaaaatacacgcctaagc	CRISPR spacer
acttattggaagcaaggcaaatacacaccgcaag	Protospacer
**  .************ ********.**  *. 

45. spacer 6.34|1387549|34|NZ_CP009286|PILER-CR matches to NC_023549 (Clavibacter phage CN1A, complete genome) position: , mismatch: 9, identity: 0.735

tgtcatggcttgattcagacggacgaggagctgc-	CRISPR spacer
aaggctggcctgattccgacggacgagga-ccgcg	Protospacer
 .   ****.****** ************ *.** 

46. spacer 6.34|1387549|34|NZ_CP009286|PILER-CR matches to HQ123592 (Clavibacter phage CN77 clone K15 hypothetical protein (K15-1), unknown (K15-2), and unknown (K15-3) genes, complete cds) position: , mismatch: 9, identity: 0.735

tgtcatggcttgattcagacggacgaggagctgc-	CRISPR spacer
aaggctggcctgattccgacggacgagga-ccgcg	Protospacer
 .   ****.****** ************ *.** 

47. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to NZ_CP022081 (Burkholderia cepacia strain FDAARGOS_345 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

48. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to NZ_CP023519 (Burkholderia cepacia strain FDAARGOS_388 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

49. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to NZ_CP007745 (Burkholderia cepacia ATCC 25416 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

50. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to NZ_CP012984 (Burkholderia cepacia ATCC 25416 strain UCB 717 plasmid pBC25416) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

51. spacer 6.52|1388747|32|NZ_CP009286|PILER-CR matches to NZ_CP034556 (Burkholderia cepacia ATCC 25416 plasmid unnamed1, complete sequence) position: , mismatch: 9, identity: 0.719

ttcgacaaagctatccaggagctgctggccgc	CRISPR spacer
cgcatcgaagctatccagcagatgctggccat	Protospacer
. *. *.*********** ** ********..

52. spacer 6.54|1388878|34|NZ_CP009286|PILER-CR matches to NZ_CP004389 (Thalassospira xiamenensis M-5 = DSM 17429 strain M-5 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.735

ccttaccgaaatgaccaaggcgaatcaggatcag	CRISPR spacer
gtgaagcaaaatgacaaaagcgaatcaggatcaa	Protospacer
 .  * *.******* **.**************.

53. spacer 6.57|1389080|34|NZ_CP009286|PILER-CR matches to MK415406 (Phage FAKO27_000238F, complete genome) position: , mismatch: 9, identity: 0.735

acgagttggaagcaaggaaaatacacgcctaagc	CRISPR spacer
acttattggaagcaaggcaaatacacaccgcaag	Protospacer
**  .************ ********.**  *. 

54. spacer 7.1|1389887|34|NZ_CP009286|CRISPRCasFinder matches to LC168164 (Tenacibaculum phage pT24 DNA, complete genome) position: , mismatch: 9, identity: 0.735

cacaaaaatggatttatttgttaattattggacg	CRISPR spacer
cttgaaaatggatttattagtaaattatttttca	Protospacer
* ..************** ** *******   *.

55. spacer 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.71

ccatgaacataaccacgaccatggcgacggc	CRISPR spacer
ccatgaacataatcaagaccatgaacataat	Protospacer
************.** *******.  *....

56. spacer 9.1|2554757|31|NZ_CP009286|CRISPRCasFinder matches to NZ_CP043762 (Paenibacillus sp. 37 plasmid pART37, complete sequence) position: , mismatch: 9, identity: 0.71

ccatgaacataaccacgaccatggcgacggc	CRISPR spacer
tagtaaacataatcacgaccatagcgaccaa	Protospacer
. .*.*******.*********.***** . 

57. spacer 15.1|4230521|32|NZ_CP009286|CRISPRCasFinder matches to NZ_CP022563 (Pseudomonas monteilii strain B5 plasmid pSH5-1, complete sequence) position: , mismatch: 9, identity: 0.719

attactactccgagatatcttcaacaaaactt	CRISPR spacer
agcgctactgcgtgatatcttcaacaacgcag	Protospacer
* ..***** ** ************** .*  

58. spacer 15.1|4230521|32|NZ_CP009286|CRISPRCasFinder matches to NZ_CP016850 (Pseudomonas sp. TMW 2.1634 plasmid pL21564-1, complete sequence) position: , mismatch: 9, identity: 0.719

attactactccgagatatcttcaacaaaactt	CRISPR spacer
agcgctactgcgtgatatcttcaacaacgcag	Protospacer
* ..***** ** ************** .*  

59. spacer 15.1|4230521|32|NZ_CP009286|CRISPRCasFinder matches to MN961670 (Pseudomonas putida strain 420352 plasmid p420352-IMP, complete sequence) position: , mismatch: 9, identity: 0.719

attactactccgagatatcttcaacaaaactt	CRISPR spacer
agcgctactgcgtgatatcttcaacaacgcag	Protospacer
* ..***** ** ************** .*  

60. spacer 15.1|4230521|32|NZ_CP009286|CRISPRCasFinder matches to NZ_MH061177 (Pseudomonas fluorescens strain P69 plasmid pG69, complete sequence) position: , mismatch: 9, identity: 0.719

attactactccgagatatcttcaacaaaactt	CRISPR spacer
agcgctactgcgtgatatcttcaacaacgcag	Protospacer
* ..***** ** ************** .*  

61. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.828

----gctaccatacatacggaggcttagctcagctgggagagcatctgccttacaagcag	CRISPR spacer
aggggtcac----catatggaggattagctcagctgggagagcatctgccttacaagcag	Protospacer
    *..**    ****.***** ************************************

62. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP033045 (Bacillus foraminis strain Bac44 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.828

gctaccatacatacggaggcttagctcagctgggagagcatctgccttacaagcagag	CRISPR spacer
ggggtcaccaaaatggaggattagctcagctgggagagcatctgccttacaagcagag	Protospacer
*  ..**.  * *.***** **************************************

63. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to CP031730 (Stenotrophomonas rhizophila strain GA1 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.828

gctaccatacatacggaggcttagctcagctgggagagcatctgccttacaagcagag	CRISPR spacer
acacctgtttctatggaggattagctcagctgggagagcatctgccttacaagcagag	Protospacer
.*  *..* . **.***** **************************************

64. spacer 4.15|1370508|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to MT345684 (Alteromonas phage vB_AcoS-R7M, complete genome) position: , mismatch: 10, identity: 0.706

cgaaagtccgcttgacctccaaggttcgtctgct	CRISPR spacer
tgaaagtccgcttaacctgcaaggtatggccaaa	Protospacer
.************.**** ****** .* *..  

65. spacer 5.26|1378619|34|NZ_CP009286|PILER-CR,CRISPRCasFinder,CRT matches to NC_008826 (Methylibium petroleiphilum PM1 plasmid RPME01, complete sequence) position: , mismatch: 10, identity: 0.706

cgcctcgatgccggtcaacaccgcgacaacctct	CRISPR spacer
tgcctcgatgccggtctgcaccgcgctgtcgtag	Protospacer
.*************** .******* .. * *  

66. spacer 4.23|1371043|37|NZ_CP009286|CRISPRCasFinder,CRT matches to NC_007491 (Rhodococcus erythropolis PR4 plasmid pREL1, complete sequence) position: , mismatch: 11, identity: 0.703

ttattttggaggaatgcagatgtccgagttaacaatg	CRISPR spacer
ctgacaaggaggactgcagatgtccgaggtaaccacc	Protospacer
.*. .  ****** ************** **** *. 

67. spacer 4.23|1371043|37|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP050125 (Rhodococcus erythropolis strain KB1 plasmid plas1, complete sequence) position: , mismatch: 11, identity: 0.703

ttattttggaggaatgcagatgtccgagttaacaatg	CRISPR spacer
ctgacaaggaggactgcagatgtccgaggtaaccacc	Protospacer
.*. .  ****** ************** **** *. 

68. spacer 4.23|1371043|37|NZ_CP009286|CRISPRCasFinder,CRT matches to NZ_CP034156 (Rhodococcus sp. NJ-530 plasmid unnamed4, complete sequence) position: , mismatch: 11, identity: 0.703

ttattttggaggaatgcagatgtccgagttaacaatg	CRISPR spacer
ctgacaaggaggactgcagatgtccgaggtaaccacc	Protospacer
.*. .  ****** ************** **** *. 

69. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NC_004604 (Bacillus megaterium QM B1551 plasmid pBM400, complete sequence) position: , mismatch: 15, identity: 0.741

gctaccataca------tacggaggcttagctcagctgggagagcatctgccttacaagc	CRISPR spacer
------atatagatttttttggaggattagctcagctgggagagcacctgccttacaagc	Protospacer
      ***.*      * .***** ********************.*************

70. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP041068 (Bacillus megaterium strain KNU-01 plasmid pKNU_01_4, complete sequence) position: , mismatch: 15, identity: 0.741

gctaccataca------tacggaggcttagctcagctgggagagcatctgccttacaagc	CRISPR spacer
------atatagatttttttggaggattagctcagctgggagagcacctgccttacaagc	Protospacer
      ***.*      * .***** ********************.*************

71. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to CP041516 (Bacillus aryabhattai strain KNU10 plasmid unnamed, complete sequence) position: , mismatch: 15, identity: 0.741

gctaccataca------tacggaggcttagctcagctgggagagcatctgccttacaagc	CRISPR spacer
------atatagatttttttggaggattagctcagctgggagagcacctgccttacaagc	Protospacer
      ***.*      * .***** ********************.*************

72. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP024037 (Bacillus aryabhattai strain K13 plasmid unnamed2) position: , mismatch: 16, identity: 0.724

gctaccatacata-------cggaggcttagctcagctgggagagcatctgccttacaag	CRISPR spacer
-------tatatagattctttggaggattagctcagctgggagagcacctgccttacaag	Protospacer
       **.***       .***** ********************.************

73. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP026740 (Bacillus megaterium strain YC4-R4 plasmid unnamed4) position: , mismatch: 16, identity: 0.724

gctaccatacata-------cggaggcttagctcagctgggagagcatctgccttacaag	CRISPR spacer
-------tatatagattctttggaggattagctcagctgggagagcacctgccttacaag	Protospacer
       **.***       .***** ********************.************

74. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP010587 (Bacillus megaterium Q3 plasmid p1, complete sequence) position: , mismatch: 16, identity: 0.724

gctaccatacata-------cggaggcttagctcagctgggagagcatctgccttacaag	CRISPR spacer
-------tatatagattctttggaggattagctcagctgggagagcacctgccttacaag	Protospacer
       **.***       .***** ********************.************

75. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NZ_CP023319 (Bacillus megaterium strain A plasmid p2, complete sequence) position: , mismatch: 16, identity: 0.724

gctaccatacata-------cggaggcttagctcagctgggagagcatctgccttacaag	CRISPR spacer
-------tatatagattctttggaggattagctcagctgggagagcacctgccttacaag	Protospacer
       **.***       .***** ********************.************

76. spacer 1.1|189589|58|NZ_CP009286|CRISPRCasFinder matches to NC_017139 (Bacillus megaterium WSH-002 plasmid WSH-002_p1, complete sequence) position: , mismatch: 16, identity: 0.724

gctaccatacata-------cggaggcttagctcagctgggagagcatctgccttacaag	CRISPR spacer
-------tatatagattctttggaggattagctcagctgggagagcacctgccttacaag	Protospacer
       **.***       .***** ********************.************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 61595 : 130209 84 Paenibacillus_phage(13.16%) capsid,terminase,tRNA,plate,integrase,holin,portal,protease attL 91263:91280|attR 128575:128592
DBSCAN-SWA_2 408637 : 417794 10 Caulobacter_phage(42.86%) NA NA
DBSCAN-SWA_3 791190 : 802420 10 Mollivirus(25.0%) NA NA
DBSCAN-SWA_4 831685 : 877000 27 Lactococcus_phage(20.0%) transposase,protease,integrase attL 829937:829952|attR 845846:845861
DBSCAN-SWA_5 1615512 : 1675215 40 Bacillus_phage(33.33%) transposase,integrase attL 1625552:1625611|attR 1675175:1676007
DBSCAN-SWA_6 2041623 : 2093164 67 Bacillus_phage(19.35%) tail,head,capsid,terminase,coat,plate,integrase,holin,portal,protease attL 2041589:2041608|attR 2077838:2077857
DBSCAN-SWA_7 2385918 : 2396605 6 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_8 3121685 : 3129766 9 Streptococcus_virus(33.33%) NA NA
DBSCAN-SWA_9 3672972 : 3681967 11 Staphylococcus_phage(57.14%) NA NA
DBSCAN-SWA_10 4314768 : 4388382 57 Bacillus_phage(33.33%) transposase,protease NA
DBSCAN-SWA_11 5578166 : 5585528 7 Stenotrophomonas_phage(16.67%) tRNA NA
Click the colored protein region to show detailed information
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
NZ_CP009286.1|WP_038694735.1|2044915_2045191_+|hypothetical-protein 2044915_2045191_+ 91 aa aa NA NA NA 2041623-2093164 yes