CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009287	Paenibacillus graminis strain DSM 15220 chromosome, complete genome	36 crisprs	PrimPol,WYL,csa3,DEDDh,cas3,DinG,RT,Cas14u_CAS-V	7	10	9	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009287_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_1

556533-556608

Orphan

Consensus_repeat	Method
ATTAGTGGTACTTTTTCCAACATAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_1

>merge|NZ_CP009287|1|556533-556608|CRISPRCasFinder
ATTAGTGGTACTTTTTCCAACATAATATGTACCATAAGCTGTGTGAGTCGGATTAGTGATACTTTTTCCAACATAA

>NZ_CP009287|1|1|556533-556608|CRISPRCasFinder
ATTAGTGGTACTTTTTCCAACATAA	TATGTACCATAAGCTGTGTGAGTCGG
ATTAGTGATACTTTTTCCAACATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_020426781.1\|559792_559984_+\|YwbE-family-protein	unknown	unknown	gnl\|CDD\|274807
NZ_CP009287.1\|WP_025707610.1\|555298_556198_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235853
NZ_CP009287.1\|WP_156124045.1\|560018_560531_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707615.1\|559418_559721_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224452
NZ_CP009287.1\|WP_025707609.1\|554809_555265_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707392.1\|551532_551940_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP009287.1\|WP_025707397.1\|547492_548605_+\|sulfate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224529
NZ_CP009287.1\|WP_025707395.1\|549585_550449_+\|sulfate-ABC-transporter-permease-subunit-CysW	unknown	unknown	gnl\|CDD\|226665
NZ_CP009287.1\|WP_025707391.1\|551990_552623_+\|NAD(P)H-binding-protein	unknown	unknown	gnl\|CDD\|225462
NZ_CP009287.1\|WP_042265949.1\|556661_557243_+\|DUF4269-domain-containing-protein	unknown	unknown	gnl\|CDD\|379463
NZ_CP009287.1\|WP_025707612.1\|557267_557687_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|235142
NZ_CP009287.1\|WP_025707429.1\|561607_562624_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP009287.1\|WP_025707614.1\|558488_559367_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	unknown	unknown	gnl\|CDD\|377015
NZ_CP009287.1\|WP_025707394.1\|550549_550771_+\|YezD-family-protein	unknown	unknown	gnl\|CDD\|378371
NZ_CP009287.1\|WP_025707393.1\|550968_551277_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707396.1\|548717_549557_+\|sulfate-ABC-transporter-permease-subunit-CysT	unknown	unknown	gnl\|CDD\|131194
NZ_CP009287.1\|WP_025707613.1\|557781_558492_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	unknown	unknown	gnl\|CDD\|129802
NZ_CP009287.1\|WP_042265953.1\|560584_561400_-\|HNH-endonuclease	unknown	unknown	gnl\|CDD\|214702
NZ_CP009287.1\|WP_025707430.1\|562708_564055_+\|glycoside-hydrolase-family-30-protein	unknown	unknown	gnl\|CDD\|307945
NZ_CP009287.1\|WP_042265947.1\|552799_554695_+\|NAD(P)H-hydrate-dehydratase	unknown	unknown	gnl\|CDD\|182554

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025707610.1\|555298_556198_-\|SDR-family-oxidoreductase	gnl\|CDD\|235853	PRK06701, PRK06701, short chain dehydrogenase; Provisional.	1.95064e-156
NZ_CP009287.1\|WP_025707615.1\|559418_559721_-\|hypothetical-protein	gnl\|CDD\|224452	COG1535, EntB, Isochorismate hydrolase [Secondary metabolites biosynthesis, transport, and catabolism].	0.00452106
NZ_CP009287.1\|WP_020426781.1\|559792_559984_+\|YwbE-family-protein	gnl\|CDD\|274807	TIGR03833, TIGR03833, conserved hypothetical protein. A pair of adjacent genes, ablAB (acetyl-beta-lysine biosynthesis) encodes lysine 2,3-aminomutase and beta-lysine acetyltransferase in methanogenic archaea. Homologous pairs, possibly with identical function, occur in a wide range of species, including Bacillus subtilis. This model describes a conserved hypothetical protein, small in size, with a phylogenetic distribution moderately well correlated to that of the acetyltransferase family. This protein family is also described as DUF2196 and COG4895. The function is unknown. [Hypothetical proteins, Conserved].	3.18996e-31
NZ_CP009287.1\|WP_025707392.1\|551532_551940_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.84836e-10
NZ_CP009287.1\|WP_025707397.1\|547492_548605_+\|sulfate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224529	COG1613, Sbp, ABC-type sulfate transport system, periplasmic component [Inorganic ion transport and metabolism].	0
NZ_CP009287.1\|WP_025707395.1\|549585_550449_+\|sulfate-ABC-transporter-permease-subunit-CysW	gnl\|CDD\|226665	COG4208, CysW, ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism].	4.28234e-149
NZ_CP009287.1\|WP_025707391.1\|551990_552623_+\|NAD(P)H-binding-protein	gnl\|CDD\|225462	COG2910, COG2910, Putative NADH-flavin reductase [General function prediction only].	9.50078e-68
NZ_CP009287.1\|WP_042265949.1\|556661_557243_+\|DUF4269-domain-containing-protein	gnl\|CDD\|379463	pfam14091, DUF4269, Domain of unknown function (DUF4269). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 176 and 187 amino acids in length. There is a conserved KTE sequence motif.	4.92315e-76
NZ_CP009287.1\|WP_025707612.1\|557267_557687_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|235142	PRK03624, PRK03624, putative acetyltransferase; Provisional.	2.05824e-27
NZ_CP009287.1\|WP_025707429.1\|561607_562624_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.05065e-113
NZ_CP009287.1\|WP_025707614.1\|558488_559367_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha	gnl\|CDD\|377015	pfam03313, SDH_alpha, Serine dehydratase alpha chain. L-serine dehydratase (EC:4.2.1.13) is a found as a heterodimer of alpha and beta chain or as a fusion of the two chains in a single protein. This enzyme catalyzes the deamination of serine to form pyruvate. This enzyme is part of the gluconeogenesis pathway.	9.89205e-93
NZ_CP009287.1\|WP_042265947.1\|552799_554695_+\|NAD(P)H-hydrate-dehydratase	gnl\|CDD\|182554	PRK10565, PRK10565, putative carbohydrate kinase; Provisional.	3.06178e-83
NZ_CP009287.1\|WP_025707430.1\|562708_564055_+\|glycoside-hydrolase-family-30-protein	gnl\|CDD\|307945	pfam02055, Glyco_hydro_30, Glycosyl hydrolase family 30 TIM-barrel domain.	9.57122e-89
NZ_CP009287.1\|WP_025707396.1\|548717_549557_+\|sulfate-ABC-transporter-permease-subunit-CysT	gnl\|CDD\|131194	TIGR02139, permease_CysT, sulfate ABC transporter, permease protein CysT. This model represents CysT, one of two homologous, tandem permeases in the sulfate ABC transporter system; the other is CysW (TIGR02140). The sulfate transporter has been described in E. coli as transporting sulfate, thiosulfate, selenate, and selenite. Sulfate transporters may also transport molybdate ion if a specific molybdate transporter is not present. [Transport and binding proteins, Anions].	1.68911e-139
NZ_CP009287.1\|WP_025707613.1\|557781_558492_+\|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta	gnl\|CDD\|129802	TIGR00719, Probable_L-serine_dehydratase_beta_chain, L-serine dehydratase, iron-sulfur-dependent, beta subunit. This enzyme is also called serine deaminase. This model describes the beta chain of an iron-sulfur-dependent L-serine dehydratase, as in Bacillus subtilis. A fairly deep split in a UPGMA tree separates members of this family of beta chains from the homologous region of single chain forms such as found in E. coli. This family of enzymes is not homologous to the pyridoxal phosphate-dependent threonine deaminases and eukaryotic serine deaminases. [Energy metabolism, Amino acids and amines, Energy metabolism, Glycolysis/gluconeogenesis].	9.33537e-65
NZ_CP009287.1\|WP_042265953.1\|560584_561400_-\|HNH-endonuclease	gnl\|CDD\|214702	smart00507, HNHc, HNH nucleases.	1.55208e-08
NZ_CP009287.1\|WP_025707394.1\|550549_550771_+\|YezD-family-protein	gnl\|CDD\|378371	pfam10055, DUF2292, Uncharacterized small protein (DUF2292). Members of this family of hypothetical bacterial proteins have no known function.	8.61292e-14

>NZ_CP009287.1|WP_025707610.1|555298_556198_-|SDR-family-oxidoreductase
MNPVYPYYGERTVCRVQPIAFPPQHQDRQPGLESLMQPRPISENPDSRGSGKLDGKVALITGGDSGIGKAAAIAFAKEGADVAIAYLYEASDAEATQRRIEELGQRCLRIQTDLRYKANCIQAVEHTVRTFGKLDILVNNHGVQYPQQSVLDISEEQLYETYRTNIFPFFFLTQAALPHLCTGASIINTASITAYQGNKKLIDYSSTKGAVVTFTRSLALSLADSGIRVNSVAPGPVWTPLIPSSYPAEEVSVFGTDTPFKRAAQPYELAGAYVYLAGPDSTYVTGTCIHVNGGDMVTS
>NZ_CP009287.1|WP_025707609.1|554809_555265_-|hypothetical-protein
MNKLKDYDLPSVRLSAGMYALTKLSAAGLTFMLVSLVMLAFPHTEGVPEGWPTSVPYAIYAYGLPAALVSDALLRVFRFDSLTPALVLYAACGYGAGVWLAAEQGGDAVTCGIAGIFALLLFRLSQLAGERQPLLLPVFALFVPLICLVLF
>NZ_CP009287.1|WP_042265947.1|552799_554695_+|NAD(P)H-hydrate-dehydratase
MYIVTAQEMRELDRQTIERLGIPAVALMENAGRAIAEEILKLCRHRSGKADTSAAWTLGTGGGVHQPGRTEAGTPGRSADGGAYSPGGMRGGGVYGPGGARGGGVYGPDGARGGRVYGPDGARGGGVYGPDGARDGRVYGPDGTGGAGGPGIKPPGFTVSGDSALTLEHAGAEHWLILAGKGNNGGDGLAAARHLREAGIAVTLVYAAAPESLAGEAALQRDAAAALGLPAVVYGRDRVDFAACSGILDALLGTGSAGAPRGAYAELIAAANGSGKPIVSADIPSGLDADTGQTHEPCIHAAVTVCLAFLKRGLLQYPGAGNAGQVVVRSIGIPAALAQKSGVPASLLTPEVLKARLQVDVSRRRSPEGHKGTYGHVLLAAGSLGMSGAGLLAARAALRAGCGLVTWTLPTALLPYVIGAAPELMLAAAGGENGTWSAGTAAEVLRLSKGRDVTAVGPGLGRFEGDQEWLRMLWEGIAAPLVIDADALNILADSHYSSWASRRHPVILTPHPGEMARLAGISTAEVQRDRIGLALAYAREHGVTLVLKGAHTVVATPEGEAYVNITGHPGMGTGGAGDVLTGIIAGLLAQGLHAAQAAAFGVYLHGLAGERAARQRHDPSALIAGDIIEAL
>NZ_CP009287.1|WP_025707391.1|551990_552623_+|NAD(P)H-binding-protein
MDVVVFGATGTIGRAIVQEALNRKHEVTAVVRNPASLELEHERLQVIVADILDPVAVAEAVRGHEEVISAFGPAAGRENDLVRAAESLLEGMQAVGLKRLLVIGGAGTLKTESGEWLMDTPGFPGKFRLLAEAHGHAYEIYSASSLDYTYLSPPAVIRPGRRTGQFRIGLDRLVVDEDGDSSISVEDFAVAVIDELEEGNFSRSRFTVGY
>NZ_CP009287.1|WP_025707392.1|551532_551940_+|GNAT-family-N-acetyltransferase
MEDKLEIRHERPSVEQYLALRMEAGLSAMSAGGAEIGLPRSVFAVTLYEEGALVGMGRVVGDGGCFFQVTDIAVKPSCQGRGLGKIIMREIRSFLDTVPDRSYISLIADGEAARLYAQYGFEPVMPDSQGMFLRR
>NZ_CP009287.1|WP_025707393.1|550968_551277_-|hypothetical-protein
MTPIGKLFKWGTFAYEAFLALPFIGGAFVVANAWAPLGVAFLLHAVAVVLLLRERGPIVGNVVGIVTSVVALIPFVGWIMHAVTAIILLIEGISASRRTPRY
>NZ_CP009287.1|WP_025707394.1|550549_550771_+|YezD-family-protein
MAKPLKVDEVWLARITELLDDMEFGSLHIVVHEGQIVQMERTERKRWENSTANTRYSGEAGSRRTDSRSAGRG
>NZ_CP009287.1|WP_025707395.1|549585_550449_+|sulfate-ABC-transporter-permease-subunit-CysW
MAGTVPMAAPRPHRTAASPATTESSTVKWVLVAAAGLVLFWLIALPLIVVLTEALKRGWDVFLAALTDPDAASALRLTLLVAVITVPLNTLFGVMAAWAVTKFCFRGKGFLITLIDLPFAVSPVIGGLIFVLVFGSNGWFGSWLSAHDIKIVFALPGIVLATLFVTFPFVARELIPLMEDQGTQEEEAAITLGAHGWQIFWRVTLPNIKWGLLYGIILCNARAMGEFGAVSVVSGHIRGETNTLPLHVEILYNEYQFSASFAVASLLLLLALVTMIVKSWLTRKNAH
>NZ_CP009287.1|WP_025707396.1|548717_549557_+|sulfate-ABC-transporter-permease-subunit-CysT
MNVTTTAAVPRKVLPGFGLTMGYSVLYLSLVVLLPLSALLFNSTGLSWAKFWDIATDPRVLASYRVSLSTAAMAALADAFLGLLLAWVLVRYEFPGKRIFDALIDLPFALPTAVAGVSLTALYSQNGWIGSLLEPLGLKIAFTPLGITLALMFIGIPFVVRTVQPVLEDLDRDMEEASATLGAGRWRTFRSIVIPELIPPLLTGFALAFARGIGEYGSVVFISGNMPMRTEIAPLLIMSKLEQFDYAGATAVALLLLLISFLMLLVINTLQRWARKTSR
>NZ_CP009287.1|WP_025707397.1|547492_548605_+|sulfate-ABC-transporter-substrate-binding-protein
MKIGIKKGLITGFALLLTAGLAACGNNNAGNGAAAATDAPAASNAAGAAETTKAPAKDPVELLNVSYDPTRELYENYNKAFSAYWEKETGQKVTVKQSHGGSGAQSRAVQEGLEADVVTLALGYDIDALKDKGLINEGWESKFEHNSSPYTSTIVFLVRKGNPKGIKDWPDLLKAGVEVITPNPKTSGGARWNYLAAWGYALDHNNNDEAKAQEFVQELFKHVPVLDTGARGATTTFVERGIGDVLIAWENEAYLSIKELGPDKFEIVNPSESILAEPPVAVVDKVADKRGTREVAEAYLKYLYTEEGQKIAADNYYRPTLESVKEEYKDKFPEIKLFTLADKFGTWKETQEKHFNDGGIFDKIYVPGGK
>NZ_CP009287.1|WP_042265949.1|556661_557243_+|DUF4269-domain-containing-protein
MEKNNSLVQAEDEAGNAVLREVRQLLRELRILELLAEYHPRLAGTVPLGIQVEGSDLDIICEVQGPRRFTAEARCHFGQLEGFNAVTRTVGGVVRTKINFVAGGWPIELFGQPLPTEKQNAWLHMQVEERILKLLGPGFAEKIRSLKSGGMKTEPAFAKLLKLEGDPYEEMLSLGRLNPEEFNAVCRRAQPYI
>NZ_CP009287.1|WP_025707612.1|557267_557687_+|GNAT-family-N-acetyltransferase
MNYRPMTAEDYEAAYQLWENTGGMKLSGADSRKEILRYLERNPGLSQVAENGDNTLAGTAMCGHDGRRGYMYHVAVSEDGRGQGVGRELVSRCLAGLLQEGIEKCHLMVIENNALGRSFWTSIGWEERDGIVLFSSNTF
>NZ_CP009287.1|WP_025707613.1|557781_558492_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-beta
MRFKDVFSIIGPAMVGPSSSHTAGAARIGRAARQVLGEPAREAEVTFFGSFAATYQGHGTDRAIAGGLLDFATDDSRLPDSIELAAEAGMEISFGQGTGLFPHPNTVRLRLVGAQTGTELTLTGISIGGGNIEIVDIDGFGVKLTGMYPTVLIQHMDYLGVLASVTEVMRKGQFNIGHMSLDRKNRSGAALTVLELDEAATPGLLYELRALSAVKSVKVVDLNESAQELKGKDDTP
>NZ_CP009287.1|WP_025707614.1|558488_559367_+|L-serine-ammonia-lyase,-iron-sulfur-dependent,-subunit-alpha
MNFQTLSQLAVLCEERGMGIGALMLEEQSEESGRSKEQEFATMSQYYGVMKEAVYRGMTEDTTSRSGLTGLDAQRVASYNTADEPCLGGPAGQAMAYALAVSEVNASMGRIIATPTAGSCGIIPGVFLSCQERFGWEDDYMVSGLFAAGAIGYVIANNSFVSGAEGGCQAEVGSAIGMAAGALTELRGGTPAQAVHAVGLALKNTLGLICDPVGGLVEIPCIVRNGFGAVTALAAADMALAGVRSVIPSDEVIKVMLEVGSAMPEKHRETAGGGLAQTPTGRKIMRDLRNKK
>NZ_CP009287.1|WP_025707615.1|559418_559721_-|hypothetical-protein
MAFGINREELTRWKQAVSAGEIAFLTHYWLDPRFPGMTTVTKVGCSNLSRLRSWCEQHGLPSQYIHNRRPFPHFDLMGPKQPEILRQEGQWEQLERFRLL
>NZ_CP009287.1|WP_020426781.1|559792_559984_+|YwbE-family-protein
MNGQVRADIRAGLEVDIVLKQDQATGKLTHGVVKDILTNSPRHPHGIKVRLADGQVGRVKHIT
>NZ_CP009287.1|WP_156124045.1|560018_560531_-|hypothetical-protein
MFLPMAAGGSSTTAFLPLFLPMAAGGSSTTAFLPLFLPMAAGGSSTTAFLPLFLPMTAGGSSTTAFLPLFLPMAAASSLTTAFLPLFLPMAAGGSSTTAFLPLFLPMTAGGSSTTAFLPLFLPMAAASSSTTAFLPLFLPMTAGGSSTTAFLPLFLPNSKKSAHGPQMLF
>NZ_CP009287.1|WP_042265953.1|560584_561400_-|HNH-endonuclease
MTDTHPPLSKQCAYCRQYKPLTEFRRRTGKRSKGQSRRGACRECRKQLLAGKAKPSARGKGTAAISATVISDTGMTDTLVLTRLPVPSATAAAASKPAVSGVQQAFAPERSREGTAALPAHGIKGKARPRGADTARRKTPPHRGPKPDPQDASALIPSAKGMILMRGHSDKGRRWHQEIDLELAVTLVKEHAAVVVNRRTIRRLYSNKDFRAFILNRDHYTCHFCGLYGDTIDHLLPRAKGGHTTPDNCVCACNLCNQTKADQYVEEFMGR
>NZ_CP009287.1|WP_025707429.1|561607_562624_+|LacI-family-DNA-binding-transcriptional-regulator
MTTIYDIAKKTGYSPTTVSKAFNNYSDVREKTRQEILRTAQEMGYLPNAHARTLTTKKSWTIGVLFVEGTGAGIRHPFFSAVIESFKQVAVAKGYALMFISKDVGGKQSGYLENCRIRGVDGVVVFLSDYDDPYFLELLESDIPTVILDYNTPQSHTVCSDNRAGALLAVNYLASLGHRRIGHISGGGNSFPGSERELGYIAAMKELGFDVPDGYIVEGAFFSRESGYDAMLKLLELPECPTAVFASGDLLALGAVMAAKDKGFAVPSDISVIGYDDIELAAYVSPALTTIRQDTDMLGTRAAEILIASIDGKGQDKEALMLPVEVVVRDSCAPRGRE
>NZ_CP009287.1|WP_025707430.1|562708_564055_+|glycoside-hydrolase-family-30-protein
MTKVRTVITAKDTGERLSPREGIVFRVRNTGEKADVQLQPEQAFQQMLGFGGAFTEAAAYTLSRMSPGKRAEVIRRYFHPEEGLNYSMGRVHIHSCDFALGNYTYVQDGDTELATFDIAHDHKWVLPLIKDAMEVRGGPFKMLASPWSPPAWMKTNGEMNNGGSLKPEFANVWARYYTKFIEAYRREGIPVWAVSVQNEPAAVQTWDSCVYSAEEERDFVKNHLGPVMHEAGLADVNIVIWDHNRDIMVERASTVLSDPEAARYVWGTGIHWYGGEEFGKVARVHELFPEKHLLFTEGCQEGGVRLGEWFTGERYGRNMIGDLNAWTEGYLDWNLVLDETGGPNHVGNFCDAPVIADTATDEVHYNSSYYYIGHFSKFIAPGAVRIGLAAAAEGVLSTAFRNPDGSLAVVLMNEGENARSVTLGLGDELAECELPPHSIATHIISQMG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_2

655133-655209

Orphan

Consensus_repeat	Method
ATTAGTGATACAAATTCCACTTAGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_2

>merge|NZ_CP009287|2|655133-655209|CRISPRCasFinder
ATTAGTGATACAAATTCCACTTAGCAGTGTCAGCAGCGGGTTTGCATCAAGATTAGTGGTACAAATTCCACTTAGCA

>NZ_CP009287|2|2|655133-655209|CRISPRCasFinder
ATTAGTGATACAAATTCCACTTAGCA	GTGTCAGCAGCGGGTTTGCATCAAG
ATTAGTGGTACAAATTCCACTTAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703951.1\|660867_662166_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224582
NZ_CP009287.1\|WP_025703956.1\|656850_657633_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293798
NZ_CP009287.1\|WP_025708131.1\|645367_645673_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042265989.1\|646762_647704_-\|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl\|CDD\|224513
NZ_CP009287.1\|WP_025703954.1\|658623_659019_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP009287.1\|WP_019913840.1\|648933_649122_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_155990523.1\|646470_646677_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707912.1\|652546_653173_+\|cytochrome-(ubi)quinol-oxidase-subunit-III	unknown	unknown	gnl\|CDD\|239214
NZ_CP009287.1\|WP_025707910.1\|649523_650573_+\|cytochrome-c-oxidase-subunit-II	unknown	unknown	gnl\|CDD\|224537
NZ_CP009287.1\|WP_025703949.1\|664282_664528_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703952.1\|659972_660875_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|226631
NZ_CP009287.1\|WP_025703953.1\|659035_659968_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009287.1\|WP_025707913.1\|653175_653502_+\|cytochrome-C-oxidase-subunit-IV-family-protein	unknown	unknown	gnl\|CDD\|131954
NZ_CP009287.1\|WP_025703955.1\|657834_658563_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707909.1\|647929_648268_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227155
NZ_CP009287.1\|WP_025703958.1\|655326_656253_+\|cytochrome-c-oxidase-assembly-factor-CtaG	unknown	unknown	gnl\|CDD\|131784
NZ_CP009287.1\|WP_025708130.1\|645717_646311_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181705
NZ_CP009287.1\|WP_042267768.1\|650701_652540_+\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|238832
NZ_CP009287.1\|WP_025703957.1\|656278_656743_+\|DUF420-domain-containing-protein	unknown	unknown	gnl\|CDD\|377257
NZ_CP009287.1\|WP_025703950.1\|662674_663442_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367466

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703951.1\|660867_662166_+\|ABC-transporter-permease	gnl\|CDD\|224582	COG1668, NatB, ABC-type Na+ efflux pump, permease component [Energy production and conversion / Inorganic ion transport and metabolism].	1.34069e-42
NZ_CP009287.1\|WP_042265989.1\|646762_647704_-\|diacylglycerol-kinase-family-lipid-kinase	gnl\|CDD\|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	3.33822e-65
NZ_CP009287.1\|WP_025703954.1\|658623_659019_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	3.37988e-31
NZ_CP009287.1\|WP_025707913.1\|653175_653502_+\|cytochrome-C-oxidase-subunit-IV-family-protein	gnl\|CDD\|131954	TIGR02908, Cytochrome_c_oxidase_subunit_4B, cytochrome c oxidase, subunit IVB. This model represents a small clade of cytochrome oxidase subunit IV's found in the Bacilli. [Energy metabolism, Electron transport].	1.47513e-15
NZ_CP009287.1\|WP_042267768.1\|650701_652540_+\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|238832	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits in ubiquinol oxidase varies from two to five. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons from ubiquinol to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from ubiquinol on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. It is generally believed that the channels contain water molecules that act as 'proton wires' to transfer the protons. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are believed to be transferred directly from ubiquinol (the electron donor) to the low-spin heme, and directly from the low-spin heme to the binuclear center.	0
NZ_CP009287.1\|WP_025703956.1\|656850_657633_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293798	cd07712, MBLAC2-like_MBL-fold, uncharacterized human metallo-beta-lactamase domain-containing protein 2 and related proteins; MBL-fold metallo hydrolase domain. Includes the MBL-fold metallo hydrolase domain of uncharacterized human MBLAC2 and related proteins. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	1.01137e-56
NZ_CP009287.1\|WP_025707910.1\|649523_650573_+\|cytochrome-c-oxidase-subunit-II	gnl\|CDD\|224537	COG1622, CyoA, Heme/copper-type cytochrome/quinol oxidases, subunit 2 [Energy production and conversion].	9.70488e-75
NZ_CP009287.1\|WP_025703952.1\|659972_660875_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|226631	COG4152, COG4152, ABC-type uncharacterized transport system, ATPase component [General function prediction only].	3.67984e-126
NZ_CP009287.1\|WP_025703953.1\|659035_659968_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	4.23933e-56
NZ_CP009287.1\|WP_025707909.1\|647929_648268_-\|hypothetical-protein	gnl\|CDD\|227155	COG4818, COG4818, Predicted membrane protein [Function unknown].	1.29904e-25
NZ_CP009287.1\|WP_025703958.1\|655326_656253_+\|cytochrome-c-oxidase-assembly-factor-CtaG	gnl\|CDD\|131784	TIGR02737, Protein_CtaG, cytochrome c oxidase assembly factor CtaG. Members of this family are the CtaG protein required for assembly of active cytochrome c oxidase of the caa3 type, as in Bacillus subtilis.	1.50992e-95
NZ_CP009287.1\|WP_025708130.1\|645717_646311_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|181705	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated.	8.83861e-114
NZ_CP009287.1\|WP_025707912.1\|652546_653173_+\|cytochrome-(ubi)quinol-oxidase-subunit-III	gnl\|CDD\|239214	cd02863, Ubiquinol_oxidase_III, Ubiquinol oxidase subunit III subfamily. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Ubiquinol oxidases feature four subunits in contrast to the 13 subunit bovine cytochrome c oxidase (CcO). Subunits I, II, and III of bovine CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Subunits I, II and III of ubiquinol oxidase are homologous to the corresponding subunits in bovine CcO. Although not required for catalytic activity, subunit III appears to be involved in assembly of the multimer complex.	1.4796e-75
NZ_CP009287.1\|WP_025703957.1\|656278_656743_+\|DUF420-domain-containing-protein	gnl\|CDD\|377257	pfam04238, DUF420, Protein of unknown function (DUF420). Predicted membrane protein with four transmembrane helices.	4.9274e-40
NZ_CP009287.1\|WP_025703950.1\|662674_663442_+\|hypothetical-protein	gnl\|CDD\|367466	pfam03370, CBM_21, Carbohydrate/starch-binding module (family 21). This family consists of several eukaryotic proteins that are thought to be involved in the regulation of glycogen metabolism. For instance, the mouse PTG protein has been shown to interact with glycogen synthase, phosphorylase kinase, phosphorylase a: these three enzymes have key roles in the regulation of glycogen metabolism. PTG also binds the catalytic subunit of protein phosphatase 1 (PP1C) and localizes it to glycogen. Subsets of similar interactions have been observed with several other members of this family, such as the yeast PIG1, PIG2, GAC1 and GIP2 proteins. While the precise function of these proteins is not known, they may serve a scaffold function, bringing together the key enzymes in glycogen metabolism. This family is a carbohydrate binding domain.	5.37534e-17

>NZ_CP009287.1|WP_025707913.1|653175_653502_+|cytochrome-C-oxidase-subunit-IV-family-protein
MATEQHSASNGSVKHRHRQEGPQRHIVVFVFSVVLTLIAFAAVAAGGVNATFAVVLLLVMAVLQVFLQMGFWMHLKDKGHLLPIIFMLGGFFIAGTSIVMALYWVWWD
>NZ_CP009287.1|WP_025707912.1|652546_653173_+|cytochrome-(ubi)quinol-oxidase-subunit-III
MTTAQAEGAAGTLPHEPEKATLEGRNKVLAFWLFLGGESVLFGTLFATFLALRNQTNEGPSANELFHLPLVAAATFLLLVSSLTSVFAIQAMHRGKVAVLRNWLLVTVFLGLCFLVLEIYEFSVYVRHEEFGMTTSAFSSAFYTLVGFHGAHVAFGILWISVLIGQLVRKGLTVVTAPKIYVSAMYWHFIDVVWVFIFTVVYLLGKVG
>NZ_CP009287.1|WP_042267768.1|650701_652540_+|cytochrome-c-oxidase-subunit-I
MDWITTVDHKKIAILYLWAGGLFFGIGGLEAILIRIQLIKPMNTFLDAQTFNELITMHGTTMIFLGVMPVIFALMNAVIPLQIGARDVAFPFLNALGFWTFLFGGVLLNLSWIMGGAPDAGWTSYTPLSTIEYSGTHGVDFYTIGLQIAGLGTLIGGINFLATIITMRAPGMSFMRMPMFVWASFITSAIILFAFPAITVGLVLLTFDRILGANFFDTSAGGNSVLWQHIFWIFGHPEVYILILPAFGIISEVIPTFARKRLFGYSSMVFATILIAFLGFMVWAHHMFTTGLGPVANALFSVSTMLIAVPTGIKIFNWLFTMWGGQVRFTSPNLFAVGFIPTFTMGGVTGVMLASAPADFQFHDTYFVVAHFHYVIVGGLVLGLFAGLHYWWPKMFGRMLSETLGKWTFWTFIIGFHLTFFVQHFLGLMGMQRRVFTYLPNQQFDLLNLISTVGAGLMGVGMLIFLTNIFLTSRKPADAPDDPWEDGRTLEWAIPSPPPEYNFKQTPLVRGLDAFWKEKTSGHKTMTPAEPVGPIHMPSATILPFLMSVGIFIAGLGFMFSRDDFGNAFMGFMFNHYLVTAIGLVITFGSMLLRSLYDDHGWHIEPEELEGR
>NZ_CP009287.1|WP_025707910.1|649523_650573_+|cytochrome-c-oxidase-subunit-II
MMKTWQAGKRLLPMTAALGLILAGCGREDLSVLRPQGPAAESSFDLMKLSITIMIVVLLIVFSIAAYVLVRFRRKPDQREIPEQVEGSFKLEVLWTVIPLILVVVLAVPTVKAVFAAGNDHSNDKNAIKVKVTGHQYWWEFQYTDYGVTTAQDLVIPAGKDIAFELSTKDVLHSFWVPSLSGKMDTNPDGTTNRFSFSAPNEGVYRGKCAELCGPSHGFMEFKVKSVSEAEFEKWVKSMKSPAVLPEDPALAETFKSQCLTCHAVGDMPDLSSAPNLTGIGSRESVAGILLNDDTGVDGEPVLENLKTWLHDTPGVKPGNKMPDPKKDMGLSDEEIDGIAEFLAGYTLD
>NZ_CP009287.1|WP_019913840.1|648933_649122_+|hypothetical-protein
MASKGHNEVKESLREMTRIFRPKDPKKFVKEYVRKYRITGGYEEELTMVVEHELVRMNSSVS
>NZ_CP009287.1|WP_025707909.1|647929_648268_-|hypothetical-protein
MSPIRSSTGIPDHIAAALCYFFPFIGGIVFLALEKRSRFVLFHALQSLIAFGALMIAHVLCGFIPLLGPLAASLISLCSFAVWLLMIYHALGGRWYRLPWAGDIAERQLRQL
>NZ_CP009287.1|WP_042265989.1|646762_647704_-|diacylglycerol-kinase-family-lipid-kinase
MYLFIINPRSGGGTGGRTWHAVEAMLRSRGTAYEALFTQSADSAESQVLHALGRREDWHAAIVIGGDGTIHSVLGALRRRGVPLAVIPAGSGNDTARGFGIPLATEAALDTALQDRCLEADLLSGADGLTLTAVASGFDAQVAVNVNRSRYKRLCNAIGAGRLAYLIGILHTLMTFKPCRVSVTCDGKEQAFENAWLVSVCNLPSYGGGLLICPQAKADDGLLDVCVVHGVSRGQLLRLLPTVVKGKHTRLPFVTMLSGRSAAVRFAEPRHAIGDGESLGTVPQAVRCEPGALRVLSPLASAQGAAGPCSASG
>NZ_CP009287.1|WP_155990523.1|646470_646677_+|hypothetical-protein
MLTLYGRGCITDTSTFIGAIRQDKLFRTPVRFLTGLSSKNGMVTRNSGISVRNGFGNAEVAKERHGPR
>NZ_CP009287.1|WP_025708130.1|645717_646311_+|xanthine-phosphoribosyltransferase
MELLRHKVVSEGIVLGQGVLKVDSFLNHQMDPFLMREVGREFTRRFAGEEVTKVLTIESSGIAPGIMTALELEVPLIFARKQKSLTLTEDIFVEKVYSFTKKESNEITVSKKFIVPGERVLIVDDFLANGEAAFGLARIVEQAGGTVAGIGIVIEKAFQPGSQLLKEAGYRVESLVRIASLEEGVISFVEDEAELTD
>NZ_CP009287.1|WP_025708131.1|645367_645673_+|hypothetical-protein
MECIVHFEVDHTEGVKPLRGLLFLDEGQTPGEQELIDMFKDMKFAVRLDDREKLIFKPVNPGETYSQIRITGFDSGKPNSKEDHELKSLVGNLLPQKPAGL
>NZ_CP009287.1|WP_025703958.1|655326_656253_+|cytochrome-c-oxidase-assembly-factor-CtaG
MLGLSYFSFGELWSPLFLAVMLLLTAGYFVLIGPLSGRFQGSSRVPLWRRISFISGMLALYLAQAGPLSLLGHILFSFHMVSMAFSYLVAVPLIMLGLPDWCWRALLKGVLHPLRRVSFLAQPVVAALLFNGLFSLYHIPVIHDYVMLHFAVHRLYYAVLFLTSALMWWNLINPLPELRSLNGLGQIGFIFLNMVLLTPACGLIIFAGEPLYATYSDPQIWARAMGYCVSGSPAELLQAFGGPAFFGWLSPKVDQQVGGIAMKFIQEFIFASMLAYVFYHWYKKENGQDEAEVSAPSSELEKRVLTRV
>NZ_CP009287.1|WP_025703957.1|656278_656743_+|DUF420-domain-containing-protein
MDIFTVFPTISTSFIVISAVLVAIGWRLIIKGKREAHKKTMIAAAVAAVLFFIVYMSRTVFVGNTSWGGPKDLSLLYHIFLIFHIVLATVAAVFGITTLTLGFKAKYAKHRKWGRVTSVIWFITAITGVAVYVLLYIFYPGGHTKPVWEVILGA
>NZ_CP009287.1|WP_025703956.1|656850_657633_-|MBL-fold-metallo-hydrolase
MTNDPWFTVQPIDENTFAISEYGHWEKVHSFLLLGQDRAALIDTGLGIGNIRTITDQLTDLPIDVLTTHVHTDHIGSHGEYERIYVHEGDLDWLVHGIKGLSLEQIRRDIGRDISQPVPEGFDPQAYRPFQGQPAGLLQDGDTVELGGRALAVYHTPGHSPGHLAFWDKLNGYLFTGDLLYDGTPIYAFYPSTSPVDLVGSLERIAEIEGVRRIYGSHNTLGLNPQILSEVKHAVQLLRKNNLVRFGTGLHTFSGFSIQF
>NZ_CP009287.1|WP_025703955.1|657834_658563_+|hypothetical-protein
MTTIKDAWVIVRSDFRADKLKLLRALIFAILFTGYMSIFSEMIIGDVLESGDGKILADFLLLSMTPMLGFTFSRRTMKYLSEDSYTRMLAYMRSLPVPAAVVLCKRKLHTVFAFTLNGVLYFGLIYAMSGQLRSELSVPAYLAFALTWVGSALVMTGLYIFIELMVSGKTYCWLLLLIMLLCLGVALLVGEAGGNLFLYSVRYAKEWGFASPLMWATLLLGTVSVQLFSKWTIYRLKSRDLV
>NZ_CP009287.1|WP_025703954.1|658623_659019_+|GntR-family-transcriptional-regulator
MWIPIQINENSAEPLYHQIETQLKSLIISGVITEGTLLPSIREFAGDLKCSVITVRRVYQDLENEGLLRTRQGTGTFVSHVGEGAMEGYKNEAIRKALESAVDVALSVQCSEAELTELFREIVKHKYAAQA
>NZ_CP009287.1|WP_025703953.1|659035_659968_+|ABC-transporter-ATP-binding-protein
MVQQAIELRNVSKKRRRGKTIGPLDLNLPQGYITALVGQNGSGKSTMLHMLLQLTFPDEGEIRWFESPYADGLPLALRQRIAYVPETSQAEEKYWNAAEAAEFRRHWYPAWDQGYFEELLAKFEVPQDAKLGKMSKGERRKFEIAAALAARPQLLLLDEPSSGLDPFAWKAMIETLRKYMDETSATVVISTHIVEEVRRLADYIVLMHHGQLLGMAEKDSLFGSWSEISVQVEDEEELRELAEELPGALHFTIETPGVASFITPKAQQNEKRIHDLGVKVIKSRILELDEILSLWTQGHRPTLIDQERGD
>NZ_CP009287.1|WP_025703952.1|659972_660875_+|ATP-binding-cassette-domain-containing-protein
MEALKLEQVVKQYGDKTAVNGISLKVERGEIYGLLGANGAGKTTTMRMVLGLIYPDGGKILYNGKPFSDELQHMMGYLPEERGLYPKVKVSDQIIYLARLRGMSAGDAEKSLRFWLERFDVPEYYNKKIEELSKGNQQKMGFIAAVVHKPQILILDEAFSGLDPVNVELLKDTVKELRDQGTSILFSTHRMEHVEELCRNITILDRSNTVVQGDIREIKKGYPREEVALRTAGDLSGLDKIPGVSAVQKQERGYLLSISEIGAAQRILQYAMAAGEVEHFEIKEPTLNQIFIRAVGESNE
>NZ_CP009287.1|WP_025703951.1|660867_662166_+|ABC-transporter-permease
MNKMGTIISFTFKNKVRTKSFLITTLILILLISIGMNIPYFIKVFQGDDGAKETQIGVVAEQGNRAAELLLAYAPPATAAADEDTDTVAFKAFASADDAALKQGLDDEKIEGYLTFDAKGSEGVPPVTYHSKDGELDKDLKTYLQGALQQINTQLIAGDKLTQEQVAAMFAPVSIGTQQLSTDGTDGAAPDESKPAINYVIVYVLLILFFMSITMTGNMIAAEVTSEKSSRIMEILITSASPLTQMFGKVIGIFLVGLMQIAIISASIAINLMLPHNASILTDFDLDLGQLNYGILVYGFILYVLGYFLYALMYAAVGSIVSRTEDLGQALMPVMMCTFVAFYIPLFSISAPDTMLIKVASFVPITSPLSMVLRIGVGEVAFWEIAVSLVILLATTFGLGWLAAKIYRTGVLMYGKRPSIKEIRKAMKAYKI
>NZ_CP009287.1|WP_025703950.1|662674_663442_+|hypothetical-protein
MKAIKKLFAGLMMFTLIFGVSFMGSAFASGDEVKLIDSDVSIMYKNGYVGFSGNIDVANLGPVKNVTVHYTTDNTNWFDTTASYVGPTDANREKWHFGISRTGSSTDHLELKDLKFIKFAIKYEVNNQIYWDNNGGANYYNEVNSSYPVSSVILGAPNVLNDKSTLSNGEFSGYIYVKNLDPTKTVKVVYTTDNWATTHEAFATYGGSVNNFKSVESWNYSINVPGATNVKYAISYTTGGQTYWDNNYGHNYEVN
>NZ_CP009287.1|WP_025703949.1|664282_664528_-|hypothetical-protein
MEKENDSIIISDREFLNLLQEAKRKDPAAILQLVNLFKEDILKVSRYIHLPAEDAVSMVTLEFLELIQGKNHGLIQDEKHG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_3

755469-755542

Orphan

Consensus_repeat	Method
AATCAGTTAACCTTTTTCCACTT	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_CP009287_3

>merge|NZ_CP009287|3|755469-755542|CRISPRCasFinder
AATCAGTTAACCTTTTTCCACTTCATCTTCGGAGAACAAGATCCTGGAGCAAATTAGTTAACCTTTTTCCACTT

>NZ_CP009287|3|3|755469-755542|CRISPRCasFinder
AATCAGTTAACCTTTTTCCACTT	CATCTTCGGAGAACAAGATCCTGGAGCA
AATTAGTTAACCTTTTTCCACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025704259.1\|749145_750237_+\|D-alanine--D-alanine-ligase	unknown	unknown	gnl\|CDD\|234993
NZ_CP009287.1\|WP_025704254.1\|753092_754388_+\|copper-amine-oxidase	unknown	unknown	gnl\|CDD\|377924
NZ_CP009287.1\|WP_025704255.1\|752727_752985_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704256.1\|751825_752710_+\|inositol-monophosphatase	unknown	unknown	gnl\|CDD\|238817
NZ_CP009287.1\|WP_052415749.1\|759687_763983_+\|2-hydroxyacyl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|224835
NZ_CP009287.1\|WP_025704258.1\|750285_750603_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704252.1\|755851_756472_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707967.1\|757945_758998_-\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_CP009287.1\|WP_025704260.1\|748097_749126_+\|amidase-domain-containing-protein	unknown	unknown	gnl\|CDD\|378910
NZ_CP009287.1\|WP_025709474.1\|767451_768402_-\|YafY-family-transcriptional-regulator	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP009287.1\|WP_025703971.1\|743643_746388_-\|aconitate-hydratase-AcnA	unknown	unknown	gnl\|CDD\|236445
NZ_CP009287.1\|WP_025709478.1\|765018_765474_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009287.1\|WP_025709480.1\|764095_764782_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_081954723.1\|768548_769844_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP009287.1\|WP_036703712.1\|754491_755100_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP009287.1\|WP_081954722.1\|746797_747061_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042266035.1\|756606_757923_-\|glutamate-1-semialdehyde-2,1-aminomutase	unknown	unknown	gnl\|CDD\|183493
NZ_CP009287.1\|WP_025707966.1\|759100_759568_+\|thioredoxin-dependent-thiol-peroxidase	unknown	unknown	gnl\|CDD\|224146
NZ_CP009287.1\|WP_025709476.1\|765470_767003_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP009287.1\|WP_025704257.1\|750599_751607_+\|UV-DNA-damage-repair-endonuclease-UvsE	unknown	unknown	gnl\|CDD\|235029

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025704259.1\|749145_750237_+\|D-alanine--D-alanine-ligase	gnl\|CDD\|234993	PRK01966, ddl, D-alanine--D-alanine ligase.	8.42472e-169
NZ_CP009287.1\|WP_025704254.1\|753092_754388_+\|copper-amine-oxidase	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	3.5835e-20
NZ_CP009287.1\|WP_025704257.1\|750599_751607_+\|UV-DNA-damage-repair-endonuclease-UvsE	gnl\|CDD\|235029	PRK02308, uvsE, putative UV damage endonuclease; Provisional.	2.9671e-126
NZ_CP009287.1\|WP_025707966.1\|759100_759568_+\|thioredoxin-dependent-thiol-peroxidase	gnl\|CDD\|224146	COG1225, Bcp, Peroxiredoxin [Posttranslational modification, protein turnover, chaperones].	3.94576e-81
NZ_CP009287.1\|WP_052415749.1\|759687_763983_+\|2-hydroxyacyl-CoA-dehydratase	gnl\|CDD\|224835	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism].	9.05897e-144
NZ_CP009287.1\|WP_025707967.1\|757945_758998_-\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	9.17058e-59
NZ_CP009287.1\|WP_025704260.1\|748097_749126_+\|amidase-domain-containing-protein	gnl\|CDD\|378910	pfam12671, Amidase_6, Putative amidase domain.	2.11623e-39
NZ_CP009287.1\|WP_025709474.1\|767451_768402_-\|YafY-family-transcriptional-regulator	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	3.07047e-68
NZ_CP009287.1\|WP_025703971.1\|743643_746388_-\|aconitate-hydratase-AcnA	gnl\|CDD\|236445	PRK09277, PRK09277, aconitate hydratase AcnA.	0
NZ_CP009287.1\|WP_025709478.1\|765018_765474_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.24574e-16
NZ_CP009287.1\|WP_081954723.1\|768548_769844_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.00713e-43
NZ_CP009287.1\|WP_036703712.1\|754491_755100_+\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	1.54575e-58
NZ_CP009287.1\|WP_025709476.1\|765470_767003_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	9.49152e-114
NZ_CP009287.1\|WP_042266035.1\|756606_757923_-\|glutamate-1-semialdehyde-2,1-aminomutase	gnl\|CDD\|183493	PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional.	0
NZ_CP009287.1\|WP_025704256.1\|751825_752710_+\|inositol-monophosphatase	gnl\|CDD\|238817	cd01639, IMPase, IMPase, inositol monophosphatase and related domains. A family of Mg++ dependent phosphatases, inhibited by lithium, many of which may act on inositol monophosphate substrate. They dephosphorylate inositol phosphate to generate inositol, which may be recycled into inositol lipids; in eukaryotes IMPase plays a vital role in intracellular signaling. IMPase is one of the proposed targets of Li+ therapy in manic-depressive illness. This family contains some bacterial members of the inositol monophosphatase family classified as SuhB-like. E. coli SuhB has been suggested to participate in posstranscriptional control of gene expression, and its inositol monophosphatase activity doesn't appear to be sufficient for its cellular function. It has been proposed, that SuhB plays a role in the biosynthesis of phosphatidylinositol in mycobacteria.	8.5958e-108

>NZ_CP009287.1|WP_036703712.1|754491_755100_+|peptide-deformylase
MLLSSTKFKAEYMITMDDIVREGDSVLRTVAEPVQMPLQAEDQEALQCMMQFLKNSQDPEVSAKFKLRSGVGLSANQIGLLKRMFVMYLRDDKGNMVEHAWVNPKVISHSVAMIYLPESEGCLSVDRPVHGFVPRYESVKVKGYNMTGKEVVMKFKGYQAIVVQHEIDHLDGIMFYDRINEENPFKLPQGVEIRSLYEQKSR
>NZ_CP009287.1|WP_025704254.1|753092_754388_+|copper-amine-oxidase
MLSAWKKMYAAGTSSLLLFTLLISAGAGSASAAEAAAAIQGSEQDVFRIVALGDSITAGYEPGMTDPNVKPYGYAERLLEQGWYHGRSVLSNYGILGLTTTGLLNYTAAIKDGAVTTADGIQAGLPDPRINQFAALTPQIKTELGEADLVTLTIGGNDVSSLLVTAKDLTEEAFKAQLDQLLASYSSNVKVALENIRAVNAKATIMLADQYQPAPKIAVSSSYLKLMSAAQQFTKAAENVAASLNQPDAPVKVAHVAEAFAGVEASRTHIISAGAADFHPTQLGYETIARVFAETYWGEYRVPSVSAWTAASAPMSIVVKGVEVNTPNKPVLKNGQNFLALKDILNAVGATGKWDNKTQSAAIVYGGRTVVITIGSQTIKVNGAAVAIDTPAFLQKIGNEDKTYLPLAALATGLGFDVNYSSKLRTAFINP
>NZ_CP009287.1|WP_025704255.1|752727_752985_+|hypothetical-protein
MSDKDDLERKLSELLEDGEMEEADRTAKEIRQISPKYEIRIQTTLDPIVEETLRYRKIGHELDDRYDKYLERAKKDHGSADGDNS
>NZ_CP009287.1|WP_025704256.1|751825_752710_+|inositol-monophosphatase
MNPTNSDNRNDREPYVVTSKGHTAAAINAAAKAGEWIKNRQGHVKELGSKTSAQDLVTEVDKGVEQMIRRLILTHYPDHAILGEESVQPGADALTAALEEGQKHDYLWIVDPIDGTTNFVHGFPFYCVSIALVVKGELTVGVIYDPIRDEMFVAEKGKGAYMHGIPTSVSAEADPGSSLVAMGFPPDRTFAQPANMAGLQQILPQIRGVRAGGSAALHLAYVAAGRVDGYWEVGLSPWDCAAGVLLVLESGGKVTDTLGNPYDIGTRHVVASNGRIHDFLVASLGEAKATGYNK
>NZ_CP009287.1|WP_025704257.1|750599_751607_+|UV-DNA-damage-repair-endonuclease-UvsE
MIVRFGYVAMSTVIPDCSPSKTMTMASFNKLNDREAALRRLETIARGNLHNTLRLLKHNVGSDIQVYRLTSKLIPLATHPDLQDWNPFAALAADFAEVGSYVKKHGLRVSFHPDHFTVLSTPRPEVLASSVRDLQHHVDMLTAMDLPATAKNNIHIGGAYGDKPAAAARFLEHFAELPLELQERTTLENDDKTFNAPETLEVSRRLGVPMVLDIHHQWVNNEGELPWELWPEIMKTWQTSLALKDVLPGEMLPPKIHVSSPRSPSDPRSHADGVEPAPLLAFLKRIAADTPAVDAMIEAKAKDGALFGLMEALKELAEAGNGITVLDGASVNIEP
>NZ_CP009287.1|WP_025704258.1|750285_750603_+|hypothetical-protein
MGFQSEFNSVCKFKNDQELYELLEYGRTKMVKQGFRVYPTGQKVIAYTPENVAIAIVKISASIAEINFQGNEVTAVEMDLVRKLNEEESRVQTALAYEMFFGEEG
>NZ_CP009287.1|WP_025704259.1|749145_750237_+|D-alanine--D-alanine-ligase
MGDTKLTVGLVYGGKSGEHEVSLQTAFAVMNAFDYAKYEIIPFYISKQGLWKVGAALDAPFGTIEQLKLGGEAGDMSMALNAVFSGLSGGDPLIDVMFPLLHGTNGEDGTIQGLFEMANIPYIGAGVLASSAGMDKVVMKKLFGEAGLDQCEYCYFNVSAWKRKSHELIISLEDKLGYPVFVKPANLGSSVGISKAVDKESLIKAVELAFRYDTKVIIEEFVDAREVEVSVLGNEEPEASVPGEIVSSGEYYDYAAKYTDGKSQMLIPAPVDPEVADRLRESAIQAFRAIEGSGITRADFFLRKSDGKILINEVNTMPGFTPYSMYPLLWRETGVSYQALLDRMIELALERYHFKQGLKYDNE
>NZ_CP009287.1|WP_025704260.1|748097_749126_+|amidase-domain-containing-protein
MEQQWKQSLYVYVDQVNKGRVAPGAEQQRSTVRNPQFLLEQGERSRRLAQWYEQRGITPLRSETGVRTLRTVRQNPSEVVADVALHSALYYEKGGITHREDVIESERLTFVLEGSTWEIAAVERSVPERNSMRRVVGAEPVLRLSKWGEALPVPQPSQPLLNKSILRGITSSKEVRYRREDAAAYADRWWKDGNPEFEVFEVDCTNYVSQCLFAGGAPINYTGKRETGWWYKGYNGAQEWWSFSWAVSDSLQRYLSADRSSGLRAEAVERADQLMLGDVIQYDWDGNGHYQHSTIVTAFDAAGQPLVNARTVSSRHRYWDYRDSYAWTDRTAYRFFHINDYL
>NZ_CP009287.1|WP_081954722.1|746797_747061_+|hypothetical-protein
MGNNGRNAVVEAPQAGNGGNNGRNAVVEAPQAGNGGNNGRNAVVEAPQAGNGRNNGRNAVVGAPQAGNGRNNGRNAVVGAAARVKYG
>NZ_CP009287.1|WP_025703971.1|743643_746388_-|aconitate-hydratase-AcnA
MPSKDHFSLARTLESGGKSYRYYHLNSLEKQGAGDISSLPFSIKVLLEAAVRQYDGRAITEEHVKQLAGWSGGIDRNKEIPFIPARIVLQDFTGVPVVVDLAAMRDTVKKAGGDPKKINPLVPVDLVIDHSVMVDAFGTADALEYNMNVEFERNEERYRFLRWAQTAFNNFRAVPPATGIVHQVNLEYLASVATTKNVDGETVVYPDSLVGTDSHTTMINGLGVVGWGVGGIEAEAGMLGQPLYFVTPDVVGFKLTGSLVEGATATDLALTVTQMLRKKGVVGKFVEFYGPGLANISLADRATVANMAPEYGATIGFFPVDDETLAYLRSTGRPDELVELVGDYYKAQGMFRTSDTPDPAFTDTIELDLASVVPSLAGPKRPQDRVELTHMKENFEGIIRTPVDKGGYGLSDEKISEVVEVQHKNGTTSKLSTGAVVIAAITSCTNTSNPSVMLGAGLLAKKAVERGLTKPGYVKSSLTPGSLVVTEYLEKADLLKPLEALGFYLAGYGCATCIGNSGPLPDEVSQAITDNDMTVAAVISGNRNFEGRVHAQVKANYLASPPLVVAYALAGTVNIDLKTEPLGYDPQGEPVYLADIWPTSAEIREAISLSLSPEMFRRKYENVFTANERWNSIPVPEGELYEWDDNSTYIQNPPFFENLADGVGDIKDIRNARVLALLADSVTTDHISPAGNISTSGPAGEYLRSHGVERADFNSYGSRRGNHEVMMRGTFANIRIRNAVAPGTEGGVTTFLPSEEVMSIYDASMLYQSAGQNLIVIAGKEYGTGSSRDWAAKGTLLLGVKAVIAESFERIHRSNLVGMGVLPLQFQEGHGWSSMGLTGRETFNITGLGNDVQPGQELTVTATREDGTQFEFPVIARLDSTVDIDYYRNGGILQTVLRQMLADAATSDSALPVE
>NZ_CP009287.1|WP_025704252.1|755851_756472_+|hypothetical-protein
MGWGRMPIRGMQNEYNDEAKQIDEQILELYRQRKAVSGGKGLFPDTDTIEEWATRLELQPGEITFILSNLNEARPRRHFWEEPGALLGVLPIMQTTLQDDAEYTLTHALQHEKLSIVTLEIKYLKETAGHVNVNAELMLAVVGDTDYEVDGHGARGGGAQLQMQFMVWPPLPEDLSFVEFSLVPASNRFMRPIREEVILDKQIDFH
>NZ_CP009287.1|WP_042266035.1|756606_757923_-|glutamate-1-semialdehyde-2,1-aminomutase
MNRTTSEHLYEEALQHIVGGVNSPSRSFKAVGGGAPVFMKRAGGSRFWDEDGNEYIDYLAAYGPIITGHAHPHITAAITQAAENGLLYGTPTQLEIKLAKMLKKAIPSMDKVRFVNSGTEAVMTTIRVARAYTKRSKIVKFAGCYHGHSDLVLVAAGSGPSTLGIPDSAGVPASIAQEVITVPFNDLDALREALDKWGGDVAAVMVEPIVGNFGMVMPQPGFLEGLCKQAHDNGSLVIYDEVITAFRFHYGSAQTYAGLSNHEDIIPDLTALGKIIGGGLPIGAYGGRKHVMEQVAPLGPAYQAGTMAGNPASISAGIACLEVLAAEGVYDEMERLAIRLTEGLQAAADGHGIPLTINRIRGAFSTHFCNHPVTNYDEAQDTDGELFASFFRHMLNRGINLAPSKYEAWFLTTAHTDADIDATLEAAEASFQAMAEEK
>NZ_CP009287.1|WP_025707967.1|757945_758998_-|LCP-family-protein
MPPRKKRHAKAGKSKKKPLLWTLAIILLLIIGGIVYYFAEIYNQMDNLHKTGENSPFAAVPSPSAETVQPPKWEGTEPVNILLMGVDARGVKKGEVPRSDTMLVASLDPVKKKFYVFSILRDTYVSIPEHGKERINTAITHGPNTAMQTVSDLLGIPIQYYVYTDFQGFIKLVDAVGGVDYEVEKDMVYKTKADGPEYDIDLKKGFQHLDGSMALQYVRFRHDATSDFTRTERQRGFLKAVADKVISTTAIIKLPTILSQVTPYIDTNLDVNDMWKLATVGYDSSMGGSAQIPPMNLLTEEKTSGGSAVLGISSENKLKEFVQDTLAGPEPSPSPDASPGSSPSASAGSK
>NZ_CP009287.1|WP_025707966.1|759100_759568_+|thioredoxin-dependent-thiol-peroxidase
MNEIKIGQEVPDFTLPASTGQDISLSDYRGRKVVLYFYPKNMTPACTQEACEFRDAADPIARGNAVVLGISPDSLSSHAKFIEKNSLPFPLLSDEEHSVSGLFGVWQLKKLYGKEFMGIVRSTFLIDEQGILVKEWRKVRVKGHVEALLGEIMNK
>NZ_CP009287.1|WP_052415749.1|759687_763983_+|2-hydroxyacyl-CoA-dehydratase
MMMLRIGLDVGSTTAKLVVMEHDVIVYQDYVRHFSDIKKAALSLLSDVRDRFPDREAALTVSGSSGLSLSKLGEVPFVQEVIACTKAISELIPQCDTAIELGGEDAKIIYLSGGIEQRMNTACAGGTGAFIDQMASLLQTDPAGLNALAEQHERIYPIASRCGVFAKSDVQPLLNEGARREDVAASIFQSIVNQTISGLACGRPIRGRVAFLGGPLTFLPALRKRFAETLGLSDSDVLFPEHSQYFVAIGSALSQTDPLVLPLSGWMARLDAVDFSADRAEDAELQPLFASPEDLEQFRLRHSQAAAPRSELDTYQGPCYLGIDAGSTTTKLVITGAADEILYTFYGSNKGNPLQSVSDALKEIYRILPEGCHIAGAYATGYGEGLVKAALRTDGGEVETVAHYKAASKFMPEVDFILDIGGQDMKCIKIRGGAIDSLMLNEACSAGCGSFLESFASALELGIGEFAAAALESTEPVNLGSRCTVFMNSKVKQVQKEGATLADLSAGLAYSVIKNALQKVIKIRNADDLGRNIIVQGGTFYNEAVLRAFELLTGRTVVRPDIAGVMGAYGCALIAREHAGLDGFSTLLGPEELEAFKYEVSPGRCRLCANNCALTISRFPDKSFHVTGNRCERGAGGKKEKNTLPNLMQYKYERFFDYEGLPVEQAERGTVGIPRTMNMFENYPFWHTFFTTLRYRTVLSPKSSKKLYESGMDTIPSESICYPAKMAHGHVQSLLGKGVDFIFYPAVVYEKKEDDAAQNHFNCPVVASYPEVIRNNMDGLKEKNIPLVSPFLTFDDIPALTRVLVKTFMDIPKEEIAAAVQTGLAEAERAKADLRNKGEETLEFLTHSGTKGILLCGHPYHADPEINHGIAEMITGMGLAVLTEDSVCHLDRSEGEVGVVNQWTYHARMYRAARLAASRNDLELVQLTSFGCGIDAITCDAVQEILERNNKVYTLIKIDEISNLGAARIRLRSLLAAMREREKGDVKPQLLYKTQANVPFTKEMKETYTILAPQMSPIHFELFERVFRDAGYRLKILESTGPKETEEGLRYVNNDACYPAIVTIGQMLSALKSGDYDPDRTAVIMSQTGGGCRATNYISLLRKALKDSGLGQIPVISLNASGMENQPGFRISLRLANRLIAAACYGDLMMRLLHRFRPYEVIPGSAQALFRKGMDRCKSSLSTFSFREYKRLTREIVAEFVQLPVVKTVKPQVGIVGEILIKFHPDANNHIIEMIEAEGGEAVMPDFLDFIFYCVYNPIYKAEQFGKSRKLGFFNPMLISYLEIYRKPVKAALEEAGLAKGRENIYGLAEKASRLVSVGNQMGEGWFLTAEMMDLLDNGVNNIACIQPFACLPNHITGRGMIKGLKDLYPGANIAAIDYDAGVSVVNQANRIKLMMSIASGLASSTPPPAAKMKKSSTMKPVVVGSARSDL
>NZ_CP009287.1|WP_025709480.1|764095_764782_-|hypothetical-protein
MSLEARKIWNANHQQLTGIITKPEEHANAVALILELHDCLYASRGNNPEQTNYEDDLLKDLLEQTMRSYPVHTANSSNSIVWHIWHSARIEDITMNILTADRDQILHSEHYADKLHTPFIHSGNGMSEQELAEFSAAVDVEALLDYRQAVAAGTRSIITGLQPGQFRKKPAPAQISRISEEGAVKESEQWLINYWGSKTIAGLVLMPATRHNFVHLNKAMRVKLKLQK
>NZ_CP009287.1|WP_025709478.1|765018_765474_+|MarR-family-transcriptional-regulator
MMEDREQQLDDIFSSFRCIIHNFQQLMWKDAEKLNITSTQLMVLRKLEAHPDVGITELADLLHLGNSAASGVVDRMVKAGLITRQRSESDRRIFKLAMTDKGREIREQSKQSLRSHLEPLSNIPAEDARELLRLHREIIKILEQGRENNKL
>NZ_CP009287.1|WP_025709476.1|765470_767003_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MSTITANAAAPSKTIRRGPIIAALLIGAFVALLNQTLMNVALPKMMEDLKIAANTAQWLTTGFMLVNGVLIPISAYLVEKFTTRQLFTTAMMLFSIGTLVCAIGTGFEMIMVGRVIQAVGAGILMPLMNIVFLRIFPIEERGKAMGLMAVAMIFAPAVGPTLSGWVVQNYSWRVLFYIVLPLAIFSTLLGMKTMQNVGKLTSPRLDKLGVVLSTLGFGGLLYGFSDAGTDGWNSATVYACLILGVVALALFVWRELTTDKPLLEFRIFRYNMYSLTTVINIIVTMALYSGMILLPIYLQTIRGFTPMESGLMLLPGAILMGVMSPITGIIFDKIGARWLSVIGLIITTVTTWEFSQITHTTTYTHLILTYTARMFGMSMLMMPIVTAGLNQLPQRLASHGTAMSNTLRTVGGALGMALFVSLMTNRTKSNITEAVMSGSVSQTDKAAMLKLTQDATINGITHAFTVATWVTVVALVLALFIKKTSPQPDFLQTEETESVQQPSKVNSQQA
>NZ_CP009287.1|WP_025709474.1|767451_768402_-|YafY-family-transcriptional-regulator
MKIDRLLSIVILLMNRPLIQAKELADMFEVSVRTIYRDIDSINGAGIPVVTYQGANGGIGLMEGYRLDRNVLTERELADIFTALQSVSSYGGGEHNLLMQKISSVIPPSKSHAFRSKTTQLIVDFSPWGLQGPLEERLALLKEALEESTVVAFDYVSADSQISHRIVEPYTLVHKGAGWYLYGFCTERQDFRLFKLLRMKSLVKGTQSFERLDIPLQDLPWTEGWKEPLNTQTVVLHFSAEGRHLAEDYFDCEELEADGNGGYTVRLAYAENNWLYGFLLSFGTVVEVLEPEPVRRRLAGLAAEIAAKYNAEVMPK
>NZ_CP009287.1|WP_081954723.1|768548_769844_+|MFS-transporter
MNINITNNRSTEMLKQRSKGYSRLFAAGLVNGIGDRFSSVAMLALILQVTGSGMAVGISLGMRVLPFLFMAPLGGMLAGRLPRKTIMMAVDLLRVPVALSFLLVDGAGRLWLLYAGSFIMAAGEALYSPVRKSSIPLLAGPDSLHKINSLEQLMTGCVLILGAFTGGLVSLWWGPEMAFVANAASFLLAALLVWGISFPAAVPSGTELRADTIPAEPVIESSHLKKTGRWQSLKVLIGGSQVLQIIIAYELLVPIINGWDNVLISVYAVQVFHAGDVGVGAFYAALGIGLSLSFFAGRLLKRRLLGIALAGLLMEGILLMCISGSSHFGVAFVLYILLSLCGGIGSACLDTLVMRETPAAQQPVVFGILSALGGSLIGVSMLSAGWLLEAVEPRALGFAGGAGFAGVAWLLGVLAWLPRYRKKMPRKLRRQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_4

968010-968083

Orphan

Consensus_repeat	Method
AATTAGTTAACCTTTTTCCACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_4

>merge|NZ_CP009287|4|968010-968083|CRISPRCasFinder
AATTAGTTAACCTTTTTCCACTTCACCTGTGGAGAATAGGGTGTACGAGCAAATTAGTTACCCTTTTTCCACTT

>NZ_CP009287|4|4|968010-968083|CRISPRCasFinder
AATTAGTTAACCTTTTTCCACTT	CACCTGTGGAGAATAGGGTGTACGAGCA
AATTAGTTACCCTTTTTCCACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_036707073.1\|966012_966894_+\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|350148
NZ_CP009287.1\|WP_036707068.1\|964257_965145_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP009287.1\|WP_025708848.1\|959355_960951_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP009287.1\|WP_025708852.1\|956781_957948_+\|DUF4317-domain-containing-protein	unknown	unknown	gnl\|CDD\|379500
NZ_CP009287.1\|WP_025708851.1\|958048_958582_-\|NAD(P)H-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|376808
NZ_CP009287.1\|WP_042266078.1\|966959_967850_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_155990552.1\|965201_965972_+\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_036703223.1\|975489_978843_+\|HEAT-repeat-domain-containing-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703765.1\|970725_972558_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_051424801.1\|962840_964244_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP009287.1\|WP_025703767.1\|974117_975350_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703766.1\|972533_974093_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|275228
NZ_CP009287.1\|WP_025708850.1\|958806_959175_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224647
NZ_CP009287.1\|WP_025703764.1\|969507_970533_+\|glycoside-hydrolase-family-88-protein	unknown	unknown	gnl\|CDD\|226678
NZ_CP009287.1\|WP_025703771.1\|981946_982480_-\|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl\|CDD\|376450
NZ_CP009287.1\|WP_025703770.1\|980744_981785_+\|NAD(P)-dependent-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176188
NZ_CP009287.1\|WP_025703769.1\|979361_980489_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP009287.1\|WP_081759031.1\|960953_962714_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP009287.1\|WP_025703763.1\|968371_969313_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP009287.1\|WP_025703768.1\|978823_979288_-\|acetyltransferase	unknown	unknown	gnl\|CDD\|182510

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_036707073.1\|966012_966894_+\|family-43-glycosylhydrolase	gnl\|CDD\|350148	cd18827, GH43_XlnD-like, Glycosyl hydrolase family 43 protein such as Aspergillus niger DMS1957 xylanase D (XlnD); includes mostly xylanases. This glycosyl hydrolase family 43 (GH43) subgroup includes enzymes that have mostly been annotated as xylanases (endo-alpha-L-arabinanase, EC 3.2.1.8). It belongs to the GH43_bXyl-like subgroup of the glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) which includes family 43 (GH43) and 62 (GH62) families. The GH43_bXyl-like subgroup includes enzymes that have been annotated as xylan-digesting beta-xylosidases (EC 3.2.1.37) and xylanases, as well the Bacteroides thetaiotaomicron VPI-5482 alpha-L-arabinofuranosidases (EC 3.2.1.55) (BT3675;BT_3675) and (BT3662;BT_3662). GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	9.07439e-168
NZ_CP009287.1\|WP_036707068.1\|964257_965145_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.66269e-82
NZ_CP009287.1\|WP_025708848.1\|959355_960951_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	5.49959e-47
NZ_CP009287.1\|WP_025708852.1\|956781_957948_+\|DUF4317-domain-containing-protein	gnl\|CDD\|379500	pfam14199, DUF4317, Domain of unknown function (DUF4317). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 225 and 451 amino acids in length. There is a single completely conserved residue P that may be functionally important.	5.38699e-138
NZ_CP009287.1\|WP_025708851.1\|958048_958582_-\|NAD(P)H-dependent-oxidoreductase	gnl\|CDD\|376808	pfam02525, Flavodoxin_2, Flavodoxin-like fold. This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) EC:1.6.99.2. These enzymes catalyze the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species. This enzyme uses a FAD co-factor. The equation for this reaction is:- NAD(P)H + acceptor <=> NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy. The family also includes acyl carrier protein phosphodiesterase EC:3.1.4.14. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP. This family is related to pfam03358 and pfam00258.	9.33332e-46
NZ_CP009287.1\|WP_155990552.1\|965201_965972_+\|ABC-transporter-permease-subunit	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.06098e-71
NZ_CP009287.1\|WP_051424801.1\|962840_964244_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	6.35586e-77
NZ_CP009287.1\|WP_025703766.1\|972533_974093_+\|AAA-family-ATPase	gnl\|CDD\|275228	TIGR04435, ABC_transporter, restriction system-associated AAA family ATPase. Members of this family are AAA family ATPases by homology. They occur regularly in a conserved gene neighborhood with the restriction (R), modification (M), and specificity (S) proteins of an apparent type I restriction enzyme system, plus one additional uncharacterized protein. It is not clear whether members of this family contribute to restriction per se, or to another process such as transfer of mobile elements.	1.93497e-13
NZ_CP009287.1\|WP_025708850.1\|958806_959175_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|224647	COG1733, COG1733, Predicted transcriptional regulators [Transcription].	1.23162e-39
NZ_CP009287.1\|WP_025703764.1\|969507_970533_+\|glycoside-hydrolase-family-88-protein	gnl\|CDD\|226678	COG4225, COG4225, Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only].	4.68926e-95
NZ_CP009287.1\|WP_025703771.1\|981946_982480_-\|CDP-alcohol-phosphatidyltransferase-family-protein	gnl\|CDD\|376450	pfam01066, CDP-OH_P_transf, CDP-alcohol phosphatidyltransferase. All of these members have the ability to catalyze the displacement of CMP from a CDP-alcohol by a second alcohol with formation of a phosphodiester bond and concomitant breaking of a phosphoride anhydride bond.	1.35564e-09
NZ_CP009287.1\|WP_025703770.1\|980744_981785_+\|NAD(P)-dependent-alcohol-dehydrogenase	gnl\|CDD\|176188	cd05285, sorbitol_DH, Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.	8.91005e-172
NZ_CP009287.1\|WP_025703769.1\|979361_980489_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	3.90903e-43
NZ_CP009287.1\|WP_081759031.1\|960953_962714_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	7.66311e-48
NZ_CP009287.1\|WP_025703763.1\|968371_969313_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	6.28879e-27
NZ_CP009287.1\|WP_025703768.1\|978823_979288_-\|acetyltransferase	gnl\|CDD\|182510	PRK10514, PRK10514, putative acetyltransferase; Provisional.	2.14766e-45

>NZ_CP009287.1|WP_042266078.1|966959_967850_+|hypothetical-protein
MPLLERGRPVGPETTAETPLLERRGPAGLETTSEMPLLERRRPVGLETTAIMPLLERRGPAGLETTAIMPLLERHRPGRPETTSEMPLLERGGPAGLETTAIMPLLERGGPAGLETTAIMPLLERHRPAGLETTAITPLLERGRPDGQETTAIMPLWERGRPVGLETTSEMPLLKRRRPVGLETTSEMPLLERRGPAGLETTSEMPLLERGGPAGLETTAIMPLLDRGRPVGLETTAEMPLLERRGPAGLETTAIMPLLERHRPAGLETTAITPLLERGRPVALILETIKLGNQSA
>NZ_CP009287.1|WP_036707073.1|966012_966894_+|family-43-glycosylhydrolase
MTNPVIPGWYADPEARTYEGRHWIYATRSYTEYTQQMNLDAFSSVDLIHWNKHDSIIGMKDFPWIWRAVWAPTQIEHQGRHYLVFASNDIQKDGEAGGLEIAVADSPEGPYRGYLGKPLVDRFIYGAQPIDAHLFKDDDGAVYLYYGGWGHCNVARMNEEMTGFIPFSDGQAVRSITPPGYVEGPCMIKKDGLYYLMWSMGGWTNGTYRVAYGVSGSPLGPFANEGTILERQEPVAEGPGHHGYLYLPDEDEWLIVYHRRIIGDKEPGNRMLCIDRMEFEAGRIKPVIMTDSW
>NZ_CP009287.1|WP_155990552.1|965201_965972_+|ABC-transporter-permease-subunit
MFIIPFVWLIRSSLMNLSQIFTMPPEWIPAPFQWSNFQRALTALPFDTFFKNTLIIVVTVLAGTVITSTIGAFGFSRIQWKGRDTVFAILMTSMMLPAAVTMIPSFLGWQALGFYDTLYPLIIPAYFGGGIFNIFLLRQFYLTIPRDFDEAAFVDGASYWQIYTRIIFPLSRSAVIVVALFSFLASWNDFMGPLIYLKSDSLFTLALGLQMFQGSYTAQWDLLMAASATVVLPCVIVFLAGQRYFLEGITLTGLKG
>NZ_CP009287.1|WP_036707068.1|964257_965145_+|sugar-ABC-transporter-permease
MRKGMFYGLLFTAPAILGFAVFTLGPMIASLVLSLTDYNVFKEQTSFIGLDHYIRLFSGGDELFYQSLGATFYFVVLRVPAVIILSFAIALLLNLNVKGRAIFRTIIYLPSIVPAVASAMIWMWLLNPDLGLINSLLSRLHLPTSGWLYSEESVIPSVVLTTLWGIGSTVIIFLAGLSGIPRQYYEAIEVDGGGWLHRLRHVTIPMVTPTIFFNTIMTIIGSFQVFNEAYILTQGGPNNKSLFYVFYLWRTGFRDADMGYASALAWILFVIILFFTFIVFRTSKSWVYYEGGERS
>NZ_CP009287.1|WP_051424801.1|962840_964244_+|sugar-ABC-transporter-substrate-binding-protein
MLRQRKSIFTVMALVLMLAAVLSACSKSGSESSDASAPPGNSGSKEKITLRMTVWGSPEEVAPYKKAIQRFEDKFPNIKVELQHIAADYDTKLTTMVAGNDVPDVAMMESGTIAFPLAEQGKFYNLQEFLDKDSDISPDTLVPNIIYSLEPGNVIGIGPGPESFGLFYNEDIFKEAGIAPPPSNVADAWTWDEFVETAKKLTVDTNGKTAADPGFDPRKIKQYGVNASTWWGVYSNFIYSNGGDFISADGKSFGLNQPEAVEAIQKISDLMNVYHVSPSPVQSKNIPATNVALQTKKVAMTVDGQWASAGLAQSKFNFNVGVMPVLKEPVTTVVCAMFSIFKSTEHPQEAWELMKALVDPEASIDMITAGTWMPSLKDWYTDPALLAKWTENLEARPSGYKEAIVDVILTKGHQTPTGYVKNFNNIMDIVNPALDKVWLGQQSAQEAMDSIAAKVQAQIKGRRDIKE
>NZ_CP009287.1|WP_081759031.1|960953_962714_+|sensor-histidine-kinase
MTFRYRLLASYIFLIAIPLLVLGTVFYRTSLRIITEQAQRNVYEIVKKNNEVMDTKLRIVDQNSMSLFLDKDLFRIFNQLDPANEAGLFEADRQVTAILGKYFSQNQDIYAYQLWTSYFTFGQTLPQGDPTQSDIYHMARQAGGKLVWVPTYDFVSMFHQPYLQSGNLEFRYLFSATRVLDFTYLGNTRLEKMDARVERPVLAISFKSEVLKSLYADSISGSSRYMVLDPYDKVVASSEPGAVAHTYKEAWLDKLKLEGSGARRMTLDGEAVIVCFDRSEVTGWMSVVWIPEAGLLSSFVPVIRTSITVLAVVLGIAAFILAFFIAGKITKPIKRLLSAMRSVGEGDFQTRVEVVANDEFGILTKRFNRMNDRIHLLVTENYEIKLKEKEAEIQALTMQMHPHFLYNTLNVMNWTAIENDQQELSRMLVCLSNMLHYTSRKTWDAVHLSEEMNWMDNYFYIMSIRFEDKFMVEYDIDPQLYEYDVPRLLFQPFVENAILHGFNQTESGGIITIRGWMMQGTRFYEVADNGCGMSQETVHAIVYQKSSSVGIKNTIDRIQITYGTPYGVSIISAPGQGTRVVITLPV
>NZ_CP009287.1|WP_025708848.1|959355_960951_+|response-regulator
MRILIVDDEPRHLRGMVNLIHRLRPEDQVAVAKDGLAAMELAKSHRPEAILTDIRMPGMDGLEFLERLKQEGIKAKVVMVSAYNLFEYAQTAVRHGAYDYLLKPVDVQKIEDLLSRIDVQLNAERKQRREAEALERRLQLSSCAYRNRLILAWLNGSATVPELEELNRYEWLQESGVVVYSELECFREGAQQQDSDQLVSRLEQVWSQWGETLTVPLSGTLEDGRQAAVTLVGLRRLDGEKREEARTFAAGLASGWAHTGRLAHGIGPESPSLLADAPQAYLLARMAYSYNFYSCWSGLVFSDEISSSPMAPSPDWGRLYEALKGDDAALVLRVCSGIFTQLADGGHAAPLLLKEKASLMLLQIRSDNQDILDRKAGQMLADTATMLIRSCSSYQELMARLEKALREVQLALSLSRQDRGEIVITECLSWIQEHTKEEVTLERAADYFHFNPSYFSTLFKSRTGRTFSEHVTAVRMKRAKELLAEDKLRIYEISVECGFQDPKYFCRVFKKYHSMSPKTYKHVLSQRKREA
>NZ_CP009287.1|WP_025708850.1|958806_959175_+|helix-turn-helix-transcriptional-regulator
MKQYHLGIEATLEIIGGKWKALIICLLISGAKRTSELQRHIHGISQKVLIQQLRELEEDGLVRRHVYQQMPPKVEYSLTEYGVTANKIVDVMCTWGKENIKRRQCQGEDIVLLEDESMGDFE
>NZ_CP009287.1|WP_025708851.1|958048_958582_-|NAD(P)H-dependent-oxidoreductase
MNTLVILAHPSLEASRVNQRWREELRQYPKDITVHELYKAYPDGNIDVPREQNLLEAYPHVILQFPLYWYSYPPLLKKWFDEVWTYGWAYGSTGDKLNGKRIGLAMSIGDKQENYLPEGSVSFTVDEVIAPFKASARHVGAVALPYFAVFGASFQASDEEINHSAKEYIRYILKYQQ
>NZ_CP009287.1|WP_025708852.1|956781_957948_+|DUF4317-domain-containing-protein
MNKKEVAHIRKQFKLDHDLMNIYDILNVYIMKETNEIYHWERLPFGLVDREKQELYMGNFKKLLTGELDHKLFELKFQEEAEEPARVMLHQGLVTGDPEEWQDLMMMLVDKMLVDAKYEKDMVVTFVRGQYYRPTKARNEEAEESGKDEMFAHPFILCSVNSTEQQRKNLMFDYVEREFKYNIIVDPIIKLSSPEQGFFYPSVTDNYSDVNRILYCTGKSNYPDPQFIEQVLNAERSVTALEERSFFEEIVKELAGEQLDTTTLAQVYEEIQQVIEGGEGEEEPPKLDYKDVERVLAASGVENVTAEKVERAFETVIDDKYYEMKASSVIPKYTTKSIKIETKVATISVSPQDLRYVKQVNYQGKRCLMIEVDEEVVIEGFTLSTETL
>NZ_CP009287.1|WP_025703763.1|968371_969313_-|AraC-family-transcriptional-regulator
MPRKKKPVIEYRHYSLPIDFPVLLLSGERWKISDTRSEHLHFHNHLEIGICYSDSGIMEFQGEPVPFTAGDVTFIPRYLPHTTYSSPDTASLWSYLFFSPEELFQHSFKSVFSSFEPDLWAVTGKNCILNKEQYPKVYTLATSVVEELKQQKPYYQENAYGLLLSLYIELLRIHSTNEMLAEHEAEHSLRGDFVISPALEYITKNYMTSITIDSLAGLCHLSTTHFRRKFHEIMGAAPLEFLSRTRIEQACKQLKSTDDSILSISGQVGFHSISSFNRCFSRLMGESPKQWRKGAQAEAQPAKASILEFTGWV
>NZ_CP009287.1|WP_025703764.1|969507_970533_+|glycoside-hydrolase-family-88-protein
MLQLKVDREEILSVIDRVTRKTLAMDLTWEWPCGVAYYGVSRAYQTTGNKEYLDRLVQWADEYTELGLPDWTVNTCAMGHMLITLYEETGNQKYWDIVMSKVDYLRNDALRFGDNVLQHTVSVSNDFPEQAWADTLFMAAFFLLRAGSKLNDQDIIQDALNQYYWHIKYLQDPGSGFWFHGYNHVQQDHMSGLFWGRANAWGAYTMSQVKPLLKDWYLYPQCMDVECSLRDQLAALKLVQTENGLWRTVVNDEESYEEVSASCGIAAAMINNGNPLHTKYVQKALKGILQNISEDGRVLGVSGGTAVMKDREGYRNIPRDWIQGWGQGLALAFLSDMLKNE
>NZ_CP009287.1|WP_025703765.1|970725_972558_+|hypothetical-protein
MTEETTRLSKEIRNMIDIVYAGTNNALAVADQLTFFWSVFLLASDSPITLRYPYKMRTSYTWGELVDAEDDAYEVIQIKVLPELMKGHHYLPKRMASGGLKLTVTETQCYSLITIIDSIYKKLDGVPAFRTSLLALYDYMLDILLKGSIEGEDEWMSGESVDFIVSLVGSHLRVEGRGNSIHIHDAHCRSGQLLTASYRELPFIDPRKSLISGRSLSPIMTRISTFRFLLSGIHRFSVLNRDPLVYPSRSFSKAARKDIADRMDVNEIVYILPPRSITFDSRDLPDPGLIGQSDYAGVELSYLLYGLNSCAPGGWAFAMLPDELLKTEGDSILEKIETIAQIRSIVRLPKESSRMNIGKNSSLVVIMKEPLSVRQQLDDIRRYELSGYRKDDIKLFFTEYEQKSGQTSASNLTGFIEVSKPKQVKAELEEKLLERISKFEGQLSNLKDPLSIEQKLFSWQTDLYDLGSKQGIALAWQHLIHDNRINTVLSKEGEVVYELNQAGEKRDGYVSSELSGILSPQQWQLYIAISLSESPIAIHKARQRLSMEDRSVFTIQQAVETVQMLARMGMVECIYESVNRGAASPADNEWIDLWMKVPEGGRQWKFTASR
>NZ_CP009287.1|WP_025703766.1|972533_974093_+|AAA-family-ATPase
MEIHSLSLENYKHFQTFNGAFGQNDEELSKLSIKFLVGNNGSGKTSVLQAIGLIFTRAMNDESPGFVYELVYSIISGHKRVYVLLSNNSQRYSLTERLYIQMAESLEGIKNGPVVRERYSEQVNLHPRRIISFASGPNNSFEDVLVNSPLGAINSDIYDELKREGRNSGKLEYLQQLQRRLLYEPNCINLNGENAAFILAAIVLAEPVGVEMEGYRTKKNRLFQMVRNIRAELISFELDEVKCRQLEASPFNKMRYESLLVNFLQRGARRIKVVHSLDGTMPKAIRILTIPAGDILSSNPMEFLTMLVTAQRFGYLLNVNLFYKNEDSEHLLDHNSLSDGEFFWLSRMALIILSQQEYDENTLFLFDEPDVFLNENWTMQFISMLHDFAKMDLPGGESSEPRYNRQEYWIATHSTLILTDAFPDQTFKIELHSGVPGEFQAISLDIPTFGADRGEISALLFMDHERIGEFAKQVIDKALDEQKPYSNGRIQKMLDKVGPGYERFRLEEYLHARKQLRSD
>NZ_CP009287.1|WP_025703767.1|974117_975350_+|hypothetical-protein
MLFDLEKPYIIHSEMKLAGECMVALIKYCNTYGITDGQFDEKSFLKLRPHKMYKHCCLMKHPGAMRHRMKELFSTLPVTAIPFFISCLEEDLRFDFNHNQENYQFPGYLNTMFQGVLTVEETQKATDQLPKIFEKFYSDFFDHKENHTLKTNRERFKEEYIKLNTSKENICPACLGQMHMGKAQLDHYFPKSLFPALVIHPFNIVPICMECNSSVGKKQDRGKGNRVPAWPVDGEAINEPGCLNGVFLPYIRSGQQKFKSRIDGTPGNRVIKVEPLSTAASDEAERIRRHVDTFNLEKAWTNRIPFHFNMLMQRTLSEFARVYTDRVAIGGTVTKEEVGDFLWNKLVLNTEDTLYEVGYQFEFVSYVISMATTPECFHPFYKELLKRMEIRTRKAMPTVPHIYDSFSTTC
>NZ_CP009287.1|WP_036703223.1|975489_978843_+|HEAT-repeat-domain-containing-protein
MIFRKDPLDKKSLLKELDSLGYSDRIKKIAVLGRDHRGSTEYAGLLSSLLEDGAYEGRLALTGAEVTKDAKVVLSALRHPMASVRNTAAGLLAKVASDMDIERELPHLSHDCRRKLLRSVSFMNRQELAERLLPVVYAGWGAEEAAIVLSACNKDTVRQWLAEIGYAIKDWNKLAGRHPDAVAEYFRTTLHTPLREKGYVWWRFSSAFEILCRTKAEVVLECAADHGPMGILHPALKKQLSTLVRIDPDAVYKLLTRMESRSELISQGVPDGILKRRGDLSLDQWMELAKLLADRPMHIAKLLHNIAPSHRKAVFDAVYEEDKRQARIFPERLLYVLPHALRDKEASRMLGLREIYDDRERMIRITACRSIQHSREKLEQAAHVSSADERATALMQLIRSTVLSRQGMQETLVYLGRIKNDQDPVRSAVFKELSDSPASVFTDAHVQELTLLVDSVMDARDTSYGTKFSVQQLAFAILRHNALHPHGELFKFSLNTIRKLAKQNGQLALPSLEKNLPQGVEEILFDAIYTLAAQASRREDYNLVLSLANSFGKRGYGIAKLQNLLKEATRAKTDSIAIQAARHWLAPHPTRDERVRELLALDKSFITVYEVFLHLHRQRQEWLDPYISGAVIKGRFLSGKTIYLVPAADGFNRWLPRQQQSLSSLLGKIAFDDKRNFSERSRVIRIMGNMPDLGPDQLLELIHDKKITVVEAALHALSLIEEPEKALPVLLENLDGDRARVAMYSIPRCIRRVNPVLLASMLKELLYRDKLKVTVRKEAIRLLGAYRSGDSIPLLMNEFEKPNAHKDVIIAIGHAARQLLDDERGWSILSAMASSERDIAVSLLSQRPNDLPLEYRPRYLGLIIEIAGHPDANVGRFAFSSMMQWTNGNEEVIAAATAQAITDLEDSSRWKFAMNTLIETCRDGKINEAVISVCKKLASTAISEEWNAAATRDLPHRQRLMKLINELIALPKNSRVRLVPLYMGLIDCLAYDETLHQVVLKLYIAAIDWNNVEESVAYLNRMVNCITNQPQLLSDVYQQVVHQLKDSTGYWNPETLLEIVDLLGSEKGYEFQYIGLSVLEVAGSVLLWSPECADRLRLYRNHTSIAVRSLALNIWTH
>NZ_CP009287.1|WP_025703768.1|978823_979288_-|acetyltransferase
MNPIHRITDRNKEVSHQLLYIWETAVRATHLFLSEQNIAALSPLVIQGIRQIPHLLAYTDQDHYLGFIGVQDTKIEMLFVNPAVRGRGIGKQLVTYAIQTLNVLYVDVNEQNPQATGFYEHLGFQVFDRSERDEQGQPFPILHMKLSQVNESKC
>NZ_CP009287.1|WP_025703769.1|979361_980489_+|ROK-family-transcriptional-regulator
MATHRVNSMEVKKMNRNAIYRYLYHREATSIQEIAQALNLSLPTVTQNLKELQERELIVETGLFQSTGGRKAKSIACNSVARYAIGLDVTRNHIGIVIIDLSGAIVKHVRNHFPFANTEVYFQSVGKLVDDCVEECRIDSSRILGVGIALPAILSDDRQTVSYATVIDFKGGSVQRFAEFIRYPCILSNEANAAGFTELWGEKDIHNAVYLSLNNSVGGSIIVNNQIYAGQNHRGGEFGHMTIMPEGRTCYCGQKGCVDAYCSARILSDSTQGSISEFFRLLREGHEPQKSIWREYIGYLVITVNNLRMLYDCDVILGGYAGAYMEEYMDILQGLAARKNTFELDGTYLRICKYKLEATAVGAALELVTEFIDRI
>NZ_CP009287.1|WP_025703770.1|980744_981785_+|NAD(P)-dependent-alcohol-dehydrogenase
MKNRAFYMTDLKKLEMNEIGMPVAKEGEIIVKLEYVGICGSDVHYLEHGRIGDFVVEGDFILGHECAGAVVGLGPGVKKLKVGDRVALEPGVTCGQCEFCKSGKYNLCPEVKFLATPPYHGCLMDYIAFPENMAFKLPDSVSSEEGALVEPLAVGLHAAAQGGVKLGDRVVILGAGCIGLVTLLACKAYGATDIVVVDIIEKRLEAAKQLGASRVINAKQENVRDVISLLTDGQGMDKVIETAGSEHTVKQTPYLVKRGGTIVLVGLAAKDIIDFDFMQIMFKEADIQSVFRYRNLYPAAIGAIADGKIDVKGIVTHEFSFEDTQKAFDFVIDNKEEVVKAVIRMG
>NZ_CP009287.1|WP_025703771.1|981946_982480_-|CDP-alcohol-phosphatidyltransferase-family-protein
MKHIPNILSALRILCALLLLVVQPLSAIFFGLYLVCGASDVLDGYVARKTNSTSPLGASIDSVADVVYITALLAVFLPILQLSLWVICWIAAIALVRLSSLLVGYVKYRALSFLHTYANKATGLALFSFPLLYSIFGLTTASIVICGLASCSAIEELMINIKSQELLRDDAGWMFRK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_5

1102807-1103196

Orphan

Consensus_repeat	Method
GAAAGAACGGCAGAAATGCCGTTGTTGAGGCGC	CRT

7 spacers

DEDDh

The CRISPR arrays of NZ_CP009287_5

>merge|NZ_CP009287|5|1102807-1103196|CRT
GAAAGAACGGCAGAAATGCCGTTGTTGAGGTACCACGCGGCAGATGGCAGGGAAAGAACGGTAGAAATGCCGTTGTTGAGGCGCGGCGCGGCAGATGGCAGAGAAAGAACGGCAGAAATGCCGTTGTTGAGGCGTGGCGCGGTAGATAGCAGAGAAAGAACGGCAGAAATGCCGTTGTTGAGGCGCGGCGCGGTAGGTGGCAGGGAAAGAACGGCAGAAATACCGTTGTTGAGGCGCGGCGCGGTAGGTGGCAGGGAAAGAACGGCAGAAATGCCGTTGTTGAAGCTCCGTGCAGCAGATAGCAGAGAAAGAACGGCAGAAATGCCGTTGTTGAGGCGCGGCGCGGTAGGTGGCAGGGAAAGAACGGCAGAAATGCCGTTGTTGAGGCGC

>NZ_CP009287|5|1|1102807-1103196|CRT
GAAAGAACGGCAGAAATGCCGTTGTTGAGGTAC	CACGCGGCAGATGGCAGG
GAAAGAACGGTAGAAATGCCGTTGTTGAGGCGC	GGCGCGGCAGATGGCAGA
GAAAGAACGGCAGAAATGCCGTTGTTGAGGCGT	GGCGCGGTAGATAGCAGA
GAAAGAACGGCAGAAATGCCGTTGTTGAGGCGC	GGCGCGGTAGGTGGCAGG
GAAAGAACGGCAGAAATACCGTTGTTGAGGCGC	GGCGCGGTAGGTGGCAGG
GAAAGAACGGCAGAAATGCCGTTGTTGAAGCTC	CGTGCAGCAGATAGCAGA
GAAAGAACGGCAGAAATGCCGTTGTTGAGGCGC	GGCGCGGTAGGTGGCAGG
GAAAGAACGGCAGAAATGCCGTTGTTGAGGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703914.1\|1103963_1104491_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703913.1\|1104577_1105072_+\|CYTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|143626
NZ_CP009287.1\|WP_025707164.1\|1090409_1091177_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133381
NZ_CP009287.1\|WP_036705976.1\|1094804_1096589_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP009287.1\|WP_051424768.1\|1089921_1090284_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133384
NZ_CP009287.1\|WP_167337219.1\|1092527_1093388_-\|fused-MFS/spermidine-synthase	unknown	unknown	gnl\|CDD\|179854
NZ_CP009287.1\|WP_025707157.1\|1098498_1099842_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270452
NZ_CP009287.1\|WP_025703906.1\|1112948_1113824_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP009287.1\|WP_036703391.1\|1111922_1112909_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP009287.1\|WP_025703911.1\|1106740_1108024_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225306
NZ_CP009287.1\|WP_025707158.1\|1097483_1098377_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP009287.1\|WP_025703910.1\|1108155_1110096_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274912
NZ_CP009287.1\|WP_042266110.1\|1100084_1102643_+\|glycoside-hydrolase-family-2-protein	unknown	unknown	gnl\|CDD\|225789
NZ_CP009287.1\|WP_025707159.1\|1096647_1097481_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_025703908.1\|1110982_1111756_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181295
NZ_CP009287.1\|WP_025703912.1\|1105256_1106645_+\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_CP009287.1\|WP_025707161.1\|1093278_1094775_-\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP009287.1\|WP_025703909.1\|1110119_1110929_+\|acetoacetate-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|377649
NZ_CP009287.1\|WP_025707163.1\|1091430_1092183_-\|exonuclease-domain-containing-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|99836
NZ_CP009287.1\|WP_156124090.1\|1103383_1103614_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379153

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703913.1\|1104577_1105072_+\|CYTH-domain-containing-protein	gnl\|CDD\|143626	cd07761, CYTH-like_CthTTM-like, Clostridium thermocellum (Cth)TTM and similar proteins, a subgroup of the CYTH-like superfamily. CthTTM is a metal dependent tripolyphosphatase, nucleoside triphosphatase, and nucleoside tetraphosphatase. It hydrolyzes the beta-gamma phosphoanhydride linkage of triphosphate-containing substrates including tripolyphosphate, nucleoside triphosphates and nucleoside tetraphosphates. These substrates are hydrolyzed, releasing Pi. Mg++ or Mn++ are required for the enzyme's activity. CthTTM appears to have no adenylate cyclase activity. This subgroup consists chiefly of bacterial sequences. Members of the CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) superfamily have a unique active site located within an eight-stranded beta barrel.	2.19806e-33
NZ_CP009287.1\|WP_025703911.1\|1106740_1108024_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	6.70918e-15
NZ_CP009287.1\|WP_025707164.1\|1090409_1091177_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133381	cd01106, HTH_TipAL-Mta, Helix-Turn-Helix DNA binding domain of the transcription regulators TipAL, Mta, and SkgA. Helix-turn-helix (HTH) TipAL, Mta, and SkgA transcription regulators, and related proteins, N-terminal domain. TipAL regulates resistance to and activation by numerous cyclic thiopeptide antibiotics, such as thiostrepton. Mta is a global transcriptional regulator; the N-terminal DNA-binding domain of Mta interacts directly with the promoters of mta, bmr, blt, and ydfK, and induces transcription of these multidrug-efflux transport genes. SkgA has been shown to control stationary-phase expression of catalase-peroxidase in Caulobacter crescentus. These proteins are comprised of distinct domains that harbor an N-terminal active (DNA-binding) site and a regulatory (effector-binding) site. The conserved N-terminal domain of these transcription regulators contains winged HTH motifs that mediate DNA binding. These proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the spacer between the -35 and -10 promoter elements. Unique to this family, is a TipAL-like, lineage specific Bacilli subgroup, which has five conserved cysteines in the C-terminus of the protein.	2.08964e-42
NZ_CP009287.1\|WP_036705976.1\|1094804_1096589_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.02662e-59
NZ_CP009287.1\|WP_051424768.1\|1089921_1090284_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133384	cd01109, HTH_YyaN, Helix-Turn-Helix DNA binding domain of the MerR-like transcription regulators YyaN and YraB. Putative helix-turn-helix (HTH) MerR-like transcription regulators of Bacillus subtilis, YyaN and YraB, and related proteins; N-terminal domain. Based on sequence similarity, these proteins are predicted to function as transcription regulators that mediate responses to stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	1.87335e-40
NZ_CP009287.1\|WP_167337219.1\|1092527_1093388_-\|fused-MFS/spermidine-synthase	gnl\|CDD\|179854	PRK04457, PRK04457, polyamine aminopropyltransferase.	1.73672e-13
NZ_CP009287.1\|WP_025707157.1\|1098498_1099842_-\|extracellular-solute-binding-protein	gnl\|CDD\|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.86917e-44
NZ_CP009287.1\|WP_025703906.1\|1112948_1113824_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	3.56217e-18
NZ_CP009287.1\|WP_036703391.1\|1111922_1112909_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	8.07005e-64
NZ_CP009287.1\|WP_025707158.1\|1097483_1098377_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	2.85661e-76
NZ_CP009287.1\|WP_025703910.1\|1108155_1110096_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|274912	TIGR03997, NADH:flavin_oxidoreductase, mycofactocin system FadH/OYE family oxidoreductase 2. The yeast protein called old yellow enzyme and FadH from Escherichia coli (2,4-dienoyl CoA reductase) are enzymes with 4Fe-4S, FMN, and FAD prosthetic groups, and interact with NADPH as well as substrate. Members of this related protein family occur in the vicinity of the putative mycofactocin biosynthesis operon in a number of Actinobacteria such as Frankia sp. and Rhodococcus sp., in Pelotomaculum thermopropionicum SI (Firmicutes), and in Geobacter uraniireducens Rf4 (Deltaproteobacteria). The function of this oxidoreductase is unknown.	1.84161e-148
NZ_CP009287.1\|WP_042266110.1\|1100084_1102643_+\|glycoside-hydrolase-family-2-protein	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	3.78086e-110
NZ_CP009287.1\|WP_025707159.1\|1096647_1097481_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	3.17856e-55
NZ_CP009287.1\|WP_025703908.1\|1110982_1111756_+\|SDR-family-oxidoreductase	gnl\|CDD\|181295	PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional.	2.06947e-81
NZ_CP009287.1\|WP_025703912.1\|1105256_1106645_+\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP009287.1\|WP_025707161.1\|1093278_1094775_-\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	3.73032e-47
NZ_CP009287.1\|WP_025703909.1\|1110119_1110929_+\|acetoacetate-decarboxylase-family-protein	gnl\|CDD\|377649	pfam06314, ADC, Acetoacetate decarboxylase (ADC). This family consists of several acetoacetate decarboxylase (ADC) proteins (EC:4.1.1.4).	2.05917e-52
NZ_CP009287.1\|WP_025707163.1\|1091430_1092183_-\|exonuclease-domain-containing-protein	gnl\|CDD\|99836	cd06133, ERI-1_3'hExo_like, DEDDh 3'-5' exonuclease domain of Caenorhabditis elegans ERI-1, human 3' exonuclease, and similar proteins. This subfamily is composed of Caenorhabditis elegans ERI-1, human 3' exonuclease (3'hExo), Drosophila exonuclease snipper (snp), and similar proteins from eukaryotes and bacteria. These are DEDDh-type DnaQ-like 3'-5' exonucleases containing three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis. ERI-1 has been implicated in the degradation of small interfering RNAs (RNAi). 3'hExo participates in the degradation of histone mRNAs. Snp is a non-essential exonuclease that efficiently degrades structured RNA and DNA substrates as long as there is a minimum of 2 nucleotides in the 3' overhang to initiate degradation. Snp is not a functional homolog of either ERI-1 or 3'hExo.	2.72649e-50
NZ_CP009287.1\|WP_156124090.1\|1103383_1103614_+\|hypothetical-protein	gnl\|CDD\|379153	pfam13382, Adenine_deam_C, Adenine deaminase C-terminal domain. This family represents a C-terminal region of the adenine deaminase enzyme.	2.05083e-14

>NZ_CP009287.1|WP_042266110.1|1100084_1102643_+|glycoside-hydrolase-family-2-protein
MKLQLKLDNWQFRACGEEKWLPATVPGTVHTDLLRNELIPPPFYGKNEHELQWIDKKDWEYRTVLQLDEEWQQRAVTELVFKGLDTYADVYVNNVHILSADNMFRAWTIDVKELLRAGENEIRVRFRSVVNEDLPKLEQLGYALPAPNDQSALGGLGEQQISVFARKAPYHYGWDWGPRFLTSGIWREAVLEGRDQVAITDLYIRQNAVNQQEARLTALVEVDAPSAWNGLLRISCGGREWTKSASLQQGKQRLELEIVLDQPRLWWCNGLGKPELTAFRAELLKTGEAAAQAEVTTGLREIKLVREPDDRGASFYFELNGVRIFAKGSNHIPNDSFSTEVTEERYRHEVASAVASNMNMLRVWGGGIYEEETFYRLCDEYGLLVWQDFMFACSMYPGDEPFLENVREEAVYNVRRLRNHPCIALWCGNNEMDSAWSHYEDNMGWGWKEKFSQEIREKLWKDYEAVFHRILPEAVASCHPDVAYWASSPMRNLTYDMKQHATRMAGEGDVHYWGVWHGSEPFENYNVKVGRFMSEYGFQSFPELKSVLTYAEERDMELESEVMLAHQKNGRGNLLIKEYMDIYLPRPKDFKSFLYMSQILQAEAVRTAIESHRRNKPYCMGTLYWQMNDCWPVASWAGMDYYGRWKALQYTVRKSYKDLLLSIDSPDGENLRIHAVSDRQEGMAGELRVRLQDFSGAVLQEWIQPVTLAADSASVVFSEKLTALLQGREPRRVLLAATLQAGGQQLDHKHHYFVPGKEIAWTRPAVKVEEAPGSGGLSFIVTSDALARGVYLTAEEEGIFSDNFFDLLPGDSKTVEFFLSGSGEQDFTPSAPRGLEIYTMADYIDENLLSEA
>NZ_CP009287.1|WP_025707157.1|1098498_1099842_-|extracellular-solute-binding-protein
MKKKLFPLGFVIVTALSLSLTGCGSGNNNNNASTATNEPAASAEPSNSGGNSTATEPAAGGADISGKITFLTNRTDMIGKEYDEYVKRFNEKYPNIKVEFEASQTDYNQQAKVRMASGELPDIMFIPTVPNSDLPKYFAPLDDLGLNDQITFKDFKATDGKVYGITSGNSTTGIVYNKKAFADAGITELPKTWDEFLAACEKLKAKGIVPLASNFKDKWPLNNWVYDMPRVIEGKADFPNEKLNQEAPFTMDNGYGKAFSLLRELNEKGYLEKDINSTNWEQSKKDIAAGKFGMYFLGNWVINQVINAGTTSDNVGFFPLPYDNSGTITAPLSPDFFYAVSKDSKNVDAAKAFVKWMIEESGYEDFAGFLPPLKGKESKLPQIQEFQATGVQLQEASPDDAKVTEIGNKAQVDLPAMLQEFVLAKDPQSVFDKWNKAWAKSKKDLGY
>NZ_CP009287.1|WP_025707158.1|1097483_1098377_-|sugar-ABC-transporter-permease
MFGTLSYNKQKTIIIVSFLLIPLLLLATFTYYPAIKLIYYSFTDWDGYSPEKPWVGLANYREVFSNPDIFKVFTHNFAYFVMGLVQNIVAIYFAVVLNSKLRGRNGFRIMLFLPYIMNGVAVAFMFGYVFDTTNGSLNLFLNNIGLHQLAQTSWLGTEGLVNYSLASTGFWRFMGYNMVIYIASLQAIPRDIYEAAKIDGAGSFQTLWRVTLPNMKAVIQLNLFLTVTGALEVFDLPFVLTKGGPAGASQTYVQRVVDTAFAFNNYGLASAMSIILLFFVVIVLLVQQLVLNRGGDK
>NZ_CP009287.1|WP_025707159.1|1096647_1097481_-|carbohydrate-ABC-transporter-permease
MAHTKFRFVDFIKYFSLLIGVFVVLFPPYVVVVNAFKSTDEFNSSSSMALPKSFLNFDNFVAVFQRGGLLSGFGNVLVIIIITLTLNILFGTMVAYVLGRFSFKMKPVVFGAYLVATIIPSITTQVATFGIIKNMGLYNTLGAPIVLYIGADVIQIILYLQFIRNIPVDLDESAMVEGASLFKIYRSIIFPLLTPATATLVILKTISIYNDMYIPYLYMPKQSLGVVTTVLMRFQGVNSGEWNLICAAILLILLPTVVLYFFLQRYIFEGVTSGAVK
>NZ_CP009287.1|WP_036705976.1|1094804_1096589_-|sensor-histidine-kinase
MWLFLANLPMERKLIVVFVFLISMPITYVSYLSSRSMFNSVLVNATERAGQMTSNASDTIDRYVADLKRYTSLPLYNTDVQFYLTQKNTDWEKSTGMSMFLSYLKHMKNEILAVYMADQHDSVFYDTAVGINEIFPAERLSTWKKLSEAGGTAPVIQGRHSIRVNSSAQREVFSVLRTINSVSTLKKIGILVFDVDISLFKGILEPVNAVTQGNTLVVDDRGNLLYAGEGKQGETPEEQALTRQLLLDKVKLDQGHFQIKLDGVPYLAVYTVSKQTGWTTLVTIPLSSILSPMEKNRNTLILTTLVIIAFALFVATIISHALTKPLKSMVRLMKQVQHGNLDVWLHPKYNDEIGMLGSHFNRMIIRVKDLLHEVSLTEKRKQKADMRALQNQINPHFIYNTLESIRMLAESSEDPRVAKLTYLLGLQMRYGIVRSEEMVTIRHELDHVRNYLHLLQIRFPDKFMLNIEVPEAFLPLPVIKLVLQPIVENAVFHGLEPKEGPGTLRIIGWEEDGKAVFCIEDDGVGMDENTLRALNGSLRNGADGEMFGIGLRNVNERIRLHYGPSFGLSVSSEIGKGTRVTLRIEDLSGHLREE
>NZ_CP009287.1|WP_025707161.1|1093278_1094775_-|response-regulator
MLRIVIVDDEILIREGLARMISKESRRFLVTGTYADGKQLLDALPSLQIDVVITDIRMPHVDGLELIKQLKAGHPHISTLLMSGFVEFNYAREAIRSSAVDYLLKPINKEQLFEVLYRLDEERKKLREKEERHRSGLLLSLLHVEQPSSVLLSSLILPQPYFSVFVLKGSSRDTVCACSDSLRQEKELLMDSLEIRKGLYVWIWYSAEPLTAAELNSIGGHIRTASGGQRLHAGVSGSCSDPSKLRASYLEAKRACDAGIYNSQRIHYITAQELAAAELCLSDPFPALREPLIRDLQILNVPGVLEHIHSLFSVLESQRACPGHILRACREVEDTARKELQEFEAVYRVNGEPPLEEEIMSSMSFREIEQAFISAFSAALGSIRVHRLELSGTAIETVKRWVSAHYNQHPDLNMLAGMVYLTPSYLSKLFKQETGLTLTDYVIEIRIRKAKLLLKNAPDLKIHEVGAEVGYPDPAYFNKLFKKIVGVTPNEYKRISLA
>NZ_CP009287.1|WP_167337219.1|1092527_1093388_-|fused-MFS/spermidine-synthase
MRSGPRSATPIPPISTNCSKKLSASPRTNINAFHLLKEIDLLQPRSHLSDEQQGIQVYDTTELYGETGRFRVLQFSGDAIQGALDLDHPRRVVFEYPRAMIHLMEAGGPFFEDVFLIGHGIGTIAGYFTEKRFKIAEVSAEVVELSRQHFGYSQDNVIVGDGRSILEGEPEHCYDYILLDAFTADGTPRHLISSGFFALARSRLNSRGSIIMNLMGRSEKDRLMGAIHTTLSEAFPYVKAFALPSGGTADIRNILIMGSGKPIRYQARQMAGFAEITLGQGHVIRD
>NZ_CP009287.1|WP_025707163.1|1091430_1092183_-|exonuclease-domain-containing-protein
MDYIILDIEFNGRKFASEHPMEVIEIGAVRLDASLQYKDEFSALIRPIYFSTLNSFIKKKTGIPQEDIDVADRFPKVITAFRAWLDQSADGVLLLTWGGEDMKRIIQDVRMHKMDDAYWLSATYFDLLKGVLRARGLSNDISVEGAMALFGLEPSGSAHRALDDAKMTADIFRAVFPDLDFGRSQHYVDTFSNARERKTVKIAIKAMNAQKIVPTWELVAEHYFPGEDALADPRKLAELQAYFAAQLGKK
>NZ_CP009287.1|WP_025707164.1|1090409_1091177_-|MerR-family-transcriptional-regulator
MEYTVQKLGALAGVSTRTLRYYDEIGILRPARINSSGYRIYGQAEVDRLQQILFYRELGLSLEGIKELVTAPSFDGARALREHHEQLLQRKQQLEMLILNVEKTLAQTEGRITMSNEEKFAGFKQKLIDDNEQKYGQEIREKYGEEAVEKSNRKLKNMTEEQHAAIQQLEAEMFAMLEQAMEDGDPASVLAQKAADLHRQWLTFYWDTYTKEAHAGVAQMYVDDERFTAYYDKTRPGVAKFLRDAVHVYTEALKE
>NZ_CP009287.1|WP_051424768.1|1089921_1090284_+|MerR-family-transcriptional-regulator
MSRLTGLSAHTLRYYEKEGMLEGVVRNEQGYRVYSEADVSWVQFLVVLRELDIPIREMKRYSNLRSQGPSTVHERRLMLEAHQSRVEEQRRKLSGSLEKIARKIEYYKEMEEALVIKRNS
>NZ_CP009287.1|WP_156124090.1|1103383_1103614_+|hypothetical-protein
MIGGVTIKWGAIAAKYSHDNHNLLVVGHDLEDMAVAANTVIAEQGVSKAAVARNSAVQSAIECSSRPDPERDQASR
>NZ_CP009287.1|WP_025703914.1|1103963_1104491_+|hypothetical-protein
MAEMERAESSDYADNPGQRKSSGKRKKPTFMQIYLIVFLLGIAVFWVGSFIQMFSSFEERVSGRINLQDITSIEIIRSLPSTTDEVKVTVTDPAKIAGIMNAFAGVKLMSSNASHNFNRSYWISIIVGKSLRFGVRLDNQKYIYINDLARKDKYSSGSFKIINHYDIRSIDSLFD
>NZ_CP009287.1|WP_025703913.1|1104577_1105072_+|CYTH-domain-containing-protein
MDMEIERKFLLPEYPERLIQEGRVQVITRHSIDQTYLAIEDGQELRVRKITDLDSGEITYTHTFKDGKGISRKEIEYSISEGLYNQMIEAVKAVPLVKTRITGIWNGVTVEIDLYTQLELAVLEVEFDSLEAAESFVAPEWFGKDVSVEKKYSNKTVWKELQNR
>NZ_CP009287.1|WP_025703912.1|1105256_1106645_+|threonine-synthase
MEYISTRGNVKAKGFIDTVLMGLADDGGLMVPFQIPVISPEKLAEWRSLSFQELFLEIFSYYTNDEIPYDALKEMVYTSYSNFRAPEVTPLHKVNNSLYVLELFHGPTFAFKDVALQFMGELYSYIAKVRGEIIHILGATSGDTGAAAIQGVRGKEGIKICILHPHGKVSKVQELQMTTVDDSNVLNLSVEGNFDDCQKVIKELFADLDFKGKYHLRAINSINFVRILAQTVYYFYAYLQIEGSDEKKINISVPSGNFGNIFSGYLAKKMGLPVNKLIIATNENNILERFVNTGEYKPGSFTSTYSPSMDIQVASNFERYLYYLVGEDAEKLSAYMSKLQTEGKITIAGEALQQVQADFAALGVKNQQCLDTIGKYNEEYDYLLDPHTACGIAAYEQFNGAGETAITFATAHPAKFDESIALVGIKQEFPEQIAALFSLPQHQTVVEHDKDVIVRELQAFYE
>NZ_CP009287.1|WP_025703911.1|1106740_1108024_-|helix-turn-helix-domain-containing-protein
MDVSLDELRPDKIEMEHYTASLFTAYISGAGLSAIVQTAAALLRNPVIVFDSSFKIVAHSDPDEITDYLWSENIRKGYCSYDFIAAVNKLDSVRRGKQTDESYEVTCEETANTKLISKIKVGSKPIGNVLLLGCKHPLRPQDKELLAIAATILGEEMGKNSYYRNTRNMKVEDFICALLDQQFQDSHVIRDRMKSAGLRFGQHLLVLLFDLSRYEGSGHYDDFLRERLQQLFPGSPFTYYEGHIVMIHDGVLSKEHIPAHLREFLAQSGIMLGVSSKFSSLPQCRTHFLQSLSAIRIGGILCPGQHLTFYSDIHLYELLSADALSMEEPGYRDPELLKLQEYDAAHQSNLYHTFFVYLKNNRNMQLTAEELYIHRNTLRYKLDHISRLLETPFSDSEKMLGYYISYKIADYCQKARKRQNTSSLPMP
>NZ_CP009287.1|WP_025703910.1|1108155_1110096_+|FAD-dependent-oxidoreductase
MKYEKLMAAGKIGRLELKNRIVMPAMGTSLAAASGEASDEMIAFYEERAAGGCGLIITEITRVDNETGVGTPNQLNASDLLFVPRLEKLARAVHRHDSKIFLQLQHPGRQNHGRLIGGRQIVAPSAVMSSAIGEMPRELSAQEVEELVRKFVFAAHIAKTAGIDGVEIHGAHGYLVGQFLSPLTNLRTDKYGGSLEGRMLFLTEIVLGIKQACGAGFPVSVRIDGDEFVPGGITLDEALETAKHLESLGVDCINVSSGTYESSNTIIEPISYPQGWKKHLAAAMKQAVRIPVIACDVIRKPEFAESLLQEGNTDFVAVGRAQLADPEWGNKAAAGKESGIRTCISCLYCIQEVMECKVIKCAVNARAGRELEFAEPAKDGGSRAVAVIGGGPAGMEAARILAQREFKPVLFEARDVLGGSVELGSRPPLKEKLNWFIDNMQHQLEQLEVDIRLSTKPTLDQLKELEPYAVVVATGAQPVIPAIPGVNKAAVCTVVDVLGGNAVISSQRAVVIGSGMTGLETAEYLVDRGNRVTIVEMQPRIGPDAYLPNLIDIVTRLKKSGVELLASTKLVEVKDGSVVLENTSTGEVTEREADAVVLSIGVTPESSFTEELKQALPNVKVIGDAGKPGRIGQAIQTGFETAYMLR
>NZ_CP009287.1|WP_025703909.1|1110119_1110929_+|acetoacetate-decarboxylase-family-protein
MGSFVKRFTDIQKYGGKPTTFYDAEMLTLYWETKPEIIARLLPKPLKPASRPLVNAFVANYPATNFCPPYREAGLFVLADYNGQLGNYCLSMPITSDIGMAMGREVCGLPKKMADISLNNAEGFMGGTISRHGIDFVSMEARIEDRFNDSAAGEILDEYYGKDIPLYNIKYANAIDGSGFDLLPMLVTQRLVSDVKVYKAAEAAITFQDSPHDPWSELEVVNMLGAVYTVSTNVLEKGRVLEPLNPMEFLPYCYLRWDWWENKLQSGAL
>NZ_CP009287.1|WP_025703908.1|1110982_1111756_+|SDR-family-oxidoreductase
MTNLFDLTGKKAVIAGASSGIGVQFTEMLAGQGADVAILARRYDKLVAVAEEIGAKYPERRIIPIQCDVRQEDEIIEAVRKVMEAFGQIDILLNNAGVVDAVPIEALEEEAWDRVLDTDLKGVFLMSKHVIRHMKERKYGKIINTASMLGLTASASVPTHSYNAAKGGVIHLTRGVAATYAKHGITVNAIGPSLFRSEMTENTLFTEQALKMYNAVCPMGRPGNPGELNGAVLYFASDASSYTTGQTLFVDGGWTII
>NZ_CP009287.1|WP_036703391.1|1111922_1112909_+|Gfo/Idh/MocA-family-oxidoreductase
MTIRFGVIGTNWITDRFIQAGLENEEFILTAVYSRTVEKGRDFAAKYAGASIYTNLEEMVASREVDAVYIASPNSMHAEHALVCMNHGKHVICEKPAASNSAELRAMIEAARNNDVLFMEAMKSTFMPNFGVIKDNLYKLGQVRRYFAGYCQYSSRYDAYRQGTVLNAFNPAYSNGSLMDLGIYCLYPMVALFGKPESVRAVGLMLASGVDGEGSIVMRYPDMDAVVMHSKIADSYLPAEIQGENGTMVIDKINQPYQVKIHYRDGTVEELTLPQVFEPMYYEVEEFISLIKNGQRESHVNSHANSLAVAEVMEEARAQIGLRYASDL
>NZ_CP009287.1|WP_025703906.1|1112948_1113824_+|radical-SAM-protein
MKTFKKVYIEITSVCNLACSFCPPTERQKNFMKLDTFNTILDEIKPHSNHIYLHVKGEPLLHPKLGELLDAAHAKGFKVNITTNGTLIHKAGPKLLGKPALRQMNFSLHSFDGHAGSENREGYVSEIISFVREVTSQGVIVSFRLWNLTEDNRTNLEKKRNRETLALLEEAFNLDFNIEEKVVPGSGVKIAPRVYLNQDHEFRWPALSEPEDDGKGFCHALRSQAAVLVDGTVVPCCLDGEGVINLGNIHEKPFSEIVEGERANNLFYGFSRREAVEELCRKCGYRQRFGT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_6

1117111-1117185

Orphan

Consensus_repeat	Method
TAGTTGGAATTTCCCCACTTCAT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_6

>merge|NZ_CP009287|6|1117111-1117185|CRISPRCasFinder
TAGTTGGAATTTCCCCACTTCATGGTGCCCTAATTGAGCTGCGGAAGAGCGGTAGTTGGAATTTCTCCACTTCAT

>NZ_CP009287|6|5|1117111-1117185|CRISPRCasFinder
TAGTTGGAATTTCCCCACTTCAT	GGTGCCCTAATTGAGCTGCGGAAGAGCGG
TAGTTGGAATTTCTCCACTTCAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703913.1\|1104577_1105072_+\|CYTH-domain-containing-protein	unknown	unknown	gnl\|CDD\|143626
NZ_CP009287.1\|WP_025704748.1\|1117734_1118652_-\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP009287.1\|WP_025705410.1\|1126893_1127775_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP009287.1\|WP_025705409.1\|1127774_1128608_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_025703908.1\|1110982_1111756_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|181295
NZ_CP009287.1\|WP_025703912.1\|1105256_1106645_+\|threonine-synthase	unknown	unknown	gnl\|CDD\|236418
NZ_CP009287.1\|WP_025703905.1\|1113938_1114739_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703910.1\|1108155_1110096_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274912
NZ_CP009287.1\|WP_042266126.1\|1123299_1124931_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|381091
NZ_CP009287.1\|WP_025703911.1\|1106740_1108024_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225306
NZ_CP009287.1\|WP_042266122.1\|1114841_1116968_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|180751
NZ_CP009287.1\|WP_025705414.1\|1121471_1122641_+\|SGNH/GDSL-hydrolase-family-protein	unknown	unknown	gnl\|CDD\|238141
NZ_CP009287.1\|WP_042266128.1\|1130485_1131397_+\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176133
NZ_CP009287.1\|WP_025705407.1\|1130060_1130288_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_081758805.1\|1128667_1129975_+\|carbohydrate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224567
NZ_CP009287.1\|WP_025703909.1\|1110119_1110929_+\|acetoacetate-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|377649
NZ_CP009287.1\|WP_036703391.1\|1111922_1112909_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP009287.1\|WP_025703906.1\|1112948_1113824_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP009287.1\|WP_025705411.1\|1124927_1126760_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP009287.1\|WP_042266124.1\|1118885_1121207_+\|alpha-xylosidase	unknown	unknown	gnl\|CDD\|236731

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703913.1\|1104577_1105072_+\|CYTH-domain-containing-protein	gnl\|CDD\|143626	cd07761, CYTH-like_CthTTM-like, Clostridium thermocellum (Cth)TTM and similar proteins, a subgroup of the CYTH-like superfamily. CthTTM is a metal dependent tripolyphosphatase, nucleoside triphosphatase, and nucleoside tetraphosphatase. It hydrolyzes the beta-gamma phosphoanhydride linkage of triphosphate-containing substrates including tripolyphosphate, nucleoside triphosphates and nucleoside tetraphosphates. These substrates are hydrolyzed, releasing Pi. Mg++ or Mn++ are required for the enzyme's activity. CthTTM appears to have no adenylate cyclase activity. This subgroup consists chiefly of bacterial sequences. Members of the CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) superfamily have a unique active site located within an eight-stranded beta barrel.	2.19806e-33
NZ_CP009287.1\|WP_025704748.1\|1117734_1118652_-\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.48676e-26
NZ_CP009287.1\|WP_025705410.1\|1126893_1127775_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	9.84116e-73
NZ_CP009287.1\|WP_025705409.1\|1127774_1128608_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	7.01759e-71
NZ_CP009287.1\|WP_025703908.1\|1110982_1111756_+\|SDR-family-oxidoreductase	gnl\|CDD\|181295	PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional.	2.06947e-81
NZ_CP009287.1\|WP_025703912.1\|1105256_1106645_+\|threonine-synthase	gnl\|CDD\|236418	PRK09225, PRK09225, threonine synthase; Validated.	0
NZ_CP009287.1\|WP_025703906.1\|1112948_1113824_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	3.56217e-18
NZ_CP009287.1\|WP_025703910.1\|1108155_1110096_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|274912	TIGR03997, NADH:flavin_oxidoreductase, mycofactocin system FadH/OYE family oxidoreductase 2. The yeast protein called old yellow enzyme and FadH from Escherichia coli (2,4-dienoyl CoA reductase) are enzymes with 4Fe-4S, FMN, and FAD prosthetic groups, and interact with NADPH as well as substrate. Members of this related protein family occur in the vicinity of the putative mycofactocin biosynthesis operon in a number of Actinobacteria such as Frankia sp. and Rhodococcus sp., in Pelotomaculum thermopropionicum SI (Firmicutes), and in Geobacter uraniireducens Rf4 (Deltaproteobacteria). The function of this oxidoreductase is unknown.	1.84161e-148
NZ_CP009287.1\|WP_042266126.1\|1123299_1124931_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.08945e-40
NZ_CP009287.1\|WP_025703911.1\|1106740_1108024_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225306	COG2508, COG2508, Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism].	6.70918e-15
NZ_CP009287.1\|WP_042266122.1\|1114841_1116968_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|180751	PRK06922, PRK06922, class I SAM-dependent methyltransferase.	0
NZ_CP009287.1\|WP_025705414.1\|1121471_1122641_+\|SGNH/GDSL-hydrolase-family-protein	gnl\|CDD\|238141	cd00229, SGNH_hydrolase, SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.	5.71549e-14
NZ_CP009287.1\|WP_042266128.1\|1130485_1131397_+\|LysR-family-transcriptional-regulator	gnl\|CDD\|176133	cd08442, PBP2_YofA_SoxR_like, The C-terminal substrate binding domain of LysR-type transcriptional regulators, YofA and SoxR, contains the type 2 periplasmic binding fold. YofA is a LysR-like transcriptional regulator of cell growth in Bacillus subtillis. YofA controls cell viability and the formation of constrictions during cell division. YofaA positively regulates expression of the cell division gene ftsW, and thus is essential for cell viability during stationary-phase growth of Bacillus substilis. YofA shows significant homology to SoxR from Arthrobacter sp. TE1826. SoxR is a negative regulator for the sarcosine oxidase gene soxA. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine, which is involved in the metabolism of creatine and choline. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.38281e-61
NZ_CP009287.1\|WP_081758805.1\|1128667_1129975_+\|carbohydrate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224567	COG1653, UgpB, ABC-type sugar transport system, periplasmic component [Carbohydrate transport and metabolism].	4.46663e-44
NZ_CP009287.1\|WP_025703909.1\|1110119_1110929_+\|acetoacetate-decarboxylase-family-protein	gnl\|CDD\|377649	pfam06314, ADC, Acetoacetate decarboxylase (ADC). This family consists of several acetoacetate decarboxylase (ADC) proteins (EC:4.1.1.4).	2.05917e-52
NZ_CP009287.1\|WP_036703391.1\|1111922_1112909_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	8.07005e-64
NZ_CP009287.1\|WP_025705411.1\|1124927_1126760_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	3.9592e-41
NZ_CP009287.1\|WP_042266124.1\|1118885_1121207_+\|alpha-xylosidase	gnl\|CDD\|236731	PRK10658, PRK10658, putative alpha-glucosidase; Provisional.	0

>NZ_CP009287.1|WP_042266122.1|1114841_1116968_+|class-I-SAM-dependent-methyltransferase
MLKSLQAIEAYREDGKLSGGNYPWLDYIVQAEETIVNLERVDSLQELEYINPVLEYVERSLRLLDSLPLSYWIKELAEETLIWAETAKGGTLRQRRLWQAEGINIFVHNIGSAELYLRHTGGTGMGAYGGQGVPALEPGGTEAAKQEIVHRLIGTHGLIGQQIRGEVPPSVNRPLASLVEEGLLTADELERLLFALNHCIISAVSPELWQAVRTEVMGLIAVISSGDLHAGVPMKERLRRMRAGAITGGEDYDAEWSSLMEEGFNPDVLEPMQPITFWYVESALQTFSLEQFLKIMALTACGSKLSGLNHISYEAVMNSIYYDYKGIKKINVYKKRIIEKYLSGLAWEDILNRATPLGNPHLVHRLRREEHLPDTLFFNFEISPAAEKLIEFCMEAEKSALYERAVLMLFDLFELRRDAFDRFHNEDTYLSQMNETADYKAVILEYVTGRKVLDIGPGGGVLLDLIEERLPGVIPVGIDISSNVVEALRQRKQREGRLWEVLQGDALNLKDFVEPGTVDTVIFSSILHELYSYVPLNGTKFNHATVAAALVSSFEVLAEGGAIIIRDGIMTEPPDQRRRVRLLEADGMAALERYAKDFAGRAIQYERIDEQEVLMPVNDAMEFLYTYTWGEEAYIHEVQEQFGYFTPSQYKTFIQQTLGERAKLEVFRHYLQEGYTDALRDRVMVMDESGQEVPLPDSTCFIVIRKKG
>NZ_CP009287.1|WP_025703905.1|1113938_1114739_+|hypothetical-protein
MNVSRSIQRPPFPVADHDRQQRRGTEQNPGSNMRIPGKPESKLLDHLNKQKQSLMDRRSEYLGNALKRGESQEAIKAELASIDEQIQQLEQQIQKQAIDNQNKTKGLEEDNPKKKEEALQESWSPDNQTPEEQQLAYTTYNMNGVISAGNDLKQSSAVRIAQTTLQTEAKSWEKSNPAKSAGLLQKVTNLDQKLISIAKDIQEQMKENVQSAPSPVIRDESPANVQDKEDPAADTAEGSPSRPELEIYAEANKTTAPPGSRIDKVV
>NZ_CP009287.1|WP_025703906.1|1112948_1113824_+|radical-SAM-protein
MKTFKKVYIEITSVCNLACSFCPPTERQKNFMKLDTFNTILDEIKPHSNHIYLHVKGEPLLHPKLGELLDAAHAKGFKVNITTNGTLIHKAGPKLLGKPALRQMNFSLHSFDGHAGSENREGYVSEIISFVREVTSQGVIVSFRLWNLTEDNRTNLEKKRNRETLALLEEAFNLDFNIEEKVVPGSGVKIAPRVYLNQDHEFRWPALSEPEDDGKGFCHALRSQAAVLVDGTVVPCCLDGEGVINLGNIHEKPFSEIVEGERANNLFYGFSRREAVEELCRKCGYRQRFGT
>NZ_CP009287.1|WP_036703391.1|1111922_1112909_+|Gfo/Idh/MocA-family-oxidoreductase
MTIRFGVIGTNWITDRFIQAGLENEEFILTAVYSRTVEKGRDFAAKYAGASIYTNLEEMVASREVDAVYIASPNSMHAEHALVCMNHGKHVICEKPAASNSAELRAMIEAARNNDVLFMEAMKSTFMPNFGVIKDNLYKLGQVRRYFAGYCQYSSRYDAYRQGTVLNAFNPAYSNGSLMDLGIYCLYPMVALFGKPESVRAVGLMLASGVDGEGSIVMRYPDMDAVVMHSKIADSYLPAEIQGENGTMVIDKINQPYQVKIHYRDGTVEELTLPQVFEPMYYEVEEFISLIKNGQRESHVNSHANSLAVAEVMEEARAQIGLRYASDL
>NZ_CP009287.1|WP_025703908.1|1110982_1111756_+|SDR-family-oxidoreductase
MTNLFDLTGKKAVIAGASSGIGVQFTEMLAGQGADVAILARRYDKLVAVAEEIGAKYPERRIIPIQCDVRQEDEIIEAVRKVMEAFGQIDILLNNAGVVDAVPIEALEEEAWDRVLDTDLKGVFLMSKHVIRHMKERKYGKIINTASMLGLTASASVPTHSYNAAKGGVIHLTRGVAATYAKHGITVNAIGPSLFRSEMTENTLFTEQALKMYNAVCPMGRPGNPGELNGAVLYFASDASSYTTGQTLFVDGGWTII
>NZ_CP009287.1|WP_025703909.1|1110119_1110929_+|acetoacetate-decarboxylase-family-protein
MGSFVKRFTDIQKYGGKPTTFYDAEMLTLYWETKPEIIARLLPKPLKPASRPLVNAFVANYPATNFCPPYREAGLFVLADYNGQLGNYCLSMPITSDIGMAMGREVCGLPKKMADISLNNAEGFMGGTISRHGIDFVSMEARIEDRFNDSAAGEILDEYYGKDIPLYNIKYANAIDGSGFDLLPMLVTQRLVSDVKVYKAAEAAITFQDSPHDPWSELEVVNMLGAVYTVSTNVLEKGRVLEPLNPMEFLPYCYLRWDWWENKLQSGAL
>NZ_CP009287.1|WP_025703910.1|1108155_1110096_+|FAD-dependent-oxidoreductase
MKYEKLMAAGKIGRLELKNRIVMPAMGTSLAAASGEASDEMIAFYEERAAGGCGLIITEITRVDNETGVGTPNQLNASDLLFVPRLEKLARAVHRHDSKIFLQLQHPGRQNHGRLIGGRQIVAPSAVMSSAIGEMPRELSAQEVEELVRKFVFAAHIAKTAGIDGVEIHGAHGYLVGQFLSPLTNLRTDKYGGSLEGRMLFLTEIVLGIKQACGAGFPVSVRIDGDEFVPGGITLDEALETAKHLESLGVDCINVSSGTYESSNTIIEPISYPQGWKKHLAAAMKQAVRIPVIACDVIRKPEFAESLLQEGNTDFVAVGRAQLADPEWGNKAAAGKESGIRTCISCLYCIQEVMECKVIKCAVNARAGRELEFAEPAKDGGSRAVAVIGGGPAGMEAARILAQREFKPVLFEARDVLGGSVELGSRPPLKEKLNWFIDNMQHQLEQLEVDIRLSTKPTLDQLKELEPYAVVVATGAQPVIPAIPGVNKAAVCTVVDVLGGNAVISSQRAVVIGSGMTGLETAEYLVDRGNRVTIVEMQPRIGPDAYLPNLIDIVTRLKKSGVELLASTKLVEVKDGSVVLENTSTGEVTEREADAVVLSIGVTPESSFTEELKQALPNVKVIGDAGKPGRIGQAIQTGFETAYMLR
>NZ_CP009287.1|WP_025703911.1|1106740_1108024_-|helix-turn-helix-domain-containing-protein
MDVSLDELRPDKIEMEHYTASLFTAYISGAGLSAIVQTAAALLRNPVIVFDSSFKIVAHSDPDEITDYLWSENIRKGYCSYDFIAAVNKLDSVRRGKQTDESYEVTCEETANTKLISKIKVGSKPIGNVLLLGCKHPLRPQDKELLAIAATILGEEMGKNSYYRNTRNMKVEDFICALLDQQFQDSHVIRDRMKSAGLRFGQHLLVLLFDLSRYEGSGHYDDFLRERLQQLFPGSPFTYYEGHIVMIHDGVLSKEHIPAHLREFLAQSGIMLGVSSKFSSLPQCRTHFLQSLSAIRIGGILCPGQHLTFYSDIHLYELLSADALSMEEPGYRDPELLKLQEYDAAHQSNLYHTFFVYLKNNRNMQLTAEELYIHRNTLRYKLDHISRLLETPFSDSEKMLGYYISYKIADYCQKARKRQNTSSLPMP
>NZ_CP009287.1|WP_025703912.1|1105256_1106645_+|threonine-synthase
MEYISTRGNVKAKGFIDTVLMGLADDGGLMVPFQIPVISPEKLAEWRSLSFQELFLEIFSYYTNDEIPYDALKEMVYTSYSNFRAPEVTPLHKVNNSLYVLELFHGPTFAFKDVALQFMGELYSYIAKVRGEIIHILGATSGDTGAAAIQGVRGKEGIKICILHPHGKVSKVQELQMTTVDDSNVLNLSVEGNFDDCQKVIKELFADLDFKGKYHLRAINSINFVRILAQTVYYFYAYLQIEGSDEKKINISVPSGNFGNIFSGYLAKKMGLPVNKLIIATNENNILERFVNTGEYKPGSFTSTYSPSMDIQVASNFERYLYYLVGEDAEKLSAYMSKLQTEGKITIAGEALQQVQADFAALGVKNQQCLDTIGKYNEEYDYLLDPHTACGIAAYEQFNGAGETAITFATAHPAKFDESIALVGIKQEFPEQIAALFSLPQHQTVVEHDKDVIVRELQAFYE
>NZ_CP009287.1|WP_025703913.1|1104577_1105072_+|CYTH-domain-containing-protein
MDMEIERKFLLPEYPERLIQEGRVQVITRHSIDQTYLAIEDGQELRVRKITDLDSGEITYTHTFKDGKGISRKEIEYSISEGLYNQMIEAVKAVPLVKTRITGIWNGVTVEIDLYTQLELAVLEVEFDSLEAAESFVAPEWFGKDVSVEKKYSNKTVWKELQNR
>NZ_CP009287.1|WP_025704748.1|1117734_1118652_-|AraC-family-transcriptional-regulator
MDRTSQRLLKEDRVHGDVMFPLAAYWIELPAGTPVLDTHWHEEAEFFLLLEGEIMFQVDTDYFPLRAGEAVFIESGDIHAAYALKDSPCRFCALVFHPDLLASAQYDTIQQTVILPLLEKRQSFPRHISPAIPWQLELLRHLERMMEAYDNKLPGFESFMKGTLLIMLSQIAIEGRSVNHSQSESADTTKINRLKKIILYIQDNYQEPIRTRDLSELIPMSEGQFCRFFKAMTRKTPVDYINSYRIRQAADLLQQTERKISDIALEVGFDNVSYFIKVFRKAMKCSPSEFRKGQGQVSAQGQLYP
>NZ_CP009287.1|WP_042266124.1|1118885_1121207_+|alpha-xylosidase
MKFTDGLWLVRDGININGAVQNYVVEKTAEGLTAVTQTTPITGRAATLNSTLLTVKFHSPLPGVVGVKIIHNDGVVDHGPAFELTKGTGDHVQIEETGTQTVLISGGLRVVINKGTHWSVDFYRGDERITGSGFKSMAYITDQDGNTFMREELDLGVGEFVYGLGERFTAFVKNGQVVDIWNKDGGTSSEQAYKNIPFYVTSKGYGVFVNHPELVSYEIASEKVKKAQFSVAGQSLEYFVIEGPSIKEVITKYTSLTGKPALPPAWTFGLWLTTSFTTDYDEATVNSFVEGMAERDLPLHVFHFDCFWMREYQWTDFQWDPRVFPDPVGMLKRLKEKGLKICVWINSYIGQRSPLFEEGKKNGYLIKKANGDVYQTDLWQAGMGLVDFTNPAACEWYAGYLRDLVDMGVDSFKTDFGERIPTDVVYFDGSDPQKMHNYYTQLYNKVVFEVLEEKLGKNEAAVFARSATAGGQQFPVHWGGDCYADYESMAESLRGGLSLGLSGFGFWSHDIGGFENTAPAHVFKRWLAFGLLSSHSRLHGSTSYRVPWAYDDEAVDVTRFFTKLKCSLMPYLYDVAGQAHEQGWASMRAMVMEFPEDPTCEILDRQYMLGDSLLVAPIFQENGEVKYYLPAGRWTHLLRGETVQGGSWRKETHDFFSLPLFVRQNSLLATGSVDTRPDYDFADGVKFGLYSLEDGAATAATVRDIKGAPELTVKAERKGSTISVTAEGSGKPFTLAVKDLGAIASVDGAEQADEATVRVNAGAKSVSFTITLK
>NZ_CP009287.1|WP_025705414.1|1121471_1122641_+|SGNH/GDSL-hydrolase-family-protein
MHSQENQAGVFSQSEYTSATALSTAANYIMNRAEPFIHTYRTYIRLRGNGSLTLKFWHSNAVDSTWDMGLEAKASEPGGEWSIEAAYIADGGPEPDGTVLPGTQVPVTFWGEAAKQVAPGETFWSDEAVLMLPEGHYLAFTWTIRTAAPGKTFPYNVEGMLVSAYDASGNYAGQESNAAFSVSDKLLVLPSYIGYKKKVAKRLVLLGDSITQGVRTAKDEYSYWAARIADGLGTGYGLWNLGSGWGRAYDAATDGSWLDKAKQGDEVLIVLGVNDLDIGKRSAAGLLADLTHIVSLIREANPEAGIILGTVPPFNFEGEREAAWRSVNAQILAAPPAGVSRVFDIAAVLSMPAPLDHRVRPEYMSNTDDPHPNGTAGKAVADAFLEWYT
>NZ_CP009287.1|WP_042266126.1|1123299_1124931_-|helix-turn-helix-domain-containing-protein
MKALIVDDEARVRKAVRLLVDWDAHQIGEILEAGNGNEAIGLIRKEKPALVIMDMMMESGSGIELMAWVNEFAGNTKFIVVSGHNDFDFVRQTVRHGGIDYILKPIEPEMINNAVSKAVAAWRSEEEERSHRQKQSIRLNEIRPIYGEKLLSALIDDPINAEASLRRLWDDGVIPHTAKASRLILVQTDPGNNPLIKRFGGDSELLYYAIVNICNEFLQLQSNGIAFRYWGGPPEIAIILWDVQESVAELINRINQGIYMTLQFRMHFGISSVGALPGGLPAERAEAAEALLRRNLLRHEDYCHSPSSSDPADTGSEPPVIFADVQEEWRMAVISGNPEVLSAAAQHWTRELSRRGVVTPEMLNSWKADALLFRSRLVREALGAQADSALAELERADTLTPAPLPSGYSFSLFAWRDWSFALLQRLSQELTARAVKERNPMTEIVKYIEQNYPSDLSLQEVAGKFYVSREYISRKFKQEYGINFSDYIGSVRIDKAKLLLQNPNLKLSQISEMVGFHDVKYFSKVFKKQVGLSPKDYRAQIIP
>NZ_CP009287.1|WP_025705411.1|1124927_1126760_-|sensor-histidine-kinase
MKWNSIRTKLIVFLLLPTLVCIIATMFISYSYTTQSLRTRAVDENKNLLFQGYKNINSLVQEISRLSLIVYSDSDFYRLLEAGYDDLSSDIAIYNSLSYISTSLPNISQVYLYGVKDGKATLITDNTTPKRWLGNAPYEESHVTGSSPVKVQSTHLNDAYGLKLPLTQFIPEPVFTLHRRIERIPSSEPLGYLSIDVKLAALGDIIDQLYDQDQENIYLVDSTGTLVYGQDAGSLGKPLNAAWYSKQFADITGDQGYFEQDGSVFIYQKIESTGLNWTLVKQIPVSYLFREAKEAAVINILLLVLLLITIIVLTVLVSFRITAPIKQLTRYMNQVQTGNLEIDIRPAGKDEIGLVTERFRSMMDTINNLILREYRLELSNKTNELRALQSQINPHFLNNTLQIIGTLALELKVPQIYALLSALAKMMRYSMYNDEKIVTVQNELEHVKAYVELQKERFENKFTFRCDMEDSLLNALMPKMILQPIVENYFKHGFNLARTDGLIEIKAARLASGRMEIIIRNNGSSIPVLKLEALRQELQHPGRLDIDTLKETDSTDSKRDAPGARIGLPNVLARLRLVCGDSALLIVDNDKAGGVIVRLEIDIVVESETI
>NZ_CP009287.1|WP_025705410.1|1126893_1127775_+|sugar-ABC-transporter-permease
MRGSKLSQLGQQTFFVGPALLFFTLITIIPFLMGMYYSFTDWNGVSGNVSWVGADNFTAIFTNDPDFWSSFWFTVRFTVLGVVLTNIVGFFLAYFLTKPLKTRNMLRTIFFMPNVIGGLLLGFIWQFIFIKGFATMGDITGWSFFNLPWLGDATTGFWAIVMVFVWQSSGYLMVIYIASLSNVSKEVLEAAEIDGASRMQVLRSIIVPLIMPAVTIGLFLAISWSFKMFDLNLSLTKGGPFKSTESVAMNIYNEAFLNNRYGLGTAKALLFFLIVAIITVIQVRVTKSKEVEA
>NZ_CP009287.1|WP_025705409.1|1127774_1128608_+|carbohydrate-ABC-transporter-permease
MKAKSNGRWNIGIEVLMILLALLFLSPFYFLLANSVKSFGEILSNAASWPQEFMWSNYTNAWKLARFSEAFRNSLIVTIISVVLISLFSAMAAYRMVRANTRFNQILLLLFVAAMVVPFQTIMIPILKVVNILGVNNSFAGLIISNLGLSIPMAIFLFHGFIKSVPLEIEEAATVDGCNPISAFFRIVLPLLKPMLMTIIVLNALGIWNDYLLPSLILQAPGLRTIPLATFSFFGQYTKQWDMALPALTLGVAPIVIFYLFMQRYIVEGIAAGSVKG
>NZ_CP009287.1|WP_081758805.1|1128667_1129975_+|carbohydrate-ABC-transporter-substrate-binding-protein
MMKKRSALMLSSVMLMSVMLAACGGNSNNTASNNASNGSAGNTSGAVKTVKIFQFKTEIVEGLNELKVEFEKEHPNIKLDIQTVGGGADYAAALKTKFASGDAPDIFSNGGYAEMDLWGDKLEDLSDQPWVKDLIPLAAEPMTKDGKTYGMPMNLEGIGYVYNKDLFAKAGITETPKTITELEEAAKKLQAIDVTPFGNAYQEWWLLGNQGISVAFAQQDNVDEFIKGLNGGTASIVGNPVFKDWSNLLNLTVKYGQKNPLTTDANTHLAMFAKGETAMMQEGNWAQTLVDNITPNMNIGMFPMPINDDPAKNDKMTVGIPANLVVNKDSGSKEEAKTFLNWLVTSDMGKEYITKKWKFIPALKTIEATPEDIGALGSDVWKYVQDGKVYGLQSSKFPDGVTQEFASVIQELIAGKTDEAGWEKGMQAAWDKLKK
>NZ_CP009287.1|WP_025705407.1|1130060_1130288_-|hypothetical-protein
MENKDWSFKVPGDPDGREQVINTSEIKSVYDLLDLLHRDELQGPQQQTAGPKINPQAVLLPFVSRMTKKRRHPSA
>NZ_CP009287.1|WP_042266128.1|1130485_1131397_+|LysR-family-transcriptional-regulator
MDIGLLKVFQAAAEEGSISKAAQRLNYVQSNVTARIQQLEQELKTPLFYRHSRGITLTSAGQTLMEYTLKIINLLEEAAQAVLDSPVPKGSITVGSDTTAAVRLPAILSAYRGCYPDVEVQLQIGRNNDLIDAVLQYTVNGAFVDGPVEHPEIVQELVIHEKLGLIIPDTIDYQGLQSVHDKTLLILNAECIYRTRLEAWLGNEGCRLGKVMEFGTMEGLLGCVKAGIGYAVLPVSYFNRMNVTEGIRCYPFPERYAEVPTVFIRRRDLYMTSAFREFIEELKMRLPEAVCGADIPAENPAEP

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_7

1217717-1217803

Orphan

Consensus_repeat	Method
AAGTACCTCGGATTCCGCCCGTCTGAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_7

>merge|NZ_CP009287|7|1217717-1217803|CRISPRCasFinder
AAGTACCTCGGATTCCGCCCGTCTGACTAGAAACGGGCGAAACAAGGGTAAAAGCTCCGAAAGTACCTCAGATTCCGCCCGTCTGAC

>NZ_CP009287|7|6|1217717-1217803|CRISPRCasFinder
AAGTACCTCGGATTCCGCCCGTCTGAC	TAGAAACGGGCGAAACAAGGGTAAAAGCTCCGA
AAGTACCTCAGATTCCGCCCGTCTGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703678.1\|1213554_1216170_+\|polynucleotide-kinase-phosphatase	unknown	unknown	gnl\|CDD\|274963
NZ_CP009287.1\|WP_025703467.1\|1226643_1227084_+\|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224870
NZ_CP009287.1\|WP_025707344.1\|1204829_1205447_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP009287.1\|WP_025703091.1\|1222632_1223616_-\|ring-cleaving-dioxygenase	unknown	unknown	gnl\|CDD\|319935
NZ_CP009287.1\|WP_025703469.1\|1224751_1225684_+\|manganese-dependent-inorganic-pyrophosphatase	unknown	unknown	gnl\|CDD\|235458
NZ_CP009287.1\|WP_025704405.1\|1207876_1208779_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009287.1\|WP_051424672.1\|1221789_1222458_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP009287.1\|WP_025703466.1\|1227173_1227821_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380314
NZ_CP009287.1\|WP_156124051.1\|1208732_1210805_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_174469019.1\|1219939_1220914_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	unknown	unknown	gnl\|CDD\|133463
NZ_CP009287.1\|WP_042266152.1\|1205618_1207316_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP009287.1\|WP_036702742.1\|1223774_1224587_+\|AAC(3)-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|376807
NZ_CP009287.1\|WP_155990305.1\|1217167_1217686_+\|mismatch-specific-DNA-glycosylase	unknown	unknown	gnl\|CDD\|381679
NZ_CP009287.1\|WP_025703679.1\|1216523_1217081_+\|RNA-2'-phosphotransferase	unknown	unknown	gnl\|CDD\|179136
NZ_CP009287.1\|WP_025703094.1\|1220998_1221682_+\|noncanonical-pyrimidine-nucleotidase,-YjjG-family	unknown	unknown	gnl\|CDD\|162788
NZ_CP009287.1\|WP_025703677.1\|1212106_1213555_+\|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1	unknown	unknown	gnl\|CDD\|274962
NZ_CP009287.1\|WP_025703468.1\|1225980_1226553_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_155990287.1\|1219730_1219886_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704404.1\|1207493_1207874_+\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224639
NZ_CP009287.1\|WP_042266154.1\|1211265_1212069_+\|nucleotidyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|313370

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703678.1\|1213554_1216170_+\|polynucleotide-kinase-phosphatase	gnl\|CDD\|274963	TIGR04075, Ser/Thr_phosphatase_family_protein, polynucleotide kinase-phosphatase. Members of this protein family are the bacterial polynucleotide kinase-phosphatase (Pnkp) whose genes occur paired with genes for the 3' terminal RNA ribose 2'-O-methyltransferase Hen1. All members of the seed alignment belong to a cassette with the Hen1. The pair acts in bacterial RNA repair. This enzyme performs end-healing reactions on broken RNA, preparing from the RNA ligase to close the break. The working hypothesis is that the combination of Pnkp (RNA repair) and Hen1 (RNA modification) serves to first repair RNA damage from ribotoxins and then perform a modification that prevents the damage from recurring. [Transcription, RNA processing].	0
NZ_CP009287.1\|WP_025703467.1\|1226643_1227084_+\|Rrf2-family-transcriptional-regulator	gnl\|CDD\|224870	COG1959, COG1959, Predicted transcriptional regulator [Transcription].	1.08654e-19
NZ_CP009287.1\|WP_036702742.1\|1223774_1224587_+\|AAC(3)-family-N-acetyltransferase	gnl\|CDD\|376807	pfam02522, Antibiotic_NAT, Aminoglycoside 3-N-acetyltransferase. This family consists of bacterial aminoglycoside 3-N-acetyltransferases EC:2.3.1.81, these catalyze the reaction: Acetyl-Co + a 2-deoxystreptamine antibiotic <=> CoA + N3'-acetyl-2-deoxystreptamine antibiotic. The enzyme can use a range of antibiotics with 2-deoxystreptamine rings as acceptor for its acetyltransferase activity, this inactivates and confers resistance to gentamicin, kanamycin, tobramycin, neomycin and apramycin amongst others.	2.6007e-75
NZ_CP009287.1\|WP_025703091.1\|1222632_1223616_-\|ring-cleaving-dioxygenase	gnl\|CDD\|319935	cd08347, PcpA_C_like, C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.	7.52645e-68
NZ_CP009287.1\|WP_025703469.1\|1224751_1225684_+\|manganese-dependent-inorganic-pyrophosphatase	gnl\|CDD\|235458	PRK05427, PRK05427, putative manganese-dependent inorganic pyrophosphatase; Provisional.	4.2985e-174
NZ_CP009287.1\|WP_051424672.1\|1221789_1222458_+\|hypothetical-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	0.00184456
NZ_CP009287.1\|WP_025703466.1\|1227173_1227821_+\|nitroreductase-family-protein	gnl\|CDD\|380314	cd02137, MhqN-like, nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN. A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	2.84159e-64
NZ_CP009287.1\|WP_025704405.1\|1207876_1208779_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.80989e-73
NZ_CP009287.1\|WP_174469019.1\|1219939_1220914_-\|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase	gnl\|CDD\|133463	cd06853, GT_WecA_like, This subfamily contains Escherichia coli WecA, Bacillus subtilis TagO and related proteins. WecA is an UDP-N-acetylglucosamine (GlcNAc):undecaprenyl-phosphate (Und-P) GlcNAc-1-phosphate transferase that catalyzes the formation of a phosphodiester bond between a membrane-associated undecaprenyl-phosphate molecule and N-acetylglucosamine 1-phosphate, which is usually donated by a soluble UDP-N-acetylglucosamine precursor. WecA participates in the biosynthesis of O antigen LPS in many enteric bacteria and is also involved in the biosynthesis of enterobacterial common antigen. A conserved short sequence motif and a conserved arginine at a cytosolic loop of this integral membrane protein were shown to be critical in recognition of substrate UDP-N-acetylglucosamine.	2.10154e-77
NZ_CP009287.1\|WP_042266152.1\|1205618_1207316_+\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	4.48241e-67
NZ_CP009287.1\|WP_155990305.1\|1217167_1217686_+\|mismatch-specific-DNA-glycosylase	gnl\|CDD\|381679	cd10028, UDG-F2_TDG_MUG, Uracil DNA glycosylase family 2, includes thymine DNA glycosylase, mismatch-specific uracil DNA glycosylase and similar proteins. Uracil DNA glycosylase family 2 consists of thymine DNA glycosylase (TDG), which removes uracil and thymine from G:U and G:T mismatches in double-stranded DNA. It includes mismatch-specific uracil DNA glycosylase (MUG), the prokaryotic homolog of TDG. Escherichia coli MUG is highly specific to G:U mismatches but also repairs G:T mismatches at high enzyme concentration. Uracil-DNA glycosylases (UDGs) initiate repair of uracils in DNA. Uracil in DNA can arise as a result of misincorporation of dUMP residues by DNA polymerase or via deamination of cytosine. Uracil in DNA mispaired with guanine is one of the major pro-mutagenic events, causing G:C->A:T mutations. Thus, UDG is an essential enzyme for maintaining the integrity of genetic information. UDGs have been classified into various families on the basis of their substrate specificity, conserved motifs, and structural similarities. Although these families demonstrate different substrate specificities, often the function of one enzyme can be complemented by the other..	1.57383e-78
NZ_CP009287.1\|WP_025703679.1\|1216523_1217081_+\|RNA-2'-phosphotransferase	gnl\|CDD\|179136	PRK00819, PRK00819, RNA 2'-phosphotransferase; Reviewed.	1.33749e-61
NZ_CP009287.1\|WP_025703094.1\|1220998_1221682_+\|noncanonical-pyrimidine-nucleotidase,-YjjG-family	gnl\|CDD\|162788	TIGR02254, hydrolase_haloacid_dehalogenase-like_family, noncanonical pyrimidine nucleotidase, YjjG family. This HAD superfamily includes including YjjG from E. coli and YfnB from B. subtilis. YjjG has been shown to act as a house-cleaning enzyme, cleaving nucleotides with non-canonical nucleotide bases. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).	1.97515e-70
NZ_CP009287.1\|WP_025703677.1\|1212106_1213555_+\|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1	gnl\|CDD\|274962	TIGR04074, Methyltransferase_type_12, 3' terminal RNA ribose 2'-O-methyltransferase Hen1. Members of this protein family are bacterial Hen1, a 3' terminal RNA ribose 2'-O-methyltransferase that acts in bacterial RNA repair. All members of the seed alignment belong to a cassette with the RNA repair enzyme polynucleotide kinase-phosphatase (Pnkp). Chemically similar Hen1 in eukaryotes acts instead on small regulatory RNAs. [Transcription, RNA processing, Protein synthesis, tRNA and rRNA base modification].	6.01746e-111
NZ_CP009287.1\|WP_025707344.1\|1204829_1205447_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.20784e-12
NZ_CP009287.1\|WP_025704404.1\|1207493_1207874_+\|GntR-family-transcriptional-regulator	gnl\|CDD\|224639	COG1725, COG1725, Predicted transcriptional regulators [Transcription].	3.32213e-36
NZ_CP009287.1\|WP_042266154.1\|1211265_1212069_+\|nucleotidyltransferase-domain-containing-protein	gnl\|CDD\|313370	pfam10127, Nuc-transf, Predicted nucleotidyltransferase. Members of this family of bacterial proteins catalyze the transfer of nucleotide residues from nucleoside diphosphates or triphosphates into dimer or polymer forms.	3.46449e-102

>NZ_CP009287.1|WP_155990305.1|1217167_1217686_+|mismatch-specific-DNA-glycosylase
MDEVPDHLDHGLQIVFIGFNPSLRSGEVGHHYANPRNNFWRILERSGLTPRLYDASEDGELLRLGMGFTNIVARPTRGAEDITRQEYAEGRQILREKLARYRPAIACFVGKGVYTEFSRRPKADWGFQDGQPPIVDGVREFVAPSSSGLVRMPLLEIVAIYRRLYDYIQEGP
>NZ_CP009287.1|WP_025703679.1|1216523_1217081_+|RNA-2'-phosphotransferase
MLNHTAEVSLSKFMTKLLRHTPAEYGLLLDPEDGSCLLEDLQRVIHAAPKWAGITEEDIRQVVRNSEKQRFAIEEDRIKARYGHSHAKLAYEPGVPPEVLYHGTHQAALPSIFKEGLLPMGRQYVHLSEGLHFASLAGSRRGKLILLAVDTVKAVHLGVTFYYAGNEVWLSEPVPPACIALREEP
>NZ_CP009287.1|WP_025703678.1|1213554_1216170_+|polynucleotide-kinase-phosphatase
MTDRQEGQRVIPFPHGGIVVLVGPSNSGKTTLLRRLVQEGVLLQTEIISSDDYRTLVGDVEYIDWKGRPREEADILYNDYQLQSKLAFEAMNAVVSMRCRLGKLTVVDATHLQPEYRRKYIDLAAGHDLPCTAWILDLPEQTLLERDQSRDQPRGKQRVKQQFVQFKRSLCGLRDEGFDFTYMLKETESIQFIRKKNPLLAEIGAGVDVIGDIHGCYDEMLELLGQLGYAPDNAGLYRHPDGRTLVSVGDVMSRGPRSLDTMRFWKKHCDAGAARMIDSNHGWKIARYLSGRQVTLSHGDENIAAELAQVALEIGEGEADALREELKQFLLSAPSHLVLCREGVRRVVVAHAGIRDEYIGKQSKRIQDFCRYGDTDGTDATGAPVRKEWYVEHESGELIVWGHDPRPYPTVVKNTVNIDQGAVFGGSLTAYRYPEQKFVSIKAYQDYARDPDSPLIRWERGRFSPPNLRKLVEGYSVMTGTYGEISVRGESVKAAIDTVSHFTIPMEELVYIPPTMSPAPQVSADEAYLEHPREAIAYYRSQGVKTMVAEKKHMGSRAVLLLFRDEAAAVPYVGRPTLGTIYTRTGRAFFNKDTGPNVLSRLNSDLHQAGYWARHNTDLLLLDAEIIPWNLKARELIATQYAHVAEAAAMDRAQLLRKLREAEHAGRDVSGWVQEMEGKLKNARVFRDAFQQYCWDTSGLDGVRIAPFHTLAHSGQTFFDQSHLWHMEHGRELAGASPLFMETEYRTIASEADEAAVIRWWEELTEDGHEGIVIKPETFIVRSGKGLVQPALKVRGRKYLHIIYGIDYLQPDNLARLKLRKTGKKERHALMECALSVESVERFIRKEPLERMHECVLAALSLESDPVDPRL
>NZ_CP009287.1|WP_025703677.1|1212106_1213555_+|3'-terminal-RNA-ribose-2'-O-methyltransferase-Hen1
MHLIIRATGAGAGMLSRLLAKNPNNLYDRMEKEARVRIVFTASSEEEAEAVIYVTPDPVELVKGASSAHNDITQYINDREFVVSSLFCTYIRSALGTALNGKTKEAYLPWVERKLALELTFGPVASNLPDRTLEELFTALGYEVLVERGDAEYNFVLKSRSSVRYIRLKGMQTLQTALRQLFVLIPALDDYKHYYISDDEVDKIWRYGEGWLENHPQRGLILKRTLRFAGAIRQYDSLMKSSDHLEGTQAPDEASGGMAEEEALSPPVASAAAEADAAPKVRLNDLRYAAIADVVEQLSLRRSIVDFGSGEGKLSARLASVPGVREIKAVEPSATAQLRAIERFAKLEGKAGVPVPEPVTGSLFYYDESLRSKDVMILCEVIEHIDEYRLGRVMDTIFHEYAPGTLILTTPNKEYNEVYEMDQEEMRHGDHRFEWSREAFAAWCSRWTEAYNYSVRLSGIGEFAQDYGYPTQMAIFTKEDTL
>NZ_CP009287.1|WP_042266154.1|1211265_1212069_+|nucleotidyltransferase-domain-containing-protein
MSDIHTSIIRELRTIESEENVRILYACESGSRAWGFPSRDSDYDVRFLYLRCPEAYLSIFEQRDVIERPISDLLDINGWDLKKGLTLFRKSNPPLLEWLQSPVRYEENYTVAESIRSLSPLGFSPKSCIYHYLNMARGNYRTYLQGSEVKIKKYFYVLRPLLACAWIEKYQEVPPLDFTILVKDLIPEGSELRETVDRLLVRKMSGDKLNLEPRIEGINKYLEQQISHFEQIAAQFGSGNGVEDSVLDELFRSALLEVWGGESRWTP
>NZ_CP009287.1|WP_156124051.1|1208732_1210805_+|hypothetical-protein
MKWGMPGMTRSRYFFNSSVIRQNLRQHGWIGIIYTLGLLFSLPLQLFMRSYPGAEPQEIDTLFQVGGDLQMLFIISLPAAAGLFLFRYLQSRRASDLWHSLPLRREHLLTAHLASGLGLLLLPVWLTAAVTAMVTPMDGNMYIYQGTDIWNWCLAVSILTLFLFVFSIFVGICTGQTVIQGIIIYILLILPAALIEFVNHHLSMYLYGYPEWFGLSEDRLIWSPLLHLIVLGEEPFSTGELWTYSGLSLLFIVFSYILYRKRSVEKSGQAIAFTYFNPLFKAGVMLCAMLLAGTYFGAVKPHQAGWVLCSHLAGALLGYIAAEMVIRKTWQIMTRKVPLEFAVYGVLLGLLVYIPVSGLTGYEDRVPAAEHITGVYAGSNYRMYNDDSYNGFASSEVAKDSSGNRVPFAGGQQYIEAVRSLHQTLITVRPDYNIAPSEEYNRGGRMFTLAYRLDNGRMVVREYRIPAKGFEPEMKAVMENEDFKRAEYDVQALDAEIESFRLSYRERVVRITDPEDVREFKDILIREKLNMSYEDQNEGQLPIAYIQPIQKPADEEGGSGRVNASVTRNYEWLPSYKKLGNWMEEKGFAEKIRSTAKDVQSAEIIKDDYKGRISPGETYNLELHMSLARQQKLSVVTRDKKVIAGILEHQREYLGKNGMYAAKLEYTDGDTQYVSIDMEGLEPALKSLLP
>NZ_CP009287.1|WP_025704405.1|1207876_1208779_+|ABC-transporter-ATP-binding-protein
MIEIRGISKSFQGEKAVDSLSLTVHKGAIYGLLGSNGAGKTTLLKTLAGIYRPEEGTVKIGGQPVFESPQVKQNLIFMPDSPYFFPQASLKTMAAFYRSVYPGFSDKRFEELGTVFRLDMGRKLSRFSKGMQRQAAFWLALSCRPDVLIMDEPIDGLDPVMRRQIKNLLFQEVAERELTVLISSHNLREIEDLCDHVGIMHQGRMLVEKDLDDLKADTHKVQVAFRDERHASALAAKLQILHQERRGSVDLYIVKGDRERISKVIHVYEPYVFDLLPLTLEEIFIYEMGDAGYDAQPILL
>NZ_CP009287.1|WP_025704404.1|1207493_1207874_+|GntR-family-transcriptional-regulator
MFELDVRSRKPIYEQLNDKVKELIMHGILRADEQLPSVRTLSSQLTVNPNTIQKAYRELEREGYIYSLQGKGSFVAPLQQGQNESKRAGLREELLRLMAEAVYLGFTANEIGALYRQVLEQREKGE
>NZ_CP009287.1|WP_042266152.1|1205618_1207316_+|MFS-transporter
MSVRMRRALSFTAIVLGFFMALLDTTIINIALPEMTRHFGGSVSRISWVMNGYNLAFAVFILTASRLADQFGRKKVFIFGVALFTLTSLLAGFSTSLGMLILLRVIQGLAGAIIVPVTIPLTTTTFPKEMHGLIIGIWGAVSGVAAASGPALGGILTQNLSWEWIFFVNVPLGVLSIVLTAVFIQESRDDTAGRSIDYGGTLGITGAMFFITYALIKVQDYGWSSGVTLALLGAGVLFLLLFIFTQWKGREPMLPLSLIRIRTFNNASLTLLIVGAALMNLSLLTSFFLTRMMGMTELKAGLVLSMVAVGSIVSSAVSGPLSAKYGSHLFAAAGIVITGGAMYSMSGLHAESAVAEVVVRLLVAGVGIGLTMAPVMSSAVRNVPEDKVGISSGVTNMAKSLGSVIGVAIIVTVLQHNMDSELGKAGTHLSEAVQADVKLQPLVKNVLAEAVASISKEGAAPMGGNSGKADPAAAVVHAVELAAAKLPPAEQKAFAADSANQFREAKLLLSQAGNGMQQAAVEGFRRTFVFAGLLMIPGILFALLSDKRRKPEEPAAVAEPAVLER
>NZ_CP009287.1|WP_025707344.1|1204829_1205447_-|TetR/AcrR-family-transcriptional-regulator
MSDMEDKIRTPRQERSIRTKEAIVQAAMKQFSDKGFHQTNTKQIAAAAGVSTGSFYSYFVDKRAVFIEVLKNYGADLLARIDASMSEINFLTIDRSELIMHLVDTLLISHEAFIGYHRELTIMYHSDEEIKQLMDAQYEAGRIRTLEYLQMGQDELKTEDMEAASVIVFETVSAIVDVISFSQQRIATERLKSELVHMIVSYLYK
>NZ_CP009287.1|WP_155990287.1|1219730_1219886_-|hypothetical-protein
MPDLHRLGLLLGQAGFDIADNNTLPGSTAGNVPFRGTDRADYRLAAKTPLI
>NZ_CP009287.1|WP_174469019.1|1219939_1220914_-|undecaprenyl/decaprenyl-phosphate-alpha-N-acetylglucosaminyl-1-phosphate-transferase
MAVIVIFYVLAFLVSFCIVYLLIPPLGRLAFRLDFVDKPRQDVERKIHREPIPLTASYAIFIGFFITYLLFTRDLSLGTLALFIGGVLLLTIGTVDDWYKTKGKDFPALPKFIVQIAAAILVFLSGNAFTGFFNPFSGDYISLPVILQFVLTILWIFGVTTVINFSDGMDGLAGGLTAISAVTLFVVALAKGQSASAMMAITLVGVTIAYLRYNKAPAKIFMGDAGATFLGYILAVIALDGAFKQATVLSLFIPILALGVPIFDNLFVVIKRFVQGKSIYQADATQVHYRLLKAGLNQKQVVAVLYLASVCLSLSSIILLLIQI
>NZ_CP009287.1|WP_025703094.1|1220998_1221682_+|noncanonical-pyrimidine-nucleotidase,-YjjG-family
MKYEVILFDADDTLFDYGMAESRALYNAFAHFGLPTGAGDYAASYKEINAALWRDLEQGRTTSAVLRVERFNRLFAAHKLQLSPEAFSEAYLKFLGEGTYLIQGAVELCQELAGCRLAIITNGIKDVQLSRIQGSPLSGTFEQIIISEETGYQKPERGIFDYAFAKLGSSDRSKVLIVGDSLTSDIQGGMNYGIDTCWFNPLGKEGVPGIHPTYEIRELSGLLEIIR
>NZ_CP009287.1|WP_051424672.1|1221789_1222458_+|hypothetical-protein
MKKKWLIAAVAAGMTITGSAGVYAGAKLEQIKAYLNHSIGVVVDGTPYWLKDGNGKTLTPITYEGITYLPVRSIAGALKVPITYDAANYKVRIGTGAETGGTPGTGAGTTPPLVESTERPANLPKDFPIPADAIIATTLDTDADGVKKAAFTYSTQEDLATMGFVYSEYVRIKRLENASQTVSASTVRISGKLGGTSPLSITGKASTARPGFNIFTVTFSES
>NZ_CP009287.1|WP_025703091.1|1222632_1223616_-|ring-cleaving-dioxygenase
MSLTLKGLHHVSALTARAPENFKFYTEVLGLRLIKKTVNQDDVSVYHLFYGDEAGNPGTEVTFFEIPNAGRNRDGNNSISALSLRVPDDKALEYWTQRLAEFQVEHEGIQDRGGRKTLAFRDHEGQRLILVSDEHNQGVAGGKPWDKSPVPAAYGILGLGPVHLTVGAAESSAKVLTDLLGFRRKGTYPSPVAGQPDVSVFETGEGGSGAEIHLEERLDLPQERLGRGGVHHVAFRVDNEEELKQWIGRISSYPLQNSGFVDRFYFRSLYFREPSGILFELATDGPGFATDEDIEHLGESLALPPFLEDKRTQIEAHLKPLDTRQQG
>NZ_CP009287.1|WP_036702742.1|1223774_1224587_+|AAC(3)-family-N-acetyltransferase
MIHTQASLMEQLKGMGIDPRGTALVHSSLKSIGEVQGGADTVLDALSEYMRQGLLVLPTHTWSYIDADNPQFSVQQSPSCVGILPELFRKRPGVIRSWHPTHSAAALGKDAAEFTSGDERWDTPCARGSVYGKLLDRKADILLLGVDLRRNTFIHGIEEWLDIPGRMTDSREQLYTETPGGEVISVPSRRHCGLSWSEHFWKVEQVLETGGALRRASFGDAPVMICGTVQTTDILSRMLIADPELFSDNEPLDGGAVPEPLPKTKRGLPE
>NZ_CP009287.1|WP_025703469.1|1224751_1225684_+|manganese-dependent-inorganic-pyrophosphatase
MEKTLIFGHKNPDTDTICSAIAYAALKKELGWDVEAVRLGEISGETQYALDHFGVKAPRLAENVASEAKQVILVDHNERQQSANDIDQVRVVEVIDHHRIANFETAHPLYYRAEPVGCTATILNKLYKENGVAIPKDIAGLMLSAIISDSLLFKSPTCTEQDVAAARELAGIAGVDADSYGLAMLKAGADLSDKTIAQLISLDAKEFKMGEYKVEIAQVNAVDVNDVLAKQAELETALTAIIDDKGLDLFLFVVTDILNNDSVGLALGRVAGAVEQAYNVKLDDNKAVLKGVVSRKSQIVPVLTETIAKL
>NZ_CP009287.1|WP_025703468.1|1225980_1226553_+|hypothetical-protein
MRTIKKLIFATMCLMIISGGSLLYAATGKSDIAVYLNNVLLKNSGLLSEGVPYLPVEQLPESLHAVLSWDESAQEVRIYKPNVNMVLLDDQGKIFGKVRSAASNTFSVLVQVDHLKTDISDLKITITDPLNKTDIVDNQPIKEKKDSFWFKSANYSYTFNEKGNYMIQVYIKDSSSKSWFIVSEMQISTI
>NZ_CP009287.1|WP_025703467.1|1226643_1227084_+|Rrf2-family-transcriptional-regulator
MTRTRNSGAPPYKSFVLVLQALIIMARKEGNTCSSCEIAGYLSSEPTVLRKALAKLTKEQILVTREGRDGGYMLNRSPEELTLAEIYCAMEVDGLQSNAVIETMYGNTFGAQMKSACGDILEEMNQSALGILQKYTLGDLVRRTGC
>NZ_CP009287.1|WP_025703466.1|1227173_1227821_+|nitroreductase-family-protein
MASELKVEQEFSKVIRERRSVRKYDSSWKIPDEEIKEILAEAILAPSSSNLQPWRFIVITDQEIKAKLLPIAHNQAQTTESSAMIAVLGDTEAYSNAETIYGQASAMGLMPEDVAATMAKRSREGYSSLPKEKLEDIALVDGGLVSMQLMLAAKARGYDTVPMGGYDAAALKELFQISDRYIPVMLIALGKAAVEGRATNRLPLEDVVHWNGFQA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_8

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_8

1241128-1241515

Orphan

Consensus_repeat	Method
TNACAGNGAAATGAGAGGTACTNATACCTCA	CRT

7 spacers

The CRISPR arrays of NZ_CP009287_8

>merge|NZ_CP009287|8|1241128-1241515|CRT
AATTACTGCGAAATGAGGTACTTATACCTCACATTTGCTCCCTCGGGCAGTTTACAGCGAAATGAGAGGTACTAATACCTCACATTTGCTCCCTCGGGCAGTTTACAGCGAAATAAGAGGTACTTATACCTCACATTTGCTCCAATGGGCTGTTAACAGTGAAATGAGAGGTACTAATACCTCACATTTGCCTCATTGGGCAGCAGACAGCGAAATGAGAGGTACTAATACCTCATATTTGCTCCGATGAGCTGTTTACAGTGAAATGAGAGGTACTAATACCTCACATTTGCTCCCTCGGGTAGCTTACAGTGAAATGAGAGGTACTTATACCTCATATTTGCTCCGATGAGCTGTTTACAGTGAAATGAGAGGTACTAATACCTCA

>NZ_CP009287|8|2|1241128-1241515|CRT
AATTACTGCGAAATGAGGTACTTATACCTCA	CATTTGCTCCCTCGGGCAGT
TTACAGCGAAATGAGAGGTACTAATACCTCA	CATTTGCTCCCTCGGGCAGT
TTACAGCGAAATAAGAGGTACTTATACCTCA	CATTTGCTCCAATGGGCTGT
TAACAGTGAAATGAGAGGTACTAATACCTCA	CATTTGCCTCATTGGGCAGC
AGACAGCGAAATGAGAGGTACTAATACCTCA	TATTTGCTCCGATGAGCTGT
TTACAGTGAAATGAGAGGTACTAATACCTCA	CATTTGCTCCCTCGGGTAGC
TTACAGTGAAATGAGAGGTACTTATACCTCA	TATTTGCTCCGATGAGCTGT
TTACAGTGAAATGAGAGGTACTAATACCTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_174469046.1\|1229474_1230227_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223725
NZ_CP009287.1\|WP_025704301.1\|1247946_1248687_+\|capsular-biosynthesis-protein	unknown	unknown	gnl\|CDD\|226453
NZ_CP009287.1\|WP_025704298.1\|1251150_1252086_+\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP009287.1\|WP_025703463.1\|1230392_1231631_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340949
NZ_CP009287.1\|WP_042266158.1\|1239790_1240867_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP009287.1\|WP_051424676.1\|1233205_1233811_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704303.1\|1243771_1244626_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|197666
NZ_CP009287.1\|WP_025703457.1\|1239407_1239722_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703462.1\|1231669_1232995_-\|voltage-gated-chloride-channel-family-protein	unknown	unknown	gnl\|CDD\|239654
NZ_CP009287.1\|WP_025704297.1\|1252094_1253441_+\|O-antigen-ligase-family-protein	unknown	unknown	gnl\|CDD\|377422
NZ_CP009287.1\|WP_042266161.1\|1250432_1251125_+\|sugar-transferase	unknown	unknown	gnl\|CDD\|376775
NZ_CP009287.1\|WP_025704304.1\|1241755_1243687_-\|family-20-glycosylhydrolase	unknown	unknown	gnl\|CDD\|119335
NZ_CP009287.1\|WP_025704300.1\|1248670_1249312_+\|CpsD/CapB-family-tyrosine-protein-kinase	unknown	unknown	gnl\|CDD\|349772
NZ_CP009287.1\|WP_036702985.1\|1238020_1238263_-\|NHLP-leader-peptide-family-natural-product-precursor	unknown	unknown	gnl\|CDD\|274786
NZ_CP009287.1\|WP_025704299.1\|1249453_1250341_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl\|CDD\|224131
NZ_CP009287.1\|WP_020426703.1\|1246927_1247563_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP009287.1\|WP_025703460.1\|1236082_1237999_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP009287.1\|WP_025704302.1\|1245257_1246904_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP009287.1\|WP_025703458.1\|1238343_1239276_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_081758556.1\|1234073_1235975_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|223715

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_174469046.1\|1229474_1230227_-\|peptidylprolyl-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	3.07867e-65
NZ_CP009287.1\|WP_025704300.1\|1248670_1249312_+\|CpsD/CapB-family-tyrosine-protein-kinase	gnl\|CDD\|349772	cd05387, BY-kinase, bacterial tyrosine-kinase. Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.	2.05802e-59
NZ_CP009287.1\|WP_025703463.1\|1230392_1231631_+\|MFS-transporter	gnl\|CDD\|340949	cd17391, MFS_MdtG_MDR_like, Multidrug resistance protein MdtG and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli multidrug resistance protein MdtG, Streptococcus pneumoniae multidrug resistance efflux pump PmrA, and similar multidrug resistance (MDR) transporters from bacteria. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtG confers resistance to fosfomycin and deoxycholate. PmrA serves as an efflux pump for various substrates and is associated with fluoroquinolone resistance. MdtG-like MDR transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.69605e-90
NZ_CP009287.1\|WP_042266158.1\|1239790_1240867_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	6.62321e-16
NZ_CP009287.1\|WP_025704301.1\|1247946_1248687_+\|capsular-biosynthesis-protein	gnl\|CDD\|226453	COG3944, COG3944, Capsular polysaccharide biosynthesis protein [Cell envelope biogenesis, outer membrane].	1.3633e-43
NZ_CP009287.1\|WP_025704298.1\|1251150_1252086_+\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	8.12777e-30
NZ_CP009287.1\|WP_025704303.1\|1243771_1244626_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.9608e-19
NZ_CP009287.1\|WP_025703462.1\|1231669_1232995_-\|voltage-gated-chloride-channel-family-protein	gnl\|CDD\|239654	cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins. This ClC family presents in bacteria, where it facilitates acid resistance in acidic soil. Mutation of this gene (sycA) in Rhizobium tropici CIAT899 causes serious deficiencies in nodule development, nodulation competitiveness, and N2 fixation on Phaseolus vulgaris plants, due to its reduced ability for acid resistance. This family is part of the ClC chloride channel superfamiy. These proteins catalyse the selective flow of Cl- ions across cell membranes and Cl-/H+ exchange transport. These proteins share two characteristics that are apparently inherent to the entire ClC chloride channel superfamily: a unique double-barreled architecture and voltage-dependent gating mechanism. The gating is conferred by the permeating anion itself, acting as the gating charge.	0
NZ_CP009287.1\|WP_025704297.1\|1252094_1253441_+\|O-antigen-ligase-family-protein	gnl\|CDD\|377422	pfam04932, Wzy_C, O-Antigen ligase. This group of bacterial proteins is involved in the synthesis of O-antigen, a lipopolysaccharide found in the outer membrane in gram-negative bacteria. This family includes O-antigen ligases such as E. coli RfaL.	8.30963e-10
NZ_CP009287.1\|WP_042266161.1\|1250432_1251125_+\|sugar-transferase	gnl\|CDD\|376775	pfam02397, Bac_transf, Bacterial sugar transferase. This Pfam family represents a conserved region from a number of different bacterial sugar transferases, involved in diverse biosynthesis pathways.	7.09507e-97
NZ_CP009287.1\|WP_025704304.1\|1241755_1243687_-\|family-20-glycosylhydrolase	gnl\|CDD\|119335	cd06565, GH20_GcnA-like, Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.	4.23383e-93
NZ_CP009287.1\|WP_036702985.1\|1238020_1238263_-\|NHLP-leader-peptide-family-natural-product-precursor	gnl\|CDD\|274786	TIGR03793, TOMM_pelo, NHLP leader peptide domain. This model represents a domain that is conserved among a large number of putative ribosomal natural products (RNP) precursor, including the thiazole/oxazole-modified microcins (TOMMs). As a leader peptide domain, likely to be removed from the mature product, this domain is unusual in several ways. First, it is longer than most previously described RNP leader peptides. Second, most of the domain is homologous to nitrile hydratase alpha subunits. Finally, it appears that this domain correlates with a specific family of cleavage/export proteins while members undergo modifications by different classes of peptide maturase, including cyclodehydratases, lantibiotic synthases, radical SAM peptide maturases. This family is expanded especially in Pelotomaculum thermopropionicum SI. [Cellular processes, Biosynthesis of natural products].	1.14827e-17
NZ_CP009287.1\|WP_081758556.1\|1234073_1235975_+\|sensor-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	6.39943e-44
NZ_CP009287.1\|WP_025704299.1\|1249453_1250341_+\|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl\|CDD\|224131	COG1210, GalU, UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane].	1.26092e-171
NZ_CP009287.1\|WP_020426703.1\|1246927_1247563_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.37654e-62
NZ_CP009287.1\|WP_025704302.1\|1245257_1246904_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.15877e-31
NZ_CP009287.1\|WP_025703460.1\|1236082_1237999_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.03688e-41

>NZ_CP009287.1|WP_042266158.1|1239790_1240867_+|Gfo/Idh/MocA-family-oxidoreductase
MEKVVFGLVGGGWRAEFYLRIARELPEQFAVGAMFVRNKEKAEALSRTWGVRVYTTIGDFISAASYSFAVVSLKKDISTAYMMRLAEAGIPVLAETPPAPDLEQLKELWNRVGNSATIQIAEQVMFQPMHAARIALAASGRLGTVSQAQVSAAHGYHGISLIRRLLGTGFENASIRAQHFRSPIIQGPQRSGPPSAEARMQSVQTLGALDFGDKLGVFDFTGDQYFSWIRGSRMLVRGERGEIMNHDVSWLQAYDTPVYSRLRRIDAGHGGNLEGFYLKGIMLDGEWLYRNPFAPARLSEDEIAIAESMIRMQRHIGGGPSFYSLAEGSQDQYLALLLEQAAESGETVVSQRQPWAAE
>NZ_CP009287.1|WP_025703457.1|1239407_1239722_+|hypothetical-protein
MEWYTFGQMLIHIRLGQKAATPDGRTVLRTSAGLLWQGGRQDGDYVQIKDYLFSDIWRIYEDEASLKESCGRGIHEQKEREMLMNQYEEQRWNELGIRRARRED
>NZ_CP009287.1|WP_025703458.1|1238343_1239276_-|hypothetical-protein
MDWLHDYDKELRMVFQDCSSVISGFPDSLRIQGLSYLEQFNVFSTGSHKNYISYLLPFWLRDGYGLTEAEARGLSAGNIFCMLYFFIQDDLMDSDNSASRMLPLANLLYVEFLNRYRPLFPPESLFWLCFNRYILEWAESVAGEAHGDYFWNDRLKISHKASPLKLTSTAILLHTGNASLIPEAEDVLHTVLLTLQMLDDFEDWEQDLAEGSYNCLLSQAGHLTGIDQAALTKAQVKDYIFTKGGLAAYAGAASDHHRKLEDCRLNAPHLVAFHQFMVKNLQHMAAAVEAEKQLLQGGGLSYWLSKHMNL
>NZ_CP009287.1|WP_036702985.1|1238020_1238263_-|NHLP-leader-peptide-family-natural-product-precursor
MLSEAILRNQVIQKAWEDPGFKQRLLTNPKAALQEALGIELPDNITLKTVEEGSNEFYLVIPPSPASGVMKTDLTTLSTW
>NZ_CP009287.1|WP_025703460.1|1236082_1237999_+|HAMP-domain-containing-histidine-kinase
MRLFAKTLHLTIVLFVLCTACGAFQASAAGQHAPRELTSWQIQWGSPGEDTGQEVPLGETQGWIEADARQGTPELPKGISSAWTRITLPESQYTSPAVYIKTLYALHVKVYAGERLIFEDSRSYIHDNYSMLIPLSTEDLGKTLYIWTATLQDRIGIKDRVIVGEHSDLLKDYSKNGLADIVLGGAFLFVALVLFVCTFYLSKEYFSIATALSLVIASTGVLSITYSPFTYTFFSYLGPVSVVFFDLALLSLLPALTFLFEKIFGSGKFAIIRRFRKFQVAYSLFCIACLILNILSGNRLVEFYYFVSATIVGFIMILQFILLIACVILFSLRGNKDAITFALGFGTAALTGAVELAWYYYRKGNYDLIYWKWALVVFILSLIIILGRRLALNHQQVVKYSRELELFNNELQRSEKMEIISELAASVAHEVRNPLQVTRGFLQLLSEKSSGDEQKYLFMALSELDRASNIITDFLTFAKPEFEKISLLSVLEECKHIESIMLPLCHLNGGKMVLEVTGDLWVKGNSSKFKQAFINMIKNSIESLGEDGSIHIKAYAKGDKVFIHIKDNGAGMDPGVLSRLGEPYFSSNKTKGTGLGLMVTFRIIEAMGGEVRFMSSKGAGTESITILPLAEAPEGSGS
>NZ_CP009287.1|WP_081758556.1|1234073_1235975_+|sensor-histidine-kinase
MKLPSMKAAAAILMLFLLISIVPIGIAAQWGGGAGFSIPDSELKWETSDVCDPAAAAEAPDSEWVQADMNSVRPVAPADATAAWLRFPLPITGEPNPALMINKFAGHNLRVYVDHRLIYELQDLINYDEGRVLIPLSGTEGHSWLYLWSSGSGQGFGGIKGEITAGNYGKLLAFYVKQNLPDMVIGAAFLFVGAALMGCLLFLKLDFFKGGFFLVLVIVSFGILFITYSPFLPVILHIPDHWTQTFFDLALFTLLPSFTIYFEQIFGPGKHGLITKLRKFQLGYSLFCLVFLIVNTLLSHRLDELYRIATVDFLGLMMMVQFIYLLYVTLEAAFKGNRDAVIFSTGFSIFALLSLTELILYYANNSYHLQWWKWGVIAFVASLILILGRRFAGNHEQVLEYSRDLEKFNDDLQRSEKMEIISELAASVAHEVRNPLQVTRGFLQILGERSDQKEKEYLQMAMEELDRASLIITDFLTFAKPGMDTLDRFEVAEELRHVSGVLVPLAHLQGGTIELKLQSGLQVLGSTSKFKQAFINLIKNAIESLEEDGLITVAAWSSGEHIIVSVQDNGEGMKMSELAHLGEPYYSNKKKGTGLGLMVTFRIIEAMNGSIQFQSRKGEGTEVIVKLPSAAKK
>NZ_CP009287.1|WP_051424676.1|1233205_1233811_-|hypothetical-protein
MGNEFNKTEADFVYERYNKLGDVSPEQDIPLEELRPLGTITHQSPSDGTAGADLRPMESALASHDPAHEKPVDWDGVVDDGSDPALVGDPILAADIDLNAPEPALGRRADRVRSMTSPPPSERDEVLESDAIFAAGAAGLAGGAIDYAGDEELVDEEEELPLEDVPDADELQPGTAIDPAAPPIDVMPGTDVLNGSTGEEE
>NZ_CP009287.1|WP_025703462.1|1231669_1232995_-|voltage-gated-chloride-channel-family-protein
MRAIHTYWLKLMERNHFLALWSTFIKWIVLGGTVGILSGSASAIFLKSLDAVTEVRLNHGWLLYLLPLGGALVSYLYMRYGKNSAKGNNLILEQIQQGNEAIPLRMAPLVLFGTLVTHLFGGSAGREGTAVQMGGSLAEGFGKLIRISPLDRQILLMCGISGGFGSIFGTPLAGTLFGLEVIAIGLISHKALLPCFTASFIGDIVATRLWRVQHIHYHVDFFPPLTAAILLKVILASVLFGLASILFSELTHYLKKTFTLLVKNPMLKSALGGFIIIALVYIAGTRDYLGLGIPLIQDSFQTGVAPLAFLWKLIFTSFTLGTGFQGGEVTPLFAIGATLGNSLAGFLHLHAPFLASLGFIAVFCGATNTPIACFLMGIELFGSGGAVYMFIACLISYLFSGHSGIYTSQQIGISKSEWVRIPEGTTLGTVNQLRTTKKNVR
>NZ_CP009287.1|WP_025703463.1|1230392_1231631_+|MFS-transporter
MGFSWKRNLIVLWVGVFFCSTAYSISIPFLSIFLSDQLGVTNHLEIWSGVSFGITFLASALISPYWGSLADKYGRKPMLIRSGFSLAALYLINFFVHDPYVFIIVRIFQGLLAGFVPAAIAMVATNTPEEKTGYALSIMSTAGATGSIIGPLIGGVVSFYSSNRSAFLFSAVIVLVSALIATFFAKEENYDRSAPRSHVRDDIREAAANPAFMTLLMLAGLATFSVMILEPLLPIYLLDMGISKNSASLSSGIVFSAVGIATVIMAPQWGRIGSRKGFGFILFIGLVGGGIGNILQYFVSGYVEFAILRFAYGLFYAGVLPSVNAMIVQVIDPGFRGRAFGLNQAATQLATMAGPIIGGLLGAFIPIRWVFVINGVMLLVAAVLVKTRKLEAKVEAVEAAHASGQTAILENS
>NZ_CP009287.1|WP_174469046.1|1229474_1230227_-|peptidylprolyl-isomerase
MENVKRTRKKPVILLLVTLLLVIAAGCGSKPANHNAANSGNSSNAAGNAAGNAADNTASPAPQESAAAATEGLPSATASHPVVTIEMDNGGIIKAELYPEVAPNTVNNFISLIQKGFYDGTIFHRVIPGFMIQGGDPDGTGMGGPGYSIAGEFTANGFTNNLQHTQGVLSMARSQDMNSGGSQFFIMAAAYPSLDGQYAAFGKVTEGQDVVDAIVNLPRDSSDRPEQPPVMKKVTVDTLGVTYPEPEKVQ
>NZ_CP009287.1|WP_025704304.1|1241755_1243687_-|family-20-glycosylhydrolase
MSENHHLQLFPNPKVLEVSDGRFHLPAKGNIVLADEADRAALPAARKLQLTLSQVLQLNLSLSVGTRVSVRSVYHFSYSPMMPAQSYEIHVDEGGITVTYGSPEGAYYAAATLKQILLQCGRNLPFLHISDQPDFAARGLMIDISRNKIPKLETLYRIIDFMADLKLNQLQLYIEGSPFAYESFPQVWELETPITGEEILQLDTYCQERYIELVPNQNSFGHMEGWLTRPEFNALAEIPEGFMLPEDMYDSEMYPEGLFMHPGTFHTENPEVLQLLATMYDDLLPYFTSKHFNVGCDETYELGLGKSKPAADADGKGQLYLTFLQKIHALVLERGKTMQFWGDIIIQHPELIPQLPKDIVAMEWGYSAAHPFEADTMKFREAGIPFYVCPGTSSWNSLTGRSDNMMANLRSAAIHGKNNGAIGYLITDWGDFGHWQHLPISYPGFAYGAAVAWNVENNLEADVAAYLNTAVFHDRAGRIGQLLLDLGNYYKLESGVVRPNDTEMSMLLRTPLQQVQLVGKLTGEHFDHLEQYVEEIEARLEQTELECSDAGLVAAELRNGIHFVKHAVQLARIKKQLADGPSTLQPELIHRQIKDLDILLHHYRQLWVQRNRTGGLEQSVSKLVRLRAEYTRLAAELIDSAAL
>NZ_CP009287.1|WP_025704303.1|1243771_1244626_+|helix-turn-helix-domain-containing-protein
MSEVMDYMISPYPVRIIDPKVESSRLRLKAIRIGQAGHLPGRIWFRSNVVFEHWALVYIISGNGTYMENGGRVQQVRAGSLFFFRPGCSYSFGPAPGGNWDEYYINFNGTRVAEWVESGLLEGGTVFDAHASQELASVFEQVLALMEGGVPADADRAAAMLEGLLLECSLITEDHYRTRQPDILPLIREELNACIYGTPDLWGIAAKYHISMSTLRRLVRRSSGYPLHEYIHRLKMAEAKHLLLNTSLQVKAIAGMLHYADNFYFSRLFKKYMGVSPLICRNSL
>NZ_CP009287.1|WP_025704302.1|1245257_1246904_+|two-component-sensor-histidine-kinase
MNIKATAEDKIITIYRNISLSLTSLMYLLDHTGPSVFYKSLLIMVLFLFAQVFSIYYRRLRKWPRVLMLAVSIEMAGLIVLTLSTGGYDSPYKLYVLNPVLIAAGSLSIYFSWSLLFSYFGVISVFCYFFLNSSGKSFAEAVLDNGNLFLVMVLTVIIMQMVNRIKRQREAANARTNETMEHIKSLYHIVETSSQHDFMNIGQVITDYVVKLTKLDKALFWFAQKSGEPAPQSRQTGWHQEEERFLFSELEKHEHEWRLQREPVFKSLPGLGDFLLMPVRMSTRFVGMIGVKLEASEGLEGRRWYIQQLMFLSELSAIILERHELGVIENRLIITNEQNRIADEMHDSVSQSLFGIVYATHSLKQTWRKMSESELEEQIELIHDSATKVAKELRITIYSLSSKKSGGPTWLGMVRSHLKSLSRLNDVEIELKITGDDFSLPYPYHKALFRIISEATGNAIRHGAASRVDVELSLKPKWIRLSIIDDGVGFDTDLLWTESEDNTGGLGMKNMQYLAQSLGGDFQLSSSENAGTRILISIPVGMAELKNA
>NZ_CP009287.1|WP_020426703.1|1246927_1247563_+|response-regulator-transcription-factor
MKIVIVDDHPLVRRGLAAVISMQSNLHFAGEATNGQEALMIIEETQPDLVLIDLKLADESGLDVIKAARSRGLISKFILLTSSASREDFLKAEEVLVDGYVLKEALPEELLFAIQLVHKGRKYYDPGLMEDKMRMSGNSPTDELTPKEKEVLIELGQGASNREIASRLFISEFTVKKHVSQILAKLQVADRTQAALYANAVGLTKYEMSYD
>NZ_CP009287.1|WP_025704301.1|1247946_1248687_+|capsular-biosynthesis-protein
MEKTILDYINLIKKRLWLIMVFVLISCATTFYVSKNFVVPVYSASGQLLVNNAANVPESNNLNNLNFSLNLIESYKEILKSPTIMKSVVAEHPEFNLTEQALAGKLQIKSSEKSQVINLSVQDESYTKAATIVNAVSQTFIRSLPALMNLDNVTFLTPADPADAPGPVNSGSTMNIIISFVVSLMAAIGIILLLETLNGTLRTEKEAEFDLGLPVIASIPAIRKRDLGKSANANARVGEGTYVTAE
>NZ_CP009287.1|WP_025704300.1|1248670_1249312_+|CpsD/CapB-family-tyrosine-protein-kinase
MLRLNKSLITDINPSSHISESFRSLRTYIRQLGLLKGSGGQVLLFTSAEGGEGKTTILSNLAVSFVQDGKKVAVVDCNLRHPGLHSVFEVEGSHGLAAYLGGREEAKDIAVYGNLANLAVIPAGITNISPPDLLGSDKMAALLEELKISFDLILLDAPQAVEFSDARILAPLSDGLIIVARHGKTKRESLKKLKGLMEQTGVKILGIAMNQTR
>NZ_CP009287.1|WP_025704299.1|1249453_1250341_+|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MKKVKKVIIPAAGLGTRFLPATKAMPKEMLPIINKPTIQYIVEEAIASGIEDIIIVTGKGKRAIEDHFDNAFELESRLLEDGKLELLKEVQRSSKVEIHYIRQKEPKGLGHAVWCARRFIGDEPFGVMLGDDIVTGKTPCLKQLIDQYEETQNSVIGVQEIPDEFTNRYGIIEPDLQDGRLYRVNNFVEKPAAGTAPSNLAIMGRYVFTPKIFKYLDLQEKGAGGEIQLTDAIQKLNQSERVYAYNFDGTRYDVGERLGYILTTLEFALQSEDLRYPVMDAMAEYLSKAGQTLNS
>NZ_CP009287.1|WP_042266161.1|1250432_1251125_+|sugar-transferase
MSMQKLPEDYEAVLPKLYMLHAKEGSKEMDSYLVMKRIIDIFFSALGLLVLLPLFIVVAILIKLEDPKGKVFFRQNRVGKDEKLFPMYKFRSMVSNAEELKANLMAYNEVSGAMFKIKNDPRITRIGRFLRKTSIDELPQLWNVLLGHMSLIGPRPPLVEEVAQYTDYDKQRLMVTPGCTGYWQVNARNSVGFDEMVQLDLTYISIRSTMLDLKIIAKTGLMLLGSKDAY
>NZ_CP009287.1|WP_025704298.1|1251150_1252086_+|glycosyltransferase-family-2-protein
MLVYGDVPKISIIICTYNRSALLLKTLQSLLPLENLGQAEIIVVDNSSKDDTAAVVKRFIEAEGANMDIRYILEPVQGLSAARNTGILASKSPLIAFLDDDAIPCRNWITTIVSTFEQKPEVMAMGGKIAPIFESRRPDWLIKPFELPYTIVDLGNRIKEYPKRLHPCGANMAMRKVAFDISLFPLELGRKGDSLLSGEETWLFNQIESQGHSILYHPQMAVDHFVPANRLTEDWIMKRYYSQGISNAMKSEGVKDNLLLLGKTAAKIMYIAGDSILSRSQGKRLLNKCRLESIRGTLHMIWNRKRESAAG
>NZ_CP009287.1|WP_025704297.1|1252094_1253441_+|O-antigen-ligase-family-protein
MMNFEWGSKMNVLPYGMLYLMSALFLGAAVIYQPVIAVAIVLLIMLLVVSISRPELISYFVLLTTAISINFLYPGSMFGVEILSLYKLVILMLLVPCILVNGLKFRLSQPLWAMVGLLFITFGSSIWLPEMSGSIAVKAFIGLSLPFVFLLINWKKEVAERQIRIITMLPLVSVLAGIVLQMVHLHSFLDVEFTGAVRVQGANIPAHLAMLAFMGVGIAFIEIKRSTQHIRFFYIMLALNFLILIGTGTRGPILALVLMVLYYFYDISRQYLKGRTQYLIPLLCSVILIFSAVYLQLDNIKKRSFERTTDTAVDLSGRAEAWEYFLNKAADSPWSGRGLGAVTVANDGTLYKGFVVPHNEYIRFYFDGGYIGAILLLISLLAVFILVYRALAPPVKPYYLLFIAGFMIYSFSDNTLSTVQSIIPFCWYLNCLYRSSQPTDSPQKEVIR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_9

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_9

1285085-1285160

Orphan

Consensus_repeat	Method
AATTAGTGATCCTTTTTCCAACTT	CRISPRCasFinder

1 spacers

WYL

The CRISPR arrays of NZ_CP009287_9

>merge|NZ_CP009287|9|1285085-1285160|CRISPRCasFinder
AATTAGTGATCCTTTTTCCAACTTAGGCTGCGGAGAACGGGGTGCTGGGGCCAATTAGTGATCCTTTTTCCACTTG

>NZ_CP009287|9|7|1285085-1285160|CRISPRCasFinder
AATTAGTGATCCTTTTTCCAACTT	AGGCTGCGGAGAACGGGGTGCTGGGGCC
AATTAGTGATCCTTTTTCCACTTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_042266168.1\|1290077_1291487_+\|dNTP-triphosphohydrolase	unknown	unknown	gnl\|CDD\|223310
NZ_CP009287.1\|WP_047171578.1\|1291959_1296207_+\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|366944
NZ_CP009287.1\|WP_025709503.1\|1277729_1278695_+\|WYL-domain-containing-protein	WYL	COG2378_WYL_CAS-I:CAS-III	gnl\|CDD\|225253
NZ_CP009287.1\|WP_025708271.1\|1287989_1288370_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708273.1\|1288822_1289818_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378934
NZ_CP009287.1\|WP_025709508.1\|1282804_1283809_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223674
NZ_CP009287.1\|WP_025708272.1\|1288376_1288778_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025709497.1\|1275215_1275683_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|275056
NZ_CP009287.1\|WP_042266167.1\|1285379_1286165_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270255
NZ_CP009287.1\|WP_025709505.1\|1278963_1279953_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|223521
NZ_CP009287.1\|WP_025708270.1\|1287623_1287944_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025709509.1\|1283819_1284713_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224094
NZ_CP009287.1\|WP_025709507.1\|1281057_1282725_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|173858
NZ_CP009287.1\|WP_036706602.1\|1286184_1286847_+\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|226629
NZ_CP009287.1\|WP_025709501.1\|1276817_1277501_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025709506.1\|1279949_1280942_+\|dipeptide-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP009287.1\|WP_025703585.1\|1296494_1298267_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP009287.1\|WP_025709499.1\|1275946_1276633_+\|M50-family-metallopeptidase	unknown	unknown	gnl\|CDD\|315961
NZ_CP009287.1\|WP_025709495.1\|1274486_1275191_-\|AIM24-family-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP009287.1\|WP_025708269.1\|1287057_1287627_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|183571

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_042266168.1\|1290077_1291487_+\|dNTP-triphosphohydrolase	gnl\|CDD\|223310	COG0232, Dgt, dGTP triphosphohydrolase [Nucleotide transport and metabolism].	2.82461e-86
NZ_CP009287.1\|WP_047171578.1\|1291959_1296207_+\|S-layer-homology-domain-containing-protein	gnl\|CDD\|366944	pfam02156, Glyco_hydro_26, Glycosyl hydrolase family 26.	1.53226e-43
NZ_CP009287.1\|WP_025709503.1\|1277729_1278695_+\|WYL-domain-containing-protein	gnl\|CDD\|225253	COG2378, COG2378, Predicted transcriptional regulator [Transcription].	2.21111e-30
NZ_CP009287.1\|WP_025708273.1\|1288822_1289818_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378934	pfam12727, PBP_like, PBP superfamily domain. This family belongs to the periplasmic binding domain superfamily. It is often associated with a helix-turn-helix domain.	9.42822e-81
NZ_CP009287.1\|WP_025709508.1\|1282804_1283809_+\|ABC-transporter-permease	gnl\|CDD\|223674	COG0601, DppB, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	9.08359e-140
NZ_CP009287.1\|WP_025709497.1\|1275215_1275683_-\|hypothetical-protein	gnl\|CDD\|275056	TIGR04211, hypothetical_protein, SH3 domain protein. Members of this protein family have a signal peptide, a strongly conserved SH3 domain, a variable region, and then a C-terminal hydrophobic transmembrane alpha helix region.	0.000245822
NZ_CP009287.1\|WP_042266167.1\|1285379_1286165_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270255	cd13537, PBP2_YvgL_like, Substrate binding domain of putative molybdate-binding protein YvgL and similar proteins;the type 2 periplasmic binding protein fold. This subfamily contains domains found in ModA proteins of putative ABC-type transporter. ModA proteins serve as initial receptors in the ABC transport of molybdate in eubacteria and archaea. Bacteria and archaea import molybdenum and tungsten from the environment in the form of the oxyanions molybdate (MoO(4) (2-)) and tungstate (WO(4) (2-)). After binding molybdate and tungstate with high affinity, they interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The ModA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	7.8462e-99
NZ_CP009287.1\|WP_025709505.1\|1278963_1279953_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|223521	COG0444, DppD, ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	0
NZ_CP009287.1\|WP_025709509.1\|1283819_1284713_+\|ABC-transporter-permease	gnl\|CDD\|224094	COG1173, DppC, ABC-type dipeptide/oligopeptide/nickel transport systems, permease components [Amino acid transport and metabolism / Inorganic ion transport and metabolism].	1.85253e-110
NZ_CP009287.1\|WP_025709507.1\|1281057_1282725_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|173858	cd08493, PBP2_DppA_like, The substrate-binding component of an ABC-type dipeptide import system contains the type 2 periplasmic binding fold. This family represents the substrate-binding domain of an ATP-binding cassette (ABC)-type dipeptide import system. The DppA binds dipeptides and some tripeptides and is involved in chemotaxis toward dipeptides, whereas the OppA binds peptides of a wide range of lengths (2-35 amino acid residues) and plays a role in recycling of cell wall peptides, which precludes any involvement in chemotaxis. Most of other periplasmic binding proteins are comprised of only two globular subdomains corresponding to domains I and III of the dipeptide/oligopeptide binding proteins. The structural topology of these domains is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. Besides transport proteins, the PBP2 superfamily includes the ligand-binding domains from ionotropic glutamate receptors, LysR-type transcriptional regulators, and unorthodox sensor proteins involved in signal transduction.	0
NZ_CP009287.1\|WP_036706602.1\|1286184_1286847_+\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|226629	COG4149, ModC, ABC-type molybdate transport system, permease component [Inorganic ion transport and metabolism].	1.85286e-79
NZ_CP009287.1\|WP_025709506.1\|1279949_1280942_+\|dipeptide-ABC-transporter-ATP-binding-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	4.50474e-159
NZ_CP009287.1\|WP_025703585.1\|1296494_1298267_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.20509e-49
NZ_CP009287.1\|WP_025709499.1\|1275946_1276633_+\|M50-family-metallopeptidase	gnl\|CDD\|315961	pfam13398, Peptidase_M50B, Peptidase M50B-like. This is a family of bacterial and plant peptidases in the same family as MEROPS:M50B.	8.01933e-30
NZ_CP009287.1\|WP_025709495.1\|1274486_1275191_-\|AIM24-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	0.00252348
NZ_CP009287.1\|WP_025708269.1\|1287057_1287627_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|183571	PRK12522, PRK12522, RNA polymerase sigma factor; Provisional.	1.55687e-37

>NZ_CP009287.1|WP_025709509.1|1283819_1284713_+|ABC-transporter-permease
MGQASINVTPPHVPADKVSGPWRDAWKAFRKNKTAMLGLCIIVFFVLIALLAPLIAPYGFKEQELVNRLKAPSAGHWFGTDDLGRDMFTRIMYGARISLWVGFFAVIGSIIAGTFLGILAGFYGKWMDMLISRLFDILLAFPSILLAIAIVAILGPSLQNALYAIAIVNIPTYGRLVRAKVLSLKSEEYITAARAIGMTNTRILLTHILPNSLTPIIVQGTLGIATAIIEAAALGFLGLGAQPPDPEWGKMLSDSRQFIQKAPWTVVFPGLSIMLTVLGFNLMGDGLRDVLDPRMKN
>NZ_CP009287.1|WP_025709508.1|1282804_1283809_+|ABC-transporter-permease
MNSYLLKRIIVLIPVLIGMTIIVFSIIHAIPGDPAETILGQKATEQSKQALREQLGLDKPWLQQYFNYMGDLLQGDLGTSIRTKTPIAKEIMPYLAATLELTAAAMLFATIVGVNAGILGAWRQNSWFDYTAMIIALIGVSMPIFWLGLMEQLLFALKLHWLPSIGRMDQRNPVESITHLYVIDTIIAGQWGQLWTVMKHLILPSIALGTIPMAIIARMTRSSMLEVMNSDYIRTAKAKGMPQFLVVYKHALKNALIPVLTVVGLQTGALLGGAVLTETIFAWPGVGRYIFEAISSRDYPVIQTGILIIAFIFVVINLIVDLLYAAIDPRINYK
>NZ_CP009287.1|WP_025709507.1|1281057_1282725_+|ABC-transporter-substrate-binding-protein
MKTWSSLALAVTLGAVLFLSGCGGNNNNAGTEATTGSNAAATTAPESSPEAAATQDTLIVGRGGDSASLDPAIVTDGESLKIAHQVFDSLLEYKPGTSEVQASLADSWEVSADGLTYTFKLHPGVKFHDGTDFDAEAVVFNFTRWSDPASEFKFEGDSFDYYDSMFGPDGSRVIKEVKAVDATTVQFILNQPQAPFLQNIAMTSFGIASPAAIKEKKENFKNEPVGTGPYVFKEWKHNDSITLDKNSGYWKEGLPKLNKVIVRSIPDNSARFNALQNGEIDLMEDLSPDDLSTLEGNTELQKIERPPFNVSYLGFNFKKKPFDNVKVRQALNYAVNKQAIIDAFFSGQATAAVNPMPPSLWGYNDAVKDYDYDLDKAKALLAEAGYPEGLPDPVTLYAMPVSRPYMPDGKKVAEAIQADWEKIGVKTVIESPEWATYLDDTKAGEKDDIYMLGWTGDNGDPDNFLYTLLDKDAIPGNNRSFYVNEELHTLLINAQKETDQTKRSDLYKQAQEIIKADAPWIPLVHTTPLLAAKANLKGYVPGPTGTEYYSGIYFE
>NZ_CP009287.1|WP_025709506.1|1279949_1280942_+|dipeptide-ABC-transporter-ATP-binding-protein
MSDNLLEVKNLKKYYPVNKGFFNKTQAYVKAVDDISFSVRKGETFGLVGESGCGKSTTGRSLLRLIEPTAGEVWFEGRDITKLSMEEMRKRRREMQIVFQDPFSSLDPRYTVQRILEEPMIVHNAGNAKERRAAVERLADVVGLAKAHLQRYPHQFSGGQRQRIGIARALSLQPKLIIADEPVSALDVSIQSQVINLMQDLQKEFGLTYIFIAHDLSVVKHICDRVAVMYLGRIVEITDKNKLYDQPEHPYTQALLSAVPEPDPDIRKERVILQGEVPSPANAPAGCAFNTRCPRVMDVCRSTRPPLLETGPRHLTACHLYGGETRTHLT
>NZ_CP009287.1|WP_025709505.1|1278963_1279953_+|ABC-transporter-ATP-binding-protein
MVQPILKVEELHTHFFTERGEVPAVDGVDLYINPGEVLGVVGESGCGKSVTSLSILKLIPNPPGKIVSGRILLKGQDIVPLKEKEMRKIRGDAVAMIFQEPMTSLNPLFTVGQQIIETVRLHRGLSKKDARTHAVDSLRKVGIPRPEAIIDEYPHQLSGGMRQRVMIAMSISCSPELLIADEPTTALDVTIQAQILDLIRKLNEEQGTAVMLITHDLGVVAEMCQRVAVMYAGKVVEEGCVRDIFKNPLHPYTRGLIQSVPRMGETRERLYSIPGNVPILSAEMQGCRFAPRCSHVMELCRQSLPQLKLQEDNHSCRCWLHDSQQEDAV
>NZ_CP009287.1|WP_025709503.1|1277729_1278695_+|WYL-domain-containing-protein
MTDRLIRLMRIITLVQAKPGILARELAERCGNSERTIYRDMDALSAMHIPIIHLGHGKGYAFIGNFALYPLDWSEEESAAFSQLRDIMDDIKNTLPPSFESAYEKVMAAAYKQKAEREETMETAKREAGQLWMERSGYQDEPPPFLTEVLNAIMKQNSILADYSENAYAERNIQIDPYCLVPLENRYHLIGFCHRFGIIRTFHLHGFSNVKPTNLWFSKEQFDLQAFMEQKWSLDRDSLQVEFKIRFSERVLDRIKYEDMFVKPNKVDLHTRCLHFKVAIEQDIGFVRWILNFEEEAEIMEPLYYREMLRNQLEKWLSLYK
>NZ_CP009287.1|WP_025709501.1|1276817_1277501_+|hypothetical-protein
MQASFQPILTWSQERVFAAGAQNVVLLIEWKGISNPEESRKRTRKVVAREIELRIWLEAHVTFKGCHGCNAEVGEGRSILLKLGKLYSEARKYIALEFTMAAKPAGIHEVLWLQWQYKQPPVERIRELPLKKLSLEYTHHTDVLSERCCFHVEKHLELLKTEKLLEEAAVQRTKGSIETEFEHLRRQADDLLLLAARSGDMQLVKEAETVYKQLDAKSQASWRTASR
>NZ_CP009287.1|WP_025709499.1|1275946_1276633_+|M50-family-metallopeptidase
MNKWLKTLLFLAGSALLTRLIPFSSLFRNLDTMFHEFGHALVTLLLSGSVLRIELYADHSGVTYSAIEAGGKAVLVSLAGYTLASLFSLLLFYLYNRGRYRWGLLLASGVALVMLVLYVRGGFGMLWLGGFILLNLVMLFVWPKAGKYYYLFLAFLTLEESVVGSLYLVSAAAFTPGRAGDAANLARLTPLPAIVWALLFFVFSLLCAKWALGFFFKEERSRHSPASY
>NZ_CP009287.1|WP_025709497.1|1275215_1275683_-|hypothetical-protein
MKPKVKHTYAKLLCSVLLLLGLSVIFPAPAAKANYFSDLYNGLQNFSELPGEVNQLQESYRQTTEELQQTKEQLGQTLQQMADYQAQNAALQEQNRQLSQVVDELKNDRTARENYYNRIKVTVITGLALVLGYFLLIRVLRLGMRHRSRKGDRLR
>NZ_CP009287.1|WP_025709495.1|1274486_1275191_-|AIM24-family-protein
MNVDVQDEGDSGSGQAVAFTVEENEEIHVLHPQQIIAYQGPSSGRADRLMDVKGMYRKRKLIRSDMTGPCRFVAALPPGYRVKTFQLDGKSDLLYDFRHLFFYSKGVTMETRVLSMKNMLVTRDIIKVKFSGPGSIGILTEGTVCEAELHPFDPLYVDAGSIIAYPENAKLELTVYGNHLASQHMSYHWKMTGHGPVMFQAGRQSRRFERDNNEDGVIKRFLREVLPFGGVFIK
>NZ_CP009287.1|WP_042266167.1|1285379_1286165_+|molybdate-ABC-transporter-substrate-binding-protein
MEMFKKLAVVVMAALLAVALSAMPEKQVQAAGKTEIVVSAAASLQDSLDKIAVLYEKQHPDIDLVFNYGASGTLQKQIEQGAPADLFFSAGDKQMKALVDGGLISDNKQLLRNQLVLVVPSNSTASITALTQLTDKGFKKVAVGQPESVPAGQYAQQSLTAKKVWDKLQSKLVFAKDVRQVLSYVETGNADAGFVYKTDALTSSKVKIRLTVGAHVHKAINYPVGIVKDSKHTAEAKAFYSYVQTKAASDIFTSYGFKLAD
>NZ_CP009287.1|WP_036706602.1|1286184_1286847_+|molybdate-ABC-transporter-permease-subunit
MEIHWTDYFAPVWLSVKISVITSIIVFLLATLAARAMAGRRFPGYSLVETVLLLPLVLPPTVVGFVLLVILGRRSWIGKLYEQFTEHTILFTWGAAVIAAVVVAFPLVYRTVKAGFEGVEKDLEDAARAQGASELQVLAFVTLPLAGRSLAAGYVLGFARGLGEFGATIMVAGNIPGRTQTVPTAIYVAVDGGNMTLAWLWVCSIIAISALMLMFVNRRS
>NZ_CP009287.1|WP_025708269.1|1287057_1287627_+|sigma-70-family-RNA-polymerase-sigma-factor
MITDKQLIEGYRTGRREMLEFLVERYKDDLYRFCRHLTLNALEAEDLFQEVWVRVIRKLDRYDPERSFKAWLFQVALNMYRDRYRKWKRLYARLAEDKSCRAPFSELRDGALLTEEQILRNERYAHLEEGLRKLPKRYLGPLVLYYYEEFSYEEIGEMLGIPVGTVKSRLNQSKKLLQKVVEPWREDYR
>NZ_CP009287.1|WP_025708270.1|1287623_1287944_+|hypothetical-protein
MREKGCEEKQEELLREYYSGQLPAPAGLYAATLQRLRRTEGMSKGAAVLGGMGALALLLLWGCLLSGPIPLLWKLTLLLSFGAAPAVAAVVVVLYMSGREAGSVQN
>NZ_CP009287.1|WP_025708271.1|1287989_1288370_+|hypothetical-protein
MRNFKYFGLLVFWIITSGMLIFMAVAGSWMIPYMADLFSEDPVWFTTTVVAVLLFIGLYVTMGVFIYKDSSRKKMNTWLWLTAVFYIPNFMGVVLYFYARRQKSLAAIEVPAQICPHCGHIIHTGE
>NZ_CP009287.1|WP_025708272.1|1288376_1288778_+|hypothetical-protein
MNTKGQGRRLLLLALIGTLLLAGCEKQLMYAGSNTPHQIKASYRLLSGKEKKTLKLKEGDTVFLSYASKVEKGELSMKLYDPDHKLFKELETNKEGEEELKIQQSGSYKLEIVGTDTRGSFKVSYKIKKEVSE
>NZ_CP009287.1|WP_025708273.1|1288822_1289818_-|helix-turn-helix-transcriptional-regulator
MSENTSYTTEEIARLLKISKLKVYDLIKKGELPSYRVGKQMRVDLSDLEAYKQHSRSGISGSIPPVPAQAETPLFTPSSAPQLQHTQLPVQPGKAATDNVVITGQDMSLDLLATHLERSETSFRPLRSYAGSLDSLIAMYHGESDIVSTHLLDGDSGEYNLPYIRRLLVGFSYIVVHMLTRSAGFYVQKGNPQGIRGWSDLKQNGIRIINRERGAGARVLLDEQLRLHGIPSSHISGYAIEENSHFAIAGRVARGEADVGIGTEKAAKIIDGIDFIPLIQERYDLVMLKKPGHETLIRTVLDILRSAAFKNELSSIHGYDLSETGAVIYET
>NZ_CP009287.1|WP_042266168.1|1290077_1291487_+|dNTP-triphosphohydrolase
MTLIEKREHRQYPEITRLETSRAAYERDYSRLIHSPTFRRLQGKSQVFGAGTGDYYRTRLTHSLEVAQIAREAAKSLLRAYPEVETGQAENPGLVIDPEVVECAAIAHDFGHPPFGHKGEEVLDSILEQLVVKKTAEAVRKSGAGPVQQQTIRENMRRKYEHFEGNAHNFRLIMFLEKRENIDGLNLSDAVLLGINKYPFPGTVLKKGMYLHEWNYVSAIRSQWGIPDGKKTLEAQLMDLCDDIAYSAHDLEDGIKAGKIEVHEHFMHDAYIQRLIVEKITTLEDAFWTGWKEADIHIKVEEVLSSFLRVWMEKMPTCENDYSRTRREVKAYWVSTFVASLGVIEDGNWKKVTFIKDGQEDEDMLRTVSVLKSFAWVTMIRDLRVQRLQKRSEWILRRLWEAFLDPETSRAIIPSDWLQRFEKDQRQVKPIWTWEHMVIDYIAGMTDAFAEKIYNELYGLKVGSIYDLD
>NZ_CP009287.1|WP_047171578.1|1291959_1296207_+|S-layer-homology-domain-containing-protein
MKRFKKGLTTLLTTIMLVSTAAPALAYVKQDEHLGTHWAKDSIAKWQGNGVIQGYPDGSFRPDNKVTRAELVSMVNKLFGFSAASETSFADVPAGVWYARDLSVARQAGYYKGFPDNKAKADTQVTRQDAAALLAAVFSLKPSAGAASASFTDNAAISSYAKEAVRALQGTLQGYPDGSFRPDSPVTRAETVSIVDRLVSRYHHTAGTADGGAVQGNVLVNHTGVTLKDNVISGNLYLAPGIGNGEASLEKVTVQGDVYIAGGGEHSIHMKGAKLAHVVVNRPDGKVRIVGTGATAIKRMEIESASIIEMETDAVISEVVIAAGAAGTSIVGKGTVSKLDVRAGSVVLNGQPLAAGTYMVKGGAASPWTAAGGTPVPSQPASTPAPGSGSGGTEPTATPTPGSGNGGTEPPATPAPSSGNGGTEPSPRVVNLADADASSATRSLFVYLDDVRGTGTLFGQQHATDEGQSIAKRDGTESDVKNVVGAHPALFGWDTLSLEGKEKPGVAGDVYASIDNLADSMKHAYEAGGVLTLSAHMPNFVTGGDFYDLKGSVVSHILPGGDKHAEFNAFLDNIAVFANSLKDDSGSSIPVIFRPFHEQSGSWFWWGRAFTTEDQYKELYRYTVEYLRDIKNVHNFLYAYSPGGGFGTNEQQYLETYPGDDYVDVLGFDSYYNGEGQSWFDGVATEAATLSKIADAKHKIAALTEFGYQNMKVSGNSTPDFYTRLATALKSNPDAKRMAFMLTWADFTPSENSYVPYPLASGQEHQMMADFKSFFDDPYTLFSGEINGAYTQAVDTAGEQVFMHIASPTNQATVAEGTTLIRVRVLNGSPAKVVYTVGESALETPLVLDPETGFYVADWSPDAKLNGKIAAVTVKVYSEDGTVLLEQTNSVFVKISEVLLGAYTFDNGIDGVQSNGGYQAAIDSIGPGQFNGSGVLKVNASGMNPADTWQELKLELKNAKSVIDSVYLTEATRVKLDVWVPATAQPENGNASLQAVVQLPPDWNGKYGIGTTQISFADLPKETIDGVEYVHFTPTIDMTDAAALLAADDIAVSIVGSGLASGSIPVYIDNIGLYSTYVETGSDPAVVDDFESYLGSDEALNTKFVHAGGDATETALDANKHGGSYGMKYTYTLGASGYAGVTKALNVDWTGFNALQFWYKPDAKGQKLVIQINAGGSTYEYYPDTTTEQAALVTAKFSEFVPANGATGTLTKTNLKDVQKFSIYTNAKPDGTQLTSSMYFDDIKAVNDPDAGTVPGGSDGGGTAPGMLFDFEGSEQGWTFGTNTMGASHLSPATDGGKGVLSADYPLDTAAANVFDLNFVGDQDLSNGGTLKLHVRVSAGTAKGKVFLKSGANWDWANTDEVALTDQYQWISLDLNGFDWTGKVKIDKTMVRAMGLEIYSSDSAATVYIDDVILE
>NZ_CP009287.1|WP_025703585.1|1296494_1298267_+|methyl-accepting-chemotaxis-protein
MKKGLAMEGSAGRWNGLLKQGAAKIRSSIAIKIASGYVVLAILVMVLGGVSLYQMNGMHKNTGEIVNKMMPALNQIHNINYYTEHIMSISMQHILDTEGKNKAALEEERDVYIRKIADTMKSYQAGLRKDVQLQQFRALSSKWEAFMTINDQAIKLSGSGDEKLALEVSQKGISAFNAMQVDLQKLVNSSQDEAEDKGKLSSGIFHTAQSLSLVTVLLVLIVIGGINMLIRRLLINPVKKVTAHLQRIASGDLTAADTLISNTDEIGLLAKTVNGTNRTLHEIVGRIRNVARIIAEQSEGLLNNANQTKEGGSQIALTMEELAKASGSQAEAAVDASRAVEELNRLIEDFAGKGMELSEHSEQVRLKGDKGKELMESSVAQMSSIAEVVSQSMKTVEELNLKNEGIFRLVGSIRSISEQTHLLAINAAIEAARAGDSGRGFAVVAQEVRKLSEDVQQTVSEITGITQGIQEDSREMVQRLRSGVEKTEEGSRQIIETGQALAEINQSVHVMAGTIEVMGNDLQQMTGASETMNEFSQHISALAQQSAASVEETSASAHEQVSATDEVAAGIVQLRTMLAELEESVTRFQV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_10

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_10

1301287-1301360

Orphan

Consensus_repeat	Method
CATAAGCCGAATGAGCTTGATTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_10

>merge|NZ_CP009287|10|1301287-1301360|CRISPRCasFinder
CATAAGCCGAATGAGCTTGATTAGTGATACTTTTTCCAACATAGGCTACATCATAAGCCGAATGAGCTTGATAA

>NZ_CP009287|10|8|1301287-1301360|CRISPRCasFinder
CATAAGCCGAATGAGCTTGATTA	GTGATACTTTTTCCAACATAGGCTACAT
CATAAGCCGAATGAGCTTGATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_047171578.1\|1291959_1296207_+\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|366944
NZ_CP009287.1\|WP_042266168.1\|1290077_1291487_+\|dNTP-triphosphohydrolase	unknown	unknown	gnl\|CDD\|223310
NZ_CP009287.1\|WP_025703724.1\|1314213_1315416_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	unknown	unknown	gnl\|CDD\|366703
NZ_CP009287.1\|WP_025703895.1\|1303902_1306257_+\|YhgE/Pip-domain-containing-protein	unknown	unknown	gnl\|CDD\|224428
NZ_CP009287.1\|WP_025703894.1\|1303145_1303721_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP009287.1\|WP_025708273.1\|1288822_1289818_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|378934
NZ_CP009287.1\|WP_025703723.1\|1313735_1314176_-\|polymer-forming-cytoskeletal-protein	unknown	unknown	gnl\|CDD\|377376
NZ_CP009287.1\|WP_036707190.1\|1299489_1300095_+\|RNA-2',3'-cyclic-phosphodiesterase	unknown	unknown	gnl\|CDD\|274058
NZ_CP009287.1\|WP_025708271.1\|1287989_1288370_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708272.1\|1288376_1288778_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025709126.1\|1300177_1301071_+\|cell-wall-hydrolase	unknown	unknown	gnl\|CDD\|377847
NZ_CP009287.1\|WP_025703722.1\|1312874_1313660_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|378937
NZ_CP009287.1\|WP_042266170.1\|1298443_1299400_-\|D-2-hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|240625
NZ_CP009287.1\|WP_025703726.1\|1317236_1318145_+\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP009287.1\|WP_025708270.1\|1287623_1287944_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042266171.1\|1301667_1302882_-\|UDP-N-acetylglucosamine--LPS-N-acetylglucosamine-transferase	unknown	unknown	gnl\|CDD\|340861
NZ_CP009287.1\|WP_025703721.1\|1311955_1312882_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009287.1\|WP_025703585.1\|1296494_1298267_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|214599
NZ_CP009287.1\|WP_025703725.1\|1315683_1317114_+\|cardiolipin-synthase	unknown	unknown	gnl\|CDD\|234967
NZ_CP009287.1\|WP_025703720.1\|1306978_1311574_+\|glutamate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|236968

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_047171578.1\|1291959_1296207_+\|S-layer-homology-domain-containing-protein	gnl\|CDD\|366944	pfam02156, Glyco_hydro_26, Glycosyl hydrolase family 26.	1.53226e-43
NZ_CP009287.1\|WP_042266168.1\|1290077_1291487_+\|dNTP-triphosphohydrolase	gnl\|CDD\|223310	COG0232, Dgt, dGTP triphosphohydrolase [Nucleotide transport and metabolism].	2.82461e-86
NZ_CP009287.1\|WP_025703724.1\|1314213_1315416_-\|peptidoglycan-DD-metalloendopeptidase-family-protein	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	2.8594e-45
NZ_CP009287.1\|WP_025703895.1\|1303902_1306257_+\|YhgE/Pip-domain-containing-protein	gnl\|CDD\|224428	COG1511, COG1511, Predicted membrane protein [Function unknown].	3.48972e-138
NZ_CP009287.1\|WP_025703894.1\|1303145_1303721_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	7.79618e-14
NZ_CP009287.1\|WP_025708273.1\|1288822_1289818_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|378934	pfam12727, PBP_like, PBP superfamily domain. This family belongs to the periplasmic binding domain superfamily. It is often associated with a helix-turn-helix domain.	9.42822e-81
NZ_CP009287.1\|WP_036707190.1\|1299489_1300095_+\|RNA-2',3'-cyclic-phosphodiesterase	gnl\|CDD\|274058	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase. This protein family consists of bacterial and archaeal proteins with two tandem copies of Pfam domain pfam02834. Members for which activity has been measured perform a reversible, ATP-independent 2'-5'-ligation of what is presumably a non-phyiological substrate: half-tRNA splice intermediates from an intron-containing yeast tRNA. The physiological substrate(s) in prokaryotes may include small 2'-5'-link-containing oligonucleotides, perhaps with regulatory or biosynthetic roles. [Transcription, RNA processing].	1.72006e-34
NZ_CP009287.1\|WP_025703723.1\|1313735_1314176_-\|polymer-forming-cytoskeletal-protein	gnl\|CDD\|377376	pfam04519, Bactofilin, Polymer-forming cytoskeletal. This is a family of bactofilins, a functionally diverse class of cytoskeletal, polymer-forming, proteins that is widely conserved among bacteria. In the example species C. crescentus, two bactofilins assemble into a membrane-associated laminar structure that shows cell-cycle-dependent polar localization and acts as a platform for the recruitment of a cell wall biosynthetic enzyme involved in polar morphogenesis. Bactofilins display distinct subcellular distributions and dynamics in different bacterial species, suggesting that they are versatile structural elements that have adopted a range of different cellular functions.	1.11683e-26
NZ_CP009287.1\|WP_025709126.1\|1300177_1301071_+\|cell-wall-hydrolase	gnl\|CDD\|377847	pfam07486, Hydrolase_2, Cell Wall Hydrolase. These enzymes have been implicated in cell wall hydrolysis, most extensively in Bacillus subtilis. For instance Bacillus subtilis steB is expressed during sporulation as an inactive form and then deposited on the cell outer cortex. During germination the the enzyme is activated and hydrolyzes the cortex. A similar role is carried out by the partially redundant Bacillus subtilis CwlJ. It is not clear whether these enzymes are amidases or peptidases.	1.98809e-36
NZ_CP009287.1\|WP_025703722.1\|1312874_1313660_+\|ABC-transporter-permease	gnl\|CDD\|378937	pfam12730, ABC2_membrane_4, ABC-2 family transporter protein. This family is related to the ABC-2 membrane transporter family pfam01061.	5.139e-10
NZ_CP009287.1\|WP_042266170.1\|1298443_1299400_-\|D-2-hydroxyacid-dehydrogenase	gnl\|CDD\|240625	cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase. 2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants.	3.81601e-141
NZ_CP009287.1\|WP_025703726.1\|1317236_1318145_+\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	5.55808e-84
NZ_CP009287.1\|WP_042266171.1\|1301667_1302882_-\|UDP-N-acetylglucosamine--LPS-N-acetylglucosamine-transferase	gnl\|CDD\|340861	cd17507, GT28_Beta-DGS-like, beta-diglucosyldiacylglycerol synthase and similar proteins. beta-diglucosyldiacylglycerol synthase (processive diacylglycerol beta-glucosyltransferase EC 2.4.1.315) is involved in the biosynthesis of both the bilayer- and non-bilayer-forming membrane glucolipids. This family of glycosyltransferases also contains plant major galactolipid synthase (chloroplastic monogalactosyldiacylglycerol synthase 1 EC 2.4.1.46). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	1.02847e-84
NZ_CP009287.1\|WP_025703721.1\|1311955_1312882_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	2.13703e-97
NZ_CP009287.1\|WP_025703585.1\|1296494_1298267_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	5.20509e-49
NZ_CP009287.1\|WP_025703725.1\|1315683_1317114_+\|cardiolipin-synthase	gnl\|CDD\|234967	PRK01642, cls, cardiolipin synthetase; Reviewed.	2.63656e-173
NZ_CP009287.1\|WP_025703720.1\|1306978_1311574_+\|glutamate-synthase-large-subunit	gnl\|CDD\|236968	PRK11750, gltB, glutamate synthase subunit alpha; Provisional.	0

>NZ_CP009287.1|WP_025709126.1|1300177_1301071_+|cell-wall-hydrolase
MVIFKQNRCIALLVGVILVCFSAISLMGLVGPAKGKDTVQMNQLQSNAHPSDRISSSQALTALLRTKSSSGPMLYTTAAYLVQTQKIRHAAEWSSLDILKPQGAAAKTDILRQKAAVVKSTPPMAQQAAKTAAAKGSQTVLTKKTAIQQHPPTQLFFSRTKLLSQDQRNQATWTYAVSEGDLLLLQKIVMAEAEGEPYQGKVAVANVVLNRLRSANFPDTIHDVIYQKSQFSPVANGRLKRVKPNADSIKAVTAALSGTKAVTDDTYFFLSLKLAQDLTVHHSRQYAKTIGNHTFYK
>NZ_CP009287.1|WP_036707190.1|1299489_1300095_+|RNA-2',3'-cyclic-phosphodiesterase
MERKVSEAEMERLFIALKLPFALCVKLEKERSVLSGKLNFAKWTHSEDYHITLQFLGDTPKRSIPGLLEALKEIPAACSPFHLRLTEWGTFGRPESPKVLWAGVSGETDKLKDLQKRVISVTRPLGFIPEARAFKPHLTLARKYRNELPFSLEKLALLRTEEASGEGESDIADWTVDGFVVYATRMHAIPMYEMIEKFTFF
>NZ_CP009287.1|WP_042266170.1|1298443_1299400_-|D-2-hydroxyacid-dehydrogenase
MTKSIVCLQKLSHRQQDLIRDAAPGYTLTLGDGKAPDLAQLAEAEIVIGWGKGISDTLLSSESPLRWVQTWSAGVEKLPLTAMENKGILLTNASGVHAEPITAVIFGFMLLFTRNLHTAVRNQLNRKWHSEGSESELTGKTAVIAGTGSIGSETARIAKAFRMTTLGVSRSGEPAEGFDEVYTTDRLQDVVSQGDFLINTLPLTDETRLMFGAEIFAACKQGSYYINIGRGATTDTQALMDALNSGHLAGAGLDVFGTEPLPEDHPLWGMEQVVITPHCAGVTDRYADRVVEIFIENMKSYLKSGTPSRNLVDYSRQY
>NZ_CP009287.1|WP_025703585.1|1296494_1298267_+|methyl-accepting-chemotaxis-protein
MKKGLAMEGSAGRWNGLLKQGAAKIRSSIAIKIASGYVVLAILVMVLGGVSLYQMNGMHKNTGEIVNKMMPALNQIHNINYYTEHIMSISMQHILDTEGKNKAALEEERDVYIRKIADTMKSYQAGLRKDVQLQQFRALSSKWEAFMTINDQAIKLSGSGDEKLALEVSQKGISAFNAMQVDLQKLVNSSQDEAEDKGKLSSGIFHTAQSLSLVTVLLVLIVIGGINMLIRRLLINPVKKVTAHLQRIASGDLTAADTLISNTDEIGLLAKTVNGTNRTLHEIVGRIRNVARIIAEQSEGLLNNANQTKEGGSQIALTMEELAKASGSQAEAAVDASRAVEELNRLIEDFAGKGMELSEHSEQVRLKGDKGKELMESSVAQMSSIAEVVSQSMKTVEELNLKNEGIFRLVGSIRSISEQTHLLAINAAIEAARAGDSGRGFAVVAQEVRKLSEDVQQTVSEITGITQGIQEDSREMVQRLRSGVEKTEEGSRQIIETGQALAEINQSVHVMAGTIEVMGNDLQQMTGASETMNEFSQHISALAQQSAASVEETSASAHEQVSATDEVAAGIVQLRTMLAELEESVTRFQV
>NZ_CP009287.1|WP_047171578.1|1291959_1296207_+|S-layer-homology-domain-containing-protein
MKRFKKGLTTLLTTIMLVSTAAPALAYVKQDEHLGTHWAKDSIAKWQGNGVIQGYPDGSFRPDNKVTRAELVSMVNKLFGFSAASETSFADVPAGVWYARDLSVARQAGYYKGFPDNKAKADTQVTRQDAAALLAAVFSLKPSAGAASASFTDNAAISSYAKEAVRALQGTLQGYPDGSFRPDSPVTRAETVSIVDRLVSRYHHTAGTADGGAVQGNVLVNHTGVTLKDNVISGNLYLAPGIGNGEASLEKVTVQGDVYIAGGGEHSIHMKGAKLAHVVVNRPDGKVRIVGTGATAIKRMEIESASIIEMETDAVISEVVIAAGAAGTSIVGKGTVSKLDVRAGSVVLNGQPLAAGTYMVKGGAASPWTAAGGTPVPSQPASTPAPGSGSGGTEPTATPTPGSGNGGTEPPATPAPSSGNGGTEPSPRVVNLADADASSATRSLFVYLDDVRGTGTLFGQQHATDEGQSIAKRDGTESDVKNVVGAHPALFGWDTLSLEGKEKPGVAGDVYASIDNLADSMKHAYEAGGVLTLSAHMPNFVTGGDFYDLKGSVVSHILPGGDKHAEFNAFLDNIAVFANSLKDDSGSSIPVIFRPFHEQSGSWFWWGRAFTTEDQYKELYRYTVEYLRDIKNVHNFLYAYSPGGGFGTNEQQYLETYPGDDYVDVLGFDSYYNGEGQSWFDGVATEAATLSKIADAKHKIAALTEFGYQNMKVSGNSTPDFYTRLATALKSNPDAKRMAFMLTWADFTPSENSYVPYPLASGQEHQMMADFKSFFDDPYTLFSGEINGAYTQAVDTAGEQVFMHIASPTNQATVAEGTTLIRVRVLNGSPAKVVYTVGESALETPLVLDPETGFYVADWSPDAKLNGKIAAVTVKVYSEDGTVLLEQTNSVFVKISEVLLGAYTFDNGIDGVQSNGGYQAAIDSIGPGQFNGSGVLKVNASGMNPADTWQELKLELKNAKSVIDSVYLTEATRVKLDVWVPATAQPENGNASLQAVVQLPPDWNGKYGIGTTQISFADLPKETIDGVEYVHFTPTIDMTDAAALLAADDIAVSIVGSGLASGSIPVYIDNIGLYSTYVETGSDPAVVDDFESYLGSDEALNTKFVHAGGDATETALDANKHGGSYGMKYTYTLGASGYAGVTKALNVDWTGFNALQFWYKPDAKGQKLVIQINAGGSTYEYYPDTTTEQAALVTAKFSEFVPANGATGTLTKTNLKDVQKFSIYTNAKPDGTQLTSSMYFDDIKAVNDPDAGTVPGGSDGGGTAPGMLFDFEGSEQGWTFGTNTMGASHLSPATDGGKGVLSADYPLDTAAANVFDLNFVGDQDLSNGGTLKLHVRVSAGTAKGKVFLKSGANWDWANTDEVALTDQYQWISLDLNGFDWTGKVKIDKTMVRAMGLEIYSSDSAATVYIDDVILE
>NZ_CP009287.1|WP_042266168.1|1290077_1291487_+|dNTP-triphosphohydrolase
MTLIEKREHRQYPEITRLETSRAAYERDYSRLIHSPTFRRLQGKSQVFGAGTGDYYRTRLTHSLEVAQIAREAAKSLLRAYPEVETGQAENPGLVIDPEVVECAAIAHDFGHPPFGHKGEEVLDSILEQLVVKKTAEAVRKSGAGPVQQQTIRENMRRKYEHFEGNAHNFRLIMFLEKRENIDGLNLSDAVLLGINKYPFPGTVLKKGMYLHEWNYVSAIRSQWGIPDGKKTLEAQLMDLCDDIAYSAHDLEDGIKAGKIEVHEHFMHDAYIQRLIVEKITTLEDAFWTGWKEADIHIKVEEVLSSFLRVWMEKMPTCENDYSRTRREVKAYWVSTFVASLGVIEDGNWKKVTFIKDGQEDEDMLRTVSVLKSFAWVTMIRDLRVQRLQKRSEWILRRLWEAFLDPETSRAIIPSDWLQRFEKDQRQVKPIWTWEHMVIDYIAGMTDAFAEKIYNELYGLKVGSIYDLD
>NZ_CP009287.1|WP_025708273.1|1288822_1289818_-|helix-turn-helix-transcriptional-regulator
MSENTSYTTEEIARLLKISKLKVYDLIKKGELPSYRVGKQMRVDLSDLEAYKQHSRSGISGSIPPVPAQAETPLFTPSSAPQLQHTQLPVQPGKAATDNVVITGQDMSLDLLATHLERSETSFRPLRSYAGSLDSLIAMYHGESDIVSTHLLDGDSGEYNLPYIRRLLVGFSYIVVHMLTRSAGFYVQKGNPQGIRGWSDLKQNGIRIINRERGAGARVLLDEQLRLHGIPSSHISGYAIEENSHFAIAGRVARGEADVGIGTEKAAKIIDGIDFIPLIQERYDLVMLKKPGHETLIRTVLDILRSAAFKNELSSIHGYDLSETGAVIYET
>NZ_CP009287.1|WP_025708272.1|1288376_1288778_+|hypothetical-protein
MNTKGQGRRLLLLALIGTLLLAGCEKQLMYAGSNTPHQIKASYRLLSGKEKKTLKLKEGDTVFLSYASKVEKGELSMKLYDPDHKLFKELETNKEGEEELKIQQSGSYKLEIVGTDTRGSFKVSYKIKKEVSE
>NZ_CP009287.1|WP_025708271.1|1287989_1288370_+|hypothetical-protein
MRNFKYFGLLVFWIITSGMLIFMAVAGSWMIPYMADLFSEDPVWFTTTVVAVLLFIGLYVTMGVFIYKDSSRKKMNTWLWLTAVFYIPNFMGVVLYFYARRQKSLAAIEVPAQICPHCGHIIHTGE
>NZ_CP009287.1|WP_025708270.1|1287623_1287944_+|hypothetical-protein
MREKGCEEKQEELLREYYSGQLPAPAGLYAATLQRLRRTEGMSKGAAVLGGMGALALLLLWGCLLSGPIPLLWKLTLLLSFGAAPAVAAVVVVLYMSGREAGSVQN
>NZ_CP009287.1|WP_042266171.1|1301667_1302882_-|UDP-N-acetylglucosamine--LPS-N-acetylglucosamine-transferase
MRKKRVLLFSEGFGTGHTGAAYALAEGIKRLSPDVQCRVIELGKFLNPTVAPWILSAYRKTVSSQPKLVGMMYKTQYHKSLNRLTKLALHRIFYTHASQVIEQLKPDLIICTHPLPAAVISRLKQQGLDVPLYTLITDYDAHGSWINEEANRYLVSTSRVKSILTGRGVSPEKVAVTGIPLHPKFWGRSNKTLLRKELGLADIPTVLIMGGGWGLMFGKDVMDSLTARVDHIQLIFCMGSNEKLVAKMRANPLLNHPNVKILGYSSEINKLMDASDLLITKPGGMTCTEGQAKGIPMLFYSAIPGQEEKNCQYFVELGLAEVLDSDVVDKWFSLLLREYAGLEELRRRRTAPDRQQPSHCASTVLQLLGKSAAGMPQDPRGARAAVAAAAATQPRNEEAVYVTP
>NZ_CP009287.1|WP_025703894.1|1303145_1303721_+|TetR/AcrR-family-transcriptional-regulator
MAVVDRRQQVLQAATKSFSLFGYKATTMDQVAKIANVGKGTIYTFFTNKEQLFDEILRDVIMDMKGIAEREIKRDRSFFDNLHRVLDALLEFRSEHELFIKLSQESRDFGTPQANEGLDKIENVVLEYLEREVEHAITQGEVKPCEPKIVSLVMFRLYIVLTAELSKVHVPLTKEQIKSYFHLFLAEGLAE
>NZ_CP009287.1|WP_025703895.1|1303902_1306257_+|YhgE/Pip-domain-containing-protein
MKSLSVFAKDLGAALKNPKVLIPMFVVLFIPVLYSGLFLKAFWDPYGKMNELPVAVVNEDKGADYEGTKLAAGNDLVTELKKTDGFKWNFVTRAQAEAGLKDNTYYMAIVVPEDFSQSATTLLEADPKPAKIIYEPNEGYNFLAGQIGGTAVKDIKTKVSAKITEAYTTSVFDKIKDIGSGLGEAGDGATKIADGASKLDDGALKLKDNLLVLTEGTGKLLDGAAPLTKGVADLNNGAAALHTGSSTLAGGLQQLSSAHKQLQDGVSQTAAGSKQLNAGLQKTAAGAAALQAGTKSAVDGTAKLQAGTQTVVDGSAKLAAGLTSSMDGSAKLAAGLQASKDGSAKTSAGAKAVADGLQQLAKSNPQLAASPDVQKLLAASAAVAQGTAQLDQSQQQLLEGATALHSGQEQLVQGANQLHAGSQQLDAGVTQLHDGAQQLNAGSTQLLDGQKQLLAGAGALETGGSKLAAGMKQFGAKLNEAAAGGAKLADGSKTLEAGTTKLLAGAGQLSSGLSSVADGSKKLSDGAGQLKNGLDDLKSGSGELATKLGDAAAQTSSVNSSDKLVSMFAQPVQIDVQKVSAVPNYGTGFAPYFLSLGLFVGALICTLVIPMRDSEVIGASRFNRFISRTLTFSMMSVLQSLMAAIIVLYGLGLNVQNVPLFYAFTFITSIAFMWMIQAIVTWMDQPGRFVVIVILIFQLTTSAGTFPLELIPSWMKFFNPLLPMTYSVKGFKAVISTGNFSAMWSDAGLLAVYGVVFLAFTFTYFMTRDRDNEVAVKNEQILTV
>NZ_CP009287.1|WP_025703720.1|1306978_1311574_+|glutamate-synthase-large-subunit
MRHTELPAKQGLYDPQFEKDACGMGFVAHIKGKPSHDIVSNALTMLFNMEHRGGQGAEPNSGDGAGIMLQIPHRFFAGEASKLGFELPEQGHYGVGMIFLSHNEEIRARHEALLSEIIAEEGQQVLGYRDVPTFDEMLGKTAKAAKPYVRQVFIGRSEGIRDDLAFERKLYVIRKRAELSIRYGGAEESESFYVPSMSCRKIVYKGMLTTAQVGQFYLDLQDETLESAIALVHSRFSTNTFPSWERAHPYRFMIHNGEINTLRGNVNWMHARQSLFKSEVFGEDLGKIKPVVNPDGSDTAMFDNTFEFLYLSGRSLPHVAMMMVPEPWSNHDSMDEKKKAFYEYHSTLMEPWDGPAAMGFTDGVQIGAILDRNGLRPARYYVTKDDLIILSSEAGVLDIPAEDVLYKDRLRPGRMLLVDTKEGRIISDEEVKAAIASEQPYRQWLDEHLIGLDELPDAPELPNPKHDNVQQLQQSFGYTFEDLRKVLEPMASTGAEAVGSMGYDAPLAVLSDRPQRLYNYFKQMFAQVTNPPIDAIREELVTSTATTIGPERNLLKPEPESCRQISLESPILSNEDFAKIRHVRRAGFKSMSIPILFPAELGAEGLRIALERMNEAADRVMAKGHNILILSDRGVDRENAAIPALLAVSSLHHHLIRSGTRTKVSILLESGEPREVHHYALLLGYGVSAVNPYLAFESLDDMIGQGLLRGISHEKAVKNYIKAATKSVVKILSKMGISTIQSYRGAQIFEAVGLNAEFVDRYFTWTPSRIGGIGLEEVAAESLAHHNRAFTDKDGNDKVLDSGGEYQWRSDGEEHLFNPQTIHLLQHSVRSGDYGLYKKYAALVQGESEKHQTLRSMLQFKPVNAPVPLNEVESAESIMKRFKTGAMSFGSISKEAHETLAIAMNRIGGKSNTGEGGEDPARFTPDSNGDSRRSAIKQVASGRFGVTSNYLVNADEIQIKMAQGAKPGEGGQLPGRKVYPWVAEVRGSTAGVGLISPPPHHDIYSIEDLAELIYDLKNANPRANINVKLVSEVGVGTIAAGVAKGRADIILISGYDGGTGASPMNSIRHAGLPWELGLAETHQTLMLNNLRDRVVLETDGKMLSGRDLAVAVLLGAEEYGFATAPLVAVGCIMMRVCQMDTCPVGVATQNPELRKNFTGDPQHVVNFMTFVAQDLREIMAELGFRTIEEMVGRTDCLDAVKASSHWKKKGVDLSSLLHTPAMPEGSTRFNSQRQNHGLEETLDMSKLLDLAAPALESGTAVEASLPITNVNRAVGTILGSELTRKYGAAGLPDDTIRLHFTGSAGQSLGAFVPKGITITVEGDSNDYVGKGLSGGKLIIKPSPQATFAAEDNIIIGNTALYGATSGEAYISGIAGERFAVRNSGANVVVEGVGDHGCEYMTGGRVVVLGATGRNFAAGMSGGIAYVYDPDNTFIKRCNLEMVLLERVEEPAEIAELQGLIARHTELTGSNAGQRILDAWDEALPKFARVIPKDYKRMMEQIRKVEQTGLTGEAALMAAFEANMRELARVGG
>NZ_CP009287.1|WP_025703721.1|1311955_1312882_+|ABC-transporter-ATP-binding-protein
MPNTAEVVKPVASLMGVTKKIGSKTLVSDLTLDIPPGQIFGFLGPNGAGKTTTIRMMVGLISISRGDILICGRSIKDHFEEAVANIGAIVENPEMYKFLTGYQNLRQYARMVPGVDKKRINEVVELVGLGQRIHDKVKTYSLGMRQRLGVAQALLHRPKLLILDEPTNGLDPQGIRELRDYLRRLCQEEGTTVFVSSHLLSEMELMCDSVAIIQNGKLIDVKQLKAVGSEILPAGETLFEVSDPEAALVLLGTGVLKDGGVAVAADREVIAELNAKLVTGGVKVYGIRVLSRSLEDQFLEITGGEGIG
>NZ_CP009287.1|WP_025703722.1|1312874_1313660_+|ABC-transporter-permease
MGNFAALIHNENVKIYSRIRTWIMLIILAVMSALFPALFYFTSSDPSTTELWNSFQTTVSVSFFLNTIFTVVIASDSVAGEFSWGTIKLLLIRPWSRSKILLSKYISLILFSLLSTAVLIVFGYVSAMIFSSSSGLGGASVSDWSPAEYTFLGILCSYAELFVTAALAFMVSSVFRASGLAIGLSLFIMFAKDIIAAIFSPERYEWAKYLIFTHMDLHGYLLTDKGPGGSTLGFALVVLAVYYLIFMLVSWIVFRKRDVAA
>NZ_CP009287.1|WP_025703723.1|1313735_1314176_-|polymer-forming-cytoskeletal-protein
MWGKNKLQLPVKPTDSLIGHGGTLEGKLNCDTNLRIEGNFSGEIHCQGTVTVGEQGTVRSSIRAQDIIIAGKVYGDVIADQRLMMTDTGQLHGNILAGSLSIMEGSVLNGSVAMAEEPATEKAGGLQKKEHADKAGKRGSKQAETA
>NZ_CP009287.1|WP_025703724.1|1314213_1315416_-|peptidoglycan-DD-metalloendopeptidase-family-protein
MKKQPDHNRITLLVVREAGRPVRQLQLSKPLALVLPAAAALSLSSLVTSMHFHASRSISELEAEAAALSLTNLRMEMKVADKDKALLQLRSQVTELSEEADQIKEKLKSVSELEQQLQSLIDKDSSAASGSKEETSATKSSAPAGKLPIVSAAAAATALHSLTGIPSSPPVVVSSVSAIPPLSAVHFRLDAMPATFGSTVTPQVGGEYIAVYQNDPLELVRETKDDYEEIRSMLDEMMSSITSTITEAQEANTAKANLQAKKARAEKARLAPAVIWPTHSKVITSSFGYRSDPFNGVSAYHSGIDIAGSIGDPIYAAMDGVVTSAEQMGARGKYIILQHDNGLETWYMHLNTMLVAPGTKVSKGQKIALLGNTGRSTGPHLHFQVVKQNKPVNPLGYVQP
>NZ_CP009287.1|WP_025703725.1|1315683_1317114_+|cardiolipin-synthase
MKIFALILCLFILQIAVILLFEFRRPQRALAWLFIAFCCPPLGLLFYYFFGRDYWQSRKLDKRCISLFREIRAHLTGKIKLVADAADSGNPHFADHNELLHLLSRLSEIPATGRNKCQVLLDGREAFESMLAAMEAARDNIHMEFYIFRDDEIGERFQDVMIRKSRQGVKVRLLCDGLGSHKLGRRFIHTLRNAGVEVHFFLPPMISLLDRRFNFRNHRKIIVVDGRVGFTGGLNIGDDYLGKDPKLGYWRDTHLRLEGDAVYSLQYVFLKDWRLAAGEGMNHPRFFPKHECTEEEAVLVVASGPDGALDASQELFFAAMVAAKQRVWITSPYFIPDPAICRALKNAVLSGVDVRIIIPAVPDNRLVYNASLSYVENLQDAGVKFYRYQKGFMHAKVMIIDDLLGTVGSANLDMRSFYSNFELTAVLLRPGVIAGLAASFEQDLQHSEFIEPVVFRRRGAYVKLIESLCQLLSPLL
>NZ_CP009287.1|WP_025703726.1|1317236_1318145_+|YitT-family-protein
MTVSQKIFTNEEPKKPHKSEAFKRAKLIQRIVMMVLGAAMMSVALEIFLVPNQLIDGGITGISIMISHIFHIPLGIILTLLNLPFLVIGYKQIGKTFALSTLFAVVLMSIGTQLLHPVAPLTGEPLLAAVFGGVILGVGVGLVVRYGGSLDGTEIVAILVSKKLPFSVGEVVMFFNLFILSGAGFVFGWNNAMFSLIAYYIAFKVIDVTLEGLDQSKSVWIISDKFRDIGEALTERLGRGVTYLDGEGGFSGDNKKVIFVVITRLEEAKLKTIVEDWDSDAFVAIGNIHDVKGGRFKKKAIH

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_11

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_11

1409736-1409827

Orphan

Consensus_repeat	Method
AAGTTTTGTGAGCGATACTCCAGTGAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_11

>merge|NZ_CP009287|11|1409736-1409827|CRISPRCasFinder
AAGTTTTGTGAGCGATACTCCAGTGAATTCTGCTTCGTACAAAACTCGCTTCGTAAGCATATGCTAAGTTTTGTGAGCGATACTCCCGTGAA

>NZ_CP009287|11|9|1409736-1409827|CRISPRCasFinder
AAGTTTTGTGAGCGATACTCCAGTGAA	TTCTGCTTCGTACAAAACTCGCTTCGTAAGCATATGCT
AAGTTTTGTGAGCGATACTCCCGTGAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025708440.1\|1417232_1418309_+\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP009287.1\|WP_025708441.1\|1418533_1419265_+\|ThuA-domain-containing-protein	unknown	unknown	gnl\|CDD\|227150
NZ_CP009287.1\|WP_025708443.1\|1420814_1421324_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009287.1\|WP_042266198.1\|1399489_1400188_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP009287.1\|WP_025704082.1\|1403251_1404160_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP009287.1\|WP_025704088.1\|1409123_1409720_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704083.1\|1404202_1405459_-\|SLC45-family-MFS-transporter	unknown	unknown	gnl\|CDD\|340871
NZ_CP009287.1\|WP_025708439.1\|1416277_1417225_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP009287.1\|WP_025704091.1\|1412515_1413382_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP009287.1\|WP_174469021.1\|1411697_1412519_-\|ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_025704079.1\|1401815_1402400_+\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP009287.1\|WP_025704078.1\|1400376_1401531_-\|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl\|CDD\|378342
NZ_CP009287.1\|WP_042266205.1\|1414935_1415940_-\|substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|380630
NZ_CP009287.1\|WP_025708442.1\|1419265_1420234_+\|sugar-phosphate-isomerase/epimerase	unknown	unknown	gnl\|CDD\|224007
NZ_CP009287.1\|WP_025704086.1\|1407401_1408220_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP009287.1\|WP_025704087.1\|1408216_1409005_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|379203
NZ_CP009287.1\|WP_025704084.1\|1405463_1406201_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|176506
NZ_CP009287.1\|WP_036703553.1\|1406546_1407377_+\|methionine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270317
NZ_CP009287.1\|WP_025704092.1\|1413473_1414736_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270452
NZ_CP009287.1\|WP_025704089.1\|1409966_1411655_-\|alpha-glucosidase	unknown	unknown	gnl\|CDD\|200472

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025708440.1\|1417232_1418309_+\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.01232e-78
NZ_CP009287.1\|WP_025708441.1\|1418533_1419265_+\|ThuA-domain-containing-protein	gnl\|CDD\|227150	COG4813, ThuA, Trehalose utilization protein [Carbohydrate transport and metabolism].	3.86673e-133
NZ_CP009287.1\|WP_025708443.1\|1420814_1421324_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.23216e-16
NZ_CP009287.1\|WP_042266198.1\|1399489_1400188_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.89307e-72
NZ_CP009287.1\|WP_025704082.1\|1403251_1404160_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	3.97334e-46
NZ_CP009287.1\|WP_025704083.1\|1404202_1405459_-\|SLC45-family-MFS-transporter	gnl\|CDD\|340871	cd17313, MFS_SLC45_SUC, Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters. This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.62933e-106
NZ_CP009287.1\|WP_025704087.1\|1408216_1409005_+\|VOC-family-protein	gnl\|CDD\|379203	pfam13468, Glyoxalase_3, Glyoxalase-like domain. This domain is related to the Glyoxalase domain pfam00903.	5.66913e-37
NZ_CP009287.1\|WP_025708439.1\|1416277_1417225_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	9.55811e-27
NZ_CP009287.1\|WP_025704091.1\|1412515_1413382_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	3.678e-75
NZ_CP009287.1\|WP_174469021.1\|1411697_1412519_-\|ABC-transporter-permease-subunit	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	4.37814e-64
NZ_CP009287.1\|WP_025704079.1\|1401815_1402400_+\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	7.235e-59
NZ_CP009287.1\|WP_025704078.1\|1400376_1401531_-\|phosphodiester-glycosidase-family-protein	gnl\|CDD\|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	1.65968e-35
NZ_CP009287.1\|WP_042266205.1\|1414935_1415940_-\|substrate-binding-domain-containing-protein	gnl\|CDD\|380630	cd19975, PBP1_CcpA-like, ligand-binding domain of putative DNA transcription regulators highly similar to that of the catabolite control protein A (CcpA), which functions as the major transcriptional regulator of carbon catabolite repression/regulation. This group includes the ligand-binding domain of uncharacterized DNA transcription repressors highly similar to that of the catabolite control protein A (CcpA), which functions as the major transcriptional regulator of carbon catabolite repression/regulation (CCR), a process in which enzymes necessary for the metabolism of alternative sugars are inhibited in the presence of glucose. In gram-positive bacteria, CCR is controlled by HPr, a phosphoenolpyruvate:sugar phsophotrasnferase system (PTS) and a transcriptional regulator CcpA. Moreover, CcpA can regulate sporulation and antibiotic resistance as well as play a role in virulence development of certain pathogens such as the group A streptococcus. The ligand binding domain of CcpA is a member of the LacI-GalR family of bacterial transcription regulators.	1.03947e-132
NZ_CP009287.1\|WP_025708442.1\|1419265_1420234_+\|sugar-phosphate-isomerase/epimerase	gnl\|CDD\|224007	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism].	9.72701e-47
NZ_CP009287.1\|WP_025704086.1\|1407401_1408220_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	3.41627e-65
NZ_CP009287.1\|WP_025704084.1\|1405463_1406201_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|176506	cd08563, GDPD_TtGDE_like, Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.	3.94899e-114
NZ_CP009287.1\|WP_036703553.1\|1406546_1407377_+\|methionine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270317	cd13599, PBP2_lipoprotein_Gna1946, The membrane-associated lipoprotein Gna1946 from Neisseria meningitidis; the type 2 periplasmic binding protein fold. Gna1946 shares significant structural and sequence homology with the periplasmic substrate-binding domain of ATP-binding cassette (ABC) transporter involved in uptake of methionine (MetQ). The members of the MetQ-like family include the 32-kilodalton lipoprotein (Tp32) from Treponema pallidum, the membrane-associated lipoprotein-9 GmpC from Staphylococcus aureus, and Toll-like receptor 2-activating lipoprotein IlpA from Vibrio vulnificus. They all function as a receptor for methionine. This substrate-binding domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea.	2.78281e-76
NZ_CP009287.1\|WP_025704092.1\|1413473_1414736_-\|extracellular-solute-binding-protein	gnl\|CDD\|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.64605e-50
NZ_CP009287.1\|WP_025704089.1\|1409966_1411655_-\|alpha-glucosidase	gnl\|CDD\|200472	cd11333, AmyAc_SI_OligoGlu_DGase, Alpha amylase catalytic domain found in Sucrose isomerases, oligo-1,6-glucosidase (also called isomaltase; sucrase-isomaltase; alpha-limit dextrinase), dextran glucosidase (also called glucan 1,6-alpha-glucosidase), and related proteins. The sucrose isomerases (SIs) Isomaltulose synthase (EC 5.4.99.11) and Trehalose synthase (EC 5.4.99.16) catalyze the isomerization of sucrose and maltose to produce isomaltulose and trehalulose, respectively. Oligo-1,6-glucosidase (EC 3.2.1.10) hydrolyzes the alpha-1,6-glucosidic linkage of isomaltooligosaccharides, pannose, and dextran. Unlike alpha-1,4-glucosidases (EC 3.2.1.20), it fails to hydrolyze the alpha-1,4-glucosidic bonds of maltosaccharides. Dextran glucosidase (DGase, EC 3.2.1.70) hydrolyzes alpha-1,6-glucosidic linkages at the non-reducing end of panose, isomaltooligosaccharides and dextran to produce alpha-glucose.The common reaction chemistry of the alpha-amylase family enzymes is based on a two-step acid catalytic mechanism that requires two critical carboxylates: one acting as a general acid/base (Glu) and the other as a nucleophile (Asp). Both hydrolysis and transglycosylation proceed via the nucleophilic substitution reaction between the anomeric carbon, C1 and a nucleophile. Both enzymes contain the three catalytic residues (Asp, Glu and Asp) common to the alpha-amylase family as well as two histidine residues which are predicted to be critical to binding the glucose residue adjacent to the scissile bond in the substrates. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NZ_CP009287.1|WP_025704088.1|1409123_1409720_-|hypothetical-protein
MLIFLMYMFAILGISLLLAAAVLQIKLSSSSSARNKPVYGLTFFNSNFSEQYITPDKSHIIALDEEGKQMAVGFYNPASQEAASPAMFPFEHILGSEIVENALTLTKISKTSRITTSPAGQTLGAALQSGTAVNLDADNAEEINELTLIIYLDSADTPVLSIPFLPGLTPAKKCDLQYSQALSKARLVHEMIRGIVSA
>NZ_CP009287.1|WP_025704087.1|1408216_1409005_+|VOC-family-protein
MSSLQWDHTVHYINDLEQAVQTFTDNGLAAFPGGSHKLWGTHNALSYFGLNYVEFLAVENRDLAESADTANLVVKDAVKLLPEHEGFSRVAIRTDNIEQTASLLNQQGLKLSPVMDGRRLNRQGQWIEWRMLTIGGHFQGLVYPFVIQWKGTDEQRQQELKTAGIIRPHPAGAVEVRAAVFSVPDPVATAAHWSRILGLPVRNAGPWDGNSVSLAIGDKAFVFRQGTGEQMQELLLATDAPGLAGRTIRFGQADYVFTGIAT
>NZ_CP009287.1|WP_025704086.1|1407401_1408220_+|pyrroline-5-carboxylate-reductase
MAAKRIHFIGGGQMAEAIIRALISKGPYEAAQISVADVNEERSLYLKHTYGVRAAVSEAQEVLLAEAELIVIAVRPQDDLAAVGRFISAHAAGQAAVLSIVAGVSIARLGGYAGAERPIIRVIPNTLTDTGLGYSGAALNGFADKAQVDGFLNAFGKVLYLEEGQIDIFTGYGVAGPNYVYYFIESLADAGVLAGLPREQAWQVALENVEGAVAMLRHSGKHPRQLLDINNSPGGVGIHALYELNNSDFAAGLQRSVKAAVKRTTELGQVHS
>NZ_CP009287.1|WP_036703553.1|1406546_1407377_+|methionine-ABC-transporter-substrate-binding-protein
MKIRTLAAAALVGMSVVLGACGNKEAAGADKKDIVVGFGVGTYEEQFRLGIVPILEKEGYKVTIKTFSQNMQVNPAMKEGSIDASVFQSTAYMEGINKEIGADMAVLNFVPSAPQGLYSEKHKSLDEVKDGSVIAIPNDPVNQERAVRILEELGWVKVKPDAGTTDFNLSSVEPDKYQLKLEALDSAQILVSLADVDYGVVNGNYIANAKRQITEALKIENTPEQHRVTVTVNKDDLNTQWAKDLKAAYESKEFEEYIRAQDKYDGFILPDAWASN
>NZ_CP009287.1|WP_025704084.1|1405463_1406201_-|glycerophosphodiester-phosphodiesterase
MNNTINFAHRGASAACPENTMAAFRKGLELGATGIETDVQMTLDGGLVLIHDESLNRTTDRSGLVKDLTLSEVLEADAGSWFGAEFAGERIPALEELLDLLQGRDTILNIELKNGTYLYPGMEEKLIAAVREYGMSERIVLSSFNHYSLAYCKSLAPEIRTGILYGEGLYRPWDYAASLQADALHAYHLAVLPEFVAEASEHGIVYHPWTVNDPERMKTLIEAGVAGIITDVPDVLAGLLASKGV
>NZ_CP009287.1|WP_025704083.1|1404202_1405459_-|SLC45-family-MFS-transporter
MKKVWLLGFGFFSISITWSLYNAFVPFFLEKYVHSVALISFMMTIDNYFALFLQPWIGNRSDRTATRFGRRMPYLMIGMPLAAVLTMLIPFHSGLFTLLLFMMLMNLAMSLYRSPTVALMPDITPEHQRTKANGLINFMGGVGSILAFGAGSYLYDSSPVLPFAVAGLITLLCLFIVSRFIKEDRDGVNTAGANTAAESVADRSLQPEELVLPLSRPARVSLKKQLDRTTVWLLAAIFFWFVAYQGVETLFTLYGKHHLGLSEQAASFSLTFFSLAFVIFAIPSGWLGGRFGKKQIIILGVCGLTAVFALVGFAENVLLLRGLLLLGGIFWACININSYPYVVATGNEESIGTRTGIYYLVSSLAAITSPPLLGLLIDLTDYSVLFYAATVSMAFALVCLLLMKGRATAVNTVHSNKA
>NZ_CP009287.1|WP_025704082.1|1403251_1404160_+|GGDEF-domain-containing-protein
MEARNYILALSSVLIAALTVYSIFYLSPKFGGKSQKARAIRAVFMILVAGAGMGVMHLLGMQTLSEYAPDNESLFLPLTLYILTLAGMLYLFSRLHQFLAEREQLKELAYRDSLTGLLNKNGMDHFWDHCKPNEQLAVLFLDLNRFKAINDTLGHHVGDLLLRAVGTTLSQFSSKGKRHIFRIGGDEFVIIAKRCSRKDAEQLALQILEKTTRNYKLEKHELFVSASIGITMSHGRIDRQKLLNEADSAMYNAKQLGSGRYSLHKQDQSTRQSKPAGSSGSMLHTSLSSTNRLGDKQNSMRA
>NZ_CP009287.1|WP_025704079.1|1401815_1402400_+|histidine-phosphatase-family-protein
MTTIGLIRHGSTAWNKEGRIQGHTDNPLDEEGLRQAAAIAERLSGEQWDYIYSSDLLRAVQTAEVISKRLGIPIAGQVPGIREMNGGLIEGTTEDERVQRWGSGWKSMDMGLESDESGQQRGSRAIEEIAARHPGKRILIVSHGAILRSSLRKLVPGLDVGELLKNTSITHIVKDDSGWTCALYNCVSHMEAER
>NZ_CP009287.1|WP_025704078.1|1400376_1401531_-|phosphodiester-glycosidase-family-protein
MKKLSILTLVFILMLTALPALPASAAAAAAPKTAVYVDKDNHSFIPLRFLNGFAGIQAGMGGQTGKDITISKNGTTIVLASGQAGASVGSKSVKLSERPFSSNGTTYVPLSLISQTLGLQLAWNKTTASLTLTAGETSATLPVLTGSLISASSPAVVSSRHTYKVGGRAFPVQMVTVSLLHPALKLDVVLAGNTVGKTEALGSIAKRSGAVAAINGTFFDAYTAGAYKAPYGYIISRGKMLKDSPADKRTVFAYDNNLLAELIPGSKFMEHFNAGTVTGAIQAGPRLLVDGKVALNVAAEGFRDPKILTGGGSRSALGLTQDHKLILLTSGGATIPQLAQIMKQAGAYQAMNLDGGASSGLFYSGKYLTSPGRLISNALVVKTN
>NZ_CP009287.1|WP_042266198.1|1399489_1400188_-|response-regulator-transcription-factor
METILIVEDDAKLADLLDAYLSKYDFHTVVVEDFNRVLETFEQAAPSLVLLDVNLPRYDGFYWCRQLRKSSLCPILFISARDSGMDQVMALENGGDDYITKPFQYEVVLAKIRSHLRRAYGSYAQNQEERRLQTGGLTLLPERYVIQFAGQSAELTQKEAVLLEALMLKEGRVVTRERLLDLMWEDQHFIDDNTLNVYITRVRKKLKDLGLEEIVETVRGAGYRLNASGDSR
>NZ_CP009287.1|WP_025704089.1|1409966_1411655_-|alpha-glucosidase
MNKQWWKESVVYQIYPRSFQDSNGDGIGDLQGIISRLDYLELLGINVVWLCPVYQSPNDDNGYDISNYQNIMNEFGTLADWEELLAGLHARGMKLIMDLVVNHSSDEHAWFAESRKSPDSPYRDYYIWRAGKDGHEPNNWGSFFSGPAWEYDAQTGEYFLHLFSRKQPDLNWDNPKLRQEIYDMMTWWLDKGIDGFRMDVINLISKVPELPNVGKDQEDGERTYHFGGEYFVNGPRVHEYIQEMNREVLSKYDIMTVGEAIGVTPEEAALYVGEDRNELQMLFHFELMEVDSGPGGKWDVQPWKLADIKSIFSKWQTALHGKGWNSLYLNNHDQPRMLSRFGDDKHYPKESAKMLATLLHTLQGTPYIYQGEEIGMTNVKFDSINDYKDIEILNMYKEYRAAGYAEEEIMNSIYVKGRDNGRTPMQWSAEPQAGFTTGTPWLAVNPNYTEINAEQALADPDSIFHYYKKLIELRKSHDIFVYGDYAILAEEHEQVYAYLRTLGEEQLLVMLNFFGRPAAFELPACVIFKEKTLLIANYGVQPEEDIRSLSLRPYEARVYRLR
>NZ_CP009287.1|WP_174469021.1|1411697_1412519_-|ABC-transporter-permease-subunit
MIKKSTNWPVTVIIALCSLLILFPLYMTVAIALKNPEEMARSIFSLPTGLHFENFANAIKATNFFNALGNSATITVTAVVFILLTNSMVAYAIARNMNKRFFKMLYFYFISAMFIPFQIIMLPVVKVTTDLHMNNIPGLIILYIVYGLAFNVFVYVGYIRSIPYELEEAATVDGASTWGTFWRIIFPLLAPVNATIGILSCLSTWNDFMLPLILLGNQDSYTLPLVQYVFQGQFSTDFNLAFASYLLALSPMIVIYLFAQKWIIGGLTQGSIK
>NZ_CP009287.1|WP_025704091.1|1412515_1413382_-|sugar-ABC-transporter-permease
MAKRRAAFYLMTIPALLLFFAFHTFPALQGIYYSFTNWDGYSKSFDYVGFKNFINIFKDENVLNSYLFTFKYAIATTVLINIISLLIALGLNAKIKAKNFFRGVYFLPNILSVLIVGFIFNYLFSNVFPVWGEKLGSDFLSQNILGNSDWAWIGIVIVAVWQGIAYNTILYLAGLQTIPHDLYEASNLDGASRWREFWSITFPLLASFFTINMVLAMKGGLMVFDQIIALTGGGPGRSTQSIALLIYTGGFQGGEFAYQSANAVIYFIVIVVISALQLKFLQKREMDL
>NZ_CP009287.1|WP_025704092.1|1413473_1414736_-|extracellular-solute-binding-protein
MKKTMKPVTVSLLAMSLLSACGNNSGSNAATDDGGNAAAGEKVKIEFFQNKTEAKATFDKLVAQFNAANPNIVVSQINPPDAETVLKTRAAKQDLPDVIGLGATDTYKTLSASGLFEDFTGDPLVSSIQPAYVKMLNDLTGSSELNGIPFSANASGVIYNKAMFKEAGVAVPTTWDEFIAAAQKFKDSGKYAFYLTLKDSWTSLTPFNSLEPSILGTDYFKKRTEGSVTFKDSFREIAEKQLKLTEFAQKDIFGKGYNDGNTAFAKGESAMYLQGVWAIPEIMKANPSLELGVFPFPATNDPAKNKVISGVDTLLTISKDSKHKEEAKKFVEFLLQPQNVTAYITEQKAFPAVKGVTQDDPAMDGFKEAFTSGKLADFADHYIPGAMKVDTIIQSFLNSKDIDAYLKQLDTEWDKVANRK
>NZ_CP009287.1|WP_042266205.1|1414935_1415940_-|substrate-binding-domain-containing-protein
MNPTIKDVAQKANVSIATVSRVLNNLTGYSDKTKQKVNQAIKELGYQPNAIARGLINKRTQTIGVMFPKVSSAFSSDLLHGIDEFAHDSNYSVVVCNTDNDGKRTMKYLQLLREKQVDGIIFSSEVLSKEYYEVLKNMKIPVVLVSSQTDFAKVPYVKVDDYQAVYDAIQFLISKGHRKIAMISGTKGDPLAGTPRVQGYRKALEASGIAFDSSRLVYGDFSFESGSRAMEAILRKAGEATAVFAACDEMAIGALSAALKHGLNVPEDISIMGYDDLKPAQMVTPPLTTVRQPLYEMGKIASEKLIRMIETGEIAANKIIAHSIVERQTVRTLT
>NZ_CP009287.1|WP_025708439.1|1416277_1417225_+|AraC-family-transcriptional-regulator
MSIYLELPDVDKHFPFRSLICGGDELCYPHWHKEVEIIYVTKGRLNLGINDTPIRMEQGEIQFINGGDVHYFLASPESERVVIQFDLNLFQEVAALGGSGYSLRDLFTEMEHSSPAWPEAATAKVISLIESIYEEDTQRREGYAYLIKARMFELLTVILREIPKNRTQRQPKFSEDTLTQSRETMERLERIFAYVELHYQKSISLNEVARYMGFSPYYFTKLFKRNTGMTFVAFLNEYRLNKAKWILLNEDLPMSAVAEAAGFGSVKTFHHFFKEATGISPLKYHKTIFRNNTARMQEESAGADLYDRDIKTSGG
>NZ_CP009287.1|WP_025708440.1|1417232_1418309_+|Gfo/Idh/MocA-family-oxidoreductase
MTLKIGIIGCGGIANGKHMPALQKVEGAEMVAFCDIVPERAEKAKAEFGNESAAVYNDYKELLKDASIDVIHVCTPNISHAEISIAAMEAGKHVMCEKPMAKTTAEAQAMIDAAGRTGKKLTIGYQNRFRADSAYLHTVCENNGLGEVYYARAKAIRRRAVPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYKPKYAVGNAYHKLSGRKNAANAWGPWDPEKFTVEDSAIGFITMENGATIVLEASWALNTLDVGEARTVLCGTEGGADMEKGLRINGEEYGKTYEKHIGLDAAGVDFYDGAGDDPAVAEAKQWIECIVNDTEPVVKPEQALVVTRILEAIYKSSETGMPVFFD
>NZ_CP009287.1|WP_025708441.1|1418533_1419265_+|ThuA-domain-containing-protein
MTRVTVWNEYRHEREEDRIREVYPQGIHAQLASFLSEAGLDTATATLDEPEHGLTEEVLNNTDVLVWWGHVAHQEVSDEIVNRVHQRVLQGMGLVVLHSGHMSKIFMKLMGTSCDLKWREAGEKERLWVMDPSHPIAEGIGEYIDLEQEEMYGAHFDVPAPESLIFVGWFEGGNVFPSGSTYRRGSGKIFYFQPGHESYPTYYNKEIQQVIINGVNWCAPTKRDYPVYGHSEALEPIREKVGV
>NZ_CP009287.1|WP_025708442.1|1419265_1420234_+|sugar-phosphate-isomerase/epimerase
MKLGVFDPVFGSLSLDEMLDKIAAAGLNAVEIGSGGNPGNSHCPTDELLASEAAREAYLDKFTKRGIMISAFSCHNNPISPDREEARQGDEILRKSIKLASLMGVAVVNTFSGTAGDSDEAKTPNWPVTPWPTVYSDILTWQWEHKLIPYWKEIAQLAEEHGVKIGIELHGGFLCHTPYTILKLREATGPAIGANLDPSHLWWQGIDPVGAIKILGKAGAIHHFHAKDTYLDQDNINMYGLTDMQPYGDVQTRAWTFRSVGCGHSLSEWSDIMSALRTYGYDYVVSIEHEDPLMSVDEGFYRAVTNLQSILIREQPLDMWWA
>NZ_CP009287.1|WP_025708443.1|1420814_1421324_-|GNAT-family-N-acetyltransferase
MSHDIIIEQLEELQPEIVQQLNTLIIDVVADGASIGFLPPLGAEEAEAYWRGVLAPDVRLWVALEGETITGSVQLHSVSKPNAPHRAEIAKLMVHPQHRRKGIARRLMETAEQAAAAEGRTLLVLDTREGDPSNLLYQSRGFVEAGKIPDYVISGDGEMSATVIYYKHQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_12

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_12

1476618-1476691

Orphan

Consensus_repeat	Method
AATGGGGTGTACGAGCAAATTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_12

>merge|NZ_CP009287|12|1476618-1476691|CRISPRCasFinder
AATGGGGTGTACGAGCAAATTAGTTGCCCATTTTCCACTTCGCTTGCGGAAAATGGGGTGTATGAGCAAATTAG

>NZ_CP009287|12|10|1476618-1476691|CRISPRCasFinder
AATGGGGTGTACGAGCAAATTAG	TTGCCCATTTTCCACTTCGCTTGCGGAA
AATGGGGTGTATGAGCAAATTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025704960.1\|1488468_1489575_-\|linear-amide-C-N-hydrolase	unknown	unknown	gnl\|CDD\|367486
NZ_CP009287.1\|WP_025708970.1\|1469495_1470482_+\|SIS-domain-containing-protein	unknown	unknown	gnl\|CDD\|225132
NZ_CP009287.1\|WP_025705176.1\|1481814_1482588_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237874
NZ_CP009287.1\|WP_025705174.1\|1479355_1480504_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP009287.1\|WP_025708969.1\|1468527_1469247_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP009287.1\|WP_025708965.1\|1464485_1465790_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270452
NZ_CP009287.1\|WP_042267872.1\|1476941_1477814_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009287.1\|WP_025705173.1\|1478025_1479321_+\|GntP-family-permease	unknown	unknown	gnl\|CDD\|225330
NZ_CP009287.1\|WP_025708973.1\|1472485_1473703_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP009287.1\|WP_025708972.1\|1471400_1472009_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP009287.1\|WP_025705175.1\|1480564_1481590_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226355
NZ_CP009287.1\|WP_025708971.1\|1470601_1471159_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025705177.1\|1482905_1483898_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NZ_CP009287.1\|WP_025708966.1\|1465896_1466781_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP009287.1\|WP_042266215.1\|1485052_1487032_+\|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	unknown	unknown	gnl\|CDD\|223556
NZ_CP009287.1\|WP_179945398.1\|1473838_1476022_+\|helix-hairpin-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP009287.1\|WP_025704959.1\|1487582_1488443_-\|GyrI-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|185076
NZ_CP009287.1\|WP_025708967.1\|1466783_1467611_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_025705178.1\|1483981_1484773_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP009287.1\|WP_025708968.1\|1467636_1468455_+\|carbohydrate-kinase	unknown	unknown	gnl\|CDD\|238915

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025704960.1\|1488468_1489575_-\|linear-amide-C-N-hydrolase	gnl\|CDD\|367486	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.	3.70228e-29
NZ_CP009287.1\|WP_025708970.1\|1469495_1470482_+\|SIS-domain-containing-protein	gnl\|CDD\|225132	COG2222, AgaS, Predicted phosphosugar isomerases [Cell envelope biogenesis, outer membrane].	1.28694e-82
NZ_CP009287.1\|WP_025705176.1\|1481814_1482588_+\|hypothetical-protein	gnl\|CDD\|237874	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau.	7.0226e-06
NZ_CP009287.1\|WP_025705174.1\|1479355_1480504_+\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP009287.1\|WP_025708969.1\|1468527_1469247_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	4.63107e-57
NZ_CP009287.1\|WP_025708965.1\|1464485_1465790_+\|extracellular-solute-binding-protein	gnl\|CDD\|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.17902e-64
NZ_CP009287.1\|WP_042267872.1\|1476941_1477814_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.43676e-14
NZ_CP009287.1\|WP_025705173.1\|1478025_1479321_+\|GntP-family-permease	gnl\|CDD\|225330	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism].	1.22347e-53
NZ_CP009287.1\|WP_025708973.1\|1472485_1473703_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.64726e-71
NZ_CP009287.1\|WP_025708972.1\|1471400_1472009_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.50286e-17
NZ_CP009287.1\|WP_025705175.1\|1480564_1481590_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|226355	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms].	2.4986e-74
NZ_CP009287.1\|WP_025705177.1\|1482905_1483898_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	9.52087e-06
NZ_CP009287.1\|WP_025708966.1\|1465896_1466781_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.07614e-78
NZ_CP009287.1\|WP_042266215.1\|1485052_1487032_+\|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	gnl\|CDD\|223556	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].	5.05006e-176
NZ_CP009287.1\|WP_179945398.1\|1473838_1476022_+\|helix-hairpin-helix-domain-containing-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP009287.1\|WP_025704959.1\|1487582_1488443_-\|GyrI-like-domain-containing-protein	gnl\|CDD\|185076	PRK15121, PRK15121, MDR efflux pump AcrAB transcriptional activator RobA.	4.8108e-24
NZ_CP009287.1\|WP_025708967.1\|1466783_1467611_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	2.74252e-83
NZ_CP009287.1\|WP_025705178.1\|1483981_1484773_-\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	3.1298e-93
NZ_CP009287.1\|WP_025708968.1\|1467636_1468455_+\|carbohydrate-kinase	gnl\|CDD\|238915	cd01940, Fructoselysine_kinase_like, Fructoselysine kinase-like. Fructoselysine is a fructoseamine formed by glycation, a non-enzymatic reaction of glucose with a primary amine followed by an Amadori rearrangement, resulting in a protein that is modified at the amino terminus and at the lysine side chains. Fructoseamines are typically metabolized by fructoseamine-3-kinase, especially in higher eukaryotes. In E. coli, fructoselysine kinase has been shown in vitro to catalyze the phosphorylation of fructoselysine. It is proposed that fructoselysine is released from glycated proteins during human digestion and is partly metabolized by bacteria in the hind gut using a protein such as fructoselysine kinase. This family is found only in bacterial sequences, and its oligomeric state is currently unknown.	1.08425e-76

>NZ_CP009287.1|WP_179945398.1|1473838_1476022_+|helix-hairpin-helix-domain-containing-protein
MARQEQETITQAIAKELGISVKQVRTTVGLLDEGNTIPFIARYRKEMTGELDENVLRDIEERLSYLRNLGDRKKDVLRSIEEQGKLTQELQEQILKAVKLQEVEDLYRPFRQKRKTRASVAKEKGLEPLADWVMEQRRQGQPLEEAAKYIDAEKGVESAELALQGAMDIIAENIADDPTIRSWVRQYTASQGILVSEAKDAEQESVYENYYNYREPVHKMPPHRILAINRGERENVLKVGIEVTADKIHAFILRKLVKGPSPVKELLEAVTEDAYKRLIAPSVEREVRGEMTEKGETQAISIFSGNLRSLLLQPPVKGRNVLGVDPAYRTGCKLAVVDDTGKLLEVAVTYPTPPNNKKREAAAKFKELIAKYGIQLIVIGNGTGSRETEQFTAEVIAEIGDPGLAYLIVNEAGASVYSASKLAQEEFPDLDVAERSAASIARRVQDPLAELVKIDPKAIGVGQYQHDVSQKHLEESLKGVVESAVNHVGVDVNTASASLLSYVAGVNATIAKNIVKFREENGKFTTRKQLQKVPRLGAKSYEQCIGFLRIPGGDNTLDRTPIHPESYPVVDRLFRELGLDVASLGSKEVAEQLQAQDAAELAVKLDVGVPTLRDILESLQRPGRDPREELPLPIFRTDVLKIEDLVPGMEMQGTVRNVIDFGAFVDIGIKNDGLVHISQLSGSYVKHPMDVVSVGDNVTVWVLGVDLKKGRVSLTMRPPSGNDGGAK
>NZ_CP009287.1|WP_025708973.1|1472485_1473703_+|MFS-transporter
MKLLLRNRGAMLLLMLNIFLAFTGIGLVVPIMPTYMNELGIGGSIVGLLVAAFSLTQLILSPFAGGVSDRMGRKKIIVGGLVVFALSELLFGLAESSWLLFASRMLGGAGAAMIMPAVMAYVADTTSMEERAKGMGLINAAITTGFIIGPGLGGYLAELGIRVPFFAAAGAAAFVAVMTLIVLPESRLTAQLGTVKPMQENKDRLISQLVRSYREPYFFGLLIVFVLSFGLANYETVFGLFVDHKFGFTPKDIAFVITFGSISGAVIQVTAFSWILNRFGENKVISASLLISGLSIFLTLFVHGYWAIVTVTFIVFLAMDILRPAVGTQLSKMAVESQQGFVMGMNSAYTSLGNIAGPIVAGVLFDLDINFPYAVAALVLVLCFLLSLGSGKRMSRPDLQANHSD
>NZ_CP009287.1|WP_025708972.1|1471400_1472009_+|TetR/AcrR-family-transcriptional-regulator
MVRIKGRSDGEETKKRIVQKAAQLFVQKGYGAVTMNEVCSAAKVSKGSLYHHFPSKDELFLYVVEDDTEQWLSQWAEKSSRISGLEERFYALGEHYANDFQNPLIRALEEYARSRPHSDEVHQRLAQLCESASEACRNLLQEGMDTGYLIKGNLDNYVIIVSGLLEGVARVSEIMAAAKAPEDIMQYYREAIGLLLQGIRAR
>NZ_CP009287.1|WP_025708971.1|1470601_1471159_+|hypothetical-protein
MSIYNSIDDFLHRLESTLISNKEPVDANRILAELRASYDEVGRNGGKLYLKYADEIKAVLEYPEEVVISKAMYSEFKQGFRQLKKLWQAKRNVESFYIHCCCQIRQLLIFNRMSEEHCRSCHGSLLYYYEENSQMVIKECQACRRIYSRTGTVICASEGLKLSRANKQNLLGVVSPAEWIGYCGE
>NZ_CP009287.1|WP_025708970.1|1469495_1470482_+|SIS-domain-containing-protein
MNQEHVQQLEAAIQAVAQRKVTNFYFVACGGSLANVTPAQYILDREIEIPSAAYSSNEFIHRSPKALGPSSVVITCSHSGNTPETVAATTFAREKGALTICLTNLVDSPLWEAAEFKLHYNYAPYGEALRGEETSMAILYRLVFGILQTLYPNEKYANAISSIENGLHGVYERNKALTLEAAKAFGRNYKREKLIYTMASGINYSVAYSFAICLLQEMQWIHSSAIHAGEYFHGPFEITDFDVPFIVIKGLGETRPLDDRAYDFCVKYSDKTILIDAETFDLEGISPDVRPYFTNLVAGVVLRQYAQHLSEETGHALSVRRYMWKMEY
>NZ_CP009287.1|WP_025708969.1|1468527_1469247_-|GntR-family-transcriptional-regulator
MRHLQPDSIIPLYVQLKDIIKSDIEAGIMKPGQKIPTEFELCEMYSISRRTVRTAISELIEEGLLDRKQGKGTFICTPRIQAKFGPSVLGFTEICKLNNLRPSSKLVEQRQISATSKLAEALNVPVNSELVAIRRIMLADEVPVMMDYAVFTEAYNFLLQENMDNRSLYATIKAKRDVSFMRQRKSIQTIFADSAQAQYLEIPVGYPLLLSQGTVVSSTMEIVHYGEQHIVGDKFVLYI
>NZ_CP009287.1|WP_025708968.1|1467636_1468455_+|carbohydrate-kinase
MRIIAVGDNVADCYLDQGLYYPGGNAVNVAVNCKRNGCEEVAYIGVFGNDKKSDHIMDSLDKEGISYRYSRRVYADSGSPGVKLVGNDRVFVRGAQDTAQHLLRLRLMPADLEYIAGHDVCHTSCYSSIERELSAIKEHCDISFDFSTRTDEEYLEQVCPHIKYAFFSGAELDSAQIEALIRACHRLGTEIVGITKGSEGALFSRNGVLYKQGVTPADVVDTMGAGDSFIAGFLVSYLKKGVMEEALQSGANSAAYTCTFYGGFGYPKPIGE
>NZ_CP009287.1|WP_025708967.1|1466783_1467611_+|carbohydrate-ABC-transporter-permease
MAGKLPIYRLIVLLPLLVGVVLVMYPLFWMVSSSFKSYDEIFGAVWNLPSEWLFSNYATAWTKGIGNYFMNSVIVTVSTIAGVVIIASLCAYGLSRFRFRYSKTLFMFVLGGMMLDPQVCLVPLYKLLQNLNIHNTYFALILPYIAFRLSIAVLLIRSYFLGIPKEIEESATMDGCSVFRTYLSIFLPMSLPIIMTTIILTSYYAWNEFLFSIIFIDSDKYRTIPAGLMNFKDALSTDWGVLLAGLVISSLPLIILFIFMQKYFIQGMSDGSVKG
>NZ_CP009287.1|WP_025708966.1|1465896_1466781_+|sugar-ABC-transporter-permease
MRTRRTIAPYLFVLPCVLMLAVFVYMPLIQNFFYSFQNISLLSGKSSFAGFDNYRTLFSDPVVGKALINNVKYAVISLICQVGFGLVLAAILEEEFLRKVSAIFRTIFFIPVIISITVICLLFSFVYNPTDGLLNMFLQAVGLDAWAKPWLGSGTTAIYAVIAVSQWQSIGYCMMLFIVAIQKIPRDLYEAAKIDGAGKVKIFFSITLPQVKEMIFVNSLLTITGAFMVFNEPFILTKGGGPGTSSITIAVLMYQNGFVRDSMGYAATISLLIFVITAVLALIQTLSFRTGKGD
>NZ_CP009287.1|WP_025708965.1|1464485_1465790_+|extracellular-solute-binding-protein
MGRRLGLLLLAGLLVVLTACSSNNSSTATNGNGDSEGKTTTLKFFHRWPNEPRNSYFNYIKEEFEKQNPGVKIEMESVLNDNYKEKIKVLVSSGDIPDVFSSWSDSFAESLVSSGRVEDLTSMFDSDKDWAGTLVQNQLKSFTFDDKIYGVPFTMDGKVFFYNKKIFNKLGLEKPKTWDEFIALLDKLKAAGYDTPIIEGLQDSWAVGHYLGTMNQRMLSPEVLATDYAVGTGKFTDPGYLQVLKYWQKLTKYMGPNATSVNHEATRNMFIAGEVPIHYLQFAELGYLKDKPDLEFDYFNFPQFSEGKGNAEGLTGAPEGFMISKETANKELAEKFVKFIVSPENAAKFQKDVGSMTTVIGAATEENSPPGTLGAIEVIQNAAETTPWLDNAVDASVADAFMRGGQAIAADIETPEEVLKEVQAAAAKLQAVKK
>NZ_CP009287.1|WP_042267872.1|1476941_1477814_+|GNAT-family-N-acetyltransferase
MAALGEFYQAVTAGGPVIFWWVGEEENVVNVFCAFEGNRMVAKGQVGVFNIIPTESAPENKHKIFINLKVVPGREEDVELLNGVYERLLARAYAMKETLPDGHGTLLCVGNYSAETGYHRYFQEQQGYRYLHSLYSMQCDLTKPVVDMPLPDGLDWTHWGMETREEQNRYMKLESEVWPEAPIGAERLAEYRAHPLWTAIIAREAGTVVASVMAWQEDAGGVIEDVFVREAWRRRGIARFLLAEALKYLQGHGLETASLITGTDNDSAQALYQSVGFHIVSEETRYYMEL
>NZ_CP009287.1|WP_025705173.1|1478025_1479321_+|GntP-family-permease
MEGLTIGWYGALAGLALAIILILRKLNPVYSLFLGAIAGALIGGANLEQTVSVLVSGTQSVMGTVLRVLAAGVLAGVMMESGAAETMAQAIVKKFGGSKAILALALATMIITAVGVFIPVAVLIVAPIALSVGNKMGISKTALLLALSGGGKAGNIISPNPNTIAAARGFDLDLSHVMLAGFIPAVCGLIVTVIVASLLKNKGVKVLDAEAVYNEIDTSKYPPLGKAIVAPLVAVILLMINPIGSITGIDALSRIKVDALYILPVAGIIGLLAMGQGNKILAYTSSGLNKMTATVLILIGAGGIAGLIAASDLSVQIVSLIQAAGISGTFLAPISGILMAAATGSTSTGVILATGSFGQAILNMGTAPLAAAVMVHTGATVIDSLPQGNYFHVTADSMKMSIKQRMGLIPYEALVGGTMAVAATVIYGFLL
>NZ_CP009287.1|WP_025705174.1|1479355_1480504_+|glycerate-kinase
MSEKEKTFVLAPDSFKESMTAKEVCIAMEKGLRKVYPAAHYIHVPMADGGEGTVQSLVDASGGEIHYKEVTGPLGQKVAAKYGILGGGHTAAIEMASASGIHLVSKETRNPMVTTTYGTGELIRECLDRGIRKIIIGIGGSATNDGGAGMAEALGARFLDESGAELPRGGGSLDRLANIDISALDERLRHVQMIVACDVTNPLCGEQGASRVFGPQKGATPEMVQKLDVSLAHYAEVVKQQLHKDVRDLPGAGAAGGLGAGLLIFTQAVLQKGIEIVIEYTGLKEKLAGADVVFTGEGGIDFQTKFGKTPYGVARAAKASGQKVIAVAGYIGEGIDALYEEGFTAIFGIVPGASGLEKLLAEGPQNVERTCENIARILKLNG
>NZ_CP009287.1|WP_025705175.1|1480564_1481590_-|helix-turn-helix-domain-containing-protein
MFQLSESQAQEIVDKMMMDIPYNINIMNADGIIIGSGRRERVGTVHQGAVQALSTGRMVEVWEDSRFEKKGTNEPIVIGHTRVGVIGISGNPDEVRPFCNIVRTTVSLLIEQRNSLETQAHEANRRKAFLELLLNHQGAYSQKLRKEAAPYQIDLLLKTVVLYIKHFSAGADPDKLLLRYPSFAIDEETQLLILQESGDPGPLIRELLQGQPQVLIAAGRQEASIAESYRQARAAMNILLALKPASQVIAFENVEFLVKLSHAPLAPFNPTAKLEDAVDMIETLRSFINHNCSVSHTADDLNIHRNTLQYRLKRIQTLTGKDPRNLLQLFELTHGLLALYK
>NZ_CP009287.1|WP_025705176.1|1481814_1482588_+|hypothetical-protein
MITVKKILGHSALAALMLVLAACNSAPEAEPEQTQGSPSPSSSASAAASASASASPSVVPSASASIAPASSEPAGSQVPQAPDAPEEGMPPTAMEAASTVMRALSRGDMETLASWAHPDKGVRFSPYAYVDTATDLVFTRDQLKGLMKDSKPYVWREFAGSGEVIKLTFAEYFKRFVYDADFMNKAETALNKGLGQGTTLNNINEVYPKDSYDFVEYHIAGVDPSAEGMDWRSLRLVFEKMGEDRALVGIVHDQWTP
>NZ_CP009287.1|WP_025705177.1|1482905_1483898_-|S-layer-homology-domain-containing-protein
MNKYSFQMSAKKMTIACGILAASVSFGASAFAFSDIKGDPAESKINALHNKGVVNGVTTDRFAPKSKVTFAQGIQFIVNGLQLSPKASGGNSTVTSSVYFDKVKDKAWYASAFLIAKQNGLTLDKSVDPNAAMTRIQFAHLMTQALQSKGNFPVTLMYADISDGSKLSNAEMNSLQILVNTRLVTLEKNNTFRPNDAVTRAEAAVWIYDAAEFAQTVITPGVTPPDEGSAAPAQLYEGSVTLEKAGQGVNKATLTVNDLPNPGYGLVINRIEFGKDKTAVIYFSVTKPAPGKMYPMVITKGTAVTYLPEGYTATAKSLSAAPSSSGSSVR
>NZ_CP009287.1|WP_025705178.1|1483981_1484773_-|SDR-family-oxidoreductase
MADKRLKDKIAVVTGGASGIGKATAIRFAQHGAAVYILDLTPENLAETKQEIESIGGTAAVIQCDVSNPGLVEESINRIGGENGRIDVIFANAGINGTMAPIETLEMDDWDQTIHTNLRSTFATVKYAIPYMKENGGSMIITSSINGNRVFSNIGASAYSTSKAGQTAFMKMAALELAQYAIRVNAVCPGSIDTNIGKNTYKSEELEEVQIPVEFPDGNHPLEQAPGKPEQVANLVLFLASDESFHVTGTEIFVDGAESLLRG
>NZ_CP009287.1|WP_042266215.1|1485052_1487032_+|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein
MVQQQGTGRINVGIFAHVDAGKTTTTEHILYESGRIKAVGSVDSGTALTDSMEVERQRGISVRAALASFEWRGVQVNLVDTPGHVDFLSEVERSLRVMDCAVLILSAVEGVQAQSEMIWNALRKLGIPTLIFLNKMDRAGADPAAVLAQARTYLSGDILPVQQALGQEQNYTGALDLWAEAADPAARTELLEALAERDEALLETYMSGTPLDLTAWKEQLKAGAGAGKWFPLVYGVAAKGLGITQLLDAMTDYFPRAGGNPELPVSGIVYSIQRDKSMGRMAFVRLYQGTVRNRDTVLNYTQDVQGKVTQIRKVEGGRTEDVGALEAGDIAVVYGLSGVRIGDVLGVPDAIPQEAKLAVPLLTVRVHWEAAVDEHKVIGAFQELADEDPLLDTQWLQDERELHIKVMGPIQLEILDSVLESRYGLKVTFGQPSVIYRETPSRAGEGYVAYLMPKPCWAILRFRIEPGPPGSGLRYESLVRSSDLLPQYQNETARRVPEALMQGLYGWEVTDLKVTLTEGQHHVWHTHPLDFAVATPMAIMDGLNRIGTKLLEPILQVRIVVPEENGGRVMNDLVQMRGTFEPPVLQGERMIIEGRLPLATSLDYPVSLSSYTNGRSTFTSFFAGYEECPPDVRAERTRRGVNPLDQARYILSVRKALQG
>NZ_CP009287.1|WP_025704959.1|1487582_1488443_-|GyrI-like-domain-containing-protein
MVNNRAIGKAIVFIENSLYEPIAACDVAKAVSYSYYHFHRYFQGIMGETIGSYIRTRRLTQAAWDLVHSERKILDIGISLYFETAESFTRAFKDRYGITPTEYRNNGIDVLIGNRPPALISDNRVHPYADLSPQIVTVPETYTMGIRFITTISGNESIAMWQLFNQQIPDTFVGTRYGIFEAGETCSSDVFNPRSETTAFVGIEFPKGQPTLRCMERKKLCGGKYVKFIHKGTVKDLMQTYHYIWGVWFPKSGYELDNRDDFECYTERFAGEDVESSEIDIYFPIK
>NZ_CP009287.1|WP_025704960.1|1488468_1489575_-|linear-amide-C-N-hydrolase
MDKTKVYFKNFIGTSYEVGTQIGQWALSTPSLLKQVLLPPNAYPHDKFTKIKDLLDMYCQGINEEIKGFSDTIGVSSEQALFYAMTYLERGCSLMAVLPSKSKSGHTLMARNYDFNNEMEEMCFAFTNIKGKYRYIGSTLNLFGRCDGMNEHGLAVCKASNGLPVGNFEGGQKAGATGFSFWVVVRSILENCKTVQEAMEWTMSAPIGYNINLMLTDSSNKIALLQCMDGHKSYKLLDEYSEEAFLSVTNHALLEDIKPYQKMTIENSVVRNNKIVEMFTGKKQISKKDMKTLLSTSYPDGLCCHYYKEFFGTLRSMIFDVNDKTIEMTFGSPQVNEWQTFSVGALEMQEVEVLLPQEKARPDFYKIR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_13

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_13

1487174-1487340

Orphan

I-C

Consensus_repeat	Method
GTCGCTCCTTATGTAGGAGCGTGGATTGAAAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP009287_13

>merge|NZ_CP009287|13|1487174-1487340|PILER-CR
GTCGCTCCTTATGTAGGAGCGTGGATTGAAATTTCGCCATTGCCGGTAATTACTGCAGGCGGCTGGGGGCGTCGCTCCTTATGAGGAGCGTGGATTGAAATGACTTTGAAGATCTGGAGAAAGGAGAATCCCAATGTCGCTCCTTATGTAGGAGCGTGGATTGAAAA

>NZ_CP009287|13|1|1487174-1487340|PILER-CR
GTCGCTCCTTATGTAGGAGCGTGGATTGAAAT	TTCGCCATTGCCGGTAATTACTGCAGGCGGCTGGGGGC
GTCGCTCCTTATGAGGAGCGTGGATTGAAATG	ACTTTGAAGATCTGGAGAAAGGAGAATCCCAATG
TCGCTCCTTATGTAGGAGCGTGGATTGAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025704960.1\|1488468_1489575_-\|linear-amide-C-N-hydrolase	unknown	unknown	gnl\|CDD\|367486
NZ_CP009287.1\|WP_025705176.1\|1481814_1482588_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237874
NZ_CP009287.1\|WP_025705174.1\|1479355_1480504_+\|glycerate-kinase	unknown	unknown	gnl\|CDD\|376844
NZ_CP009287.1\|WP_025704965.1\|1493827_1494313_+\|SprT-family-protein	unknown	unknown	gnl\|CDD\|235290
NZ_CP009287.1\|WP_042267872.1\|1476941_1477814_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009287.1\|WP_025705173.1\|1478025_1479321_+\|GntP-family-permease	unknown	unknown	gnl\|CDD\|225330
NZ_CP009287.1\|WP_020426225.1\|1493124_1493262_-\|cortex-morphogenetic-protein-CmpA	unknown	unknown	gnl\|CDD\|380221
NZ_CP009287.1\|WP_025708973.1\|1472485_1473703_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340883
NZ_CP009287.1\|WP_167330838.1\|1492869_1493040_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025705175.1\|1480564_1481590_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|226355
NZ_CP009287.1\|WP_025705177.1\|1482905_1483898_-\|S-layer-homology-domain-containing-protein	unknown	unknown	gnl\|CDD\|306825
NZ_CP009287.1\|WP_025704964.1\|1493347_1493707_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042266215.1\|1485052_1487032_+\|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	unknown	unknown	gnl\|CDD\|223556
NZ_CP009287.1\|WP_179945398.1\|1473838_1476022_+\|helix-hairpin-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225094
NZ_CP009287.1\|WP_025704959.1\|1487582_1488443_-\|GyrI-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|185076
NZ_CP009287.1\|WP_025704966.1\|1494323_1494977_-\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP009287.1\|WP_025704962.1\|1491402_1491969_-\|CGNR-zinc-finger-domain-containing-protein	unknown	unknown	gnl\|CDD\|378696
NZ_CP009287.1\|WP_025705178.1\|1483981_1484773_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|235546
NZ_CP009287.1\|WP_025704961.1\|1490289_1491342_+\|GGDEF-domain-containing-protein	unknown	unknown	gnl\|CDD\|143635
NZ_CP009287.1\|WP_025704963.1\|1492230_1492725_+\|DinB-family-protein	unknown	unknown	gnl\|CDD\|378981

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025704960.1\|1488468_1489575_-\|linear-amide-C-N-hydrolase	gnl\|CDD\|367486	pfam03417, AAT, Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.	3.70228e-29
NZ_CP009287.1\|WP_025705176.1\|1481814_1482588_+\|hypothetical-protein	gnl\|CDD\|237874	PRK14971, PRK14971, DNA polymerase III subunit gamma/tau.	7.0226e-06
NZ_CP009287.1\|WP_025705174.1\|1479355_1480504_+\|glycerate-kinase	gnl\|CDD\|376844	pfam02595, Gly_kinase, Glycerate kinase family. This is family of Glycerate kinases.	0
NZ_CP009287.1\|WP_025704965.1\|1493827_1494313_+\|SprT-family-protein	gnl\|CDD\|235290	PRK04351, PRK04351, SprT family protein.	1.63126e-78
NZ_CP009287.1\|WP_042267872.1\|1476941_1477814_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.43676e-14
NZ_CP009287.1\|WP_025705173.1\|1478025_1479321_+\|GntP-family-permease	gnl\|CDD\|225330	COG2610, GntT, H+/gluconate symporter and related permeases [Carbohydrate transport and metabolism / Amino acid transport and metabolism].	1.22347e-53
NZ_CP009287.1\|WP_025708973.1\|1472485_1473703_+\|MFS-transporter	gnl\|CDD\|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.64726e-71
NZ_CP009287.1\|WP_020426225.1\|1493124_1493262_-\|cortex-morphogenetic-protein-CmpA	gnl\|CDD\|380221	NF033225, spore_CmpA, cortex morphogenetic protein CmpA. Members of this family are CmpA (cortex morphogenetic protein A), a small protein (37 amino acids) involved in endospore formation and frequently missed during genome annotation.	1.76744e-17
NZ_CP009287.1\|WP_025705175.1\|1480564_1481590_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|226355	COG3835, CdaR, Sugar diacid utilization regulator [Transcription / Signal transduction mechanisms].	2.4986e-74
NZ_CP009287.1\|WP_025705177.1\|1482905_1483898_-\|S-layer-homology-domain-containing-protein	gnl\|CDD\|306825	pfam00395, SLH, S-layer homology domain.	9.52087e-06
NZ_CP009287.1\|WP_042266215.1\|1485052_1487032_+\|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein	gnl\|CDD\|223556	COG0480, FusA, Translation elongation factors (GTPases) [Translation, ribosomal structure and biogenesis].	5.05006e-176
NZ_CP009287.1\|WP_179945398.1\|1473838_1476022_+\|helix-hairpin-helix-domain-containing-protein	gnl\|CDD\|225094	COG2183, Tex, Transcriptional accessory protein [Transcription].	0
NZ_CP009287.1\|WP_025704959.1\|1487582_1488443_-\|GyrI-like-domain-containing-protein	gnl\|CDD\|185076	PRK15121, PRK15121, MDR efflux pump AcrAB transcriptional activator RobA.	4.8108e-24
NZ_CP009287.1\|WP_025704966.1\|1494323_1494977_-\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	1.86401e-17
NZ_CP009287.1\|WP_025704962.1\|1491402_1491969_-\|CGNR-zinc-finger-domain-containing-protein	gnl\|CDD\|378696	pfam11706, zf-CGNR, CGNR zinc finger. This family consists of a C-terminal zinc finger domain. It seems likely to be DNA-binding given the conservation of many positively charged residues. The domain is named after a highly conserved motif found in many members of the family.	1.13997e-18
NZ_CP009287.1\|WP_025705178.1\|1483981_1484773_-\|SDR-family-oxidoreductase	gnl\|CDD\|235546	PRK05653, fabG, 3-oxoacyl-ACP reductase FabG.	3.1298e-93
NZ_CP009287.1\|WP_025704961.1\|1490289_1491342_+\|GGDEF-domain-containing-protein	gnl\|CDD\|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	2.94887e-50
NZ_CP009287.1\|WP_025704963.1\|1492230_1492725_+\|DinB-family-protein	gnl\|CDD\|378981	pfam12867, DinB_2, DinB superfamily. The DinB family are an uncharacterized family of potential enzymes. The structure of these proteins is composed of a four helix bundle.	2.63611e-08

>NZ_CP009287.1|WP_042266215.1|1485052_1487032_+|TetM/TetW/TetO/TetS-family-tetracycline-resistance-ribosomal-protection-protein
MVQQQGTGRINVGIFAHVDAGKTTTTEHILYESGRIKAVGSVDSGTALTDSMEVERQRGISVRAALASFEWRGVQVNLVDTPGHVDFLSEVERSLRVMDCAVLILSAVEGVQAQSEMIWNALRKLGIPTLIFLNKMDRAGADPAAVLAQARTYLSGDILPVQQALGQEQNYTGALDLWAEAADPAARTELLEALAERDEALLETYMSGTPLDLTAWKEQLKAGAGAGKWFPLVYGVAAKGLGITQLLDAMTDYFPRAGGNPELPVSGIVYSIQRDKSMGRMAFVRLYQGTVRNRDTVLNYTQDVQGKVTQIRKVEGGRTEDVGALEAGDIAVVYGLSGVRIGDVLGVPDAIPQEAKLAVPLLTVRVHWEAAVDEHKVIGAFQELADEDPLLDTQWLQDERELHIKVMGPIQLEILDSVLESRYGLKVTFGQPSVIYRETPSRAGEGYVAYLMPKPCWAILRFRIEPGPPGSGLRYESLVRSSDLLPQYQNETARRVPEALMQGLYGWEVTDLKVTLTEGQHHVWHTHPLDFAVATPMAIMDGLNRIGTKLLEPILQVRIVVPEENGGRVMNDLVQMRGTFEPPVLQGERMIIEGRLPLATSLDYPVSLSSYTNGRSTFTSFFAGYEECPPDVRAERTRRGVNPLDQARYILSVRKALQG
>NZ_CP009287.1|WP_025705178.1|1483981_1484773_-|SDR-family-oxidoreductase
MADKRLKDKIAVVTGGASGIGKATAIRFAQHGAAVYILDLTPENLAETKQEIESIGGTAAVIQCDVSNPGLVEESINRIGGENGRIDVIFANAGINGTMAPIETLEMDDWDQTIHTNLRSTFATVKYAIPYMKENGGSMIITSSINGNRVFSNIGASAYSTSKAGQTAFMKMAALELAQYAIRVNAVCPGSIDTNIGKNTYKSEELEEVQIPVEFPDGNHPLEQAPGKPEQVANLVLFLASDESFHVTGTEIFVDGAESLLRG
>NZ_CP009287.1|WP_025705177.1|1482905_1483898_-|S-layer-homology-domain-containing-protein
MNKYSFQMSAKKMTIACGILAASVSFGASAFAFSDIKGDPAESKINALHNKGVVNGVTTDRFAPKSKVTFAQGIQFIVNGLQLSPKASGGNSTVTSSVYFDKVKDKAWYASAFLIAKQNGLTLDKSVDPNAAMTRIQFAHLMTQALQSKGNFPVTLMYADISDGSKLSNAEMNSLQILVNTRLVTLEKNNTFRPNDAVTRAEAAVWIYDAAEFAQTVITPGVTPPDEGSAAPAQLYEGSVTLEKAGQGVNKATLTVNDLPNPGYGLVINRIEFGKDKTAVIYFSVTKPAPGKMYPMVITKGTAVTYLPEGYTATAKSLSAAPSSSGSSVR
>NZ_CP009287.1|WP_025705176.1|1481814_1482588_+|hypothetical-protein
MITVKKILGHSALAALMLVLAACNSAPEAEPEQTQGSPSPSSSASAAASASASASPSVVPSASASIAPASSEPAGSQVPQAPDAPEEGMPPTAMEAASTVMRALSRGDMETLASWAHPDKGVRFSPYAYVDTATDLVFTRDQLKGLMKDSKPYVWREFAGSGEVIKLTFAEYFKRFVYDADFMNKAETALNKGLGQGTTLNNINEVYPKDSYDFVEYHIAGVDPSAEGMDWRSLRLVFEKMGEDRALVGIVHDQWTP
>NZ_CP009287.1|WP_025705175.1|1480564_1481590_-|helix-turn-helix-domain-containing-protein
MFQLSESQAQEIVDKMMMDIPYNINIMNADGIIIGSGRRERVGTVHQGAVQALSTGRMVEVWEDSRFEKKGTNEPIVIGHTRVGVIGISGNPDEVRPFCNIVRTTVSLLIEQRNSLETQAHEANRRKAFLELLLNHQGAYSQKLRKEAAPYQIDLLLKTVVLYIKHFSAGADPDKLLLRYPSFAIDEETQLLILQESGDPGPLIRELLQGQPQVLIAAGRQEASIAESYRQARAAMNILLALKPASQVIAFENVEFLVKLSHAPLAPFNPTAKLEDAVDMIETLRSFINHNCSVSHTADDLNIHRNTLQYRLKRIQTLTGKDPRNLLQLFELTHGLLALYK
>NZ_CP009287.1|WP_025705174.1|1479355_1480504_+|glycerate-kinase
MSEKEKTFVLAPDSFKESMTAKEVCIAMEKGLRKVYPAAHYIHVPMADGGEGTVQSLVDASGGEIHYKEVTGPLGQKVAAKYGILGGGHTAAIEMASASGIHLVSKETRNPMVTTTYGTGELIRECLDRGIRKIIIGIGGSATNDGGAGMAEALGARFLDESGAELPRGGGSLDRLANIDISALDERLRHVQMIVACDVTNPLCGEQGASRVFGPQKGATPEMVQKLDVSLAHYAEVVKQQLHKDVRDLPGAGAAGGLGAGLLIFTQAVLQKGIEIVIEYTGLKEKLAGADVVFTGEGGIDFQTKFGKTPYGVARAAKASGQKVIAVAGYIGEGIDALYEEGFTAIFGIVPGASGLEKLLAEGPQNVERTCENIARILKLNG
>NZ_CP009287.1|WP_025705173.1|1478025_1479321_+|GntP-family-permease
MEGLTIGWYGALAGLALAIILILRKLNPVYSLFLGAIAGALIGGANLEQTVSVLVSGTQSVMGTVLRVLAAGVLAGVMMESGAAETMAQAIVKKFGGSKAILALALATMIITAVGVFIPVAVLIVAPIALSVGNKMGISKTALLLALSGGGKAGNIISPNPNTIAAARGFDLDLSHVMLAGFIPAVCGLIVTVIVASLLKNKGVKVLDAEAVYNEIDTSKYPPLGKAIVAPLVAVILLMINPIGSITGIDALSRIKVDALYILPVAGIIGLLAMGQGNKILAYTSSGLNKMTATVLILIGAGGIAGLIAASDLSVQIVSLIQAAGISGTFLAPISGILMAAATGSTSTGVILATGSFGQAILNMGTAPLAAAVMVHTGATVIDSLPQGNYFHVTADSMKMSIKQRMGLIPYEALVGGTMAVAATVIYGFLL
>NZ_CP009287.1|WP_042267872.1|1476941_1477814_+|GNAT-family-N-acetyltransferase
MAALGEFYQAVTAGGPVIFWWVGEEENVVNVFCAFEGNRMVAKGQVGVFNIIPTESAPENKHKIFINLKVVPGREEDVELLNGVYERLLARAYAMKETLPDGHGTLLCVGNYSAETGYHRYFQEQQGYRYLHSLYSMQCDLTKPVVDMPLPDGLDWTHWGMETREEQNRYMKLESEVWPEAPIGAERLAEYRAHPLWTAIIAREAGTVVASVMAWQEDAGGVIEDVFVREAWRRRGIARFLLAEALKYLQGHGLETASLITGTDNDSAQALYQSVGFHIVSEETRYYMEL
>NZ_CP009287.1|WP_179945398.1|1473838_1476022_+|helix-hairpin-helix-domain-containing-protein
MARQEQETITQAIAKELGISVKQVRTTVGLLDEGNTIPFIARYRKEMTGELDENVLRDIEERLSYLRNLGDRKKDVLRSIEEQGKLTQELQEQILKAVKLQEVEDLYRPFRQKRKTRASVAKEKGLEPLADWVMEQRRQGQPLEEAAKYIDAEKGVESAELALQGAMDIIAENIADDPTIRSWVRQYTASQGILVSEAKDAEQESVYENYYNYREPVHKMPPHRILAINRGERENVLKVGIEVTADKIHAFILRKLVKGPSPVKELLEAVTEDAYKRLIAPSVEREVRGEMTEKGETQAISIFSGNLRSLLLQPPVKGRNVLGVDPAYRTGCKLAVVDDTGKLLEVAVTYPTPPNNKKREAAAKFKELIAKYGIQLIVIGNGTGSRETEQFTAEVIAEIGDPGLAYLIVNEAGASVYSASKLAQEEFPDLDVAERSAASIARRVQDPLAELVKIDPKAIGVGQYQHDVSQKHLEESLKGVVESAVNHVGVDVNTASASLLSYVAGVNATIAKNIVKFREENGKFTTRKQLQKVPRLGAKSYEQCIGFLRIPGGDNTLDRTPIHPESYPVVDRLFRELGLDVASLGSKEVAEQLQAQDAAELAVKLDVGVPTLRDILESLQRPGRDPREELPLPIFRTDVLKIEDLVPGMEMQGTVRNVIDFGAFVDIGIKNDGLVHISQLSGSYVKHPMDVVSVGDNVTVWVLGVDLKKGRVSLTMRPPSGNDGGAK
>NZ_CP009287.1|WP_025708973.1|1472485_1473703_+|MFS-transporter
MKLLLRNRGAMLLLMLNIFLAFTGIGLVVPIMPTYMNELGIGGSIVGLLVAAFSLTQLILSPFAGGVSDRMGRKKIIVGGLVVFALSELLFGLAESSWLLFASRMLGGAGAAMIMPAVMAYVADTTSMEERAKGMGLINAAITTGFIIGPGLGGYLAELGIRVPFFAAAGAAAFVAVMTLIVLPESRLTAQLGTVKPMQENKDRLISQLVRSYREPYFFGLLIVFVLSFGLANYETVFGLFVDHKFGFTPKDIAFVITFGSISGAVIQVTAFSWILNRFGENKVISASLLISGLSIFLTLFVHGYWAIVTVTFIVFLAMDILRPAVGTQLSKMAVESQQGFVMGMNSAYTSLGNIAGPIVAGVLFDLDINFPYAVAALVLVLCFLLSLGSGKRMSRPDLQANHSD
>NZ_CP009287.1|WP_025704959.1|1487582_1488443_-|GyrI-like-domain-containing-protein
MVNNRAIGKAIVFIENSLYEPIAACDVAKAVSYSYYHFHRYFQGIMGETIGSYIRTRRLTQAAWDLVHSERKILDIGISLYFETAESFTRAFKDRYGITPTEYRNNGIDVLIGNRPPALISDNRVHPYADLSPQIVTVPETYTMGIRFITTISGNESIAMWQLFNQQIPDTFVGTRYGIFEAGETCSSDVFNPRSETTAFVGIEFPKGQPTLRCMERKKLCGGKYVKFIHKGTVKDLMQTYHYIWGVWFPKSGYELDNRDDFECYTERFAGEDVESSEIDIYFPIK
>NZ_CP009287.1|WP_025704960.1|1488468_1489575_-|linear-amide-C-N-hydrolase
MDKTKVYFKNFIGTSYEVGTQIGQWALSTPSLLKQVLLPPNAYPHDKFTKIKDLLDMYCQGINEEIKGFSDTIGVSSEQALFYAMTYLERGCSLMAVLPSKSKSGHTLMARNYDFNNEMEEMCFAFTNIKGKYRYIGSTLNLFGRCDGMNEHGLAVCKASNGLPVGNFEGGQKAGATGFSFWVVVRSILENCKTVQEAMEWTMSAPIGYNINLMLTDSSNKIALLQCMDGHKSYKLLDEYSEEAFLSVTNHALLEDIKPYQKMTIENSVVRNNKIVEMFTGKKQISKKDMKTLLSTSYPDGLCCHYYKEFFGTLRSMIFDVNDKTIEMTFGSPQVNEWQTFSVGALEMQEVEVLLPQEKARPDFYKIR
>NZ_CP009287.1|WP_025704961.1|1490289_1491342_+|GGDEF-domain-containing-protein
MQTYWLVIALHFLAQLAAYTFLPYERGAHEFYYGVLLYPTLLMGAVVGIAQWIDHRVSKYSFLTLFMAGTIIAMIIIHLNMDIRIIAALMLLPIFASAIFYRLDLTFFTFALQAVAFFVMYRWDYWFKYFFSSFDLIAIPIFLVVGTLVASIMIINGRELVSDLEASLTAKQDLLIENAIMRKLSTTDALTDLYNHISFHEFYDRALEYGDQGAPFHLALIDIDNFKLINDKYGHRTGDIILSRVAKAIRDITSPADIAARYGGEEFAVLFFEKTFEEAEAIAEKIRLRLSETPHEEMDGAAVTVSIGLKSYSQGNTKELLFEEVDALLYAAKHEGKNKVRTPYASTIFT
>NZ_CP009287.1|WP_025704962.1|1491402_1491969_-|CGNR-zinc-finger-domain-containing-protein
MLWDDFINSYWRDWRTGDRSKDKDKLQDQEWLAAWLEQHSLRAELPVKPKQLEQLQQLRSLLREAVQKLVKGCPLDRDLLERMNGYMLMGPVIRQVAWNADGKAEISFLPQRSDWEQVMAEIASSFAAALAEKETSRFRICENPDCLWVYYDDTRNRSKRYCDDKLCGNLMKVRRFRARKKADMEENF
>NZ_CP009287.1|WP_025704963.1|1492230_1492725_+|DinB-family-protein
MQNKISDVLLQNWDYAMDIEDWAPPLSAALEGVTSEQASWKPQGEAGNSIWETVNHLTYYKERLLIKLKGLPKLPEAESNDATFTVTESGEEAWVQAVAKLKKVHASLREVIEALEEGAYDWGGSGHAPGEEVMSLILHDSYHTGQIVLVRKLQGSWPTNRSFN
>NZ_CP009287.1|WP_167330838.1|1492869_1493040_+|hypothetical-protein
MMEPNYKDRSVEVERTEVQKKSDSSVVASTFIKYAAYLIIFFGLLFFLVKYVFPLF
>NZ_CP009287.1|WP_020426225.1|1493124_1493262_-|cortex-morphogenetic-protein-CmpA
MPQWLCHQLMKAYYKKDRRQIKLLNECWFFYRNSAEARDSIQREV
>NZ_CP009287.1|WP_025704964.1|1493347_1493707_-|hypothetical-protein
MPKMRYVILQQHQELQFVEMPEEYAYQLSALNLRLNKEIDKLTADNVPDLPLAIAECDSLELLREEHSMESGLAYINRLESAFSSIQESNYPLISLLTEIRALQAQLEQWYEEEEEGVH
>NZ_CP009287.1|WP_025704965.1|1493827_1494313_+|SprT-family-protein
MSNEELQQWIEQVSQDSFGVPFRHKASFNSRLSTTGGRYFIKSHNIEINPTQLEMFGREETERIIKHELCHYHLHLAKRGYMHRDADFKKLLAMVGGSRFCQTLPGAKARKPQPYRYKLVCTACATEYPRKRKADPKRYRCGNCAGKLKLVALEESQGKAK
>NZ_CP009287.1|WP_025704966.1|1494323_1494977_-|pentapeptide-repeat-containing-protein
MKTKIDPPKITDENSLLPQQVHTLQSKEEISHCLISDSLIEYQEADRVSFDKVIFRNVTMAESTLHAIELTDVIFENCDLSNVNFSDAFVHRTEFRNCKLIGTDFSRGRFQNVRMVDCIGDFASFRFGKFKGTAFTNCRLVSSDYYQAGLTHVEFSECDIDQATLAGCRLKEIDLSDCSFTGVHVDIEDLAGCIISAEQAASFAGLLGLVIKSDTDQ

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_14

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_14

2064728-2064839

Orphan

Consensus_repeat	Method
AGTGAGAGAGGTTAGGTGACGAGTGAGAGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_14

>merge|NZ_CP009287|14|2064728-2064839|CRISPRCasFinder
CGACACAACGGCGTGGTGACGAGTGAGAGAGGTTAGGTGACGAGTGAGAGATGTTTGGTGATCAGTAGAAAGGTTTGGTGATCAGTAGAAAGGTTAGGTTATCAGTGAGAGA

>NZ_CP009287|14|11|2064728-2064839|CRISPRCasFinder
CGACACAACGGCGTGGTGACGAGTGAGAGA	GGTTAGGTGACGAGTGAGAGATGTTTGGTGATCAGTAGAAAGGTTTGGTGAT
CAGTAGAAAGGTTAGGTTATCAGTGAGAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703401.1\|2073788_2075102_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP009287.1\|WP_025703398.1\|2077128_2079129_+\|beta-galactosidase	unknown	unknown	gnl\|CDD\|367090
NZ_CP009287.1\|WP_156124055.1\|2060394_2061171_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703397.1\|2079669_2080014_+\|multidrug-resistance-protein-SMR	unknown	unknown	gnl\|CDD\|224987
NZ_CP009287.1\|WP_025706418.1\|2055609_2056404_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|180604
NZ_CP009287.1\|WP_025707578.1\|2061208_2064034_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|224389
NZ_CP009287.1\|WP_025706420.1\|2054251_2055136_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176125
NZ_CP009287.1\|WP_025706414.1\|2058564_2059446_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP009287.1\|WP_025703402.1\|2072623_2073709_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP009287.1\|WP_025706415.1\|2057211_2058429_-\|sugar-efflux-transporter	unknown	unknown	gnl\|CDD\|341024
NZ_CP009287.1\|WP_025703399.1\|2076082_2076910_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_025706419.1\|2055288_2055594_+\|DUF1330-domain-containing-protein	unknown	unknown	gnl\|CDD\|377765
NZ_CP009287.1\|WP_042266371.1\|2064244_2064634_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|240291
NZ_CP009287.1\|WP_042267928.1\|2068994_2070350_+\|glycoside-hydrolase-family-30-protein	unknown	unknown	gnl\|CDD\|307945
NZ_CP009287.1\|WP_025703403.1\|2070578_2072336_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP009287.1\|WP_042266375.1\|2066421_2068689_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|185053
NZ_CP009287.1\|WP_025703400.1\|2075201_2076086_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP009287.1\|WP_025706413.1\|2059698_2060373_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042266373.1\|2065033_2066308_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|274977
NZ_CP009287.1\|WP_025706416.1\|2056791_2057196_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703398.1\|2077128_2079129_+\|beta-galactosidase	gnl\|CDD\|367090	pfam02449, Glyco_hydro_42, Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.	2.39738e-79
NZ_CP009287.1\|WP_025703401.1\|2073788_2075102_+\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.51148e-43
NZ_CP009287.1\|WP_025703397.1\|2079669_2080014_+\|multidrug-resistance-protein-SMR	gnl\|CDD\|224987	COG2076, EmrE, Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism].	3.75131e-21
NZ_CP009287.1\|WP_025706418.1\|2055609_2056404_+\|SDR-family-oxidoreductase	gnl\|CDD\|180604	PRK06523, PRK06523, short chain dehydrogenase; Provisional.	1.04681e-144
NZ_CP009287.1\|WP_025707578.1\|2061208_2064034_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	gnl\|CDD\|224389	COG1472, BglX, Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism].	2.40076e-71
NZ_CP009287.1\|WP_025706420.1\|2054251_2055136_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176125	cd08434, PBP2_GltC_like, The substrate binding domain of LysR-type transcriptional regulator GltC, which activates gltA expression of glutamate synthase operon, contains type 2 periplasmic binding fold. GltC, a member of the LysR family of bacterial transcriptional factors, activates the expression of gltA gene of glutamate synthase operon and is essential for cell growth in the absence of glutamate. Glutamate synthase is a heterodimeric protein that encoded by gltA and gltB, whose expression is subject to nutritional regulation. GltC also negatively auto-regulates its own expression. This substrate-binding domain has strong homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	4.63922e-62
NZ_CP009287.1\|WP_025706414.1\|2058564_2059446_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	3.90624e-23
NZ_CP009287.1\|WP_025703402.1\|2072623_2073709_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.07483e-56
NZ_CP009287.1\|WP_025706415.1\|2057211_2058429_-\|sugar-efflux-transporter	gnl\|CDD\|341024	cd17471, MFS_Set, Sugar efflux transporter (Set) family of the Major Facilitator Superfamily of transporters. This family is composed of sugar transporters such as Escherichia coli Sugar efflux transporter SetA, SetB, SetC and other sugar transporters. SetA, SetB, and SetC are involved in the efflux of sugars such as lactose, glucose, IPTG, and substituted glucosides or galactosides. They may be involved in the detoxification of non-metabolizable sugar analogs. The Set family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.88337e-109
NZ_CP009287.1\|WP_025703399.1\|2076082_2076910_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.96976e-71
NZ_CP009287.1\|WP_025706419.1\|2055288_2055594_+\|DUF1330-domain-containing-protein	gnl\|CDD\|377765	pfam07045, DUF1330, Domain of unknown function (DUF1330). This family consists of several hypothetical bacterial proteins of around 90 residues in length. The function of this family is unknown.	6.40224e-21
NZ_CP009287.1\|WP_042266371.1\|2064244_2064634_-\|hypothetical-protein	gnl\|CDD\|240291	PTZ00146, PTZ00146, fibrillarin; Provisional.	5.51792e-05
NZ_CP009287.1\|WP_042267928.1\|2068994_2070350_+\|glycoside-hydrolase-family-30-protein	gnl\|CDD\|307945	pfam02055, Glyco_hydro_30, Glycosyl hydrolase family 30 TIM-barrel domain.	2.17984e-41
NZ_CP009287.1\|WP_025703403.1\|2070578_2072336_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.31152e-47
NZ_CP009287.1\|WP_042266375.1\|2066421_2068689_+\|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein	gnl\|CDD\|185053	PRK15098, PRK15098, beta-glucosidase BglX.	7.09489e-113
NZ_CP009287.1\|WP_025703400.1\|2075201_2076086_+\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	8.21912e-76
NZ_CP009287.1\|WP_042266373.1\|2065033_2066308_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|274977	TIGR04094, AraC_family_transcriptional_regulator, YSIRK-targeted surface antigen transcriptional regulator. Bacteria whose genomes encode only one protein with the YSIRK variant form of signal peptide (TIGR01168) were examined for conserved genes near that one tagged protein. This protein is found adjacent to at various classes of repetitive or low-complexity YSIRK proteins (whether unique in genome or not), in a range of species (Enterococcus faecalis X98, Ruminococcus torques, Coprobacillus sp. D7, Lysinibacillus fusiformis ZC1, Streptococcus equi subsp. equi 4047, etc). The affliated YSIRK proteins include Streptococcal protective antigen (see ) and proteins with the Rib/alpha/Esp surface antigen repeat (see TIGR02331). The last quarter of this protein has an AraC family helix-turn-helix (HTH)transcriptional regulator domain.	8.93349e-33
NZ_CP009287.1\|WP_025706416.1\|2056791_2057196_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	2.33578e-12

>NZ_CP009287.1|WP_042266371.1|2064244_2064634_-|hypothetical-protein
MGIGIIFIVVFVYIVAKAILRDNNKRGTSGRSRNDSADSFFFTGNGADLTPGDSQKHHSGHPHHDGNNGNGSHNNHSHGGSSWGSGHGNHGGWDGGGHSGGHSGGHDSGGFGGGDSGGGGGDGGGGGGD
>NZ_CP009287.1|WP_025707578.1|2061208_2064034_+|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein
METATFPFEQIELQLNERVQDLLSRLTLDEKVSLMPQYQAAIERLGVGGYKHGTEGAHGISWLGAATSFPQPGGLACTWNPELVQKIGEAIGDEARAFYRKNPTVNGLTLWAPTVDMERDPRWGRTEEAYGEDPVLTGRLSTALVKGIQGDHPKYLKAVATLKHFLGNNNEIDRGVASSSIDPRNMREYYLEAFKPAFKEGGAQSMMTAYNSVNGVPVILHPAVMEIVKGEWEMDGFIVSDAGDLFGIVKDHKYYESFARSMAESIKNGIDSVTEETEETIKVIHQALNEGLLTEGDLDRALFNTFRVRFRLGEFDPEEGNPYAAIDDSVILSPEHSKLSLEAAKQSIVLLKNDNAALPLRSKELSKAAVIGPLADEAFRDWYSGTLAYGVTPLQGVTKKLAGKQVVFESGDDRIILTSAASGKAVGMTGEEGRLAVLHDVPERGELFRHTAWGWTAHTLEATSRGQYVTLNDAGTLTASADEIYGWYVKESLNLVPEEGGAVSLRTWNDKLISIREKDGTLHVGEQDASTEAHTFHKKIVVNGVEAAVQAAKAAEVAVVFVGNHPLLNGKEEIDRPDIVLPEEQERLVKAVYEANPNTVVVIVGSYPISSTWIDENIPAVLYTSHSGQELGNAVADVLFGDYSPSGKLNMTWYRSVDQLPGLMDYDIIKGKRTYMYFDGEPLYPFGHGLTYAQVAYRNLSLAEHELQPDGIINLSVEVKNTGAVESDEVVQLYIHALSSRVQRPLKQLMGFEKIHLAAGQMHTVAFTLPVAGLAFWDVTREQYCVESGDYEVIIGRSSGDIQLTGRVYVQGDTVPPRNLYATVKAENYDDYEKVYLDECKAGGASIHPAADGAWIAFKDADFAQGAVEFQGLVSSATGGSLEIRTGGRTGKLAGTLEIPAGSATQEWKSLSVLVGIEAGNTDVYLIFSGEVLLSRFHFSA
>NZ_CP009287.1|WP_156124055.1|2060394_2061171_+|hypothetical-protein
MERTTAETPLLGRLRPGSRETTAEMPLLKRLRPGSRETTAETPLLGRLWAGSRETTAEMPLLKRLRPGNPETTAETPLLKRPRPGNPETTAEMPLLKRLRPGNPETTAEMPLLGRLRPGSRETTAEMPLLKRPRPGSRETTAEMPLLKRPRPGSRETTAEMPLLKRPRPGNPETTAEMPLLKRPRPGNPETTAEMPLLGRLRPGNPETTAEMPLLGRLPILDSGPAQLPARISNFELIFLSIVQVLLPAEIFYDRKDR
>NZ_CP009287.1|WP_025706413.1|2059698_2060373_+|hypothetical-protein
MGFQEAYSTWIKYHIGRRKGERRDRLERGHGHGERMFLEQVWWPLMGSLQNLHPEYEVADWRGRPYYVDLVWKPGQVKFAFEVKGYGPHVQNMDRTRYRQELNRETFLQIAGYRVVSIPYDDLEGSPQLTISLIRSLVAPFIGGINAVGQFTRLEREMIRLAVSRDGMIRPVDLGKELGINLRTVRNTLQALCAKGRLRPVPTKSGSRVYRYEVIYSFSDDQLW
>NZ_CP009287.1|WP_025706414.1|2058564_2059446_+|helix-turn-helix-transcriptional-regulator
MDLRLHACAYSFHTLPFKTSFTPPPFFLFRLQVLGSCRALVHGKMRLIEPGDLLIYPPGELYHLEVEAIDGKIESGDYYLLCEGSWIEQWWKARPRKIQQRIHLDGGMLSLWQQLSIEQHRIVQVNPELIRHLLCALCLSLDRLAEESGSRQDLQVRSNELVLLMQRYINEHALRPLRVEEVAAAAGLSVSRAVHLFKKLTGYTIIHYTQEIRLSNALERIRYTDLGLENIAGSCGFGTYSYFHKVFKARYGLSPKEVRDRPPHSILEGTYVITSGDQNVTGLSPDARRFLTT
>NZ_CP009287.1|WP_025706415.1|2057211_2058429_-|sugar-efflux-transporter
MMTRTRNLFRIPSYPVFLICMMLQGMAISISSPFLAVYFTTKLGVSAGIFGVFTAVTIITGVWLSMWIAKRSDSGLNRKKLMVTAMFFNALAFAGYLLIHEFYGLLLYMAVFTALGAPAMPQLFASAREAVNASKSADHAFANSTLRSMFSLGFIAGPLAGSVLIHYFGFPGIFMSTVLIFLMNALLVVIFVKAPAAPPQTAGSKQQQPVKLHQNRRVLVPFLVLTLLYSGHWINNLNISLFITDTLGGNTQNVASVSSICALLEIPLMLVLGLLSAKYSARLLMVWGIVLGAAYYIVVLASTSLWMIIAGQVLLAFFVAVISAIGISYIQDLLPDLPGYASTLYTNSTTIGRLFGSLAGGAAAQWFGYRNAYWVCLLLGMVSLALLALPRRSAAEEATRSASIT
>NZ_CP009287.1|WP_025706416.1|2056791_2057196_-|response-regulator-transcription-factor
MKILLVDDKPQMRSELKLLLETLPFTYEAVLEAACDTGAIRLIERHNPDIIVTDAKLLISEASALERVNASQTHGTIIVTSSYEFVLDAFCKGGMATLLKPVAKEELKYAVLRAASGMRRECLYGGQPGAVPAR
>NZ_CP009287.1|WP_025706418.1|2055609_2056404_+|SDR-family-oxidoreductase
MAITYKDPAHEFEGKRVLVTGGTRGMGEAIAKRLAGSGATVLTTARTMPADLREPGLFVQADIATPEGVGRVIHGVKEVLGGIDILVNNVGGSSTPPGGALVLTDEDWVQALNWNLLAAVRLDRGLLPLMLEQGSGAIVHISSIQRRLPLYETTLAYAAAKAALSNYSKGLSNEFSPRGIRINTVAPGFIQTKAAEAMIDRIAQAAGSREAALQQLMDSLGGIPLGRPGLPEEVGELVAFLVSDRAASITGSEYVIDGGTIPTV
>NZ_CP009287.1|WP_025706419.1|2055288_2055594_+|DUF1330-domain-containing-protein
MSAYVIFIREHSHDPEELRIYSQKAPGGLAGHPVTPLAVYGTHEVIEGPAIEGAAILEFPSIEAAKVWYYSPAYQDAVQHRLRGGTYRGIIVEGVSAAASE
>NZ_CP009287.1|WP_025706420.1|2054251_2055136_-|LysR-family-transcriptional-regulator
MELTQLEYFITVAKLQHMTKAAKALNLTQPALSHAISKLEEELGLPLFDRGGRNIRLNRYGVQFAKRVEGALRSIEGGIQEIREWSDPDTGLISISYLNILGVDLVPNLVQEYMQEHPKVRFELFQGNLGDLDEHFELGSSDLMITSRESPVMKHEWLTIQKVPLYIVVPARHPFARQSSLSLTKLSGEPFVGLKKNCGLKATITARFENTGFQLASTYDAEDLVTVAGFIRAGLGVSVLPQTPGLMLEGLAWIPIAEEGWEWEIGLKWRKDRYLPAAAKAFIDCMEQQQVHPV
>NZ_CP009287.1|WP_042266373.1|2065033_2066308_-|helix-turn-helix-domain-containing-protein
MLEHLEDHERIPYICRLLYEAYRLPVTWLNPKGETVQALHPFGHTRPPVEGIQGLPAEVLERIQAAAGSRNDSRTAAFPRICTTAYLENFIILPLCGELEQSGAVVIGPSLYAPLTEENAGTLLRDHNTPPGEQEAWLQYYRRLPALDRMRLCHAAILLYTLATGRTLSVSELLLDSTLLQPAQLRDSTPDLNLSYRRENTWLHHDPSQERELFRHIRNGDKSGLLQTHASFNEDQYGLLSRKSQLRSKKNLAISSITLATRAAIDGGLFWEIAYTLSDFHIQHIEELQDIPAVDRAQLAALCEFADHVKDNRRSKLSRTSALCQNYIFNHLYEELTLSKLAGVAGLNASYLSQLFKKETGLAVSEYIQRERIEEAKRLMEWPGISLSDIATRLHFNDQSYFTKVFKKYTGITPREFRHDRGIT
>NZ_CP009287.1|WP_042266375.1|2066421_2068689_+|glycoside-hydrolase-family-3-C-terminal-domain-containing-protein
MTIDIRHLISQLTLEEKAALCSGLDFWHTQGVERLGIPSVMMTDGPHGLRKQAESADHLGLHNSVPATCFPSAAGLASSWNRQLIRRVGEALGRECQAEDVAVLLGPGTNIKRSPLNGRNFEYFSEDPYLSSEMAASHIQGVQSQGVGTSLKHFAANNQEHRRMSTDAVIDERTLREIYLASFEGAVKQAQPWSVMCSYNRVNGEYASESETLLTRILRDEWGFEGFVVSDWGAVNERVKALQAGLELEMPSSGGIGGAKIIAAVNSGELSMETLDLAVERLLSFIYKRVENRQENLSFEPGEHHLLAREVARESMVLLKNEGSLLPLAPQGTLAIIGEFAKKPRYQGGGSSHVNPTKLDDAFAELQAVAGEATSFLYAQGYELGSDEVNEDLLREARDTAAKSDAAVLFLGLPDRYESEGYDRSHLSLPASHIALIGAVAQVQENIIVVLSNGSPVEMPWIGKTKAVLEGYLGGQAFGGAVADLLFGVVSPSGKLAETFPVKLSDNPSFLNFPGEGDKVEYKEGVFVGYRYYDKKEMEPLFPFGFGLSYTEFEYSGLVLDKTSIRDTDTVQVTVTVKNTGSRTGQEIVQLYVGDVESSVIRPLQELKGFQKVELQPGEARGVSFTLDKRAFAYYNVQLGEWHVESGAFRIGVGASSRDIRLSASLEVASTTEIPVSFHRNSTVGDLLDNPLTAERAKKFSSIFGLESAMEDNPEMFVAMMKYMPLRAMIGFGQGKYTEEDLAQDLRELNALAAK
>NZ_CP009287.1|WP_042267928.1|2068994_2070350_+|glycoside-hydrolase-family-30-protein
MTDINLKWYSSTEQAPWTERQVPEARVPGTEEAAPANLTVTDDSYQTLEGFGGCFNELGYAALGQLPDDERARVMYDLFHPEGEQRFSICRLPIGASDYALDWYSLNETDGDYAMEHFSIERDRQLLIPYIKEALALNPELQLFASPWSPPTWMKFPKAYNYGTLRWEPEILAAYALYFVKFVEAYRAEGITIHQVHVQNEVVADQKFPSCVWTGEQLKIFIRDYLGPAFEQHGLDTEIWLGTINAPEPWDEWLKKKSSDHDAFAGVVLGDPEAYKYVKGVGYQWAGKHAIQRTVQSYPELRYMQTENECGDGENTWFYAKYIFGMYQHYFMNGVNAYIYWNMALAPKGRSTWGWEQNSMLTIDPASRQAILNPEYFVMKHFTRYAVPGSVRVGLRGPWSGHAVAFRTPEGRLTLVIANPYMEARMLHLRSGSSLYSFELEAESFHTLVLG
>NZ_CP009287.1|WP_025703403.1|2070578_2072336_+|sensor-histidine-kinase
MLAKWMMKLSGPFRRSIRNKLILTMIGLAVVPIVAITALAAENTRRSMEAEVISTNLSNMKWTGVYLGDQFAQLNNLIYTVLISPHLSDYLANAEEASLSSQFTAQRNITDTLTNLFYSAGNHVVGVELYLKEYNKLFTINASQSNIESPAAIPAPYKLLFDQNKDFMITTDSTDGTKFQLIRSINRFENQEKLGGISLQIRWGVLDQTLDLLGRGNEHTVFIAGADGRVLYQPWGSAPAAVTLHRIAGTSETQGYFRSDHEYVFYNTIDPVGLKLVTVIPNSFINKSALATMNFGLIIGAVSVVVAILLAVILAWRLATPIVSLARSIQGFGMMKEREVRLSNRVDEIGLLETKLDQMSHRIREHIRTEYLISLEKKSAELKALQAQINPHFLQNTLQMIGSMLFKNSPAESYGVIRSLSDMFRYIIREPEDLAPLRAELNHLNNYMQIQQQRFAVRLNYSLEVDEETLGSFIPKLSLQPIVENAFFHGLEPQEGPWELEVQVARAGEDTVITIRDNGVGIEPDRLAELQGRLTRRSGELWTHGERIGLSNVASRIHLHFGDSYGIRVESTERQGTTVTVTIPL
>NZ_CP009287.1|WP_025703402.1|2072623_2073709_+|response-regulator
MIKVLLVDDESWNRDIVRTFGAWAELGMEIAGEAEDGREALRLISELSPHIVITDMRMPGADGVMLMNNLHERNPEIKVIVVSGYDDFKYARNALRYGAVDYLLKPIDPKELNAVLDKCRRELEEAGRGQSIYALDIDVSLWLSSYKQRMRVHFNELNAEGVNSVLQGIGRELEHEGVKGPGVFRQAASEMLLLLKELIRGNGLEEDLLKAEIPHTALASAESVSAYLTELYEASLEQLIGQRKFKNKLNLEEVRLYIDGHFAEAVTLDGLARAFFVSKEYLSKVFKQEYGCNVTDYILGLRMDKAREWLADENIPIKTVAELAGYEDVGYFYRVFKKHFGVAPGEMRKQKSGLKMSNPEG
>NZ_CP009287.1|WP_025703401.1|2073788_2075102_+|extracellular-solute-binding-protein
MKKMSQGLLVTFLAAALLAGCGSNNGGNAGNAAGDDASTGSGSASAKSVTLKMFIAQPRFKEQYDNYIAEFVKKEKADKNIDVSVQLEMPTADNASQILKTRLASNDAPDIFAIHAVNEIPSYYKAGYLEDLTSQPFVGKLLDSVKPSVTTTDGKVVALPLETLSWGYLYNKKIFSEQGLTPPTTLTEMKTVIGKLKANNVTPFVLSYKESWIPQLVLPLAVGGMMKTEDPEFVNKMNKDEGSFSEMKSAIFDVFDLINENGTAKATEVGGDDGAAAFAAGKGAMWLMGPWYAETILKSNPDLDFGVAPLPINDNPEATLINLSASTSLAVSPTSKNKEVALDFLNYVLDDQASNGLFQAMKFNPVSTVHTYESYPWITEATTYVKAGKSVQDPAIPQSVKDEVGKGLQAYYAGQMSQDDVLKALDKAWKSYNKVNK
>NZ_CP009287.1|WP_025703400.1|2075201_2076086_+|sugar-ABC-transporter-permease
MPVKSYKHIVSLLAFVAPAFIIYLLFLLIPTIGGMYYSFTDWNGLNRNYSFIGLGNFIEALREDPDFVHSLMFTLKYVLFMIVLQNVFALVLAVFIETKTRTKGFFRTLFFMPNMISTIISAFMWTFVFSQVLPQIAEKTAMSFLDQLWIGDPKVSFYSIIIVSLWNGVGYMMIIYLAALQGVPQSLKEAAVIDGASPFQTFRKVTLPMITHAVTICFFLTLNGAFKVFEVVYGLTGGGPGRSTQVITMNIYEEAFSNNFRYGYASAKSVILFVIILIFTFIQIGVMKRKEVEA
>NZ_CP009287.1|WP_025703399.1|2076082_2076910_+|carbohydrate-ABC-transporter-permease
MRLRKGASLFITLFLSIGAVISFFPIYLAIINSVKTQGEMFTSFIALPTKLHFENYSQAFDKINLLHSTLNSVIVSVIGIGGIIFCAALAGYKLSRTSGRLSAAIFSLFIASMLVPFHSIMIPLTRMAKSLHVSGSTYGLALIYIGLGVNMAIFLYHGFVKSIPRELEEAARIDGCGEFQTFFRIIFPLLLPITVTIAILDFLWIWNDFLLPLLMLTDANKYTLILSTNTLFGEYNKEWSLILAALVLTALPVIVIYGFFQKFIMQGIAEGAIKG
>NZ_CP009287.1|WP_025703398.1|2077128_2079129_+|beta-galactosidase
MNQLRYGVAYYDEYMPCERLDEDIAMMKAAGINTVRIAESTWSTHEPQNGVFDFTSVDRVLDAMHAAGIAVIVGTPTYAVPAWLVKEHPGVLAVTPKGPGKYGARQIMDITSPAYLFHAERIIRKLISRVCKHPAVIGYQTDNETKHYETAGDNVQLLFVKYMREKFGTLEEVNRRFGLDYWSNRINSWEDFPSVVGTINGSLGAEFARFQRGLVTDFLAWQAALVNEYKQPGQFVTQNFDFEWRGYSYGVQPSVDHFAAAEAFDIAGVDIYHPSQHELTGTEIAFGGDMARSLKRSNYLVLETQAQAFPHWTPYPGQLRLQAFSHLASGANMVAYWHWHSIHNSFETYWKGLLSHDFKPNPVYNEAITIGRDFARLSGSLFGLHKKNKVAVMVSNEALSAMEWFKLPDGKNYNDVVRWLYDGLYRMNIECDFIQPGYAGLSEYSLIIVPALYAVSDEALERLNEYVRQGGHAVYSFKSGFADETVKVRTTVQPGIISEACGIGYSLFVTPHEVSLKSENAAVCAGDNRVEAWMELITPTTAEVLLRYDHPHWGQYAAVTRNRYGQGSATYIGCMTSPELAGSILRAAVQEAGLWGADQELAFPLIVKTGINPQNQTVRYYFNYSDSPQSLVYPHGPAEELLSGREFAPGEELELAPWGAAILLEH
>NZ_CP009287.1|WP_025703397.1|2079669_2080014_+|multidrug-resistance-protein-SMR
MKNNSAWFKIAGAACLEVVWVIGLKHASVPWEWLITGLALLVSFYTIIVASRKLPVGTVYSVFVGLGTAGTVLADMLWFGEPFRWIKLVLILVLLAGVIGLKLVTGNSHTKEVS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_15

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_15

2329729-2329853

Orphan

Consensus_repeat	Method
GCAAGATGCACAGGAACTTCCGGGTAAGCTGCCTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_15

>merge|NZ_CP009287|15|2329729-2329853|CRISPRCasFinder
GCAAGATGCACAGGAACTTCCGGGTAAGCTGCCTGGCGCCGCCGCACTTTTCCCCACGATAGCTGCTAAGATCCATCAGGTGACAGGCGTGCAAGAAGCACAGGAACTTCCGGGTAAGCTGCCTG

>NZ_CP009287|15|12|2329729-2329853|CRISPRCasFinder
GCAAGATGCACAGGAACTTCCGGGTAAGCTGCCTG	GCGCCGCCGCACTTTTCCCCACGATAGCTGCTAAGATCCATCAGGTGACAGGCGT
GCAAGAAGCACAGGAACTTCCGGGTAAGCTGCCTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_081954789.1\|2326152_2326974_+\|precorrin-2-C(20)-methyltransferase	unknown	unknown	gnl\|CDD\|381172
NZ_CP009287.1\|WP_174469023.1\|2318205_2319090_+\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|213192
NZ_CP009287.1\|WP_025705585.1\|2334667_2335603_-\|magnesium/cobalt-transporter-CorA	unknown	unknown	gnl\|CDD\|213356
NZ_CP009287.1\|WP_025705579.1\|2344953_2345796_+\|SPFH-domain-containing-protein	unknown	unknown	gnl\|CDD\|259800
NZ_CP009287.1\|WP_025707646.1\|2322563_2323238_+\|precorrin-8X-methylmutase	unknown	unknown	gnl\|CDD\|376825
NZ_CP009287.1\|WP_025705580.1\|2344608_2344791_-\|transcriptional-regulator	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704907.1\|2332539_2333559_+\|HRDC-domain-containing-protein	unknown	unknown	gnl\|CDD\|366173
NZ_CP009287.1\|WP_025705497.1\|2326970_2327774_+\|precorrin-4-C(11)-methyltransferase	unknown	unknown	gnl\|CDD\|381168
NZ_CP009287.1\|WP_025705581.1\|2340124_2344507_+\|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase	unknown	unknown	gnl\|CDD\|236505
NZ_CP009287.1\|WP_025707645.1\|2323289_2324600_+\|cobalt-precorrin-5B-(C(1))-methyltransferase	unknown	unknown	gnl\|CDD\|234615
NZ_CP009287.1\|WP_025705584.1\|2336257_2337187_+\|homoserine-O-succinyltransferase	unknown	unknown	gnl\|CDD\|235433
NZ_CP009287.1\|WP_042266461.1\|2327766_2328882_+\|cobalamin-biosynthesis-protein	unknown	unknown	gnl\|CDD\|235610
NZ_CP009287.1\|WP_025705583.1\|2337224_2338424_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|181320
NZ_CP009287.1\|WP_025705582.1\|2338704_2339841_+\|dehypoxanthine-futalosine-cyclase	unknown	unknown	gnl\|CDD\|274731
NZ_CP009287.1\|WP_025707644.1\|2324592_2325822_+\|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase	unknown	unknown	gnl\|CDD\|381171
NZ_CP009287.1\|WP_052415706.1\|2319246_2321778_+\|precorrin-3B-C(17)-methyltransferase	unknown	unknown	gnl\|CDD\|381173
NZ_CP009287.1\|WP_042266463.1\|2333652_2334597_+\|1-phosphofructokinase-family-hexose-kinase	unknown	unknown	gnl\|CDD\|238570
NZ_CP009287.1\|WP_042266458.1\|2317351_2318140_+\|cobalt-ECF-transporter-T-component-CbiQ	unknown	unknown	gnl\|CDD\|274139
NZ_CP009287.1\|WP_025704908.1\|2331298_2332180_+\|ROK-family-protein	unknown	unknown	gnl\|CDD\|366120
NZ_CP009287.1\|WP_042266459.1\|2321774_2322554_+\|precorrin-6A-reductase	unknown	unknown	gnl\|CDD\|376826

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_081954789.1\|2326152_2326974_+\|precorrin-2-C(20)-methyltransferase	gnl\|CDD\|381172	cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL. Precorrin-2 C20-methyltransferase (also known as S-adenosyl-L-methionine--precorrin-2 methyltransferase) participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. Precorrin-2 C20-methyltransferase catalyzes methylation at the C-20 position of a cyclic tetrapyrrole ring of precorrin-2 using S-adenosylmethionine as a methyl group source to produce precorrin-3A. In the anaerobic pathway, cobalt is inserted into precorrin-2 by CbiK to generate cobalt-precorrin-2, which is the substrate for CbiL, a C20 methyltransferase. In Clostridium difficile, CbiK and CbiL are fused into a bifunctional enzyme. In the aerobic pathway, the precorrin-2 C20-methyltransferase is named CobI. This family includes CbiL and CobI precorrin-2 C20-methyltransferases, both as stand-alone enzymes and when CbiL forms part of a bifunctional enzyme.	2.6725e-96
NZ_CP009287.1\|WP_174469023.1\|2318205_2319090_+\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|213192	cd03225, ABC_cobalt_CbiO_domain1, First domain of the ATP-binding cassette component of cobalt transport system. Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.	8.59453e-91
NZ_CP009287.1\|WP_025705585.1\|2334667_2335603_-\|magnesium/cobalt-transporter-CorA	gnl\|CDD\|213356	cd12822, TmCorA-like, Thermotoga maritima CorA-like family. This family belongs to the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. Members of the Thermotoga maritima CorA_like family are found in all three kingdoms of life. It is a functionally diverse family, in addition to the CorA Co2+ transporter from the hyperthermophilic Thermotoga maritima, it includes three Saccharomyces cerevisiae members: two plasma membrane proteins, the Mg2+ transporter Alr1p/Swc3p and the putative Mg2+ transporter, Alr2p, and the vacuole membrane protein Mnr2p, a putative Mg2+ transporter. Thermotoga maritima CorA forms funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport by Alr1p. Natural variants in this signature sequence may be associated with the transport of different divalent cations. The functional diversity of the MIT superfamily may also be due to minor structural differences regulating gating, substrate selection, and transport.	2.11332e-108
NZ_CP009287.1\|WP_025707646.1\|2322563_2323238_+\|precorrin-8X-methylmutase	gnl\|CDD\|376825	pfam02570, CbiC, Precorrin-8X methylmutase. This is a family Precorrin-8X methylmutases also known as Precorrin isomerase, CbiC/CobH, EC:5.4.1.2. This enzyme catalyzes the reaction: Precorrin-8X <=> hydrogenobyrinate. This enzyme is part of the Cobalamin (vitamin B12) biosynthetic pathway and catalyzes a methyl rearrangement.	9.48952e-98
NZ_CP009287.1\|WP_025705579.1\|2344953_2345796_+\|SPFH-domain-containing-protein	gnl\|CDD\|259800	cd03402, SPFH_like_u2, Uncharacterized family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model summarizes an uncharacterized family of proteins similar to stomatin, prohibitin, flotillin, HflK/C (SPFH) and podocin. The conserved domain common to the SPFH superfamily has also been referred to as the Band 7 domain. Many superfamily members are associated with lipid rafts. Individual proteins of the SPFH superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. Microdomains formed from flotillin proteins may in addition be dynamic units with their own regulatory functions. Flotillins have been implicated in signal transduction, vesicle trafficking, cytoskeleton rearrangement and are known to interact with a variety of proteins. Stomatin interacts with and regulates members of the degenerin/epithelia Na+ channel family in mechanosensory cells of Caenorhabditis elegans and vertebrate neurons and participates in trafficking of Glut1 glucose transporters. Prohibitin may act as a chaperone for the stabilization of mitochondrial proteins. Prokaryotic HflK/C plays a role in the decision between lysogenic and lytic cycle growth during lambda phage infection. Flotillins have been implicated in the progression of prion disease, in the pathogenesis of neurodegenerative diseases such as Parkinson's and Alzheimer's disease, and in cancer invasion and metastasis. Mutations in the podocin gene give rise to autosomal recessive steroid resistant nephritic syndrome.	3.5077e-127
NZ_CP009287.1\|WP_025704907.1\|2332539_2333559_+\|HRDC-domain-containing-protein	gnl\|CDD\|366173	pfam00570, HRDC, HRDC domain. The HRDC (Helicase and RNase D C-terminal) domain has a putative role in nucleic acid binding. Mutations in the HRDC domain cause human disease. It is interesting to note that the RecQ helicase in Deinococcus radiodurans has three tandem HRDC domains.	7.7134e-17
NZ_CP009287.1\|WP_025705497.1\|2326970_2327774_+\|precorrin-4-C(11)-methyltransferase	gnl\|CDD\|381168	cd11641, Precorrin-4_C11-MT, Precorrin-4 C11-methyltransferase (CbiF/CobM). Precorrin-4 C11-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. In the aerobic pathway, CobM catalyzes the methylation of precorrin-4 at C-11 to yield precorrin-5. In the anaerobic pathway, CibF catalyzes the methylation of cobalt-precorrin-4 to cobalt-precorrin-5. Both CibF and CobM, which are homologous, are included in this model. There are about 30 enzymes involved in vitamin B12 synthetic pathway. The enzymes involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Most of the enzymes are shared in both pathways and several of these enzymes are pathway-specific.	9.48638e-129
NZ_CP009287.1\|WP_025705581.1\|2340124_2344507_+\|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase	gnl\|CDD\|236505	PRK09419, PRK09419, multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase/5'-nucleotidase.	0
NZ_CP009287.1\|WP_025707645.1\|2323289_2324600_+\|cobalt-precorrin-5B-(C(1))-methyltransferase	gnl\|CDD\|234615	PRK00075, cbiD, cobalt-precorrin-6A synthase; Reviewed.	3.84683e-154
NZ_CP009287.1\|WP_025705584.1\|2336257_2337187_+\|homoserine-O-succinyltransferase	gnl\|CDD\|235433	PRK05368, PRK05368, homoserine O-succinyltransferase; Provisional.	0
NZ_CP009287.1\|WP_042266461.1\|2327766_2328882_+\|cobalamin-biosynthesis-protein	gnl\|CDD\|235610	PRK05788, PRK05788, cobalt-precorrin 5A hydrolase.	7.73294e-81
NZ_CP009287.1\|WP_025705583.1\|2337224_2338424_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|181320	PRK08247, PRK08247, methionine biosynthesis PLP-dependent protein.	0
NZ_CP009287.1\|WP_025705582.1\|2338704_2339841_+\|dehypoxanthine-futalosine-cyclase	gnl\|CDD\|274731	TIGR03699, menaquin_MqnC, dehypoxanthine futalosine cyclase. members of this protein family are involved in menaquinone biosynthesis by an alternate pathway via futalosine. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone].	0
NZ_CP009287.1\|WP_025707644.1\|2324592_2325822_+\|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase	gnl\|CDD\|381171	cd11644, Precorrin-6Y-MT, Precorrin-6Y methyltransferase (also named CbiE). CbiE (precorrin-6Y methyltransferase, also known as cobalt-precorrin-7 C(5)-methyltransferase, also known as cobalt-precorrin-6Y C(5)-methyltransferase) catalyzes the methylation of C-5 in cobalt-precorrin-7 to form cobalt-precorrin-8. It participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways in bacteria. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. CbiE functions in the anaerobic pathway, it is a subunit of precorrin-6Y C5,15-methyltransferase, a bifunctional enzyme: cobalt-precorrin-7 C(5)-methyltransferase (CbiE)/cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) (CbiT), that catalyzes two methylations (at C-5 and C-15) in precorrin-6Y, as well as the decarboxylation of the acetate side chain located in ring C, in order to generate precorrin-8X. CbiE and CbiT can be found fused (CbiET, also called CobL), or on separate protein chains (CbiE and CbiT). In the aerobic pathway, a single enzyme called CobL catalyzes the methylations at C-5 and C-15, and the decarboxylation of the C-12 acetate side chain of precorrin-6B.	9.30372e-74
NZ_CP009287.1\|WP_052415706.1\|2319246_2321778_+\|precorrin-3B-C(17)-methyltransferase	gnl\|CDD\|381173	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH). Precorrin-3B C(17)-methyltransferase participates in the pathway toward the biosynthesis of cobalamin (vitamin B12). There are two distinct cobalamin biosynthetic pathways. The aerobic pathway requires oxygen, and cobalt is inserted late in the pathway; the anaerobic pathway does not require oxygen, and cobalt insertion is the first committed step towards cobalamin synthesis. This model includes CobJ of the aerobic pathway and CbiH of the anaerobic pathway, both as stand-alone enzymes and when CobJ or CbiH form part of bifunctional enzymes, such as in Mycobacterium tuberculosis CobIJ where CobJ fuses with a precorrin-2 C(20)-methyltransferase domain, or Bacillus megaterium CbiH60, where CbiH is fused to a nitrite and sulfite reductase-like domain. In the aerobic pathway, once CobG has generated precorrin-3b, CobJ catalyzes the methylation of precorrin-3b at C-17 to form precorrin-4 (the extruded methylated C-20 fragment is left attached as an acyl group at C-1). In the corresponding anaerobic pathway, CbiH carries out this ring contraction, using cobalt-precorrin-3b as a substrate to generate a tetramethylated delta-lactone.	7.14016e-139
NZ_CP009287.1\|WP_042266463.1\|2333652_2334597_+\|1-phosphofructokinase-family-hexose-kinase	gnl\|CDD\|238570	cd01164, FruK_PfkB_like, 1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.	2.34371e-108
NZ_CP009287.1\|WP_042266458.1\|2317351_2318140_+\|cobalt-ECF-transporter-T-component-CbiQ	gnl\|CDD\|274139	TIGR02454, Uncharacterized_protein_MJ1089, cobalt ECF transporter T component CbiQ. This model represents the CbiQ component of the cobalt-specific ECF-type. CbiQ is now recognized as the T component of energy-coupling factor (ECF)-type transporters. The S component confers specificity (CbiM-N for cobalt systems), which CbiO is the ABC-family ATPase. In general, proteins found by this model reside next to the other putative subunits of the complex, identified as CbiN, CbiO, or CbiM. Note that the designation of cobalt transporter has been spread excessively among ECF system transporters with many other specificities. [Transport and binding proteins, Cations and iron carrying compounds].	1.80428e-26
NZ_CP009287.1\|WP_025704908.1\|2331298_2332180_+\|ROK-family-protein	gnl\|CDD\|366120	pfam00480, ROK, ROK family.	6.60357e-76
NZ_CP009287.1\|WP_042266459.1\|2321774_2322554_+\|precorrin-6A-reductase	gnl\|CDD\|376826	pfam02571, CbiJ, Precorrin-6x reductase CbiJ/CobK. This family consists of Precorrin-6x reductase EC:1.3.1.54. This enzyme catalyzes the reaction: precorrin-6Y + NADP(+) <=> precorrin-6X + NADPH. CbiJ and CobK both catalyze the reduction of macocycle in the colbalmin biosynthesis pathway.	1.3458e-95

>NZ_CP009287.1|WP_042266461.1|2327766_2328882_+|cobalamin-biosynthesis-protein
MAKRYAAVAITVNGIRLALKLGERLADTEVFYYAKYSENVQDNAGIGRAFAEPVKALLPKLFRQYEGLILFFSLGAAVRLIAPLLEDKRTDPAVIVIDERGEHVVSMLSGHLGGANRLTRQVAQLLDSHPVITTASDVQGTFAVDLLGSEFGWRAESFAAMKTVSAALVNGEAVAFLQESGERGWLPPGAVLPEHVRLCGSMAELQEAPFSAAVVITDRQLPEPEAAALGERTVVYHPRSLVLGLGCNRGTPLEELEAVVQGTLAELGLSLLSVRNAATAAVKGDEAGLLALCAKYGWELALFSPEELNMVALEQPSEIVFKATGAYGVCEPAALLSSGARDLVLKKKKSGNATIAIARVSFAETEGNKNE
>NZ_CP009287.1|WP_025705497.1|2326970_2327774_+|precorrin-4-C(11)-methyltransferase
MTAASLEPKVYIVGAGPGDPELITVKGSRILRSADVVLYADSLVSGELIASVMPGAEVLQSSGMDLEQQVEIMAAAVKAGKSVARIHTGDPSMYGAILEQMSLLKLCGVSYEIVPGVSSVFASAAALGAELTVPELTQTVILTRAEGRTPVPEREQLRQLAAHHCTVALFLSASLAEHAAAEFLAAGWSPDTPIAVVKRATWPDQQILRTTVARLAADLREAGITMHAMILAGWALDPALTDRDQYRSKLYDKTFTHGCREGIGADG
>NZ_CP009287.1|WP_081954789.1|2326152_2326974_+|precorrin-2-C(20)-methyltransferase
MDEQAAHEERITEAARQTAVAAYHADDEYPLVETELAPIGTGTLYGVGVGPGDPELITLKACRLLRECPVIAYPATKKGGKSYAHEIVEMHIKADEKVMLGLVFPMTRDPELLASGWNRTAELCWNELKQGRDVAFVTEGDPNLYSTFIHLARLMQELHPGVPIVSIPGISSVLGAAAALQQPLADGDQRVGIIPATEDRAALEEALLHHDTVVFLKVAKVLDLLLDVLDELGLAGKASVVTKVTSPNETVWRDARELRGQELEYLSLMVVSK
>NZ_CP009287.1|WP_025707644.1|2324592_2325822_+|bifunctional-cobalt-precorrin-7-(C(5))-methyltransferase/cobalt-precorrin-6B-(C(15))-methyltransferase
MADIIYIIGIGEDGAGGLTPDSLSKVQRSEVLLGGERQLSFFSEYHGEKIVLKNGLKAFADKLEEVWKERRTVVLASGDPLFFGIAGYLVRRFGPEHVEVIPHYSSVQLAFARLGDSWQDAELVSLHGRPIRGLAQRIDGKHKIALLTDETNTPAVIGAYLREFGMTEYEAFVCERLGGGEEVCRFWELEEMEKGTFAPLNVVILRWKPGSGTAAVRRGFAYPDEAFRQRRPEKGLITKREVRALVLSELNLSEEAVVWDIGSGSGAVAAECARIARLGKVYAIEKSAENLPNMEANRREFRADFEVIHGKAPQGLERLPDPDAVFIGGSGGGLRHIIEHCSQRLRPEGRIVIGAITIETLYTGLEALKLAGMATEVTQLQASRGKPILGMTRFEGMNPVYVVSGRRQG
>NZ_CP009287.1|WP_025707645.1|2323289_2324600_+|cobalt-precorrin-5B-(C(1))-methyltransferase
MQQRKSQGVQDDKRSGDLQLGQKGQAAAEQRGSRAVREQRGSRAVPEQRGSQTVAAQRESQPAGELRGSQPADGCPAGPLRRGYTTGACAAAAAKGAALLLITGEAPPSVEIDLPAGFRHAFMLAGGQRSGRDSAVCATVKDAGDDPDATHQARIEAAVSWRDSPGVEIDGGKGVGRVTKPGLPVAVGEAAINPVPRRMIEEAVSGVLEEHGAARGMRVVISVPEGEAIALKTLNPRLGILGGISILGTRGVVTPFSTEAYKASVVQAISVAAAMGNRQIILTTGGSSEKYAMAMFAELPEEAFIQMGEYVGFSLEHAKAFGIHKITLAGMAGKFSKVAQGAMLIHSKNAPVDFGFLAKIAAESGADNGLVEEIAAANTASQVADLMTAAGNDGFFEQLCLHACRQCLKHMNGGMTVEMVLMTMKGRVLGRAEIRG
>NZ_CP009287.1|WP_025707646.1|2322563_2323238_+|precorrin-8X-methylmutase
MEFGTDFKPLTVQPQEIESLSFQMITRELGGHAFNALQYPVVQRIIHASADFELGRSLVFHPRAMEAGITAILEGRPIIADVRMVEAGIAKERIHKYGGEVRVHISDPDVVEAAKAQGTTRAILATRKACAEAPGGIYVIGNAPTALLELIRLVKEGAAQPGLIIGMPVGFVSAAESKEELRKLDIPYITNIGRKGGSTVVVAAVNALSLLAVRQAAESQNQSE
>NZ_CP009287.1|WP_042266459.1|2321774_2322554_+|precorrin-6A-reductase
MIFILCGTSDARELALALSREQLPLLASVVTPSAAERLEAAGITTRVGRLDQQGMIACLRELGCSAIIDASHPFAQEAHDHAMGAAAALGLPYLRYERRSLMYEQHPRLLVVSSYEEAARRAKQLKGSVMLTTGGKTLEIFAEALLGDPAIRLTVRLLPCLENMQKCHLLGIEQRNIIALQGPFSRELNEALYKQYGTQVMVTKESGAEGSLDEKVHAALDMGIYVILIARPQAFYKEYGAVYGSFEEMVSAVTAFNKK
>NZ_CP009287.1|WP_052415706.1|2319246_2321778_+|precorrin-3B-C(17)-methyltransferase
MNKKGKLLIIGFGPGRLEHITGRALAALEESEAVIGYTTYVDLIKPLLRHQEIVGTGMTEEVSRAQEAVRRAESGQTIAVISSGDAGVYGMAGLVYEVLIERGWNRVTGVEVEVIPGISAIQSCSSLLGAPIMHDSCTISLSDHLTPWESIAARVEAAGAADFVIAFYNPRSGKRTRQIEEARQILLRYRDPSTPVGIVKSAYRDREQTIVTTLQEMLDHEIGMLSTVIVGNSATMVYDGLMVTPRGYERKYSLGADTQALKPHERLRTSSEPWSLAALNPAGNVVKVNICGFCGMRKESAAGAARRLHQQLNGRLVPRGLQISVAGCGMACSSAVLEDIGLVYSKGSYELYLGGKKTGRTPHAGSKVREGMNEEEAVAAVTEVVEQYCAQGSQNERFYTFFERMGSGISANYPQAESVLHWEHTHTYSHNHEEAQGITTVLLVGHGSRVEEGNEELRNFTRALAVRKPELAIETCFIELSSPSISEGIDKCVLGGAGTVYVVPIILFAAGHSKLDIPQALDQAKQKYPGVEFIYGRPLGVQERAVEILLDRIAGAVPQPVQVSSQPELPGDRLGETLLLEHGSFAQQDTGGQETAAALSARVMASAADRGEPCSKVRDEDTIVLVMGRGGSDPDANSDFCKLARLLWERTPYKSVETCFIAITKPSLPAGLERCLALGARKIIVLPYLLFSGVLMKQFNETVNRFAAAHPEIEVEAGTGLGSHPLLSDMLLERIEETLTGRTAANCDNCMYREEAAAHHHHHHHHDDHHHHHDDHHHHHDDHHHHHDEHHDHHSHGEEGHKSGCCSQPAPADADRGVPPQSGASYSEDAVHPAGAPEARRPR
>NZ_CP009287.1|WP_174469023.1|2318205_2319090_+|ATP-binding-cassette-domain-containing-protein
MDMDYSLAFEDVVFHYPDTVEPALRGLTAAIPKGCKTALLGHNGSGKSTLFLHAVGLLRPQKGRMLQAGLPVSYAKKELAALRRRVGLVFQDPEQQLILGTPQDDISFGLRGAGMDEAEIAARCAAVLELLNLSAIQDKPIHQLSLGQKKRTALAGVMAMEPELLLLDEPTSYLDPLSETQLLDGLDSIHRKGTTVVMATHDMNLAYRWADWIIILDQGVCRAAGAPEAIFAGGELLQEIGLGLPLLAELWHSLPSRVTGGRAAPRNAGEFKALLSSLLEEGTGERARAAGRQP
>NZ_CP009287.1|WP_042266458.1|2317351_2318140_+|cobalt-ECF-transporter-T-component-CbiQ
MIRRIDAISCSNALSRISPMWKSLFAAVMFTLAYVLHPALQVLITLWMMLWCLQYAKIPPRAYGQLFGTALLFYGLSLPALLVELGRPAAGEAALCLRIPGTAQFLYMAPAGGMRAALLLARVSACLACCLFIMLTTPFGELLQVLRRLRMPQIVLELMLVMYRFLFLLDDAAHGLLLARRLRGGHRGFRSKLREAASMAASLFANTMHRYYGLSQGLAARGFTGEILLPPYVKREVPRRFALEAYAGIVLLAAAQLWMLYT
>NZ_CP009287.1|WP_025704908.1|2331298_2332180_+|ROK-family-protein
MKVLGAIEAGGTKFVCGTGNEDGTIIDRVSFPTTTPEETMGLVLDYFTGKNVEAIGIGSFGPIDPVIGSPTYGCITTTPKPHWGQYNLVGAVAGHFSVPIGFDTDVNGAALGEYKWGAAQGLDSCLYITVGTGIGAGAVVGGKLVHGLSHPEMGHILVRRHPEDKFEGFCPYHSDCLEGLAAGPAIGKRWGKPAGELPADHPAWAMEAHYLAHALMNYVLILSPQKIVMGGGVMKQSQLFPLIHAKLQELLGGYVQHPALNEAIGSYIVPPQLGDNAGLSGALGLAKLALDRE
>NZ_CP009287.1|WP_025704907.1|2332539_2333559_+|HRDC-domain-containing-protein
MQIVFMNRLSRMSGADQEGLAQLWIGEEEGTWRLGWRDFSGSEETGDSLWYEGGSWNEMLCVYRHELAVKMGDGYRPLIDGAFHDEDSQSGSRNQEQLKLQYFSEQHGNESVYEELCSWRRGKASIERKAPYILASNRLLRMLSAFLPRTLEELLQIPGVGEGKASQYGEDWLGITSAAEREHSFPLGWVHEAVDEEHFVSWQYKQKELKYKKQLERLRLRRVLLQGIEEGLGIEQLKAASGVSRREVLEAVEELEKDGYSVEKLIALELAEVSSSEQAGVWTAYELMGDTFLKPVLFKAYGEGFSPAEGLDVYYERLRLIRIRYRRGQSAKLEGATNL
>NZ_CP009287.1|WP_042266463.1|2333652_2334597_+|1-phosphofructokinase-family-hexose-kinase
MIVTLTVNPSVDASTGIEKVVPDHKLRCREASYKPGGGGVNVSRAIHRLGGESLALYASGGLHGQLLHKMLEQEGVGHQEIPISGQTRENLIVVEESTGQQFRFDMPGPHFIEGDWQQCLEQLKSLGGKPTYVVASGSLPPGCPVDFYGRVIEAVKPWQARVIVDTSGEALQKAADAGVYLLKPNARELEELTGHSITGDAEVRAAALELIEQGRTEVVVVSLGGEGALLITSEGSEHLKAPEVPVLSVVGAGDSLVGGLVYSLERGWPLRRAVQFGIASGAAAVMNPERQLCKREDTERLFMQIEAADAETQR
>NZ_CP009287.1|WP_025705585.1|2334667_2335603_-|magnesium/cobalt-transporter-CorA
MKIRLVNAGVFTPVDDIEETLTAPAEGFYWIDADVEDLELLQPLYNLHDLAVEDCLSEEDQRPKLEIYESHYFIVVNSIRFDDEEIFLRALNVFLGRNFIITVTKQKIHELRVLKPILWEQEVSEPDRFLYLLIDLVVDNYFSVGDRIEARIEKLEEDILMHTKKSHLSEIIGLRSEILWLKKMLGPQKEVINTLNKKDLRLIDDQLQKYFSDIYENAVKISETFETYRDLMGNLREAYQSSIANRANEIMRVFTAITTIFMPLTVITGIYGMNFDNIPEIHTRYGYYGVIAVMVTLGCGMLFIFRKKEWL
>NZ_CP009287.1|WP_025705584.1|2336257_2337187_+|homoserine-O-succinyltransferase
MPIKIPDSLPAKEVLSGENIFVMDESQAFHQDIRPLRIAILNLMPTKETTETQLLRLVGNSPLQVDVVLLHPSSHTSKNTSAEHLKSFYKTFDEISDRRFDGLIITGAPVEQLDFEDVNYWEELKGIFEWSKHNVTSTMHICWAAQAGLYHHFGVRKVNLDEKCFGVFPHTVNQNNVKLLRGFDEVFHVPHSRHTDVSREDILANPELQILAESEEAGVYLVSTLDGKQIFVTGHSEYDPFSLKWEYDRDIAKGMDIAIPKHYYPKDDPQRTPPAVWRAHANLLFSNWLNYYVYQETPYDIDQTDYLVF
>NZ_CP009287.1|WP_025705583.1|2337224_2338424_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MDEKLRIESRLAQIGSQEDPATGAINYPIYNATAFRHPRLGQSTGFDYIRTKNPTRWVLEEAVAELESGDAAFGCSSGMAALTTLFALFGQGDHLVVSLDLYGGTYRLLERILSKYGISASYVDTNDLDGLEASRRPNTKAVFIETPTNPLMMITDIEAVCTWSRRHGLLTIVDNTLLSPFFQRPLELGADIIVHSATKYLGGHNDVLAGLIVTKGAGLSAEMAVLHNSLGAVLAPNDCYQLMKGMKTLALRMERHESNALALARYLLEHPAIAEVFHPGLPDHPGYEIQKRQASGNTGIFSFKVKDARYVEPLLRHIRLIAFAESLGGVESLMTYPAVQTHADIPVEIRDAVGVDDRLLRFSVGIEHADDLIADLGQALEAARIELEEASAGTTPAEE
>NZ_CP009287.1|WP_025705582.1|2338704_2339841_+|dehypoxanthine-futalosine-cyclase
MSAIDLILEKALKGERLGLEDTVRLFESNEIEKMGAAADIIMKRWHPDPLATFVIGRNINYTNVCDVYCRFCAFYRRPGSEEGYVLPDETIFQKIQETIDVNGTEILMQGGTNPNLPFSYYTDLLRGIKQRFPEITMHSFSPAEIMKMVEVSGLPLEQVVREIHAAGLDSLPGGGAEILDDRTRRKISRLKGSWREWMDVMQTAHKIGMNTTATMVIGLGESMEERALHLLRVREAQDECIANKYDSEGFLAFISWTFQPDNTNLKLDRQTPEEYLKTVAISRLVLDNIKNFQSSWVTMGPEVGKLSLQYGCNDFGSTMIEENVVSSAGATYKVNIESITQLIREAGKIPAQRNTRYDILRVFNDANAKIDNDFVMQN
>NZ_CP009287.1|WP_025705581.1|2340124_2344507_+|bifunctional-2',3'-cyclic-nucleotide-2'-phosphodiesterase/3'-nucleotidase
MGERRWNKPIASILATTVLAAQVLGGVFAVPVLGAGKAEAAGAEAVDPGTPGTINLRLMSTTDVHTNVMGWDYFKNNSSLTVGLDRTATLVKQAKAEPKGTYNLLLDNGDLIQGTPLGTYLSKQADPEGKLNQIHPMIAAMNIMGYDAATLGNHEFNYGLNYLESVTSATYATYSHSNNFPKFPYLNANVYVDDKDNDPANDVNYFTPYKILDKKVKDSNGVEQTIKVGLIGLVTPQIMDWDKANLEGKVITKDIAATASKFVPQMKAEGADVIVAMAHTGFDKSAVEGDFSENDINALSKVAGIDAITFSHTHKVFPAADVKSLDASFKDAAGNELPGIDNGKGQINGVPAVQAGYGGGYLGLIDLAISQDPAKSGHWKVDKSASTSSTRSIYRNENKVNISNVEPDPEVDAAVAANHQATIKYVSEQLGTTNVPMNSYFALVQDDPTVQIVTYAQKRYVENLINTDPSLAQYKGKAILSVGAPFKAGRNGPDEYTEIEAGPLTIRSASDLYLYDNTLKAVEVSGATVKEWVEMSAGAFNRIDPAVSTPQELLNSKFAVYNFDVIDGIKYKIDVTKNAKYNTDGTINDGSSSRVTSITYNDQPLNMDQKFIVVTNNYRASGGGNFPIKDGKLIIDTLEENRQVLMDYIKEAGTVNQPADNNWSIQPIKGDVKVTFTSSPKAKKVLLKDDKITDTGTQNDKGFEIYNLDLSGDVKVHILGINDFHGQLDTTSYVGDNAVGTAAILATYLKTARAQYANSLLVHNGDSVGASAPVSSRERDKPTLEWMNLMKFDVGTLGNHEFDQGVAALKAQIFGGVDPVNEKITHAPVNFDYINANAVDKDTGKPIIKPYTIKEVGGVKIGFIGVVTKATPSKVSPAGTAGVRFLSAEEEVAAIGKYAAELQKQGVETIIVLAHDPATTKGDVTTGEAADLAKALPADSPVDVIVAGDNHALANGVVNGKLIVQAYSYGTAFEDIKLVIDPDTKDVKAKSATVTSTLQKGVEPDAETVALVNKYLKLHPELALPVGTTDGSVTRTDAYNNEAPLGNLIADAMRQADFKDGKGIADFAFMNPGGIRADLPKGNVSFGDLAKIQPFGNTLVKLTLTGEQIKTLLQQQWGTKADGTADTKTLQISGLKYTANMYLPVADRIASLTKTDGTPISMTESYTAVVNNFMAAGGDNYSVLTKASESLAGPIDLDVFYDYVQNTFKGGAITAAIEGRITNNLTASTPAPGQGGGGGGGTAPTATPKPTATPAPAATATPAPAATATPAPTPTPAITFGDLGKVAWAQEAINSLAAKGILKGIDGKNFAPNKTVTRAEFVAMLVRALNLTPSGASTKFSDVKQGVWYTDAIAAAVNAGIVKGSGNGKFEPGREVTREEMALMIAAALKDQLQPIDSASVLAGFGDKSKIASYAQEAVAQLTQLGIVNGVDGKKFAPKSDATRAQAAVIIYRMLEKKAS
>NZ_CP009287.1|WP_025705580.1|2344608_2344791_-|transcriptional-regulator
MSVKEQVFDIIKASETPLSAGEVEKLSGLERKAIDKAFTELKKENAIVSPVRCKWEAAVK
>NZ_CP009287.1|WP_025705579.1|2344953_2345796_+|SPFH-domain-containing-protein
MKEKTLHPISGFLVIALIAICVAGGIYGAAHDYAMIPVILFVVAGVLCTSITVVQPNKSVVVTFFGKYVGTIVNSGLFAVIPFSIRKTVSLRVRNFNSVKLKVNDVEGNPIEIAAVIVFKVVNSAKALFDVDKYMAFVEIQSETALRHVASRYPYDNFNESGMSLRANADEIAKELATELQERLSLSGVEVIEARLTHLAYSTEIASTMLQRQQASAILSARQIIVEGAVGMVDMAIRQLKESGVVELDEERKAAMINNLMVAIVSERGASPVINAGSLY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_16

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_16

2486348-2486423

Orphan

Consensus_repeat	Method
AATTAGTTAACCTTTTTCCACTTAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_16

>merge|NZ_CP009287|16|2486348-2486423|CRISPRCasFinder
AATTAGTTAACCTTTTTCCACTTAGCCTGCGGAGAACAGAGTGCTGGGGCAAATTAGTTAACCTTTTTCCACTTAG

>NZ_CP009287|16|13|2486348-2486423|CRISPRCasFinder
AATTAGTTAACCTTTTTCCACTTAG	CCTGCGGAGAACAGAGTGCTGGGGCA
AATTAGTTAACCTTTTTCCACTTAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703334.1\|2480891_2482463_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP009287.1\|WP_025703331.1\|2484586_2486173_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270298
NZ_CP009287.1\|WP_025706410.1\|2492851_2494498_+\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP009287.1\|WP_025704004.1\|2489914_2490805_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP009287.1\|WP_025703333.1\|2482649_2483576_+\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP009287.1\|WP_042266491.1\|2476843_2477503_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP009287.1\|WP_174469053.1\|2498826_2499087_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|131898
NZ_CP009287.1\|WP_081954745.1\|2506887_2507946_-\|YheC/YheD-family-protein	unknown	unknown	gnl\|CDD\|373047
NZ_CP009287.1\|WP_025703332.1\|2483593_2484520_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_042266493.1\|2490993_2492859_+\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP009287.1\|WP_081758879.1\|2476575_2476773_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381300
NZ_CP009287.1\|WP_025706699.1\|2476059_2476482_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225064
NZ_CP009287.1\|WP_042267976.1\|2496343_2498440_+\|alpha-galactosidase	unknown	unknown	gnl\|CDD\|269892
NZ_CP009287.1\|WP_025706409.1\|2494620_2495961_+\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270452
NZ_CP009287.1\|WP_025706700.1\|2475457_2476039_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP009287.1\|WP_025703336.1\|2477602_2478631_+\|CapA-family-protein	unknown	unknown	gnl\|CDD\|214858
NZ_CP009287.1\|WP_025708534.1\|2499298_2499976_+\|HAD-hydrolase-like-protein	unknown	unknown	gnl\|CDD\|136007
NZ_CP009287.1\|WP_036702864.1\|2479117_2480854_+\|histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP009287.1\|WP_025704005.1\|2489078_2489915_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_042267978.1\|2500238_2501363_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	unknown	unknown	gnl\|CDD\|99738

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703334.1\|2480891_2482463_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	4.06124e-42
NZ_CP009287.1\|WP_025703331.1\|2484586_2486173_+\|extracellular-solute-binding-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	4.40534e-29
NZ_CP009287.1\|WP_025706410.1\|2492851_2494498_+\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	4.55479e-47
NZ_CP009287.1\|WP_025704004.1\|2489914_2490805_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.37801e-77
NZ_CP009287.1\|WP_025703333.1\|2482649_2483576_+\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.12271e-103
NZ_CP009287.1\|WP_042266491.1\|2476843_2477503_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.95041e-16
NZ_CP009287.1\|WP_174469053.1\|2498826_2499087_+\|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein	gnl\|CDD\|131898	TIGR02851, stage_V_sporulation_protein_T, stage V sporulation protein T. Members of this protein family are the stage V sporulation protein T (SpoVT), a protein of the sporulation/germination program in Bacillus subtilis and related species. The amino-terminal 50 amino acids are nearly perfectly conserved across all endospore-forming bacteria. SpoVT is a DNA-binding transcriptional regulator related to AbrB (See pfam04014). [Regulatory functions, DNA interactions, Cellular processes, Sporulation and germination].	4.0275e-16
NZ_CP009287.1\|WP_081954745.1\|2506887_2507946_-\|YheC/YheD-family-protein	gnl\|CDD\|373047	pfam14398, ATPgrasp_YheCD, YheC/D like ATP-grasp. A member of the ATP-grasp fold predicted to be involved in the modification/biosynthesis of spore-wall and capsular proteins.	8.25272e-97
NZ_CP009287.1\|WP_025703332.1\|2483593_2484520_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.32698e-63
NZ_CP009287.1\|WP_042266493.1\|2490993_2492859_+\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	3.8802e-45
NZ_CP009287.1\|WP_081758879.1\|2476575_2476773_+\|aldo/keto-reductase	gnl\|CDD\|381300	cd19074, Aldo_ket_red_shaker-like, Shaker potassium channel beta subunit family and similar proteins. This family includes voltage-gated potassium channel subunits, beta-1 (KCAB1B), beta-2 (KCAB2B) and beta-3 (KCAB3B). KCAB1B and KCAB2B are cytoplasmic potassium channel subunits that modulate the characteristics of the channel-forming alpha-subunits. KCAB3B is an accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit. The family also includes Drosophila melanogaster Hk protein, a founding member of aldo-keto reductase family 6 member B1 (AKR6B1), as well as voltage-gated potassium channel subunit beta (KCAB) from Arabidopsis thaliana and Egeria densa, founding members of AKR6C1and AKR6C2, respectively. Hk protein, also called hyperkinetic, is a beta subunit of Shaker (Sh) K+ channels and shows high sequence homology to aldoketoreductase. KCAB, also called Shaker channel b-subunit, or K(+) channel subunit beta, or potassium voltage beta 1, or KV-beta1, or KAB1, is a probable accessory potassium channel protein which modulates the activity of the pore-forming alpha subunit.	6.16498e-19
NZ_CP009287.1\|WP_025706699.1\|2476059_2476482_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	5.03814e-13
NZ_CP009287.1\|WP_042267976.1\|2496343_2498440_+\|alpha-galactosidase	gnl\|CDD\|269892	cd14791, GH36, glycosyl hydrolase family 36 (GH36). GH36 enzymes occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-galactosidase, alpha-N-acetylgalactosaminidase, stachyose synthase, and raffinose synthase. All GH36 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. GH36 members are retaining enzymes that cleave their substrates via an acid/base-catalyzed, double-displacement mechanism involving a covalent glycosyl-enzyme intermediate. Two aspartic acid residues have been identified as the catalytic nucleophile and the acid/base, respectively.	7.84406e-90
NZ_CP009287.1\|WP_025706409.1\|2494620_2495961_+\|extracellular-solute-binding-protein	gnl\|CDD\|270452	cd14749, PBP2_XBP1_like, The periplasmic-binding component of ABC transport systems specific for xylo-oligosaccharides; possesses type 2 periplasmic binding fold. This group represents the periplasmic component of an ABC transport system XBP1 that shows preference for xylo-oligosaccharides in the order of xylotriose > xylobiose > xylotetraose. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 proteins are comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.05918e-36
NZ_CP009287.1\|WP_025706700.1\|2475457_2476039_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.67491e-10
NZ_CP009287.1\|WP_025703336.1\|2477602_2478631_+\|CapA-family-protein	gnl\|CDD\|214858	smart00854, PGA_cap, Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.	9.42555e-92
NZ_CP009287.1\|WP_025708534.1\|2499298_2499976_+\|HAD-hydrolase-like-protein	gnl\|CDD\|136007	PRK06698, PRK06698, bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated.	8.74378e-39
NZ_CP009287.1\|WP_036702864.1\|2479117_2480854_+\|histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	9.74629e-45
NZ_CP009287.1\|WP_025704005.1\|2489078_2489915_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	6.45571e-65
NZ_CP009287.1\|WP_042267978.1\|2500238_2501363_+\|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme	gnl\|CDD\|99738	cd00614, CGS_like, CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.	9.98313e-150

>NZ_CP009287.1|WP_025703331.1|2484586_2486173_+|extracellular-solute-binding-protein
MTNKKKKLTVTLATMMTLGTILSACGGGNNNNTATEATNAGATAATEGAATNSGAPDTSKEVKLKMLLIGGQPGDYDKVFGELNTKLKEKINATVETEFLDWSDWTQKYPLKFAANEDFDLVYTANWAFYNDQALKGGFLELTDDMLQKYMPKTWEAMPKVNWEQAKVDGKLYMVPNNNVEVTDKVVLYREDLRKKYNLPEINSPETYANYLKTVAKEEKGLTAYGAKPADGWKWHELDQTLLEQNNDFNLVDANLLPLAYKLDDASGKIFNIYDTPEFTSLLKYYKDLADNGAWSKNVVSNKNDVWQDIKAEKVSSYAHNLGTVAANLAEMRRDKPDVELGIADLTPDHKKIAAIATQNGMSIHATSKNAERSLMLIDLLQNDKEIHDLTMYGIAGTNYNPEGDDKYTAGPAAANYTGFSNWGWNSPLNRQDAAYPKEADDMFNSWQASIYHFPLETFVFDSAKVKNEVANIGNVMLRYAIPLEYGLIDDIGKGQADLIKQLKAAGIDKVQTEMQAQIDAFLAAQKK
>NZ_CP009287.1|WP_025703332.1|2483593_2484520_+|carbohydrate-ABC-transporter-permease
MSTTTAKIQTTKVRKRVNKDRLTLSIIGYVTLIVLAIFCIVPFLLVVSASLSEESSIIEKGFQLIPSTFSTEAYGLLFKYPADMLRAYGVTITVTLIGTVLGLFLTSMTAYVLSRRDFKWRGRFSFFFFFTTLFSGGLVPSYLLIINFLHLKDTLLVLILPMLMNVFYIIVMKSFMSSIPDAITESAKIDGAGDFRIFLQLIVPLSKPALATIGLFIALAYWNDWYNALLYISKSELMPLQYYLYKMLGNMDGMRKAMMASGAVVNTDLPTESLKMAMTIVATGPILLAYPFIQKYFVQGLTIGAVKG
>NZ_CP009287.1|WP_025703333.1|2482649_2483576_+|sugar-ABC-transporter-permease
MKQKQHGFWDDVKKYRTLLFMLTPAVLFFLVFAYVPMAGIVLAFKQYNYTDGIIHSPWNGLDNFRFFFGSGDAWRVTRNTALYNIAFIIVNNVLQIFAGILLFEVAGKWFRKITQTILFLPYFISWVVVGAIAYNLFNFDVGTVNVLLKGLGMQPVDIYNTSAYWPVILVVVSAWKALGYGTIMYLAAITSIDTEMYEAAEIDGANIFQRIMKITVPNLIPTVIILVLLAIGNIFRGDFGMFYNMVGNNGLLFSSTDVIDTFVFRSLTTSNEIGMSAAAGFYQSLLGFVTIMLANYAVRKYDKDRALF
>NZ_CP009287.1|WP_025703334.1|2480891_2482463_+|response-regulator
MSINVLLVDDEAVDLEWMRRRVLASGLNIAVVGTASSGFGALKIMEEAQVDLILSDIRMPIMTGTEFARRAKVLSPKTKIVFISGHEDFSYAKEAIEINASGYLLKPVQDKDLYEMLGSLCAQMEQDREQDRSFSEALSLVNKELLLRWLDEASPDSAEPHLHSVLTPLLQNGAAVAIVEIDDLEWKMRNLSGEDTRNITRQIAGVIKAFVEDAKLGTWIAVHHTRFVILSPLPQDSFLSLLEELIRKVADSSPCTVTIGVGRYAAEESGLHESYRQAQAALSAKWLLGKNRLIRDTTQSSPRGTPGAQIELTVERLLEAIIQYDLVSIDDHLLELFTKDLPSGGRKEVYELIIRITSKLHADLQQQNENLYELLQWESHQPDILFQFETIHDILSWLRRRFFELSELLYVKRQRQKRKLIDEIMRYVEEHLEQKITLKEVAAHFDFTPNYLGYLFKEEYGLPFSEYVNERKTSRVSELLRDPTLKIYEIAERMGYKNIIYFNRQFKQNTGMTPGEYRKKHKI
>NZ_CP009287.1|WP_036702864.1|2479117_2480854_+|histidine-kinase
MPKLKKYMPFTYKMMIPYLLLVLLTDVIIGYISYSMLTDSRTEMAESNIRTGMGQARNNIRYQMDEIQRMSDNLFSSQPFQRALELKGTPFEIYLAMLDEIVPQITAPLQLFGNKIRFMLYTPNSDLNIVSGDNLDEPIHDSDYYILPLADIAGSEWYHSLKDSKRDNLWLQIDTDQKLDNLSHVRRLVNFSDYKTVIGYVRITVSLEDLFGGFDTFPLEEGITLRLVEETTGNILFQRGRVNDAAADGDFLSLHEKIPGSSFVIESLVPYTYLTKDAGRLRRVIVAVCALSFLVMTVIGFVVARLSGRKMSRIVGLVRSFQEGNFQKRIRFSGNDEFVQIADSFNVMATHIQELINSVYVQGIQKKQAELEALQAQINPHFLYNTLSTISSLANLGEIEKVTGMVQGLSRFYRLTLNQGNVYIELEKELEQVATYLEIQRVKYADAFTVYVDVEQEILHMQVIKLVLQPFVENVFKHAWFGETIAIRLTGRQVGNNIELKIIDNGIGMRPEDMKRMMQGPSQAGGYGVKNVNERIKLRYGDDYGVTIASFFGAGTTVQLLLPAGMKDNEEMDEGFAP
>NZ_CP009287.1|WP_025703336.1|2477602_2478631_+|CapA-family-protein
MRRFAVITLVLFLLIPGQAAFSQGASPQEKINLVFAGDILLDGFVGDQIANYGVNFPFAKVAPVLKKADIAFANLETPVSVRGKAAEKSFAFRSKPAALAGLNYAGIDGVTVANNHILDFGQDAMLDTLVHLDKYKIGHTGAGKNSNEAFKPYIQTVKDKKIAILGVSRVLSSPSWYAGKNNPGAASAYTPEPMLGAIKKSAKENDYTIVYIHWNNEFKDYPEPYARSLAKQMIDSGADIIIGAHSHCLMGIEYYKHKPIYYSLGNFVFNRSTRGGDKTVHSMLVNFEISKNSVKGRITPVKITGGQPGFMGKGYNKDTISRMNQLSFNARIAADGEVSEKQ
>NZ_CP009287.1|WP_042266491.1|2476843_2477503_+|class-I-SAM-dependent-methyltransferase
MPTHPYVSRFFVNADARRDKLIYDLPESWWSRPYEYEWCTNFVSPHDVVLDAACGISHPLKFYLAGYSAEVHACDIDARILSRDAIMQDIASDIGEEAARLVEARRTTRLHLAQANLTALPYENESFDTIFCISVLEHLSLEDSVRAVREFHRTLNGEGLLVLTFDYPTVNLLRMNEVLLQAGFEYWGETDFKLPADAVRTEQWGGLNCFRAVLKKARI
>NZ_CP009287.1|WP_081758879.1|2476575_2476773_+|aldo/keto-reductase
MGEEQVQDEIPHKAIETAYGSGMDFFDTANVYEKGAAEKVLGETLCGYPRESYVLATKTIPGRPV
>NZ_CP009287.1|WP_025706699.1|2476059_2476482_+|GNAT-family-N-acetyltransferase
MRVERVTTEAGLQEAFRIRREVFVEEQGVALADEFDDHEKHAEHILLYQEELPVGTARLRSVDGWAKLERICLSAPYRKSGLGSVIIDTLEKMAVERGHRQAKLHGQKQAEGFYQRLGYVTSSQVFMEDGIPHVLMVKQL
>NZ_CP009287.1|WP_025706700.1|2475457_2476039_+|TetR/AcrR-family-transcriptional-regulator
MTAGAILQAALFQFAEKGFEGASLAGIAQSVGIKKQSIATYFPKKEDLFIAAFQEMARHYIEFLDRLYREILGTSVEVRLREIVYRTYFYRVEYPVLTAFYKRSVQFPAPFFQEMLEQQISMLEQRSAAFYRAIFEEGMNSGEIRRQHTESLLSAYYCLQDGIAMQMFFYSQEEFGRRLKDIWEIFWAGIKQT
>NZ_CP009287.1|WP_025704005.1|2489078_2489915_-|carbohydrate-ABC-transporter-permease
MKTNNNKAGRIILEVVLVILSLLFLYPLFLTIINSLKSFSEVMTDVIALPKHLALSNYSYVWKFINYPRLFLNNFIITGLGLLGIVFISSIAAYKLARTKSRLSGIIYFLCIMPMLIPFQSIMLTVLQTAKNLNLSESTWGLGLLYWGFGAPLAVFIYHGFVKGIPTEIDESATIDGASSFRLFFSVIFPLLKSVTTTIVIIDVMWIWNDFLLPLLMVNGSPDTKTLTLAAYTFVGQYTSDWQYAMTAMVMAVLPSIIVFIFLQKYIVKGVVAGAVKG
>NZ_CP009287.1|WP_025704004.1|2489914_2490805_-|sugar-ABC-transporter-permease
MLKTLGRRWREKLDFGLFTLPVLICIAVAFYIPFVMTIRYSMTKWNGISKHPKFVGLDNFQQIFTGDSNFSSSAWFTIKYAVLYIVIVNVLAILLAVLLDMKLKSTSWLRAAFFIPYILSLVIVGFIWKFIFMQGFNSLGESTGWSFFGLSWLGTPGLAFISILGVSIWQSIGFYLVIYIAGLQSVPDDLKEAATVDGAGAMRRFFSITLPLLAPSITISVFMALTNSIKVFDVILSLTGGGPGGTTYSIAYDIYRDTFQNNLYGYGTAKALILFVAVLVVTIIQLTVFKRREVEA
>NZ_CP009287.1|WP_042266493.1|2490993_2492859_+|sensor-histidine-kinase
MIKRTLYKLFEPLLERISRRLANKLILLFTIIIILVVASLTFISYGMLRKESVNSSISSTRSNLLLVGRNLESYLDGIAQLSLPQISYDEFNYAILHESGDYASKMYVEDYLKNLYYSRKDLEAVYLYVIKEHKYYFVTKENYNITVRVAEHPPIENLPWYKRALASPFSRSYQSFVKERTPEERQGDYPINTGKSFMGYHRLLRSIVTREPQAVLSLYFNSSVTDEIMKDIPFSDGEHLMYISPDNEPFAVDDREFYRKSEEAGLLEQLTPAQGGRLTWSDSEQKYLVMYDISQKEGWKLVKPIPYKQIYEAATTTRKWSYSVGLLFLIVSVILVSFTSNRITSPLKNLSLQMKRFSTGSFDAEAAVEGNDEIAYLSRHFNKMVEKTNELINERYKMKIVEKNAVLKALEAEINPHFLYNALQAISTKALKNNNDDIVEMVDNLALTLRYCISGRDVVQAREELKHIERYLALQKARFGSRMQVEYNWNDSLLELRIPKLSIQTLVENCIKHALEKVSSTVTIRIEAHITPAHSVISVLDDGPGITEERLQQVLSSLEIQWEDRGGGEAEEGDSESIGLKNLNTRLKLLYGEEAGLMITSNEHGTQMDMRLPRGGLGQHV
>NZ_CP009287.1|WP_025706410.1|2492851_2494498_+|response-regulator
MYKVLIIDDEEPLREAINILGDWEGLGVDQVLEATDGKMGLEMLRKHKIDLALVDMKMPELNGSQLLQIAEREFPDLLLIVISGYNDFEYTRQAIRSKVVDYLLKPVNRSDLNSALRKAVDVLEAKRKRESEFINRNITLNMSLPKLKEKMYLSIIERSFKNQSNEAFLPLIGADKPGNHFAVGVLRMLNLEQVRRDRFHEDRDLLHFAVTNVINENSDGHFESFSFASPRSEREFIAIFTLKGSYGEDAAFLSLHHMKKTASTLKELFGILCAGGLGQPYSDVTEIAQSYELATATLDGIDLLSLKGSTVSNSGYTKSAAKDSPTLTGRMPLIRSSLESGNAGHAKSILSDFTRKWKSSEHFSLGEADRTIQEFIILLGDIALELDAVPERLRRGKSKGLRGLGISSDFASFGEFEAVLSSILDVYAGEISRSLAGDRSSVLENIKAYIDNHYFENIKISMFTDKYFLSREYLMKLFKGQYGYGIHEYVQKVRMDKAKELLSDPALKIQDISERLGYKDKNYFSKAFRNYYDCSPSEFRLLLTEGGK
>NZ_CP009287.1|WP_025706409.1|2494620_2495961_+|extracellular-solute-binding-protein
MKGKRIMALSASLLLAGGLLAGCGGNNSNNAANNAGGTNGGTNTAAPATDSTKPVTINMFTASPEYTDAFNAYIAEYKKVKPNVTINLEIMQADYNTVLKSKIAAGSTPDVFQTTAGGDIDTFAEYSADLTNEPLAAAMTDAVRSNMSSSDGKVLGLPVKGNLFVLMYNKKLLADAGITSIPKTTAEMDDAITKLEAKGITPFANAYKEWWVWKHIFQHFVDAAATDAGIDAKTLVGKFIAGDTTFKDHPVLYNNFFNFIDTTVKHGTDKPLERDSNAEVSDFALGKAAFMTGKGAWDEEAIKKITPDFDLGIAGYPVSDKPEQSQIITGADQALRINKDSAVAAQTIEFFNWLYTSEYGKNWFSTVAKVIPPIKDAPMPDLQMPKEMEEILKTEKSGDLSVNYSLDTFHQKFGELMQAYIGGSKTKDQAIDEIQKAWIQFGSAEQ
>NZ_CP009287.1|WP_042267976.1|2496343_2498440_+|alpha-galactosidase
MDSKLIEIAENGLYLTIEITGEHDVRLLHFGAAPLQDGVIAEKNKPGFRLLELQLSGEDRDEYHGRTHRASYPGLRMEYAGHKDSRNALGRKLEICLVDPVTGIRAEQHLQFYTGVQTVRCWTVLKNTGTDEAAVEYVSTFALTGVDKEGSGGRNDKIEVTIAHSGWQSELQWRTYRLPELGMSHLADRGSKRIAASNTGSWSAAELLPMAVLHNKESGTSLFWQIEHNGSWHWELTDQYDQLTLLVSGPTEHDNHWWLKLAPGEEFTTVPVAVGAVQGGFQGAAEQLTAYRRLIRRPNEDNELLRIIFNDYMNCLWGSPTTGKLLPLIDAAADVGCEYFCIDAGWYAPGEWWDGVGQWEPSAERFPEGIKYVLDYIRSKGMIPGLWLELEVMGINSPKLAETDDSWFFMRHGKRVKDRSRYQLDYRNPRVIAHADGVISRLVEQYGVGYIKMDYNINAGIGTETDADSFGDGLLQHNRAYLAWLDSIFARYPNLVIENCSSGGMRMDYAMLSRHSIQSTSDQEDYVQYAAIAAASPAALTPEQSAVWSYPLREGDDEEVIFNMVNALLLRVHQSGHLAELEPRRRELVKEALDYYKSIRAHIPQATAFWPLGLPDSEGEWVSFGLRHGNTRYLAVWRISGEAAAVKLPIPELQGQGAEVSCAYPQQHHSEWSWSPSEGVLTVSIPQGKTARLFELHA
>NZ_CP009287.1|WP_174469053.1|2498826_2499087_+|AbrB/MazE/SpoVT-family-DNA-binding-domain-containing-protein
MVMKATGIVRKVDELGRIVIPIELRRTMGIDIKDPLEIFVDGEKIILRKYEPTCIFSGSAENLINFKGKMVSKDVLDELIASFDHV
>NZ_CP009287.1|WP_025708534.1|2499298_2499976_+|HAD-hydrolase-like-protein
MKLKKPEAIIFDMDGTLFQTESLLLPAYHKMFDILRAEGLYTGPTPPEERILSSLGMLLSQIWKNVMPDADEAVHRRADELLLQLEVEGLEAGGTLLYPKVTETLAALHERGVKLFVASNGLEDYIHSIVVVHELKELFAGLYSAGGQGTATKTELLRILLDEHGIKEAWMVGDRSSDVEAGKGNGQTVIGCAYAGFGRQDELKGSDVIISAFDELIGLYDNSTV
>NZ_CP009287.1|WP_042267978.1|2500238_2501363_+|aminotransferase-class-I/II-fold-pyridoxal-phosphate-dependent-enzyme
MKEESGYIVSAAAPPIYETAPFFFNSYDHYSEAANDEKTHYVYSRGKNPTVQIVEEMLAGLEGGEACKCFASGMAAVSAALMCSLAAGDHVILVGHIYETTVSLIKYLTKFNISYTIVHSTSISSVAGALKPQTRVILMESPTSFTFDIVNIPEVAELAKSKGIRTIIDNSWATPLFLKPLEYGVDIVVHSASKYLGGHNDLVAGAVISSQHIMDRIYEEEYELIGGSLGPFEAWLLIRGLRTLPLRMDAHQKNGLAAARFLSEHPAVAKVNHPGLPSHPQHELASTQFKGYSGLFSFELKDSGYEEIRQMVNKLQLIRIGVSWGSAESQIISPNYGYNQQDLKKQHMPESLIRLAVGHEPAELLIQDLNNALS
>NZ_CP009287.1|WP_081954745.1|2506887_2507946_-|YheC/YheD-family-protein
MWKCCSCTHVYDECVIVFTPADVHVSKDQIHALVYDVKSGTWSRKWRPFPNMIYDRCRIQRSKRFEQLLRFRARYGHLTFLNRPLRNKWTVYQTFSQKSRFRQHMPETLLYQSSADLHRILKSSPVVYVKPASGTGGRGILRIERLKEGKSLYDIQGRRQSRQIIAPRKVSLTRLESIVRQWCLGGRFLVQQGIPLRLPSGRYHDYRMLVQKNGQGVWELTGMAGRVGAARSVTSNLHGGGHAIRAEILLKQWLGSQEKAAKAMKTAEKLGLDAAAYLEDSFGTLCELALDLAINREGQIYVLEVNPKPAREVFARSGDSGTYRKALMRPLEYAMWVYKNKNTPSAAKVVEE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_17

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_17

2728335-2728408

Unclear

Consensus_repeat	Method
TAAGTGGAAAAAGTAAACTTAAT	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP009287_17

>merge|NZ_CP009287|17|2728335-2728408|CRISPRCasFinder
TAAGTGGAAAAAGTAAACTTAATCCCACCTCAATAAGCAATCGTGGAGATTTAGGTGGAAAAAGTAAACTTAAT

>NZ_CP009287|17|14|2728335-2728408|CRISPRCasFinder
TAAGTGGAAAAAGTAAACTTAAT	CCCACCTCAATAAGCAATCGTGGAGATT
TAGGTGGAAAAAGTAAACTTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703916.1\|2730954_2731722_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227311
NZ_CP009287.1\|WP_025705586.1\|2726507_2727947_+\|DEAD/DEAH-box-helicase	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|223587
NZ_CP009287.1\|WP_025705595.1\|2716439_2716628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703921.1\|2736968_2737730_-\|methyltransferase-domain-containing-protein	unknown	unknown	gnl\|CDD\|181382
NZ_CP009287.1\|WP_025705591.1\|2722289_2722556_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042266553.1\|2728546_2730808_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|378963
NZ_CP009287.1\|WP_025703917.1\|2731851_2732190_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|367559
NZ_CP009287.1\|WP_025705590.1\|2722716_2723730_+\|phosphotransferase	unknown	unknown	gnl\|CDD\|225213
NZ_CP009287.1\|WP_025703923.1\|2740830_2741547_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP009287.1\|WP_081758600.1\|2738755_2740663_-\|serine-hydrolase	unknown	unknown	gnl\|CDD\|365903
NZ_CP009287.1\|WP_025705593.1\|2717940_2719974_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP009287.1\|WP_025703918.1\|2732193_2733126_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_036704948.1\|2720699_2722034_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP009287.1\|WP_155990310.1\|2735250_2735478_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703919.1\|2733236_2734952_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP009287.1\|WP_025705594.1\|2716704_2717658_+\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|223609
NZ_CP009287.1\|WP_025705587.1\|2725763_2726426_+\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|224336
NZ_CP009287.1\|WP_042268000.1\|2724185_2725460_-\|histidine--tRNA-ligase	unknown	unknown	gnl\|CDD\|237097
NZ_CP009287.1\|WP_025703920.1\|2735704_2736934_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340897
NZ_CP009287.1\|WP_025705596.1\|2714745_2715990_+\|glycosyl-hydrolase	unknown	unknown	gnl\|CDD\|377924

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703916.1\|2730954_2731722_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.23455e-26
NZ_CP009287.1\|WP_025705586.1\|2726507_2727947_+\|DEAD/DEAH-box-helicase	gnl\|CDD\|223587	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis].	3.48342e-142
NZ_CP009287.1\|WP_025705596.1\|2714745_2715990_+\|glycosyl-hydrolase	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	3.98838e-31
NZ_CP009287.1\|WP_025703921.1\|2736968_2737730_-\|methyltransferase-domain-containing-protein	gnl\|CDD\|181382	PRK08317, PRK08317, hypothetical protein; Provisional.	6.33882e-22
NZ_CP009287.1\|WP_042266553.1\|2728546_2730808_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|378963	pfam12831, FAD_oxidored, FAD dependent oxidoreductase. This family of proteins contains FAD dependent oxidoreductases and related proteins.	2.2282e-131
NZ_CP009287.1\|WP_025703917.1\|2731851_2732190_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|367559	pfam03551, PadR, Transcriptional regulator PadR-like family. Members of this family are transcriptional regulators that appear to be related to the pfam01047 family. This family includes PadR, a protein that is involved in negative regulation of phenolic acid metabolism.	2.44995e-21
NZ_CP009287.1\|WP_025705590.1\|2722716_2723730_+\|phosphotransferase	gnl\|CDD\|225213	COG2334, COG2334, Putative homoserine kinase type II (protein kinase fold) [General function prediction only].	1.35823e-33
NZ_CP009287.1\|WP_025703923.1\|2740830_2741547_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	2.14397e-76
NZ_CP009287.1\|WP_081758600.1\|2738755_2740663_-\|serine-hydrolase	gnl\|CDD\|365903	pfam00144, Beta-lactamase, Beta-lactamase. This family appears to be distantly related to pfam00905 and PF00768 D-alanyl-D-alanine carboxypeptidase.	6.32295e-60
NZ_CP009287.1\|WP_025705593.1\|2717940_2719974_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	1.53377e-43
NZ_CP009287.1\|WP_036704948.1\|2720699_2722034_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	7.91401e-20
NZ_CP009287.1\|WP_025703919.1\|2733236_2734952_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	0
NZ_CP009287.1\|WP_025705594.1\|2716704_2717658_+\|radical-SAM-protein	gnl\|CDD\|223609	COG0535, COG0535, Predicted Fe-S oxidoreductases [General function prediction only].	1.86122e-20
NZ_CP009287.1\|WP_025705587.1\|2725763_2726426_+\|HD-domain-containing-protein	gnl\|CDD\|224336	COG1418, COG1418, Predicted HD superfamily hydrolase [General function prediction only].	1.33088e-33
NZ_CP009287.1\|WP_042268000.1\|2724185_2725460_-\|histidine--tRNA-ligase	gnl\|CDD\|237097	PRK12420, PRK12420, histidyl-tRNA synthetase; Provisional.	0
NZ_CP009287.1\|WP_025703920.1\|2735704_2736934_+\|MFS-transporter	gnl\|CDD\|340897	cd17339, MFS_NIMT_CynX_like, 2-nitroimidazole and cyanate transporters and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Escherichia coli 2-nitroimidazole transporter (NIMT) and cyanate transport protein CynX, and similar proteins. NIMT, also called YeaN, confers resistance to 2-nitroimidazole, the antibacterial and antifungal antibiotic, by mediating the active efflux of this compound. CynX is part of an active transport system that transports exogenous cyanate into E. coli cells. The NIMT/CynX-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	1.39643e-146

>NZ_CP009287.1|WP_025705586.1|2726507_2727947_+|DEAD/DEAH-box-helicase
MSVFRDYSLNVEIIRALDVLNYLEPTEVQSKVIPAALKGQDLIVKSQTGSGKTASFGIPLCELVDWAENKPQALVLTPTRELAAQVKEDITNIGRFKRIKAVALFGKQPFAPQKQELTQKTHVVVGTPGRVFDHIERGTLTLNRIKYLVIDEADEMLSMGFIEQIEQIIQKLPRERVTMLFSATLPDAVKNLCLKYMNGPADIEIEASGITTAAIEHALIEVRQAAKFGVLLDLLTVENPDSCIIFCRTQEQVNELFRGMADLEYPVDKIHGGMMQDERFEVMNAFKRGQFRYLIATDVAARGIDIENITHVINYDTPMEKESYVHRTGRTARAGKSGKAITLATPNEHKWVQEIESYIGFSLPVMKAPSEAAVAYAKPAFEAKLGKQQVRKKGKTEVMNEDIMKLYFNGGKKKKLRAVDFVGTIAKLEGITADDIGIITIQDNVTYVDILNGKGAQVLQAMKDTTVKGKLLKVHVAKK
>NZ_CP009287.1|WP_025705587.1|2725763_2726426_+|HD-domain-containing-protein
MNYTQIITAAENFAKEQLGQDTTGHDWFHTDRVRNTAGLIAEMEQADVFICTLAALLHDVADEKLNPSKEAGLRKVHNWLAEHLSDEGQIRHIMLIIETMSFSGGGGEPMSTLEGQVVQDADRLDALGAIGITRVMVFSGAKGRPVYDPEIAPRDESLQKEYRDYSKGTAVNHFYEKLLKLRDLMNTPYGRKLAEERHAFMESFLEQFYKEWNQGSRKLL
>NZ_CP009287.1|WP_042268000.1|2724185_2725460_-|histidine--tRNA-ligase
MQNVKGTYDYFGREQAIRQKVRSTLSELFELYDFESMETTLLNELELLTSKYAGGDEILREMYQLTDQGGRQLGLRYDLTIPFAKVIALNPGIEFPYKRYEIGKVFRDGPVKKGRLREFLQCDADVVGIAGPQGEAELMQLAAEAFRRLEIPVIVKWNNRRFLGEILTAAGMPVEEHLSVMLSLDKLAKIGSRGVLAELEGKGIAPAAVSALAELLNMDAPSFEGLVEKYELSGQPGALEVLALQRLIAAVGLAETCVFDPFLSRGLSFYTGTVYEIFDASGAYTSSLGGGGRYDSIIGKLVGREDIEYPTVGISFGMESIMALLGERPVREEASRVLVIPVGECLPQALTTAAAFRAAGIRTAVDTGKRKLKKTLAAANTKGIRYIILIGESEAAEGKIRLKDMLQQSEELLTVEAAIAVISK
>NZ_CP009287.1|WP_025705590.1|2722716_2723730_+|phosphotransferase
MDESCCRDHCHDRRHLLNRARRIVLWALPQYDLEWEWIRYIGMSDSVTYQIQTRNAGRFLLRIHRAQVSESEIRSELMLLRMLNGVLHFPVPEGIPGIGGDDLLAVAGEEPEFSWVTLMRWVEGEEAAKDLTEPALLKMGKMMGRLHQAAAQFNPPAGFTRPVWGAESFRGEMIKLEHHYPGFLSKKAWKSYQAAAAKIIAELEKMDVSNDTYGLIHADLHSGNVVFHGDEPHPIDFGRCGYGYYLYDMAGSLLELYPDQRKVFIEGYESVMKLEADYARKLESFFIMVMIGNYCHYAPIPEEAARLREEQPYAQAYIREYLQGTPFVFKRIEPAEA
>NZ_CP009287.1|WP_025705591.1|2722289_2722556_+|hypothetical-protein
MKYINADIVLPEDLLKEVQKYIHGGMLYVPKPEGLRARWGENSGGRAYLNQRNNEIRKQYRAGLAIEHLADQFCLSCDSIKKIAYGKK
>NZ_CP009287.1|WP_036704948.1|2720699_2722034_+|helix-turn-helix-transcriptional-regulator
MRDYLLKPGAREDLNELLSNLGQEFEQKAKAQSQRAPDHGNMGKSNQIQLLQESFLLQMVRDEGPSLPVVRERLQQLGLAPLAAGDLRLQFAAVEVRMPSEIMAGRQERRNLIKQAFQEHCQVTSSHWKGIYPFGNDADVAVMYFLVILKPGVDHARKTQRFIEQLNHSVTSELKLECVSGIGGEVKGLKRLKHGYASCMLSWSRSSSGGKADGHCRDQELSQAFTPEVEQKLKRAVENLDTHGFRRELDNMLSSERDTPELTFLALRLILLLASTAKKFELGSSSLQRYVWNSRMAIIQTPSHEGVRSLLDELAQLVMEEVKKVRFSDGWHLIEAVRKFAGENFCCRLELSFLAEMFYLNEADLPRQFKQHVGITFSDYITKLRMAKAEELLQDNELKVGDIAGLAGYSGFGDFSASFKKYSGKSPKEYRERLLQRRAARGCP
>NZ_CP009287.1|WP_025705593.1|2717940_2719974_+|methyl-accepting-chemotaxis-protein
MKIRMKLSVLMIVVTLISTVLMGVFTYSKSTRTILDLTETAMAQVNTNKAQTIEAMIDKEKRSMELVAGESEIAELLLKSASGSLTSGDPLRAEVNAKFQQMVKDAGNLEHMFVADMKGIGIADSDTKLIGADFSERNYTKNVLKTAGPVISETLKSKSTGAYVLAFIHPVMSGGKMIGFVGSAVNANSIIKYLADAKVANAPSSYAYLVDETGNILYHPDEAKIGSPVENAQIKAVVEEVKAGGTVADGNVEYTFEGTEKKAAFTVLPQTKWTLVLTGDVDEVMKPVTNMTKFIVLLGLGSLLLTLLVGVSVATRISSPIIKLTELINRTAELDLKYDTQYEYLTKNKDETGTIAKAMFHTRAVLREMAGSLVTISTKVLDNAETLEKLSIDVRENAHDNSATTEQLSAGMEETAASTQEMTAAIHEVENNVRVISGRVKEGAGVSVQITERALALQHDATESIGNTREIYDSVKVEMQKAIEQSDSIHEINVLADTILSITSQTNLLALNAAIEAARAGEAGRGFAVVAGEIRKLAEKSSETAAGIQDVVKNVYSSVEQMKGNSEAILHFIDQNVLGDYERLAEVSEQYNSDATAINGLMSQFEEAADHLSETVSSIAIAVNEVAATVNEGAIGVQDIAVKTADIVEKTFHEAKMADENTQSAKEMQRLVEQFKI
>NZ_CP009287.1|WP_025705594.1|2716704_2717658_+|radical-SAM-protein
MSMKYKSLELDKPLTYELEGLEVGVTSNCNFRCDYCCAYNRNDGQSIKGKEVIRILEELPNLKRVRLSGGEVTLKFEDCVEIVSYCASRGIQTQLNSNGSLLNPERIEQLEKAGLTTIHISFNFTTAGAFSRYYNIHTSIYDKIRENITMFAKTSVDVVLETLLFNETQDNMQEISDHVYAMGVRTHEIQNSIIMGHTGWKAIAAREQLKNAVNGLIARKKEDTTLYFTCMDRFMEQLGFQEQPGVYFPHCIEGKKQLHLHGNGDILISELCHPVIIGNIYKGTSLKDLYSDMPAPLSDFLDKLPCPALDALFPQEV
>NZ_CP009287.1|WP_025705595.1|2716439_2716628_+|hypothetical-protein
MLESVKLDDLHKKISSLSGVNIDDASLIQTLALAKEIDAEYAKLNEKWKQARQEILAQQMSH
>NZ_CP009287.1|WP_025705596.1|2714745_2715990_+|glycosyl-hydrolase
MKCFAKILLCAAITAASFTSLPAKGAQAAAGGVRIVLDGYPLPFPVEPAVMSGTTMVPFRAISEALGVKVEWNQAARQITATNKEASGTKKVILTLGSTSASVNGAAVKLAVAPQNVRGTTMIPLSFFGQQFGAGVSWNQATKTVSITSPKKDLYTLGFYAQGAYSEVSLIPDFDAVAFGWSRIDRSGQYTTSGPEFRWPQAAGDVTPESIVRNAASGGTAPYLMVYSGDKELELTKNVEDLQLQQQTIAGIVDTAAQKGFQGIALDLEGLGMTGDKTVVQSQYNTFVKNLSAKAKAASLKLTVILHPLNSSYKGYDYKTLASIADDLVIMAYAYEGETGPEPMNKVDEAIRLALQQVSKDKLILGISVYSENKTSVNAKIGLAKRYGLKGIAIWRLGLIGQPVWSEMGQSVEL
>NZ_CP009287.1|WP_042266553.1|2728546_2730808_-|FAD-dependent-oxidoreductase
MKQELVNNDITVIGGGLAGVCAAIAAARLGQKVALVQNRPVLGGNSSSEVRVWVCGATAHGTNRYARETGIMGELFVENQYRNPEGNPYLWDLVVLEAVKAEANITLYLNTDVHEVQAEGREDDRRITAVVGWMMGSERRITFKSNVYLDCTGDGLIGFLAGAKFSLGREARSEYNEEWAPEVADGITLGSTILFYTKDAGVPVNFVPPSFAKDISETSIPLRRVIRSGDSGCHYWWIEWGGEHDTVHDNEMIRDELWSVIYGIWDYIKNSGKFGAENMTLEWVGSLPGKREYRRFIGDYVLNQNDIIAQREFTDAVAFGGWSIDLHPPQGMYAEASGSKHMHADGVYHIPFRSLYSANVRNMLMAGRDISASHVAFGTTRVMATCAVIGEAAGTGAALSSRLGITPRELHERHLAELRQTLLRQDASVIGLRSSDEADLARRARVSASSVQTALELAQPGEACRLLHDVAVLFPADPGISGFDLLLDAEQAAEVTVELWDTGRGENYVPHTLQARAAAPAEAGQRQWVAFDLQWQPENPQNAFVIIKANPAVSLYHSLEPHSGVLAFFKDEQPQVSKDLEDHSTDQLVVLWKMKGQARRPFCFRLGSPTAAFAADKAVNGYHRPYGGPQQWMSEPMKDGRAEWLQLDWDSEQTFGEIHLTFNDDVNEDLVNLHHHRTAFAIIPELVRNYRVEALGAGGVWTEIAAGTGNRKRKAVHLLPEPVQARSLRVIIESTNGSRHAELIEIRAYGSAQ
>NZ_CP009287.1|WP_025703916.1|2730954_2731722_+|helix-turn-helix-domain-containing-protein
MQLLNHIYWRQKGAFDLAEDLYDTWVAFAVEEGIFRYEIGVQSGEAGFADVVLCPPGVPFRRAAITPLTFHYLQFSASREEAAELLPPAGRSLINDTKRLASTYAYLRQASEENDLPSELWKNHLLMDLWQLFQLERRQSRLKERKFTEDVLMAEAAVLLEEQAGETVSLQELAHRLALSPVQLTRRFREAFQETPSDYLKAVRLKKARSLLAASTLTLAQIAERCGYENGFYLSRVFSKAMGVSPSEYRRRSRV
>NZ_CP009287.1|WP_025703917.1|2731851_2732190_+|helix-turn-helix-transcriptional-regulator
MEFEKELLKGYIDIILISIVKEKPMYGYEIAKKVRDISGGAFDLKEATLYMALKRLEKQGAVEAFWGGEHEASGGGRRKYYRLLAAGEDRLRGSRQGWTIFRNFMDSLLGRE
>NZ_CP009287.1|WP_025703918.1|2732193_2733126_+|hypothetical-protein
MTDYKLKGKSAGRIAAYVENLCRQMKEPSDQVNDFREEMTANLTSSVLEQMHQGLPEEEAVTEALARFGELGEVKKELVRIYKIKRTFAGIVLKGAFSLLLLSAVVLGLIIGVWNEWAVSKYPKEAYAIVQGEANVRGTESLPEPLQRKLQNWVDRTWGVKGVSVEPTYGAMDHRVNLFMYAGNPLAEGMLRFVNLSEDAPAPKQEGFLVKTNAFSEFGYNPADPDLDQTQYPFVVHVAMTYFNYTFFYSLGLFLLGGYILLFAVWASMNAYYERRGNVAWVLLFLLTNVLGYGLYVLSRRWDHPGLQVN
>NZ_CP009287.1|WP_025703919.1|2733236_2734952_-|ABC-transporter-ATP-binding-protein
MLRRFFSYYRPYKKLFILDFTCAVGAGLLELAFPVAVNKFIDDLLPGQDWPLILIACLALMAIYALNTAMQYIVTYWGHMLGINIETDMRKKLFDHIQKLSFRFFDNNKTGHLIGRITNDLNDIGEVAHHGPEDVFIAVMTLVGAFILMADINLKLAVITFIVVPLMAWIIIHFGRNMTSTYHQLFGNVGSFNARIEDNVGGIRVVQSFANEEHEKQLFAADNQMFRSTKLMAYKLMAKSSSVSYMMTRLITIVVMICGAWFFIQGELEIGEFVAFILLSNIFFRPIDKINAVIESYPKGIAGFRRYLEVIDTEPDIADKPGAVDAGPLRGDIVFDQVSFGYDPGRPVLDGISLRVNAGETIAFVGPSGAGKTTICSLLPRFYDVTGGSVSIDGTDIRDMKLNALRKQIGIVQQDVFLFSGTIRENIAYGKLDAGLPEIWEAARRAHLEELINGLPAGMDTVIGERGVKLSGGQKQRLAIARMFLKNPPILILDEATSALDTETEAAIQQSLADLSVGRTTLVIAHRLTTIKNADRIIVVNEDGISEEGRHEELVNAGGTYSRLYQAQYHA
>NZ_CP009287.1|WP_155990310.1|2735250_2735478_-|hypothetical-protein
MNRSAIQTKLYIRKSVARNTAEGDATQKPEVFYPENKPKFHKKGGASYPKKQKKPVFGDWLVEHIKGIAIIPREI
>NZ_CP009287.1|WP_025703920.1|2735704_2736934_+|MFS-transporter
MRSKQQTAATLELDKTRPDTGTTRILLAVGIIFVAAALRAPFTSVGPLLGMIRDDLGLSSTLAGAITTLPLLAFALLSPFAPQLARRFGTANVLMLALLALSTGILIRSGAGVVMLYAGTAVIGLSIAICNVLLPGLIKGKFPERIGLMTGVYTVSMNICAAAASGISVPLAQHAGFGWRGTLALWFAVAALATIFWIPQMRNRTKGSTADHKPSSIRIWRSPLAWQVTLFMGLQSLLYYVLIAWFSVILSERGMSSSHAGWILSLMQLAQLPFTFFVPLWAGRMKNQRSLVIITSILFMIGILGVWLGSTAWMAVWAIGIGIAGGFAFGLAMMFFSLRTRSTQEASELSGMAQSVGYLLAAMGPAVFGLLHDVTHSWNVPLALLAVASVLLFVAGLGAGSSRFVGDSK
>NZ_CP009287.1|WP_025703921.1|2736968_2737730_-|methyltransferase-domain-containing-protein
MNQHWNTGTYDKDMAFVSRFGAPLIELLQPQPGERVIDWGCGTGDLAAAIAGYGASVTGIDASPDMIAAARSKHPQLEFVLADGQAYRSEPAADAIFSNAALHWLRDAEGAVSSMAASLRPGGRLIAEFGGQGNIASVTAGLPRAFDAIGCSGKLELPWYFPGIGEYAALLEQNGFTVELALCFDRPTPLQGGEQGFRQWLNTFADGILSVLSPDQRTAVLASLEQELKPQLFQGDQWVMDYRRIRVAAKKNS
>NZ_CP009287.1|WP_081758600.1|2738755_2740663_-|serine-hydrolase
MMKLKSVLIVSVILWMGTFGTVSAAQAAGTDDALTQEQLEETLTPLLNKIMEADHIPGTAVVVTEGERIVFSKGYGYADVGKQLPVDPGHTVMRVGSLTKSMTAAAVMQLKEQGKVAMDQDINTYLTNFKVPLYHSLPITLHHLLTHTAGLDEGVYHLAAPSADKAVPAETFLQQYLATQPPVREPGTEYAYSNPGAGLAGFLIEQVTGSTLEAYMQRNLFGPLQMPSASLIHQDSDPDMAKSYQYEKGSFQEIPYSYPNLPGAGALSVIPDELAHYMIALLNEGSYQGQHILKQATVEEMQARQFTEHPGVEGVGYGLFRNRTGNGILTLSHTGDIDGFAAKMQLIPEHKLGILVVSNAESPGKPLRDQVTDAIVRLLPAPQIQDPAVAAPSTPDLEQYARTYTMGLGPQHGWGKWFRWLGGKNFEVQNAGETLRITGVFPEGTGSEESKTYIPVREGLFRDKESGELISFHQQAGVWKLTFIQGVTIEEKPAFLQQPSTLLAIYAGIGLAWPVMILIAVIRSLLRLIRRKKQQRLGHAAFIAVIFSIYLIGQLLYGNSQVIFGYPAWYALGFSSLPFLAAAAAIHLGIQTVRHQQQNTDEKRRVRYGRYLLVVMSLGYTFFLYYWNMLSVHFS
>NZ_CP009287.1|WP_025703923.1|2740830_2741547_+|response-regulator-transcription-factor
MQRTVLLVDDNREIIELLKLFLEKEGLRILEAYNGAQAWTCIQHESIDLAVLDIMMPELNGVQLLQLLRAEYKLPVILLSAKNQDSDKILGLRLGADDFISKPFNPLEVVARIHAMLRRTYDFNEPAGPVQDTLEPTSIGELMLDHTDCVLYKAGREISLTAIEYKLLATLMNAPGRIFTKKQLFEQVWSEHYYEDANTIMVHISRLRDKVEEIPKQPVYIRTIRGLGYKFAKKDDFR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_18

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_18

2828276-2828350

Orphan

Consensus_repeat	Method
AGTGGAAAAAGGAAACTTAAATTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_18

>merge|NZ_CP009287|18|2828276-2828350|CRISPRCasFinder
AGTGGAAAAAGGAAACTTAAATTCCTCAGAAATCAACAAACGTGAGGTTTAAGTGGAAAAAGGAAACTTAATTCG

>NZ_CP009287|18|15|2828276-2828350|CRISPRCasFinder
AGTGGAAAAAGGAAACTTAAATTC	CTCAGAAATCAACAAACGTGAGGTTTA
AGTGGAAAAAGGAAACTTAATTCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025704431.1\|2839528_2839747_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042266604.1\|2823968_2824421_+\|DUF309-domain-containing-protein	unknown	unknown	gnl\|CDD\|377120
NZ_CP009287.1\|WP_025703108.1\|2828580_2829975_-\|RsmF-rRNA-methyltransferase-first-C-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|183387
NZ_CP009287.1\|WP_025704434.1\|2841460_2842369_+\|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|223566
NZ_CP009287.1\|WP_020433779.1\|2839087_2839405_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704433.1\|2841143_2841464_+\|thioredoxin	unknown	unknown	gnl\|CDD\|200072
NZ_CP009287.1\|WP_167330823.1\|2821693_2821831_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703100.1\|2824492_2826040_+\|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl\|CDD\|223222
NZ_CP009287.1\|WP_025703101.1\|2826043_2826835_+\|rRNA-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|224108
NZ_CP009287.1\|WP_025705213.1\|2820275_2821697_+\|L,D-transpeptidase	unknown	unknown	gnl\|CDD\|341130
NZ_CP009287.1\|WP_025705211.1\|2818394_2819687_+\|DNA-polymerase-IV	unknown	unknown	gnl\|CDD\|179337
NZ_CP009287.1\|WP_025703102.1\|2827066_2827867_+\|Cof-type-HAD-IIB-family-hydrolase	unknown	unknown	gnl\|CDD\|319818
NZ_CP009287.1\|WP_025703110.1\|2830149_2831286_+\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP009287.1\|WP_025705216.1\|2823166_2823979_+\|GTP-pyrophosphokinase-family-protein	unknown	unknown	gnl\|CDD\|225232
NZ_CP009287.1\|WP_025705214.1\|2822043_2823138_+\|quinone-dependent-dihydroorotate-dehydrogenase	unknown	unknown	gnl\|CDD\|235388
NZ_CP009287.1\|WP_042266609.1\|2839811_2840267_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704430.1\|2838410_2838983_+\|xanthine-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|181705
NZ_CP009287.1\|WP_025705212.1\|2819845_2820088_+\|ferredoxin	unknown	unknown	gnl\|CDD\|224064
NZ_CP009287.1\|WP_025704429.1\|2837108_2838233_-\|membrane-protein	unknown	unknown	gnl\|CDD\|226458
NZ_CP009287.1\|WP_042266606.1\|2832813_2836281_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|227061

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_042266604.1\|2823968_2824421_+\|DUF309-domain-containing-protein	gnl\|CDD\|377120	pfam03745, DUF309, Domain of unknown function (DUF309). This domain is found in eubacterial and archaebacterial proteins of unknown function. The proteins contain a motif HXXXEXX(W/Y) where X can be any amino acid. This motif is likely to be functionally important and may be involved in metal binding.	2.98412e-18
NZ_CP009287.1\|WP_025703108.1\|2828580_2829975_-\|RsmF-rRNA-methyltransferase-first-C-terminal-domain-containing-protein	gnl\|CDD\|183387	PRK11933, yebU, rRNA (cytosine-C(5)-)-methyltransferase RsmF; Reviewed.	2.83461e-84
NZ_CP009287.1\|WP_025704434.1\|2841460_2842369_+\|NAD(P)/FAD-dependent-oxidoreductase	gnl\|CDD\|223566	COG0492, TrxB, Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones].	1.27261e-45
NZ_CP009287.1\|WP_025704433.1\|2841143_2841464_+\|thioredoxin	gnl\|CDD\|200072	TIGR01068, Thioredoxin-like_protein_slr0233, thioredoxin. Several proteins, such as protein disulfide isomerase, have two or more copies of a domain closely related to thioredoxin. This model is designed to recognize authentic thioredoxin, a small protein that should be hit exactly once by this model. Any protein that hits once with a score greater than the second (per domain) trusted cutoff may be taken as thioredoxin. [Energy metabolism, Electron transport].	1.13633e-36
NZ_CP009287.1\|WP_025703100.1\|2824492_2826040_+\|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	gnl\|CDD\|223222	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].	6.82638e-93
NZ_CP009287.1\|WP_025703101.1\|2826043_2826835_+\|rRNA-pseudouridine-synthase	gnl\|CDD\|224108	COG1187, RsuA, 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation, ribosomal structure and biogenesis].	1.05693e-94
NZ_CP009287.1\|WP_025705213.1\|2820275_2821697_+\|L,D-transpeptidase	gnl\|CDD\|341130	cd16913, YkuD_like, L,D-transpeptidases/carboxypeptidases similar to Bacillus YkuD. Members of the YkuD-like family of proteins are found in a range of bacteria. The best studied member Bacillus YkuD has been shown to act as an L,D-transpeptidase that gives rise to an alternative pathway for peptidoglycan cross-linking. Another member Helicobacter pylori Csd6 functions as an L,D-carboxypeptidase and regulates helical cell shape and motility. The conserved region contains a conserved histidine and cysteine, with the cysteine thought to be an active site residue.	5.16392e-32
NZ_CP009287.1\|WP_025705211.1\|2818394_2819687_+\|DNA-polymerase-IV	gnl\|CDD\|179337	PRK01810, PRK01810, DNA polymerase IV; Validated.	1.52387e-172
NZ_CP009287.1\|WP_025703102.1\|2827066_2827867_+\|Cof-type-HAD-IIB-family-hydrolase	gnl\|CDD\|319818	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily. Escherichia coli Cof is involved in the hydrolysis of HMP-PP (4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate, an intermediate in thiamin biosynthesis), Cof also has phosphatase activity against the coenzymes pyridoxal phosphate (PLP) and FMN. Thermotoga maritima TM0651 acts as a phosphatase with a phosphorylated carbohydrate molecule as a possible substrate. Escherichia coli YbhA is also a member of this family and catalyzes the dephosphorylation of PLP, YbhA can also hydrolyze erythrose-4-phosphate and fructose-1,6-bis-phosphate. Members of this family belong to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	1.86723e-71
NZ_CP009287.1\|WP_025703110.1\|2830149_2831286_+\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.31695e-62
NZ_CP009287.1\|WP_025705216.1\|2823166_2823979_+\|GTP-pyrophosphokinase-family-protein	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	1.03123e-83
NZ_CP009287.1\|WP_025705214.1\|2822043_2823138_+\|quinone-dependent-dihydroorotate-dehydrogenase	gnl\|CDD\|235388	PRK05286, PRK05286, quinone-dependent dihydroorotate dehydrogenase.	0
NZ_CP009287.1\|WP_025704430.1\|2838410_2838983_+\|xanthine-phosphoribosyltransferase	gnl\|CDD\|181705	PRK09219, PRK09219, xanthine phosphoribosyltransferase; Validated.	1.73713e-91
NZ_CP009287.1\|WP_025705212.1\|2819845_2820088_+\|ferredoxin	gnl\|CDD\|224064	COG1141, Fer, Ferredoxin [Energy production and conversion].	2.19784e-19
NZ_CP009287.1\|WP_025704429.1\|2837108_2838233_-\|membrane-protein	gnl\|CDD\|226458	COG3949, COG3949, Uncharacterized membrane protein [Function unknown].	1.40885e-61
NZ_CP009287.1\|WP_042266606.1\|2832813_2836281_+\|AAA-family-ATPase	gnl\|CDD\|227061	COG4717, COG4717, Uncharacterized conserved protein [Function unknown].	2.2158e-44

>NZ_CP009287.1|WP_025703102.1|2827066_2827867_+|Cof-type-HAD-IIB-family-hydrolase
MKYKLIALDVDGTLLNDDHKLSPENREAIAEVTRQGGQIVLCTGRSPQNSIPFMEEMGLAGYVLGHNGAATVRVEDREVLHIYGLDARGLDPYIDYCRARDIHYDVNTAFDMYVDNVANLTKEATFMYEHFRITPASLPAWEDFREPVVKFTVFTKSDILDEAQREWSTWTHLYNIVRSGEFFVDFMHPDASKGNALMNLASQLGIAQEEVLSIGNYYNDISMLTYAGLGIAMDNSPLEVKAAADAITGSNNDHGVRDALVKYCLS
>NZ_CP009287.1|WP_025703101.1|2826043_2826835_+|rRNA-pseudouridine-synthase
MSAAGNSPKKQRLDKVLSHMGIGSRSDIRKQAKQGLIRVNGTVIKDSSFHVDPYADQIEVSGEPVVYREYIYLMMNKPPGVLSATEDKRDRTVLDLLKPDYAQFEPFPVGRLDKDTVGLLLLTNDGQLAHELLSPRKHVPKTYEATVEGEVDAADVAAFAAGVELDDGYVTLPAQLTILGRERGSKTLSQISLTITEGKFHQVKRMFLAVGKKVIFLKRVSMGALKLDERLAPGACRELTAEELRVLGGGEAEGNELPNFIPI
>NZ_CP009287.1|WP_025703100.1|2824492_2826040_+|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase
MAVELPGTFMQRMKDMLGSDYEQFAESYQETPYSGIRANTLKISVEALRALSPFTLEPIPWCPSGFYTEAGARPGKHPYYHAGLYYIQEPSAMAPVELLGVQPGDRVLDLCAAPGGKSTQIAAKLQGEGLLVSNDLHPDRTKALAKNLELYGVRNGIVLNESPGRIAAAFPAFFDRILIDAPCSGEGMFRKDEDMVKQWEPETPLKYAAMQREILASAAEALRPGGTLVYSTCTFAVEENEGMIREFLNSHPEFSLIPVGGTGSFAPGLGGLPEAARLWPHKVKGEGHFMAVLRHDGSGASAEEGAVYPAHNGRDKALSVSPRNKGGKAQASAKAAAARADGGRGGKPGRAAGKSGGAAPGRQSQGMGEEAALAAYAIFAEEQLGWQPSGYPVLFGDHLYLSPLPKAALDGLKTIRPGWYVGHIRSGRFIPGHPLATALHPAESTRCLSLSSSSGEGVSYLKGETLSITADRLSVKPGSPSKGYVLVCIDGYSAGWGKWQDGMLKNEYPAGWRWT
>NZ_CP009287.1|WP_042266604.1|2823968_2824421_+|DUF309-domain-containing-protein
MAYERLYLAYLVYFNRDRDYFECHEVLEELWLARDKDPLYKALLQAAVGLYHFRNSNVRGGMIMLNRAHEVLQRYPADMLGINLAKLAREAGDYARKLETYAEQPFGYYDLTIELLDPKLAEEVAAAGRDILPSHPQRRGPQRPESSRRN
>NZ_CP009287.1|WP_025705216.1|2823166_2823979_+|GTP-pyrophosphokinase-family-protein
MDVRDWGTFLLPYEQTVEELKVKFKTMRSELKKREEYTPIEFVTGRVKRLSSILEKAQRLNVKMEDLETGIEDIAGIRIMCQFVEDIRRVAEYIRARKDLEVLYEKDYITNYKESGYRSFHMIIKYPVQTALGQKIVLAEIQIRTLAMNFWATIEHSLNYKYRESLPDEMRLRLKTAAEAASILDSEMSSIRDEILEAQKTFEENSNTTTQLLKAIHQLYFYHLVNEAIESQERFNQIWQAQDMEAMKELLDHVRELLSNAKKDSLPDGL
>NZ_CP009287.1|WP_025705214.1|2822043_2823138_+|quinone-dependent-dihydroorotate-dehydrogenase
MLYRHLGKPIFFKMDPEKAHHLVIGGLNKSDLVPGGSAAMRLMYGVPETADLAVDLFGLHFPTPVGLAAGLDKNAEAVGGFSSIGFGFMEVGTVTPKGQPGNDSPRLFRLLPDEALINRMGFNNKGAEAMAGRLKAVKKRRIPVAVNIGRNKTTPNESAHEDYRQCIRTLYPYGDFFVVNISSPNTPDLRSLQHGSELSNLLAQVKEEMALQHKQSGTAKSLLVKIAPDVSDGELEYMVHTIAEAGMDGVIATNTTLSREGLRSDKAGETGGLSGKPLRDRSTEIISRIYRQTGGKLPIIGSGGIFTGQDAYDKIRAGASLVEIYTALIYEGPEVNRKVHAGLRKLLRRDGFSHILEAVGADHH
>NZ_CP009287.1|WP_167330823.1|2821693_2821831_-|hypothetical-protein
MSTKRKPPTLQQKKEEVNRKAILWISVSLVLLILLIIVLFIVAGN
>NZ_CP009287.1|WP_025705213.1|2820275_2821697_+|L,D-transpeptidase
MKNSQHLKAYVQMHPDNKMAWYLLGKEYYKNGQHGKANYCFNQAGEVYEAFEHSKVPAEMLREYEEGLIRENRQRHESRLRLRRGLLALLMLLLLIPSAVAPGVNPDGSGASDPEIAAGDLEEPAAAEPAEEEEPLVPAVLTFTASGEDAASAGQALAAILKNRKAPSQTAVLAMKKSGRWLIWKKNLPLAATLEQSRKGKIVYQSYDPATCACEPPEAGGLQKQAEIWQEKQEELAALWSAIRSYNSSKGKPPESLKELTRPFPGNVLGETTPLMKQEFAALRAASTLQPLQASAQPSTAPSAEGTAAVGVKDTANLSKGQPPFFSRPLTIIVDKQNHRLAVTSGNIILRNYAVGLGGEKTPEGEFAVSDKVVNPNGHDNGEFGSRGMQLSDTNYAIHGTNEPDSIGKDESLGCIRMKREDVEELFAMVPMGTKVQISKGVLPDELMLPGERYPSRTPPDQTNPNKVYHWLN
>NZ_CP009287.1|WP_025705212.1|2819845_2820088_+|ferredoxin
MAKYTWVEKDTCIACGACGATAPDIFDYDDEGLAEVIYENDGNHGVTAIPDDLFDDLQDSADGCPTDSIKIADAPFNKEG
>NZ_CP009287.1|WP_025705211.1|2818394_2819687_+|DNA-polymerase-IV
MQNVDQYYPASGRVILHVDMNAFYCSVHEAEDPDQYKGKATAVAGSVELRRGIIVTCSYAARRLGISTGMQVQKALRICPSLLLIKPNFHLYRKYSNAFMQIAYSYTPLLEAVSIDECYLDITGSRQFGTPLEIAEAIQRRIMEELGLPCSIGIAPNKLLAKIASDLKKPSGISILRLRDVPGILWDKPCNEMFGIGSKTAEKLRKLGIYSIGQLAAADERMLVEHFGVMGSWLKRAGNGIDHGVVNPEREQSKSIGHTTTLPSDVVGLAEARPILLNLSDQVARRLRKQGLVASGVQLTIRTPDMKTITRSRQLETPTESAEDIYKTACDQFARHWKGDKPVRLLGVTLQGLTPKEDSAIQLDLFNYERQPKKESLNQTMDMLRNKFGENAVLTAGMLSDSHSARLRNHKERGTSLQKDNLHKVDPAEE
>NZ_CP009287.1|WP_025703108.1|2828580_2829975_-|RsmF-rRNA-methyltransferase-first-C-terminal-domain-containing-protein
MNEERLPAAYTAAIREMLGQEADAFLESCTARRTQGLRFNTLKSTSLSGRAAAAHAADLFALTPVAWCPEGYYYEEPARPGRHAYHTAGLYYIQEPSAMSAAELLAPRAGETVLDFAAAPGGKTTHIAALMQGQGLLVSNEIHPERAKILAENVERLGISHAIVTSAAPGELSRRFPEVFDRIMLDAPCSGEGMFRKDPAAIGEWSPEHVEMCAARQWDILQDAYIMLKPGGSLAYSTCTFNRKENEDTISRFLNSYPDMELICEKRLWPHVEKGEGHFVALLRKEASGETVPSQSKRGSGRSKTSPKLPSTVRDAYQQFMSWAAGELPGFPGHGMPLLFGDSLYLLPEAFSASLHTGLLDGLKVPRAGLHIAHLKKNRIEPAHALAMALEPDQAARSYDLAADSPEIQAWLRGESLPVSPELHGWTLVTVDGLPVSWGKASSGQLKNHLPKGLRILKAQTDEQ
>NZ_CP009287.1|WP_025703110.1|2830149_2831286_+|glycosyltransferase-family-4-protein
MNLLQALFFPPEQPGGVSSMIPYLQERFRSSRWDMDLFWLPKRIRGKGREEVSFETFDWTLYGESPVVQKYIQTYKDYIWWTKLRMSKNYDLIHAHHPIAGLAMKKIYPEIPLIQTLHSSYERELILNGAILEGGPEHQFLVSIYRELEHVSDRLMTVSRSFADYLAPYINQPDRIGVIPNGFDEKRFKPVPHDNDIPQLVTVTRLVPAKGIDILFKACAELKKRNHEYVLHIIGDGPSRAELEQLAQNLGIYNETIFYGYTLHPEEFMPFFDIFVLPSRAEAFGSVFAEAALSCLALVGTNVGGIPEQIEDGVNGLLVDPDDEVALADALEKVISDPGYRYELSRSAWDKAKSLYSLTRVANELKKTYLQYQPGTKG
>NZ_CP009287.1|WP_042266606.1|2832813_2836281_+|AAA-family-ATPase
MKIEELQIGGYGRLHNREMKLDSGISLLYGRNEAGKSTTLQFIRAMLFGIPGRANLLERYEPAQGGQHGGMLTARDREGGQWRIRRYMTGGETPGRSEKLHITVSYPDGRTEEAGQTEMERRLLGGISRSMFRQLFAVSLDELQELGALQSEEMSSYLFHAGMGGGGEIMRAERRLQQDAEKLYKPRGKLQEAAKVLQSIEKLEREAAESRSYLPRYNQNIADLEAVELQLTQIEDRRRIAAGRLVHLRKAQEIRELWLKWSEAKLELAELPVIAGAFPEDGAARWRTLETEVQNAEGVVFRLKRQHRELAAELEKHPPDERLQAQGPHLEALDRRRSSYEDKKSEAERLAAELDALQVHLERILRGIGAGWGKAELAGFSATAADREAARRFAAGFSAYDRRMEAREAERQTLRSRLAAAAAALQAADRALAREHAAGATDFAGLAKRSPRELLQLWDELQLAAERWREAQLGGEPLRGRGAAGSGTGSAGRRAQRYRRMLLAGAALTLLLPPALWLTGAPPVSAWAALGLLAAADLALWVALRAERRADTAPPGHGGEGSAAAAEMRRLRGLLLSGAAPESGLGRPGQRPAGGVSPDASGLEAGMKELRRLMDAWNAWRQRVEKLAAEREACRVELDSLSGQEHALAAELEQAEADFTALAGRYEEWLHERKLPDGLSPEGLPDIFSMVEQGNELLRQEHKLAVRLGNLKSECFFFEREVSALMIEAGDGAIAEVGSGQNEGAGRDVGTSADAGHQNLSSDDPVNELEHSAGAVQALRSSDGVAATDRSDMPNAPAAADHEHPFSGSKTTSVSATPLQQQFEAVGLSLLSWLELRKREWDLLQMEQLRREGMNVRLLELQEELAVSSRELEELSRRSCELLHEGGAVDGEEFLRRSSAVQRRVELTKSIRQWELAMFGGWENQAAAELLTLLETHDAYTLAQERNTAEENAVSIEDERNAMLQHRGKLLQEREYLLERGLEDSVLQQLEEQRAALRVIAGQYAVTALAAELMGRTRRIYEREKQPQVLLLASEYFAKLTEGEYRRVVMTLGNKELKAEHKNLGLLDSGLLSRGTAEQLYLAIRLALAETMSRQANLPLLFDDLFVNFDERRLHAALALLGELSANRQIIMMTCHRHVVEAAARIIPAAQVISV
>NZ_CP009287.1|WP_025704429.1|2837108_2838233_-|membrane-protein
MKSHVRTLQIAFTYIGTIVGAGFATGQEILRFFTRYGHWAVLTILFSTVLFIWLGTKMMIIARRVQAESYEDFNRHLFGERTGRSISLFTMIILIGVNSIMLAGAGAIFQEHLGMPYQAGLLLTILGSYLLLKRGISGILQINSLVVPLMLTLSLIIIFNTLGVPGAERFLFLPTDHSFFGAWMSPLLYTAFNLGMAQAVLVPLARHTNDEKALLRGGILGGIGIGFMLLAAHFAMSSQMPGILQYEIPMGTIAIRLGPAVQSIYLLLIFMEIFSTFVADIFGVGVQLQQRLPVAPVLVTPLLMLICYVFSQFGFSSLLSIFYPIFGAVSLVWVVMLLRAPMSPPPGPADPPPGKEGKGITIAAVKPVIRITRK
>NZ_CP009287.1|WP_025704430.1|2838410_2838983_+|xanthine-phosphoribosyltransferase
MELLKKRILEEGVVLSDQVLKLDALLNHQVDPMLTMEMGREFAGRFADAGVTRVVTVESSGIAVAFATAYELKVPLVFARRKKTLLADPDALCERVPSFTKGIVTDIMLSRQFISPDDKVLFIDDIIANGDAARGLIKIIHRSGAELVGLGVVVEKSFQAGARTIREQGIRLESLVRIMSLSEGKIVFDE
>NZ_CP009287.1|WP_020433779.1|2839087_2839405_+|hypothetical-protein
MGKEPVTEQFFIDKLTEAKDHFERALDCKHTEFDDLYPYMIEHPQFFWYKRYVAWSELLTITSLCEELSFNWRQKFSDHQVEYLEQRVMSAKVLDFWFEKNEALI
>NZ_CP009287.1|WP_025704431.1|2839528_2839747_+|hypothetical-protein
MISDEQLDAYRISGEKIRVVRDGLESNDVKGIVLAWDESQVMIRRPNKRVVKLDRNYIYQPFAEPRQGPENI
>NZ_CP009287.1|WP_042266609.1|2839811_2840267_-|hypothetical-protein
MATTKRSTLNAPLIPEDITKDEKSLVRSYLLLTFIHKVFERDCRVIGRSGLFKTPQLYMELVSGATKKTSLMLQEVTRELTAHNLKITTIRQDQRGVEAQYSCRGYAGEMNIPWPGFRNEMMLRMRAYLGLNPELNVLPREEAVEQMALSI
>NZ_CP009287.1|WP_025704433.1|2841143_2841464_+|thioredoxin
MAIQHATDQNFNQLVQGNGVTVVNFWASWCGPCRMFAPVLEAFAKEAEGKVSVIKVNVDENPVTSAQYGIMSIPSTLIFQDGTLKYKETGILPAGTLRALASGEAG
>NZ_CP009287.1|WP_025704434.1|2841460_2842369_+|NAD(P)/FAD-dependent-oxidoreductase
MSYDCAIIGGGPAGLNAALVLGRARRKVIVFDDNQPRNGVTHASHGFITRDGVTPAEFRRMAYEEVLRYPSVTRQSFQVTDVCRAGNEFLIATENGGSVTARKVLIATGLREIMPDIPGLSEHYGRSLFNCPYCDGWELRDQPLIVVSGQPGVFHMTKILYNWSKDLIVATGGADVLTMEQRELLESRNIRIIEQPVAAFIGSGGKLRQVEFADGTHFERTGGFVAPRLQPKADFQAQLGYEVTESGGIAANEMGKSSVPGIYAAGDASYVMPSQLIYAAAQGSKAAMSINMELTEEEFAYR

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_19

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_19

3188450-3188551

Orphan

Consensus_repeat	Method
ACGAAGTAAAACCGGAGAAGTCATGCTCACAAAACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_19

>merge|NZ_CP009287|19|3188450-3188551|CRISPRCasFinder
ACGAAGTAAAACCGGAGAAGTCATGCTCACAAAACTTAAGCATATGCTTCCGAAGCGAGTTTTGTACGAAGTAAAACTGGAGAAGTCATGCTCACAAAACTT

>NZ_CP009287|19|16|3188450-3188551|CRISPRCasFinder
ACGAAGTAAAACCGGAGAAGTCATGCTCACAAAACTT	AAGCATATGCTTCCGAAGCGAGTTTTGT
ACGAAGTAAAACTGGAGAAGTCATGCTCACAAAACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025706893.1\|3183398_3184631_-\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|234605
NZ_CP009287.1\|WP_025706903.1\|3193743_3194187_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009287.1\|WP_025706899.1\|3187775_3188261_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025706904.1\|3195245_3195713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_155990460.1\|3187082_3187664_+\|phosphatase-PAP2-family-protein	unknown	unknown	gnl\|CDD\|239486
NZ_CP009287.1\|WP_025706895.1\|3185402_3186512_+\|lactonase-family-protein	unknown	unknown	gnl\|CDD\|378416
NZ_CP009287.1\|WP_025706901.1\|3189873_3192231_+\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|226482
NZ_CP009287.1\|WP_025706902.1\|3192511_3193732_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP009287.1\|WP_020426913.1\|3183092_3183287_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|227213
NZ_CP009287.1\|WP_025706905.1\|3195696_3196260_+\|macro-domain-containing-protein	unknown	unknown	gnl\|CDD\|394878
NZ_CP009287.1\|WP_025706900.1\|3188565_3189597_+\|aromatic-acid-exporter-family-protein	unknown	unknown	gnl\|CDD\|377599
NZ_CP009287.1\|WP_036705838.1\|3196316_3196793_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009287.1\|WP_025706892.1\|3182416_3183016_+\|nitroreductase-family-protein	unknown	unknown	gnl\|CDD\|380317
NZ_CP009287.1\|WP_025706890.1\|3179074_3180592_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP009287.1\|WP_081758888.1\|3180717_3182151_-\|metallophosphoesterase	unknown	unknown	gnl\|CDD\|380032
NZ_CP009287.1\|WP_025706896.1\|3186677_3186899_-\|RNA-chaperone-Hfq	unknown	unknown	gnl\|CDD\|379947
NZ_CP009287.1\|WP_025706908.1\|3197082_3197763_+\|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl\|CDD\|234816
NZ_CP009287.1\|WP_025706894.1\|3184848_3185184_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379842
NZ_CP009287.1\|WP_025706907.1\|3196801_3196999_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_020431819.1\|3194365_3195013_-\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234947

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025706893.1\|3183398_3184631_-\|peptidylprolyl-isomerase	gnl\|CDD\|234605	PRK00059, prsA, peptidylprolyl isomerase; Provisional.	6.2015e-45
NZ_CP009287.1\|WP_025706903.1\|3193743_3194187_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.12752e-18
NZ_CP009287.1\|WP_155990460.1\|3187082_3187664_+\|phosphatase-PAP2-family-protein	gnl\|CDD\|239486	cd03392, PAP2_like_2, PAP2_like_2 proteins. PAP2 is a super-family of phosphatases and haloperoxidases. This subgroup, which is specific to bacteria, lacks functional characterization and may act as a membrane-associated lipid phosphatase.	1.82109e-54
NZ_CP009287.1\|WP_020426913.1\|3183092_3183287_+\|hypothetical-protein	gnl\|CDD\|227213	COG4876, COG4876, Uncharacterized protein conserved in bacteria [Function unknown].	3.24153e-20
NZ_CP009287.1\|WP_025706901.1\|3189873_3192231_+\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|226482	COG3973, COG3973, Superfamily I DNA and RNA helicases [General function prediction only].	0
NZ_CP009287.1\|WP_025706902.1\|3192511_3193732_-\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.83609e-82
NZ_CP009287.1\|WP_025706895.1\|3185402_3186512_+\|lactonase-family-protein	gnl\|CDD\|378416	pfam10282, Lactonase, Lactonase, 7-bladed beta-propeller. This entry contains bacterial 6-phosphogluconolactonases (6PGL)YbhE-type (EC:3.1.1.31) which hydrolyze 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonising enzyme carboxy-cis,cis-muconate cyclase (EC:5.5.1.5) and muconate cycloisomerase (EC:5.5.1.1), which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold.	5.55123e-120
NZ_CP009287.1\|WP_025706905.1\|3195696_3196260_+\|macro-domain-containing-protein	gnl\|CDD\|394878	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. This family includes eukaryotic macrodomain proteins such as human MacroD1 and MacroD2, and bacterial proteins such as Escherichia coli YmdB; these have been shown to be O-acetyl-ADP-ribose (OAADPr) deacetylases that efficiently catalyze the hydrolysis of OAADPr to produce ADP-ribose and free acetate. OAADPr is a sirtuin reaction product generated from the NAD+-dependent protein deacetylation reactions and has been implicated as a signaling molecule. By acting on mono-ADP-ribosylated substrates, OAADPr deacteylases may reverse cellular ADP-ribosylation.	3.68966e-67
NZ_CP009287.1\|WP_025706900.1\|3188565_3189597_+\|aromatic-acid-exporter-family-protein	gnl\|CDD\|377599	pfam06081, ArAE_1, Aromatic acid exporter family member 1. This family consists of bacterial proteins with three transmembrane regions that are purported to be aromatic acid exporters.	5.79153e-37
NZ_CP009287.1\|WP_036705838.1\|3196316_3196793_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.58598e-20
NZ_CP009287.1\|WP_025706892.1\|3182416_3183016_+\|nitroreductase-family-protein	gnl\|CDD\|380317	cd02140, Frm2-like, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.	2.05968e-110
NZ_CP009287.1\|WP_025706890.1\|3179074_3180592_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	1.29676e-21
NZ_CP009287.1\|WP_081758888.1\|3180717_3182151_-\|metallophosphoesterase	gnl\|CDD\|380032	pfam17839, CNP_C_terminal, C-terminal domain of cyclic nucleotide phosphodiesterase. This is the C-temrinal domain found in Listeria monocytogenes, Lmo2642 cyclic nucleotide phosphodiesterase. The auxiliary C-terminal domain, consists of five alpha-helices forming a long helical bundle, and is connected to the catalytic domain pfam00149 by two loop segments. It is suggested that this auxiliary domain of Lmo2642 might confer functional specificity to the protein through the interactions with unknown factors or involving the substrate recognition.	2.92055e-30
NZ_CP009287.1\|WP_025706896.1\|3186677_3186899_-\|RNA-chaperone-Hfq	gnl\|CDD\|379947	pfam17209, Hfq, Hfq protein.	2.97688e-23
NZ_CP009287.1\|WP_025706908.1\|3197082_3197763_+\|ribose-5-phosphate-isomerase-RpiA	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	3.91246e-115
NZ_CP009287.1\|WP_025706894.1\|3184848_3185184_-\|hypothetical-protein	gnl\|CDD\|379842	pfam16409, DUF5017, Domain of unknown function (DUF5017). This family of proteins is functionally uncharacterized. This family is found in various Bacteroides and Prevotella species. Proteins in this family are around 350 amino acids in length.	0.00850646
NZ_CP009287.1\|WP_020431819.1\|3194365_3195013_-\|fructose-6-phosphate-aldolase	gnl\|CDD\|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	9.58789e-142

>NZ_CP009287.1|WP_025706899.1|3187775_3188261_-|hypothetical-protein
MSNNVKRITAFAAALLLCLAPAAAFAENAAGSTPTAAPGSAVRAEQEHRHPHPPGMDKDFRAGGGHFIINETSKLLEIDRHELVRSLRSGTTLYALAKEKKGWTEEQYIQKLSDAAVMKLEACIKDGRLTQSEADKLKAGLPALLKLGISRMDHFQKSTSR
>NZ_CP009287.1|WP_155990460.1|3187082_3187664_+|phosphatase-PAP2-family-protein
MFVKMDRISGFDNFIIQAVQSAESPALTSLAKGLSLVGSSSLAIGISLLTLVLLYFVLKHRIELILFLAVGAGSQLLNTWMKLWFHRERPNIHRLIEQAGYSFPSGHSMAAFSLYGIIAYLLWRHMRRRSERVLLILFTVLMTGGIGWSRVYLGVHYPSDVIGGYAASGAWMMLCIACFEAYRNSRKSKKSLL
>NZ_CP009287.1|WP_025706896.1|3186677_3186899_-|RNA-chaperone-Hfq
METLKLQERVLNQCISTKVPVTIFTTNGVKMQGLVTSYDAYTITLQGQGDGRQNVLFKSAVSTVVPLKPVSLK
>NZ_CP009287.1|WP_025706895.1|3185402_3186512_+|lactonase-family-protein
MKNTRLLLFTGSYASADESGVQVFEFNGEAGGTLTLLDKVQGITNPTFVNVDAAEGRLYAIGEKANGAGGKEGEVVSFAIDPQDGRLMELNRISTMPAADSGQTTTCHISRDSRNEFIIVCSYHGGLVGLVSLDQEGLPLRLEDTAVHRGQRNLPGQDKPHPHSAIFSPDEKYLFVSDLGLDLIRAYKINRDTKTLEALGDTMLHEGAGPRHFVFHPDGKSAYVINELDSTVTSFLYDSAAGTLQTAATISTLPEDYPAAGNSCAEIALSADGLFLYGSNRGHDSIVVYAVNPATARLTLVEHVSTHGGHPRHFALTPDGAYLIAANRDGNNLVVFSVDRSSGRLSFTGNTAEVSKPVCVKPAYFPSAE
>NZ_CP009287.1|WP_025706894.1|3184848_3185184_-|hypothetical-protein
MSSLLEARNVYEDFEVETDILFFKVGDHDLVIFHGRNYNIKKRMTAEQLNRLVSNPSYYHVYGGCYVNLNKISSIEDDCIYFGEMGLYAKTVRVPRRKQEGIRHLLRSLSS
>NZ_CP009287.1|WP_025706893.1|3183398_3184631_-|peptidylprolyl-isomerase
MDKKDFNENEHLDNNGAPEENSTSDMNERAPEETVSGPGFEPDTAQKAAEVFEQNDAPDSAANVPVMNKVGDGTPPSSPGSKGGRGWMIASIVLAAALIVVLIVQPFQKDDSKVAVASVNGTDITKAQLYDKLVEAGGEATLQNLITSTLVDQEAKKANITVTDADIQAELEDLKTQFGGEEALNNALQQSSMTLDDLKKQMPMQVKIRKLVEPKVKVTEDEISKYYEENKASFNQEEEVRASHILVKTKAEADAIVKQLAGGADFAALAKEKSADTGSKEKGGDLNFFKKGDMVAEFSNAAFKLKVGETSGPVKTDYGYHVIKVTDRKEAHNYTLAEKKEEITKTLKAKKVSEMSSTWLQELNAGAKITNTLTDKPEASPSADASAAPDANKAPDASEAPAATEAPAAK
>NZ_CP009287.1|WP_020426913.1|3183092_3183287_+|hypothetical-protein
MPWNKDDYPDSLKNFMAPVRNKAIEIANALLDEGYEEGRAISIATAQAKEWGENHDKQIRKKNH
>NZ_CP009287.1|WP_025706892.1|3182416_3183016_+|nitroreductase-family-protein
MSKTFLEAVKGRRSIYAISKESPISDAEIQEIVEAAVLHSPTSFNSQSSRAVVLLGDKHDKVWDITADTLRKIVPTEQFEGTAQKLSSFKAGYGTVLFFEDQAVVKHLQENFALYAENFPIWSNQSSGILQFVVWTAFAEAGLGASLQHYNPLIDDEVKATFNIPADWKLIAQMPFGKTVTAPGEKEFQPIEERVKVIK
>NZ_CP009287.1|WP_081758888.1|3180717_3182151_-|metallophosphoesterase
MMKKPHVKGYFSLQKTNIHMITVLLATGFILASCRDTGLSIPDRTAESTVVQAETETAPVSFWVATDTHYLDKDLQDGGAAFQAYVNGGDGKILPYSDELMEALVYDAEQKKPEFLILSGDLTNNGESSSHKKLAEKLKRVEAAGTDVYVIPGNHDLNNPWARSFKADKQIVAEHITPEDFTEMYADFGYTEALSRDKDSLSYLVNAAPGLYLLMIDSSQYANNESYGFPQTDGRILPSTLSWMDDCAKLAAGKHASIITVMHHNLLSHTSMSVAGFKLNNSQETMKTLRRNNLNLVLSGHIHMQDIARDPKSGNDGTAGSGESPVYDIATSAFAVNPHQYGALTFDPVTRAITYHSTSVNVEGWSKANGITDPNLLNFTAYAESVFADQSYNKAMARLKESTFSEREKQSMAEVMAKLNVNYFAGTASDALDEIKAMPGYKLWMGMDGGFMSGYIQSMAADKLLSNVFLKMNLTKP
>NZ_CP009287.1|WP_025706890.1|3179074_3180592_+|copper-amine-oxidase-N-terminal-domain-containing-protein
MKKMKARTKWLLPILALLLILAGCQSVAGLDVNKALLGDLDVKSSESSTTLSVNAVPAAGISAEDQKMVDLINSFSLNISHVKLQDNGNISASGVVGYKQLSIPFTFFMDTTAVVFTAKGAKQPFYYPLEGYEESLGLKGLDQNKATELSKLLTQFVVKNLPNPGAISVSSVNESVYGEQLSLTKLHTEITGEEMPALVKSFLKSISKDTEGFTAFIGSLYDYLYPLLEANGIGANELSDLGLGDIPLGDKEGVVTVAHDAAKLAVDALLLVYDKQLDNLYSSTPELKTVLSKDTKLNVDLFVDNGFHIRKQNIDLNVALPASEDLPLQSISLKLGTQTWNVNGPVTADRISTDGALNMSSTELTPGQTLRSFEQGSDIYSLLKNDMGITSKSLVIAPDDDYYYPIVEGGTTYVPLRYLAEDLDAAVEWDGANRAIKVTDDVYGDQLVFKIGSDKVQINGAAVKLPQPVFVDEYGDAYVPLRLLAEALHAKVKTDEDGYIYIDRP
>NZ_CP009287.1|WP_025706900.1|3188565_3189597_+|aromatic-acid-exporter-family-protein
MAFGARILKTGLAVTLALYLSALLQFSSPVGAAIAAIFAMQPSIYRSWRYFLDQIQTSTIGAVLALLGGMLLSNEPIAVGLVCILVIMISMKMKRADTIGLTLVTVISVMEASGQWEFALTRFLLTLTGIVAAFIINIAVFPPKPRKQYIEQIENVFGSLSLLLRTAVSHEMKESVFRDEKNALEGSIRSLADKYALFEEEQKQLRRAKYSQTRQMVVYKNLLASLQKGFEVLEAVDRHYFQAERTGKTDELFDRHLEQLIKYHETILLKFEDKLKPGANDMDPLAEDNDRFLQAAINGYDAEKSGQLRLSVVAAAIYDYGYQLERLDKVADQINRLSADEKE
>NZ_CP009287.1|WP_025706901.1|3189873_3192231_+|UvrD-helicase-domain-containing-protein
MEKHDSEWEEEQKRVNGITKLLSAHIRRLSEELGLHRSDVVDMRKDFWEEVTVNFSSPDDLGETSTSLRQQAQILNERERHHLQSSKALKKYRKLVVSPYFGRIDFKETPDAETERIYLGIGSLMEDNGSFLIYDWRAPISSLYYDGAPGPAAYETPGGLVSGTMELKRQFVIDNGTIEVMFDTGVTIGDELLQQVLSHSADDRMKSIVATIQKEQNAIIRNDRSRMLVVQGAAGSGKTSAALQRVAYLLYKYREVLQADQMLLFSPNPLFNSYVSTVLPELGEENMQQTTFQMYLEHRLGQEFELEDVFSQTESLLNAPEGPEAATRRAGIAYKSSVAFLDVIRRYVNLLEHEGMLFKPLVFQGRTVVSKEEMEQKFYSFDNSIKLANRIDLMTSWLLKKTAAFSVEERESKWVEDQIELLDSSDYQRAYNMLRRKGGGRNDSFDDFDMEKTVLARYIVSQRLKPLRGWTKRGRFVDVKGLYSLLFADRNLMERLGNGRALPEEWGSICRQTVASLSRNELAYEDATPFLYLKELSQGFRTNTQIRHVIVDEVQDYSPFQLEFMRRLFPRAKMTVLGDLNQAIYAQGEVLGDLGGLVSIYGKENTEVISLTRSYRSTYEIVEFTRSMIPGGEKIVPFNRRGESPLLTVVDNEEGLLGSIEQDVLNLHSMGYHYVAVICKTAEESARVHAELQNRLPVRLVTKDTPNFQKGTLVLPAYLAKGVEFDAVIIYDGSEAKYGRESERKLFYTACTRAMHLLHIYSLGQPNHFLPAVVRESVTAGVVQR
>NZ_CP009287.1|WP_025706902.1|3192511_3193732_-|MFS-transporter
MNHSSERLWTPSFITLTLCNLLLFMGLQMTLSTLPAYAEGTLQASSVQVSLVTSLFALSAIASRLFSGKAMEKGGRNLLIFLGLSVSITAVAGYYWAGSILALLLLRMLFGIGFGMASTAFPTMASDIIPVRRMGEGMGYFGLSTSLAMSAGPLIGLSLLQGPGFGSLLICTAAAMVLILPLSYRLATKLPAHHKEPSAPPVSELKGGAFRRLFIPCLLNFLLSVSYGGLLGFLALYGAEAHLEHIAYFFLFNAAAIVVVRPLSGKIYDRFGPPALLIPGSLFIVGGLLLLSFASSTAALFPAAICYGIGFGSMQPALQTWMIQSVEPRQRGMANGMFFNSLDLGVAIGTMILGSIALYTSYGVMYRYSALAPVLLLLIYTSLLLAKRYNRPKSAPKNFSSQSAAK
>NZ_CP009287.1|WP_025706903.1|3193743_3194187_-|MarR-family-transcriptional-regulator
MPHTSPQEFLGFLLGSTHRRISNAFARVLKPYDITPEQWSILLMICDREGINQKDVAAAAAKDQPTTARIVELLQKKGFIHKTTSPADRRAFQLYATETGKSLIERTVSLEQQTIAAAVNGLRPEQIEDLRSMLELIYHNTGNTNQE
>NZ_CP009287.1|WP_020431819.1|3194365_3195013_-|fructose-6-phosphate-aldolase
MKFFLDTGNIEEIKRITRLGLVDGVTTNPSLIAKEGRLFKDVIKEIVAIVPGPVSAEVIGLKAEEMLKEAYEIAEWAPNVVIKLPMTEDGLEACYELTKKGIKTNVTLIFSAAQGLMAAKAGATYISPFVGRLDDIGVDGMKLISDLKTILTNYGLQSEIIAASIRNIAHVEQAAIAGAHIATIPGSLLPSLWKHPLTDNGIERFLKDWEKVPQA
>NZ_CP009287.1|WP_025706904.1|3195245_3195713_+|hypothetical-protein
MFMVFAGVIVFLLFAAGVMAYQNCRLIAQQEAGDSAGRISSLMYSVYYQSFSYNEERPEAVPLFQFTVRPPAEGQRASGEIDKTIALCRVPAGSGEMALSDAQNWMLGSIRQSALRGERIIPASFKDKAAGKGEQELIFRLETAVKEETGHADHH
>NZ_CP009287.1|WP_025706905.1|3195696_3196260_+|macro-domain-containing-protein
MPIIINHVAVSACQGDITSWQGDMIVNASNSGLFGGGGVDGAIHRAGGPQIAGECAAIRRKQGGILPGEAAVTSAGKLPLLGIIHTVGPIWKGGDAGEISTLARCYLSSLDAACTQGAQSIAFPNISTGVYNFPKALACQTALRTVVEYVKRRDSGGLPLKRIEFICFEKDNADLYEEMLKRYGDIY
>NZ_CP009287.1|WP_036705838.1|3196316_3196793_+|GNAT-family-N-acetyltransferase
MISNIEVSFTVVEPENRDLRALIARLDDELKARYPHETIYVVDFSDPKVREMTFVVAYAGDKPVGCGGLRPLDPDSSVMELKRFYVDPDTRKQGIANRMLLDLEQKARAAGCIEIRLETGIKQPEAIALYEKHGYRPIDLFGPYIGDPDSLCYGKSLS
>NZ_CP009287.1|WP_025706907.1|3196801_3196999_-|hypothetical-protein
MRTEQQIQSKINELTLQKRSLESRLAPLPDGSPQREPLNAQLTRLEDMLLMLEWVLDAPAGKYHA
>NZ_CP009287.1|WP_025706908.1|3197082_3197763_+|ribose-5-phosphate-isomerase-RpiA
MNVKQLAAEKAVEYVVDGMKVGLGTGSTAYWAIRKLGERVQEGLKITAVATSVASEEQARELGIPLVGFGDIDGLDLTIDGADELNHDLELIKGGGGALLREKIVARGSKQMIVVADESKAVDTLGQFPLPVEIVPFAWEWTVAELAKLGCTVELRSSGDGLYKTDNGNYIADCRFGAIASASELAGSLQNITGVVEHGLFIGIAAMAIIGKQDGSIEIIEREYGE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_20

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_20

3198897-3199080

Orphan

Consensus_repeat	Method
GCAGAAATGCCGTTGTTGAAGAGCCGGAGGC	CRT

3 spacers

The CRISPR arrays of NZ_CP009287_20

>merge|NZ_CP009287|20|3198897-3199080|CRT
GCAGAAATGCTGTTGTTGAAGAGCCGGAGGCAGGTTTGCCCTGAAAGAACGGCAGAAATGCCGTTGTTGAAGAGGCGTAGGCGGGTTTAGCTGGTAACAACAGCAGAAATGCCGTTGTTACAGCGCCGGAGGCAGGTTTGCCATGAAAGAACGGCAGAAATGCCGTTGTTGAAGAGCCGGAGGC

>NZ_CP009287|20|3|3198897-3199080|CRT
GCAGAAATGCTGTTGTTGAAGAGCCGGAGGC	AGGTTTGCCCTGAAAGAACG
GCAGAAATGCCGTTGTTGAAGAGGCGTAGGC	GGGTTTAGCTGGTAACAACA
GCAGAAATGCCGTTGTTACAGCGCCGGAGGC	AGGTTTGCCATGAAAGAACG
GCAGAAATGCCGTTGTTGAAGAGCCGGAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025706905.1\|3195696_3196260_+\|macro-domain-containing-protein	unknown	unknown	gnl\|CDD\|394878
NZ_CP009287.1\|WP_025706903.1\|3193743_3194187_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009287.1\|WP_025706915.1\|3204822_3205494_-\|tetratricopeptide-repeat-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP009287.1\|WP_025706910.1\|3198319_3198760_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP009287.1\|WP_025706917.1\|3207484_3207697_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025706912.1\|3199755_3202920_+\|MMPL-family-transporter	unknown	unknown	gnl\|CDD\|225272
NZ_CP009287.1\|WP_167337226.1\|3208122_3208287_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025706913.1\|3203109_3203643_+\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|213752
NZ_CP009287.1\|WP_025706907.1\|3196801_3196999_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025706904.1\|3195245_3195713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025706914.1\|3203639_3204749_+\|DUF4179-domain-containing-protein	unknown	unknown	gnl\|CDD\|379369
NZ_CP009287.1\|WP_036705838.1\|3196316_3196793_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009287.1\|WP_025706916.1\|3205928_3206930_+\|aldo/keto-reductase	unknown	unknown	gnl\|CDD\|381319
NZ_CP009287.1\|WP_025706911.1\|3199306_3199759_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009287.1\|WP_020431819.1\|3194365_3195013_-\|fructose-6-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234947
NZ_CP009287.1\|WP_025706918.1\|3208900_3209569_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025706908.1\|3197082_3197763_+\|ribose-5-phosphate-isomerase-RpiA	unknown	unknown	gnl\|CDD\|234816
NZ_CP009287.1\|WP_162165090.1\|3197731_3198259_+\|VanZ-family-protein	unknown	unknown	gnl\|CDD\|377417
NZ_CP009287.1\|WP_025706902.1\|3192511_3193732_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|341042
NZ_CP009287.1\|WP_167337225.1\|3207136_3207295_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025706905.1\|3195696_3196260_+\|macro-domain-containing-protein	gnl\|CDD\|394878	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family. Macrodomains are found in a variety of proteins with diverse cellular functions, as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Macrodomains can recognize ADP-ribose (ADPr) in both its free and protein-linked forms, in related ligands, such as O-acyl-ADP-ribose (OAADPr), and even in ligands unrelated to ADPr. This family includes eukaryotic macrodomain proteins such as human MacroD1 and MacroD2, and bacterial proteins such as Escherichia coli YmdB; these have been shown to be O-acetyl-ADP-ribose (OAADPr) deacetylases that efficiently catalyze the hydrolysis of OAADPr to produce ADP-ribose and free acetate. OAADPr is a sirtuin reaction product generated from the NAD+-dependent protein deacetylation reactions and has been implicated as a signaling molecule. By acting on mono-ADP-ribosylated substrates, OAADPr deacteylases may reverse cellular ADP-ribosylation.	3.68966e-67
NZ_CP009287.1\|WP_025706903.1\|3193743_3194187_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	3.12752e-18
NZ_CP009287.1\|WP_025706915.1\|3204822_3205494_-\|tetratricopeptide-repeat-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	2.82471e-05
NZ_CP009287.1\|WP_025706910.1\|3198319_3198760_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	1.12735e-10
NZ_CP009287.1\|WP_025706912.1\|3199755_3202920_+\|MMPL-family-transporter	gnl\|CDD\|225272	COG2409, COG2409, Predicted drug exporters of the RND superfamily [General function prediction only].	1.15972e-91
NZ_CP009287.1\|WP_025706913.1\|3203109_3203643_+\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|213752	TIGR02954, RNA_polymerase_ECF-type_sigma_factor, RNA polymerase sigma-70 factor, TIGR02954 family. This group of sigma factors are members of the sigma-70 family (TIGR02937). They and appear by homology, tree building, bidirectional best hits and one-to-a-genome distribution, to represent a conserved family. This family is found in certain Bacillus and Clostridium species.	2.1019e-38
NZ_CP009287.1\|WP_025706902.1\|3192511_3193732_-\|MFS-transporter	gnl\|CDD\|341042	cd17489, MFS_YfcJ_like, Escherichia coli YfcJ, YhhS, and similar transporters of the Major Facilitator Superfamily. This subfamily is composed of Escherichia coli membrane proteins, YfcJ and YhhS, Bacillus subtilis uncharacterized MFS-type transporter YwoG, and similar proteins. YfcJ and YhhS are putative arabinose efflux transporters. YhhS has been implicated glyphosate resistance. YfcJ-like arabinose efflux transporters belong to the bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.83609e-82
NZ_CP009287.1\|WP_025706914.1\|3203639_3204749_+\|DUF4179-domain-containing-protein	gnl\|CDD\|379369	pfam13786, DUF4179, Domain of unknown function (DUF4179).	2.83171e-13
NZ_CP009287.1\|WP_036705838.1\|3196316_3196793_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	5.58598e-20
NZ_CP009287.1\|WP_025706916.1\|3205928_3206930_+\|aldo/keto-reductase	gnl\|CDD\|381319	cd19093, AKR_AtPLR-like, Arabidopsis thaliana pyridoxal reductase (PLR) and similar proteins. Arabidopsis thaliana PLR (EC 1.1.1.65) is the prototype of this family. It catalyzes the reduction of pyridoxal (PL) with NADPH and oxidation of pyridoxine (PN) with NADP(+), and is involved in the PLP salvage pathway.	8.96083e-98
NZ_CP009287.1\|WP_025706911.1\|3199306_3199759_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.45142e-22
NZ_CP009287.1\|WP_020431819.1\|3194365_3195013_-\|fructose-6-phosphate-aldolase	gnl\|CDD\|234947	PRK01362, PRK01362, fructose-6-phosphate aldolase.	9.58789e-142
NZ_CP009287.1\|WP_025706908.1\|3197082_3197763_+\|ribose-5-phosphate-isomerase-RpiA	gnl\|CDD\|234816	PRK00702, PRK00702, ribose-5-phosphate isomerase RpiA.	3.91246e-115
NZ_CP009287.1\|WP_162165090.1\|3197731_3198259_+\|VanZ-family-protein	gnl\|CDD\|377417	pfam04892, VanZ, VanZ like family. This family contains several examples of the VanZ protein, but also contains examples of phosphotransbutyrylases.	2.72753e-20

>NZ_CP009287.1|WP_025706910.1|3198319_3198760_+|GNAT-family-N-acetyltransferase
MLVDLKQRTDTDEVKELLAYAVIDEPDALWRTSVEYVRKAALQLYGWEEEGLLVGLVGFEETEDGSLEIRHIAVLPENRGKGYARGIILELLAARNPRYLLAETEDEIAADFYRNLGFMVYSLGENPAGIEMFRCVYEVEEDEDDE
>NZ_CP009287.1|WP_162165090.1|3197731_3198259_+|VanZ-family-protein
MKLLSVNTASSSRKQSKPRQRGGKRRTPVQPRGIGRAMLLILLIAYSSALVYWMFIGFGRSVHTEGPFRYNLEPLRTIKLYFDLDNGVSFLGRLINLLGNVIVFVPFGFLLPLLRRSLRSVLLLLFVSALGILFLETVQMLLRVGSFDIDDVLLNLAGVLTGYIVLWIVFLMGKR
>NZ_CP009287.1|WP_025706908.1|3197082_3197763_+|ribose-5-phosphate-isomerase-RpiA
MNVKQLAAEKAVEYVVDGMKVGLGTGSTAYWAIRKLGERVQEGLKITAVATSVASEEQARELGIPLVGFGDIDGLDLTIDGADELNHDLELIKGGGGALLREKIVARGSKQMIVVADESKAVDTLGQFPLPVEIVPFAWEWTVAELAKLGCTVELRSSGDGLYKTDNGNYIADCRFGAIASASELAGSLQNITGVVEHGLFIGIAAMAIIGKQDGSIEIIEREYGE
>NZ_CP009287.1|WP_025706907.1|3196801_3196999_-|hypothetical-protein
MRTEQQIQSKINELTLQKRSLESRLAPLPDGSPQREPLNAQLTRLEDMLLMLEWVLDAPAGKYHA
>NZ_CP009287.1|WP_036705838.1|3196316_3196793_+|GNAT-family-N-acetyltransferase
MISNIEVSFTVVEPENRDLRALIARLDDELKARYPHETIYVVDFSDPKVREMTFVVAYAGDKPVGCGGLRPLDPDSSVMELKRFYVDPDTRKQGIANRMLLDLEQKARAAGCIEIRLETGIKQPEAIALYEKHGYRPIDLFGPYIGDPDSLCYGKSLS
>NZ_CP009287.1|WP_025706905.1|3195696_3196260_+|macro-domain-containing-protein
MPIIINHVAVSACQGDITSWQGDMIVNASNSGLFGGGGVDGAIHRAGGPQIAGECAAIRRKQGGILPGEAAVTSAGKLPLLGIIHTVGPIWKGGDAGEISTLARCYLSSLDAACTQGAQSIAFPNISTGVYNFPKALACQTALRTVVEYVKRRDSGGLPLKRIEFICFEKDNADLYEEMLKRYGDIY
>NZ_CP009287.1|WP_025706904.1|3195245_3195713_+|hypothetical-protein
MFMVFAGVIVFLLFAAGVMAYQNCRLIAQQEAGDSAGRISSLMYSVYYQSFSYNEERPEAVPLFQFTVRPPAEGQRASGEIDKTIALCRVPAGSGEMALSDAQNWMLGSIRQSALRGERIIPASFKDKAAGKGEQELIFRLETAVKEETGHADHH
>NZ_CP009287.1|WP_020431819.1|3194365_3195013_-|fructose-6-phosphate-aldolase
MKFFLDTGNIEEIKRITRLGLVDGVTTNPSLIAKEGRLFKDVIKEIVAIVPGPVSAEVIGLKAEEMLKEAYEIAEWAPNVVIKLPMTEDGLEACYELTKKGIKTNVTLIFSAAQGLMAAKAGATYISPFVGRLDDIGVDGMKLISDLKTILTNYGLQSEIIAASIRNIAHVEQAAIAGAHIATIPGSLLPSLWKHPLTDNGIERFLKDWEKVPQA
>NZ_CP009287.1|WP_025706903.1|3193743_3194187_-|MarR-family-transcriptional-regulator
MPHTSPQEFLGFLLGSTHRRISNAFARVLKPYDITPEQWSILLMICDREGINQKDVAAAAAKDQPTTARIVELLQKKGFIHKTTSPADRRAFQLYATETGKSLIERTVSLEQQTIAAAVNGLRPEQIEDLRSMLELIYHNTGNTNQE
>NZ_CP009287.1|WP_025706902.1|3192511_3193732_-|MFS-transporter
MNHSSERLWTPSFITLTLCNLLLFMGLQMTLSTLPAYAEGTLQASSVQVSLVTSLFALSAIASRLFSGKAMEKGGRNLLIFLGLSVSITAVAGYYWAGSILALLLLRMLFGIGFGMASTAFPTMASDIIPVRRMGEGMGYFGLSTSLAMSAGPLIGLSLLQGPGFGSLLICTAAAMVLILPLSYRLATKLPAHHKEPSAPPVSELKGGAFRRLFIPCLLNFLLSVSYGGLLGFLALYGAEAHLEHIAYFFLFNAAAIVVVRPLSGKIYDRFGPPALLIPGSLFIVGGLLLLSFASSTAALFPAAICYGIGFGSMQPALQTWMIQSVEPRQRGMANGMFFNSLDLGVAIGTMILGSIALYTSYGVMYRYSALAPVLLLLIYTSLLLAKRYNRPKSAPKNFSSQSAAK
>NZ_CP009287.1|WP_025706911.1|3199306_3199759_+|MarR-family-transcriptional-regulator
MKGEPQHWIDRYVDAYMGVTRQINAQIRDNMAEGLTNDQFLIMRLINSQELCTSTFLAEAVAVGKSSITAIINRLAEAEFIDRTRDENDRRQVYLSLTEKGRSTYHAAEKQVQEVISPYFSHFEEQDIEKFITMFEKLALLMQETGGRNN
>NZ_CP009287.1|WP_025706912.1|3199755_3202920_+|MMPL-family-transporter
MKTILKARWAIIAVWLTVAVVLFLIAPGMSDLVREKGQISVPDGYTSTRASEIMKEVADAKGGETLHQVALVFNKPDGLGAEDTESIKQGVEKLVAEKDELKIDSITDPFSQAELKDTLIAKDGKTIMVALMVSGGEEAVKQLPDQVDKLLSGVSADHYLTSEGLITEDTIVSSEAGLKKSEYITVIFILLILFVVFRSFVAPFVPLLTVGLSYIVSQSIVAFLVDRFDFPLSTFTQIFMVAVMFGIGTDYCILLISRFKEELASAEDTRSAIISTYRKAGGTVFYSGLAVFVGFLAIGLSKFMLYRSAVAVAVGIAVMLLALVTVVPFFMAVLGKKLFWPSSSKLEHSESRIWGAAGSFSLKRPWAALLIVAVVVVPFLLTYSGKLSFNSMDEIGPGYASVKGFNIISDSFGPGESMPGKIVVKNDDRMDTSEYMGLAEKISRELEKVDGVKAVRSMSRPTGEQINDFLIPTQVATLTDGLSQSNEGLTKIQSGLEEASKQLKGNEPKLNEAVSGSAKLTEGTAELKKGIDALGDGLSRIESGIKSGSAGAGEIKAGLAQAAASAQQLADANASLLAGYKKIGAGLTALDGGLGQLQTQLQGVASALNGLDASFTGLEAAHPDLLQDVNYQTIKGTVAQSGSGAAKLAGGLGQISGQLKGAAAGLNEANAGYTKAAAGQTALAQGLDKLVAGIGQLQSGLNQAAAGQGQIVDKIPGITSGLDQLQGGQQQLADGFGQLTGQIGQLTDGLSDSADGLKQITGGLNSAQDYLKQIQDAKDNELSGFLVPEEALKEDGIQKVFDNYLSSDRKVMTLDVVFAANPYSAKAIDSMGDIQAAVDRAVKGTKLENAETAISGVTSTYSDLQKISNEDYTRTVVLMLGGIFIILVVLLRSIIMPLYLIVSLLITYFTALGVTEAIFVHLLNYSGITWTTPFFSFVMLIALGVDYSIFLMDRFNENKTWDVREAILHAMRNMGTVILSAVVILGGTFASMYPSGVLSMMQIATVVLSGLALYALVFLPFFVPVMVRMFGRANWWPFSGSASDDTAKAKTLDM
>NZ_CP009287.1|WP_025706913.1|3203109_3203643_+|sigma-70-family-RNA-polymerase-sigma-factor
MNNRLEKQVRRAQRGDNEAFIELIQEMELQMYQMAKSIVRKDEDCADAMQESTLKAFKAISTLKQPEFFRTWLFRILINECNMILRRRVQTVTINEMPVTPKERPSMAERLDLRTAVHQLEEIPRTLVILHYYQGFPLQHIADLLEMSEGAVKTRLHRARKTLYEWLVDPVEREMNG
>NZ_CP009287.1|WP_025706914.1|3203639_3204749_+|DUF4179-domain-containing-protein
MNPKHLDQELDDLRGDKAEEVPELVRSRMNSVYQELKGSGEKVTPGRRRRSWWQRLIITAACAAVAVMLMIGLGFISPAMAETLKQLPFMKSVFQLAGDSGLKQASITGVTSDVQQSVTHGDLTLSISELMYDGSRLSLVLTKKEPDGGNPSFYEWWNARDMQLGPANNIDFYINGELANTAWGMAPGGEAAPESLIVTALESPDLHVPEAFNFKMVVFIPDVGQSFTFELPVKKKTLESVVLTPEAAKTFDHINLHIKRIEISQTTIRLITEIKGAPGQDIKALQEAIPDKYKTHGILTLLFDLLNDQGQTATMIGGNGNGQGNTLSGSSSYEPFAAMPKSVVIKPYISTQDGEKLYISELEMTVPVQ
>NZ_CP009287.1|WP_025706915.1|3204822_3205494_-|tetratricopeptide-repeat-protein
MLKFFGFLLLYRLVGNPFLALFILLVILYFLDRRYVGILPSFTKPFRRSRQISKLRTTISLNPNDVSAKFDLARLLIERKRYSESKELLVQIADRYEQSAEYWVELGYVNLKLGHLPEGEAQMLQGLEINRKAQYGQPYLRLAETFRNIDHDKALHYVTQFQEIQSSSSEAYYLAGSMYKALGRNEDAKRAFNESTAIYRSLPKYKKRQERGWALRSYFAKLR
>NZ_CP009287.1|WP_025706916.1|3205928_3206930_+|aldo/keto-reductase
MESAMAAAGLRPLGQSTLSVSPLGLGCWQFSRGKGIVGKYWSNLEDADILEIVRVSLEGGMNWVDTAEVYGGGKSEEALAHVLDQLKREGSPYATPLIATKWWPLFRTATSITSTIEERLRCLGGRDIDLYQIHQPFSLSSIASEMKAMAGLVQAGKIRNIGVSNYSAKQMIEAHRLLRQYGLNLVSNQVKYNLLDRKIDRNGTMEAAKALGISIIAYSPLQQGILTGRFHKDPVQIRAVSRVRRIQSGLDDKSLARSKPVIDSLTVLADKYGATPGQIALNWLIHYNGETVVAIPGASKVRHAQENIGAMDFRLGKNELEHLNEASWSALKS
>NZ_CP009287.1|WP_167337225.1|3207136_3207295_+|hypothetical-protein
MSMTVHNLMAFNHQYFRPQPVADPKPQRSDDKTLSFQEILNEKLKAHNGMKK
>NZ_CP009287.1|WP_025706917.1|3207484_3207697_-|hypothetical-protein
MPINRPLLTDSDFQEAVDRKLPVRVFEDDHLVNSGATVIRFTDSDVVIQSRVSDLAYYSRSSCQFYEVRP
>NZ_CP009287.1|WP_167337226.1|3208122_3208287_-|hypothetical-protein
MNKNKRLISSAVIVICFAVAFGFALHNFALGIALGIVFGVAFSQTGKPKTPKDK
>NZ_CP009287.1|WP_025706918.1|3208900_3209569_+|hypothetical-protein
MAGDMFGAVNALFSGFAFAGLIYTIAIQRQELQEQQRAISMQTEELTLQRKAIGMQNEELRMQREETTRSTDQLESQRKLLNMQISMTTVNELIKMKNKRIEYIGLEINGNVEKGIRALTALVKRHISINRPITEDAPILQSYYNSFFYILQFIKDSDISAEQKKVLGNLLSMDTGDSEIYIIYSAFANDQHKLGILKEFDFLERYRNIQLNLKVNTFKPSN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_21

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_21

4389861-4389934

Orphan

Consensus_repeat	Method
AAGTGGAAAAAGGATAACTAATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_21

>merge|NZ_CP009287|21|4389861-4389934|CRISPRCasFinder
AAGTGGAAAAAGGATAACTAATTTGCCCCATTCTCCTGTTCTCCGCAGGTTAAGTGGAAAAAGGACAACTAATT

>NZ_CP009287|21|17|4389861-4389934|CRISPRCasFinder
AAGTGGAAAAAGGATAACTAATT	TGCCCCATTCTCCTGTTCTCCGCAGGTT
AAGTGGAAAAAGGACAACTAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_155990501.1\|4390774_4390882_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708782.1\|4383946_4384714_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367466
NZ_CP009287.1\|WP_042267019.1\|4382833_4383868_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238558
NZ_CP009287.1\|WP_025707674.1\|4402879_4403884_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340424
NZ_CP009287.1\|WP_025707671.1\|4398142_4399516_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP009287.1\|WP_025708787.1\|4387559_4388024_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009287.1\|WP_025707669.1\|4395284_4396247_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP009287.1\|WP_025708788.1\|4388031_4388883_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042267017.1\|4381177_4382797_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238558
NZ_CP009287.1\|WP_025708790.1\|4388861_4389665_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_CP009287.1\|WP_025708785.1\|4386199_4387225_-\|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|130256
NZ_CP009287.1\|WP_025707667.1\|4393393_4394401_-\|zinc-binding-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176217
NZ_CP009287.1\|WP_025707672.1\|4399729_4401664_-\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708777.1\|4380455_4381085_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP009287.1\|WP_025708784.1\|4385390_4386203_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|366444
NZ_CP009287.1\|WP_025708775.1\|4378144_4380463_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|226951
NZ_CP009287.1\|WP_025707670.1\|4396276_4397872_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270301
NZ_CP009287.1\|WP_025707675.1\|4403880_4404570_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|381143
NZ_CP009287.1\|WP_025707673.1\|4401660_4402413_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP009287.1\|WP_025707668.1\|4394427_4395291_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025708782.1\|4383946_4384714_-\|hypothetical-protein	gnl\|CDD\|367466	pfam03370, CBM_21, Carbohydrate/starch-binding module (family 21). This family consists of several eukaryotic proteins that are thought to be involved in the regulation of glycogen metabolism. For instance, the mouse PTG protein has been shown to interact with glycogen synthase, phosphorylase kinase, phosphorylase a: these three enzymes have key roles in the regulation of glycogen metabolism. PTG also binds the catalytic subunit of protein phosphatase 1 (PP1C) and localizes it to glycogen. Subsets of similar interactions have been observed with several other members of this family, such as the yeast PIG1, PIG2, GAC1 and GIP2 proteins. While the precise function of these proteins is not known, they may serve a scaffold function, bringing together the key enzymes in glycogen metabolism. This family is a carbohydrate binding domain.	7.13369e-14
NZ_CP009287.1\|WP_042267019.1\|4382833_4383868_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238558	cd01138, FeuA, Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	6.40586e-60
NZ_CP009287.1\|WP_025707674.1\|4402879_4403884_-\|sensor-histidine-kinase	gnl\|CDD\|340424	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.	1.48223e-47
NZ_CP009287.1\|WP_025707671.1\|4398142_4399516_-\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.07282e-33
NZ_CP009287.1\|WP_025708787.1\|4387559_4388024_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	9.65798e-12
NZ_CP009287.1\|WP_025707669.1\|4395284_4396247_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	2.70568e-132
NZ_CP009287.1\|WP_042267017.1\|4381177_4382797_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238558	cd01138, FeuA, Periplasmic binding protein FeuA. These proteins have predicted to function as initial receptors in ABC transport of metal ions in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.	4.24153e-30
NZ_CP009287.1\|WP_025708790.1\|4388861_4389665_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	9.01344e-97
NZ_CP009287.1\|WP_025708785.1\|4386199_4387225_-\|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein	gnl\|CDD\|130256	TIGR01188, drrA, daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	5.95037e-125
NZ_CP009287.1\|WP_025707667.1\|4393393_4394401_-\|zinc-binding-alcohol-dehydrogenase	gnl\|CDD\|176217	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	1.63971e-72
NZ_CP009287.1\|WP_025708777.1\|4380455_4381085_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	5.15714e-52
NZ_CP009287.1\|WP_025708784.1\|4385390_4386203_-\|ABC-transporter-permease	gnl\|CDD\|366444	pfam01061, ABC2_membrane, ABC-2 type transporter.	4.31612e-22
NZ_CP009287.1\|WP_025708775.1\|4378144_4380463_+\|hypothetical-protein	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	5.15038e-31
NZ_CP009287.1\|WP_025707670.1\|4396276_4397872_-\|extracellular-solute-binding-protein	gnl\|CDD\|270301	cd13583, PBP2_AlgQ_like_4, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	1.90206e-110
NZ_CP009287.1\|WP_025707675.1\|4403880_4404570_-\|response-regulator-transcription-factor	gnl\|CDD\|381143	cd18159, REC_OmpR_NsrR-like, phosphoacceptor receiver (REC) domain of Streptococcus agalactiae NsrR-like OmpR family response regulators. Streptococcus agalactiae NsrR is a lantibiotic resistance-associated response regulator and is part of the nisin resistance operon. It is a member of the NsrRK two-component system (TCS) that is involved in the regulation of lantibiotic resistance genes such as a membrane-associated lipoprotein of LanI, and the nsr gene cluster which encodes for the resistance protein NSR and the ABC transporter NsrFP, both conferring resistance against nisin. This subfamily also includes Staphylococcus epidermidis GraR, part of the GraR/GraS TCS involved in resistance against cationic antimicrobial peptides, and Bacillus subtilis BceR, part of the BceS/BceR TCS involved in the regulation of bacitracin resistance. Members of this subfamily belong to the OmpR family of DNA-binding response regulators, which contain N-terminal receiver (REC) and C-terminal DNA-binding winged helix-turn-helix effector domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.53868e-60
NZ_CP009287.1\|WP_025707673.1\|4401660_4402413_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	6.21522e-108
NZ_CP009287.1\|WP_025707668.1\|4394427_4395291_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.31552e-65

>NZ_CP009287.1|WP_025708790.1|4388861_4389665_-|undecaprenyl-diphosphate-phosphatase
MTDVIKAIILGVIEGLTEFLPVSSTGHLILAGNLLSFEGDAAITFKIVIQLGAVMAVLILYWRRYLAIGSNLIRMDFSQSKGLNVIHMILAMLPALILYLLFKDIIKSQLFGPTPVLIGLVAGGLLMIIAARSRKTETADTIDGINYKQAFGIGLFQCLALWPGFSRSGSTISGGLLLGTSQKAAADFTFLISVPVMFGASLLDLYDSRDLLNSDNIILMLIGFTTSFLVAMIAVVTFIKLIKRLRLEWFALYRFVLAALFYLIVIL
>NZ_CP009287.1|WP_025708788.1|4388031_4388883_+|hypothetical-protein
MVLLLVILAGTAIGVTVFFKIPYSKTAAEFQRTADHYLTTPATLNDVFTSEDWKLLPYPVRKYFETSGWAGARKMSSMKAVFKGVNFILSPKKPAIQIDYTQYNFSEHPIRIALIKTSMYGIPFQGLDTYAEGKGSMKGVLAKMFTLFNQQGGEMDQACLVTFLSEALLLPSAAIQSCITWEPIDDTHAGATISCYGITARGIFSFSSNGECLSFTTDDRTAIGMDGSKQRVGWSALMKDYQRIDGIRQPTHLQAVWHYDSGDLVYFDSRNFRMEYSYNMTIK
>NZ_CP009287.1|WP_025708787.1|4387559_4388024_+|MarR-family-transcriptional-regulator
MDETEQQAYILGAVLTLANRLQVLGDQLDDQMTMKQWLLIAVILKSSSPAPTLSEVSEMIGSSRQNVKKMALLLEQQGFVALTKDSRDARVLRVQLTDKCRVYFAGRSEREGHFMKALFQSFDAELTRGLFHGLTRLTENIARMETDTSDPEKE
>NZ_CP009287.1|WP_025708785.1|4386199_4387225_-|daunorubicin-resistance-protein-DrrA-family-ABC-transporter-ATP-binding-protein
MSQIKKQPLQSKDWAIEAHGLVKVFGDNRAVDGVDLQVATGSIYGVLGPNGAGKTTAIRMLATLLRPDGGSAKVFGHDVVKEPQIVRQLIGVTGQYASVDESLSATENLVIFSRLLGLGRAEARRKAEELLEEFGLTEAAKRPLKNFSGGMRRRLDLAASLIAQPPLIFLDEPTTGLDPRTRNQMWDTIRRLIQSGSTVLLTTQYLEEADQLADRIAVIDHGHVVAEGTVDELKSSVGTSSLQLRVENLRDIGLARQTVERVLRVPTSISAEAAKITAPLASADRVTDLLIALREAGISLAELSVQKPTLDEVFLSITGHGVEEKSAPASAKSLQVEGQTV
>NZ_CP009287.1|WP_025708784.1|4385390_4386203_-|ABC-transporter-permease
MSTMIKPGAQRQLKNHTSFGQSVRNSLTMAYRGLLKIKRTPEQLFDVTFQPIIFTLMFTYIFGGAISGDVQNYLPMIIPGILVQTVITTSIVTGVQLREDMEKGVFDRFKSLPISRIAPLAGALLADTVRYTIATVLTFAMGYVMGLRPEGGLGHVAMAGILVIICSWAISWIFAFFGVIARTASSVQGISMIVLFPLTFLSNAFVPVDTMPDWLQWFVKMNPISHLVTAVRNLVNLGTMGSDMVFSLVGAAVIVAVFAPITVRAYMRRT
>NZ_CP009287.1|WP_025708782.1|4383946_4384714_-|hypothetical-protein
MKAIKKLFAGLMMFTLIFGVSFVGSAFASGDEVKLIDSDVSIIYKPGYVGFSGNVDVANLGPVKNVTIHYTTDNTTWYNTSANYVGPSDGTREKWHFGISRTDASTDHNELKNLSFIKFAIEYEVNGQVYWDNNGGANYYNEVNHNVPLSSVILGAPNVVNAKGTLSNGEFSGVIYVKNLDPTKTVKVTYTTDNWATTQEGFATYNGSLNNFNSVERWSYSINVPGATDVKYKISYTAGGQTYLDNNYGHNYEAN
>NZ_CP009287.1|WP_042267019.1|4382833_4383868_+|ABC-transporter-substrate-binding-protein
MIIILHKEELKLINVQHPGLKRRHWFIFPPLLTILLLVSACGNNTSEGGNANTRNAAAAPAASEQPVQKGEPAAFKTVTTINGEIKIPVEPKRIVAEEYLGSLIALDTIPVGAPGLTLENMYFKEALAGVADTGAYGKMSPEKILELEPDLIISGMADSYETLSQIAPTIIVPYGDLKNAHEELTYLGELLGKEQKAKAWLAQYDQRIAEAKAKVNAAIPADATFSILEHSGKKVWAYGDNFGRGGQPVYQALGRKPPAEVGEEIMEKQWAEISAEVLHKYAGDYLIVTDNDQTVQDYKNDPIWGSLPAVKNNHIYVWKEEKSWYYDPIAVLSQTEELAAWLTE
>NZ_CP009287.1|WP_042267017.1|4381177_4382797_+|ABC-transporter-substrate-binding-protein
MHTLGSGSSLTPPHSFHFPLRIANLNGLSVGGEHNIRPHSSILMIVTGGHGTIELERQQYNLACGIMLCCSSPLSISFDPQYQFHGVWIEYNTHPPQHPGANPLNNGTPVRAVSAKACTLASELLNTWEKPAQDQPFAAQLLFSELLAECFSRQAEIQASAHWLDLVLQHIETHYNEDLTRAQMAERAGVSPEHFSRTFRKATGQTFNEYLSLLRIRRAQQRILTDTPNLTKLALEVGYGEGTYLSRKFKQVVGISPAAYHRKNKRIVALNFNHTASLRALEVMPELGVYSSWMERLELAPSQQKLRFEERRNTSLYRSVAAARPDVIISYSLPGENKLLLPLAPVVELPYMQMGWREQFQQIAVIANREQQAEAWLNRYDALCHAANLELGRLLGARGTAIVWEIDEEVAYCYSSSFGHGSQILYGELGFRPPSALLEQGLLHNGYLEVSIDHIPAYPAEHIFITSTPSTREGQARFRALLQSPGWQKLDAVQEGRVYPLNQPDKFYGFDPLSSLAQLKTFMQAITSQIYMRQDHIKP
>NZ_CP009287.1|WP_025708777.1|4380455_4381085_+|response-regulator-transcription-factor
MTENIRVYLLDDHPLVLEGLQNRLNAEPGIEVLHTFTDPREFISQAEQLCPDVAVIDISLPHMDGFQLARRLKEQYGNTLKIILLSGYAYEEFYIKAYKIGVHAYLSKQASYTQIINAIKQSMLGHILIPESIGTAHSSQDALTPAERKVLQLLAKEKTNKEIAHELALSQRTVEYHLASVNQKLGVTSRIGAIVKGFELGLLTFLKED
>NZ_CP009287.1|WP_025708775.1|4378144_4380463_+|hypothetical-protein
MSSLLRHRRLQHCYIYVCLALFIVTSLYIQIRSFATPYSGILVEQNRSLEWTIAGIQNDSIAANWNIAPGDRIVSVDGQPTPKIFTAAQEKMLVGATRIEVLGSTGLPRLFIVKPTIEDKLENGLAFLLELFLIGVGGYAFLKKPGSHLIHRFFLLNVLIASTIITLFSDEIEISSYLFSYCAVWLPYVMLSFYLLFAFRSIYAKFRFLLMGYLAYAFTCSAFTAFFLLRREVYDWVSHLLNIVFIFTLLLMAGITAFYWNKLDRIEQNQLFLLFVGIFTSLMPYVLLYALPELLRGSALIPAEYVLIGLVPVSGTLAYLLVQRQIVDMKFYITRLSVHSLYYSAMLVLFLLAAVWDSLLYAAGLFILFGMLTFGYQRLLLRLQRQENRKTEWLEHQKLRLSLQLAEKKNIRDILKLSADLLHDLIDVEGLTLVYMDDNALPLVYSTGIYLNTLTPGTANMPDNNDWSGSEKYAQVIELSHGTEEPKLGYLCLGLKTNHTLLSAEEHRLVEKFRSEAIQMLLNARQTFRLRQEYEQLNKVQAAHHERRLRDLQTYSHMALEAREAEKIRISYFLHDDLLQNLIFLSRDLEELYDTGKYERERNATWLKCLYDSQRSIRSLSDQLYPHILDKGDLQEALHWLLRDMNRLNEVAVTLQYEAPVPEPFPSFVKTNLFRALRELIVNVFKHAEATEIYVRVWMGKGSLYCIVSDNGKGFSEATARPAAERGSGFGLMSVCDQMEHLGGSADIDSVPGQGTTVTLKLPLVKEITAND
>NZ_CP009287.1|WP_155990501.1|4390774_4390882_+|hypothetical-protein
METSSLCQPCSLGCGLKVTSVKGAVLSFSYTEKSS
>NZ_CP009287.1|WP_025707667.1|4393393_4394401_-|zinc-binding-alcohol-dehydrogenase
MKIVAAKEGKVTILQADIPELNKRHVQVRTEYSGISPGTELSAIKRSGLSPVYLGYSAVGIVEKTGSEVRDIHPGDRVACYGVPYVRHAEVISVPTNLVTKVPLHVNPEEAAFTGLGAIAIHALRTADVRFGDKVLVVGLGILGNLVAQIASAAACHTAAYDLSKERVQLLRGQTGIRWGFTSEEEVERFVLNETGGAGFDSILLCAGGPGEALINKSLEWLRDLGKIVIVGDLSMEFSRDLMFRKEAQILISRAGGPGRYDVHYEEDNLDYPIGFVRWTEGRNMDEYVRLLADKRITVSPAITHKFALEEASAAYGNYQSGPDQGALATLIKYF
>NZ_CP009287.1|WP_025707668.1|4394427_4395291_-|carbohydrate-ABC-transporter-permease
MVGERKISLFGVINTLILTLVAVATLYPIVYITAISLSDTVSVVQGKVFLFPKRLNFEAYGEVLKNDTIPRAYLNSVFYTALGTFVNLLFTAVAAYPLSQKGFFGRKFFMTAIVLTMFLNPGIIPTYVVVQQLGLTDSVWALVLPNAIWTMELIILKSFYENMSSQIREAALIDGASEYRILFNIVIPLSKPALASIGLFYFMGHWNSFFLPLIYLNDPDKYPLQVVLRDMLIYSAENDAGLVDRSALAPQSIKNATIVLSMIPVLLLYPFAQKYFAKGVMLGSEKG
>NZ_CP009287.1|WP_025707669.1|4395284_4396247_-|sugar-ABC-transporter-permease
MEHPAANYKTVPKKSSRSRLGTTWNHIKRDRQLLLLFLPCILFYAIFRYGPLYGLIIAFKDYSVFSGVLGSEWVGFEHFITFFTNHDFWMLFRNTLLLGLYTLIFGFPFPILLALLLNEVRNKWLKKSVQTFSYFPAFLSVVIISSMIIDFLSPNHGILNQMLAAFGFETKYFLVDPGWFRPIYVISEIWANMGYESIIYLAAIAGISPTLYEAAKVDGASRFHMIRHITLPGLFPTMLIMFILKTGSMIRVGYEKVLLLYNPMTYDVADVFSTYVYRKGLLESNYSYAAAVGLFEALVAMVMLLSANAVSKRLGGNGLW
>NZ_CP009287.1|WP_025707670.1|4396276_4397872_-|extracellular-solute-binding-protein
MLKKRISIVLTATLLTSILAACSSGTDKGGSAALPPQEPGQYGDTGNLALPLVDEPTTITYMLPSNAKDLGPGKLVVQELEKRTGIKVNFQTYSPQTYQDKLKVIVASGKLPDIFTGLKPAELKKIGKQNGVVAINKYADQLPNFKKLYMEENDWVLKSYGDEAGNLYTWPIYNLNRKVNHGFMFRKDIFDELGIKEWTNTDEFYEALKKVKAAYPDSYPYASKSLANIFRDWAFGWGLGNTDQYPAYYDEKDGTWKYAAVQQAHKDMLDFMKKLYNEKLLDPEFLTDTQDSWTTKMTTDKSFVTFDWIGRLDLFYNQIKEQNPDYDLRYANPVGPTGNVRTLPEVSDFSVAVAKNKNTEVSLKLLDYLTSPSGSELMTIGVEGVNFEWGGDGFPVYPELKDLPLVDITVLEDRYAMWLEGAYLRPDHRSIYYRFSEKEQEAQDKIVKEDRFEPLDPILNFTDEETSKLAELQTSLQKSAEEFNAKYILDAGYGEAQWADFQTELSRSGVEELMSIYNAAQKDTRSPNRRP
>NZ_CP009287.1|WP_025707671.1|4398142_4399516_-|extracellular-solute-binding-protein
MAKIDRHTFQTRTRHMSADLKQKINSGAYSPGEYLPSELALTELYKLSKNSVRYVLDELVQEGLIIKIPRVGTQVAKSIAKETIRFGVYPSLYKEAGMEELIKRFHEKHPYIHVETIELPYVSSDSIANLIRLGIVDVLTVNLQDMYQFKERNSLDLFAGQDRRDNIYPFLTPYFEKEPGVLAAQPFVYSPVILCYNKEHLKEKRLGEPNSSWSWDELATLLRELKAPHRYSIAFQLFSMNRWPIFWMQNEDDPAPADSNPSQYGASMPIEGLRWLRDLVTEEGIFPLALAQGEFEAEKLFKEQKVSVMLTTYYMLNELKNADFSFDIAQLPHFKNDKTLLLSTGIALSAESGHKEPAACFVNYLTSDEAQSYIRQNTYSLPASRYITETVSVDIKNKPSRLELHRDYSSKYTTYRDLSISIQTLIRFEESLKQYMSYLTDEEGLAEVLLPARSLHL
>NZ_CP009287.1|WP_025707672.1|4399729_4401664_-|ABC-transporter-permease
MSLNYIILRNLRKNIKNYYLYVFALIFGVALYFSFVTLQYDPSMDEVAGSVKGGAAIGSSSVLLVAIVAIFLLYANTIFIKRRSREIGLFQLIGLTKGKIFKLLSAENLILYFGSMILGIGAGFAVSRLILMILFKILAIESVAKLRFSLEALQQTVIVFAAIYLLIMLMNYTFIKAQSILSLFKVSSTTQERIRKMPLWEIVLGLLGIGFIAAGYYLSTLLFNGKINNMTGLMISMIVILGLVIIGTYLFYKGSVSFVFNAIRKGKQGYLTINEVLSLSSIMFRMKSNALLLTIITTVSALAIGLLSLSYISYYSAEATAKESSPHDFGFARVETKEQFVQALDKAQIKYSEVHMQPFMMEVDASQIMQKDFKDTVISTSVVSDSSVKGVDLKPGETRLMGYNNALSSLLSLKETGEIGFKTINGTVKQQLAGISKKAIMPYYYSKNSGVFVVDETVFEELAQAKNPKLQSAKEAAPADYFGIELADRSQLKKANQIFMDLKPDKKNISQYEYEMNQRNNMGLIMFIVGFLGLTFLITSGCILYFKQMDEGEEEKAGYTILRKLGFTQGDLLRGIQFKQLFNFGIPLVVGLSHSYFAVKSGWFFFGTEMLTPMILVMLLYTALYSIFGFLSVLYYKRVISESL
>NZ_CP009287.1|WP_025707673.1|4401660_4402413_-|ABC-transporter-ATP-binding-protein
MILEANKIYKTYGNKFNRQEVLKGIDLQVSKGEFVGIMGASGSGKTTLLNVLSSIDRVSQGTIEIEGKEFTGMKEKELAEFRKKHLGFIFQEYNLLDTLTVKENVLLPLSITGISKREAHQKFEQVAGELGINELKDKYPAEISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASDLLNKLADMNTKRQATIVMVTHDAVAASYCSRVVFIRDGQIYTQLNKGDEPRQSFFNDIIKTQSVLGGVQQ
>NZ_CP009287.1|WP_025707674.1|4402879_4403884_-|sensor-histidine-kinase
MIRKYIEEKLSWLLLLGGLQIIFLFVAYVDSSIPFLPVLYIVGLNVMVCTAFVFLRYHKETRFYQRMEAWDEVYDPSTFKEADSPFEKMVQEAVNAQTERYKRESSVNFQRLEQEKDDLLSWIHEVKTPLTAMQLMIERLTDETLKLKLMYEWLRIHHLLDQQLHQKRIPFMRNDLYIEMTRLEPVLNREIQALKSWCIPKGIGFDVDLTAEEVLTDGKWLGFILRQLLTNAVKYSENSDILIQSRETAGHTVLVIEDHGRGIDPKDLPRIYDKGFTSTIGRQEGAATGMGLYLTKQVAEPLLISIHADSIPGEGTTFTLTFPRKNDFLRITGM
>NZ_CP009287.1|WP_025707675.1|4403880_4404570_-|response-regulator-transcription-factor
MFKIMLIEDDVTLFGEIKERLSQWSYEVYGISDFGKVLQEFTAVNPELVIIDIQLPQFDGFHWCRILRAHSNVPIIFLSSRDHPSDMVMSMQFGADDFIQKPFHFEVLIAKIQATLRRVYNYSTERIELKTWRGATIEYVKNTITSERGSALLTKNEMLILKILVESKDRIVEREELIRKLWDNEHFVSDNTLTVNVNRLRKKLEPLGLDAYIETRVGQGYMATEEALL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_22

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_22

4402663-4402802

Orphan

Consensus_repeat	Method
ACCCCTTGATCATCTGATGTTGTACTATGTCTGATCTCTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_22

>merge|NZ_CP009287|22|4402663-4402802|CRISPRCasFinder
ACCCCTTGATCATCTGATGTTGTACTATGTCTGATCTCTACAAACACTAAGATCAAAACATTGTGATCAAAACACTAAGATCAAAACACCAAGAGCAAAGACCCCTTGATCATCTGATGTTGCACTATGTCTGATCTCTA

>NZ_CP009287|22|18|4402663-4402802|CRISPRCasFinder
ACCCCTTGATCATCTGATGTTGTACTATGTCTGATCTCTA	CAAACACTAAGATCAAAACATTGTGATCAAAACACTAAGATCAAAACACCAAGAGCAAAG
ACCCCTTGATCATCTGATGTTGCACTATGTCTGATCTCTA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_155990501.1\|4390774_4390882_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_081758623.1\|4410622_4411198_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|379534
NZ_CP009287.1\|WP_025704133.1\|4412116_4412569_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707677.1\|4405259_4407134_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
NZ_CP009287.1\|WP_025704132.1\|4411201_4412095_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|237468
NZ_CP009287.1\|WP_025704130.1\|4409698_4410439_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|226674
NZ_CP009287.1\|WP_042267024.1\|4408887_4409697_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|223669
NZ_CP009287.1\|WP_025707671.1\|4398142_4399516_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP009287.1\|WP_025707678.1\|4407344_4408676_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708788.1\|4388031_4388883_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707676.1\|4404730_4405069_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708790.1\|4388861_4389665_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_CP009287.1\|WP_025707669.1\|4395284_4396247_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP009287.1\|WP_025707667.1\|4393393_4394401_-\|zinc-binding-alcohol-dehydrogenase	unknown	unknown	gnl\|CDD\|176217
NZ_CP009287.1\|WP_025707672.1\|4399729_4401664_-\|ABC-transporter-permease	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707674.1\|4402879_4403884_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340424
NZ_CP009287.1\|WP_025707670.1\|4396276_4397872_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270301
NZ_CP009287.1\|WP_025707675.1\|4403880_4404570_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|381143
NZ_CP009287.1\|WP_025707673.1\|4401660_4402413_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP009287.1\|WP_025707668.1\|4394427_4395291_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_081758623.1\|4410622_4411198_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|379534	pfam14278, TetR_C_8, Transcriptional regulator C-terminal region. This domain is a tetracycline repressor, domain 2, or C-terminus.	1.1368e-14
NZ_CP009287.1\|WP_025707670.1\|4396276_4397872_-\|extracellular-solute-binding-protein	gnl\|CDD\|270301	cd13583, PBP2_AlgQ_like_4, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	1.90206e-110
NZ_CP009287.1\|WP_025704132.1\|4411201_4412095_-\|hypothetical-protein	gnl\|CDD\|237468	PRK13684, PRK13684, photosynthesis system II assembly factor Ycf48.	4.54252e-07
NZ_CP009287.1\|WP_025704130.1\|4409698_4410439_-\|SDR-family-oxidoreductase	gnl\|CDD\|226674	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only].	1.11096e-94
NZ_CP009287.1\|WP_025707668.1\|4394427_4395291_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.31552e-65
NZ_CP009287.1\|WP_025707671.1\|4398142_4399516_-\|extracellular-solute-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.07282e-33
NZ_CP009287.1\|WP_042267024.1\|4408887_4409697_+\|alpha/beta-hydrolase	gnl\|CDD\|223669	COG0596, MhpC, Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only].	1.85485e-32
NZ_CP009287.1\|WP_025708790.1\|4388861_4389665_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	9.01344e-97
NZ_CP009287.1\|WP_025707669.1\|4395284_4396247_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	2.70568e-132
NZ_CP009287.1\|WP_025707667.1\|4393393_4394401_-\|zinc-binding-alcohol-dehydrogenase	gnl\|CDD\|176217	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability.	1.63971e-72
NZ_CP009287.1\|WP_025707674.1\|4402879_4403884_-\|sensor-histidine-kinase	gnl\|CDD\|340424	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.	1.48223e-47
NZ_CP009287.1\|WP_025707677.1\|4405259_4407134_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	6.94597e-99
NZ_CP009287.1\|WP_025707673.1\|4401660_4402413_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	6.21522e-108
NZ_CP009287.1\|WP_025707675.1\|4403880_4404570_-\|response-regulator-transcription-factor	gnl\|CDD\|381143	cd18159, REC_OmpR_NsrR-like, phosphoacceptor receiver (REC) domain of Streptococcus agalactiae NsrR-like OmpR family response regulators. Streptococcus agalactiae NsrR is a lantibiotic resistance-associated response regulator and is part of the nisin resistance operon. It is a member of the NsrRK two-component system (TCS) that is involved in the regulation of lantibiotic resistance genes such as a membrane-associated lipoprotein of LanI, and the nsr gene cluster which encodes for the resistance protein NSR and the ABC transporter NsrFP, both conferring resistance against nisin. This subfamily also includes Staphylococcus epidermidis GraR, part of the GraR/GraS TCS involved in resistance against cationic antimicrobial peptides, and Bacillus subtilis BceR, part of the BceS/BceR TCS involved in the regulation of bacitracin resistance. Members of this subfamily belong to the OmpR family of DNA-binding response regulators, which contain N-terminal receiver (REC) and C-terminal DNA-binding winged helix-turn-helix effector domains. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	2.53868e-60

>NZ_CP009287.1|WP_025707673.1|4401660_4402413_-|ABC-transporter-ATP-binding-protein
MILEANKIYKTYGNKFNRQEVLKGIDLQVSKGEFVGIMGASGSGKTTLLNVLSSIDRVSQGTIEIEGKEFTGMKEKELAEFRKKHLGFIFQEYNLLDTLTVKENVLLPLSITGISKREAHQKFEQVAGELGINELKDKYPAEISGGQKQRTSAARAFIHDPSIIFADEPTGALDSKSASDLLNKLADMNTKRQATIVMVTHDAVAASYCSRVVFIRDGQIYTQLNKGDEPRQSFFNDIIKTQSVLGGVQQ
>NZ_CP009287.1|WP_025707672.1|4399729_4401664_-|ABC-transporter-permease
MSLNYIILRNLRKNIKNYYLYVFALIFGVALYFSFVTLQYDPSMDEVAGSVKGGAAIGSSSVLLVAIVAIFLLYANTIFIKRRSREIGLFQLIGLTKGKIFKLLSAENLILYFGSMILGIGAGFAVSRLILMILFKILAIESVAKLRFSLEALQQTVIVFAAIYLLIMLMNYTFIKAQSILSLFKVSSTTQERIRKMPLWEIVLGLLGIGFIAAGYYLSTLLFNGKINNMTGLMISMIVILGLVIIGTYLFYKGSVSFVFNAIRKGKQGYLTINEVLSLSSIMFRMKSNALLLTIITTVSALAIGLLSLSYISYYSAEATAKESSPHDFGFARVETKEQFVQALDKAQIKYSEVHMQPFMMEVDASQIMQKDFKDTVISTSVVSDSSVKGVDLKPGETRLMGYNNALSSLLSLKETGEIGFKTINGTVKQQLAGISKKAIMPYYYSKNSGVFVVDETVFEELAQAKNPKLQSAKEAAPADYFGIELADRSQLKKANQIFMDLKPDKKNISQYEYEMNQRNNMGLIMFIVGFLGLTFLITSGCILYFKQMDEGEEEKAGYTILRKLGFTQGDLLRGIQFKQLFNFGIPLVVGLSHSYFAVKSGWFFFGTEMLTPMILVMLLYTALYSIFGFLSVLYYKRVISESL
>NZ_CP009287.1|WP_025707671.1|4398142_4399516_-|extracellular-solute-binding-protein
MAKIDRHTFQTRTRHMSADLKQKINSGAYSPGEYLPSELALTELYKLSKNSVRYVLDELVQEGLIIKIPRVGTQVAKSIAKETIRFGVYPSLYKEAGMEELIKRFHEKHPYIHVETIELPYVSSDSIANLIRLGIVDVLTVNLQDMYQFKERNSLDLFAGQDRRDNIYPFLTPYFEKEPGVLAAQPFVYSPVILCYNKEHLKEKRLGEPNSSWSWDELATLLRELKAPHRYSIAFQLFSMNRWPIFWMQNEDDPAPADSNPSQYGASMPIEGLRWLRDLVTEEGIFPLALAQGEFEAEKLFKEQKVSVMLTTYYMLNELKNADFSFDIAQLPHFKNDKTLLLSTGIALSAESGHKEPAACFVNYLTSDEAQSYIRQNTYSLPASRYITETVSVDIKNKPSRLELHRDYSSKYTTYRDLSISIQTLIRFEESLKQYMSYLTDEEGLAEVLLPARSLHL
>NZ_CP009287.1|WP_025707670.1|4396276_4397872_-|extracellular-solute-binding-protein
MLKKRISIVLTATLLTSILAACSSGTDKGGSAALPPQEPGQYGDTGNLALPLVDEPTTITYMLPSNAKDLGPGKLVVQELEKRTGIKVNFQTYSPQTYQDKLKVIVASGKLPDIFTGLKPAELKKIGKQNGVVAINKYADQLPNFKKLYMEENDWVLKSYGDEAGNLYTWPIYNLNRKVNHGFMFRKDIFDELGIKEWTNTDEFYEALKKVKAAYPDSYPYASKSLANIFRDWAFGWGLGNTDQYPAYYDEKDGTWKYAAVQQAHKDMLDFMKKLYNEKLLDPEFLTDTQDSWTTKMTTDKSFVTFDWIGRLDLFYNQIKEQNPDYDLRYANPVGPTGNVRTLPEVSDFSVAVAKNKNTEVSLKLLDYLTSPSGSELMTIGVEGVNFEWGGDGFPVYPELKDLPLVDITVLEDRYAMWLEGAYLRPDHRSIYYRFSEKEQEAQDKIVKEDRFEPLDPILNFTDEETSKLAELQTSLQKSAEEFNAKYILDAGYGEAQWADFQTELSRSGVEELMSIYNAAQKDTRSPNRRP
>NZ_CP009287.1|WP_025707669.1|4395284_4396247_-|sugar-ABC-transporter-permease
MEHPAANYKTVPKKSSRSRLGTTWNHIKRDRQLLLLFLPCILFYAIFRYGPLYGLIIAFKDYSVFSGVLGSEWVGFEHFITFFTNHDFWMLFRNTLLLGLYTLIFGFPFPILLALLLNEVRNKWLKKSVQTFSYFPAFLSVVIISSMIIDFLSPNHGILNQMLAAFGFETKYFLVDPGWFRPIYVISEIWANMGYESIIYLAAIAGISPTLYEAAKVDGASRFHMIRHITLPGLFPTMLIMFILKTGSMIRVGYEKVLLLYNPMTYDVADVFSTYVYRKGLLESNYSYAAAVGLFEALVAMVMLLSANAVSKRLGGNGLW
>NZ_CP009287.1|WP_025707668.1|4394427_4395291_-|carbohydrate-ABC-transporter-permease
MVGERKISLFGVINTLILTLVAVATLYPIVYITAISLSDTVSVVQGKVFLFPKRLNFEAYGEVLKNDTIPRAYLNSVFYTALGTFVNLLFTAVAAYPLSQKGFFGRKFFMTAIVLTMFLNPGIIPTYVVVQQLGLTDSVWALVLPNAIWTMELIILKSFYENMSSQIREAALIDGASEYRILFNIVIPLSKPALASIGLFYFMGHWNSFFLPLIYLNDPDKYPLQVVLRDMLIYSAENDAGLVDRSALAPQSIKNATIVLSMIPVLLLYPFAQKYFAKGVMLGSEKG
>NZ_CP009287.1|WP_025707667.1|4393393_4394401_-|zinc-binding-alcohol-dehydrogenase
MKIVAAKEGKVTILQADIPELNKRHVQVRTEYSGISPGTELSAIKRSGLSPVYLGYSAVGIVEKTGSEVRDIHPGDRVACYGVPYVRHAEVISVPTNLVTKVPLHVNPEEAAFTGLGAIAIHALRTADVRFGDKVLVVGLGILGNLVAQIASAAACHTAAYDLSKERVQLLRGQTGIRWGFTSEEEVERFVLNETGGAGFDSILLCAGGPGEALINKSLEWLRDLGKIVIVGDLSMEFSRDLMFRKEAQILISRAGGPGRYDVHYEEDNLDYPIGFVRWTEGRNMDEYVRLLADKRITVSPAITHKFALEEASAAYGNYQSGPDQGALATLIKYF
>NZ_CP009287.1|WP_155990501.1|4390774_4390882_+|hypothetical-protein
METSSLCQPCSLGCGLKVTSVKGAVLSFSYTEKSS
>NZ_CP009287.1|WP_025708790.1|4388861_4389665_-|undecaprenyl-diphosphate-phosphatase
MTDVIKAIILGVIEGLTEFLPVSSTGHLILAGNLLSFEGDAAITFKIVIQLGAVMAVLILYWRRYLAIGSNLIRMDFSQSKGLNVIHMILAMLPALILYLLFKDIIKSQLFGPTPVLIGLVAGGLLMIIAARSRKTETADTIDGINYKQAFGIGLFQCLALWPGFSRSGSTISGGLLLGTSQKAAADFTFLISVPVMFGASLLDLYDSRDLLNSDNIILMLIGFTTSFLVAMIAVVTFIKLIKRLRLEWFALYRFVLAALFYLIVIL
>NZ_CP009287.1|WP_025708788.1|4388031_4388883_+|hypothetical-protein
MVLLLVILAGTAIGVTVFFKIPYSKTAAEFQRTADHYLTTPATLNDVFTSEDWKLLPYPVRKYFETSGWAGARKMSSMKAVFKGVNFILSPKKPAIQIDYTQYNFSEHPIRIALIKTSMYGIPFQGLDTYAEGKGSMKGVLAKMFTLFNQQGGEMDQACLVTFLSEALLLPSAAIQSCITWEPIDDTHAGATISCYGITARGIFSFSSNGECLSFTTDDRTAIGMDGSKQRVGWSALMKDYQRIDGIRQPTHLQAVWHYDSGDLVYFDSRNFRMEYSYNMTIK
>NZ_CP009287.1|WP_025707674.1|4402879_4403884_-|sensor-histidine-kinase
MIRKYIEEKLSWLLLLGGLQIIFLFVAYVDSSIPFLPVLYIVGLNVMVCTAFVFLRYHKETRFYQRMEAWDEVYDPSTFKEADSPFEKMVQEAVNAQTERYKRESSVNFQRLEQEKDDLLSWIHEVKTPLTAMQLMIERLTDETLKLKLMYEWLRIHHLLDQQLHQKRIPFMRNDLYIEMTRLEPVLNREIQALKSWCIPKGIGFDVDLTAEEVLTDGKWLGFILRQLLTNAVKYSENSDILIQSRETAGHTVLVIEDHGRGIDPKDLPRIYDKGFTSTIGRQEGAATGMGLYLTKQVAEPLLISIHADSIPGEGTTFTLTFPRKNDFLRITGM
>NZ_CP009287.1|WP_025707675.1|4403880_4404570_-|response-regulator-transcription-factor
MFKIMLIEDDVTLFGEIKERLSQWSYEVYGISDFGKVLQEFTAVNPELVIIDIQLPQFDGFHWCRILRAHSNVPIIFLSSRDHPSDMVMSMQFGADDFIQKPFHFEVLIAKIQATLRRVYNYSTERIELKTWRGATIEYVKNTITSERGSALLTKNEMLILKILVESKDRIVEREELIRKLWDNEHFVSDNTLTVNVNRLRKKLEPLGLDAYIETRVGQGYMATEEALL
>NZ_CP009287.1|WP_025707676.1|4404730_4405069_-|hypothetical-protein
MKIKGLEGLTWETLEQEVGQGGKFVVYTFCISILIMTFRRSSAIYYIAPGMGSVGTGLRFTLISVLFGWWGIPWGPIYTIGALITNFKGGRDMTVEVLNSLAEQRGPQQQIG
>NZ_CP009287.1|WP_025707677.1|4405259_4407134_+|LTA-synthase-family-protein
MRLKEPRTLSKRSILFFSLIMLAKSYFAWYYLFEDGPTWTTWLKEIPFVLLIFCLIEWFATKRKIAIYMFVNLLITVLFFSLIVYHNHFGIIATSQVIGQAKQVGAVKKSIFSVLHPQYMLIFLDIIIISLVMFSRKKAVAWKKAMSRRSNRKAVAALFCISLIICMMNIFPNQASMNETIQAEQMGILNYEAYALLAEHKEEQIELSQITQSAIDQKKGIQAQSNPALFGAAKGKNLIIIQMESFQNFLINLSIDGQEITPNMNKLAAGNFYFPRFYQQVGQGNTSDAEFIVNTSFYVPPDGPATDIYATKELPSLPKLLQANGYDTATFHTNEVDFWNRGDLYKALGFDRYYDKAFFGEDDTVFYGASDEILYKKTSAELARMDLSSQPFYSHVISMSSHNPFTIPENKYKMTLPERFEGTLVGNYIRAQNYADYALGQFIDELKQNGVWDNSLIMLYGDHRGLPIFSLKEEDKVLLEEILNHEYTERDLINIPLIIASPGITASSVKEQLGGQVDILPTVSNLLGVSLAGHIHFGQDLLNQSSYNLLPQRYYLPTGSFVNNEELFLSGSGFEDGQHYTLSGDGTGPLQATEDEFNRALELLHLSDSYVTQLPDREVKDEEN
>NZ_CP009287.1|WP_025707678.1|4407344_4408676_+|hypothetical-protein
MRKSISVISTLAVTMLFSSQLAFAEEAELPANNILPPTESQEIAQKADITVIDLLDKSIPGDEGQKSTLSQQAAALLPPQLQAAHNYNFSPRDFGTSVVQTSDGGYVFVGSTTVNGNDDILFAKTDASQTLQWAYTYGGTGAESGVEVRVASDGGYMIAGTSNASGSSDVILIKTDASGTVQWSKTYGGPAKEEAQAMELGTDGGYIVAGTKESSSNSNDAYMLKVDANGGIQWTRTFGKDNLEDRFYGVAVTPDGGYVAVGYKTVSEIINPGTAQRMYGLMVKVNGSGNTVFESTLDRYSMLNGVAATSNGYVAAGAINNIDLPNNTQVYNIFVTKVGTSGSQSWSRQFHATNGDFGNDIKLAKDGNFIVTGFTTPAVSKEDLLMLKIDGSGNALWSNTYSFGDTGEIGRSVAATSDGGYVVAGSYLSNSDYDVLLLKFGSD
>NZ_CP009287.1|WP_042267024.1|4408887_4409697_+|alpha/beta-hydrolase
MEYWIKAEPDVNVYVNDINPLGRKTILFIHGWPANHKMFEYQYNHLVPLGYRCIGMDMRGFGNSDKPLGGYDYNRLADDIRCVIEAMRLRDITLGGHSTGGAVTIRYMARHNGYGVSKLALFASAAPSLIQRPGFPYGSTRETVEQIIQATYRDRPKMLRDFGELFFYQKVSEPFSDWFFQLGLQAASWSTIAVSKAWLAEELFHDLAKVQVPTLILHGIHDQVCLYPLAVAQHQGIRNSVLVPFENSGHGLFYDEREKFNRELSRFVG
>NZ_CP009287.1|WP_025704130.1|4409698_4410439_-|SDR-family-oxidoreductase
MNNVDAKVVIITGASSGIGEAAARLLAQKGAKVVLAARRAEKLQAIVQEITEEGGVAAAFQADVASSVEVQKLAQYALARYGRIDVLVNNAGVMPVSRLSELRIAEWEQMIDVNIKGVLYGIAAVLPTMREQQGGHIINIASVAGHEVSPASSVYSATKFAVRAISEGLRQEESPTSRIRSTIISPGITESELVNTVKSPEVQAMAGHFSALSISSSRIADAILYAVNQPEDTGVNEIVIRPTVQP
>NZ_CP009287.1|WP_081758623.1|4410622_4411198_+|TetR/AcrR-family-transcriptional-regulator
MNTEMKLDRRVARTREAISKAFLELFSEKKFSQITIHDISERANVNRGTVYLHYTDKYDLLDQCIEEHLKQLLTFCSHNKSREGITTLASELKPVFEFLETNFLFFSAMLQNQRTEVFRERLLEFVSANIKEELDSQKADTLINHELNAQFMASAFVGIVEYWIRNNMPHPPQYMAEQVWRLFERNEISPG
>NZ_CP009287.1|WP_025704132.1|4411201_4412095_-|hypothetical-protein
MQKGLSLKIHWMAAVVLIAFAGMFITGGTSEGSGSTIKPGTVYTRNSAGEQVIAYDAGHSYALDKEGRVIISYNNGKSKVKAPLALNSGYAEESGMTADGAGFFISTDKTAIVYGGSGAIPVQVLITNDQGKTWNTYPVTREITGTTKNVGFITQNDGWMVLNSFKGMGSEDHYIYKTRDGGKTWSEVKGNANEVYARVLTGAGFANDKIGFMGFRYETDFQPAICWTQDGGKSWTKLHIKLPAGFEDYGLTPLSPVFKGAKGKFPIQLSKDGASNVVGTIYLTSNDYGKTWRYDKK
>NZ_CP009287.1|WP_025704133.1|4412116_4412569_-|hypothetical-protein
MFHPVSLWVPLLILLPNLLFFRFEPQNMPDKTTRNRFFTGAEFIGRMGVIMVPLFYTLHLQNGFEVLALTVMLFSLGIYYYGWVRYFRNGRPYRLLFTPLMGIPVPLALSPVLYFLSASVLLHSGYLLLFSFILGAGHIPASLSDYQRNA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_23

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_23

4509540-4509613

Orphan

Consensus_repeat	Method
AATTAAGTTCCTTTTTTCCACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_23

>merge|NZ_CP009287|23|4509540-4509613|CRISPRCasFinder
AATTAAGTTCCTTTTTTCCACTTAAATCTCTCGATTGTTGATTTCTTAGGAATTTAAGTTCCTTTTTTCCACTT

>NZ_CP009287|23|19|4509540-4509613|CRISPRCasFinder
AATTAAGTTCCTTTTTTCCACTT	AAATCTCTCGATTGTTGATTTCTTAGGA
ATTTAAGTTCCTTTTTTCCACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025705490.1\|4514151_4514820_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707505.1\|4504820_4506650_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270300
NZ_CP009287.1\|WP_025705491.1\|4514812_4515499_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224578
NZ_CP009287.1\|WP_025707503.1\|4507725_4508685_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP009287.1\|WP_036706066.1\|4499288_4499723_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009287.1\|WP_025707504.1\|4506816_4507710_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_025705488.1\|4511924_4512524_+\|GyrI-like-domain-containing-protein	unknown	unknown	gnl\|CDD\|227169
NZ_CP009287.1\|WP_025705492.1\|4515578_4516208_-\|YhbD-family-protein	unknown	unknown	gnl\|CDD\|379048
NZ_CP009287.1\|WP_025705489.1\|4512570_4514106_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP009287.1\|WP_042267062.1\|4517656_4519006_-\|VWA-domain-containing-protein	unknown	unknown	gnl\|CDD\|378410
NZ_CP009287.1\|WP_042267057.1\|4497661_4499125_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP009287.1\|WP_042267059.1\|4510873_4511788_-\|SMP-30/gluconolactonase/LRE-family-protein	unknown	unknown	gnl\|CDD\|369882
NZ_CP009287.1\|WP_025707508.1\|4499843_4501553_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270298
NZ_CP009287.1\|WP_025707405.1\|4496603_4497050_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP009287.1\|WP_025705493.1\|4516397_4517534_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379240
NZ_CP009287.1\|WP_025707506.1\|4502939_4504691_-\|histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP009287.1\|WP_025707507.1\|4501549_4502947_-\|response-regulator	unknown	unknown	gnl\|CDD\|381091
NZ_CP009287.1\|WP_025704773.1\|4519152_4519764_-\|50S-ribosomal-protein-L25	unknown	unknown	gnl\|CDD\|235534
NZ_CP009287.1\|WP_025704774.1\|4519965_4520931_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236898
NZ_CP009287.1\|WP_081954757.1\|4508731_4509400_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|311808

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025707505.1\|4504820_4506650_-\|extracellular-solute-binding-protein	gnl\|CDD\|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	1.19202e-27
NZ_CP009287.1\|WP_025705491.1\|4514812_4515499_-\|hypothetical-protein	gnl\|CDD\|224578	COG1664, CcmA, Integral membrane protein CcmA involved in cell shape determination [Cell envelope biogenesis, outer membrane].	0.00120997
NZ_CP009287.1\|WP_025707503.1\|4507725_4508685_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	1.24001e-82
NZ_CP009287.1\|WP_036706066.1\|4499288_4499723_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	1.16279e-16
NZ_CP009287.1\|WP_025707504.1\|4506816_4507710_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	1.764e-51
NZ_CP009287.1\|WP_025705488.1\|4511924_4512524_+\|GyrI-like-domain-containing-protein	gnl\|CDD\|227169	COG4832, COG4832, Uncharacterized conserved protein [Function unknown].	2.56114e-58
NZ_CP009287.1\|WP_025705492.1\|4515578_4516208_-\|YhbD-family-protein	gnl\|CDD\|379048	pfam13171, DUF4004, Protein of unknown function (DUF4004). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 210 amino acids in length.	1.38283e-83
NZ_CP009287.1\|WP_025705489.1\|4512570_4514106_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	8.84696e-69
NZ_CP009287.1\|WP_042267062.1\|4517656_4519006_-\|VWA-domain-containing-protein	gnl\|CDD\|378410	pfam10138, vWA-TerF-like, vWA found in TerF C-terminus. vWA domain fused to TerD domain typified by the TerF protein. Some times found as solos.	4.17944e-98
NZ_CP009287.1\|WP_042267057.1\|4497661_4499125_-\|MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.57028e-70
NZ_CP009287.1\|WP_042267059.1\|4510873_4511788_-\|SMP-30/gluconolactonase/LRE-family-protein	gnl\|CDD\|369882	pfam08450, SGL, SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.	1.89645e-90
NZ_CP009287.1\|WP_025707508.1\|4499843_4501553_-\|extracellular-solute-binding-protein	gnl\|CDD\|270298	cd13580, PBP2_AlgQ_like_1, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	1.17601e-108
NZ_CP009287.1\|WP_025707405.1\|4496603_4497050_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	1.25384e-27
NZ_CP009287.1\|WP_025705493.1\|4516397_4517534_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379240	pfam13527, Acetyltransf_9, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	6.82935e-12
NZ_CP009287.1\|WP_025707506.1\|4502939_4504691_-\|histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	1.22481e-39
NZ_CP009287.1\|WP_025707507.1\|4501549_4502947_-\|response-regulator	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.20772e-46
NZ_CP009287.1\|WP_025704773.1\|4519152_4519764_-\|50S-ribosomal-protein-L25	gnl\|CDD\|235534	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed.	2.90526e-47
NZ_CP009287.1\|WP_025704774.1\|4519965_4520931_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236898	PRK11308, dppF, dipeptide transporter ATP-binding subunit; Provisional.	4.01879e-145
NZ_CP009287.1\|WP_081954757.1\|4508731_4509400_-\|hypothetical-protein	gnl\|CDD\|311808	pfam08017, Fibrinogen_BP, Fibrinogen binding protein. Proteins in this family bind to fibrinogen. Members of this family includes the fibrinogen receptor, FbsA, which mediates platelet aggregation.	2.49899e-07

>NZ_CP009287.1|WP_081954757.1|4508731_4509400_-|hypothetical-protein
MHFLHKLFERAPLGGCAETTAKLPLLERRRRVCAETTAELPLLERRRRVYAETTAELPLLERRRRVCAETTAKLPLLERRRRVCAETTAKLPLLERRRRGCAETTAKLPLLERRRRVCAETTAKLPLLERRRRVYAETTAKLPLLERRRRVCAETTAELPLLECRRLVCLDTKADQPFFSPHREDQKGGSRKFVRSPVKIVRNCITALPEGHSGLSPGREVF
>NZ_CP009287.1|WP_025707503.1|4507725_4508685_-|sugar-ABC-transporter-permease
MGVPSGELLRGVEPVRPSRWKLQNKYKLFLLALPFLAVTFVFYYLPVSGWIYAFYDFIPGIPLSDTPYVGLKWFRTLVANPTQTGEVLRVLKNTVAMSSLGLVTSVFPVIFAILLTEIRAGWYRKFVQTLTTIPNFISWILVYALAFSLFSVDNGVVNHFLVQLGIVNEEFNFLASSSHVWLTMIAWYWWKSLGWGAILYLAAIAGIDQELYEAAEVDGASRFRKIWHITVPGIIPTFFVLLLLSIGNFVNNGMEQYFAFQNAMNKDAIEVLDLYVYNIAFANNFPFATAVSMLKSVVSVILLFAANTLSKVVRDESII
>NZ_CP009287.1|WP_025707504.1|4506816_4507710_-|carbohydrate-ABC-transporter-permease
MLKKLKPGDALFQGIIYVLFGVFTLSCIYPFYYLFINTISSNDLSAAGDIKFYPQQIHFDNYSKVLRISGLSHAALVSVYRTLAGTFLTVGASAFLGYLFTKKEMWGRQIWYRSVVVTMYFSAGLIPWYITMHNLHLTNNYLAYILPTIITPFNIILVKTFVEAVPPSLEESAAMDGAGVLRSFWSIIVPLTTPILATITIFSAVNQWNSFIDTAFLMTDTKYYTLQFLLWRYLNESSSLAALIRSSPDMAASVQNMQTPTSVRMTVTMIVVLPILIVYPFFQRFFVKGIMIGAVKG
>NZ_CP009287.1|WP_025707505.1|4504820_4506650_-|extracellular-solute-binding-protein
MKFKKLPLILLSMVLVLASCGGGNGNSGKTNTAESTGKPAAQATDAAAGSAVPSDGALDHSKPLKLTVFSTTANYAGPQTGWFAKIIKDKFNIELDIVASNLTGGDTKISAMMASGNLGDIIVFGDDKNHYPNAIKGKLLLDWTRDGLLDKYGTDITKQFPKAVEKAKVAFGGGSAVYGIGNSVATNPSGPSEGKDMTWGPDLRWDLYQQTGAPEISTIEDYLPVLKKMQELEPKNEQGKKTYAFSLWSDWDGNYKMTLAKQFANMTGYDEIPDTALYVKADEEKYYDFISGDSWYMKSLKLYYEANQMGLLDPDSLTQKFDDVVAKYKDGRLLFSWFPWLGAANYNTPERTAEGKGFALVPFKDELMYSTGFNVYGGNGIIAIGAKAKEPARIMEFLNWMYTPEGAMISAGSGTAVPNGPQGLAWDIDSSGKPVVTDFGWKAYADQQNTKVPDEYGGGDYYYGSNQMNFSFIVPAMVNPQTSEPYDHNLWTTSLERNPTKLDSDWRAKMGVLTAKEYFEKNKRLAVAPQGFTGKAPLTMDKTLEQKNKQIGTVIQQISWKMVFAKNQAEYDKLNKEMHDKVNGLGYADVMDFSVKKAEELFEARKSVK
>NZ_CP009287.1|WP_025707506.1|4502939_4504691_-|histidine-kinase
MRILKRKALRQTPAGQSLRTTLVIYLLVGTLLPLLIVGIVSYTSIYSILSGKIGSGIRASLQQEALILENAIDNLDFASKQFALDGQIVEEMSSFLEEKQIYRKSRIMNSINQKINLVNFTNPYIGLTAYIMPGSDDPVLFTNMSTRRDFDLGRLPSFMRYNGADYYGPHETMYAVGDNVVFSERRIVRVNGRHELYIYLETNYSLLRKIFNPQAYGMQVNHLLVNQNNKDVHVIDGELPASVVEAARASKGPAHEVLDGYHLFRYESPQGWKLMAAVKKSVYSSEISSWFYKMILLALSTLLFAGMLAWLIWKRIYGPLRKVNLEIIRMAENVTAPVAFTNVAEFDFVLMNFQQMKDQVNELILAVARNEKQKSQFEIEKLLSQINPHFLHNTLNTVQWLARLNGQKEIDKLVTLLVKVLHYNLGKQSIIVTIGEEIEAIRNYMELQRIRYDYEFEFNVQADETVLGAAVPRFLLQPLVENSIYHGLNDNGRVDVIITAHGPGEVQLCVRDTGTGMDEARIAELLSDDGVTGRGLGIGFSYVMRMLRTYYGEQMTLQIHSAANEGTTVSIIIPIKGKEDFDD
>NZ_CP009287.1|WP_025707507.1|4501549_4502947_-|response-regulator
MIKAVVVDDERLVRKGFISLIDWSSFGVVIVGEAGDGNAALTLLREQEADLLFVDLTMPGMSGFELIRQVRQRYPAIRCVVLTCHHEFDYVQEAMRLGAVDYIVKTLLEVENADETIRRLVERVKWEDSTRELLARGEGKVMAADLALLYLPQLPGGNEEELFRLSVTKNNPLIAFQNMWMTPLLSRYPDNETCRELQTVLGGGWQAALVSGLKNQLLQEAEEVLGKTVRHALFYYCGAEEPARLDFGGLKRIAGERLPAGEDMLSEAQNLRWTLDREAWEGFTAGVQQRQPAQEQISAFSHLLLHDWSGLLLKAEEAAQLKASAAGNLNWGQWKSWLRQFSGCAQQRMLELGLSKEVVFCLIRAVRYMRTHAGDKINQGDVAAEINMSRGYFSQCFARFAGETFGESLRGMRLELAKTLLLETYDPICEIAGRSGFEDDRYFSRLFREHVGKLPSEYRAEGMER
>NZ_CP009287.1|WP_025707508.1|4499843_4501553_-|extracellular-solute-binding-protein
MNRAVKYVLPAVALVCLAACREGNAPAAGSGGTDTRATQAESAAYGRYEEPVVMRIGFKVPDSRLNTGDSNDNNPISRYLESLTNIKVIHSWEAKGEEAFTQKAQLAIDSNDLPDAMVVDRDQLKKLIDSDMIADLTETYKEYGSELIKDMYDSTQGEAPQDGMRNGRLYGLPNVAIHADSPSLLWVRQDWLDRVELPAPRTFEDIEAIAKAFIEQDPDGNGKRDTVGLSAYNNIVYGTKPHVNGLDTLFSALHAFPTNWIRDSRGNIVYGSITPEAKEALGKLADWYKRGLIDPDFALYKETQEPIISGKAGMFFGPWWMPYYPLSEAVALDTRAEWRAFAAPLDASGKFVTHMAPVTDRYLVVRKGYEHPEAVVKLLNAFTRLERRRDPNLEAVRSLDDFSAQTGIQPRAYYPFDLLIDYTDAIEKHYADMQQALHGKIDPDALDPDTHLLYDLWLADEEQPKKNLEGWKAANAYKYGVSVLSTTPIERVRSVFYGSTMHMRSHWPELQKLESETFLNIIVGDSPLSDFDLFAAKWKSLGGDAITQEVAQIVNSRDAGRQESESAGT
>NZ_CP009287.1|WP_036706066.1|4499288_4499723_+|MarR-family-transcriptional-regulator
MLNSNREPIGKLISQLYRQNQKFLVKELLPYGIGSGGQHIFLKLIVNRPGITQDQMTNEMKFDKATTARSVKKLEEAGYIERRTDPKDRRSSLLYPTPKAVKFAPVLQSILADLDSKLTFELTEEEADQLVALLQKVSKNSANL
>NZ_CP009287.1|WP_042267057.1|4497661_4499125_-|MFS-transporter
MSTMTATYQEDAAVQKKRWIILIVLNLFTFMSTLDGSIVNIALPVLVKQLHLPVAKVEWVTTGYLMAICSAVLFFGKLGDIAGKIRIFKIGTIIFVVGSLLCGLSASLPLLIASRVVQAIGASMTMANSQGIVTDIFPATERGKALGLIGTFVSLGSIAGPSLGGIIVSSLGWEYIFWVNVPIGLIAIVLGWKVLPKDLIRVKAKIDLPGSLLFAIFIVALFAGLLLGQQLGYGDSRIISALAAAAAAFMVFLIVELRRSQPLLQLSLFKNPLFSLSILCGFLVFVANFCFNIIAPFYAQNMLNLSPFYAGFLLMLFPISMVIVAPLSGALSDKIGSEFLTFAGLIVMVIAQFGLARLHDGSAVALVGVWIAMLGIGSGLFQSPNNSLVMSTVPRTQLGSAGSVNSLVRNVGMVVGITIATSILFNVMSSKAGYRVTDLIPGRPDVFLSGMHVVFMTSSAICLVSALLTGWRMISIKRAKKAKRAAA
>NZ_CP009287.1|WP_025707405.1|4496603_4497050_-|carboxymuconolactone-decarboxylase-family-protein
MSLRFNYRAVNEQAFRTMMTLEQYGGGRIKDKVLYELVKIRVSQINGCAFCLDMHAKDLMKLGDYADHILLLSAWHEVPLFTEKEKALLELAETVTLISQAGVPAALYDKVMEHISQEEFVDWIMVINTINNWNRIAISTGMYPGCFN
>NZ_CP009287.1|WP_042267059.1|4510873_4511788_-|SMP-30/gluconolactonase/LRE-family-protein
MVSYSGVELGGLPVIIQAEMILDVQAELGEGAHWDSEAGRLYWVNIDGRQLRIVDPVTLSERIYAFGQKISAAVPAVSGGWVVALQDGIYKFQEDQSLELLAQVEKDLPGNRLNDAKCDSKGRLWFGTMSMEDKRDAGSLYVMEPGGKVRKALSGIGISNGLAWDDSRGLMYYIDTLTRGVDVMDYDLQNGTVSGRRTVVRFPEGAGGPDGMTIDSEGMIWVAHWNGGCVSRWNPHTGEQLGKIEVPAPLVTSCAFGGEHLDQLYITSARGGMSPEELQRWPLAGGLFKANTGIRGVTANRFAG
>NZ_CP009287.1|WP_025705488.1|4511924_4512524_+|GyrI-like-domain-containing-protein
MKYEWKKQDKALITVPEYNYFMLKGEGNPNSEDFAQAVGVLYSLTYAIKMLPKKGPAPEDYYEYSIFPLEGVWDLSEKGRSQAALDKNELVYTIKIRLPDFVTPALAGGILEKVQGTKPHPLLQKAVFGSSEDGLSVQMLHTGPYDEEPASFRKMEQYCAEHGLRRLSKTHREIYVTDARRTQPGKLKTVLRFLVAEEK
>NZ_CP009287.1|WP_025705489.1|4512570_4514106_-|MFS-transporter
MSSAQKTPNLGIVIAGLLLGILMASMDSTIVATAMGNIVGELGGMDKFVWVTSAYLVAEMAGMPIFGKLSDMYGRKKFFIFGIIVFMTGSALCGTADTITQLAAYRALQGIGGGALVPIAFAIMFDAVPLETRGKLGGAFGAVFGLSSIFGPLLGAYITDHIAWQWVFYINLPLGVIAFVMVVSFYRESVEHSKQPIDWPGAGTLLGAVISLMFALELGGKEYAWNSALILGLFAAFAVLAVLFLFAETKAKEPIISFALFRQRLYASSILCALFSGAAFIAASVYIPIFIQGVLGGSATNSGLVLLPMMVASVITASTGGFLMAKTSYRSLMVPTLALLVLGTGLVATLAPDASRLLVTLYMILIGLGVGASFSVLSTAAIHGLTPQQRGSASATLNFIRSLGMTIGITAFGIIQSHYLSSKLTEVFTGTAGAAPGGALDFKDPHALLSPETRAQIPPEILSKITDGLSFSITSTFAWAALPALLALLAACFMGRQKMDASAEGQMPSGH
>NZ_CP009287.1|WP_025705490.1|4514151_4514820_-|hypothetical-protein
MDETANRTNLKILGNSTSAGGCFLDVKVTGECTFNGDVDCRKLTLMGETKVNGSLVMENMKLTGECSVKGGIEGESLRGQGEIRAESVHVDGIKFTGNLSVAGNCDAEEMQISGAVQVDGLLSAETLEISLYGPSRAAEVGGGSVKIKRSLGGALIRPGHPGHLSFAAGLIEGDQVELQGTAAETVRGGRVVIGTGCEIGTVEYRDSLDIHQNAIVRNQMKV
>NZ_CP009287.1|WP_025705491.1|4514812_4515499_-|hypothetical-protein
MDKDAAADLQIAGIGGAAGGAYNHVSLEGLSRINGPVTARTFTGNGRMRLGGSLTVEQMETNGDLKIGGGLRVGTMKHDGLLKVEGGLHGESFTLNGMADIKGDCELENFTAEGVVAIGGFLSAGSVELVLQGQAKVKEIGVESLVIRKGGSGAWSRLAGGMIPKLRAELQARVIEGDFLDLEYTEAEVVRGTVIIIGEGCRVGRVEYRDRLTVHPGARVGMEEKIGG
>NZ_CP009287.1|WP_025705492.1|4515578_4516208_-|YhbD-family-protein
MEEDLISKKELLDLTGISYGQLYRWKRKQLIPENWFIRKSTFTGQETFFPKERMLGRIQHILSKKDDLSLDELAGKLSDMTWVQKQLLTLEEVRERNIVSSITLERYGQRDRNEHKYSFDQLLHLVAVDLLLGKGELSLEEADLLHHTLNVNRPQFQGKRWELFFARKMGVGFFLQALAPSELVFDEGVRLISRITLDDLTEQLQGKLG
>NZ_CP009287.1|WP_025705493.1|4516397_4517534_-|GNAT-family-N-acetyltransferase
MGDIRFVSREELKKAAELSDLVFRGEEQTSMAAKFPGIFSGSFMSSPGVFKDGQLVAFAGLVPGFIQIGAASVPIFSLGSVCTHPEYRGKGYANAILQRVFDHIDRSGGSLLLVSGTRDLYIRQGCHTFGSVRSYLLTTENEAVRKAAAGPAFVREAEEQDWFGLQRLAENREVRFNRSLYELATLVRAEAISDIYKLKQKIYVAETDGRLLAYAVIAVRKELKTDAVPLVIEWGGAPEAALQAITWAIAANGISELMLPVPWHETEMIEALGNSAYLETPNPGTVKIINPVRLWLQIHPYLQQKSPEAVNGVKVHYAAPGGETVLTVNGTAVHLNDKELISLFFDTDPQLELPAASREQLKELFPVPLPYASGLNFV
>NZ_CP009287.1|WP_042267062.1|4517656_4519006_-|VWA-domain-containing-protein
MDGTIINLISGSNAKLDEASMNATVKISCNSSPAELDLSCFMVGPDGRVPADDYFIFYNQPVDPQRAVRFEPIDKYSGEFVIDLRALQSSGVEKCVFAATLDGPGTFAEVRGCKISAAAGNTELVFAMTEGKAETSLVLAELYRHGQGFKLRAVGRGFHGGLKPLAEAHGVEVEDEPAAEAASTGEPGHTAAAAAELSASFAETAAASAASPPAQPAPPLRLNLTKIDLHKQQVKLSLRKKNMEQEKARVAVVFDASGSMSALYQKGVVQRAFERILAVAASMDDDGMLDVWFFATKSKRMPSVGEAGYEDYVKRTYPGPRMFGGLGIGNNEPVVMADIIKKYTREDPGTLPVYVVFFSDGGIYETPKISKLLIDSSKHNIFWQFVGLGHADYGVLRELDDLRGRYVDNADFFALDDLDEVSDEELYDRLFNEFPKWLREAREKGVIRS
>NZ_CP009287.1|WP_025704773.1|4519152_4519764_-|50S-ribosomal-protein-L25
MNTTVRLTERSGSTSSQRSKGFVPVVVYGAGSDSQSFTADAKTLNEILGKNPRAILKVELPDSGSKNVVIQEVQRQPLSRKLLHVDLHQIDMKAELDTKVAFHFTGDPAGVKSGGIQQVELYELDIRTLPDKLTATFEVDISGLDVGDQLLVSDLPKHEGWEVLTPEDTLIVRIAPPVAQEPADAEADEPAASEASAEQKTEE
>NZ_CP009287.1|WP_025704774.1|4519965_4520931_-|ATP-binding-cassette-domain-containing-protein
MSDALLEVRHLKKYFPVTQGLLNRTVGHVKAVDDISLTLQPGETFGLVGESGSGKSTVGRTILRLTEKTSGEVKFKGADIHSLSPAELRLLRPRMQLIFQDPYSALNPRVRVGDAIGEALLDHGLCSKHEVRELVLESLAACGLSSYHIDRFPHEFSGGQRQRIGIARALILNPDLIIADEPVSALDVSIQAQIINLFSKLQQSKGLAYLFISHDLSVVEHLCSRIGVMYLGSMVETAARDELFHNPLHPYTKALLSAVPVPVPRLKRERIVLKGDIPSPANPPSGCKFHTRCPFAVEVCKAENPVFRDAGGGHFVACHLA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_24

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_24

4602365-4602457

Orphan

Consensus_repeat	Method
CGAAAGCATCATCTTAAGTTTTGTTAGCG	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP009287_24

>merge|NZ_CP009287|24|4602365-4602457|CRISPRCasFinder
CGAAAGCATCATCTTAAGTTTTGTTAGCGTATACTTCCTGAAATACTTCGTACAAAACTCACTTCGAAAGCATCATCTTAAGTTTGTTAGCGC

>NZ_CP009287|24|20|4602365-4602457|CRISPRCasFinder
CGAAAGCATCATCTTAAGTTTTGTTAGCG	TATACTTCCTGAAATACTTCGTACAAAACTCACTT
CGAAAGCATCATCTTAAGTTTGTTAGCGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_052415721.1\|4609824_4611192_-\|CCA-tRNA-nucleotidyltransferase	unknown	unknown	gnl\|CDD\|237339
NZ_CP009287.1\|WP_025706081.1\|4609037_4609835_-\|biotin--[acetyl-CoA-carboxylase]-ligase	unknown	unknown	gnl\|CDD\|223417
NZ_CP009287.1\|WP_025703688.1\|4595984_4596857_-\|NAD(P)-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|180269
NZ_CP009287.1\|WP_025703692.1\|4591648_4592515_+\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP009287.1\|WP_025706083.1\|4606960_4607851_-\|pantoate--beta-alanine-ligase	unknown	unknown	gnl\|CDD\|376824
NZ_CP009287.1\|WP_025703685.1\|4599795_4600314_-\|DUF5590-domain-containing-protein	unknown	unknown	gnl\|CDD\|227656
NZ_CP009287.1\|WP_174469060.1\|4598484_4599012_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042267086.1\|4602860_4605722_-\|ATP-dependent-DNA-helicase-DinG	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|236148
NZ_CP009287.1\|WP_025706082.1\|4607852_4608719_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	unknown	unknown	gnl\|CDD\|376814
NZ_CP009287.1\|WP_025703691.1\|4592667_4593441_-\|DnaD-domain-protein	unknown	unknown	gnl\|CDD\|226445
NZ_CP009287.1\|WP_025703683.1\|4601645_4602299_-\|redox-sensing-transcriptional-repressor-Rex	unknown	unknown	gnl\|CDD\|235486
NZ_CP009287.1\|WP_025703689.1\|4594779_4595988_-\|acetate-kinase	unknown	unknown	gnl\|CDD\|234680
NZ_CP009287.1\|WP_025707468.1\|4613167_4613590_-\|methylglyoxal-synthase	unknown	unknown	gnl\|CDD\|179969
NZ_CP009287.1\|WP_025706085.1\|4605835_4606477_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|276809
NZ_CP009287.1\|WP_025703687.1\|4596989_4598492_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|273520
NZ_CP009287.1\|WP_025707470.1\|4611206_4612364_-\|N-acetyl-alpha-D-glucosaminyl-L-malate-synthase-BshA	unknown	unknown	gnl\|CDD\|274914
NZ_CP009287.1\|WP_025706084.1\|4606584_4606968_-\|aspartate-1-decarboxylase	unknown	unknown	gnl\|CDD\|376751
NZ_CP009287.1\|WP_025703684.1\|4600357_4601659_-\|amidohydrolase	unknown	unknown	gnl\|CDD\|238623
NZ_CP009287.1\|WP_025707469.1\|4612454_4613171_-\|bacillithiol-biosynthesis-deacetylase-BshB1	unknown	unknown	gnl\|CDD\|274915
NZ_CP009287.1\|WP_025703690.1\|4593461_4594757_-\|asparagine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235176

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_052415721.1\|4609824_4611192_-\|CCA-tRNA-nucleotidyltransferase	gnl\|CDD\|237339	PRK13299, PRK13299, tRNA CCA-pyrophosphorylase; Provisional.	3.98429e-114
NZ_CP009287.1\|WP_025706081.1\|4609037_4609835_-\|biotin--[acetyl-CoA-carboxylase]-ligase	gnl\|CDD\|223417	COG0340, BirA, Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism].	6.18498e-79
NZ_CP009287.1\|WP_025703688.1\|4595984_4596857_-\|NAD(P)-binding-domain-containing-protein	gnl\|CDD\|180269	PRK05808, PRK05808, 3-hydroxybutyryl-CoA dehydrogenase; Validated.	3.11903e-112
NZ_CP009287.1\|WP_025703692.1\|4591648_4592515_+\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	3.81358e-94
NZ_CP009287.1\|WP_025706083.1\|4606960_4607851_-\|pantoate--beta-alanine-ligase	gnl\|CDD\|376824	pfam02569, Pantoate_ligase, Pantoate-beta-alanine ligase. Pantoate-beta-alanine ligase, also know as pantothenate synthase, (EC:6.3.2.1) catalyzes the formation of pantothenate from pantoate and alanine.	1.94583e-157
NZ_CP009287.1\|WP_025703685.1\|4599795_4600314_-\|DUF5590-domain-containing-protein	gnl\|CDD\|227656	COG5353, COG5353, Uncharacterized protein conserved in bacteria [Function unknown].	3.67285e-16
NZ_CP009287.1\|WP_042267086.1\|4602860_4605722_-\|ATP-dependent-DNA-helicase-DinG	gnl\|CDD\|236148	PRK08074, PRK08074, bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon; Validated.	0
NZ_CP009287.1\|WP_025706082.1\|4607852_4608719_-\|3-methyl-2-oxobutanoate-hydroxymethyltransferase	gnl\|CDD\|376814	pfam02548, Pantoate_transf, Ketopantoate hydroxymethyltransferase. Ketopantoate hydroxymethyltransferase (EC:2.1.2.11) is the first enzyme in the pantothenate biosynthesis pathway.	1.276e-157
NZ_CP009287.1\|WP_025703691.1\|4592667_4593441_-\|DnaD-domain-protein	gnl\|CDD\|226445	COG3935, DnaD, Putative primosome component and related proteins [DNA replication, recombination, and repair].	1.44572e-37
NZ_CP009287.1\|WP_025703683.1\|4601645_4602299_-\|redox-sensing-transcriptional-repressor-Rex	gnl\|CDD\|235486	PRK05472, PRK05472, redox-sensing transcriptional repressor Rex; Provisional.	4.87641e-111
NZ_CP009287.1\|WP_025703689.1\|4594779_4595988_-\|acetate-kinase	gnl\|CDD\|234680	PRK00180, PRK00180, acetate kinase A/propionate kinase 2; Reviewed.	0
NZ_CP009287.1\|WP_025707468.1\|4613167_4613590_-\|methylglyoxal-synthase	gnl\|CDD\|179969	PRK05234, mgsA, methylglyoxal synthase; Validated.	1.69828e-75
NZ_CP009287.1\|WP_025706085.1\|4605835_4606477_-\|hypothetical-protein	gnl\|CDD\|276809	sd00006, TPR, Tetratricopeptide repeat. The Tetratricopeptide repeat (TPR) typically contains 34 amino acids and is found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans. It is present in a variety of proteins including those involved in chaperone, cell-cycle, transcription, and protein transport complexes. The number of TPR motifs varies among proteins. Those containing 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accommodate an alpha-helix of a target protein. It has been proposed that TPR proteins preferentially interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes.	7.75658e-05
NZ_CP009287.1\|WP_025703687.1\|4596989_4598492_-\|AAA-family-ATPase	gnl\|CDD\|273520	TIGR01241, ATP-dependent_zinc_metalloprotease_FtsH, ATP-dependent metalloprotease FtsH. HflB(FtsH) is a pleiotropic protein required for correct cell division in bacteria. It has ATP-dependent zinc metalloprotease activity. It was formerly designated cell division protein FtsH. [Cellular processes, Cell division, Protein fate, Degradation of proteins, peptides, and glycopeptides].	3.45185e-145
NZ_CP009287.1\|WP_025707470.1\|4611206_4612364_-\|N-acetyl-alpha-D-glucosaminyl-L-malate-synthase-BshA	gnl\|CDD\|274914	TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	0
NZ_CP009287.1\|WP_025706084.1\|4606584_4606968_-\|aspartate-1-decarboxylase	gnl\|CDD\|376751	pfam02261, Asp_decarbox, Aspartate decarboxylase. Decarboxylation of aspartate is the major route of beta-alanine production in bacteria, and is catalyzed by the enzyme aspartate decarboxylase EC:4.1.1.11 which requires a pyruvoyl group for its activity. It is synthesized initially as a proenzyme which is then proteolytically cleaved to an alpha (C-terminal) and beta (N-terminal) subunit and a pyruvoyl group. This family contains both chains of aspartate decarboxylase.	1.19628e-84
NZ_CP009287.1\|WP_025703684.1\|4600357_4601659_-\|amidohydrolase	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	0
NZ_CP009287.1\|WP_025707469.1\|4612454_4613171_-\|bacillithiol-biosynthesis-deacetylase-BshB1	gnl\|CDD\|274915	TIGR04001, thiol_BshB1, bacillithiol biosynthesis deacetylase BshB1. Members of this protein family are BshB1 (YpjG), an enzyme of bacillithiol biosynthesis; either BshB1 or BshB2 (YojG) must be present, and often both are present. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes. [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs].	1.18207e-96
NZ_CP009287.1\|WP_025703690.1\|4593461_4594757_-\|asparagine--tRNA-ligase	gnl\|CDD\|235176	PRK03932, asnC, asparaginyl-tRNA synthetase; Validated.	0

>NZ_CP009287.1|WP_025703683.1|4601645_4602299_-|redox-sensing-transcriptional-repressor-Rex
MKSDKISEAVVRRLPVYLRFLNDLQKREISTVSSQELGQKLDLNPAQIRKDLAYFGDFGRKGIGYDVSYLIEKIRHILKLDQQINVALVGAGNLGHALSNYNAYLKDMMKITAVFDSYPPKIGQKINSLTVQPMEELGSTIREQGIRIGIITVPDSEAQTVADILVDSGIEAILNFAPVILKTPANIRIHAADFTTDLQSLAYYLHDGKDETEDEQQ
>NZ_CP009287.1|WP_025703684.1|4600357_4601659_-|amidohydrolase
MSSNKTVIVNGRFLVPGTEQPVLSGYMTIENDLITYIGEIEPVIEEGTQTIDGSRLLFMPGLVNTHGHTAMSLLRGYGDDMVLQNWLQEKMWPMEEKFTGDDVYWGTSLSVLEMLKGGTTTFLDMYDHMDRVAEVTELSGIRAVLMRGVIGLCPEDVQNHKLAEAVAFARNWHGKADGRITTMISPHAPYTCPPEFFVKFVQAAHDLDLPMHTHMSETRREVEQNAEDYGLRPVAHLEKLGMFTRPSLVAHGVHLTDEEIEILARYNVGVSHNPGSNLKLASGVARVPELLRAGVTVSLGTDGAASNNNLDMFEEMRLAALIHKGVSGDPTAVPAPEALLMATEYGAQSIFLDRVGRLAPGMKADFIALDIDQPHFLPHTDLLSHAVYSASAKDVAHVWVDGKQVVKHGQCLTLDEEQIRRKAQETFEGLLKR
>NZ_CP009287.1|WP_025703685.1|4599795_4600314_-|DUF5590-domain-containing-protein
MKKRRKWLLLGILLVLLLLFGLSQFYAYVMKDQWSERSAATKVAEARAGLTEVTRAQKSVWDENSIYWVLTGRNTAGTELMVWVRFTRDGKPAGGNNDVYAEEVSKGMSEQKIRSIIASDLPGSTVERLLPGVYNGEYAWQLFYKLEGRYYYKFYRFADGSAIGDGYSLPNQ
>NZ_CP009287.1|WP_174469060.1|4598484_4599012_-|hypothetical-protein
MPVLLTSLLSAALLFGGWYSYREFAVQEPLQKIVSAYEGVNDSHISIKRNEVTLKLDLQPGTKLRELVQYVNTEGRSAIDGRTLKLDVEQHSSELLDEYWDQAMFSVAEAMESRKYTLIPAKLDELKTQNSKYSGVTAATEIDDNNVYVSLSDGKKSKFMILPRAAATMGVWNNA
>NZ_CP009287.1|WP_025703687.1|4596989_4598492_-|AAA-family-ATPase
MPKFWKEVLIGFVPVLVIFMAFVGINIFPVIIAAGMVGALLLIAHLRGGLTVNAGGDKKRKKNGPSKLTFEEIGGQDNAKQELREALDFLIRHEEISKFGIRPLKGILLTGPPGTGKTLMAKAAAHYTNSVFVAASGSEFVEMYVGVGAGRVRDLFKDARARALKENKQSAIIFIDEIDVIGGKREGGQQREYDQTLNQLLTEMDGIYNNDTPRILLVAATNRKEMLDSALLRPGRFDRHIQVDMPDKKGRKSILDLHAQNKPLHEEVDLDKIAEEAYGFSGAQLESVMNEAAIYMMRENLTQVEQRHLSMAIDKVMMGEKTDRETNHEEKKRVAIHELGHAIMAELLRPGSVSQVTLTPRGQALGYVRHNPQTEQYLYTKDYLENQIMIALGGAVAEEMYYGGRSTGSRGDFDQALNIVETMMKSGLTSLGIANLQMVTTEELMKENSKILDELMVRTHELLGKQRNVFDYSLDILMKEEVLSGEQFRCQFRDSVLLPA
>NZ_CP009287.1|WP_025703688.1|4595984_4596857_-|NAD(P)-binding-domain-containing-protein
MNFKKIGVIGGGTMGQGIAEMLAAKGLDVMLVEKTAERLDYSYAMIETSLDKQLEKWAITQAEKKLILSRIQKVTHFAELSSCDMVIETITEDLEAKQKVFNQLDQVCPSHIILASNTSTLSLTELASSTMYPERVIGMHFIHPVGKVDLVEIVRGLKTSDSTFEDTKAFVDEIVEKKGVMIYESPGFVSSRLICLFINEAMHVLQEGVASPEDIDDAMRIGYQFQHGPLEMADRFGLDSVLAALENMFREYGELKYRPSTILKKMVRAGQLGMKSGEGFFKYDKDGDRV
>NZ_CP009287.1|WP_025703689.1|4594779_4595988_-|acetate-kinase
MNILVINSGSSSLKYQLYNMTDESVLAKGLVERIGMDSSILNHKPTGKQEVTEVSEILEHNTAIRKVLACLTDKEHGVISSIDEINAVGHRVVHGGEFFKASALVDADAKTKIRQLFDLAPLHNPAAMMGISATEVNMPGVPQVVVFDTAFHQTMPEKAYMYAIPRVLYNKYKVRRYGAHGTSHDFVSKAAAEFLDRPLEDLKIITCHIGNGASVTAVDGGLSIDTSMGMTPLEGLMMGTRSGDLDPAIVPYVMNKEELSVGEVNSMLNKHSGLLAISGVSSDMRDIIDGAEKGEPNSTLAFDMYEYRLRKYIGSYAAAMNGVDVIVFTAGVGENAAVLRAKVLNNLTFLGIELDAEANKVRSGDPRRISTAESKVQVLVVPTNEELVIARDTYRIVQGING
>NZ_CP009287.1|WP_025703690.1|4593461_4594757_-|asparagine--tRNA-ligase
MANKSVIKNVNEHVGETVVIGCWINNKRSSGKIQFLQLRDGTGYIQGVVVKSEVPEQVWDDAKSLTQESSLYVTGIIREEPRSQSGYEMTVTGIQVLHLTENYPITPKEHGVDFLMDHRHLWLRSAKQRAVLVIRAEIIRAVQQFFNENGFTKVDPPILTPTSAEGTTNLFHTKYFEEDAYLTQSGQLYMEAAAMALGRVYSFGPTFRAEKSKTRRHLIEFWMIEPEMAFTDHEESLRVQEEFISFVVQSVLKNCRAELEAVGRDVSKLENIKAPFPRITYDDAIKFLNEKGYEIAWGDDFGAPHETAIAEANDKPVFITHYPASFKAFYMKPHPERPEVVLCADMIAPEGYGEIIGGSQRIDDPALLEERFKEHNLSMDAYKWYMDLRTYGSVPHSGFGLGLERTVAWICGLDHVRETIPFPRTLYRLYP
>NZ_CP009287.1|WP_025703691.1|4592667_4593441_-|DnaD-domain-protein
MDGKGWNTWGEGVSFGLQNGMAVIPYALLKYYRKLNLTGSEAMLLIHLFSFRQVEGIEFPSLEELQAVTGRSITAIAGELQKLMKEGFISIDEDNDELRDIHYERYNFSGLYGKLGAFLAGAVQESANSSSPKPAGNLPSLRESAHHTGAPAPDGGYGRTFPSAAGKDAEENRSLFTIFEKEFGRPLSPMECETISGWVDQDKYPEELILLALKESVFAGKIHFRYIDRILLEWARNRVKNAQDVKAYTQKFRGGGR
>NZ_CP009287.1|WP_025703692.1|4591648_4592515_+|pyrroline-5-carboxylate-reductase
MCQQPAVPLINHKIVFYGAGSMAEAIVRGMIARNVVDSGNIVMLNRSSSERLSELRSRYGVLGSNDPEQKNDYLRTAPVIVLAMKPKDAAEALRSLGTLLSPDQLVISVIAGMTIRTMQGLLGKSQPVVRTMPNTSSSIGLGATGIAYSKEVDEQSRRTALNIFEAVGLTSVIDEERMETLTGISGSGPAYIYYMMEAMIAAGIRGGLPAEQSRELTVQTVLGAARMVQQTGEEPAALRKKVTSPNGSTQAALEVLEKGDFFETVISAVNRCAERSREMGLALEKELS
>NZ_CP009287.1|WP_042267086.1|4602860_4605722_-|ATP-dependent-DNA-helicase-DinG
MKFAVLDFETTGTQSVGEIIQVGLAIIEEDRSISRVYGSYVKPGTPIPPFITGLTGITDSDVQDAPELDEMMMELVPLLDDVVLVGHNVAFDFHFLQNALDRCGYLPFQGRILDTIDFLKICFPSLTTYQLGAVSAHFGLTHERPHQADSDALATALVLLKCLEELYSFPLLTIQRLNELFADEDSDLAWYFDGLLHEREMETFQPEGELTFYRQLALAAGDWTELMPPREEGTGNPLQNITFKEYMEEVTQRLKEALPQYESREAQEIMIHEVMTALESDKHLLIEAGTGTGKSLGYLLPAIYHSVRSGQKVMVSTHTINLQDQLRERDIPLLTNVVPFPFKAAVFKGRGHYLCLRKFEHKINKKDFASPREEALTAAQMIVWLTQTQSGDDEELNLNGRGGDFWETVASDTDSCLGRSCPWFRKCYYHRAKHEAGIADVVVTNHSKLFADVKAGHQLLPAYEHLIIDEAHHLEDIAGKHLGMQMKYFTVAHTLTRLYKDSKSGQLPVLRQTLQSSGSEQAAEWSGVIDRIYPELLTVKESWDALSDKLFALLPERSDAAAGEAGQLVTRLLPGVQPKGWEEIAALENTLNLSLSEIIRKGDKMLSEMRESESQSSSDSLVTDIGGLFKDLASIREQVRFFMNLNDENIVYWMEGSGNYRGKSLQLYAVPVDVSSQLKELFFDKKKSIVLTSATLSVDKSFQFMIDNLGLGESAEQGRLMTALLPSPFKYREQALLVIPRDFPSVKGSVGDARFVDKLVHSLAEAAVATQGRMLVLFTSYKMLRQVYDPLKEALASQDITVLGQGVEGGSRSKLIRRFQDSAASVLLGTSSFWEGVDIPGEALTCLAIVRLPFQPPNHPLAEAKAELLQAQKKNPFMKLSVPQAVIRFKQGFGRLVRTAQDRGIVIVYDTRVIESYYGKYFLYSLPGPKMEHMLTDQMVPRIAEWLEDGSVS
>NZ_CP009287.1|WP_025706085.1|4605835_4606477_-|hypothetical-protein
MFQHLFAEMNKMLQEIAADFPTAEGARRNELLCKYNMLHRLSDEVMDEWLAFAEKLSDFRQNADFSPASEEEMPQVEAPELAMDSFVRGQGYYKLLMYRKCIEQFKDVITRYPDSLAARLYLAMAYLQEGELDVSWGHLHHMLALIREKKLKAMIYNALGCIRASQERYPEAQELFSLSLQHDPLLPEPSLNLEVCRRRGGKLQFGYQLVSLL
>NZ_CP009287.1|WP_025706084.1|4606584_4606968_-|aspartate-1-decarboxylase
MFRHMMKSKIHRATVTEANLNYVGSITIDEDLMEAADLLENEKVQIVDNNNGSRLETYVIPGPRGSGVICLNGAAARLVQPGDTVIIISYAMMSSEELAAHKPTVVFVDADNKPVKLADHELHATIA
>NZ_CP009287.1|WP_025706083.1|4606960_4607851_-|pantoate--beta-alanine-ligase
MRVVRTVLELREALDYMRMGGHTPVGFVPTMGYLHEGHASLIRKAGEMANTVVMSIFVNPLQFGPNEDFSSYPRDERRDLELAEREGADIVFIPGVEEMYPEPIRTKVSVDSLTTQLCGASRPGHFDGVTTVVSKLFNMVQPDYAFFGLKDAQQVAVLRRMVSDLNINVEIIACPIVREGDGLALSSRNVYLSGEERTQALVLSRSLRETRKAIEEGTVRTVEEARKLLESVISSSPLAVIDYVEILSFPDLETLEGGSLLSDAEGEVIMALAVKFGRTRLIDNNVFIPKEVHALV
>NZ_CP009287.1|WP_025706082.1|4607852_4608719_-|3-methyl-2-oxobutanoate-hydroxymethyltransferase
MADKHALNIVKMKKMKADGVPLSMLTAYDYPSALLAEEAGIDLILVGDSLGNVVLGYDTTLPVTIEDMVYHTRSVTRGARNTFIVADMPFMTYHGGIDETLRSVRRLMQEGRAHAVKMEGGVEICSTVSAVVSAGVPVLGHIGLTPQSVNMIGGYRIQGKDAKDAQRLMDEAKALEAAGVFGIVLELVTEEVAEAISKAVSIPTIGIGAGRYCDGQVLVFHDLLRYASPYRDKRFVKTYADVGTLIREGISSYVQEVKERSFPAESHVFNADEHVLDSLYGAAGKGEE
>NZ_CP009287.1|WP_025706081.1|4609037_4609835_-|biotin--[acetyl-CoA-carboxylase]-ligase
MNRNERLRLAGGRDTFIPGWVDRVRLLEAVVSTQEEAKKLAESGAPQGTTVRAEEQTGGRGRMGRKWHSPRGKGIWMSVVLRPELPLSLTPQLTLLAGVAVCLAIREVTGVQAGIKWPNDLLAGGRKVCGILLESSLREGRLHYAIAGIGIAANLTEEDYPPDLQGIGTSLLIEGGGIPVDRSALTAAVLTELEYLYLVYMEQGFAPIRELWESMSVTLGRQVGFNTPQGRCEATAVGLDDNGGLLLKDGTGSVIRVLSGEIEMI
>NZ_CP009287.1|WP_052415721.1|4609824_4611192_-|CCA-tRNA-nucleotidyltransferase
MDWTMAPSGMVAAGNLVLAGLLEQGHEAYFVGGCVRDELLGRPVHDMDLTTSARPEEVMGIFPRCVPTGLAHGTITVLQDGWSFEVTTYRTESGYADHRRPEHVLFVSDVKEDLRRRDFTINAMCRGLDGIVVDPYGGQEDSERRLIRCVGDAEARFEEDALRMLRCVRFASVLDFSIAKNTWRGLLRQRDKLAHIAVERVRAELERIVLGPHPQRGLGLLARSGLLPRGKAPFPWTGSDMAAAAALTAGIGDLQDAHLRWALLLHALKQPASESGELLRAWTFPGATRSAVAGVLRVRDAWDAALAEVPPGSPGGTEALRRRWIAAVLACGQSAAEGWLTLLAALPQAASPCPAGVAQPPAPALGAPEAGAPAAQRLNAPDIAALRSWTAEMPLHTLAELAVTGHELARALQKRPGPWLGERLQQLLLAAAAGDVPNDTQLLLQEAKRMDRNEP
>NZ_CP009287.1|WP_025707470.1|4611206_4612364_-|N-acetyl-alpha-D-glucosaminyl-L-malate-synthase-BshA
MDRLKIGITCYPSLGGSGVVATELGKLLAEKGHEVHFITHSIPFRLGTFQKNIFYHEVEVNDYYVFRYPPYDLALATKMAQVAKMVGLDLFHVHYAVPHAVCAYLAKQMLGNDIKVVTTLHGTDITVLGQDESLKDLIRLGINESDAVTAVSQDLIKETRKVLDITREIDLTYNFVDKRVYYPRDVTDLRGDFAEPHEKILMHISNFRPVKRVSDVVDIFAKVSQELPSRLLLVGEGPELPKIQAKICEMGLEDKVRFLGKQDEIAQVISLADLLLLPSEKESFGLVALEAMACGVPTIGSEAGGIPELIQHGKTGFLAPIGDTATMAKYAVKLLSDPLMEEQFRQACLKRSCNDFSRDVITNQYEDIYYRVLGCKVHGLDTIQR
>NZ_CP009287.1|WP_025707469.1|4612454_4613171_-|bacillithiol-biosynthesis-deacetylase-BshB1
MKLDILVFGAHADDAEIGMAGTIAKHTAAGFKVGLCDLTAAEMSSNGTVERRKMEAQQAADLLGVSIRTNLGLPDRGLYMTEEHLAAVTLEIRKFAPDIVFAPYWEDRHPDHIACSKLVEEAVFNAKLRKYMPDKPAVPAPQLYFYFINDLGRTDLIVDVTGQYSLKEQALSCYRSQFEKSPGEDVVSTPLNEGYIERVRSRDMLLGQRRLIPYAEGFASKVPHTVELFNTPHKQAQA
>NZ_CP009287.1|WP_025707468.1|4613167_4613590_-|methylglyoxal-synthase
MLKIAFIAHDRKKDEMVNFVTAYEHVFVGHQLYSTGTTGQRIMEVTNLSIHRYMSGPLGGDQQIGSMVATDELDLIIFLRDPLMAQPHEPDITALLRLCDVYGIPVATNIATAEILVKAIDRGDFAWRELVHKYKPGVDE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_25

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_25

4911569-4911951

Orphan

Consensus_repeat	Method
GACGCAGACATAGTCGCAGTTGC	CRT

8 spacers

The CRISPR arrays of NZ_CP009287_25

>merge|NZ_CP009287|25|4911569-4911951|CRT
GACGCAGACATAGTCGCAGTTGCGGTTGCAAACATTGTTGGAGAAGACAAACGCAGACATAGTCGCAGTTGCAGTTGCAAACGTAGTTGGAGAAGACTGACGCAGACATAGTCGCAGTTGCAAACGTAGTTGGAAAAGACTGACGCAGACATAGTCGCAGTTGCAAACGTAGTTGGAAAAGACTGACGCAGACATAGTCGCAGTTGCAAACGTAGTTGGAAAAGACTGACGCAGACATAGTCGCAGTTGCAAATGTAGTTGGAAAAGACTGACGCAGACATAGTCGCAGTTGCGGTTGCAAACATTGTTGGAGAAGACTGACGCAGACATAGTCGCAGTTGCAAACGCAGTTGGAAAAGACTGGCAGACATAGTCGCAGTTGC

>NZ_CP009287|25|4|4911569-4911951|CRT
GACGCAGACATAGTCGCAGTTGC	GGTTGCAAACATTGTTGGAGAAGACA
AACGCAGACATAGTCGCAGTTGC	AGTTGCAAACGTAGTTGGAGAAGACT
GACGCAGACATAGTCGCAGTTGC	AAACGTAGTTGGAAAAGACT
GACGCAGACATAGTCGCAGTTGC	AAACGTAGTTGGAAAAGACT
GACGCAGACATAGTCGCAGTTGC	AAACGTAGTTGGAAAAGACT
GACGCAGACATAGTCGCAGTTGC	AAATGTAGTTGGAAAAGACT
GACGCAGACATAGTCGCAGTTGC	GGTTGCAAACATTGTTGGAGAAGACT
GACGCAGACATAGTCGCAGTTGC	AAACGCAGTTGGAAAAGA
CTGGCAGACATAGTCGCAGTTGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_042268233.1\|4899374_4901663_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	unknown	unknown	gnl\|CDD\|235367
NZ_CP009287.1\|WP_025706715.1\|4918416_4919802_-\|STM4012-family-radical-SAM-protein	unknown	unknown	gnl\|CDD\|181292
NZ_CP009287.1\|WP_025705275.1\|4907949_4908384_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009287.1\|WP_025705281.1\|4913240_4914065_+\|NAD(P)-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|224995
NZ_CP009287.1\|WP_042267180.1\|4909559_4910258_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP009287.1\|WP_025705283.1\|4915337_4916009_-\|YitT-family-protein	unknown	unknown	gnl\|CDD\|376838
NZ_CP009287.1\|WP_025705282.1\|4914316_4915108_-\|TIGR00266-family-protein	unknown	unknown	gnl\|CDD\|376704
NZ_CP009287.1\|WP_025705270.1\|4901940_4902801_-\|undecaprenyl-diphosphate-phosphatase	unknown	unknown	gnl\|CDD\|234712
NZ_CP009287.1\|WP_025705274.1\|4906572_4907610_+\|NADH:flavin-oxidoreductase/NADH-oxidase	unknown	unknown	gnl\|CDD\|239242
NZ_CP009287.1\|WP_025705271.1\|4903019_4903643_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP009287.1\|WP_025706714.1\|4917547_4918420_-\|radical-SAM-protein	unknown	unknown	gnl\|CDD\|100105
NZ_CP009287.1\|WP_025706712.1\|4916350_4916851_-\|Crp/Fnr-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|223736
NZ_CP009287.1\|WP_042267182.1\|4920621_4921866_-\|STM4014-family-protein	unknown	unknown	gnl\|CDD\|223267
NZ_CP009287.1\|WP_025705276.1\|4908583_4909558_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|340424
NZ_CP009287.1\|WP_025705272.1\|4903657_4905607_-\|FtsX-like-permease-family-protein	unknown	unknown	gnl\|CDD\|376899
NZ_CP009287.1\|WP_025705280.1\|4912788_4913175_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133398
NZ_CP009287.1\|WP_025705273.1\|4905581_4906352_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213222
NZ_CP009287.1\|WP_025706713.1\|4916999_4917551_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|223603
NZ_CP009287.1\|WP_025706716.1\|4919839_4920625_-\|STM4013/SEN3800-family-hydrolase	unknown	unknown	gnl\|CDD\|293767
NZ_CP009287.1\|WP_025705279.1\|4910768_4911503_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_042268233.1\|4899374_4901663_-\|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase	gnl\|CDD\|235367	PRK05222, PRK05222, 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; Provisional.	0
NZ_CP009287.1\|WP_025706715.1\|4918416_4919802_-\|STM4012-family-radical-SAM-protein	gnl\|CDD\|181292	PRK08208, PRK08208, coproporphyrinogen III oxidase family protein.	0
NZ_CP009287.1\|WP_025705275.1\|4907949_4908384_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	5.22716e-10
NZ_CP009287.1\|WP_025705281.1\|4913240_4914065_+\|NAD(P)-dependent-oxidoreductase	gnl\|CDD\|224995	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism].	6.24844e-62
NZ_CP009287.1\|WP_042267180.1\|4909559_4910258_-\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	1.8895e-71
NZ_CP009287.1\|WP_025705283.1\|4915337_4916009_-\|YitT-family-protein	gnl\|CDD\|376838	pfam02588, YitT_membrane, Uncharacterized 5xTM membrane BCR, YitT family COG1284. This is probably a bacterial ABC transporter permease (personal obs:Yeats C).	6.49225e-38
NZ_CP009287.1\|WP_025705282.1\|4914316_4915108_-\|TIGR00266-family-protein	gnl\|CDD\|376704	pfam01987, AIM24, Mitochondrial biogenesis AIM24. In eukaryotes, this domain is involved in mitochondrial biogenesis. Its function in prokaryotes in unknown.	1.74585e-83
NZ_CP009287.1\|WP_025705270.1\|4901940_4902801_-\|undecaprenyl-diphosphate-phosphatase	gnl\|CDD\|234712	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase.	5.98349e-103
NZ_CP009287.1\|WP_025705274.1\|4906572_4907610_+\|NADH:flavin-oxidoreductase/NADH-oxidase	gnl\|CDD\|239242	cd02932, OYE_YqiM_FMN, Old yellow enzyme (OYE) YqjM-like FMN binding domain. YqjM is involved in the oxidative stress response of Bacillus subtilis. Like the other OYE members, each monomer of YqjM contains FMN as a non-covalently bound cofactor and uses NADPH as a reducing agent. The YqjM enzyme exists as a homotetramer that is assembled as a dimer of catalytically dependent dimers, while other OYE members exist only as monomers or dimers. Moreover, the protein displays a shared active site architecture where an arginine finger at the COOH terminus of one monomer extends into the active site of the adjacent monomer and is directly involved in substrate recognition. Another remarkable difference in the binding of the ligand in YqjM is represented by the contribution of the NH2-terminal tyrosine instead of a COOH-terminal tyrosine in OYE and its homologs.	1.50642e-170
NZ_CP009287.1\|WP_025705271.1\|4903019_4903643_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	4.89992e-47
NZ_CP009287.1\|WP_025706714.1\|4917547_4918420_-\|radical-SAM-protein	gnl\|CDD\|100105	cd01335, Radical_SAM, Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. Mechanistically, they share the transfer of a single electron from the iron-sulfur cluster to SAM, which leads to its reductive cleavage to methionine and a 5'-deoxyadenosyl radical, which, in turn, abstracts a hydrogen from the appropriately positioned carbon atom. Depending on the enzyme, SAM is consumed during this process or it is restored and reused. Radical SAM enzymes catalyze steps in metabolism, DNA repair, the biosynthesis of vitamins and coenzymes, and the biosynthesis of many antibiotics. Examples are biotin synthase (BioB), lipoyl synthase (LipA), pyruvate formate-lyase (PFL), coproporphyrinogen oxidase (HemN), lysine 2,3-aminomutase (LAM), anaerobic ribonucleotide reductase (ARR), and MoaA, an enzyme of the biosynthesis of molybdopterin.	0.000423516
NZ_CP009287.1\|WP_025706712.1\|4916350_4916851_-\|Crp/Fnr-family-transcriptional-regulator	gnl\|CDD\|223736	COG0664, Crp, cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms].	2.1356e-21
NZ_CP009287.1\|WP_042267182.1\|4920621_4921866_-\|STM4014-family-protein	gnl\|CDD\|223267	COG0189, RimK, Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) [Coenzyme metabolism / Translation, ribosomal structure and biogenesis].	0.000202103
NZ_CP009287.1\|WP_025705276.1\|4908583_4909558_-\|sensor-histidine-kinase	gnl\|CDD\|340424	cd16948, HATPase_BceS-YxdK-YvcQ-like, Histidine kinase-like ATPase domain of two-component sensor histidine kinases similar to Bacillus subtilis BceS, YxdK, and Bacillus thuringiensis YvcQ. This family includes the histidine kinase-like ATPase (HATPase) domains of various two-component sensor histidine kinase (HKs) such as Bacillus subtilis BceS and Bacillus thuringiensis YvcQ, the HKs of the two-component regulatory system (TCSs) BceS-BceR and YvcQ-YvcP, repsectively, which are both involved in regulating bacitracin resistance. It also includes the HATPase domain of YxdK, the HK of YxdK-YxdJ TCS involved in sensing antimicrobial compounds.	7.69037e-49
NZ_CP009287.1\|WP_025705272.1\|4903657_4905607_-\|FtsX-like-permease-family-protein	gnl\|CDD\|376899	pfam02687, FtsX, FtsX-like permease family. This is a family of predicted permeases and hypothetical transmembrane proteins. Buchnera aphidicola LolC has been shown to transport lipids targeted to the outer membrane across the inner membrane. Both LolC and Streptococcus cristatus TptD have been shown to require ATP. This region contains three transmembrane helices.	2.1385e-06
NZ_CP009287.1\|WP_025705280.1\|4912788_4913175_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133398	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators. Helix-turn-helix (HTH) heavy metal resistance transcription regulators (HMRTR): MerR1 (mercury), CueR (copper), CadR (cadmium), PbrR (lead), ZntR (zinc), and other related proteins. These transcription regulators mediate responses to heavy metal stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	3.65158e-30
NZ_CP009287.1\|WP_025705273.1\|4905581_4906352_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	5.45268e-105
NZ_CP009287.1\|WP_025706713.1\|4916999_4917551_-\|adenylyl-sulfate-kinase	gnl\|CDD\|223603	COG0529, CysC, Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism].	3.09781e-82
NZ_CP009287.1\|WP_025706716.1\|4919839_4920625_-\|STM4013/SEN3800-family-hydrolase	gnl\|CDD\|293767	cd16148, sulfatase_like, uncharacterized sulfatase subfamily. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. The sulfatases are essential for human metabolism. At least eight human monogenic diseases are caused by the deficiency of individual sulfatases.	2.16813e-16
NZ_CP009287.1\|WP_025705279.1\|4910768_4911503_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.60205e-27

>NZ_CP009287.1|WP_025705279.1|4910768_4911503_+|class-I-SAM-dependent-methyltransferase
MKQNKYDEAGFFAKYSAMPRSTGGLEAAGEWSTFRSLLPDLHGKRVLDLGCGFGWHCRYARGQHAESVVGIDLSEKMLERARVMTDDPGIEYRRGAIEDIRFAAGEFDVVISSLAIHYVERFDLLCREVQHCLRPGGSFVLSVEHPIYTALAAQDWHYGPDGAKLHWPLDHYHDEGPREARFLEDDVIKYHRNIATYLNTLINSGFTVTKLSELQPTPEMLEQYAAWHEELRRPMFLLLSAVRN
>NZ_CP009287.1|WP_042267180.1|4909559_4910258_-|response-regulator-transcription-factor
MFKIFIIEDDRGLVMLLQDYLHKFGYETQAVHDFEAVRMEFEQFAPHLVLLDVNLPKFDGYYWCRQIRGLSTCPILFISAREGKMDQVMALENGADDYITKPFDYEIALAKIKSHLRRAYGSYAGGGTERSLTVAGLMLDVERLVLSRGSAKIDLSHTEAKILDELMQKAGTVVTRDRLLEKIWDDQAFVDDNTLNVYVTRVRKKLSALDIADGLQTVRGQGYRLCENWGEA
>NZ_CP009287.1|WP_025705276.1|4908583_4909558_-|sensor-histidine-kinase
MKLFLREQSPLIVIYLAQLLMITLVYRLDGSSGVNVSLYAGLLSTCLLLAYLAYRYFSNRSFYERLLNLPASLDDSGGPAQSSPLAESLRRLLAHQFRLYQNDLHSYRHKLEEHIHFINQWVHGMKTPLSVIHLIIQGKDGPPFTAIGDELDRLKKGLDTVLYTARLDTFEHDFYVERLELAAVVRGVTSEQKRLFIRKRVFPAITVENGLLITSDEKWLSFVLTQLITNALRYTVEEGRFVHFYGYTGEQGRPVLEVRDEGVGIPPGDLPRVFDAYFTGVNGRSFQESTGMGLYLVKQICGKLGHEVGISSEVEKGTTVRIMF
>NZ_CP009287.1|WP_025705275.1|4907949_4908384_+|MarR-family-transcriptional-regulator
MKNPLEGGLITSWLSLTHIQMKVAGELEAKLQENFGWSLNEFYLMFFLSEAPEKKLRLQQLEAMVGLSQSAVSRLVSRFEAKGCGALQRTVCDDDRRSIYTSLTPLGQEKVDRAQVTVNEVLHEAFPRAETKLLLEQMLQLPQQ
>NZ_CP009287.1|WP_025705274.1|4906572_4907610_+|NADH:flavin-oxidoreductase/NADH-oxidase
MKDLFTPYELQDLKLKNRVVMPPMCQYSVANKDGIATDWHYNHYVSRAVGGTGLIIMEMTDVDPDGRITDYDLGIWSDDHIPALARIVEACHSYGAKVGVQIAHAGRKAEDAPLPVAPSAIPFSAEYKTPRELTTEEVKAMVQKFQAGVERAVQAGFDVIELHGAHGYLIHQFHSPLTNKRTDEYGKDLTRFGREVIQAAKKVMPEGMPLIMRISAQEYVEGGYGLRESVEIGRAYKEAGADIFHVSAGGEGAIAAEGKPGTHAAYQVPLARAFKHELNVPVIAVGRLDEAVLANAVIGNDEADLVAVGRGMLRNPYWTLEAGVQLGKDAGLPKQYELGFPRSRR
>NZ_CP009287.1|WP_025705273.1|4905581_4906352_-|ABC-transporter-ATP-binding-protein
MPILDVHNLSKIYEGKVSTHALNHIRFAVEKGEFVGIMGPSGSGKTTLLNVIATIDEPTSGEVMVNGRNPGELGSKDKALFRRKELGFVFQHFNLLDTLTVEENVVLPLTLAGFTVKEMEKRLGEVADRLGIRALLDKRTCEISGGQMQRVAIARAMIHRPSLILADEPTGSLDSKAAGEVMNLLAEVNGAEGTTVLMVTHDAVAASFCHRVIFIKDGRFHSEMYRGSSRAAFFQNIIDMLSLLGGAGHELPAVRL
>NZ_CP009287.1|WP_025705272.1|4903657_4905607_-|FtsX-like-permease-family-protein
MNFRQFAYRNVARNKRKYAAYFVSSAFSVMVFFLCALFIYHPAISQDMILGAAARTMMAAEAIIYLFCSLFVLVSVGSFLQSRKLEFGILLMHGMTKRQLKLMVFLENMMIGSLAILTGTLLGLLLGKLFLMIGSGFLGIEPLEFHLSWQAPVLTICSFVLLFMLISLLTFAFIGSESPHGLFRGGGRGETEPKVSGGLALLSGLLLLAGYALAAATTAATVEIMMFPVVLITVSGTYLFYTQLSLYIVGVLRKLRRFYWKHTHILTFSGLSYRWKDNGRMFFMVTIVSAVSFTSVGVFASIHTLSRELKLDYPAAVGYVAKGGGYVSSEKQDLQGITAELERLDLPYETLRIPLKYAAIVSQTGPDHTKQLPLMSYSNYKLALRHAGFISDEPPLEGNKGLVMIGSQRDRSLTAARFKATYSLKQGIQIQEIGYTQHVPIAEYLLPELDGRGGGDFSGLVVSDSLYNGIVPVHQDWYTGFYMEDFPRTTGVASELAATGKVPYEAKSPFAVVISGTLFEIQRTLYSTMLFASLLVGTVFFIAAGSFLYFRLYMDLDHDRLQYSTLSKMGLTDRELDRIATLQLALMFFVPVLLAVLHSLFAFIALQRLFYLSIAAETGAVLTGYLAAQTLYFFFIRSRYLRNLKKNLI
>NZ_CP009287.1|WP_025705271.1|4903019_4903643_-|DedA-family-protein
MKTWITDIMEQFGYAGIFLMLALENIFPPIPSEVILPFGGFMTTTSGLTIPGVLIASTAGSLLGAVILYWIGRLLDVSRMERIVDRYGKWIRINKSDIRKADAWFDKYGYWTVLFCRMVPLVRSLISIPAGMSGMKFGLFMLFTAIGTLGWNTLLILLGAALGESWEDIGGYIDTYSSVVYVLLAGGILVLGLLYLRKRRTAGKARS
>NZ_CP009287.1|WP_025705270.1|4901940_4902801_-|undecaprenyl-diphosphate-phosphatase
MELLTIIKAIILGIVEGLTEFAPVSSTGHMIIVDDMWLKSMDFLGKYTANTFKVVIQLGSILAVVVIFRNRFIDLLGLKRFSRKELTAVPEGQPAVETAGRLKLAQVIVGLIPAGVLGFLFEDYIDEHLFSTATVLIGLVVGAILMICADLFAPKKIKAESVDQITYRQALSVGLIQCLSLWPGFSRSGSTISGGVLLGMSHRAAADFTFIMAVPIMAGASLISLLKNWQYFTLDALPFFIAGFISAFLFALLSMRFFLKLINRIKLMPFAIYRIILAAVVYLVWF
>NZ_CP009287.1|WP_042268233.1|4899374_4901663_-|5-methyltetrahydropteroyltriglutamate---homocysteine-S-methyltransferase
MTNKITTSNLGYPRIGKNREWKKALEAYWSGKVSEQDFLAQMAGIQLQHLQSQQKAGIDLIPVNDFTYYDHVLDTAVMFGVVPQRYAYNGGAVPLDLYFAMARGSASAPACEMTKWFNTNYHYIVPEIGSLTPQLTENKPLAAYRFAKTQAGIEGKPVIVGLYTFLKLSKGFPAAETGEVAARFLPVYIQLLQELEQEGVAWVQIDEPAVVTGLAPEDIELLKTIYGAISAAVPGLKLILQTYFEAAEPLEALLELPVQAIGLDFVHDGGANLEAVERLGWPADKWLGAGIIDGRSIWRADPDAKLGLIQKLAAHVPLDRLILQPSSSLLHVPVTVQSESKLKPAVKQALAFADEKLAELGLLAAAAGGGNGNAAAQLAESREALAAFRALPERGRQDVAEQVRRLDALPDSRSLPFAERVKLQQAKWKLPLLPTTTIGSFPQTAEVRQARLKWRKGVWNEERYDAFVRRQIAEAITLQEELGLDVLVHGEFERTDMVEFFGEKLAGYLFTQNGWVQSYGSRCVKPPVIYADVAFIQPMTVKESVYAQSLTRLPVKGMLTGPVTILNWSFVRDDLSREEVAKQIALALRHEVQALEDAGIEMIQVDEPAIREGLPLKAEDHEHYLNWAVRSFRVATNHVKDTTQVHTHMCYSEFNDMIGAISAMDADVISIETSRSHGELIAAFENDDYDKGIGLGVYDIHSPRVPEVEEMTQNIERALRVLDAGQFWINPDCGLKTRGWEETEAALRNMVLAAANVRKNNA
>NZ_CP009287.1|WP_025705280.1|4912788_4913175_+|MerR-family-transcriptional-regulator
MDRMRIGELTERAGVTQRTVRYYESIGLLPSGEREGNGHHYYTEETVARLRKIDQLKTLGLSLEEIRDVIGLYFTDPSGIQPKRKVLGLLHQHLADTDKKLEALGQFRADLQSHIERFERWLETNDRA
>NZ_CP009287.1|WP_025705281.1|4913240_4914065_+|NAD(P)-dependent-oxidoreductase
MSENIGFIGLGLLGLPIAANLLQARYALTVYNRTADKAKPLVAQGALQAARPADTVTAGGIVVTLVWDDEALESIVGSEDFLERLGPGGIHVSMSTVSPDTGRKLADLHARHGSVYVEAPVFGRPEAAAAKQLWIPVAGPQEAKERVRPVLEAMGAKGIFDFGEEAGTAVLVKLIGNFLIVSAGRSLEEALGMAERGGADPKAVAEMLTSTLFPAPIYQSYGKMIAEKTANLSESKIPQKDVGLFLAAAQNAHFPAPLAGQLLDMLEGGDRSRQ
>NZ_CP009287.1|WP_025705282.1|4914316_4915108_-|TIGR00266-family-protein
MSAHEIDYVIMGEEIQCVEVQLDPGESVIAEAGSFMMMDPEITMETIFGDGTGSRGGGLMGKLMGAGKRLLTGESLFMTIFTHSGAYGRKSVTFAAPYPGKIIPLDLQQHGGKIICQKDSFLCAAKGVSIGIEFQRKLGAGFFGGEGFIMQKLEGDGLSFVHSGGYVMERTLQAGETIKLDTGCLVAMTSSVDYNIEFVKGVKTALFGGEGLFFATLRGPGKVWVQSLPFSRMADRILSAAGNSGRKEEGSILGGLGNLLDGR
>NZ_CP009287.1|WP_025705283.1|4915337_4916009_-|YitT-family-protein
MRKQDSGMGMPLRLTVILSGTLLLAFTYYHINYQNHLTEGGFVGLSLLGKYVLGISPSLSILILDIPVLLIAMIFKGRAFVLNTFISVGAFTVFYSLMERYSGWVINLQDNLPLAALLSGVLTGLGAGMVLRGGGASGGDDILSLLISEWKGIKVGTVFILMDVIVLALSLFYMPLKETLYTVIAVVVAGYVITFTTSLGRPKLSKAPTIQPTLSKPHDGTVM
>NZ_CP009287.1|WP_025706712.1|4916350_4916851_-|Crp/Fnr-family-transcriptional-regulator
MILHKGEVLFRQGDACQNLFQVKSGLFKVTRLHENGNMVLFNLLYPGETVPHHSLISPKEAHGTAVAMMKSEVELVPAAEWYRELREDPDKVMEIALLLQEKVRFMQTRLDHLTVGTPGERLDLLKRWLLEYSHGAELTDLLTQEEIGQLIGVRRETVNRLLRNPG
>NZ_CP009287.1|WP_025706713.1|4916999_4917551_-|adenylyl-sulfate-kinase
MSVQRGITLWLTGLSGAGKSTVAALITDRLRAAGQAVEWLDGDELRRSIGHGLGFSREDRFENIRRAVYVAELLNRHGVITVISLISPYAEMRSYARQQLHEFVEVYVNCPLEICEARDVKGLYAKARCGGLPSFTGISDPYEVPASPELTLYTAKHPPEDCADELLAWLENRYSALLSRTGN
>NZ_CP009287.1|WP_025706714.1|4917547_4918420_-|radical-SAM-protein
MKAVLYYRGALTSCNYDCPYCPFGKTRDSAERLAKDRAELETFVRWVSDQGAGGHRLSIFFNPYGEALIHRWYREAMITLSNLDHVDKVAIQTNLSAGLDFTARLNPHKAAFWATYHPGQVAEQRFLAQCMAVYEQGIPFSVGSVGIRSSFEAIASLRAALPEEVYLWVNAYKDKPNYYTGEDIAFLSGIDPHFVLNTRDYESLGKACNAGSNVFYVQGPGQVKRCYKDRGVIGNLYRDGLEGLSVERSCRMMVCDCYIGYIHMPELKLQQVYGAGLLERIPYGVREGRE
>NZ_CP009287.1|WP_025706715.1|4918416_4919802_-|STM4012-family-radical-SAM-protein
MTSTQPPLHLRDDGRTPFPSEDVTQWRERITAEAYRNYLYSYPHKTAYRDLNPPVPLEPLWREEPAESFFLYMHIPFCGARCGFCNLFTLPDKRAEVHTVYVNALERQARQWAAFTGSKPFARFAIGGGTPSLLAPAQLRRLFGIAEDIMGLDAATASISVETSPETLTEEKLNILKEHTVDRVSMGIQSFVAAESAAIYRPQNPDVVYRALELLKQYDFPILNLDLIYGLPGQTVESWLFSLQQAVNQGPEEIFIYPLYTRHHTIVKPEDIQRQPDIRHECYQAAQLLLTGHGYTQYSMRRFAKETAGTHKPILDYSCQEEGMVGLGCGARSYTRNVHYASRYGVSRKATESIIADYVSAERYDTADYGIMLSLEEQKRRFILKAVLHSEGLKLADYSGRFASSLWRDYPELGLLLQSGLGREEDGILRLTPEGLGYSDSIGDWFISGEIRKQMERFVLP
>NZ_CP009287.1|WP_025706716.1|4919839_4920625_-|STM4013/SEN3800-family-hydrolase
MTDMNAVIGSHDLLMITLDTLRYDAAVLEEANCPNLCGTGSWEKRHTPGSFTYAAHHAFFGGFLPTPATTDKSRHVRLFHSRNTGMKTHPHTWLFDTPDVVSGLAAEGYRTLCIGGVIFFSKKVPLARVLPGYFQHSYWRMTFGVTNPRSTEHQVNHALKLLKDTPLDQRLFLFLNVSAIHGPNHYFVPGARKDSIDTQRAALRYVDGELGRLFDAFRERGNPVFCLAFSDHGEAFGEEGYHGHRLAHETVWNVPYREFFL
>NZ_CP009287.1|WP_042267182.1|4920621_4921866_-|STM4014-family-protein
MKKTRPLIVIGIPGDKRTGGIQQARSRLGLPPAIILPYTGLLAGQTLAGLLAAEGCLDLANGPAPGTPAPLLRLDSPGGSFEVERALIMLGAPDAGASSDALHPFGQKPDPYPLSCRTAGKLRDMPGVLHHPSQWFRGYCRLLARLREEAALLLPDSRWLNDPQDIADMTDKRRTQQLLAAADVRIPRPLSAEQALEDYSSIREQMIRQRMHRVFIKLACGSAASGVIAYQVNPSTGAEIAVTTVGVENYITRPPVYYNSGKLRRYTDSRTIAGLINWLCRHGAYAEQWIPKSGAGGTSLDIRQLVVLGEACHSIARVSTTPITNLHLRSRRMSPEAAGLSGETQEQVRNTAVHALAAFPGSSVAGIDVLVSAGSQLTYAADVNPFGDLLYDVEYQGFGTYEWEMKQLIKEGHL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_26

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_26

5499888-5499962

Unclear

Consensus_repeat	Method
AAGTGGAAAAAGGGTAACTAATT	CRISPRCasFinder

1 spacers

Cas14u_CAS-V

The CRISPR arrays of NZ_CP009287_26

>merge|NZ_CP009287|26|5499888-5499962|CRISPRCasFinder
AAGTGGAAAAAGGGTAACTAATTTGCTCGTCCCACCATGTTCCGCGCAGGTTAAGTGGAAAAAGGTTAACTAATT

>NZ_CP009287|26|21|5499888-5499962|CRISPRCasFinder
AAGTGGAAAAAGGGTAACTAATT	TGCTCGTCCCACCATGTTCCGCGCAGGTT
AAGTGGAAAAAGGTTAACTAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_042267302.1\|5482725_5486361_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|213246
NZ_CP009287.1\|WP_025706653.1\|5502625_5503063_-\|NUDIX-domain-containing-protein	unknown	unknown	gnl\|CDD\|239645
NZ_CP009287.1\|WP_081758886.1\|5509801_5510089_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|183582
NZ_CP009287.1\|WP_025706803.1\|5508177_5509842_-\|DUF4179-domain-containing-protein	unknown	unknown	gnl\|CDD\|379369
NZ_CP009287.1\|WP_042267300.1\|5479348_5479708_-\|histidine-triad-nucleotide-binding-protein	unknown	unknown	gnl\|CDD\|238607
NZ_CP009287.1\|WP_036705646.1\|5500249_5502496_-\|Ig-like-domain-containing-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708700.1\|5491856_5495384_-\|helicase-exonuclease-AddAB-subunit-AddB	unknown	unknown	gnl\|CDD\|213736
NZ_CP009287.1\|WP_174469033.1\|5507397_5508027_-\|DNA-3-methyladenine-glycosylase-I	unknown	unknown	gnl\|CDD\|377025
NZ_CP009287.1\|WP_025706801.1\|5506250_5507312_-\|50S-ribosomal-protein-L11-methyltransferase	unknown	unknown	gnl\|CDD\|283886
NZ_CP009287.1\|WP_042268307.1\|5504643_5505408_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	unknown	unknown	gnl\|CDD\|236959
NZ_CP009287.1\|WP_025706805.1\|5510208_5511120_-\|PAS-domain-containing-protein	unknown	unknown	gnl\|CDD\|206779
NZ_CP009287.1\|WP_025706654.1\|5503296_5504640_-\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	unknown	unknown	gnl\|CDD\|223694
NZ_CP009287.1\|WP_025708702.1\|5497176_5498577_-\|class-I-SAM-dependent-rRNA-methyltransferase	unknown	unknown	gnl\|CDD\|224017
NZ_CP009287.1\|WP_025706800.1\|5505555_5506248_-\|site-2-protease-family-protein	unknown	unknown	gnl\|CDD\|100079
NZ_CP009287.1\|WP_025705192.1\|5481799_5482516_+\|acetolactate-decarboxylase	unknown	unknown	gnl\|CDD\|341211
NZ_CP009287.1\|WP_025708701.1\|5495765_5496776_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	Cas14u_CAS-V	-	gnl\|CDD\|223747
NZ_CP009287.1\|WP_025705193.1\|5480080_5481769_+\|acetolactate-synthase-AlsS	unknown	unknown	gnl\|CDD\|236312
NZ_CP009287.1\|WP_025705010.1\|5486362_5487544_-\|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl\|CDD\|273178
NZ_CP009287.1\|WP_042267303.1\|5487702_5491860_-\|UvrD-helicase-domain-containing-protein	unknown	unknown	gnl\|CDD\|274299
NZ_CP009287.1\|WP_042267305.1\|5498676_5499666_+\|Na/Pi-cotransporter-family-protein	unknown	unknown	gnl\|CDD\|224202

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_042267302.1\|5482725_5486361_-\|AAA-family-ATPase	gnl\|CDD\|213246	cd03279, ABC_sbcCD, ATP-binding cassette domain of sbcCD. SbcCD and other Mre11/Rad50 (MR) complexes are implicated in the metabolism of DNA ends. They cleave ends sealed by hairpin structures and are thought to play a role in removing protein bound to DNA termini.	3.10931e-39
NZ_CP009287.1\|WP_025706653.1\|5502625_5503063_-\|NUDIX-domain-containing-protein	gnl\|CDD\|239645	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily. Ap6A hydrolase specifically hydrolyzes diadenosine polyphosphates, but not ATP or diadenosine triphosphate, and it generates ATP as the product. Ap6A, the most preferred substrate, hydrolyzes to produce two ATP molecules, which is a novel hydrolysis mode for Ap6A. These results indicate that Ap6A hydrolase is a diadenosine polyphosphate hydrolase. It requires the presence of a divalent cation, such as Mn2+, Mg2+, Zn2+, and Co2+, for activity. Members of the Nudix superfamily are recognized by a highly conserved 23-residue nudix motif (GX5EX7REUXEEXGU, where U = I, L or V), which forms a structural motif that functions as a metal binding and catalytic site.	4.54534e-28
NZ_CP009287.1\|WP_081758886.1\|5509801_5510089_-\|hypothetical-protein	gnl\|CDD\|183582	PRK12543, PRK12543, RNA polymerase sigma factor; Provisional.	4.9746e-13
NZ_CP009287.1\|WP_025706803.1\|5508177_5509842_-\|DUF4179-domain-containing-protein	gnl\|CDD\|379369	pfam13786, DUF4179, Domain of unknown function (DUF4179).	1.0499e-14
NZ_CP009287.1\|WP_042267300.1\|5479348_5479708_-\|histidine-triad-nucleotide-binding-protein	gnl\|CDD\|238607	cd01276, PKCI_related, Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the ubiquitous HIT family of hydrolases that act on alpha-phosphates of ribonucleotides. The members of this subgroup have a conserved HxHxHxx motif (x is a hydrophobic residue) that is a signature for this family. No enzymatic activity has been reported however, for PKCI and its related members.	3.41937e-52
NZ_CP009287.1\|WP_025706800.1\|5505555_5506248_-\|site-2-protease-family-protein	gnl\|CDD\|100079	cd06158, S2P-M50_like_1, Uncharacterized homologs of Site-2 protease (S2P), zinc metalloproteases (MEROPS family M50) which cleave transmembrane domains of substrate proteins, regulating intramembrane proteolysis (RIP) of diverse signal transduction mechanisms. Members of the S2P/M50 family of RIP proteases use proteolytic activity within the membrane to transfer information across membranes to integrate gene expression with physiologic stresses occurring in another cellular compartment. In eukaryotic cells they regulate such processes as sterol and lipid metabolism, and endoplasmic reticulum stress responses. In prokaryotes they regulate such processes as sporulation, cell division, stress response, and cell differentiation. This group includes bacterial, eukaryotic, and Archaeal S2P/M50s homologs with a minimal core protein and no PDZ domains.	3.33298e-52
NZ_CP009287.1\|WP_025708700.1\|5491856_5495384_-\|helicase-exonuclease-AddAB-subunit-AddB	gnl\|CDD\|213736	TIGR02773, ATP-dependent_helicase/deoxyribonuclease_subunit_B, helicase-exonuclease AddAB, AddB subunit. DNA repair is accomplished by several different systems in prokaryotes. Recombinational repair of double-stranded DNA breaks involves the RecBCD pathway in some lineages, and AddAB (also called RexAB) in other. The AddA protein is conserved between the firmicutes and the alphaproteobacteria, while the partner protein is not. Nevertheless, the partner is designated AddB in both systems. This model describes the AddB protein as found Bacillus subtilis and related species. Although the RexB protein of Streptococcus and Lactococcus is considered to be orthologous, functionally equivalent, and merely named differently, all members of this protein family have a P-loop nucleotide binding motif GxxGxGK[ST] at the N-terminus, unlike RexB proteins, and a CxxCxxxxxC motif at the C-terminus, both of which may be relevant to function. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP009287.1\|WP_174469033.1\|5507397_5508027_-\|DNA-3-methyladenine-glycosylase-I	gnl\|CDD\|377025	pfam03352, Adenine_glyco, Methyladenine glycosylase. The DNA-3-methyladenine glycosylase I is constitutively expressed and is specific for the alkylated 3-methyladenine DNA.	1.20575e-127
NZ_CP009287.1\|WP_025706801.1\|5506250_5507312_-\|50S-ribosomal-protein-L11-methyltransferase	gnl\|CDD\|283886	pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA). This family consists of several Ribosomal protein L11 methyltransferase (EC:2.1.1.-) sequences.	4.39214e-107
NZ_CP009287.1\|WP_042268307.1\|5504643_5505408_-\|16S-rRNA-(uracil(1498)-N(3))-methyltransferase	gnl\|CDD\|236959	PRK11713, PRK11713, 16S ribosomal RNA methyltransferase RsmE; Provisional.	1.96535e-83
NZ_CP009287.1\|WP_025706805.1\|5510208_5511120_-\|PAS-domain-containing-protein	gnl\|CDD\|206779	cd11386, MCP_signal, Methyl-accepting chemotaxis protein (MCP), signaling domain. Methyl-accepting chemotaxis proteins (MCPs or chemotaxis receptors) are an integral part of the transmembrane protein complex that controls bacterial chemotaxis, together with the histidine kinase CheA, the receptor-coupling protein CheW, receptor-modification enzymes, and localized phosphatases. MCPs contain a four helix trans membrane region, an N-terminal periplasmic ligand binding domain, and a C-terminal HAMP domain followed by a cytoplasmic signaling domain. This C-terminal signaling domain dimerizes into a four-helix bundle and interacts with CheA through the adaptor protein CheW.	4.05645e-33
NZ_CP009287.1\|WP_025706654.1\|5503296_5504640_-\|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB	gnl\|CDD\|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	0
NZ_CP009287.1\|WP_025708702.1\|5497176_5498577_-\|class-I-SAM-dependent-rRNA-methyltransferase	gnl\|CDD\|224017	COG1092, COG1092, Predicted SAM-dependent methyltransferases [General function prediction only].	1.90094e-126
NZ_CP009287.1\|WP_025705192.1\|5481799_5482516_+\|acetolactate-decarboxylase	gnl\|CDD\|341211	cd17299, acetolactate_decarboxylase, alpha-acetolactate decarboxylase. alpha-acetolactate decarboxylase (AldB, E.C. 4.1.1.5) converts acetolactate ((2S)-2-hydroxy-2-methyl-3-oxobutanoate) into acetoin ((3R)-3-hydroxybutan-2-one) and CO(2). Acetoin may be secreted by the cells, perhaps in order to control the internal pH. AldB may function as a regulator in valine and leucine biosynthesis and in catalyzing the second step of the 2,3-butanediol pathway. The structure of this domain displays an alpha-beta-beta-alpha four layer topology, with an HxHxxxxxxxxxxH motif (x could be any residue) that coordinates a zinc ion.	7.24448e-118
NZ_CP009287.1\|WP_025708701.1\|5495765_5496776_-\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	6.20198e-25
NZ_CP009287.1\|WP_025705193.1\|5480080_5481769_+\|acetolactate-synthase-AlsS	gnl\|CDD\|236312	PRK08617, PRK08617, acetolactate synthase AlsS.	0
NZ_CP009287.1\|WP_025705010.1\|5486362_5487544_-\|exonuclease-SbcCD-subunit-D	gnl\|CDD\|273178	TIGR00619, Nuclease_SbcCD_subunit_D, exonuclease SbcD. All proteins in this family for which functions are known are double-stranded DNA exonuclease (as part of a complex with SbcC homologs). This complex functions in the initiation of recombination and recombinational repair and is particularly important in regulating the stability of DNA sections that can form secondary structures. This family is likely homologous to the MRE11 family. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	1.85409e-74
NZ_CP009287.1\|WP_042267303.1\|5487702_5491860_-\|UvrD-helicase-domain-containing-protein	gnl\|CDD\|274299	TIGR02785, ATP-dependent_helicase/nuclease_subunit_A, helicase-exonuclease AddAB, AddA subunit, Firmicutes type. AddAB, also called RexAB, substitutes for RecBCD in several bacterial lineages. These DNA recombination proteins act before synapse and are particularly important for DNA repair of double-stranded breaks by homologous recombination. The term AddAB is used broadly, with AddA homologous between the Firmicutes (as modeled here) and the alphaproteobacteria, while the partner AddB proteins show no strong homology across the two groups of species. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP009287.1\|WP_042267305.1\|5498676_5499666_+\|Na/Pi-cotransporter-family-protein	gnl\|CDD\|224202	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism].	5.39709e-54

>NZ_CP009287.1|WP_042267305.1|5498676_5499666_+|Na/Pi-cotransporter-family-protein
MIRDLLFPVIYGLVIFLAGMKLMEAALAKLAGPLLTRSLHKATSTPLKGLIASSLLSALLQSSTAVTVLTIGMVNAGLLTYARTLGIILGSNIGTCLTTELIGLQISQMVAPLLVVSLCLWAAAVMLGELPAPSPRAAAACRRLSTPLQFTSLAAAGFSLVLWGIAVMQSIGPALQASGLFRWFLDHAATSALWGLAAGACLTAMLHSSAAVIGMAMGLASSGVMPPGLGIAIVLGANVGTCVTAVIAAIGGSASGKFVAGSHVALNVGGALLFLPFIQQLQVLSAWIGGGPATQLAHAQTIFNVVCSLGVLPLCYLPVWTRLEKRLQS
>NZ_CP009287.1|WP_025708702.1|5497176_5498577_-|class-I-SAM-dependent-rRNA-methyltransferase
MASVILERSRKKRLEQGHPWVYASEVASVDGEPQPGGLVDVLNHQGRYLATGYYNPASQIRVRILDRNPLAAMDTAFFAERFASCLRHRQRFLPGADAYRLVYGEADFLPGLIIDRFGEVLVVQLLTLGMDKCRDQIVQALVEVVVPRGIYERSDVSVRELEGLEQRTGVLYGECPRHITVSENGLKVIVDIEEGQKTGYFFDQRENRASIAPLIQGWGGRSGITLQEVAAEDGTVQTLPVNKSGKPVTFPYWDGATVLECFAHTGSFTLHACKYGAKKVTCLDVSAHAIESAKANVELNGFSDRVEFVVDDAFAFLRNQVKGLEERSERATGKTDANPGAKPAAAKTDTAKPMTAGGGRTWDVVILDPPAFAKTKSAVAGACRGYKDINLHGMKLVNEGGYLVTASCSYHMQPQLFLDTIAEAAKDAGKVLRLIEWRAAGKDHPQILGVDEGHYLKFAIFEVRSK
>NZ_CP009287.1|WP_025708701.1|5495765_5496776_-|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MELKLLSREYIRVINSLTEQAEKEGSFPKLTTKDVEAKLPSAVLNQAIRDAKSVFKKTKKEKKRPILRKPTYYINNQNYSIGHASIAFPIIVDNKVKKTIFPALLTERDQQFLQNATCGLMRIVEKSGKWFAQVSLEIPTETTTGEQVIGIDLGLKVPAVAVTSEGKTRFFGNGRENKYMKRKFRSERKGLGKKKKLRAIRKLDHKEQRWMKDKDHKVSRQIVNFAIKNQVSVIHLEKLTNIRKTTRTSRKNEKNVHTWSFYRLAQFIEYKAKMAGIKVEYVNPAYTSQKCPSCSTLNKAIDRKYSCPCGFHTHRDKVGAMNIIHAPVIGGHSQSA
>NZ_CP009287.1|WP_025708700.1|5491856_5495384_-|helicase-exonuclease-AddAB-subunit-AddB
MTVHFLIGRSGSGKTTKIWETVSSRLEAEPLGAPMIVLVPEQGSFGAEQGLLKTGKTKGSIRAQTLSFSRLAYRVKQETGGSASLPISEEGKKMLIYKIISRRKEELKLFGASSDRPGFVERLSQLHTELKRCCLGAADLEEQLLGMSDSALRSPILASKLEDLHIVFSELEQEMSQLYIDEEDRLAELAEHIQESSYIRGSEIWVDGFHGFTTQEFAVLRELMQYAAKVTISLTLDRSYPPGLQPHELELFHPSAVSYIKLRGMAEEMRLSVWDELLAPPVLPRFAGSPVLAHLERGFGRRNRWSGTASAVAEAITLTAAASRRAEVEGSLREMLRLAREEGVKYGEMAVFMRNIADYEQLVAPLFQDYGIPFFLDQKMNELHHPLVEFIRSAFDVVRRRWRYEDVFRCVKTELLLPLDRSVTRADMDALENYVLACGIQGYRWTDGRSWKGIPSLSLEGARVVDEELLARMEACREVITGPLQAFEQRIKKSRSGLELCKAVYFLLQDMDAARKLERMSAQALELGQPEAAREHTQLWGAVLDLLDQIAEMMGNERMEFDVFAGVLETGLAELKMGLVPPALDQVLVGTMDRTRVSGVKYAFLLGFNEGVVPAQFKEDGILSEGERLLLENSGMELAPGSSRKLLDERFLIYNTLTTASRKLWISYATADEEGKALLPSEIIRQLHGMFPGALKEYFVSGFPSSAAGSSDDTENLEALHMSFVSQPEQTLRMLIMQLRQYRQGVEIPAVWWDVYNWFITDAEHGPKLERLLGSLFYRNEGIRLKRETSLRLYGGTTLRGSVSRMEKFVACAFSHFASYGLRLKERQLYKLKAPDIGQLFHAALSDMAQRLQKQGRSWGSMSAEECRREAGETVDRLSPLLQGEILMSSKRYGYISRKLKNIVGRASVILGEHARRGSFEPVGLELDFGPGKDLPPLRITLPNGCVMEVVGRIDRVDMAEGEQGILLRVIDYKSSHKDLKLHEVYYGLSLQMLTYLDVLLTYSEQWLGQTALPAGTLYFHVHDPLLTSANGMNREQAEQELMKRFKMKGLLTADREVVSLMDTALDKGHSSIVPVALKSDGSFYSSASVATPEQWGHLLSSVRSTISDIGTRITEGDVAIQPYRIQQETACTFCSFRPVCQFDEAVEGNAYNNLGKPGKEVIWDLLSREGGEKP
>NZ_CP009287.1|WP_042267303.1|5487702_5491860_-|UvrD-helicase-domain-containing-protein
MIRRAEIEPKPKGSLWSDDQWRAIAESGDDILVAAAAGSGKTAVLVERIIRKISNEKNGFSVDRLLVATFTKAAAAEMRQRIREALERKLEEESSGEEEGNHGNEHLRRQLALLGRASITTLHSFCLEVIRRYYQLIPIDPGFRILNEHEAEMMRQELLEELLEEKYGEVAEDGEDTVFVRLADWFSGERSDDAVHSLIQRLHDFARSHPWPALWLRDTAADFSLPDTDALSRTSWVQSILAEAKLTLDGAASQLRQGREIALQPGGPAPYADNLAADLEMVQSLQEALEFRPWAELYDIFIEISFGKLKACKKDSTDPGLQERVKELRDNVKKSLLELQKSLFGRPAEAFLGELHEAAPLMRELAETVIEFGERYRIEKAGRGLVDFSDLEHYCLQILRHEDSEPGHSLPSDAAMEYRDQFDEVLLDEYQDTNSVQEEIVRLISRESPGNRFMVGDMKQSIYRFRLAEPGLFLDKYKSFGSAADSSNDALTGSREAAGAVEALEPGKPGGGSVIDLARNFRSRLEVVNAVNMIFRQIMDSTVAEISYDERAELVYGAHFPGAAENGPDTYFAPELLLIDRGTSLSSRAEETAEDGELPPQENEAMESETAQLEARAIVRRISQMTGMSGGEPLMIYDKALKIMRPVVYGDIVILLRSARIWTPLMVEELRLEGIPAYGDQNKGYFQATEVEIALSLLQIVDNPRQDIPLAGVLRSPVVNLREEELAAVRLCSDGSFFDAVLAAAGERIESENGLGEHHAFKSGAAHAADHAAPSEESPAEGGPLAGKMAGEAAMPEISGKLQKKLQVFLKRLEGWRTAARQGSLSTLIWRIYAESGYLEWVGGLPGGFQRQNNLTALYDRAVQFEKDTNARGLFRFLVFISRLRENGGDLGAAGGTGEEAGGVRIMTIHKSKGLEFPVVFLAGMAKPFNRQDLYSPFLMHKELGFGPRFVERETRVSYPTLPYLAISRRSRLELLAEEMRVLYVGLTRPRDKMILVGTVRDLPRTLAGWSSVQGREQMLLEDHMLARGRSYLDWVGPALIRHPSAAVLRKLAGTNGPVSAVLHGDASNWSISAVNAQELSSGSALAASGTGDQNEERQAVLESLRHGRSVPKRSAAREAEVTERLKWVYPYAAASGIPAKTSVTELKSMLSMQEQPSYDLLEESLPAGAGHSLASRTAGTDSLHLQRPKFMEKRGLSPSERGTAYHTVMQHVPLEGEVDRSVLEATIARLTRLAILTGEQAEAVEISDIEAFYTGEMGRRLIGASWKVREQPFSYMVPAGKAYHGLEYLNEAASGLETPAGNASFGESVLIQGVIDCLFREEGQLILLDYKTDAVLEHQGGLESLKEKYRFQLELYSKALLDILGEPVREIWLYFFDGGHAVKL
>NZ_CP009287.1|WP_025705010.1|5486362_5487544_-|exonuclease-SbcCD-subunit-D
MRILHTGDWHLGRMLEGRSRQKEQEQFIDELVEIADASQADLILMAGDVYDSVNPPAAAEQLFYDAAARLTANGRPLVVISGNHDQPERVASVSPLVRRQGITLVGMPTSEPVTVHAVRTGEVAKIAALPYPSEARLGELLAGDAGEDELRLAYSARVGRLMNLLGREFTPQTVNLAMSHIYVLGGVESDSERPIQVGGAYTVDPSALSCGAQYTALGHLHRAQRVKGGNMIRYSGSPLAYSFSEAGQAKSVAMIEVAPGGEPSFEEIYLRCGRPLVNWKSSGGLQEVYGWLDEGRDATAFIDLELRLTEAMSLNDIQRLRKSREGIIHIRPVYPQMEQELEEMARSRMPVQELFRRFYQRQTGGAEPEDSLIELFLELAEEERREPVEGEEN
>NZ_CP009287.1|WP_042267302.1|5482725_5486361_-|AAA-family-ATPase
MKPILLKVAGLQSYREQQEIDFGSLTETGLFGIFGPTGSGKSSLLDAITLAMYGKVERAVNGTQGIMNHSEDQLSVAFTFELTSSSGPRRYRVERKFKRTGDQSVSNTISRFIEIAADGDHVMADKLADVTRCVEEHIGLKMDDFTRAVVLPQGKFAEFLSLRGVDRRQMLQRLFHLEQYGDGLALKLSRRVKENEAALRALEAEQQGLGSAGKADVEAAAERLQEAVRQAADCRKRLDEAVQRAERYARIRELQDERARREEQLQALLAQEADILLLEQKLSKSDEAGKMLPALKAWRSAEEAWKSRLARAEGQEVQAAAAERKAAELAAAEAAAQAALAAEEPALRQGADTYRRALELEAELGGLRHERAAVLERRDEASRGLAARRESMARERELLAKGQKRQHELQQSLQPLAVRSQERQSLQEAMQRLQGLRSASSQRETAERERAERAAVLAAAEARLAAAGERQRSLEAQRGGGIAAAALHLEQLRAGEAAAEAAAGQLELHGSTLAAALKGQELHRLSLSLASELQDGQPCPVCGSLHHPTPALAEDSGGREELERRLEQSRTLGRRATETRHWFRSLLEQDLAWLEQVYGEGAAESFAAPAAAGMEHRGGATLSAGPSSLAAGLDSLDLSRPSGSSSLAAGLDSFDLSRPLGSSSPEAALSSIDSSPGSASSGPGAASVSPGGPVPSSSATVPEEQALSRLEAEFSALKARSGELRRVAAEWQRSLQEQQQLGHKEAAAVEAEAVWLQGLTAKAGELDRQMGQLREEWSQLFPELAPDEAEHAYREMLKKDEQAEEIRGRLEISVKFLDDKSTSVQALQEEIAALDKDLAQWNAQLEGKEALEREKEQRLLQWTGGRAAAALLAECEQRLQELQTGLESSRQVHRSAAEQAQHAVKEAAISRQAAESAREHSEAAVSVWEDCLQASAFASASEVEGAALAPEERAEAAARVRAHRDGEAEALLQLRNIEEKLEGAVLSAEDWQESQETLRKCKEDDETALQGRARAERDLEDLQHRHIRWMELEGKRSEHAALQDRLSKLQTVLRGNAFVEYIAEEQLMQVCQAASQRLRFLSKQRYALEVDSGGGFVIRDDGNGGVRRPVSTLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLDPDLLDTVITSLERLHNDQLSVGIISHVPELRARLPRKLVVIPAEQGGGGSRIILEKM
>NZ_CP009287.1|WP_025705192.1|5481799_5482516_+|acetolactate-decarboxylase
MKNHVIYQASTMIALLSGQYDGSVSFGKLKEYGDFGIGTFHQLDGEMIAFDGGFYHLYPDGSARQVSMEESTPFSTVTFFEPDQTLRVHTPLTRSELEQVINTLLPSQNIFYAVRIDGHFREVHTRTVPHQDKPYKPFVEVTENQPSFRFSDEDGVIAGFWMPAFVQGIGVSGYHLHYINDARSGGGHVLDFIVEHCTISICSSEDFRLKLPHNDGYLKADLSTASLNEDIAAAEGSC
>NZ_CP009287.1|WP_025705193.1|5480080_5481769_+|acetolactate-synthase-AlsS
MSTRIEDAAVKTIPKGADVVVDSLISQGVSYVFGIPGAKIDSVFDVLQDRGPKLIVCRHEQNAAFMAAAVGRLTGNPGVCLVTSGPGASNLVTGLATANAESDPVVALAGAVPRSERLKHTHQSMDATSLFEPVTKFSAEVEHPDNIAEVMANAFRDASGSPPGAAFISLPMDVLTGAAKKYDLHGFSTPQLGAAPSHLIERTAAAICKARLPVILLGMKASSAAVTHAIRNMIRENDLPVVETFQAAGAISRGLENHFMGRVGLFSNQPGDLLLQEADLVLTIGYDPVEYDPRLWNGKGSRQICHLDDRRAEIDNDYQPQIELIGNIALNVEALSLSLQGIRLPEESMATLRQLRNKLEQDGNTFHSSSPHLVHPLNFIRTLRQLISDQVTVTCDVGSHYIWMARYFRSYEPRRLLFSNGMQTLGVALPWAIAASLVRPNEKVISISGDGGFLFSSMELETAVRLHLPVIHVVWRDGSYDMVAFQQRMKYGRTSGVQFGDVDIVKYAESFGAVGLRVNRPEELKEVLQNALEQPGPVVIDIPIDYSDNIKLGEKLLPHSMN
>NZ_CP009287.1|WP_042267300.1|5479348_5479708_-|histidine-triad-nucleotide-binding-protein
METVFSKIIEGSIPSKKVFENERILAFYDIEPAAPVHVLIIPKKFIASMNDVAPEDLPLIGEIHAVAQQIAVELGIADSGYRLINNCGPDSGQAVPHLHYHLLGGAKLGALVGNSTSHA
>NZ_CP009287.1|WP_036705646.1|5500249_5502496_-|Ig-like-domain-containing-protein
MTVYRKMTKMILIMILLTFAVFPVNVFAATGDLNSIEFDSSAKVELTVGQTPKQLKVYASLEGSSSKRDITAAAIWTSSNTNVVKVANGLLTAVSTGTAMITATYNNAIATLEVSVTHPFKELTLERSSDGNYKLGDSEETLRVKAKAVGGESATSVKDVSADADWTSSNPNVLTIEDGKITLVGEGKSTVTAKYKGLTATFKAVVQLPYSAIVLKDKAKDTAVKEMELLVGDSPVQLSAVTKATESSPEKDIAADAQWTTSNESIAKVEAGKITIVGTGKAVITASYLGVSKSVDIYVRTPYEALLLNPEGDQTLFLGESLKVKSFVRDAVNSSQNQSARTVWSSDNQLAATVTADSVASEDAAATVTAKAVGTTVIKGEYLGVSKSFKLTVLPSLTELTADKTEQELFTADSESLPKVSGTKYDGTKLEISDQIEWTSADEGIAQIKDGKLVGGKAGTVTVTGKIKNSTAAASPSAIRSKSVELKVTVLNKVLVLIGPEDPQSLVIGEEAPLPGVKAVLENGDELDVTQTIKWEFSGSNAVIKQTAAGKTMKGLAKGSATLKGTYSNKTISIPVTIEQKVVKLLVEPSVLEMNVKASKSIKVTGTFSNGKTANFSGAMNWESSNSAVAAVKGTSVKAVGEGTATLTGSYQGITATVKITVVPKLTKLTVSETRLKLAPGASQGVVVTALYDTGKTATVTGSTVWTSSRPSVAKVSASGIITAVGKGTTSIKGKYNNKTVTVSVTVK
>NZ_CP009287.1|WP_025706653.1|5502625_5503063_-|NUDIX-domain-containing-protein
MAYKQISAGGVVYRKGADGLEVQLIVDRYGKISLPKGKMEQGETVEETALREIREETGTIGVIKAPIDVIKYTFQHPVHGLVNKEVHYFLVESVGGETKAQTEEINAVEWHDPAAAWIRGTAHSYSNNIQVLRKALSLLGVKPSS
>NZ_CP009287.1|WP_025706654.1|5503296_5504640_-|tRNA-(N(6)-L-threonylcarbamoyladenosine(37)-C(2))--methylthiotransferase-MtaB
MPSVAFYTLGCKVNFYDTEAIWQLFKNEGYEQVDFEGPADVYLINTCTVTNTGDKKSRQMIRRAVRRNPEAIVAVTGCYAQTSPGEILDIPGVDLVIGNQDREHIMTHVKNIRESRQPVNAVRNIMKTREFEELDVPGFADRTRAFMKIQDGCNNFCTFCIIPWSRGLSRSRDPKSIVAQAHQLVEAGYKEFVLTGIHTGGYGDDLENYRLADLLWELDQVDGLERVRISSIEASQIDGKLLEVLNRSSKMCRHLHIPLQAGHNEVLKAMRRKYTTEEYYAKMELIRQAMPDVGITTDVIVGFPGETEEMFRAGYDFMKAVNYSEMHVFPYSKRTGTPAARMLNQVDEDIKNARVQQLIDLSEEMQLAYARKFVGKTVSVIAERSAKNAPGRSTQHGFSDNYLQVFFGGDDSLQGELCQVKITEAGVNECRGELVSVSRSGLRRIVQ
>NZ_CP009287.1|WP_042268307.1|5504643_5505408_-|16S-rRNA-(uracil(1498)-N(3))-methyltransferase
MQRYFVTPEQFQPDTVVISGEDARHIAKVMRGKAGDKLIVSDGVSREALVEIAGIEMGEVTVSILELLDMTHEPRIKITVAQSLPKGDKLETVIQKCTEIGAVGFIPFLSERTIVQYDERKESKRLERWRKICKEAAEQAHRNIVPEVHSPLSWKLLLKSFGEYDAVYFCYEKEEGLQLRSAAAPWLSALPPQSPGKVMVVVGPEGGFSPEECRAAEEAGAVSVGLGPRILRCETAGMVAAACILYESGEMGGA
>NZ_CP009287.1|WP_025706800.1|5505555_5506248_-|site-2-protease-family-protein
MDSLDRILVYPLQQLPFFLITIVIAFTVHEFAHAYFANKFGDPTARLLGRMTLNPAVHFDLFGIILLLLAGFGWARPVPVNRDNFRRPRLMGVIVSAAGPLSNFLLGIIGALIYAALYATGVMDSIANEQLLRAVYWFFGMFIPFNFFLFLFNLIPLPPLDGYRIIEDIAPRPIRGKLQQYEQWTVFIFLLIIFIPGLSAYTIGPLNDWSLQIANNFINMFLSLFGYGKL
>NZ_CP009287.1|WP_025706801.1|5506250_5507312_-|50S-ribosomal-protein-L11-methyltransferase
MLWHELTVHTTEEAQEMISNLLYEAGAGGVSIEESGTLNKTRDTRYGELYDEPLNDIPEGEAVIKGYYAETVSMDDIIEELAPRVAELRGFGIDPGQALISWKTVDEDDWAHAWKQYFKPLRVSDRLTIKPTWEEYTPADSAEKIIELDPGMAFGTGTHPTTALCLRALEQHIQGGEEVIDVGTGSGILAVGAILLGAKSVLALDLDPVAVNSARENVALNRLQDRIAVKESDLLSLLGGGERALDTAAGEMWPSARPSHPLEPGAVSAGPGSESGYGVTLPVKIVVANILAEIIVLFTDDVYRALQPGGIYITSGIYKDKEELVAKALVSSGFEIMEVSREEDWVAFTAGKR
>NZ_CP009287.1|WP_174469033.1|5507397_5508027_-|DNA-3-methyladenine-glycosylase-I
MINLILRHIAEKGENLILQITRCGWVNEDPLYIAYHDEEWGKPLYDDRKLFELMMLEGMQAGLSWYTVLKKREHFREVFDGFDPEKIVLYDEAKIEALMQDTGIIRNRLKIQAVIQNAAVFQEISREAGGFAKVLWSFTGGKPVINKWAARSEVPATSPQSDQMSKALKKKGMKFVGSTICYAFMQASGMVDDHTTDCFCHSSKRGSDI
>NZ_CP009287.1|WP_025706803.1|5508177_5509842_-|DUF4179-domain-containing-protein
MNKLEHALKHQLNEDQAVKYPDFEEMWTRIEQAERNSSGLRGSSAPAGSRRTRNWSKIAAAASLSVLVAAVPVYAAVHYNWGNLLSSNEGIQTALDQNLGQQLGQSITRDGVTLTLRTAIVDENRTVILYSLDVGAHTDTDFWSVKGMTLQGAKERSKEGEYNYEQWDEENKRYNGYFESDWVPGQDTEQITLAADAVKAVSVQDLEIPLDVESMKSQSFPIGREGMHKIEIQPFAQSKDKLLLSSAVTFDDPRNKEGIFPQLVAYNGTTRVADLSGGTFGEPGDHGEYKMKQYFKTGDITAGQTTFKLEYTKQERNIAGPWSFELKLSKKQMESGTHIQALQLPLETGDTDNTIEKLSVTPTQVRLSIRTEGKSFRRQLPYEKYSLEVSGKTLEGRYFGYSKEDSGLLNLRFERPAGLVIDESTPITFVGKYKVTIHTEDKTPTLLTNISTEKQTLIRDVGGYPVKWTYYMQGKDLYIETGSDDPHFGGINQTHLGENYKNLPGKPVTSNFSGDGNNKAIDVYKDFSDTEASIYMYFYTTDDPGKETRVQLQP
>NZ_CP009287.1|WP_081758886.1|5509801_5510089_-|hypothetical-protein
MHRQIRQERRAYKLESNRELLPVKIRAVLTLRYLHDFSLNEVSEALSIPLGTTKSRLHKGLKLMKKVLLETGIPEQEWKGEHYEQAGACTQASIK
>NZ_CP009287.1|WP_025706805.1|5510208_5511120_-|PAS-domain-containing-protein
MDNGLAQEVTDALVVKALEKNIALIRFTLDRRVAYVNEVFASTMKYRSEDMYGMQHRDFCFPAFVNSPDYEIFWQDLLTGKSFQDKIERMDSEGGSVWLEATYMPIYDEADKQIIGVTKVATNITNRQTNMSNLVERMQEMADSLSQRAEQGIERSRELLLSIDKIAGVSSENILTLSNLQTKAGDIQGVVQTIRDIASQTHLLALNAAIEAAHAGEFGRGFDVVAKEVRKLSAMVQDSIAEVRESVKGITEEIGRMSTGMDQVQDTVEEGQRQIEVALQEFTGISTSAQELDNQAREVLSII

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_27

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_27

5555894-5555967

Orphan

Consensus_repeat	Method
AAGTGGAAAAAGGGTAACTAATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_27

>merge|NZ_CP009287|27|5555894-5555967|CRISPRCasFinder
AAGTGGAAAAAGGGTAACTAATTTGCCCGATTCCCCTGTTCTCCGCAAGTGAAGTGGAAAAAGGGTATCTAATT

>NZ_CP009287|27|22|5555894-5555967|CRISPRCasFinder
AAGTGGAAAAAGGGTAACTAATT	TGCCCGATTCCCCTGTTCTCCGCAAGTG
AAGTGGAAAAAGGGTATCTAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_081954766.1\|5559822_5561625_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP009287.1\|WP_025707661.1\|5553677_5554631_+\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP009287.1\|WP_025704111.1\|5547175_5548186_-\|GPR-endopeptidase	unknown	unknown	gnl\|CDD\|235078
NZ_CP009287.1\|WP_025707659.1\|5551879_5552428_-\|sigma-70-family-RNA-polymerase-sigma-factor	unknown	unknown	gnl\|CDD\|182012
NZ_CP009287.1\|WP_025707658.1\|5550641_5551883_-\|zf-HC2-domain-containing-protein	unknown	unknown	gnl\|CDD\|379219
NZ_CP009287.1\|WP_025703962.1\|5565552_5566071_-\|dCMP-deaminase-family-protein	unknown	unknown	gnl\|CDD\|238613
NZ_CP009287.1\|WP_042267319.1\|5568024_5570472_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP009287.1\|WP_042267312.1\|5548652_5549114_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703963.1\|5566242_5566932_-\|ComEA-family-DNA-binding-protein	unknown	unknown	gnl\|CDD\|224472
NZ_CP009287.1\|WP_025707662.1\|5554742_5555768_-\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP009287.1\|WP_025704112.1\|5548365_5548638_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP009287.1\|WP_025707660.1\|5552688_5553330_-\|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase	unknown	unknown	gnl\|CDD\|180618
NZ_CP009287.1\|WP_025703960.1\|5561779_5562097_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042267316.1\|5558129_5559866_+\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224055
NZ_CP009287.1\|WP_081758605.1\|5562266_5565005_-\|ComEC/Rec2-family-competence-protein	unknown	unknown	gnl\|CDD\|377126
NZ_CP009287.1\|WP_025707663.1\|5556335_5556767_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707664.1\|5557112_5558102_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP009287.1\|WP_025703964.1\|5567074_5567923_+\|late-competence-protein-ComER	unknown	unknown	gnl\|CDD\|181080
NZ_CP009287.1\|WP_025704110.1\|5545510_5546857_-\|stage-II-sporulation-protein-P	unknown	unknown	gnl\|CDD\|377838
NZ_CP009287.1\|WP_042267314.1\|5549353_5550373_-\|DNA-polymerase-III-subunit-delta	unknown	unknown	gnl\|CDD\|235511

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_081954766.1\|5559822_5561625_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	5.84457e-163
NZ_CP009287.1\|WP_025707661.1\|5553677_5554631_+\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	2.45299e-104
NZ_CP009287.1\|WP_025704111.1\|5547175_5548186_-\|GPR-endopeptidase	gnl\|CDD\|235078	PRK02858, PRK02858, germination protease; Provisional.	4.41478e-180
NZ_CP009287.1\|WP_025707659.1\|5551879_5552428_-\|sigma-70-family-RNA-polymerase-sigma-factor	gnl\|CDD\|182012	PRK09641, PRK09641, RNA polymerase sigma factor SigW; Provisional.	6.79667e-46
NZ_CP009287.1\|WP_025707658.1\|5550641_5551883_-\|zf-HC2-domain-containing-protein	gnl\|CDD\|379219	pfam13490, zf-HC2, Putative zinc-finger. This is a putative zinc-finger found in some anti-sigma factor proteins.	7.27159e-10
NZ_CP009287.1\|WP_025703962.1\|5565552_5566071_-\|dCMP-deaminase-family-protein	gnl\|CDD\|238613	cd01286, deoxycytidylate_deaminase, Deoxycytidylate deaminase domain. Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP, providing the nucleotide substrate for thymidylate synthase. The enzyme binds Zn++, which is required for catalytic activity. The activity of the enzyme is allosterically regulated by the ratio of dCTP to dTTP not only in eukaryotic cells but also in T-even phage-infected Escherichia coli, with dCTP acting as an activator and dTTP as an inhibitor.	4.18654e-45
NZ_CP009287.1\|WP_042267319.1\|5568024_5570472_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP009287.1\|WP_025707664.1\|5557112_5558102_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	1.56279e-56
NZ_CP009287.1\|WP_025703963.1\|5566242_5566932_-\|ComEA-family-DNA-binding-protein	gnl\|CDD\|224472	COG1555, ComEA, DNA uptake protein and related DNA-binding proteins [DNA replication, recombination, and repair].	1.2118e-22
NZ_CP009287.1\|WP_025707662.1\|5554742_5555768_-\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	7.9945e-98
NZ_CP009287.1\|WP_025704112.1\|5548365_5548638_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	1.05874e-22
NZ_CP009287.1\|WP_025707660.1\|5552688_5553330_-\|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase	gnl\|CDD\|180618	PRK06552, PRK06552, keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional.	2.82795e-106
NZ_CP009287.1\|WP_042267316.1\|5558129_5559866_+\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224055	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms].	1.09968e-158
NZ_CP009287.1\|WP_081758605.1\|5562266_5565005_-\|ComEC/Rec2-family-competence-protein	gnl\|CDD\|377126	pfam03772, Competence, Competence protein. Members of this family are integral membrane proteins with 6 predicted transmembrane helices. Some members of this family have been shown to be essential for bacterial competence in uptake of extracellular DNA. These proteins may transport DNA across the cell membrane. These proteins contain a highly conserved motif in the amino terminal transmembrane region that has two histidines that may form a metal binding site.	3.83032e-66
NZ_CP009287.1\|WP_025703964.1\|5567074_5567923_+\|late-competence-protein-ComER	gnl\|CDD\|181080	PRK07680, PRK07680, late competence protein ComER; Validated.	5.69707e-128
NZ_CP009287.1\|WP_025704110.1\|5545510_5546857_-\|stage-II-sporulation-protein-P	gnl\|CDD\|377838	pfam07454, SpoIIP, Stage II sporulation protein P (SpoIIP). This family contains the bacterial stage II sporulation protein P (SpoIIP) (approximately 350 residues long). It has been shown that a block in polar cytokinesis in Bacillus subtilis is mediated partly by transcription of spoIID, spoIIM and spoIIP. This inhibition of polar division is involved in the locking in of asymmetry after the formation of a polar septum during sporulation. Engulfment in Bacillus subtilis is mediated by two complementary systems: the first includes the proteins SpoIID, SpoIIM and SpoIIP (DMP) which carry out the engulfment, and the second includes the SpoIIQ-SpoIIIAGH (Q-AH) zipper, that recruits other proteins to the septum in a second-phase of the engulfment. The course of events follows as the incorporation firstly of SpoIIB into the septum during division to serve directly or indirectly as a landmark for localising SpoIIM and then SpoIIP and SpoIID to the septum. SpoIIP and SpoIID interact together to form part of the DMP complex. SpoIIP itself has been identified as an autolysin with peptidoglycan hydrolase activity.	7.95182e-92
NZ_CP009287.1\|WP_042267314.1\|5549353_5550373_-\|DNA-polymerase-III-subunit-delta	gnl\|CDD\|235511	PRK05574, holA, DNA polymerase III subunit delta; Reviewed.	6.71003e-76

>NZ_CP009287.1|WP_025707662.1|5554742_5555768_-|LacI-family-DNA-binding-transcriptional-regulator
MKKLTIEDVAQKAGVSKSTVSQFLNKRFKYMSEATKNRIAEVIEELNYQPNGLARSLKQNRTHMVGIIVANIDYSLSIQCIRAIENELQRHGIQVIICNSDENADKENTHVEALVARQVDGLIIFPAGGKPSPYARLIEAEYPLVFMDRLVEGITTQSLLLDNEMAVKTAIKELTGKGHEAIAFLSLPLGEHAITPRKERMSGYKKAIEEAGLAMNDLYVCSVPREAIASALDGLLNLPQPPTALLAANDLVLGEILKYANRHSITIPGQLSVIGIDDAEFARIYNPAITTIRQPAYEMGMQAAKIMLSLIEDKESAVPITYRFPPALQQGQSVQAPPGTK
>NZ_CP009287.1|WP_025707661.1|5553677_5554631_+|sugar-kinase
MSKQLDAVTFGEPMAMFYANEAGPLHEVTSFSKALAGAESNVATGLSRLEHKTGYVTKLGEDNFGQFIAGALNKEQINTDSITYTKEFPTGMLIKSKVLTGDPKVEYFRKNSAASTLSLADFDESYFASAGHLHVTSISAALSKTCHEFSLHAMEFMKKSGKTVSLDPNLRPVLWPDTETMVNTINDLATRCDWFLPGHSEGKILTGLDTPEEIAGYYLERGVSLVVIKLGPEGAYYKSSSGEEGYVGGFKVKSVVDTVGAGDGFAVGVISAMLEKLTVAEAVKRGNAIGALAVMSPGDMDGLPTREGLEKFMKASL
>NZ_CP009287.1|WP_025707660.1|5552688_5553330_-|bifunctional-2-keto-4-hydroxyglutarate-aldolase/2-keto-3-deoxy-6-phosphogluconate-aldolase
MKKIKVLQNITAVGVVAVIRADNADDAVKMSAACIEGGLNNIEVTFTTPDADVAIKRLVAEYGSRAVIGAGTVLDPLTARIAILAGSEFVVSPSFEEETAKMCNLYGIPYMPGCMTLNEMKEALKLGVDVLKLFPGSAFGPDYVKAVKGPMPHVNIMPTGGVDLNNMEKWIANGCIAVGIGGNLTAPAKEGRYDQITELAAKYVAKFKEIKGA
>NZ_CP009287.1|WP_025707659.1|5551879_5552428_-|sigma-70-family-RNA-polymerase-sigma-factor
MVEQGLIRAAQAGDRDALITLLREIEGHVYKTAFYILHNEQDALDASQEALIRVYTKIGSYEEKAQFKTWVQRIVTNICIDKFRRTKPTVSIDEHEMVFPDKHDVEREVLSGYLAEDIREAIDQLPEHHRTVIVLRYLQDFSYNEIADSLDLPLNTVKSYLFRARQQLQNRLQEYQKGGVSG
>NZ_CP009287.1|WP_025707658.1|5550641_5551883_-|zf-HC2-domain-containing-protein
MKCAEVMEWMHRYLDHDLSQEEMIEMFRHIDNCPSCADVYDRLSTLSRQLEQLPDVKPPFSLVDSIMPRLDELDRGVQEPVMTSTDESNVVPLSRKSSHGKPPKGSSMAARTGIGAVAAAIILLIAIFNMPESMPAADVDQALNQSADTGSSLQKSIVSTEPSQEAGQEGRADSADGAAGTTGQDNTGQDNMFSASGNNPSGGAEERVAPSKAPVQDAPAVAPSTTKKPDTMKRQTEKPDKAAATPAARENANNSSPDTSGDTSAQDSAPKKGKMEAGETNSSNDIQPSPSELGIMNMMPAMVAASPSTSPDGRFDAELAGQQLVIYSIPAGASRDDRTALTSLPLEGEWVSGGWSEDSREFTYVTTQNGSEITKTYTVPDSAAPEVPSASQTVSPAATTAPAPTPDPAASTK
>NZ_CP009287.1|WP_042267314.1|5549353_5550373_-|DNA-polymerase-III-subunit-delta
MDAKAAAKDIRQGKISPLYVLYGSEKFRMNEFAAFLEEHLIAKEDRDFAVIPFDLSETPVQAVVEEAETVPFMVERKLLLVRDASLFTAGKDSAKIEHRVEVLSDYMQHPAEFSVIVFMVNNDKLDERKKIVKTVKSAGAVLAFNPLGAEELLRWVEKGVRDRGCEAAPGAAAVLVANAGTGLQGLSAEMDKLCLFAGKGGIVDAVAIESLVHRGTEQNVFTLVEDIANLRLDKALNTLYELLKQREEPIKIASLIARQFRIILQVKDLSAQSYSQGQIASGLGLHPYAVKLAGEQAHKFESQRLRQILSFLADLDYQMKTGAIDKVLGLEMFMLRLGA
>NZ_CP009287.1|WP_042267312.1|5548652_5549114_-|hypothetical-protein
MSCPKDACGETTAEMPLLKVHQAVCSETTAEMPLLKVHQAVCSETTAEMPLLEAHQAVCSETTAEMPLLEDPQAVCGETTAEMPLLEAHRAVCGETTAEMPLLKDPQAVCSETTAEMPLLKVHRAVWLRRGKQCAQKNLTVCSIPVRFLKCSL
>NZ_CP009287.1|WP_025704112.1|5548365_5548638_+|30S-ribosomal-protein-S20
MPNIKSAVKRVKTTEKRRALNASQKSALRTAVKTADVALTGTEVETAQAAFQAASKKLDKAVTKGLVHKNAAARKKSRLAKKLNALKAEA
>NZ_CP009287.1|WP_025704111.1|5547175_5548186_-|GPR-endopeptidase
MELDLQLYSVRTDLALEAKEMAQGPQKTPIPGVNEEVEEADGIKVTRLAVANNAGSQAIGRAIGNYVTLEVPALRGGDTGLQQKVSVVFAREFEHFMDRIGIDRNSSVLIVGLGNWNVTPDSLGPLVVENSLITRQFYELVPDQVSPGYRNVSAIAPGVLGLTGIESSEVVQGIIDRTKPDVIIAIDALASRSLERINTTIQIADIGIHPGSGIGNKRRGLTKEILGIPCIAIGVPTVCYASTIVNNVLEMMSRHFGQAGAGATQTKEIMGMLDDISEHERLSLVKEVLEPLGHDLIVTPKEIDEFIEEIANIVASGLNAALHEAVDPGNVGAYTH
>NZ_CP009287.1|WP_025704110.1|5545510_5546857_-|stage-II-sporulation-protein-P
MNKKWFQLWNIGRLRSKLLDVLSLGRTMLLLAGGSLVFFMLLGAGGLAGQKLNSSPIPSMKGLAASLSSGFFMELLGMEVPHLPKSDEPSAFSGPNVTSFVFRMLTSVDPGDPKSLLSREVPGLAADDPFLLRLGSGGAKDAPADYHPGTDELAGGNPEANVTGDGTGGESGTSGTEPAHGDGVDEPGGGENEMQPEPTAAPDAAGSNGSSTPGSSREDSVKRILIYHSHPREAYNPLLGVESDNPSSAVPSKNVMLVGSYIAKRLEQRGIGTVHAQQDYATTVPDYNWNFSYKYSRMTVKAAMSANQEMTEMIDIHRDSQRHGKTTAVINGKSYAQVYFILGHANKNWKKNEAFANKIHQLLEKSYPGVSRGIWGKSSGNGNNGEYNQTLSPNSVLIEVGGIDNSEDELKRTADILADAIADVYWNSHDAEKAAAPDSGVDTVKQSN
>NZ_CP009287.1|WP_025707663.1|5556335_5556767_-|hypothetical-protein
MQSKDLPYAVAYAPTMTLREMMETYGSDVWHYAFFLTRSREVLLVNYTEDGKGGYTKHSKLLDIATGKSQVLTGTITTEKKKRPAKSHYGAITTDTKEDYFVAHYEVKGERRSVEINMPTGKQWYYDWWNQEYGEKINPSATP
>NZ_CP009287.1|WP_025707664.1|5557112_5558102_+|LacI-family-DNA-binding-transcriptional-regulator
MKTKKVTITHIAKAMGLSPVSISRALANQAGISDELKAKIVEKAAEMGYIKPRKHTPARILVLHRKPYQHDNSNFSYMVQGIEKALQQADTDYSIEFLDKENQSRLILPYRLSKGFKFDGVIFIGRFNPEYVSFIQQEIPNLIFYVGYSPAYDYDSVWFSFLNAGYKQCKYLIDRGHTRIGFLGDISAYRNKEKKTGITSALEEHGLSVEESLFFGRNEAFPARLAGLISERLLPTAFICEHDFTAVELIRLLQKHGLKVPGDVSILSSGNTEVSAYSLPALTTMDLNIEYSCRTVVSTLLKRIAEPGKPAENIAILSTLVERESVRTL
>NZ_CP009287.1|WP_042267316.1|5558129_5559866_+|ABC-transporter-ATP-binding-protein
MDYSVLLRFFKARKFSYMTGFAFMFAASFIQTLFPKVLGSAVDLMKDSGFAIRQVMFLVLWMTLIAAAVFACTFLWRNIIIANARNLECYIREELVRHFLKLPPSFYNTRKTGDLIAYAINDISAVRMTFGPATAMSFNGIVICFSSIYFMFATVDARLTLITLSPLPFIILLMLFTGRKVQTRFRTVQNQFGAVSDRVQENISGIRVIKAYVQERSEMERFSALSSRMKQANLDLIRVSAALPAMIEFGFAICFVLGLVLGSRMVLRGQISVGDFVAFNGYLSLIVNPIVSIGRIVTIFQRGMASLGRLHDILRIQPEIHDLPQAVDIQPDGPVELRHLTFHYDEAGAPALQDLSLMLPKGHTLGIIGHTGSGKSTLASLLFRFFNVEPGRILLNGRDINGYTLETLRGGLGYVPQDTFIFAASVRENIVFFKDGYSDEEVREAATLSMIADSIGSLPEGYDTILGERGVNLSGGQKQRLAIARALIRNPAILILDDALSAVDAVTEGLILERLRLTRQGKTNILISHRVSAVMQADEIIVLDKGRIVERGTHGQLLKEGGLYNAIYTEQHEDGQTA
>NZ_CP009287.1|WP_081954766.1|5559822_5561625_+|ABC-transporter-ATP-binding-protein
MLSTPNSMKTARQRSRKKPEAGAVKLLLRLSAPYTFQLILACLCVVIVNGALLIQPLLLQRVIDYFLIGGAVERGLNSIGGLALLYLLVSAASAIFSYLQALIVSKAGQSLTHELRVRVFSIIERLPLTYLDRTSSGRLITRATNDTSEISDLYTDVVISLVKDVLLLAGIVYAMLILSPGLTLVSFTVIPVIVFLVFFIKNKIKKNFFHMKHYIGQINGFIAESISGMRVIQIFRAEQEKEQQFLKLNREYFSTTLIQVRLNSILKPASDMFQSLAIAILVWYSVGRIAGGTLQIGVLYAFTTYIRQFFAPVSDLADKYTSIQSALVSTERIFELIREEERLEEPDAGLPMQRLDGRIEFRHVWFSYNGAGWVLKDVSFVIEKGQTAAFIGETGAGKTTIISLINGFYKVQKGEILIDGVNVNDIRLDDLRRNISVVLQDVFLFSGTIRDNITLGDDIDDDTVQDALRASCAEAFVQGAPEGIGEPVTERGSTLSAGQRQLISFARAIAHDPAIFVLDEATANIDTHTEKLIQQAIDNAASGRTTLIIAHRLSTITGADLIIAMKAGRIAESGHPRELLERGGYYAKLLQESRDHVYSS
>NZ_CP009287.1|WP_025703960.1|5561779_5562097_+|hypothetical-protein
MEQPPQEVFGNWQHAFEEDAHGIAVYRPAGNSFASSEGCEKLEIRQDGTFSRVVPGPSEAPDIIKGEWEQTKDKLIHVSYESPGLAPQQLEIIESKPDILKVRKL
>NZ_CP009287.1|WP_081758605.1|5562266_5565005_-|ComEC/Rec2-family-competence-protein
MFSGYKLLIYTAGCLLLLAICAVRGRSGWKISVVLGLSLFAATLYWEWNEGRNASLLPLVLGQSMAELNETYVTVEGQIVSPVERDGDRVDFTVKLSRMGLGGTGADSAMSATGAEENKRGSAGKLKDTRKTGEGQQQDAGTQADDPGQQMELGQEEVAGELIAVQITLQVESEIAVAGGWKRGDRVAVQGELKQPGEARNFGGFDYRAYLRTQRIHWLLKGEGTASVQAVPPDSWGPSSLLRWNDGVRTALGAEMDRLFHEPHAGYMKGLVLGIPDDLDEETFKQFSQLGLTHILAISGMHVAVVVGVILFLLQRLRLTRETALTVTILLVPVYVLLSGAGPSIVRAGIMSMIALLAARFGMLKDGMNILAAAALMMLVWNPYLLLSVSFQLSFLVTAGLMVYVPLVNPLLCRLPRWLGGAVSVTLIAQLVSFPLTIYYFNQFSLLSFAANLVLVPFITFLVLPLGTLALLLGRLWEAAAGVIAHAAELMNDATFRAVEWTNGFSGGVLIWGSPSLLWMGMYYGLLYGILYAMKRRAEARLAPQVMEDETKPLTEPDQPQDGRGKRVWAAGIWGGAGESLQPNPFQMPESMGWSGLSALLCAVGLALLLYRGYHSEQLGGAGAISYLDVGQGDSILITTPGGAHLLVDGGGTVSFGKKEEWRARRSPFEVGAKTLLPLLKQRGIHRLDAIILTHGDQDHAGGLQAVLEGMPVSALLFNGTLAKGDTYSKLMNTALAAGVRLYPVQQGQALTPDDKTELMFLWPDPHKAGEAELPAVEDQNHKSVAFRLEMNGRSFLFTGDMDKAAEEAILLEGMQAGISSSAPIDVLKVAHHGSKTATGADWLEFWSPGAAVISAGVNNLYGHPNGDVLKRLADSSTAVYRTDLQGEIQMEVRRERIAVRHKLEPGNRAVE
>NZ_CP009287.1|WP_025703962.1|5565552_5566071_-|dCMP-deaminase-family-protein
MTVAYRKNWDTYFMDIACMVSTRSRCPRRHVGAVLVQGKKLLGTAYNGAPMGVPDCSEAGCMVSEQYEREVVNGVETMVKKQRCIRTIHAEQNLLLFTDRSDREGSTVYVTDEPCWTCANMLANSGIVEIVYLRPYRKDMEKVEAMLASKGIVFRQLENYEPPKETMITVSE
>NZ_CP009287.1|WP_025703963.1|5566242_5566932_-|ComEA-family-DNA-binding-protein
MNVRRIASVLAAALLGGGLIWAADREENNGIAGWESLNVSMAQALGVADKPDTAVSAGGEGGKARNPKEAAVDKEAPNGAGEAGADLKRSSGAAEAGSAGGTVNGNAAGAAGGGEAVATAAGNAAPPTAGARDVTATVPGSTASSNLAPISTASANSAPASQASVKGRINVNTADAAALMNLPGIGGKKAQAIIDYRSSNGAFRSLSDLGEVKGIGPKMLEKLEPLVSF
>NZ_CP009287.1|WP_025703964.1|5567074_5567923_+|late-competence-protein-ComER
MKVGFIGTGSMGSLLIDAFLSSGALEPCDVLASNRSPNRLLQLQQHHPGISIGSNRETAQGSDIVFICVKPLEFKTLTDEIASSLRSEQIVVSITSPVMLYHLESTLPSKIAKVIPSITHRVKSGTSLCIFGSRLNKKDRLLLQRLLSFIGVPLEIQEKHTRIASDFSSCGPAFISYFIERWIEAAVEATGIDQELITRLAGEMLLGTGKLLTQGELTPQELQERVAVRGGITAEALGHLRTSLEGVFERLILTTHDKYDEDVEKLNALFGCHDIVQAPLDR
>NZ_CP009287.1|WP_042267319.1|5568024_5570472_-|leucine--tRNA-ligase
MSDNNTTSTASGYRAQTIEPKWQKFWDENKTFKTGEDAGKPKFYALDMFPYPSGAGLHVGHPEGYTATDIVSRYKRMRGYNVLHPMGWDAFGLPAEQYAMDTGQHPREITFKNIDNFRRQIKSLGFSYDWDREISTTDPEYYKWTQWIFIQLYNRGLAYVAEVSVNWCEALGTVLANEEVIDGKSERGGHPVVRRPMRQWILKITEYAERLLEDLEELDWEESIKDMQRNWIGKSTGAEVIFAIEGHDASLEVFTTRPDTLFGASYCVLAPEHKLVDLITTEEQKAAVAEYRDKASRKSDLERTDLAKEKSGVFTGAYAVNPVNGAQVPVWIADYVLAGYGTGAIMAVPGHDSRDWEFAKQFGLNILEVVQGGNVEEEAYSGDGPHVNSDFLNGLDNKKAIAKMITWLEEKGSGKGKVTYRLRDWLFSRQRYWGEPIPILHLEDGTMKTVPVDQLPLLLPEVDSIRPSGTGESPLANVTEWVETIDPETGMKARRETNTMPQWAGSCWYYLRYIDPRNDKELCSPELQKEWLPVDLYIGGAEHAVLHLLYARFWHKVLYDIGVVDTKEPFHKLVNQGMILGNNNEKMSKSRGNVINPDEIVEAYGADTLRVYEMFMGPLEATKPWNEKGVEGIHRFLSRVWRLFVNEDGSISAKITPGGGTDEFKRTWHKTLKKVTEDFEQLRFNTAISQLMIFINDAYKQETLSTEAAEHFVQMLSPLAPHIAEELWQLLGHEGSISYVAWPVYDEAWTVDAEVEIVVQVNGKIVQRALIPQDMGQEDMQNHALSLPNVKSAVEGKTVRKIIAVPGKLVNIVVG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_28

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_28

5875763-5875860

Orphan

Consensus_repeat	Method
GCTTCGGAAGCATACGCTTAGTTTTACGGAGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_28

>merge|NZ_CP009287|28|5875763-5875860|CRISPRCasFinder
GCTTCGGAAGCATACGCTTAGTTTTACGGAGCATTGCAACTTGAATTAACTTCGCAGTAAAAACTTGCTTCGGAAGCATCCGCTTAGTTTTACGGAGC

>NZ_CP009287|28|23|5875763-5875860|CRISPRCasFinder
GCTTCGGAAGCATACGCTTAGTTTTACGGAGC	ATTGCAACTTGAATTAACTTCGCAGTAAAAACTT
GCTTCGGAAGCATCCGCTTAGTTTTACGGAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703607.1\|5872234_5873329_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	unknown	unknown	gnl\|CDD\|340819
NZ_CP009287.1\|WP_025703309.1\|5881274_5883173_-\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|293739
NZ_CP009287.1\|WP_025703311.1\|5884056_5885394_-\|5'-deoxyadenosine-deaminase	unknown	unknown	gnl\|CDD\|180895
NZ_CP009287.1\|WP_042267392.1\|5877222_5878311_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|226988
NZ_CP009287.1\|WP_025703310.1\|5883497_5883818_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707790.1\|5868098_5868677_-\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP009287.1\|WP_042267390.1\|5870422_5871262_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187564
NZ_CP009287.1\|WP_025703304.1\|5876055_5877189_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|226988
NZ_CP009287.1\|WP_025707791.1\|5868711_5869428_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055
NZ_CP009287.1\|WP_025703312.1\|5885748_5886288_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009287.1\|WP_025703306.1\|5878532_5879315_+\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226425
NZ_CP009287.1\|WP_155990293.1\|5879356_5879524_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_167337236.1\|5873631_5873826_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707788.1\|5866317_5867355_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|340831
NZ_CP009287.1\|WP_052415732.1\|5874166_5875663_-\|glycosyltransferase-family-4-protein	unknown	unknown	gnl\|CDD\|379337
NZ_CP009287.1\|WP_036706122.1\|5869424_5870426_-\|NAD-dependent-epimerase/dehydratase-family-protein	unknown	unknown	gnl\|CDD\|366597
NZ_CP009287.1\|WP_025703606.1\|5871258_5872245_-\|polysaccharide-biosynthesis-protein	unknown	unknown	gnl\|CDD\|367154
NZ_CP009287.1\|WP_025703308.1\|5879819_5881265_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025703307.1\|5879644_5879830_-\|aspartyl-phosphate-phosphatase-Spo0E-family-protein	unknown	unknown	gnl\|CDD\|378175
NZ_CP009287.1\|WP_025707789.1\|5867351_5868074_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133055

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703607.1\|5872234_5873329_-\|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)	gnl\|CDD\|340819	cd03786, GTB_UDP-GlcNAc_2-Epimerase, UDP-N-acetylglucosamine 2-epimerase and similar proteins. Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family (EC 5.1.3.14) are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.	5.97352e-122
NZ_CP009287.1\|WP_025703309.1\|5881274_5883173_-\|LTA-synthase-family-protein	gnl\|CDD\|293739	cd16015, LTA_synthase, Lipoteichoic acid synthase like. Lipoteichoic acid (LTA) is an important cell wall polymer found in Gram-positive bacteria. It may contain long chains of ribitol or glycerol phosphate. LTA synthase catalyzes the reaction to extend the polymer by the repeated addition of glycerolphosphate (GroP) subunits to the end of the growing chain.	1.63229e-89
NZ_CP009287.1\|WP_025703311.1\|5884056_5885394_-\|5'-deoxyadenosine-deaminase	gnl\|CDD\|180895	PRK07228, PRK07228, 5'-deoxyadenosine deaminase.	0
NZ_CP009287.1\|WP_036706122.1\|5869424_5870426_-\|NAD-dependent-epimerase/dehydratase-family-protein	gnl\|CDD\|366597	pfam01370, Epimerase, NAD dependent epimerase/dehydratase family. This family of proteins utilize NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions.	6.18723e-40
NZ_CP009287.1\|WP_025707790.1\|5868098_5868677_-\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.15516e-09
NZ_CP009287.1\|WP_042267390.1\|5870422_5871262_-\|SDR-family-oxidoreductase	gnl\|CDD\|187564	cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs. dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif.	6.6203e-68
NZ_CP009287.1\|WP_025703304.1\|5876055_5877189_-\|glycosyltransferase	gnl\|CDD\|226988	COG4641, COG4641, Uncharacterized protein conserved in bacteria [Function unknown].	1.87204e-34
NZ_CP009287.1\|WP_025707791.1\|5868711_5869428_-\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	1.25016e-38
NZ_CP009287.1\|WP_025703306.1\|5878532_5879315_+\|AAA-family-ATPase	gnl\|CDD\|226425	COG3910, COG3910, Predicted ATPase [General function prediction only].	1.21101e-97
NZ_CP009287.1\|WP_025703312.1\|5885748_5886288_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	2.25043e-16
NZ_CP009287.1\|WP_025707788.1\|5866317_5867355_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	1.31502e-24
NZ_CP009287.1\|WP_052415732.1\|5874166_5875663_-\|glycosyltransferase-family-4-protein	gnl\|CDD\|379337	pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1.	1.15498e-28
NZ_CP009287.1\|WP_042267392.1\|5877222_5878311_-\|glycosyltransferase	gnl\|CDD\|226988	COG4641, COG4641, Uncharacterized protein conserved in bacteria [Function unknown].	2.37967e-28
NZ_CP009287.1\|WP_025703606.1\|5871258_5872245_-\|polysaccharide-biosynthesis-protein	gnl\|CDD\|367154	pfam02719, Polysacc_synt_2, Polysaccharide biosynthesis protein. This is a family of diverse bacterial polysaccharide biosynthesis proteins including the CapD protein, WalL protein, mannosyl-transferase, and several putative epimerases (e.g. WbiI).	3.64389e-122
NZ_CP009287.1\|WP_025703307.1\|5879644_5879830_-\|aspartyl-phosphate-phosphatase-Spo0E-family-protein	gnl\|CDD\|378175	pfam09388, SpoOE-like, Spo0E like sporulation regulatory protein. Spore formation is an extreme response to starvation and can also be a component of disease transmission. Sporulation is controlled by an expanded two-component system where starvation signals result in sensor kinase activation and phosphorylation of the master sporulation response regulator Spo0A. Phosphatases such as Spo0E dephosphorylate Spo0A thereby inhibiting sporulation. This is a family of Spo0E-like phosphatases. The structure of a Bacillus anthracis member of this family has revealed an anti-parallel alpha-helical structure.	6.16743e-07
NZ_CP009287.1\|WP_025707789.1\|5867351_5868074_-\|glycosyltransferase	gnl\|CDD\|133055	cd06433, GT_2_WfgS_like, WfgS and WfeV are involved in O-antigen biosynthesis. Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	3.54522e-31

>NZ_CP009287.1|WP_052415732.1|5874166_5875663_-|glycosyltransferase-family-4-protein
MADKATIVLFSHVSNTRSITGAEKLLLFFSRELSPYFNCILVAPQEGKLTRQARKNGLNVQLLTIPLVYGMYTPYAGLEPDIRKFQEKREYCELVEWLGALRPAFIISSTCVHALPAMAAKSLGIPVVWKISETITDNDFTSISTELIHKNSDEILAISHTAASCFPEDIREEKVTQLPPSWNDSEMMFEAWSKLRSERRRELRVAPKEPLIGYISSFINKEKGLEHFVKMAVLVSKHHPEAKFMVVGTPGDKSYYERCVRKVKLEGLTSHFKFLGYEESLPEVYCAMDMLVVPSLIREGFGMTALEGLAFGKPVVAYASGGLYEILHAAGCGELLAPVGDIDQLAQRVNSMLAVPGLAAVVGSLARERVDAVYGPAAYRVRLQGLAERWNLRYCPALPEPAGAPELPAAAEASDSSEPVPPPQPEPARQSPASRAARLRRGRLRRGKLRRATSRARSRPRPGRKRRAARSARRRSSGGKHRRTGHARRQAKRRRKAA
>NZ_CP009287.1|WP_167337236.1|5873631_5873826_+|hypothetical-protein
MAGALAADLTAFLPVLGAMTGALAANLTAFLLVLGAMTGAYAADLTAFLPVIPLRVVKSEVISP
>NZ_CP009287.1|WP_025703607.1|5872234_5873329_-|UDP-N-acetylglucosamine-2-epimerase-(non-hydrolyzing)
MKIMTILGTRPEIIRLSVIIPLLDEHAEQHVLVHTGQNFTASLSGIFFAELGLRAPDYVLQDKQAGLGGQLAAMFGSLESILLKERPDRILLLGDTNSALCAILAERMGIPVVHMEAGNRCYDLKVPEEKNRRVIDAVSTINMPYTQQSKRHLLSEGFPSQRIVLTGNPIHEVIKHYNRQIGASDILDRLNLLAGQYFLVTAHRAENVDDPGSLLQIMSGLNLVAEHFGLRLICSIHPRTRSKLAEQFKLEMNPLVEFHEPFGFFDFVHLEQYALCAITDSGTVQEECCLMGVPTVTIRRTTERPETVDCGSNVVSGVEQESILRCTRLMTSMSPEWEAPEGYMTPDVSVKVVKFLLGGNLHVQ
>NZ_CP009287.1|WP_025703606.1|5871258_5872245_-|polysaccharide-biosynthesis-protein
MFNNKRILVTGGTGSWGHELIRQLLPQNPKEIVIFSRSESAQVAMSREYEDSRLSFIIGDIRDKDALVAACRGIDYVFHLAALKHVPVCEDQPYEALKTNVVGTQNVIEAAIASNVEKAIYISTDKAANPSNFYGMTKAIGEKLFVYANLLGSQTRFVTVRGGNVLGTNGSVVHLFMKQIKDKGQVRITDMKMTRFFFTLRDAITLLFKASEVSLGGEIFVMTMPTCRIVDLAEVLIEASGRRDVSMIEAGIRPGEKIHEILMSDFESQTTVVYDEQYLVILPTLDMPELKAHYSRYPHVSFNSFSSENNLMDQEEIKDILIRGGFLE
>NZ_CP009287.1|WP_042267390.1|5870422_5871262_-|SDR-family-oxidoreductase
MKLLILGGNGMAGHMLADYFRRQGKHHVFHTTRDKSDLGGLYIDADDIAGVEKLVEIVSPHCIINALGVLNQFAERDRIGAYHVNGFLPHRLRRAADGVHARLIHISTDCVFEGTRGGYTEDDTPDGTSVYAITKSLGEVREPGHLTIRTSIIGPEIRSSGIGLMEWFLAQRGPVSGYRRVMWNGVTTLELAKAVDALLEPEISGLIHLAHPQPVSKYELLRHMQEAFNKEDVEIIPESAHIQDRTLVSTRADVQVQLPPYPVMLAELAAWMKQPAMST
>NZ_CP009287.1|WP_036706122.1|5869424_5870426_-|NAD-dependent-epimerase/dehydratase-family-protein
MRARRILITGASGFTGRHAVAYFHAAGAEVTAVIRSAAAASGIFPAGVKRQICDLSDRRAVNSMIEEVEPEEVLHLAGKNSVPESWQDPLLYMETNVMSTLYLLEGLRTRPARRILVAGSRLKFKPGLAGGPPHPYSLSKTLEELVSLAWCTLFKQPVLLAEPCNLIGPGPSTGFCSLLAQHIVRSEAAAGTSETLPPFRLSSRFALRDFLDVRDAVRAYDYILRSGEPGKIYRIDSGTQRGLGAVAGQLLAHAAAPVAMDWGPVDAGDEQEPAPSAAAVPAVLSSALVNQEELSASPEDNAARLGWSPLIELSRSLADIVDYYRASREGGAS
>NZ_CP009287.1|WP_025707791.1|5868711_5869428_-|glycosyltransferase
MKPRVSVVIPFYNCPYIEQALQSALNQSWQPHEIIVVDDGSTMHTDRITPYLPNIHYLGKANGGTASALNHGIRHASGDYIVWLSSDDMFYRDKINNQVLFMDQNRLLITYTNFNYINESTQLIELNAAAVFPSHLDYLRCFLQGNPINGCTVMFKRELFGAIGLFDESLPYTHDYDLWFRAILNGYPPVMLNQSLTAYRRHDGMGTLKHYDAIMAEAAATNARYNPMLRSLIASMGG
>NZ_CP009287.1|WP_025707790.1|5868098_5868677_-|class-I-SAM-dependent-methyltransferase
MYREIKVKDFLPVLLEQLKFAETILDVGSGTGTLLERYEASVVIGLDIHRPYLLHRKYTAPHIIPVHADAGHIDKLFLPGTFSAVTLIDSLEHFTMSEGKELLRKAEVIAAGRVVVFTPRGFFPQEGTDHYHLHGEYYQKHRSGWEPEDFLGLGYAVTVLKGYHHAENPSFREAFGPNHAPLDALLACKTLY
>NZ_CP009287.1|WP_025707789.1|5867351_5868074_-|glycosyltransferase
MNYGTRVSVIIPFYNCSYVHLAIESVLAQSYPDIEIIVVDDGSTLHTEKLAPYGGRIKVLRKTNGGTASALNLGISSASGAYFAWLSADDCFHPDKIGRQIAVMHATQTSFNHTAYYYINELGERFSGKISMPFHGKAELIETLMTGCPVNGSTVMLDMNVFKKVGLFNEKLLYTQDYDLWLRILAYYDWSYIEEPLLDYRVHQEMGSIIHSEAQKREIKQVQELHHKSLVRLLRKERGR
>NZ_CP009287.1|WP_025707788.1|5866317_5867355_-|glycosyltransferase-family-4-protein
MRITFPILTLTRGGAQRMLAELANRLADAGHEVTVLMPSHGIVEYPMQCPVIFAGDTRISEDDFPAGDVIVSNYFTTVPVSQRASEQGKGIHIRLALCYEPTFLPDNNLSFASYHLAPNLLVLSRWQQGIVRINHGIKGRIVPVGLSSDFYNMHIREANRKLIVSAIVRKPEGGFSGHREQEYLLQQLDRIKEQQPEVEICLITPPREYEESSWLQSLFEDGHYRLRTPLSDEELCYHYNESDIFVSSSTYDSGSLPGLEAMRCGAALVTVYSGGNLEYCVNGVNCLMSYRYENRLAEDVLTLIRNKEQRERLAINGAASSLRFTWEKSFNIFQEEMYDIVSKQG
>NZ_CP009287.1|WP_025703304.1|5876055_5877189_-|glycosyltransferase
MNNNFIMPAPPLPRTPAEEEKLRGRLSGFKIGYDEGYLRGRLTILDGRPEEPLPVRNIHVMYVASGKGYPYSPLDDAVLYALQKLTTQVTITDVRQNLVELADAQRPDLVLVLDGMDLPLDQVAVLRGKGIKTAIWLTDDPYYTDFTVKIVAHYDYVFTLEKNCVEFYRGLGCPEVHYLPFAAHREHYRPTTGRSPVSRDISFIGSAYWNRVHFFREIMPELMSYNTVINGIWWDRLPEAPLYGERIEIGKWMTPQETAVTYSGSKIVINLHRSHIDEAANNNTLLIPAVSPNPRTFEIAASGTLQLCDARDDMGSFYTIGEEIDTFASPREMMDKIRYYLTHEEERRAMALRAFERTLKDHTYTRRLHKLLTLIYG
>NZ_CP009287.1|WP_042267392.1|5877222_5878311_-|glycosyltransferase
MKSEKRKVHPRDYRDGYQEGYRLGLCEAVKRLNLPEVGACRPLKLMYVPQGFQAIDTGITEALGQLVSELVISSPETMLEVAARESPGAVLVMNGLHVFPENHLDQITEIRKLGIPTAIWFVDDPYFTEDTSVICRHYDHVFTHELACVEFYHDLGVSSVHYLPLCVNPQMFYPRRTGPQYQYDVVFIGNAFRNRTVLFDGLAPFLQGKKVLIAGGFWERLSAYEELSPFIKDGFIPPEETANYYSGAKLVINIHRPWEGGQDNRNSFQLPSRSINPRTYEISACGTMQLTDVREDLGNYYRPGRDLDTFENPDELKYKIDYYLKHEKERQQIALQGLRTTLRHHTFTSRLPHLLNVLTAQV
>NZ_CP009287.1|WP_025703306.1|5878532_5879315_+|AAA-family-ATPase
MDNAMLYIRHAELTRERVPSFQAYPFDLPVIRSFNRLAFQKRVTFLAGENGTGKSTLLEGIAAAWGFNPEGGTLNFSFNTRSSHSSLHKYLRLAKGVRRPRDGFFLRAESYYNVASYIDQLDEEPVEPGEPVKSPLIKNSYGGKSLHEQSHGESFFSAFVHRFGGQGLYILDEPEAALSPLRQMSLLVRMHELAEQQSQFIIATHSPILMSYPGADIYLLEGEGIRPVTLEETEHYTVTKAFMNDRAGMLRELLGDGGKG
>NZ_CP009287.1|WP_155990293.1|5879356_5879524_-|hypothetical-protein
MKCGTFYNNLASGKDVGMRNAARKTTSWRLERQQCKKSSISCSNPPPEPQQRMKC
>NZ_CP009287.1|WP_025703307.1|5879644_5879830_-|aspartyl-phosphate-phosphatase-Spo0E-family-protein
MGDKQYQARIEQARKELHALALELGIQHPRVLSQSVKLDVLINEYIDCQADDDGEFSRRGH
>NZ_CP009287.1|WP_025703308.1|5879819_5881265_-|hypothetical-protein
MKRIFKAEILIALAGCGLIIYLLFVQPFVGVADNGDFERMMNTVGLDYYNAAESYADRFFSFSHSRFAYENLFQGFYPSSQILLVLVPRLLAGLVHGSYFDIRLLAAVYALLLLAATWMIVKLGGSCSYITGLLLGAGMLIVFYDIGYLAYFNSLFGEPVSMVSMLLTFALGLRLAGQERPTTKGLTLFFIAVLFLVCSKIQNAPVGIAFSLIFLRLMTLNGTGSWRKLAMRFAVAVCLVSVIMYVAAPKELKHINLYQTVFFGILNGSPDVRGDLRELGLPEKLEVLAGTNYFQSGTAIKQDDPSLQADFYNRVSHKDVLFFYIKHPSRLAEGMKYAAQNSMDLRPYYLGNYEKSEGRPEQALSYTYSTWSQFKREVLPHSLGFLAVFYLLYYAGVLFEYFRSRDLRGRIAGELLMLLGLIGLFSFLVPIMGDGRADIGKHLFLFNVSFDMMAVVIFGWVVHKLVRLVQSVAGKSGRYGR
>NZ_CP009287.1|WP_025703309.1|5881274_5883173_-|LTA-synthase-family-protein
MNENKPVRVGGHFYIVAGLVWLKLLLLRGLFFDRIAWEWIAADLAPVLLLMGILALVIPARMKTGVYWAFNGLLSLLLFAASVYFNHFGSVPTYLAFYELNQVFQVKESVESTIQSIDYLFFADLVIAGFYRLFRRWKRGPALPLRRYVSPGARRVQWIVILVSIIGGGALSAYSVHAARGVTNELVQAESAGFLNYEVFAAMKSQEDNGLIGTGDIRETIAKVDALEAAYPYSSKPAGTVPEYFGSQKNKNVIVIQMEAFQNFPLHQSLDGQELTPVLNRLAGEGFYFPHVYQQIGAGNTSDAEFMSNTSIYPIATLAMSTGFGDRVLPSLPRLLRDKGYEAYTFHVNKVGFWNRNELYPALGFNGYYEKGDFKNDHFNAFGASDEQLYKTAVEKLAVLQSKGTPFYAQLVTASSHHPFKIPNAFKRITLPDSLQNTMLGDYLTAINYTDYAIGTLIDGLKQNGLWDHTVLVLYGDHFGLQPKDVPPEQVEEALGIPYDSRISRFNIPLIIHVPGLAQGQVVKQTGGQLDILPTLANLLGVSLKQEGFTAFGHDLLNIDRNVVGMRYYSPTGSFFNNEIMFVPGKGFADGEAVSLDTLQPVADIHKYQSDYEYILKLMGLSDEYVKLLPQR
>NZ_CP009287.1|WP_025703310.1|5883497_5883818_-|hypothetical-protein
MQVRSGAPVPERAGHKLRLSFIAAAIILLLAGAGAYLQQKGLLGEGRQAGVFYQEVKTPDLTGAGLRKTAERIMQEQLGKKLPFVSLERLQEAEQASVIFRIGVAR
>NZ_CP009287.1|WP_025703311.1|5884056_5885394_-|5'-deoxyadenosine-deaminase
MANILIRNAEIITMNKQEEIIYGDIRIRDNLIAEIGSGLVEQGDERVIDAKNRTVIPGFVQTHIHLCQTLFRGKGDDLELMDWLRKRIWPLEAAHDEESLYYSAMLGIGELISSGTTTIVDMETVHHTDFAFQALAGSGIRALSGKVMMDQKNADAPAALQEETAASLQESVDLLEKWNGYGNGRIQYAFSPRFVISCTEPLLREVRDLSERYGVKVHTHASENLGEIEIVQAMTGMRNIVYLDHLGLANERLILAHCVWLDDEERRILRDRGVHVSHCPGSNLKLASGIADTPGMLHDHIHLSLGADGAPCNNNLDMFNEMRLAAIIQKPLHGPTTMDARSVFRMATIGGAKAVGMEDQIGSIEAGKKADLAILNLYNFHTFPSFDVDPISRIVYSATRADVETTVIDGEILMDKGLLKTVDKDTVLHEANRSIKRLLARTSLA
>NZ_CP009287.1|WP_025703312.1|5885748_5886288_-|GNAT-family-N-acetyltransferase
MSGEKIRNARRDEIGAIMELIAKCVQVMQAGGSDQWNESYPNKEVISEDVDKGTLYVCEEQGAIAGIIVLDEEQAEQYDAIDWAQGQGPHLIMHRLAVHPEVQGKGIARKLIAFAEEHARSSGYTSIRLDTYAKNAKALALYPSLGYEHRGVVDFPGRTADFSVFEKVLTASGNNGQAN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_29

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_29

5987585-5987659

Orphan

Consensus_repeat	Method
CACCCGGCGGTGCTCCAACAACGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_29

>merge|NZ_CP009287|29|5987585-5987659|CRISPRCasFinder
CACCCGGCGGTGCTCCAACAACGGTAGTTCTGCCGTTGTTTTCTTGCCTGCCGCCCGGCGGTGCTCCAACAACGG

>NZ_CP009287|29|24|5987585-5987659|CRISPRCasFinder
CACCCGGCGGTGCTCCAACAACGG	TAGTTCTGCCGTTGTTTTCTTGCCTGC
CGCCCGGCGGTGCTCCAACAACGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025707016.1\|5982458_5983724_+\|sporulation-integral-membrane-protein-YlbJ	unknown	unknown	gnl\|CDD\|274333
NZ_CP009287.1\|WP_025707022.1\|5989770_5990835_+\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP009287.1\|WP_042267444.1\|5992707_5993727_+\|LacI-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224525
NZ_CP009287.1\|WP_025707683.1\|5995810_5996563_-\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133005
NZ_CP009287.1\|WP_025707486.1\|5980622_5980853_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707017.1\|5983810_5984614_+\|NAD-kinase	unknown	unknown	gnl\|CDD\|235317
NZ_CP009287.1\|WP_025708467.1\|5997875_5999372_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|133029
NZ_CP009287.1\|WP_025707483.1\|5977743_5978154_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707015.1\|5981670_5982054_-\|globin	unknown	unknown	gnl\|CDD\|381281
NZ_CP009287.1\|WP_155990502.1\|5994732_5995155_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042267440.1\|5980935_5981649_-\|DUF2225-domain-containing-protein	unknown	unknown	gnl\|CDD\|378340
NZ_CP009287.1\|WP_174469036.1\|5988632_5989598_-\|lipoyl-synthase	unknown	unknown	gnl\|CDD\|235493
NZ_CP009287.1\|WP_025707020.1\|5987765_5988362_-\|YutD-family-protein	unknown	unknown	gnl\|CDD\|368821
NZ_CP009287.1\|WP_025707485.1\|5980434_5980626_+\|YycC-family-protein	unknown	unknown	gnl\|CDD\|379493
NZ_CP009287.1\|WP_025707681.1\|5993868_5994546_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|224561
NZ_CP009287.1\|WP_042267448.1\|5996562_5997879_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025707018.1\|5984836_5986015_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|377924
NZ_CP009287.1\|WP_025707484.1\|5978531_5980331_-\|M3-family-oligoendopeptidase	unknown	unknown	gnl\|CDD\|341070
NZ_CP009287.1\|WP_025707019.1\|5986052_5987516_+\|PDZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|223864
NZ_CP009287.1\|WP_025707023.1\|5990913_5992611_-\|alpha-glycosidase	unknown	unknown	gnl\|CDD\|200477

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025707016.1\|5982458_5983724_+\|sporulation-integral-membrane-protein-YlbJ	gnl\|CDD\|274333	TIGR02871, conserved_hypothetical_protein, sporulation integral membrane protein YlbJ. Members of this protein family are found exclusively in Firmicutes (low-GC Gram-positive bacterial) and are known from studies in Bacillus subtilis to be part of the sigma-E regulon. Mutation leads to a sporulation defect, confirming that members of this protein family, YlbJ, are sporulation proteins. This protein appears to be universal among endospore-forming bacteria, but is encoded by a pair ORFs distant from eash other in Symbiobacterium thermophilum IAM14863. [Cellular processes, Sporulation and germination].	9.85063e-92
NZ_CP009287.1\|WP_025707022.1\|5989770_5990835_+\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	8.29521e-21
NZ_CP009287.1\|WP_025707683.1\|5995810_5996563_-\|glycosyltransferase	gnl\|CDD\|133005	cd02511, Beta4Glucosyltransferase, UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.	1.55919e-16
NZ_CP009287.1\|WP_025707017.1\|5983810_5984614_+\|NAD-kinase	gnl\|CDD\|235317	PRK04885, ppnK, inorganic polyphosphate/ATP-NAD kinase; Provisional.	5.04912e-134
NZ_CP009287.1\|WP_025708467.1\|5997875_5999372_-\|hypothetical-protein	gnl\|CDD\|133029	cd04186, GT_2_like_c, Subfamily of Glycosyltransferase Family GT2 of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.	7.66146e-10
NZ_CP009287.1\|WP_025707484.1\|5978531_5980331_-\|M3-family-oligoendopeptidase	gnl\|CDD\|341070	cd09607, M3B_PepF, Peptidase family M3B, oligopeptidase F (PepF). Peptidase family M3B Oligopeptidase F (PepF; Pz-peptidase B; EC 3.4.24.-) is mostly bacterial and is similar to oligoendopeptidase F from Lactococcus lactis. This enzyme hydrolyzes peptides containing between 7 and 17 amino acids with fairly broad specificity. The PepF gene is duplicated in L. lactis on the plasmid that bears it, while a shortened second copy is found in Bacillus subtilis. Most bacterial PepFs are cytoplasmic endopeptidases; however, the Bacillus amyloliquefaciens PepF oligopeptidase is a secreted protein and may facilitate the process of sporulation. Specifically, the yjbG gene encoding the homolog of the PepF1 and PepF2 oligoendopeptidases of Lactococcus lactis has been identified in Bacillus subtilis as an inhibitor of sporulation initiation when over-expressed from a multicopy plasmid.	0
NZ_CP009287.1\|WP_042267444.1\|5992707_5993727_+\|LacI-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|224525	COG1609, PurR, Transcriptional regulators [Transcription].	4.23968e-101
NZ_CP009287.1\|WP_042267440.1\|5980935_5981649_-\|DUF2225-domain-containing-protein	gnl\|CDD\|378340	pfam09986, DUF2225, Uncharacterized protein conserved in bacteria (DUF2225). This domain, found in various hypothetical bacterial proteins, has no known function.	4.41454e-67
NZ_CP009287.1\|WP_174469036.1\|5988632_5989598_-\|lipoyl-synthase	gnl\|CDD\|235493	PRK05481, PRK05481, lipoyl synthase; Provisional.	0
NZ_CP009287.1\|WP_025707020.1\|5987765_5988362_-\|YutD-family-protein	gnl\|CDD\|368821	pfam06265, DUF1027, Protein of unknown function (DUF1027). This family consists of several hypothetical bacterial proteins of unknown function.	3.03224e-50
NZ_CP009287.1\|WP_025707485.1\|5980434_5980626_+\|YycC-family-protein	gnl\|CDD\|379493	pfam14174, YycC, YycC-like protein. The YycC-like protein family includes the B. subtilis YycC protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 50 amino acids in length. There is a conserved HIL sequence motif.	8.72791e-17
NZ_CP009287.1\|WP_025707681.1\|5993868_5994546_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|224561	COG1647, COG1647, Esterase/lipase [General function prediction only].	1.35028e-35
NZ_CP009287.1\|WP_025707018.1\|5984836_5986015_+\|copper-amine-oxidase-N-terminal-domain-containing-protein	gnl\|CDD\|377924	pfam07833, Cu_amine_oxidN1, Copper amine oxidase N-terminal domain. Copper amine oxidases catalyze the oxidative deamination of primary amines to the corresponding aldehydes, while reducing molecular oxygen to hydrogen peroxide. These enzymes are dimers of identical subunits, each comprising four domains. The N-terminal domain, which is absent in some amine oxidases, consists of a five-stranded antiparallel beta sheet twisted around an alpha helix. The D1 domains from the two subunits comprise the 'stalk' of the mushroom-shaped dimer, and interact with each other but do not pack tightly against each other.	3.09893e-30
NZ_CP009287.1\|WP_025707015.1\|5981670_5982054_-\|globin	gnl\|CDD\|381281	cd14772, TrHb2_Bs-trHb-like_O, Truncated hemoglobins, group 2 (O); Bacillus subtilis TrHb like. The M- and S families exhibit the canonical secondary structure of hemoglobins, a 3-over-3 alpha-helical sandwich structure (3/3 Mb-fold), built by eight alpha-helical segments. Truncated hemoglobins (TrHbs, 2/2Hb, or 2/2 globins) or the T family globins adopt a 2-on-2 alpha-helical sandwich structure, resulting from extensive and complex modifications of the canonical 3-on-3 alpha-helical sandwich that are distributed throughout the whole protein molecule. TrHbs are classified into three main groups based on their structural properties and named after Mycobacterium sp. genes glbN, glbO, and glbP: TrHb1s (N), TrHb2s (O) and TrHb3s (P). TrHb2's belonging to this group include monomeric Bacillus subtilis trHb (Bs-trHb), which exhibits an extremely high oxygen affinity, and a dimeric TrHb2 from the thermophilic aerobic spore forming bacterium Geobacillus stearothermophilus(Gs-trHb).	4.97822e-61
NZ_CP009287.1\|WP_025707019.1\|5986052_5987516_+\|PDZ-domain-containing-protein	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	2.6019e-93
NZ_CP009287.1\|WP_025707023.1\|5990913_5992611_-\|alpha-glycosidase	gnl\|CDD\|200477	cd11338, AmyAc_CMD, Alpha amylase catalytic domain found in cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	0

>NZ_CP009287.1|WP_025707019.1|5986052_5987516_+|PDZ-domain-containing-protein
MKSGKVITAALSGCLAVSLILAPAALAADSSQAASGTDQAQAAASTDQINEIMQYLEQYNVEGIDQDTLIRGAIDGMVNTLNDPYSQYFDKDEAAEFSHAVDLEYVGIGIRMVYTAKELYIEEVVAGSPAEQAGLKRGDTILKINGVKIENTKGDELSGTAGTKVSLLVSRKGMLKTFSVKRSEMASTSVTSKMLGQNIAYISIGGFTQNADEEFTTALDKMRAGGMKSLVLDLRDNTGGYMDSAYNIAAKFMDKGIMMYTSDQSGVLTPVTITDGSKIGVPVVVLTNEYTASASEALTGALHDNKLATVVGTRSFGKARIQSLIPVSDGAELKLTTQKYLTPSKEDFNHIGLAPDIEVQGKTAQLITALQIAGMNRMTASGDNHILDVNGSPFAGNVGLIKQGNTIYASSRVLAALLESEVSWDAKNKKVLVTNGTGKVSGFALASKEALSQNNETFIDVKAFQQKFPSLVWSYNASQNQLKLSVK
>NZ_CP009287.1|WP_025707018.1|5984836_5986015_+|copper-amine-oxidase-N-terminal-domain-containing-protein
MKKLLSLMGISLLAFMLAVPAFAADKPIKVYINGSNVAFTAGSPYLKNNTVLVPFRVIFEKMGLNVLWDAKTGTVTGTSASLTISLKIGSSRATVNNLVKKLATAPSSISGTTYIPLRFVAEATGGTAVWDAASRSVKIDTPKAQDNSEQQITDLMHLSNEYFNSENASGYYSLVAFNSVPAGSVDNLKEYFKRYDMVNTIESLDILTLQGNEAVVHTVEKSVRKGGDYLPDERYEYLHTLVRKNGVWKIESSELQDSSVLLTPEQGKTAAVVPQSDDSAIKDSLSKYYAARNAKNMDGTLAQLTYYGEEYEASMKDALTEYFDGYNLTDTPNSSNIFYYTPDEAALYVESSVKDADSGKDYTQSSIFIFSKSSSGQWTIDDSYIVSYSDKK
>NZ_CP009287.1|WP_025707017.1|5983810_5984614_+|NAD-kinase
MRYYVLDRGDELSIKLAEQFHKLAAERNLELDAKSPEIVISIGGDGTMLHAFHTFIDQIPNLAFVGVHTGHLGFYADWKADELPALADYMCGAGSAEPHKPRIVKYPLLELEIHKKSGSSSHIALNEFTLKGVDGTVVIQVDINDVTFEMFRGDGLCVSTPSGSTAYNKSLGGAMVHPTIEALQIAEIASINNRVFRTMGSPLLLPKHHHCDIFSRKDQRLLLTIDHNNIPVDDLISVRCQVSDKKISFARYRPFPFWNRVREAFLI
>NZ_CP009287.1|WP_025707016.1|5982458_5983724_+|sporulation-integral-membrane-protein-YlbJ
MILKKNYSPLLGVLLAGCMLLMMMNPASSLDAALRGLSVWWDVLFPSLFPFFVISEMMLGFGVVHLFGALLDPLMRPLFNIPGSGGFVAAMGYVSGYPVGARLTAKLREQGLLSRVEGERLVAFTTSSDPIFLLGAVSVGFFHDASLGLILALAHYGGGLIVGLLMSFHGRPKNSPSGPPQSVPHIVPQLPKGAEGAGRLRLALRSMAEARQRDGRGVGELLKGAIQSSLQLIIVVGGLVVFFNVLMELMDRAGIMSALFSFTGGLLSLAGFPAELSTALVSGLFEVTLGTRSAGAAAAPVPLQFKVAAAAWVLSWGGLSVHAQVASILNGTGLRYLPFLAARLVHAFLSAGLVLLLWKPIAGSGSGLDHSSATAAAGFSAAPLSGFAASLSWLGLLLGTALLLSLLVMLLHRIPRPGRRQ
>NZ_CP009287.1|WP_025707015.1|5981670_5982054_-|globin
MNPNDSIFDNLGGAEGVHRLVESFYAKVQLHPRLGPLFPADITPVLEKQYQFLSQFFGGPALYSELHGHPMMRARHMHIPITPERAEEWLECMKEALEETGVEEPLRTFVLSRLAGPAHHFVNMPQE
>NZ_CP009287.1|WP_042267440.1|5980935_5981649_-|DUF2225-domain-containing-protein
MRALPELIPLYTIKVICCNCEHEFTTSRVRPSLKKAVRRDADFCSYYKDENPDYYVVRVCPDCGFASTENSADKLADWQRKAFREQVGSRWVRRDFGDKRSWEIALETYKLALLCAQSIKDKDRIIASLLHHIAWMYRYQGDVEQEQRFLRYSLGMYIKVFENDGIGGNDARLMYLIGELYRRIGEFSNAVKWFSRLINDQKIMDAAMIRAAREQWALLREQMNGGEPEEDGLPSGT
>NZ_CP009287.1|WP_025707486.1|5980622_5980853_+|hypothetical-protein
MIPFSHTWPYDILLEDLYVQYCPFCDKENVILPMKPKELQTVREGKKKLLVFPCCKTSLTVIDTDTDYLLFDRAVR
>NZ_CP009287.1|WP_025707485.1|5980434_5980626_+|YycC-family-protein
MKPLQISPETAVTLAKQLGVPLEHLMHMPQHILLQKIAELSKKQSEGTTGSEPESQAPEKGEQ
>NZ_CP009287.1|WP_025707484.1|5978531_5980331_-|M3-family-oligoendopeptidase
MKQPLSLTWDLDSIFPGGSASAEFEHFLKQLETDIGVLDQQVAATASPANIESTKQLDDVIALLQSCSGRLVQASEFAGCLGAQNQQDKGAVRLSSKVAGLRAGFEGVSSKFDDVLRQTSDEVWQEWMARPEIAPLKFVLSESRDLAREKMSPELESFALTLAVDGYHGWSEHYETIVGSIQIPCEDEEGTRMLSAGQAFNKLDDPDPKVREAMFHKWEEAWGSAADYCADTLNHLAGFRLNLYKGRGWEDVVKEPLAINRMSRASLDTMWDVITKAKPALVSYLSRKAKLLGLESLAWVDVEAPVGKSTGKIPYDTAAKDIVAQFRNFSPKLADFAERAFDSNWIEVEDRPGKRPGGFCVSFPESKESRIFMTYSGTPSNVSTLAHELGHAYHSYLLEDLPVFNQNYAMNVAETASTFAEVIVADAQVKAAASNEEKIALLEAKIQNSVAFFMNIHARFLFETRFYEKRKQGLVNAEELSALMVEAQKEAFCGVLSEYHPHFWASKLHFYITDVPFYNFPYTVGYMFSTGLYRIALQEGTSFADKYDSLLRDTGIMTLEELVQRHLGVDLTQPDFWQGAADLIIADINEFLKLTEHSA
>NZ_CP009287.1|WP_025707483.1|5977743_5978154_-|hypothetical-protein
MLRTEQLSLARQIDLVFKELQEELSGLSSGTLFVQIRNNVIGKFGIRHNPLAGRSGTFAADQEGLNTVQQSSFRLMALESLKYKRRWTHGEISYEFAVRQGMVVVDATLESNYNMANLMIRYPRNVQSDKPDQFYG
>NZ_CP009287.1|WP_025707020.1|5987765_5988362_-|YutD-family-protein
MIVIGGKGYELVLDHKDGWNPEAFRGRYSEVLDRYDYIIGDWGYSQLRLKGFYRDNHPKVNRDTAISGMVDYINEYCNFGCAYFVLHKLKETPKEGSFKDILTKEVPEPGTDDEMEQASAEPVVTAKVQRDPSSRPSNSNPAARDKNAGATAKENGAKDRPVREHQSRNHRNKENQGRRNNKDSQGRPPQNQPQNPLN
>NZ_CP009287.1|WP_174469036.1|5988632_5989598_-|lipoyl-synthase
MRQQTFKGATTIQAKAGFSTLTNNRTAKQPKPDWIKIKLTTGDNYQEIKGMMRSKTLHTVCEEARCPNIYECWANRTATFMILGDICTRACRFCAVNTGLPTELDLQEPERVAEAAENMKLKHCVVTSVARDDLKDGGARIFAETVAAIRKRLPLCSVEVLIPDFLGERDSLEIVMNSKPDILNHNIETVERMSDRVRARAKYRRSLELLGRAKEIKPEIPTKSSIMLGVGEEWDEILQAMDDLRAVDCDILTLGQYLQPSPKHLNVEKFYTPEEFALLKEEGLKRGFSHVESGPLVRSSYHAHEQVKSATAAREERSVSL
>NZ_CP009287.1|WP_025707022.1|5989770_5990835_+|M23-family-metallopeptidase
MLALFRIAAIRKTVLCLSAAAMLWGDSDAVAAAAGNNLPAVSGEASGKGNLTASRKELYDQMSAATGIAWFRFAAIDQYERTIAKKKSGTEDQAKSRLTGISFPPPVWCGPLNPDQADQSPESISFFGGFGKDGSGDGLADPENDADVLYSMASHLMKYGDSSSDFNIGVWEYYHNGRATLRIEQFAKLYEHFGRLDLSGSAFPLPVGKTYSYRSTWGTGRSWGGARIHEGTDLFTPHGMTVRSTCFGIVETKGWNRYGGWRIGIRDIENRYHYYAHLAGFEKSLSRGDIVAPGQTIGWVGSSGYGKPGTQGKFPPHLHYGIYRDRGITEWAFDPYPLLKQWETQEYRALRKKK
>NZ_CP009287.1|WP_025707023.1|5990913_5992611_-|alpha-glycosidase
MIRWFLYHTAEDPFAFPVGSGTLKLRLFVQNGQQLSCTVIHSDRYDSPGNEIPLPMERIGSAGAYEIHEAVIQSETGKCRYLFHVENPAGEYVWYGERGLSENREHAGSFQYAYMHRPEAVKLPSWSSDAVVYQIFPSSYNGGTLKGITEKIPYLHQLGITAMYMTPIFDSPSAHKYNTSDYYKVDPAFGSTEDLKALVDEAHRHGIRVLLDAVFNHSGDNFFAFKDVLEHGENSRYKDWFVIHSFPVVQTPSPNYETFAKAEAHMPKLNMDNPEVADYMMEVSKHWVREAGIDGWRLDVANEVSPRFWTRFRRELKAEFPELLLIGEIMHDSGPWLRGDQFDGGMNYVLRDAVLEFFAEQYAGPVRFMEQVLHQEALCNDQANSAMFQLLGSHDTLRFLTACKQGGRGWDHENTAIQRMRLAVFFQMTYIGMPMIYYGDEVGMEGATDPHCRMPMVWEEQEQNTALHAWYTRLISFRKQYEVLRKGAFRPWFTDEARNVLGYIRCSGQDQMGLLINNSPNRYQLELSRFRSDASVLTDLLTGATFPGTGRLLVEIEPFGCLMLN
>NZ_CP009287.1|WP_042267444.1|5992707_5993727_+|LacI-family-DNA-binding-transcriptional-regulator
MKVTIKDIAIAAGVAKSTVSKVLNDSPKISQETKQKVREIMKQMNYTPSSIATGLARQSSSNIGLLIDMSKSSEFLNQFFYNIIGGIESVIGSLKYELTIANVEHNHPHGHFLHRLVRSKKVDGLIANTSVLTEELCTQLNHLEFPYISLGEISASGCWVDFDNEAGGRMLTSHLLEEGYSAVAFIGGCEGDPLFIRRLNGYRQVLGQAGKPLREEWIINGEAEEAFGYQAAKQLLLSETTPDSVICMSNFAAYGVLLAARELGVQVPAELGIATFDDYPLSRYTTPPLTSLNLDTFHLGVSAGELLMERIGGKNESVQKLLLAPELLPRESTCRISRA
>NZ_CP009287.1|WP_025707681.1|5993868_5994546_-|alpha/beta-fold-hydrolase
MERCLFIHGFTGGEYEISPLAQFLERHDCHARTFTLKGHGGSRNDLLQSDRHEWRQSAEDQLQDLLLGGGGVHLIGFSTGALIASHLSVQYQGRIKSLTLLSTPVFPLNLLEIARTLGSPVMVRNYLSKFGATPAKATKEFLRLVRESFNIYPQIEIPTLIVQGRRDHLVRAKSAAYLQRTIPSGSKRVLMVERSGHMLCHAEHSGQMMNEVLQFIQTSGRAGLN
>NZ_CP009287.1|WP_155990502.1|5994732_5995155_+|hypothetical-protein
MQFADAPESLRSALLFVHEQLTQHNTALAMPGEAGNLPQIIAELVRQAVKLRCFGLAAELAGLFPEHRTDWAEALYESGPLKEAGELLITLAADQQAGERFPFIWRRCCLIKATMAKLLNGSSICLPVRQGMNPPASGCR
>NZ_CP009287.1|WP_025707683.1|5995810_5996563_-|glycosyltransferase
MNKGRPLRKTSGNRLTAMMQVRNENGRYLEQVLEELSGFVDDIVIVDDASTDGTARLCESFAKVTKLVTLGESRFNREWELRRTLWELAVSTEPDWLLSVDADEFYEEEAKQEMRRLIDQDVYDWVAFRLYDFWGGTTHYREDEHWNIHTKHTRTLVRYLPQYYYFTPQMDHHVPRLPLSYAVLPGFLTELRVKHYGWALPPEALREKYDRYMELDPEGKWGSLEQYASILDENPRLVEWQERRGLGRPE
>NZ_CP009287.1|WP_042267448.1|5996562_5997879_-|hypothetical-protein
MNYLILSHVPWEDYPYKRLLDLLPERAEVCFAGGMTSDQQAGSGVRPVSLAELKTLDGKGYTILVSSPYWLQDVLALKPGYIVALLEPCPEGEDNAMWDKYSALLAARADLVGTASERLYLEQNLYRPKVVYLGGDHPLSCGLIRRGDRLFFLTDYEAIWTRALTELWQPASPGAGGWLFTQHRLRADFYVSTCGKLPAQPTVHYLAATYLYLLGDEAAGRYLARSFELMLLHDYTDCLHSHYRFFSAIEAKKGNLDLAVAQYEITAFTEEERKTAVQMRQWLDNGQFELLQAEIYRVNEDIAEAVRILENLSCPEAQPLLLQNYITSFQWDKALQIQRESGLNGGEAGNIPLPDGAVLPGSAVHPASAVLLAGTEIPVYGGIQLPVIEGTLHLLHGRRHAAIRSFLRVAGAGGEARTLFAEMADLEEAVGRLKGEDR
>NZ_CP009287.1|WP_025708467.1|5997875_5999372_-|hypothetical-protein
MSDSKHSVRNERLAGRYSYLEREGLLPLPVQDGITVVVELRYAAWAGECLNLLQQHSGASISLIGVAMDTDFPLKPLAEAFPGATFIPYEPGKYGVNEALAYAGTSFVALIEDSVMVTPGWVGNLLWPFVDDPSVQAVAPRSSTELGEAREQLHFGTEQELSAYVTHSLGRRQGEWHEAAVLCGSCLVFTRELLQRIGGFDSTLVKRQLMVADWCLRARQRGARLVLSDAMYVHSLQPLPEAHAKAEHDAIQDGVQAYLAKWGLDHSAVNVEEGILPIPSDVSVLPPRPGIALEKTAAAPVPLVTAVVYSERRLMLTPEESCESQKRLQGQQSYGNIRWVWIRDSRRDALPEFPVREQDAVIAVQGEDSWLHALENVAALYGSEIVVYLSASADYDSHYVKRIAEAVLHGSADLVVSRAASAMEEPAPHQGLSPLLPLKLPLERIAHRSGIVPGRITRQKVSGHGLQLEPQPSLAIGYIGGPPEANILPRRSGGEVRL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_30

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_30

6066532-6066605

Orphan

Consensus_repeat	Method
AGGTGGAAAAAGGATCACTAATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_30

>merge|NZ_CP009287|30|6066532-6066605|CRISPRCasFinder
AGGTGGAAAAAGGATCACTAATTGGCCCCAGCACACGGATCTCCGAGCCTAAGTTGGAAAAAGGATCACTAATT

>NZ_CP009287|30|25|6066532-6066605|CRISPRCasFinder
AGGTGGAAAAAGGATCACTAATT	GGCCCCAGCACACGGATCTCCGAGCCTA
AGTTGGAAAAAGGATCACTAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025704896.1\|6059904_6060897_-\|PD40-domain-containing-protein	unknown	unknown	gnl\|CDD\|274305
NZ_CP009287.1\|WP_025704897.1\|6061046_6061451_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704901.1\|6065956_6066385_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP009287.1\|WP_025704894.1\|6044689_6056725_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_CP009287.1\|WP_025703992.1\|6079533_6080538_-\|LCP-family-protein	unknown	unknown	gnl\|CDD\|224235
NZ_CP009287.1\|WP_025703991.1\|6076793_6079556_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|349463
NZ_CP009287.1\|WP_025704903.1\|6067451_6068921_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP009287.1\|WP_081758724.1\|6069610_6071023_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP009287.1\|WP_025704904.1\|6068936_6069632_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|223816
NZ_CP009287.1\|WP_025704900.1\|6064336_6065818_-\|multidrug-efflux-MFS-transporter	unknown	unknown	gnl\|CDD\|129794
NZ_CP009287.1\|WP_025704892.1\|6036326_6037583_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273616
NZ_CP009287.1\|WP_155990313.1\|6075608_6076667_-\|DUF418-domain-containing-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_155990314.1\|6073216_6074227_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238566
NZ_CP009287.1\|WP_025703988.1\|6074480_6074951_-\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP009287.1\|WP_025704902.1\|6066984_6067188_-\|sporulation-protein-Cse60	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704898.1\|6061463_6062186_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|226425
NZ_CP009287.1\|WP_025704895.1\|6056752_6059371_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|341234
NZ_CP009287.1\|WP_042267452.1\|6071150_6073208_-\|iron-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|236720
NZ_CP009287.1\|WP_025704893.1\|6037598_6044651_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|237108
NZ_CP009287.1\|WP_025704899.1\|6062359_6064189_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|372624

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025704896.1\|6059904_6060897_-\|PD40-domain-containing-protein	gnl\|CDD\|274305	TIGR02800, Protein_TolB, tol-pal system beta propeller repeat protein TolB. Members of this protein family are the TolB periplasmic protein of Gram-negative bacteria. TolB is part of the Tol-Pal (peptidoglycan-associated lipoprotein) multiprotein complex, comprising five envelope proteins, TolQ, TolR, TolA, TolB and Pal, which form two complexes. The TolQ, TolR and TolA inner-membrane proteins interact via their transmembrane domains. The {beta}-propeller domain of the periplasmic protein TolB is responsible for its interaction with Pal. TolB also interacts with the outer-membrane peptidoglycan-associated proteins Lpp and OmpA. TolA undergoes a conformational change in response to changes in the proton-motive force, and interacts with Pal in an energy-dependent manner. The C-terminal periplasmic domain of TolA also interacts with the N-terminal domain of TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi , Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. [Transport and binding proteins, Other, Cellular processes, Pathogenesis].	3.30275e-14
NZ_CP009287.1\|WP_025704901.1\|6065956_6066385_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	2.22433e-15
NZ_CP009287.1\|WP_025704894.1\|6044689_6056725_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP009287.1\|WP_025703991.1\|6076793_6079556_-\|hypothetical-protein	gnl\|CDD\|349463	cd06244, M14-like, Peptidase M14-like domain; uncharacterized subgroup. Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism.	6.00259e-93
NZ_CP009287.1\|WP_025704903.1\|6067451_6068921_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	0.00758857
NZ_CP009287.1\|WP_081758724.1\|6069610_6071023_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	2.66168e-62
NZ_CP009287.1\|WP_025704904.1\|6068936_6069632_+\|response-regulator-transcription-factor	gnl\|CDD\|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	4.57014e-85
NZ_CP009287.1\|WP_025704900.1\|6064336_6065818_-\|multidrug-efflux-MFS-transporter	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.13011e-84
NZ_CP009287.1\|WP_025704892.1\|6036326_6037583_-\|hypothetical-protein	gnl\|CDD\|273616	TIGR01426, Glycosyl_transferase, glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. [Cellular processes, Toxin production and resistance].	5.04901e-100
NZ_CP009287.1\|WP_025703992.1\|6079533_6080538_-\|LCP-family-protein	gnl\|CDD\|224235	COG1316, LytR, Transcriptional regulator [Transcription].	3.89358e-62
NZ_CP009287.1\|WP_155990314.1\|6073216_6074227_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|238566	cd01146, FhuD, Fe3+-siderophore binding domain FhuD. These proteins have been shown to function as initial receptors in ABC transport of Fe3+-siderophores in many eubacterial species. They belong to the TroA-like superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA-like protein is comprised of two globular subdomains connected by a long alpha helix and binds its specific ligands in the cleft between these domains.	5.48837e-76
NZ_CP009287.1\|WP_025703988.1\|6074480_6074951_-\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	1.21523e-36
NZ_CP009287.1\|WP_025704898.1\|6061463_6062186_-\|AAA-family-ATPase	gnl\|CDD\|226425	COG3910, COG3910, Predicted ATPase [General function prediction only].	4.90545e-97
NZ_CP009287.1\|WP_025704895.1\|6056752_6059371_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|341234	cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA). The adenylation (A) domain of NRPS recognizes a specific amino acid or hydroxy acid and activates it as (amino)-acyl adenylate by hydrolysis of ATP. The activated acyl moiety then forms thioester to the enzyme-bound cofactor phosphopantetheine of a peptidyl carrier protein domain. This family includes NRPS similar to mycosubtilin synthase subunit A (MycA). Mycosubtilin, which is characterized by a beta-amino fatty acid moiety linked to the circular heptapeptide Asn-Tyr-Asn-Gln-Pro-Ser-Asn, belongs to the iturin family of lipopeptide antibiotics. The mycosubtilin synthase subunit A (MycA) combines functional domains derived from peptide synthetases, amino transferases, and fatty acid synthases. Nonribosomal peptide synthetases are large multifunction enzymes that synthesize many therapeutically useful peptides. NRPS has a distinct modular structure in which each module is responsible for the recognition, activation, and, in some cases, modification of a single amino acid residue of the final peptide product. The modules can be subdivided into domains that catalyze specific biochemical reactions.	0
NZ_CP009287.1\|WP_042267452.1\|6071150_6073208_-\|iron-ABC-transporter-permease	gnl\|CDD\|236720	PRK10577, PRK10577, Fe(3+)-hydroxamate ABC transporter permease FhuB.	0
NZ_CP009287.1\|WP_025704893.1\|6037598_6044651_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|237108	PRK12467, PRK12467, peptide synthase; Provisional.	0
NZ_CP009287.1\|WP_025704899.1\|6062359_6064189_-\|APC-family-permease	gnl\|CDD\|372624	pfam13520, AA_permease_2, Amino acid permease.	6.42591e-29

>NZ_CP009287.1|WP_025704901.1|6065956_6066385_-|MarR-family-transcriptional-regulator
MDIYNEELGYIMWRVTNNWQKLMKQELQEVDLTHVQFALLRSCHSLNERGGSPGATQIQIAHDSFMDPMMASEVLRTLEKKGYVNRVPHPQDTRAKLIRLTESGANVMERANQIVLEADKTFFSKLEPELEGFIKQLRLLMR
>NZ_CP009287.1|WP_025704900.1|6064336_6065818_-|multidrug-efflux-MFS-transporter
MNEASQIKVKYKIIPVLVSLLLGGFIGLLSETMMNVALPVLMEKWDLTASTAQWITTGYILVVSIIMPVSALLLQWFTTRQLFTTAITLFIAGTLAAGFAPGFEILLAGRLIQAAGTAILMPVIFNTVLTIIPPAKRGTAMGMVGLVMMVAPALGPTVSGLIVDKLSWQWMFWGLIPFLIIDLTVGLLNIENVGQITKPKIDILSLLLSTIAFGGIVYGLSSVGEGEGGWGSPVVVLSLSAGIVALVFFILRQLTMKQPVMNLRAFKYPMFTAGTLFIVIGFLTIFSTSYLLPIFMQGSLALSALYAGLLMLPAGLINAILSPIIGRSFDKAGPRVLVIPGVIILAAAMWMFTGISMDTPVYRIVLLHCCMTVGIALTLMPAQTNGLNQLPRELHPHGTAIMNTLQQLASAVGTALIVSVMTSGQKEYLRTHTGAAAQELAANSLSAGVHNAFILAAAITLIGLIAGFFVRQSVIPRDGKRNFKLQDKSGLGF
>NZ_CP009287.1|WP_025704899.1|6062359_6064189_-|APC-family-permease
MMSSVKRFLIGRPLKSDQLGEQKLNKTKALAILSSDALSSVAYGPEQILLVLVTLSAAAFWYSIPIAAGVLVLLLALILSYRQIIFAYPHGGGAYVVSKENLGKYPGLVAGGSLLVDYILTVAVSVSAGTDAITSAFPSLHPYNVFIAILFVLIITTLNLRGVTESASFLAYPVYLFVLALFVLIGVGVFRVLTGSVPADLHTPIGTPVAGISLFLLLKAFSSGSSALTGVEAISNAIPNFKAPAPNNAAKTLAAMGTLLAVLFTGIVFMAYYYGVTPREDATVVSIIAEQVFGRNFMYYFVQGTTALILVLAANTGYSAFPLLAVNLAKDKFIPRMFTVRGDRLGYSNGILILGLLSILLIIAFEGRTEHLIPLYAVGVFIPFTLSQSGMMVKWIRQKPQGWITKFIINTAGALISFIVTMMFFLTKFPQVWPVLVFLPLIILLFYRIHKHYEAVADQLRISTCEEPPLAIEGNIIILPVAGITHVVENSLRYAKSLGAEQIIAVHVPFEREDDAIFEEKWKNFHPEIRLVTLYSPYRSIIQPLTKFIDTVQRKAGESDYQVTVVVPQFIPKKGWHNILHNQSSLLLRAHLLYRRNVIITTVPYHLKK
>NZ_CP009287.1|WP_025704898.1|6061463_6062186_-|AAA-family-ATPase
MISDLYVRQARINQSSIPKPRRYPFSLPVIRHIHQIDFKSKVTFFVGENGTGKSTLLEAIAANFGFNLEGGSRNFNFSTQASHSELYEYMTLVKGARRPKDGFFLRAESFYNVATEVDQLAAAQSYGGKSLHAQSHGESFMSLLLHRFWGDGFYILDEPEAALSPSRQFSLIARMDQLVKQNSQFIIATHSPILLAYPGADIYVLSEEGLTQTPYESTEHYLLTKAFLNNPQGILRELID
>NZ_CP009287.1|WP_025704897.1|6061046_6061451_-|hypothetical-protein
MNKRTVIPLAAACTLLTGIWAGWPVLKALPDLFNFMSSFTVTVHNQSDYDIVSVETGIRSGDTRDTFTQEIPSGKTVKITPDLSFIGEGAIYLKYTDSRKETKEVIVCGYTESVSGSSELTIGNDDTALEQDCY
>NZ_CP009287.1|WP_025704896.1|6059904_6060897_-|PD40-domain-containing-protein
MLAVQAVPYDHNRGWIAYTSDRGGAFDIWLYRPQEGLNFQLTKGLGAEFSIPYWSPDSRRITFIGIGNVVYLLDTATLAVARIDQIEPYTLLDWSPDSRFLTYVKNGRIVVYDTFSHRSYAIPEPGASDVQWFPSGKELLFAAPDSTGLTQLFRIRADGTDRRQITHNTDGPLHDVRISPDGTFALYTFPGASISIISTVDLATGTIYTLEGGPLAKNYFPAWAPDSRSIAYSATVYKEPDYYSLIQTDSRTGQNQRTLAASGCFATPVSWSPEGDQIAYLSGCAGAESASQLWIADIREPVPVNVLSGGRITALQWSPRVRRIPENICT
>NZ_CP009287.1|WP_025704895.1|6056752_6059371_-|non-ribosomal-peptide-synthetase
MYKSLVEMLIARSKDAHKGITFINGDNEHNYYSYKEMYTRATGALRFLRSKGIQSGDEVIFQIENNETFILAFWACILGGMIPVPVNVGNNDEHKHKLIKIWNVLHRPFLITDSKSLLKPDLTAHQTDFYRFASSIANRTIHTETLEYSGAEDVVLCSPESHDIAFIQFSSGTTGDPKGVTLTHDNLLTNLYDLKKSRNYSANDSFLSWMPLTHDMGMIVFHLLPLTCGGRQSLLPTWVFIRRPTLWIKKASDLKSTVIASPNFGMKYFLTFFYRSQCSYEWDLSNVRVLLDAAEPIDAKLCNEFLEVMDKFSLPRTSLLPGYGLAEATAAVTLYKPGHEFTSYNIVRSSINTGSRVQIVEENHKDKEYIVSLVDLGNPIENCFVRVCDEEDRVLDECVVGHVQIKGNNVTNGYYNNEEATRKVFTKDGWLRTGDLGFMKDGSLIVTGREKDIIFINGQNFYPQDIERVAEEFTGTRIGVTAACGVYNEQLATEEVILFVNYKDKPETFVPLAIELRKQLNLKVGIHVRHIIPVKKILKTTSGKVQRYKMKSLFLEGQFTGLLAEMEKVTNTITSRIDADQPKDTVEATLLSIWANVLGNDRLGVKDNFFEIGGTSTLLAQMFEQVDREYPGKITLTDLFGYPSISKLAGLILQDGSDINASVHIRALELPEEFFKNGSHAEEEDGLSRTLSFSVDHEFTSQLKHIAAAEHLKHESILLSMFVYLLYELSPSARIEVQTMMDGSGWVVPFTADFAQIDRLEDLFTLANETVKPGTREIYHIQDVSRFFIHKKNSVVPFICKEHLNLSAGNLLDVYDLVLKFNEDHNGIHFVCEFNSNEVRSEPMLNFIQRYAQALYGVVNRFAKDHKPLGVM
>NZ_CP009287.1|WP_025704894.1|6044689_6056725_-|non-ribosomal-peptide-synthetase
MIKKLLDIPEEKAINLLVQVESACNNDIAIIGIAVKLPSAENIDQFWDNLCAGRDHISEFPEKRRSDVEQYLKFCGAAESPGFIQGGYLEEIDKFDYSFFRITPKEASLMDPYQRLFLETAWTAIENSGYGGERLTGSRTGVYVGSGGEHEYRQMIEKADPDSFVPSVAGNLSPVTASRISYMLDLKGPSLMVDTACSSSLVAVHLACQSIMNNDCEMAIAGGIQLDLFPLQDQPKVGIESPTFKVKTFDDRADGTVKGEGVGAVVLKPLAKALQDGDHIYATIKGSSANQDGKSIGITSPNVIAQESLILNAWKQARIEPESITYIETHGTGTKIGDPIEVDGIQRAFSRYTDKKQFCAIGSVKTNIGHLYYAAGIISLIKAALSLHNKKIPGTLHFEKPNQNINFIDSPVYPNTGLADWNPAGFARRCGVSSFGMSGTNCHVVLEEAPLRKDSPIKADQRPAALTLSAQNPLSLEKIIGDYINYLAGADAAEFRDICYTSNIGRGHYSYRLAIIAENLEDLITKLNRVSLSPDNFEIGKGGIYSHSSLANSGAWEQSGSGMPEPGSEFLHSLCSSYANGEGTDWTVVYTGERRRIVPLPTYPFERKRCWIRLPDTRQKHHEEPAMALNFNRKETLADMYHNENKRHVINSLKNIFSEVSGLEPGDINIHTNLLEMGLDSILLTSSRHAIKEQFDIDVPMRMFFEELSSIDSIGDYLVSLIPLNAGPEPSGYQEAAAAVGLQEQAAAIQMPLMDRQASQREESSYKSPANLSAVESVMEKQLQVMSQQLELLHALGTPEEEPSTVGPAGRLKAVQPLQAGTGSKGHSPDPEAANETKRAFVPYQHIPLKASTNFSAIQQQFLDSFISAYTHKTAGSQKHTDDYRYVLANNRNVAGFRPYWKDIVYQIVVDHSSGSRIWDIDGNEYVDLTMGFGVNLFGHNVPFINDGIQRELERGMAVGPISQTAGEVAALICKFTGTDRTAFFNSGTEAVMVALRLARAATGRSKVVLFSGSYHGTFDGVLAMGGSVNAGAQPIAPGINHNMVEDIIVLNYGTAVALEIIKAHANELAAVLVEPVQSRRPDLQPVEFLKKIREITSMSGTALIFDEVITGFRMHPGGAQALFDIKADLATYGKVIGGGLPIGVVAGTDRFMNGIDGGAWKFYDDSQPAHEERRTFVAGTFCQHPLAMNAALAVLTHLERMGPELQANLNFRTARLADQLNTYFREQNVPVDVVHFGSLFRFVLRGDLELFYYLLLNKGLYIWEGRNCFISTAHTDEDIQYIVDAVKQSIGEMQAAGFLPGPDNRPRGGYQPKPLPSGPPRESLTRAPQVLKLTEEQQQISLVIHSNDTHGVVHHETVGLYLRGELNKAALETAYHKVLNRHESLRSTISADGNEQIVASHANADIFFADILADYSALGDEAINQALLKENAAAFDSVMGPLIRLRVLATARHEYLLALSAHHIIADGWSLIVFLQELAALYSTECTGTRSLLPTPTPFSDYAIWQKRMLESQPKEKAAAYWKNKFSVQTPAFELHSFRIRDAAGVRKGSRHRYVLDIPLTAKLKAVSQSMKVSLFTVLLSAYKVLLYRISNHKELVVGIPTAGQMQMGQKHLVGYCLNILPFSTTINPEMTFREYLSYMMEELLELYEYQDYSYASLMKELHSMDGSVHPPQINTMFNMDKSLETPDFTGMDVELLQSPVSYSKYDLSMNIVELDHELMIDFEYDPNLFDTQIITGWANYFNRILLAVLQPDQKLQEISLLSLEEEKILRTRGTEQAAALRADLDKYGVAWDKADFFAILDKDMHPSPVGVPGEVYLARLTEPSLLAEQPCTSTGIMAMYTADFEIKVIGHHSRLMSQNGRMINLDTIQEQLGLHPLIGHAAVTVKPSGTFQQDQKILAYITPRGTSIPKVREMKKFLLSRIPGNFIPTAFMVLDEMPLNSEGGINERLLPAFDENKALREEIMLPENETEKRLAEIWRNVLDVEPVNTNDDFFELGGNSLKASLLAFSIQKEFSTDISLRMLFEHPTVKGLAKAINGAGKSCLPEITPLGKKDWYPQSSSQKRLFAIEQMGETGIAYNITGVLHVEGKLDPGRMEEAFQRLVTRHEPLRTSFELVHDEPVQVIHDDIPFSISYGIAEDEDEPELVKQFILPFSLNQAPLFRVHIVSRSDHEHIVIMDMHHIIADGISANILCNDLISLYSGENLPGLEVQYKDYTALHNEMLNNERIRLQGEYWQQLLSDDVPSLTLPLDFPRPAVQSFDGACYSVTLDSDLTRRLKVLSNRLKTTLYTLLLASYNILLSKYSNQEDIVIGSPVAGRFNYSTNNMVGMFVNTLAMRNQPAKHKTFQEFLLEVKENTLKAFENQDYPFEELISKLGIERDISRNPVFDVMFVLQSLDLAVPDVHLDDIRLNGYEFKNDVAKFDLILEVIENSENLTLNFEYCAKLFEESTIIRMSERFLRILTTVVENCNVLLSDIDLLPKEETDRLIYTFNDTATAYPGGKTVYQLFEEQAARTPGAVALVHQGESITYEHFNRKANQMAWMLRSNGVKPDTTVGILMEHSFELIISLFAVMKAGGAYVPIDPTYPSERINFIIKDSNLEIMLTHKGLAEKCQFQGVVIDAASSKWYCGDDSNPVSVNSPDDLAYIIYTSGSTGFPKGVMTRHQGLTNYVWWGDKTYVHGEAVDFPLYSSIAFDLSVTLIYIPLISGNKVFIYSGVSYESLLEAVVIDNQVDFIMLTPSHLKILGEYDLSRLKIRKFIIGGEAFDPFYAKKFFSRLAEDVEVYNVYGPTETTVACTFYRYYPDKDLRNPVPIGRPIFNVHLYVVDQNGKLQGIGIPGELCIAGDGVSRGYLNREELTREKFVPDPFRTSGMMYRTGDLVRMLQDGNVEFLGRMDDQVKIRGHRIELGEIENQLVKQPGVNKAAVIIRTGPTDSRYLCAYYTADFPMNSELLRESLSRLLPRHMVPSFFVQMESIPLTASGKVDRKKLPDSFESFQMEEAYSAPQNFIEEKLALVWEEVLGINRVGTGNSFIKLGGDSIKAIQIVSRLKKYGLSLEVKELFLHQNIKGISPFVKQNIKRHNQGTIEGPVKLTAIQKWFFEQNFAEMHHWNQSILLHNERFDAQFIRQAFERITEHHDALRMVYRHTGQAGVEQSNRGLAGELFSLEVTDLTACDDHTDLMHAGIKTIQEGIDLEKGPLLKLGLYQTTNGDYLAIVIHHLVVDGVSWRIILDDFASCYLSLDNGEEAGLIEKADSYQKWAEALEVYANSPMLLQELAYWTDVNRIAVPALPKDSEAGNGKIKDRYQTKIVLSEKETTNLLRHAGDAYQTETLDLLLAALGAAIKGWANVDRVRINMEGHGRETLIQDLDITRTVGWFTSTYPLVLELANSHELPLHIKTTKETIRQTPNKGMGYQVLKYLTSPELRAAVDFNVMPEISFNYLGQFGNEASYGTFEIYNTFMESTESPESHRPYAIDINAMIVGNRVEIRVDYNPGQFNETTMSRFAELLLNSLKLIISHCTGQERIQRSPSDLTYKKLTFEELDDLNRLYPGGITDVYTMTPMQESMLFHALKNKRSGAYYEQCILDLKGDIITELLNESFKLIVGKYDILRTRFVYKKLHRPLQIVLGSSDFRLEFEDITHMESSEKMEHVERLKALDREKRFDLVQGPLMRAILLKTGDSVYQMLWSFHHILMDGWCIGIVLKDMLEHYKQLNAGSRPSLETHQYRLYLDWLAGKNKEEAKVYWMRYLEDYKYKELLPKEGTSKEFRLAVLDIKLEEKVRIAVTHVASSSGITINSFFQAVWGILLSKYDNAEDVVFGAVISGRSPEIEGIERMVGLFINTIPVRVRLSGKTFHELAGEIQSSFISSEQYGYVPLSDIQAWSHRDLINHVMVFENYPLDREIRDMDGQQMEYGFQIAGCEILEHTNYDFSIIIEPGEDFIIRIVYNALAYDKETISILESYLLAIIGQVTACPQIEAGDVEVLSQEEKLKLMNVFNKPNRREAADFNF
>NZ_CP009287.1|WP_025704893.1|6037598_6044651_-|non-ribosomal-peptide-synthetase
MSIQNANINVLLSTSEMKKKKKYWLNRVVGSETDSRILADPHKSALGIEGKESLRMDIPDGLFQQLQHLSNRSDDSLYYILLTALKWLIVKHTESSIITVASPVHIDENSTSEAYNHYVPIIDTFTAGMTFRESLLQVRETALGAYDHQDYPFDKIIEDVQAISDRDFSFVRHVLCLLTNIHNDAVIPDVSSNIVFGFTRDDAGISLNLIYNLKYFTGNFVMQLAEQYFQILKGTAENVSIKLGSMSLLSAEESLELLKEQTRTYQNMEDMTLYELFEEQVRQTPDHVAVKFNDQSITYRDLNAKANKLARVLRNQGVGANQIVGLLVERSIDMAVGILGILKSGAAYLPLDIKSPEERLQFLIEDAGIEVAVSNKQTEEKLKRDGLTVIRLDDDVLLENESDLDLILSRALDHPAYVIYTSGTTGLPKGVIIEHRSISNTIQWRKSEYSFDANDRMLQLFSYIFDGFLTSFFTPIVSGATVVFLDETEARDPLAIIRLITLNKITHFIAVPTLYSALLRNMKPEEAQSLRIVTLAGEKVTPNLLMASKQLHPGLEIVNEYGPTESSVLATLKRDLKSDDTELTIGKPIGNTRVYIVGDNLELKAAGMVGELCISGAGLARGYLHNEELTRDKFVSNPFEANERMYRTGDLARWTTGGEIEIIGRADTQVKLRGYRIELGEIENRLLEYNGITEAAVALWEDQNDNSRIYAYIVCDRVLSALELRESLSKSLPEYMLPTHFFQLEQFPMTPTGKMDRNALRNQDLKELGARFQHPTNEIESRLVEIWKNVLEVDKVSIHDNFFMLGGHSLKATMLLSRLHKEFQVEIELDEIFEKQTICNLAALIKSKRPGTYSSILPTEKRDYYPMSSAQKRMYALYHMEGESTSYNMPEVMVMEGELDVGQVESVLRQMISRHEILRTSFHMIHHEPVQVVHDTIDFSIDYTEEKIDDIRLEADRFIQPFDLDTSPLFRVKVIKIASRRYLFMFDMHHIISDGISIGLFIKELALLYGNAVLPEPEIQFKDFSVWEKESAENGDFKQQEEFWLNMFKGEVPLLELPVDYKRPVHKSYEGSKIPFTLDKETTCELKELAGDNGATLYMLLLALFNIMLSKITNQEDIIVGSPVTRRRQVELESVMGMFSNTLAMRNFPAGNKRFKDFLNEVKSSALSAFDNQDYQFEEIISKLDIVRDTGRNPLFDAMLILQNIAVNQFQFGEMKVSFYEHEHNISRFDITLHCLEGLDGLLHCSFEYCTRLFKRETVETMIDYLKAIVSQVIVDREIRISDICMVSENAVQQILAFNQTSFDLPAGQTIHGLFEEQAKRRGDEPALEFLDQTMSYGELNKRANQLARLLREKGVTAGSVVGLMFERSFEMMIGWLGILKSGGAYLPIDPAYPDERIKFMIEDSGIQLVLTQNIPYNWLDFDGEVIDLNSAGLNNVDGSNLTVINRSSDLAYMIYTSGTTGKPKGTLLEHKGIVNLTASNKEQLKIQDRERVVQFSSISFDVSLMDISMSILLGGTLCLTTKEILNDNSCFEAFLNSNRITAAILPPTYLANLNPNNIHTVDKMITIGSAISSGLVNEWKKKCEYINAYGPTETTVYSSVWIANEQGEMDDPVPIGKPILNTQMYILDKYRNLQPVGIPGELCIGGIGLTRGYWKRPEMTADKIITAADSRIGKVYRTGDLARWLPDGNLEYLGRMDEQVKIRGFRVEPQEIKAELLKIEGIKDVIVTHRKNQLQHASICAYYISAMDYSVTELRKQLLSKLPEFMIPAYFVRMEAFPLTSNGKIDQKLLPVPENNMQRHSGYIAPRNEIELMLTEVWEEVLRLEKVGIEDNFFEVGGDSLKAMQVAAILGKHRLHMEIKDLFHRQKIAELSECVRDLRNNPILENPVGRIDSSGTEGDASIEVLCSIWLAEIKDQELKHTESIRNAPLVGKHLPAAVQKYHLMNAEKVHTSIPFRSCGDIGKIQKAILRLVNEQVLLRSVIVNDGENTYFYEHGSVYNLPFILIDLSGFDAARRSECLAYLQDHFNKLPFERDNGLLYRLVLVQTAPEDYMLLYSADHAVSDGLSLGIITDQLAAYFAGDSSLPVHSLKHHQNYWDYADQMQKGPQNLSEQKLCEMFRLAEFAAQARELEKYINSKNRHKSTMLDLVIPLRLGNKEKSHWQLALEVMIPLCGKMFGIREVPFWLVNNGRRYEENLYYDIVGDFADVIPVLAGNNQTDSLEKWIQHQVNECVKGNISFVNLMLNGGTAYPFAETSRLLEKLYSGASIMFNYYGVLQSCSKDLTLQEIAVSAEYGERAEDSNGKIGFYVWQGEDYLKLKIILPFEEDRDDLLFVLQEAAGNIQPIVTQRD
>NZ_CP009287.1|WP_025704892.1|6036326_6037583_-|hypothetical-protein
MSKVIFLSYPFFSHVIPSLALVRELLDRGEEVIYYSVEAYKDAVEESGAVFRDYGDIIRLLEAATDQINYAGYPTPVDILYSLVPSKILKSKKVVQRIVNRVLADNPDYIVRDCEAYWGRLLGNILDVPVVCYITTIALNNRMMDINKEGFMESVFSMSADSLPVAEKESVSQVLDHITAGIAKEQGVEGYTVLDALAGGDEFNIVYTSREFQPYAETFGDNYVFIGPSVRASKEKTDFPFQKEADRPVLLIAFGNIFNNTLELYKRCMEAFRDTGFSVIMSVGKKVDISLLGDVPANFVVVNQVPQVELMPQVDVFLSHGGYNSLSEAIDNHVPLVLFPQGADQVATSSRIEETGAGVYVRNREISPVELLEIVEGVYQNSEYRHNCRQLADSFRLSGGAKLGADAILAFISEAIVV
>NZ_CP009287.1|WP_025704902.1|6066984_6067188_-|sporulation-protein-Cse60
MAYYAVETFEAHDITELSDMIDELISAMKQGQLIDIKYQAVPTTVSTNTAHKGPSDTKYTAMVIFTK
>NZ_CP009287.1|WP_025704903.1|6067451_6068921_+|VCBS-repeat-containing-protein
MNKSALSALLGLTVLVTGCSTMKTPSDLLKAPSQGSADGTITSIVQPFLSAGAHLTVPVQSESSSAIQLQDLDKDGQDEILAFYKTDKTDYEINALVLSKTGGEWKKLINITGVGSELDYVKYADVTGDGAADVLLGFSGGEGLGRELSVYSLSGGQLSEILKQPYDYLAVGDMTNEGKTDIALIHSTVDGDNQPESHLQLLRLHGGKLQSLSDQNISGMVMQAMYAKVAPAKSALIIDAAIGAHSSYTSLLTWAKGSFTDILAAEDYQHPALAESKNLVLKPLAPEPDGLLGEHSLAIKDYPLYSEDVNGDGIVEIGFLVPPAGSQSFAPLATPFITKYYQWDGQTGLKLVQEQFDRWGFNFHIPASWIGKYQLDLTGESPAPWEHISFSYKDANSGEKAQLLELRLLTKKDWQAVEAQLIAAKVSYKLLYELQNTSDETAPTVLVAALPAANAGSKLTGSAAREYEQLKLTLEEVQQLAGTPQKPRP
>NZ_CP009287.1|WP_025704904.1|6068936_6069632_+|response-regulator-transcription-factor
MKVLILEDEKPIRDLLRINLKRAGFDVVEAATGESALAIAGKDRDFDIAIIDLMLPGISGFQVCAELRRQYPRLGIIMLTAKSQEVDKVMGLESGADDYVVKPFSPVELTARVRALYRRMYPEEAPPPQNSIQLAPFTLLLDERKLLKNTIDVPLTPTEYSIVKLLMEQPGKAVSRDDILTSVWGQYFMGELKIVDVNVSRIRQKIGQESSGPQYLETVWGFGYLWRTQSC
>NZ_CP009287.1|WP_081758724.1|6069610_6071023_+|HAMP-domain-containing-histidine-kinase
MEDAIVLKGIRARLIVYITLVLLLIVLLLEGVFITAVHYYYLGSAMETLTSRAATSATFFNKYLEGYSINERARYILENLSPDESSKVEVLSPEGKVIINSFGFASSERIDTPDVKAALSSGKGTYQSLTPGKEERILAVSIALKESGTSIGVLRYSVSAEPLYSVIVKILINAAWVGLLVIAFGFLLSVIIAKRIVEPIQQLTGVAKEMATGNFAVRAKKRHDDEVGTLAVTLNYMAEEMVKSEKIKYDFISSVTHELRTPLTSIKGWGETLLVGDLSDTEETLMGLEVMTGETDRLIGLVEDLLDFSKFQAGELTLELEPYDLRGLLEDLLLQFRYRGSTKQIRLYADIPDEPLPVDGDFNRLKQVFVNLLDNAFKFTPAQGEIRLSAVLGDTQISITVADNGEGIEESDLEKLGTKFFKGKSRQSGSGLGLAICKEIVEMHGGRLRVESEFTKGTSVIVELPRYRIQ
>NZ_CP009287.1|WP_042267452.1|6071150_6073208_-|iron-ABC-transporter-permease
MNINTGKETSPGMTWRLIGIFGGGLAALFVVSLLSLCFGEAQIPAAAVWNGLLHRQDVMEHNLLWDIRMPRTVIGILAGAALAAAGALLQTITKNPLASSDTLGINAGAYFMVVLGMVAFPAMQQQYPLVLAAAGGLLAALAAYVLSGGRKATPVRLALSGMIVSMVLGAFTSALHIFFQTETQNLFLWGSGSLIQLDWSGVQYAWPFVIVLLGISLLGGRQFDALELDESTARSLGQRVGLTRAAGLGISVLMAAIVVSVVGPIGFVGLVAPHLVRLSGIRKHRLLIPASALWGALLITLADTLARMVRSNLGEMPVGAVMAIIGAPWLIWLVLTKMKNISGSGTGQSSMSIGGAMLRMRFAPTAIFMTVLLIGVILVSMSLGGTRIPIADLLESLAGGGDGAYSVLLNLRLPRTLVAACGGIALAISGVLIQSAVRNPLADASIIGVTSGAGFGALAVLVVWPGLPVLALPAAAIVGGVIAAAFVFTLAWRRALNPSVLILLGIAVSAIGSAGIQAMIVKASLWNSTAFIWLTGSTYGRSWEQFYSLFAFLLVLLPVAYYLGRRFDLLAFGDESSTGFGLPVRGTRLWAMIIGVVLAAGAVASVGTIGFLGLMAPHAVRMMIGHHTRRSIILSGLLGGLLLVIADTAGRTVIAPTEIPSGLIIMLLGAPYFLFLMYRSLVRGA
>NZ_CP009287.1|WP_155990314.1|6073216_6074227_-|ABC-transporter-substrate-binding-protein
MLIIVVLVAAGCGSKNTNNSAADGGATNNAAATNAAATSKGDETATGPIVLKDAKGEVKLDKPAQKVVVLEWTFTEDVIALGVQPVGNADNENYKLYVTSEAPLDAGVTDVGTRSEPNLETIASLKPDLIIANTDNHEAIYDQLKAIAPTLILGLYPPEGQGDQYTEMENIFKTIAAAVGKTAEGDKVLADLDAHYADAKTKLAAAGKEGLNYVLTQAYSYQNAATMRLFTDNSLAVQTLDRIGLKNDWKPEKFEMYGFTTSTVEALPAVKDTNLLYIVQKDDDIFSNELKDNSVWNGLTFVKEKRTFGLASTTWVFGGPVSSKVLVDEVVNTLTK
>NZ_CP009287.1|WP_025703988.1|6074480_6074951_-|C40-family-peptidase
MKKFIISIIGSALLFTAMPASTYASEISLENEVNGVLGTPYVWGGTTSAGFDCSGFILYIMEKFNAGDLPRTTGSQAKAGTAVSKDDLRLGDLVFFNTLGTGVSHAGIYIGDGQFAHSSSSRGVRISKLSESYYRDRYVTARRVVSDTSYRQMTGE
>NZ_CP009287.1|WP_155990313.1|6075608_6076667_-|DUF418-domain-containing-protein
MFLQHFTSNNVIASIVSGNTMILFILCSGISYSIMTQRMIEKGEEMAAFRAQMLARAIFIDLIGYLLIMLNGPFSVILPAYATLFVLALVLVRCSRRTLFTISVVLLVAGPPLMIVGGSVLSEAYFLGDIAGGPLSALGVAPVFVAGMVIGRLNLHSMRNATWLTVTGIIMLVISKLFSTSVLPGLSQSFEKWLLDYTNIATTQPDPYAIWPHNVAPPLWQMLLTSGPQSGSTFQLLIGLGTSLLVLGLTCLIAKKGAAILKPFAAVGQVALTLYAAQFVLAWVLIIAGMNYNIGEIPFGGVIVVLITLIAGGLLVRFSISPLETMMRRFDRLFSGFQPAAGPVPVQSSNIS
>NZ_CP009287.1|WP_025703991.1|6076793_6079556_-|hypothetical-protein
MLKKLLNKGTLALLISLSLLTGTTAHGAKSPVENKPVQVLKMDHNVASMTEKKTFQVRFNLPKGVDSQKISWTYGGKPLSEWRKYTFEQRKYTGPSFITVSHVKTKGGIFTASITFDLPYGTNNLAEPRLQQPLFASLMGTYELAAKADGHVIAQAPVKLAPYDSFLTYEELKPKIDAVTKQAAIKNKRYIHTESIGKSVEGRDIYLTIVARDKAAVDKYQNNTHPAMINNPKQLQADIKLGVFGDYAVPIWLNNIHPNESPGVDAIFNYFKSMALDDRITYNTTLSDGKASKVNFKVDDALKHVFFLMFYTDNPDGRVHTERGNANYFDLNRDNSYQTQPETRSVTEQITKWSPLSFLDLHGFDKGFLIEPATPPHDPNIEYDLLIDSMVEQAKAMGEAGIANTKYDYYHIPYEEHRKSVKDTKYVSKGITSGWDDASPAYTAVFAMHHGALGHTLEIPENNEESTKALYYSAAAATSYVMNNQKKLFLNQLKVYERGVDNIDNRAVDKYLVNAKNAEIGRPRQGNANFFPEYYVLPIDKSVQKNALEVYRMVEYFLRNGVQVECSTESVSVDGKTYPAGSYVVNMHQAMRGMANLVLYDGIDVSDYKSVAGEIVQNFPDLRGFDRYVIREPRVFAGKTKTVTSIVVPETTLPDNAGYILIRNTNNDAIKAVNKLLSSGKAVTMLTASKEGYEAGDFVVSNTDLKPLASKYVLDVDAFGENKPVGQQLKRLTVAALGEPEFVLENLGFAVTADQKKADILVNTFDSAELVKNGIPYIAYGNMGMKNIQDFIPGFTFAGPEWERYEGVFRADVSQDNVITAPYKEQENFYTVTGSYITAVPKTAKVLANISNENDFYKAGWWPGHAAAKGQIMAFTYKENNKNLMVFANDLTNNAHSQHQYRLLANSIFSAAAGRPVETY
>NZ_CP009287.1|WP_025703992.1|6079533_6080538_-|LCP-family-protein
MKRKKKRFVILASVFLVGVVAFVFYYVASIYKGLEGLSKTADHSPFYEVKAIDEKSVEPPKWTGKEPVNILLMGVDARGTNKGEIPRSDSMMVVTLDPVRDRIHVFSILRDTYTEIPEHGKNRINTAITHGPNTAMSAVGNLLGIPIQFYVYTDFQGFIKLVDAVGGVDFYVEKDMNYESIADKHEYDIDLKEGQQHLDGITALQYVRFRHDAMSDYSRTKRQRDFTNAIAQKMKSTTSIMKLPSILEEVSPYIDTNLSVNDMWKLASVGYQSKMEASEQIPPMELVKETRMGRAAVLAVSNPKELKEYIRNIIETDAPGQSEEGKPNVEEAIK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_31

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_31

6222573-6222693

Orphan

Consensus_repeat	Method
TCCCTTTCCTGCCGCTCCACCCCCACACGATAATCCTGTG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_31

>merge|NZ_CP009287|31|6222573-6222693|CRISPRCasFinder
TCCCTTTCCTGCCGCTCCACCCCCACACGATAATCCTGTGCGTAAATCCCCGCTCTCTCTGCATGTTTCGCCGCCCGCTCTTCCCTTTCCTGCCGCTCCACCCCCACACGATAATCCTGTG

>NZ_CP009287|31|26|6222573-6222693|CRISPRCasFinder
TCCCTTTCCTGCCGCTCCACCCCCACACGATAATCCTGTG	CGTAAATCCCCGCTCTCTCTGCATGTTTCGCCGCCCGCTCT
TCCCTTTCCTGCCGCTCCACCCCCACACGATAATCCTGTG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025704542.1\|6217454_6218087_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293792
NZ_CP009287.1\|WP_036707314.1\|6223665_6224859_-\|SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379330
NZ_CP009287.1\|WP_025704544.1\|6218656_6219271_-\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP009287.1\|WP_155990338.1\|6217092_6217269_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042268405.1\|6229111_6229618_-\|spore-protease-YyaC	unknown	unknown	gnl\|CDD\|131888
NZ_CP009287.1\|WP_081758672.1\|6216494_6217034_-\|RNA-polymerase-sigma-factor-SigY	unknown	unknown	gnl\|CDD\|182010
NZ_CP009287.1\|WP_025704546.1\|6219902_6220556_+\|SdpI-family-protein	unknown	unknown	gnl\|CDD\|379303
NZ_CP009287.1\|WP_025704537.1\|6214814_6215726_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009287.1\|WP_025704539.1\|6215966_6216188_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_155990337.1\|6216184_6216514_-\|DUF5345-family-protein	unknown	unknown	gnl\|CDD\|375100
NZ_CP009287.1\|WP_025709390.1\|6231085_6231922_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226354
NZ_CP009287.1\|WP_025709392.1\|6231918_6233226_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224096
NZ_CP009287.1\|WP_025709388.1\|6230119_6230839_-\|pirin-family-protein	unknown	unknown	gnl\|CDD\|380375
NZ_CP009287.1\|WP_025704543.1\|6218093_6218660_-\|thioredoxin-family-protein	unknown	unknown	gnl\|CDD\|379658
NZ_CP009287.1\|WP_020426842.1\|6229801_6230026_+\|DUF1128-domain-containing-protein	unknown	unknown	gnl\|CDD\|377674
NZ_CP009287.1\|WP_025709382.1\|6226528_6227824_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340863
NZ_CP009287.1\|WP_025709381.1\|6226022_6226526_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238042
NZ_CP009287.1\|WP_025709384.1\|6228221_6229007_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_CP009287.1\|WP_025704538.1\|6215725_6215917_-\|PLDc-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379161
NZ_CP009287.1\|WP_025709379.1\|6225097_6225760_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025704542.1\|6217454_6218087_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	2.59853e-72
NZ_CP009287.1\|WP_036707314.1\|6223665_6224859_-\|SAM-dependent-methyltransferase	gnl\|CDD\|379330	pfam13679, Methyltransf_32, Methyltransferase domain. This family appears to be a methyltransferase domain.	1.06044e-49
NZ_CP009287.1\|WP_025709382.1\|6226528_6227824_+\|MFS-transporter	gnl\|CDD\|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	3.19648e-56
NZ_CP009287.1\|WP_042268405.1\|6229111_6229618_-\|spore-protease-YyaC	gnl\|CDD\|131888	TIGR02841, Uncharacterized_protein_YyaC, putative sporulation protein YyaC. A comparative genome analysis of all sequenced genomes of shows a number of proteins conserved strictly among the endospore-forming subset of the Firmicutes. This protein, also called YyaC, is a member of that panel and is otherwise uncharacterized. The second round of PSI-BLAST shows many similarities to the germination protease GPR, which is found in exactly the same set of organisms and has a known role in the sporulation/germination process. [Cellular processes, Sporulation and germination].	3.97762e-42
NZ_CP009287.1\|WP_081758672.1\|6216494_6217034_-\|RNA-polymerase-sigma-factor-SigY	gnl\|CDD\|182010	PRK09638, PRK09638, RNA polymerase sigma factor SigY; Reviewed.	2.32829e-72
NZ_CP009287.1\|WP_025704546.1\|6219902_6220556_+\|SdpI-family-protein	gnl\|CDD\|379303	pfam13630, SdpI, SdpI/YfhL protein family. This family of proteins includes the SdpI and YfhL proteins from B. subtilis. The SdpI protein is a multipass integral membrane protein that protects toxin-producing cells from being killed. Killing is mediated by the exported toxic protein SdpC an extracellular protein that induces the synthesis of an immunity protein.	7.89917e-16
NZ_CP009287.1\|WP_025704537.1\|6214814_6215726_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	9.33223e-98
NZ_CP009287.1\|WP_155990337.1\|6216184_6216514_-\|DUF5345-family-protein	gnl\|CDD\|375100	pfam17280, DUF5345, Family of unknown function (DUF5345). This is a family of unknown function. It is found mostly in Bacteria. Members of this family are predicted to contain 2 trans-membrane regions.	1.289e-17
NZ_CP009287.1\|WP_025709390.1\|6231085_6231922_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226354	COG3833, MalG, ABC-type maltose transport systems, permease component [Carbohydrate transport and metabolism].	1.27327e-104
NZ_CP009287.1\|WP_025709392.1\|6231918_6233226_-\|sugar-ABC-transporter-permease	gnl\|CDD\|224096	COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].	1.19272e-66
NZ_CP009287.1\|WP_025709388.1\|6230119_6230839_-\|pirin-family-protein	gnl\|CDD\|380375	cd02910, cupin_Yhhw_N, Escherichia coli YhhW and YhaK and related proteins, pirin-like bicupin, N-terminal cupin domain. This family includes the N-terminal cupin domains of YhhW and YhaK, Escherichia coli pirin-like proteins with unknown function. YhhW is structurally similar not only to human pirin but also to quercitin 2,3-dioxygenase (quercitinase). Although the function of YhhW is not completely understood, YhhW and its human ortholog have quercitinase activity and are likely to play an important role in transcription and apoptosis. This N-terminal cupin domain of YhhW has a metal coordination site and is thought to have catalytic activity while the C-terminal cupin-like domain has diverged considerably and has closer alignment with C-terminal pirin. YhaK is found in low abundance in the cytosol of E. coli and is strongly up-regulated by nitroso-glutathione (GSNO). There are major structural differences at the N-terminus of YhaK compared with YhhW; YhaK lacks the canonical cupin metal-binding residues of pirins and may be involved in chloride binding and/or sensing of oxidative stress in enterobacteria. YhaK showed no quercetinase and peroxidase activity; however, reduced YhaK was very sensitive to reactive oxygen species (ROS). Proteins in this family belong to the cupin superfamily with a conserved "jelly roll-like" beta-barrel fold.	2.25209e-56
NZ_CP009287.1\|WP_025704543.1\|6218093_6218660_-\|thioredoxin-family-protein	gnl\|CDD\|379658	pfam14595, Thioredoxin_9, Thioredoxin.	2.31877e-49
NZ_CP009287.1\|WP_020426842.1\|6229801_6230026_+\|DUF1128-domain-containing-protein	gnl\|CDD\|377674	pfam06569, DUF1128, Protein of unknown function (DUF1128). This family consists of several short, hypothetical bacterial proteins of unknown function.	3.46916e-27
NZ_CP009287.1\|WP_025709381.1\|6226022_6226526_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238042	cd00090, HTH_ARSR, Arsenical Resistance Operon Repressor and similar prokaryotic, metal regulated homodimeric repressors. ARSR subfamily of helix-turn-helix bacterial transcription regulatory proteins (winged helix topology). Includes several proteins that appear to dissociate from DNA in the presence of metal ions.	2.32966e-08
NZ_CP009287.1\|WP_025709384.1\|6228221_6229007_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	3.77251e-38
NZ_CP009287.1\|WP_025704538.1\|6215725_6215917_-\|PLDc-N-terminal-domain-containing-protein	gnl\|CDD\|379161	pfam13396, PLDc_N, Phospholipase_D-nuclease N-terminal. This family is often found at the very N-terminus of proteins from the phospholipase_D-nuclease family, PLDc, pfam00614. However, a large number of members are full-length within this family.	4.02858e-05
NZ_CP009287.1\|WP_025704544.1\|6218656_6219271_-\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	9.68888e-47

>NZ_CP009287.1|WP_025704546.1|6219902_6220556_+|SdpI-family-protein
MKNFIWKWQDTVIVILGLLSLGYALVNYGRLPDQLPAQFSISGQVNTYWSKGSIIAFMGFMGLVFPLAMQFIKSFDPKKENYNKFPNAYKMIRLAIAALFDAMLVLNVSYGLDQSIPAGKIAMVALGLLFIVVGNFMPQIRDNYFTGIRTAWTLASPEVWRKTHRFSGVMWMIGGLLIVLGAFLPKSLSISMIIAALVIVIILPFAYSWLISTRSRA
>NZ_CP009287.1|WP_025704544.1|6218656_6219271_-|DedA-family-protein
MHFISDLISQLFEWIQSLGYFGIMIGLMIEVIPSEIVLAYGGYLVSQGHINYFGAVLFGTLGGVIAQIFVYWIGRYGGRPVLEKYGKYIFIKKKHIDHSEEWFNKYGTGVIFTARFIPIVRHAISVPAGISRMPLGKFTLLTTLAVIPWSALFVYLGYSLGDKWETIDEVAAQYTHELLLAAIAIIVIYFLFKWYKSKKKGSAV
>NZ_CP009287.1|WP_025704543.1|6218093_6218660_-|thioredoxin-family-protein
MKQNVAHKFGQGLTPRQFVEGMTKNQQAFESWYEKFAWEDQDDRAYFESLNHRDDLRVLILAADWCGDVVRNVPVVFRILETAGIKTEVLILEENQDVMDDFLTMGGRAVPIVIFTDTGGYVLGHWGPRPEHVQSLMREFKRENPDREAPDYESKIAEVRKAMGQAYGEGTESHAVIAKELRSLISGF
>NZ_CP009287.1|WP_025704542.1|6217454_6218087_-|MBL-fold-metallo-hydrolase
MLNIRSYNLGPLQTNAYLLTGADPGRGVIIDPGANPAALLRAAQGMEIEAVLLTHAHFDHIAGLDEIRRAKKCPVYLHTLESEWLENPKLNGSLMWPDATPAITTEPAEYDLADGQVLKLLGLTFRVMHTPGHSPGSVSFLCGNDLFSGDVLFKLGVGRTDLPGGRERDLIDSIRNKLYRLDEEVRVFPGHGPRTTIGFERQRNPYVPML
>NZ_CP009287.1|WP_155990338.1|6217092_6217269_-|hypothetical-protein
MKDTEEEVFEDEAHAAPASTTDVRDKKECLFWSFPHGKGAIQPWRRRLWELQNNSDRE
>NZ_CP009287.1|WP_081758672.1|6216494_6217034_-|RNA-polymerase-sigma-factor-SigY
MSDGTHERIIRAQQGDASALAVLLQEHYSFLYKYLVKATMDPLLAEELAQDTMVRCMEKIGAYNGASSFSSWLITIATRLYIDRKRRWKLEMKWKRQEEGIRSIRWRFESRNLEWSEVLDALSRLSSVQRMAVLLKHYYGYGYEEIADILQIPSGTAKSRVAAGLNQLRKELSDDEHRE
>NZ_CP009287.1|WP_155990337.1|6216184_6216514_-|DUF5345-family-protein
MMNTENDEELLRMLSADLERLDAQYDDISPPALPGLERLIAEEAHRRQLQSRRELQRFLLVALFMVSIVLFGLGFAPVTYWILQAAVPIAALGCLAVIRLRLRREDAEE
>NZ_CP009287.1|WP_025704539.1|6215966_6216188_-|hypothetical-protein
MKELQDVPYWLWGCLAVALLLQGTLIFHNAQKRGRGKWAWFWGIWGLTGMPTPLICYLLFVVLPDRKRADRKL
>NZ_CP009287.1|WP_025704538.1|6215725_6215917_-|PLDc-N-terminal-domain-containing-protein
MDEIKWGLIGPLLALQVLLAVIGLISLSKAERTRGPKWLWVIILIFGNLLGSVAYFTVGRKDN
>NZ_CP009287.1|WP_025704537.1|6214814_6215726_-|ABC-transporter-ATP-binding-protein
MPLLTVANLRKVYGGHTPVDGISFDIEAGKCVALLGPNGAGKTTTLRMLAGLLKPTSGEISFDGSPGGDYRKRIGYLPQSPAFYNWMSGQEYVVFAAKLCGIASKEAAGLAADVLEQVGLRDAARRKIAGYSGGMKQRLGLAQALIHRPRLLLLDEPVSALDPIGRREVMELLRGIREETTVIFSTHVLHDAEEICDDIILMNHGLIAEHGALSRLRSQYSIPVIRLTTEREEKAQRWLEDLAHRSFVEQSAVSPGSATLNVKNVELVRQIILQEAGSLDIPLLQFEAGSSTLEDLFMKVVGA
>NZ_CP009287.1|WP_036707314.1|6223665_6224859_-|SAM-dependent-methyltransferase
MYPVESLNALIEQVMSGRTLITATLSQLRSKGETTYTKVQVKPVELKGKLYYQFAYFTGPKVEHRNIPAEGAAEELMSLFREKFRQGLLCTIEADYQVLISKKYKVSILTKSPSKQEAPNLAHNRRKRYVLDEGEPVPFLIELGIMNSEGKVLAKKYDKFRQINRFLEMVEDVLADLPTGRPLTIVDFGCGKSYLTFALYHYLAIREQRELNIVGLDLKADVIEHCSALAAKLSYSKLRFLVGDIADYNELDQVDMVVTLHACDTATDAALEKAVRWGASVILSVPCCQHELFAQIESEVLNPLLSHGILKERFSALATDAIRAKLLDLMGYRTQLLEFIDMEHTPKNILIRAVKGASGDNTAKWREYSAFRDFLGAKPYLERVCADLLPGESAVQG
>NZ_CP009287.1|WP_025709379.1|6225097_6225760_-|hypothetical-protein
MFRRDYIVRMIEDMTAMVAKVMTLKQEKKTTEALWEVDELLIRHFRLNSRLLNSLSVEDIIDMYLLGGVVESDKLQGVARLLKEEGAIYTAAGDKEAGLFRAMRSLHLFLYADLHGADRALLQMPADIDELLRETQAYSLPAKTERLLLSYMESLGRYAKAEDSLYRLWEQGQDVGQEGKELYGRLLLKSPEELELGGLPAEEVREGLKEWERRTAAVRQ
>NZ_CP009287.1|WP_025709381.1|6226022_6226526_+|helix-turn-helix-transcriptional-regulator
MNENKEYQASGQPRPLKVSPEQEKLLESALRIKIMHLLAAEPLTSKQVAQKLEKTPGNVHYHISRLFEGGLLELVRTEAAGGIVQKFYRSKATWFRSENFSGFQFRAEDQVDHFTTRLTLSPEELESFRREMMDFISSWESKVTLGTEYGVDVVIGHLRTSEPEVTP
>NZ_CP009287.1|WP_025709382.1|6226528_6227824_+|MFS-transporter
MMPASNSESGKINPFRGFAAPFAKSRAFPFLWLGHLISFLGSSVTMVILPVLVYSLTGSTTTMGVVMAVYMLPNILMLPVSGHIVDRYDRVGIMMLADIFRALIMLATAVLALTGLLIIPLLLVLIGCYGLLDGLFQPAYAAVRATIFTPDIRVTANSVTQITTQTVRLIGPALGGLLITHLSAGIGFGLDAFTYVFSFICLIYLRRTLIARVRTDASGTAGSMAAPSPSTDWKQDFMEGLAVLRSHPWLWITILAFSFINICYGGITSILVPWLFKVHHGWEPYLYGLAVTCSGAGAILAGLIFGTRQRWSRRGLMAYGGAFISGVSLLLLPFVPSAAGAVILFSLEGFGLMVFMLIWEISMQELVPQEAFGRVASLDLLGSFALLPVGYILVGWLADLIGGVATIAIFSGLGMACIALVLSIPAIRNFQ
>NZ_CP009287.1|WP_025709384.1|6228221_6229007_-|alpha/beta-fold-hydrolase
MEIVRCEGSNICYSDQGKGDVIVLLHGFCGSSSYWEQVIPFLSGNYRVIAPDLRGHGVSDAPLGAYSIDQMADDVLSLLNALEIPECYLLGHSLGGYIALSFAQRHPSRLKGFGLIHSTGYPDSGEAKENRLKSVSKIQNEGIFAFVDGLVPGLFAPGAAPQLLERTKEIGYRTPPQGAVGAAMAMRERPDRRDVISATALPVLLVAGSEDSKVSPERTFTSNKPNVTQATISGVGHMSMYEAPERLAEIIKDYVHAAVRN
>NZ_CP009287.1|WP_042268405.1|6229111_6229618_-|spore-protease-YyaC
MDASGLIFFFREIASRHPLEQITFLCIGTDRSTGDALGPLTGSQLLEHGFPHVSGTMPSPCDADNLEARIAEIPAGQVVIAVDACLGPPASLGYFLTAAEPLRPAQSVGLNLPAVGHYSLAAIVDVNGPRPYRTLQSTPLHRVMVMAKQIALAAAAGFGMETRKAFQD
>NZ_CP009287.1|WP_020426842.1|6229801_6230026_+|DUF1128-domain-containing-protein
MDLSQPTQENVEYMIEGIKSKLKMASAAAMQASAFSVKNYEDILDIYEVAMGSDRLSISQVEALVSELGRLRDK
>NZ_CP009287.1|WP_025709388.1|6230119_6230839_-|pirin-family-protein
MIKVITSAERHTSNREWIHSEFSFSFADYDDPSNAHFGALLAHNDNELSPGQGMHEHPHHDLEIITYVVSGVLKHQDDLGNHAELQGGSVQVMSAGTGINHSETNPSDSANARFLQIWLLPDQPGRQPKWDAKFYPAEHKTNTLLPVASGKGEESALEINENVTIYLSSLERSRALKYQQREDRRTHIYLISGNLEIACSDGVFQLQPGDAARIRKSCDLILKGTGSDSNAEFVLIDLP
>NZ_CP009287.1|WP_025709390.1|6231085_6231922_-|sugar-ABC-transporter-permease
MNRKPEEAAKTIGSYALLILLSFISLFPAIWIVMSSFKTGNSLFSDTLIPHKLTLVHYQELFEQTKYLQWFLNTLKVAALSTLIGTSLLLLASYAISRYRFAGRKSMLTAFLVLQMFPGFMAMIAIYVLLNTLGLLNSHWALVLVYSSGSIITNVFVAKGFFDTIPKSLEDAARIDGASHMKVFLSIMMPLSKPMLTYASLMIFNGCFVDFIFADLILRTEEKRTLAVGLFRMVNQSNSTEFTLFAAGAVLVALPVTLLFIFLQRFLIEGLTAGAMKG
>NZ_CP009287.1|WP_025709392.1|6231918_6233226_-|sugar-ABC-transporter-permease
MPKKTGAAVLSAVIPGLGQIYNRQWLKGLTFLLTGMAWFYFMIHGLTGHLRGLITLGELPSRMVKVGKMTRMVEGDHSIFMMINGLMALLALLLYCGFYLLNIRDAFMVGAARARQEPIRSFGQSLKYMGRRHFAYLVLAIPLTAIVFLTILPLVFSVLLAFTNYADPILPPANLVDWVGFGNFKKMLSLDVWSSTFVGILTWTLCWAVIATVTTYIGGVLVAVLIHQPRVRFKKLWRTLLIVPFAIPNMISLLVMRNMFNNQFGPVNKYLGMIGLNGLPWLTDPFWAKVTVILANMWIGIPVTMILAFGVLTTIPRDLYEAAEVDGAGSAHKFRMITLPMVLFATAPILIMQFAGNINSFNVIYLMTNGEPVNPHYQYAGDTDLLVTWLYKLALNQSQYSFASVIGIIIFLLVATFSIWSYRRTRSYKEEDMIT

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_32

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_32

6276479-6276552

Orphan

Consensus_repeat	Method
AATTAAGTTCCCTTTTTCCACTT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_32

>merge|NZ_CP009287|32|6276479-6276552|CRISPRCasFinder
AATTAAGTTCCCTTTTTCCACTTAAACCCTATAATTGCTGATTTTGGAGAGAAATAAGTTCCCTTTTTCCACTT

>NZ_CP009287|32|27|6276479-6276552|CRISPRCasFinder
AATTAAGTTCCCTTTTTCCACTT	AAACCCTATAATTGCTGATTTTGGAGAG
AAATAAGTTCCCTTTTTCCACTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_042267494.1\|6281969_6284444_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225990
NZ_CP009287.1\|WP_025707307.1\|6290640_6291441_+\|polysaccharide-deacetylase-family-protein	unknown	unknown	gnl\|CDD\|200589
NZ_CP009287.1\|WP_025705013.1\|6277333_6277567_-\|glutaredoxin-family-protein	unknown	unknown	gnl\|CDD\|239274
NZ_CP009287.1\|WP_042267491.1\|6274558_6275719_+\|ROK-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224851
NZ_CP009287.1\|WP_025702902.1\|6269195_6270980_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225519
NZ_CP009287.1\|WP_025705012.1\|6275849_6276044_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025702895.1\|6265264_6266170_-\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_051424714.1\|6276724_6277069_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379228
NZ_CP009287.1\|WP_025705015.1\|6279163_6281119_-\|cadmium-translocating-P-type-ATPase	unknown	unknown	gnl\|CDD\|319849
NZ_CP009287.1\|WP_042267496.1\|6284474_6288506_-\|glycoside-hydrolase-family-2	unknown	unknown	gnl\|CDD\|225789
NZ_CP009287.1\|WP_051424670.1\|6267645_6269199_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|381091
NZ_CP009287.1\|WP_042267497.1\|6291494_6292355_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025702904.1\|6271139_6272636_-\|xylulokinase	unknown	unknown	gnl\|CDD\|198374
NZ_CP009287.1\|WP_025702905.1\|6272826_6274146_-\|xylose-isomerase	unknown	unknown	gnl\|CDD\|235487
NZ_CP009287.1\|WP_025702897.1\|6266232_6267213_-\|sugar-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226666
NZ_CP009287.1\|WP_025707306.1\|6289274_6290141_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP009287.1\|WP_174469038.1\|6263380_6265114_-\|extracellular-solute-binding-protein	unknown	unknown	gnl\|CDD\|270300
NZ_CP009287.1\|WP_025705014.1\|6278016_6278958_-\|thioredoxin-disulfide-reductase	unknown	unknown	gnl\|CDD\|273540
NZ_CP009287.1\|WP_155990488.1\|6288511_6289087_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_167337238.1\|6276124_6276295_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_042267494.1\|6281969_6284444_-\|hypothetical-protein	gnl\|CDD\|225990	COG3459, COG3459, Cellobiose phosphorylase [Carbohydrate transport and metabolism].	0
NZ_CP009287.1\|WP_025707307.1\|6290640_6291441_+\|polysaccharide-deacetylase-family-protein	gnl\|CDD\|200589	cd10967, CE4_GLA_like_6s, Putative catalytic NodB homology domain of gellan lyase and similar proteins. This family is represented by the extracellular polysaccharide-degrading enzyme, gellan lyase (gellanase, EC 4.2.2.-), from Bacillus sp. The enzyme acts on gellan exolytically and releases a tetrasaccharide of glucuronyl-glucosyl-rhamnosyl-glucose with unsaturated glucuronic acid at the nonreducing terminus. The family also includes many uncharacterized prokaryotic polysaccharide deacetylases, which show high sequence similarity to Bacillus sp. gellan lyase. Although their biological functions remain unknown, all members of the family contain a conserved domain with a 6-stranded beta/alpha barrel, which is similar to the catalytic NodB homology domain of rhizobial NodB-like proteins, belonging to the larger carbohydrate esterase 4 (CE4) superfamily.	8.17136e-55
NZ_CP009287.1\|WP_042267491.1\|6274558_6275719_+\|ROK-family-transcriptional-regulator	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	9.9309e-66
NZ_CP009287.1\|WP_025702902.1\|6269195_6270980_-\|sensor-histidine-kinase	gnl\|CDD\|225519	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms].	6.8773e-60
NZ_CP009287.1\|WP_025702895.1\|6265264_6266170_-\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.93599e-61
NZ_CP009287.1\|WP_051424714.1\|6276724_6277069_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379228	pfam13508, Acetyltransf_7, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	9.26631e-08
NZ_CP009287.1\|WP_025705015.1\|6279163_6281119_-\|cadmium-translocating-P-type-ATPase	gnl\|CDD\|319849	cd07551, P-type_ATPase_HM_ZosA_PfeT-like, P-type heavy metal-transporting ATPase, similar to Bacillus subtilis ZosA/PfeT which transports copper, and perhaps zinc under oxidative stress, and perhaps ferrous iron. Bacillus subtilis ZosA/PfeT (previously known as YkvW) transports copper, it may also transport zinc under oxidative stress and may also be involved in ferrous iron efflux. ZosA/PfeT is expressed under the regulation of the peroxide-sensing repressor PerR. It is involved in competence development. Disruption of the zosA/pfeT gene results in low transformability. This subfamily belongs to the P-type ATPases, a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP009287.1\|WP_042267496.1\|6284474_6288506_-\|glycoside-hydrolase-family-2	gnl\|CDD\|225789	COG3250, LacZ, Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].	1.06724e-46
NZ_CP009287.1\|WP_051424670.1\|6267645_6269199_-\|response-regulator-transcription-factor	gnl\|CDD\|381091	cd17536, REC_YesN-like, phosphoacceptor receiver (REC) domain of YesN and related helix-turn-helix containing response regulators. This family is composed of uncharacterized response regulators that contain a REC domain and a AraC family helix-turn-helix (HTH) DNA-binding output domain, including Bacillus subtilis uncharacterized transcriptional regulatory protein YesN and Staphylococcus aureus uncharacterized response regulatory protein SAR0214. YesN is a member of the two-component regulatory system YesM/YesN and SAR0214 is a member of the probable two-component regulatory system SAR0215/SAR0214. Also included in this family is the AlgR-like group of LytTR/AlgR family response, which includes Pseudomonas aeruginosa positive alginate biosynthesis regulatory protein AlgR and Bacillus subtilis sensory transduction protein LytT, among others. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	6.61396e-56
NZ_CP009287.1\|WP_025702904.1\|6271139_6272636_-\|xylulokinase	gnl\|CDD\|198374	cd07808, FGGY_D-XK_EcXK-like, Escherichia coli xylulokinase-like D-xylulose kinases; a subgroup of the FGGY family of carbohydrate kinases. This subgroup is predominantly composed of bacterial D-xylulose kinases (XK, also known as xylulokinase; EC 2.7.1.17), which catalyze the rate-limiting step in the ATP-dependent phosphorylation of D-xylulose to produce D-xylulose 5-phosphate (X5P) and ADP. D-xylulose has been used as a source of carbon and energy by a variety of microorganisms. Some uncharacterized sequences are also included in this subgroup. The prototypical member of this CD is Escherichia coli xylulokinase (EcXK), which exists as a dimer. Each monomer consists of two large domains separated by an open cleft that forms an active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain. The presence of Mg2+ or Mn2+ is required for catalytic activity. Members of this subgroup belong to the FGGY family of carbohydrate kinases.	0
NZ_CP009287.1\|WP_025705013.1\|6277333_6277567_-\|glutaredoxin-family-protein	gnl\|CDD\|239274	cd02976, NrdH, NrdH-redoxin (NrdH) family; NrdH is a small monomeric protein with a conserved redox active CXXC motif within a TRX fold, characterized by a glutaredoxin (GRX)-like sequence and TRX-like activity profile. In vitro, it displays protein disulfide reductase activity that is dependent on TRX reductase, not glutathione (GSH). It is part of the NrdHIEF operon, where NrdEF codes for class Ib ribonucleotide reductase (RNR-Ib), an efficient enzyme at low oxygen levels. Under these conditions when GSH is mostly conjugated to spermidine, NrdH can still function and act as a hydrogen donor for RNR-Ib. It has been suggested that the NrdHEF system may be the oldest RNR reducing system, capable of functioning in a microaerophilic environment, where GSH was not yet available. NrdH from Corynebacterium ammoniagenes can form domain-swapped dimers, although it is unknown if this happens in vivo. Domain-swapped dimerization, which results in the blocking of the TRX reductase binding site, could be a mechanism for regulating the oxidation state of the protein.	8.93047e-22
NZ_CP009287.1\|WP_025702897.1\|6266232_6267213_-\|sugar-ABC-transporter-permease	gnl\|CDD\|226666	COG4209, LplB, ABC-type polysaccharide transport system, permease component [Carbohydrate transport and metabolism].	4.01982e-134
NZ_CP009287.1\|WP_025707306.1\|6289274_6290141_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.64352e-28
NZ_CP009287.1\|WP_174469038.1\|6263380_6265114_-\|extracellular-solute-binding-protein	gnl\|CDD\|270300	cd13582, PBP2_AlgQ_like_3, Periplasmic-binding component of alginate-specific ABC uptake system-like; contains the type 2 periplasmic binding fold. This subgroup includes uncharacterized periplasmic-binding proteins that are closely related to high molecular weight (HMW) alginate bining proteins (AlgQ1 and AlgQ2) found in gram-negative soil bacteria. The HMW alginate uptake system is composed of a novel pit formed on the cell surface and a pit-dependent ATP-binding cassette (ABC) transporter in the inner membrane. The transportation of HMW alginate from the pit to the ABC transporter is mediated by periplasmic HMW alginate-binding proteins (AlgQ1 and AlgQ2). Alginate is an anionic polysaccharide that is made up of alpha-L-mannuronate and its 5'-epimer, alpha-L-guluronate. Alginate is present in the cell walls of brown seaweeds, where it forms a viscous gum by binding water. Alginate is also produced by two bacteria genera Pseudomonas and Azotobacter. AlgQ1 and AlgQ2 belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. However, unlike other bacterial periplasmic-binding proteins that deliver small solutes to ABC transporters, AlgQ1/2 can bind a macromolecule and may have specificity for either sugar or a certain type of polysaccharide.	0
NZ_CP009287.1\|WP_025705014.1\|6278016_6278958_-\|thioredoxin-disulfide-reductase	gnl\|CDD\|273540	TIGR01292, Thioredoxin_reductase, thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport].	5.8685e-158
NZ_CP009287.1\|WP_025702905.1\|6272826_6274146_-\|xylose-isomerase	gnl\|CDD\|235487	PRK05474, PRK05474, xylose isomerase; Provisional.	0

>NZ_CP009287.1|WP_167337238.1|6276124_6276295_-|hypothetical-protein
MLRNSGRNAVVEARTASVLRNSGRNAVVEARTASVLRNNGRNAVVGGGRYFRASSL
>NZ_CP009287.1|WP_025705012.1|6275849_6276044_+|hypothetical-protein
MTYVDTSDISAQMFITVLLLLLIIAPLISLGVLRLFQSRKKSGLLLIAGGIAVYALFQIIMYFT
>NZ_CP009287.1|WP_042267491.1|6274558_6275719_+|ROK-family-transcriptional-regulator
MKVTGDQALVKKINKSIILHTIRMHSPVSRARVSEMTGLNKATVSNLVAELCGQELVTEAGPGESSGGRKPLMLHFNSMAGSVIGIELQVKQLKAVLCDLGGSTLQELDCPLEVHDLPYVLEKMKGIISELIASAPSSPYGIVGIGVGVPGMVDEHGMVLFAPNLGWEMVDLRAILEQSFAVPVTIDNEANAGAQGELNFGAARDVRHLLYISAGSGIGSGIIIGGELYKGARGYAGETGHMTIEAEGKPCSCGSRGCWELYASERTYDNPGLALPARSTTELVRYAREGQEDTLRHFTTIGEYLGIGVTNLINSFNPELIVIGGALSEAEPWLGEPLRRVVAERTLPYHKQQLEITFSRLGSRGTMIGAGFSAVMHFLGNIRVTL
>NZ_CP009287.1|WP_025702905.1|6272826_6274146_-|xylose-isomerase
MAYFESVGKISYEGSRSTNPYAFKFYNPKEIVAGKTMEEHLKFAMAYWHTLTAGGSDPFGAETAVRAWDKLNTLDKAKARAEAAFEFMEKMNLHYYCFHDVDIAPEGASLREFYSNIDTIVDILEQGMKASGKKLLWNTANMFTNPRYMHGAGSTCNADVYAHAAAQVKKGLEVGKRLGADNYVFWGGREGYETLLNTDMSLEQDNIARLFSMAVDYAKEIGFDGQFLIEPKPKEPTKHQYDFDAATTIAFLQKYNLDKHFKLNLEANHATLAGHTFEHELRVARINGMLGSLDANQGDPLLGWDTDEFPASIYDATLTLYEVLKNDGLGKGGINFDSKVRRPSFEPEDLFLAHISGMDIYAKGLKVAAKLLEDRVFENFIDKRYSSFTEGVGADIVSGKATLASLADYALNNENPRKNESGRQELLRATLNQYILAEQ
>NZ_CP009287.1|WP_025702904.1|6271139_6272636_-|xylulokinase
MKYVIGVDLGTSAVKTVLVDPQGKVAFEHSESYPLSRPQPNWSEQNPEDWVEGTLVSLRRLIEVSGIDPAQVDGISFSGQMHGLVLVDRQGKSLRPAILWNDTRTTAQCRKIEKVLGTKLIEIARNRALEGFTLPKILWVQENEPEVLAQAELFLLPKDYVRYRLTGDYAMDYSDAAGTLLLDVGAKTWSAEIAEAFGLPVTLCPKLVECFDLTGTLLPEIAEASGLLPATKVFAGGADNACGALGAGILGEGRTMCSIGTSGVVLSYESNKDLNLEGKVHFFNHGEKDAYYIMGVTLAAGYSLTWFKETFAGDKSFDALLQGVDSIPAGSGGLLFTPYIVGERTPHPDPNIRGSFIGMDAGHTLNHFTRAVLEGITFSLRESIDIVRDSGKEITEVVAIGGGAKNEAWLQMQADIFNASVIKLESEQGPAMGAAMLAAYGSGWFASLSECAEAFIRPAEVYKPNAQQAEVYDGLFHLYQQVYGQTRELNDKLAAYRK
>NZ_CP009287.1|WP_025702902.1|6269195_6270980_-|sensor-histidine-kinase
MFHWFVKLMNDIKIRNKLLLAFLGVTLLPVLLVGGYLTFEMRTMAFDNALEQASINVDRVRKRTEEVIGVSQDISYRLNNDTRLKRLAIRKYESIYEVVKAYQEYTDVREYLRLYTEISNIRLYTDNSSLLNNWELINPSPAIKESEWYQRAQRYEGMIGWEYIEDERDHNKYLSLVRKIELEGSSKTGVLVINVNSNKLTSILNQESFDTMIVDDQNNIIASNRKEREGKTLADISFDTKLLGQGSGSYEAVVDGEPSQIVIDELSPQSSRNALRVISVFSIDSIVKEPNRIIRLALSVITISVVLAFLLIFSFSSLFSRRLLHLSKHINRVGTGDFDTALQIDGKDEIALLARQFNSMVRSIHDLMLEVQVSNEQNSLLQQKQNDIRFKMLASQINPHFLFNALESIRMEAHMKNQQEIARVVRLLGQMMRSSLEVGRSKVTLKQELDMVRCYLEIQQFRYEERLKYHFIVDPAVESLSMPPLIIQPLVENAVIHGLDNTLEGAVVTVVIRYEQDHALFTITDNGAGITQDRLEQIRITLETQEEQEGARIGLRNVHDRLKLSYGEKYGLTIESHPNEGTRISFRIPMEVSK
>NZ_CP009287.1|WP_051424670.1|6267645_6269199_-|response-regulator-transcription-factor
MMIKVLIVDDEPKLREGLRALIPWEQLGFTVVATAANGLQALEKYHIHYPELIVVDIRMPGMDGLELIGELRNEGSTSHVLILSGHADFDYAKRAIGYRIDGYLLKPVDEEEMISLLEELRETIDREDRFSRWNEEEPTRNRESLLRALLQPPAEESGEDDPGKQAAALGLAPGRVEVVLIELLAPAHATEDEERKAIAAVEQHFAGSEDRLLFVLPPYIGLLLKEPLQDGMCREHLMEELAGLICPCGFNFAAAAGGAVPRPEEAAESFNAARDLLRRAFFYRKGVMITADSSGLLFTGSGEADPEQVTDAESRLLLAVETGSRTAIEPLVQAINAELIAAGGGEQQIKDTFVRILSTVLARLEPVYPEIRNNTAKRFPPIGELYQSRYLEDLQEQSVAFLAEIAGQMTSGVKGNEIKKITELIQRRYNENLKLETLSELFSYNSAYLGKMFKNTTGEYFNTYLDKVRIEKAKEFLAQGMKVYEVAEKVGYMNSDYFNAKFRKYVGTSPSSFRKNN
>NZ_CP009287.1|WP_025702897.1|6266232_6267213_-|sugar-ABC-transporter-permease
MKADTVTAPIPPDTRMRNKKPASGGRFWRNFKNQKYLWMMSIPFVIWAFVFSYLPLWGWTMAFQKYKPARGFFEQEWVGFDHFKTLFSDSQFLLALRNTLAMSGMGLVAGFIFPITFAILLNEVRLGIFKRFAQTVSYLPHFVSWVVAAGIVTKMLSGENGLVNDILLGIGLIDTPIQFMAQGHLFWGIVTLSDVWKETGWNAIIYLAAIAGIGPELYEAARVDGASRLRQVWHITLPGIRPTIIVLLIMSIGNLLNIGFEKQFLLQNNLVTDYSQVLDLYSLKYGLGMARYSYGTAINIFNSVISVILLFTINGIFKRTTKESLL
>NZ_CP009287.1|WP_025702895.1|6265264_6266170_-|carbohydrate-ABC-transporter-permease
MGNTALTGKSWADRVFDFIVYLVVLIVIVVTIYPFLNVLAISLNDSVDSVRGGITIYPREFTWDNYLKIFTFSGLITGFKISALRTVAGTLLGLLSASMLAFTISRPDFQGRKFVSTFLAMTMYISGGLIPVYMLVKDLGMMNSFAVYIVPGLVSAFNVFVIRSFIDGLPYALQESAKLDGANDFTIYCRVILPLLKPALATISLFLAVGQWNAWFDTYLYNGSSPHLTTLQYELMKVLQTTTSGNGGDYRSNIASMASNQVSPESLKMAITIVVTVPILLVYPFIQKYFVKGMTLGAVKS
>NZ_CP009287.1|WP_174469038.1|6263380_6265114_-|extracellular-solute-binding-protein
MASNRQIKAKASAITLTSVMLLGLLAGCGGNNGNNAAGNANTGNNANKAEDTSPLTMTYFSADPNPNWTGMQDEVGKVLTEKTGVTLEAEFAVGDPQQKVALIAASGEYPDLISAKTDISKLVDAGAMLDLTDLIEKYAPNIKKVLGEEGMKRSRYSDDDHAIYAIPTYAGVDNKYFDAGGGFELQHRAVKEAGYPPIKTVQDYENVIKAYLEKHPTDENGNKNIGMTLNADDWYMYITVTNPAFITTGSPDDGEYAIDIDTQEVTYHFRRPAEKEYFRWLNHMNDIGLLDPESFVQKYDQYKAKIATGRVIGLIDQDWGYGDGEKALKAEGKLDQGYGHFPVTLSEEYKEASFWPTGFMGGNGIGISVDAKDPVRAIKFLDYLASDEGQVLVNWGIEGKHYNVVDGKRVIPEDVNNRKYNDTTNFQKETGLGNVGSNYALLSAHYGDGVLDPTGSYYTTRFPEQVTAGYNKVEKETLAAYKANTWKDLFPSEDEFKVKPWGAAWNITIPGDSEIVVLDNKLKDITWKRIPEAILSKPADFDKVWDAYMGELNKAGVEKAEDLREELVKKRVKLWNE
>NZ_CP009287.1|WP_051424714.1|6276724_6277069_-|GNAT-family-N-acetyltransferase
MDRYLTVDSRDLLGTFVNGGLAGLVGILHEPGKAVELLHIAVQARLRGRGIGRTMIEEIRKCKGNVLLRAETDLDAAGFYRNSGFVVTSLGEKYPGVERFSCILPVSGQAEYAL
>NZ_CP009287.1|WP_025705013.1|6277333_6277567_-|glutaredoxin-family-protein
MENVIVYTSTNCPHCRQVKSFLSEKGISYEERNIEQNDDYAQQVWDMGMRAVPITVIGDFKIVGMNKTQFDKALASV
>NZ_CP009287.1|WP_025705014.1|6278016_6278958_-|thioredoxin-disulfide-reductase
MYKSIIIGTGPAGLTAAIYLARANLNPLVIEGPQPGGQLTTTTEVENFPGFPDGIMGPELMDNMRKQAERFGAKFVTGWVNSVELGERPFKLNVEGMGALTTDTLILSTGATAKYLGIPGEQDNIGRGVSTCATCDGFFFRGKEIVVVGGGDSALEEAGFLTRFASKVTLVHRREELRASKIMQDRIRDNEKVAWSLNRTPLEVTSGDKGVNGIKVLNNVTGEEEFIEASGVFVAVGHHPNTAFLGGQITTDANGYIVTNPGTSETNIPGVFACGDVQDTRYKQAITAAGSGCMAAIDAEKYIESLEHSAVIL
>NZ_CP009287.1|WP_025705015.1|6279163_6281119_-|cadmium-translocating-P-type-ATPase
MHATSKQLPKSLAREGSTQQPRTPRPRRFDPKAMLSNSEMQAALGSGLLMLVAWALSGWSEIFSILLYIVSYSVGGWIKAKEGVETLVKERDLDVNLLMIAAALGAASIGYWNEGAMLIFIFALSGALESYTMERSKKDISSLMALKPATAVRIEKGGMSEVAIDLLAVGDQLLVRPGEIIPADGTVYRGESAVNQASITGESMPVEKSAGSDVFAGTINGEGPLYIEVTKSAENTLFAKIIKMVEEAETEVPESQRFIKRLESVYARVVVAATIALIALPPFVLDWSWSSTFYKAMVFLVVASPCALVSSIMPAMLSAISKSARKGILFKGGVHLENMAKTSVVAFDKTGTLTEGLPQVTDFIAGEGYDRNELLAVSASIEKLSRHPLAEAIVRKAEEEHLLLHVIEESTSVTGWGIEGLIEGRLWRIGKSNLLDERNEGGDEQWRSLRRQLEKEGKTVSLILDGGDIAGMIGLQDTVRPQAVAAVHKLQELGVKVAMLTGDRAATAEVIAGQTGVDLVFAGLLPEDKVTHIRALREQYGNVVMVGDGVNDAPALATATVGIGMGMKGSGAALEIADVVLMNDNIEEIASTITLARRSQRIVKQNMIFAVTVIATLMLSNFLQGIALPFGVIGHEGSTILVILNGLRLLR
>NZ_CP009287.1|WP_042267494.1|6281969_6284444_-|hypothetical-protein
MMKQPGPPSPAGQSGSEEHKKGAVKTAGRAALAREQQLDQYFTFRDELKEVEFKRHDMPTPWMNYLSNGTFHTMLSHAGGGVAFYKSPQIWRITRYRFFHLPTDRSGPYIYLQDAGTGSYWCPTYEPAFQKPQEWSSSHGLGYTRFEAQEDEVAAKTVYFVGPYENSLIWNLTLTNNSPAVKVLNVYAYAEFGMMEFMRELQWQCYNKHQVSVQYHPKEALVYKYGVENQPKPEETPLVYMMSDAPLHSYDGDREEFIGSYRSESNPAAIEQGGCTGSTLLGGDPCGALQVQVTLQPGETRTVNFFLGTAMDEAEVEQAIEHSREADFVVRSYAALKENWDSYLGAWNCELPDADAQRMLNIWNPYQAQRNFLFSRNISFYATGTFRGVGFRDTAQDVLAVAPFDPEAAKDKVRLLLGQQYQDGHVNHYFFPNEGWDPVTSIHSDDHLWTALAVWDILAETGDAGFLQESLPFYDGGEGTLYEHLKRAVDFTVSRLGPNGFPLMLRSDWNDQLFRVCRQGKGESIWTAMQFGTVLLRMKELAAASGHPEHAAGYEALYEEQKELVNRLGWDGRWFRRAVMDDGRFLGTDEHDEAKIWLNAQTWATLSGMAEPDKALQAMDSVRDILDTELGIKKLHPSITTFPDPADPLTNYNKGTGENGAVFCHANTWAIIAECMLGRGDQAYKYYRQLIPNVAMEQAGIWRYKAEPYVYASNLFGPESDKFGLANVSWLTGTAAWMYIAATQYIMGIKPVMAGLSIDPCIPSEWEGFKVNRRFRGCLYEISVINSSHSCKGVKEIRVDGQRLEGNVVPAYPEKAMVKVEVIL
>NZ_CP009287.1|WP_042267496.1|6284474_6288506_-|glycoside-hydrolase-family-2
MRTSICLNGEWDFMPLYDQPLCRTLPERLVYEARKVQVPSSWRHSYPQPSGTRFGEVAEHGFAPLDVYSYPREWDAAEAGVLHRSFQVPEVMLGQRVVLRFDGMMQKAAVYLDRERIAVWEDGYLPLRLDISSWVKPGEEQHLHVVCGNFDQTVLPSGARKMTGLVGSWFGRIARGIWQDVFLESYPRVTLEDITIRTFFRQGLLEVDALIGTESGSAYAEPLQVFLKVNDRIPGTLPVLEAEAGAEAVPLQARDGRQLCENADNREWQEARFVLSWHDAKLWSPETPNLYELELELRAGGQILDRRTETFGFREFWCEGPQFILNGTPINLRGDSWHFQGAAQQTEGYIRNWYRMCRQAGVNSIRLHAEPYPSQYLRIADEEGMLIVDETAIYGSSKSMDANHPDFIANCRTHVQRLVQRDKNHPSVILWSVQNEMRWVDGRDGYKQHIPGLMKRMRELDSTRPIMVEGDNRLLPKEYTEIESRHYNIDGTIAQWDRSVPLTFGEHGGWWYICPQNSSMYVGLGAYRDTDASAAGLAQKERLFVEYARRQGVSGISTFNFVHYFMRAMPDRDIVLPPADLTAPGPKPGLIPAYSLSLNNGLLPEEYPAYRVNPSFAIMAEAFKPVTMMAAEYNRCFFDDSLIRRSFDVYNDTLAEQAVTIECTVQQGGRVVHTQAFSFRQEPAERRCIRLEWMPDSVDGEGEAVLAAKLFHGGELKHELRLSYRLLSGSCKTAPVALELPAVYIGSNRDYELIKVLVPRLDRIEPEAVEHLPGGILLIVGSKMPDRDGEADRKLRGFVQRGGRLLLLEQLHLSPGRLPLVRREFIRAQAGSYEHPVLQGLGDEDLMFWHEELREEGPLPVIKAAFEKPVTGDFTLLLECSSGDFGDGGDLWSPLLEYRNGAGMFLANQLEIMDHLHRVPQACLLLRNLLRYAGRAVSAAAAPVPAAVWVRSGGPAEALLGKLRLKGTWLDSAAGLSSLSPGLLVVEAGLLNGPGAAEAVRQAASAGSRVLVLPAEPGGQEALARLLGRLVRIAPHGTYHLEADYAHAAVRGISPVDLFGFDKVHLSPRDVVNRELALHRLEVPDADVLCTSVEGTAWKDYFAGQHTAEYSRLALVELNRDKAREPGDFLIRVAAGEGEIICSQLLTEPDSDKSQRLYTRLLGNMGAAFADELLTRDKGDAEWAVEAAMALPCLPYVDFQAMKDYYTDPEFSLNNLGEGLYGWMKKKERRADGTLLIPDPAGCPVFLSCFVHLPVLPGDSRNGIVRTGRLRVKTDNAFEIYLNGEYVAAPEKEIRLSSGINRLIAIVQGGREDFAFGMVFLNSDGTYMNDLEYRLTMDEVEPK
>NZ_CP009287.1|WP_155990488.1|6288511_6289087_-|hypothetical-protein
MELLDVNRLSIFKDGKDLFLYYECGGELHEPEELLADTGELLKVWPGGAQPRWWVPMMDIFHYQQPVSEQHWKRNQGKGTPFGRVAVLKPEQVASYVYHHYQYQEERPGDGDKYGIIGLHENLLFFYTELPATVESVPYSGKLTTNLRPEDWGGVMEPHFIKWGDALPGQEIWKKLTMVLNVAVPAGKKEE
>NZ_CP009287.1|WP_025707306.1|6289274_6290141_+|AraC-family-transcriptional-regulator
MTNKLYARDLGLEPGFTFRIQKCPLTHDYYVHSHDFSELVVILEGSAIHIIEGREYPVSAGQVFFIHSDISHGYKNVQNIQYVNVMFHPDQLLQLPELKLLPGFQALFYLEPFFRKEMFYKGMLSLEPRQLEEVNLLLDRILEEHDRQSDGYRLMIRTYFTALVGTLSRYYRQNGGGTENKALRIGEAITYIEEHFLQPVSLQDLADLAYMSRRQFLRVFTRNYHTTPMDYIIRKRLDYSCTLLRNPELSISQVAMDSGFRDHNYYSRQFKKVFLCTPSEYRIHKAGL
>NZ_CP009287.1|WP_025707307.1|6290640_6291441_+|polysaccharide-deacetylase-family-protein
MKIKLDLFPGGAAKALTLSWDDGRVYDRQLVAILNRHGLKGSFHLNSGFFGRDSYINREEVSSLYEGHEISAHTSTHPFLSMTPREGIADEVLKDREHLEQIAGYPVRGMSYPFGDYNDEVLRLLPALGIEYSRTVQSHGSFTLPDNLLAWHPTCHHRDMLAFGQQFLEEKPKYPRLQLLYVWGHSYEFNDNNNWEELEQFAGMMGGRKDIWYATNIEIADYLAAVRGLRFSASRSIVYNPSAVDVWVTAEDQSRRIPAGATVQLG
>NZ_CP009287.1|WP_042267497.1|6291494_6292355_-|hypothetical-protein
METTAEMPLLNHQRHGYLETTAEMPLLNHQRDGCLETTAEMPLLKRQRDGCLETTAEMPLLKRQRDGCLETTAEMPMLNRQRDGCLETTAEMPLLKRQRHGYLETTAEMPLLNHQRDGCLETTAEMPLLNRQRDGCLETTAEMPLLNHQRDGCLETTAEMPLLNHQRDGCLETTAEMPLLKRQRHGCLETTAEMPMLKRQRHGCLETTAEMPMLKRQRHGCLETTAEMPLLKRRRSLCSCEGAMRDKQYLFAGIKNGNSPQSLPLLNPTQPNPVSPATLLLLIQSV

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_33

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_33

6303812-6303885

Orphan

Consensus_repeat	Method
AAGTGGAAAAAGGATCACTAATT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_33

>merge|NZ_CP009287|33|6303812-6303885|CRISPRCasFinder
AAGTGGAAAAAGGATCACTAATTTGCCCCAGCGCACCAATCTCCACAGCCTAAGTGGAAAAAGGATCACTAATT

>NZ_CP009287|33|28|6303812-6303885|CRISPRCasFinder
AAGTGGAAAAAGGATCACTAATT	TGCCCCAGCGCACCAATCTCCACAGCCT
AAGTGGAAAAAGGATCACTAATT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025705328.1\|6305892_6306969_-\|bifunctional-3-deoxy-7-phosphoheptulonate-synthase/chorismate-mutase	unknown	unknown	gnl\|CDD\|183614
NZ_CP009287.1\|WP_025705330.1\|6302812_6303649_-\|prohibitin-family-protein	unknown	unknown	gnl\|CDD\|259799
NZ_CP009287.1\|WP_025705326.1\|6309928_6310318_-\|response-regulator	unknown	unknown	gnl\|CDD\|381100
NZ_CP009287.1\|WP_025705325.1\|6310465_6311140_-\|DUF2294-family-protein	unknown	unknown	gnl\|CDD\|378372
NZ_CP009287.1\|WP_042267499.1\|6292621_6293746_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|236446
NZ_CP009287.1\|WP_042267505.1\|6315929_6316817_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223673
NZ_CP009287.1\|WP_025705332.1\|6299021_6300125_-\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	unknown	unknown	gnl\|CDD\|273623
NZ_CP009287.1\|WP_025705335.1\|6296525_6297248_-\|GntR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225099
NZ_CP009287.1\|WP_025705333.1\|6298264_6299020_-\|oxo-acid-lyase	unknown	unknown	gnl\|CDD\|188342
NZ_CP009287.1\|WP_156124082.1\|6314294_6315908_-\|FAD-binding-protein	unknown	unknown	gnl\|CDD\|223981
NZ_CP009287.1\|WP_025707439.1\|6294085_6295378_-\|homocysteine-synthase	unknown	unknown	gnl\|CDD\|236201
NZ_CP009287.1\|WP_025705322.1\|6312858_6313920_-\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270273
NZ_CP009287.1\|WP_081758802.1\|6304225_6305761_-\|SulP-family-inorganic-anion-transporter	unknown	unknown	gnl\|CDD\|223732
NZ_CP009287.1\|WP_036704671.1\|6300102_6301203_-\|amidohydrolase/deacetylase-family-metallohydrolase	unknown	unknown	gnl\|CDD\|236423
NZ_CP009287.1\|WP_025705321.1\|6313965_6314298_-\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|224069
NZ_CP009287.1\|WP_025705334.1\|6297258_6298272_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP009287.1\|WP_052415738.1\|6296055_6296313_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025705331.1\|6301939_6302617_-\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_CP009287.1\|WP_025705323.1\|6311355_6311901_+\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|238207
NZ_CP009287.1\|WP_025705327.1\|6307462_6309727_-\|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|236842

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025705330.1\|6302812_6303649_-\|prohibitin-family-protein	gnl\|CDD\|259799	cd03401, SPFH_prohibitin, Prohibitin family; SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily. This model characterizes proteins similar to prohibitin (a lipid raft-associated integral membrane protein). Individual proteins of the SPFH (band 7) domain superfamily may cluster to form membrane microdomains which may in turn recruit multiprotein complexes. These microdomains, in addition to being stable scaffolds, may also be dynamic units with their own regulatory functions. Prohibitin is a mitochondrial inner-membrane protein which may act as a chaperone for the stabilization of mitochondrial proteins. Human prohibitin forms a hetero-oligomeric complex with Bap-37 (prohibitin 2, an SPFH domain carrying homolog). This complex may protect non-assembled membrane proteins against proteolysis by the m-AAA protease. Prohibitin and Bap-37 yeast homologs have been implicated in yeast longevity and in the maintenance of mitochondrial morphology.	1.10496e-67
NZ_CP009287.1\|WP_025705326.1\|6309928_6310318_-\|response-regulator	gnl\|CDD\|381100	cd17548, REC_DivK-like, phosphoacceptor receiver (REC) domain of DivK and similar proteins. Caulobacter crescentus DivK is an essential response regulator that is involved in the complex phosphorelay pathways controlling both cell division and motility. It localizes cell cycle regulators to specific poles of the cell during division. DivK contains a stand-alone REC domain. REC domains function as phosphorylation-mediated switches within response regulators, but some also transfer phosphoryl groups in multistep phosphorelays.	1.38676e-35
NZ_CP009287.1\|WP_025705325.1\|6310465_6311140_-\|DUF2294-family-protein	gnl\|CDD\|378372	pfam10057, DUF2294, Uncharacterized conserved protein (DUF2294). Members of this family of hypothetical bacterial proteins have no known function.	2.76778e-15
NZ_CP009287.1\|WP_042267499.1\|6292621_6293746_-\|hypothetical-protein	gnl\|CDD\|236446	PRK09279, PRK09279, pyruvate phosphate dikinase; Provisional.	0.000488024
NZ_CP009287.1\|WP_042267505.1\|6315929_6316817_-\|ABC-transporter-permease	gnl\|CDD\|223673	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism].	7.98412e-83
NZ_CP009287.1\|WP_025705332.1\|6299021_6300125_-\|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase	gnl\|CDD\|273623	TIGR01437, selA_rel, uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. [Unknown function, Enzymes of unknown specificity].	0
NZ_CP009287.1\|WP_025705328.1\|6305892_6306969_-\|bifunctional-3-deoxy-7-phosphoheptulonate-synthase/chorismate-mutase	gnl\|CDD\|183614	PRK12595, PRK12595, bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed.	0
NZ_CP009287.1\|WP_025705333.1\|6298264_6299020_-\|oxo-acid-lyase	gnl\|CDD\|188342	TIGR03581, EF_0839, conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown. [Hypothetical proteins, Conserved].	2.76598e-120
NZ_CP009287.1\|WP_156124082.1\|6314294_6315908_-\|FAD-binding-protein	gnl\|CDD\|223981	COG1053, SdhA, Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion].	1.65443e-54
NZ_CP009287.1\|WP_025707439.1\|6294085_6295378_-\|homocysteine-synthase	gnl\|CDD\|236201	PRK08248, PRK08248, homocysteine synthase.	0
NZ_CP009287.1\|WP_025705322.1\|6312858_6313920_-\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|270273	cd13555, PBP2_sulfate_ester_like, Sulfate ester binding protein-like, the type 2 periplasmic binding protein fold. This subfamily includes the periplasmic component of putative ABC-type sulfonate transport system similar to SsuA. These domains are found in eubacterial SsuA proteins that serve as initial receptors in the ABC transport of bicarbonate, nitrate, taurine, or a wide range of aliphatic sulfonates, while other closest homologs are involved in thiamine (vitamin B1) biosynthetic pathway and desulfurization (DszB). After binding the ligand, SsuA interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The SsuA proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.63446e-35
NZ_CP009287.1\|WP_081758802.1\|6304225_6305761_-\|SulP-family-inorganic-anion-transporter	gnl\|CDD\|223732	COG0659, SUL1, Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism].	4.13828e-133
NZ_CP009287.1\|WP_036704671.1\|6300102_6301203_-\|amidohydrolase/deacetylase-family-metallohydrolase	gnl\|CDD\|236423	PRK09237, PRK09237, amidohydrolase/deacetylase family metallohydrolase.	1.86057e-174
NZ_CP009287.1\|WP_025705321.1\|6313965_6314298_-\|ferredoxin-family-protein	gnl\|CDD\|224069	COG1146, COG1146, Ferredoxin [Energy production and conversion].	2.75997e-09
NZ_CP009287.1\|WP_025705334.1\|6297258_6298272_-\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	3.49277e-80
NZ_CP009287.1\|WP_025705335.1\|6296525_6297248_-\|GntR-family-transcriptional-regulator	gnl\|CDD\|225099	COG2188, PhnF, Transcriptional regulators [Transcription].	1.73008e-43
NZ_CP009287.1\|WP_025705331.1\|6301939_6302617_-\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	9.84279e-118
NZ_CP009287.1\|WP_025705323.1\|6311355_6311901_+\|glutathione-peroxidase	gnl\|CDD\|238207	cd00340, GSH_Peroxidase, Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.	1.83911e-90
NZ_CP009287.1\|WP_025705327.1\|6307462_6309727_-\|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|236842	PRK11091, PRK11091, aerobic respiration control sensor protein ArcB; Provisional.	1.59163e-91

>NZ_CP009287.1|WP_025705330.1|6302812_6303649_-|prohibitin-family-protein
MEVEVNPKIKQVRPGKIISIVIAVLFIVVIGGNAFTSVEYGHVGLYKTFGKLNDNMLSPGIHFKIPFIQTVIQVNTQVTKAETDTSASSKDLQPVSTHVAVNYSVNKDSAYNLMNNIGGNFDGVIINPAIQEIVKEVTAKYPAEDLITRRDLVAGEISELLTKRLGKYDLVVNDINIVNFKFSDAFNQSIEAKQVAQQQALKAENDLRRVEIEAKQKIAQAQAEAESLRLKKQEVTPELVQLKQIEVQEKALEKWNGVLPSVTGGATPFVDIQSLTQK
>NZ_CP009287.1|WP_025705331.1|6301939_6302617_-|deoxyribose-phosphate-aldolase
MSTHTLSGIIDHTLLKADARKEDIIKLAEEAKTYKFASVCVNPAWVATAYGVLKDTPEVKVCTVIGFPLGVSTPETKAFETTNAISNGAGEVDMVINIGALKDGNNELVKRDIAAVVDAARGKALTKVIIETCLLTEEEKVRACKLAVEAGADFVKTSTGFSTGGATKEDIALMRAAVGPDIGVKASGGVRSAEDALIMVGAGATRIGTSGGVAIAKGEQSQSSY
>NZ_CP009287.1|WP_036704671.1|6300102_6301203_-|amidohydrolase/deacetylase-family-metallohydrolase
MGTENVLRNLQLVDGRTVDIAIRDGIISAITPAGRAEGKTVLDGSGLYVSSGWIDLHVHAVPELHPYGDHIDEIGIQQGVTTLVDAGSCGADRIGAFYAGSLLTATNVLAFLNISRIGLERTDELSQLEWIDRDKAVQAAAAYSDFIVGLKARISQSVVKENGIQPLKLARALSAETKLPLMVHVGSAPPDISEVLELLQPGDVITHYLNGKSNNLFHTDGTPLQGLLEAVSRGVHLDVGHGTASFSFRIAGQAKKAGIPLNTISTDIYRGNRLNGPVYSMSNVLSKFLYLGYSLEEIIHAVTRNAALWLKRPELGEISVGQQANLTLFALQEGRKELTDSEGDVRVADHYIEAKGVFANGSLITC
>NZ_CP009287.1|WP_025705332.1|6299021_6300125_-|DgaE-family-pyridoxal-phosphate-dependent-ammonia-lyase
MDHSLHARYGLKRVINASGRMSILGVSAQTDTVMEAMKRGGQQYVEIADLVDKSGDYIARLLRSEAAVVVNSASSGIALSVAAIVTGGDLRLSLRLHQEPVLKNEIIMLKGHNVQYGAPVETMVFLGGGRVVEAGYANEGRKEHIEQAIGDRTAAILYVKSHHTVQKNMISVEEAWEVAARSGVPLMVDAAAEEDLLKYVQYSDLAIYSGSKAIEGPTSGIVAGKKKYVEWVKVQLHGIGRSMKVGKETTFGLLQALEEYQDKADNSEVEKKALEALQQLTTLHGVSVRIVQDEAGRAIFRGRIQIDASAAGVDAKTVNDRLREGEIAVYTRDYGVKQGYFDIDPRSLQGDDLQVIIDRIHDIVEGK
>NZ_CP009287.1|WP_025705333.1|6298264_6299020_-|oxo-acid-lyase
MSQIQQRLYRNRAALNVLAGSIGNARDVFAAAEGHVLVGVLSKNYATAEEAAAAMTAYGQDIQDAVSIGLGAGDNRQAAVVAEIAKSYPGSHINQVFPAVGATRANLGARDSWINSLVSPCGQAGYVNISTGPVSSGITPQAIVPVEAAIALVRDMGGNALKYFPMQGLKLEEEYRAVAAACGEAGFALEPTGGIDMDNFGPILEIALQAGVPQVIPHVYSSIIDAGTGNTNVQDVRRLLGIMKSLVDQYA
>NZ_CP009287.1|WP_025705334.1|6297258_6298272_-|sugar-kinase
MPRIAAFGEVMMRLQVPGYETLVQSSRLEYSFSGTGVNVTAALARYGHNGAIITTLPETPLGDAAVAYLRKLGIDTTLVSRGGQHLGMYFLENGFGVRPGRVTYTDRLGSSFNTAAAGNYDMAALASRVDVLHLCGITLAMNEEVRKQMKRLAAEVKSAGGKVVFDCNYRPSLWGADGYTLARPHYEELLQLADTVMMNEQDAQFILGIGKGEYDRITQLKHAIPEVVKRFGIGTAAGTHREINDNNTHSLTGYIYHQGRFEFSRKLAFPVFDRIGAGDAFASAVIHGELQKYPPQQTVNMAAAAAMLAHTIVGDTALFTEGEVLRALSEHTLDVER
>NZ_CP009287.1|WP_025705335.1|6296525_6297248_-|GntR-family-transcriptional-regulator
MSLKRKQGPLYQQIQKILKDRILHGIYPLGSIIPSEPQLEKEFGVSKMTVRGAVQELAQEGYVQKRSGIGTIVTRNTSYQKLSKGKRFTELLVEEGHKLEKRLLSSEFIANVAGTEEYNRYGPYCQRIERLYILNGQPYIHLMHILTAAALPDGGTQEMGTDIQSLYDSLEENNIVLENFKDRFFVEPASAEVCLLLELPPGTHVLKRLRNSYDGEGQLIEHSIGSYNTALHHYLVSYDA
>NZ_CP009287.1|WP_052415738.1|6296055_6296313_-|hypothetical-protein
MRGKSAFEFGGYGGYGEMRGKSAFEFGGYRGYGEMRGKSAFEFGGYRGYGEMRGKSAFEFGGYGGYGEMRGKSAFEFGGYGGYGE
>NZ_CP009287.1|WP_025707439.1|6294085_6295378_-|homocysteine-synthase
MSEDRKLSFETLAVHAGQEIDPTTFARAVPLYQTTSYGFRDAEHAANLFGLKEFGNIYTRLMNPTTDVFEQRLAALEGGAGALATASGAAAISFSILNIAGAGDEIVSSASLYGGTYNLFSTTLPKLGIKVHFVDSDNPENFRSAITDKTKALYAETIGNPQGNVLDIEAVAAIAHEHGIPLIVDNTFPSPYLLRPIEFGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKASGKFPGLTEPDPSYHGLVYTEAVGPLAYIIKARVQLLRDLGASISPFNSWLLLQGLETLHLRLERHSQNALKVAQYLEQHEAVEWVSYAGLPSHPSYKLARKYLPKGQGAILTFGIKGGAANGVKLIENVKLFSHLANVGDSKSLIIHPASTTHQQLSDAEQITAGVTPELIRLSIGTEAIDDILYDLEQAIAASQQ
>NZ_CP009287.1|WP_042267499.1|6292621_6293746_-|hypothetical-protein
MPAAASSQEITGSNPKLKKVGAEMKGEREQDQNRNKDERLFKYFTGDRTIGVEMSQSATVASAAAEFIAEGERASIGEPLNRAYFRRPGERPAFLVLRDGREERPVQREDAGAIPAGPCLIRSGEWLLAPEVNGLYASWLFSETEAQEERILQRIYYRLRASAAALLDSADGLWAAVMLPFMPELADQPARLAALQDAQLEALFAAVAERQRLGGDCRVDLLAPYPASAAEFAAQREFIEGVAEQTLGHAYAAACRIGAVILPDVERTAAGEIARIADFLVLDGAAGEAAPEDAAGGFAKAAEEILAAVRSVKPAAALLAAGAPAAYALADLYRIGLSGIFCSAGQRTEALLRAACLTWIARQDHADTAAGGRL
>NZ_CP009287.1|WP_081758802.1|6304225_6305761_-|SulP-family-inorganic-anion-transporter
MSNIGVAPGPDFCEKVLYTLSRHRRNKVLKQLSLKNVWFSNTRSDVLSGMTVAIALIPEAIAFSILAGVSPMVGLYASFCIAIVTAFAGGRPGMISAATGAMALLVGSLVLNHGLEYLFAATVLAGILQIFMGMLKLGRFITFLPQPVMTGFVNALAILIFMAQLTHFSGQGWVMYALVALTLLIIYTVPRFTKAVPSALVAIIAVSVLSIVLHLDVRTVGDMGDITSALPVFHLPELPFTLDTLLIILPYSLSLAVVGLLESLMTATLIDDITGTGSDKNREAKGQGLANIVTGFFGGMAGCAMIGQSMVNMKSGGRTRLSTFVSGIFLLFLILVLGDVVKQIPMGALVGVMFMVSVSTFEWKSLTSLRKVPLSDALVMLVTVVTVVATDNLSIGVLFGVLLSALAFAWKIASIRMTVHTAAVSTQYMVHGQLFFGTTSQFIHQFMVESDPEQIIIDFTHSHIWDQSAAGAIAKVMSKYTALGKKVALTGLNQESAQLVKRIGLSPSGGH
>NZ_CP009287.1|WP_025705328.1|6305892_6306969_-|bifunctional-3-deoxy-7-phosphoheptulonate-synthase/chorismate-mutase
MSNVELEGLRARLDEINGQLLELISERAQVVQEIGAVKEKQGVPKFDPEREKQMLEKLVASNKGPFTSGTIRTLFKQIFSASLDLQSTDHKKSLLVARKNHAEDTVIVLPGGVTVGGLSSLMVAGPCSVESELQTRTVAAALQKAGVKVMRGGAFKPRTSPYDFQGLGMDGLRILREAATEYGLLTISEIVDPRHIEEALDYVDVIQVGARNMHNFELLKAVGEVNKPVLLKRGLSATLDEFVHAAEYIMSRGNMEIMLIERGIRTYEKSTRNTLDISAVPILKQECHLPVLVDVTHSTGRKDILIPCAKAALAAGADGIMVEVHPDPATALSDAAQQLNIDEFNTFFNEVKASGLYR
>NZ_CP009287.1|WP_025705327.1|6307462_6309727_-|PAS-domain-containing-hybrid-sensor-histidine-kinase/response-regulator
MLRQQAQGYSHFEHVCKTGVVGVAFLSVNGQWTSVNPAVTSLLGFTEEQLLSQHLKELVCEDSLESYTAMVRALDAGETPFIEGAIHLSSASGTHVPIQLHMTLVSDPSTGEKLYYLIHTAELAAEEPADEPFSPADKLYRQIVANISDVVYYATSDNICRYCSPSVSEVLGYDSEQLVGRDIRGLIHPDDLAALHFPEAQDFQRVQIRVLHTDGRYLWIEFTLRLIEEGTQYSVLAVGRDITERKIVEQKLQESVERYTSLKKYNHDAIISLDLEGRIINGNEKACQLTGYSIPELAGMNVGRIIGAEHLGEVITYSKEGSPAEVNIDHIWHREGYSVEVLTTIAPIIINKETVGFYIIAKDITDQKKLLIAKEAAEKTNRAKSEFLAMMSHEIRTPMNGVIGMTDLLLEMSEPGSLQREYLDIIRQSGDTLLAIINDVLDFSKIEAGKTILHEEPFMLMPCVDSVLELLQHKADKKGLKIEVSIGPDVPEQLIGDGERLKQILLNLVGNAVKFTYTGGIKVTLRVLARAEGRVTLEFTVADTGIGIPESSRGRLFEPFYQLDHFMHRRHEGTGLGLAITKQLVEMMGGSIALDTTVETGASFVFTVKLREQSGSLPDAASGNEGDEAPAGERSLRILVAEDNEINQIVLRKILEKRGYAVDVAGDGLQVMEMARDRSYDLIFMDVQMPRMNGLEATQAIKETLPPDKQPVIIAVTANALKGDRELCLAAGMDEYISKPLRSEAITNIVGKFF
>NZ_CP009287.1|WP_025705326.1|6309928_6310318_-|response-regulator
MIEYKQTVLYVEDNQLNMALMHHIFKKNLPSVRLLKAETAALGLQIARQKLPDLIILDIGLPDLNGYEAMDELKNDESTRPIPVLAISAFAQRSDIERAQKSGFSGYITKPFQVKTLTEAVEKLLAGIA
>NZ_CP009287.1|WP_025705325.1|6310465_6311140_-|DUF2294-family-protein
MSTTELTSQLSSYAGRLLRERFGKGPESIHASIGKQCIALHIRNFIGPVERFLLNKEEEQAFRYTRELLMKSLLPELSAYLKDTMAIEVGELFYDWGIHNASGIIVALIKNDDVAIDDYAGRDEVHAQINEVSRKVQKEPVHTDSWWLGPRTLIIKREGILIPLEKELIGLGYENTLKTTKRKMEKRYLEDTTTIAPMLGKELADIYVDWDFDKDTSVIAYTFL
>NZ_CP009287.1|WP_025705323.1|6311355_6311901_+|glutathione-peroxidase
MSVYQYSARSIRGKETSLEQYKDKVLLIVNTASKCGFTPQYSDLQKLYEKYQDQGLQILGFPSNQFGEQEPGTNEEVNIFCQINYGVSFPIFEKLDVKGEHQHPLFTYLTEQAGFEGFDTTDSNGRLLQTLLQERDPAALANDEIKWNFTKFLIDRQGNVVKRYESPVDPMDLEPAIQQLL
>NZ_CP009287.1|WP_025705322.1|6312858_6313920_-|ABC-transporter-substrate-binding-protein
MKHTYRESQGGWAKRGRLAFTAGVVMVMLVLQACGNNANSAGNSKSAAGNTAGAAGAEAAGNVPAVLNFGFIGSNKLNLPGGAEGWGLYKGIIQEELRKYGITEVKLTGFPNGPDQTESLISGRLDFGSLGDTPAIIAYASGAKTRLIAQTSARTVGYLIGKKDGPETVKDLQGKTIAIQKGSFMHRYIVGLLQQEGVTGYKLVHMLTPDATAALARGDVDATTNTGVPALKLIDQGYTRLDDASSHPDLLGSSATVVSEEYLKKFPDFPKVWNAAREKALADLKQHEDEYYQFLAEIGDTTPELAKQVSPISDIKDTPFTEEGTKLLEGTKNFLVEEKLAKKDFKISDWQLQ
>NZ_CP009287.1|WP_025705321.1|6313965_6314298_-|ferredoxin-family-protein
MIEVISAARCVECNQCVSVCPTNVFDQVEGGIPVIARQSDCQTCFMCELYCPVDALYVAPDSETVTGVTEEELEQQGLLGGYREKVGWGKGRQPVASHDFMYKLAARAGF
>NZ_CP009287.1|WP_156124082.1|6314294_6315908_-|FAD-binding-protein
MTMNQAVFKGTLNLTADVLVIGGGPAGTWAALTAAAKGARVILADKGYCGSSGATAPSGTGVWYVKPDAGLREEAKASRYTMGGQLAEHRWMDRVLDRTYENMNRLGVSGYPFPLDEQGNQYRRSLQGPEYMRLMRRLVKKAGVTILDHSPVLELLADEHGVAGAAGVQTQSGETWSVQSGAVVIATGGCAFLSKALGCNVLTGDGYLFAAEAGASLSGMEFSNAYAICPTFSSVTKTAYYSYASFYYEDGSVVEGAGSKKGRSVIARNLLSGRQVYAKLDGASEELQPLLRVAQTNFFLPFDRRGINPFKDAFPVTLRLEGTVRGTGGIRITDEACGTGVPGLYAAGDAATRELICGGFTGGGSHNAAWAMSSGSFAGEGAAAYAAGLGRHAADRTPAGLSSSPLVHRQVQPGAAARAAEYTAAVQAEVKPYDINLFRTEQGLSSSLKRLDGLWKEQRSREIQRTPEGVRAREAEAMTATARWMYSSALARTETRGMHKREDYQAIDNGQHHRLISGGLDQVWVRTEEVAKESVLL
>NZ_CP009287.1|WP_042267505.1|6315929_6316817_-|ABC-transporter-permease
MSEGIEAIVKTAKGVREARDYSGTAPVTAYKNVRTSRSPYGKRFLSGFGTGAALPAAGIAVWQLAGSAGLASPEFLPTPLSILSAFAGLTVSGELAHHLGVSMGRAGIGFLIGGILGLLFGVLTGLFRSAEYLLDPSIQVLRLVPHLAIAPLIILWFGFGEVSKVVIIISGSFFPLYINTFMGIRGVDNKLFEVAKVLGFNPVQKLRRLILPAALPGILLGLRLSMAVAWIGLVVAELIGSQSGVGFLINEGKQNSNTEVIFVGILIFAVVGKLIDTLFRIIEHKFLHWRDSYQG

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_34

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_34

6563172-6563245

Orphan

Consensus_repeat	Method
TTAAGTTTCCTTTTTCCACTTAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_34

>merge|NZ_CP009287|34|6563172-6563245|CRISPRCasFinder
TTAAGTTTCCTTTTTCCACTTAATCCCTGCAAATGTTGATTTCTAAGGAGTTTAAGTTTCCTTTTTCCACTTCA

>NZ_CP009287|34|29|6563172-6563245|CRISPRCasFinder
TTAAGTTTCCTTTTTCCACTTAA	TCCCTGCAAATGTTGATTTCTAAGGAGT
TTAAGTTTCCTTTTTCCACTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025707333.1\|6572789_6573683_-\|YitT-family-protein	unknown	unknown	gnl\|CDD\|224203
NZ_CP009287.1\|WP_025706544.1\|6557325_6558240_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|225088
NZ_CP009287.1\|WP_025706540.1\|6561065_6561659_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|374812
NZ_CP009287.1\|WP_052415741.1\|6549434_6550598_+\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP009287.1\|WP_025706543.1\|6558229_6558916_-\|cell-division-ATP-binding-protein-FtsE	unknown	unknown	gnl\|CDD\|225438
NZ_CP009287.1\|WP_025706541.1\|6559249_6560674_+\|VanW-family-protein	unknown	unknown	gnl\|CDD\|377286
NZ_CP009287.1\|WP_025706536.1\|6565238_6566474_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP009287.1\|WP_025708187.1\|6550682_6551345_+\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP009287.1\|WP_155990490.1\|6573787_6574901_-\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP009287.1\|WP_025706535.1\|6566853_6567822_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|234835
NZ_CP009287.1\|WP_025708185.1\|6554334_6555804_-\|S41-family-peptidase	unknown	unknown	gnl\|CDD\|223864
NZ_CP009287.1\|WP_042267542.1\|6555949_6557269_-\|M23-family-metallopeptidase	unknown	unknown	gnl\|CDD\|366703
NZ_CP009287.1\|WP_155990441.1\|6567818_6569009_-\|acetylornithine/succinylornithine-family-transaminase	unknown	unknown	gnl\|CDD\|235056
NZ_CP009287.1\|WP_025707335.1\|6570265_6571498_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl\|CDD\|235441
NZ_CP009287.1\|WP_025707261.1\|6548330_6549266_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009287.1\|WP_025706539.1\|6561926_6562712_+\|esterase	unknown	unknown	gnl\|CDD\|223700
NZ_CP009287.1\|WP_036706022.1\|6571519_6572575_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl\|CDD\|234761
NZ_CP009287.1\|WP_025706537.1\|6563506_6564922_-\|argininosuccinate-lyase	unknown	unknown	gnl\|CDD\|179143
NZ_CP009287.1\|WP_025707331.1\|6575434_6577942_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP009287.1\|WP_025707336.1\|6569414_6570224_-\|acetylglutamate-kinase	unknown	unknown	gnl\|CDD\|234869

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025707333.1\|6572789_6573683_-\|YitT-family-protein	gnl\|CDD\|224203	COG1284, COG1284, Uncharacterized conserved protein [Function unknown].	3.14878e-84
NZ_CP009287.1\|WP_025706544.1\|6557325_6558240_-\|ABC-transporter-permease	gnl\|CDD\|225088	COG2177, FtsX, Cell division protein [Cell division and chromosome partitioning].	8.01066e-87
NZ_CP009287.1\|WP_025706540.1\|6561065_6561659_-\|hypothetical-protein	gnl\|CDD\|374812	pfam16800, Endopep_inhib, IseA DL-endopeptidase inhibitor. This domain functions as a DL-endopeptidase inhibitor.	3.29989e-20
NZ_CP009287.1\|WP_052415741.1\|6549434_6550598_+\|two-component-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.27959e-37
NZ_CP009287.1\|WP_025706543.1\|6558229_6558916_-\|cell-division-ATP-binding-protein-FtsE	gnl\|CDD\|225438	COG2884, FtsE, Predicted ATPase involved in cell division [Cell division and chromosome partitioning].	5.03375e-136
NZ_CP009287.1\|WP_025706541.1\|6559249_6560674_+\|VanW-family-protein	gnl\|CDD\|377286	pfam04294, VanW, VanW like protein. Family members include vancomycin resistance protein W (VanW). Genes encoding members of this family have been found in vancomycin resistance gene clusters vanB and vanG. The function of VanW is unknown.	8.98763e-65
NZ_CP009287.1\|WP_025706536.1\|6565238_6566474_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	0
NZ_CP009287.1\|WP_025708187.1\|6550682_6551345_+\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	4.8405e-74
NZ_CP009287.1\|WP_155990490.1\|6573787_6574901_-\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP009287.1\|WP_025706535.1\|6566853_6567822_-\|ornithine-carbamoyltransferase	gnl\|CDD\|234835	PRK00779, PRK00779, ornithine carbamoyltransferase; Provisional.	0
NZ_CP009287.1\|WP_025708185.1\|6554334_6555804_-\|S41-family-peptidase	gnl\|CDD\|223864	COG0793, Prc, Periplasmic protease [Cell envelope biogenesis, outer membrane].	3.69264e-122
NZ_CP009287.1\|WP_042267542.1\|6555949_6557269_-\|M23-family-metallopeptidase	gnl\|CDD\|366703	pfam01551, Peptidase_M23, Peptidase family M23. Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	7.96739e-47
NZ_CP009287.1\|WP_155990441.1\|6567818_6569009_-\|acetylornithine/succinylornithine-family-transaminase	gnl\|CDD\|235056	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.	0
NZ_CP009287.1\|WP_025707335.1\|6570265_6571498_-\|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl\|CDD\|235441	PRK05388, argJ, bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ.	0
NZ_CP009287.1\|WP_025707261.1\|6548330_6549266_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	6.64178e-106
NZ_CP009287.1\|WP_025706539.1\|6561926_6562712_+\|esterase	gnl\|CDD\|223700	COG0627, COG0627, Predicted esterase [General function prediction only].	7.0668e-41
NZ_CP009287.1\|WP_036706022.1\|6571519_6572575_-\|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl\|CDD\|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	0
NZ_CP009287.1\|WP_025706537.1\|6563506_6564922_-\|argininosuccinate-lyase	gnl\|CDD\|179143	PRK00855, PRK00855, argininosuccinate lyase; Provisional.	0
NZ_CP009287.1\|WP_025707331.1\|6575434_6577942_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP009287.1\|WP_025707336.1\|6569414_6570224_-\|acetylglutamate-kinase	gnl\|CDD\|234869	PRK00942, PRK00942, acetylglutamate kinase; Provisional.	5.63445e-103

>NZ_CP009287.1|WP_025706539.1|6561926_6562712_+|esterase
MALIECRFYSDVLGLSTSMTVILPQQTTTQIGMNNVTKGTLHPTLYLLHGLSDDDSIWLRRTSIERYVAQMGIAVVMPQVHRGFYTDMAEGGRYWTFISEELPALARSFFPLSPKREDTFVAGLSMGGYGAVKLGLRKPEAFAAAASLSGALDMAHHFLNPEDPTKKSLEYERIFGKQSIEDTPDDLLYLLKEVDRSKGPKPLLYQCCGTEDFLYEDNQAFRRACAKTSLSLTYEEGPGDHEWGYWDTKIRDVLAWLPLGK
>NZ_CP009287.1|WP_025706540.1|6561065_6561659_-|hypothetical-protein
MNKKVLLSSLALSLGLVSAGSGAFAASPSFGIEGVKSVAVSAPGKEGPATINNLTVKSVIPLLVHAKKLYTYTSRGGVTYQPETFQYKGTEYRYLSSDIGSKQQLMSYVKRAYTHNAAAFYVQTQFLEQNGRMAQVNTDIGNSMQYDKATARMVSKTAATAVFELSVPDQGTNQSVVVKLKKVSGYWRIDMSPDTLF
>NZ_CP009287.1|WP_025706541.1|6559249_6560674_+|VanW-family-protein
MKNIHAALIALIGLILAGSLVAGGLHLYGSQQTIPSKTLVAGWDVGGMEIGEVRAELATRLQALGAVPLVLKADPDAGLTVTLRQAGMTYEAEKFLQGLNTLTEDGLLERVRARWSFPRSWEFGAHLDLAQLQKSLSPDWEKETFGVPVDAVRRITADDRVVYTPEKTSYEVDWRALELTLQAAVPLSLRNADSLKDKRIILEVPLSIRQPEVTLKTLKEQGIERKISQFSTSLGASGPGRTFNVQAAAEAVNGTLLPPGAVFDYGKAIQKAQADTGFREAPVIVNGRLQPGVGGGICQVSSTLYNAALRSGLEIVERRNHSLPVNYLPKGQDATFSEGNINFRFRNNTGKSLIIHAAVQGRTLTVKLFGTFPKNVTFQVQSRTVELLAPADKYVSDPSLPRGGTRVIQNGKTGYIVETYITRLVDGKAVEKKLLSRDTYYAQKRIIAINRGGMGKSIQPDSRRQPLVEDGVRG
>NZ_CP009287.1|WP_025706543.1|6558229_6558916_-|cell-division-ATP-binding-protein-FtsE
MIEMQDVWKTYPNGTHALQGVSVKIDRNEFVYVVGPSGAGKSTFMKLIYREETPTKGQISVGGFNIGKLKPRKIPYVRRNIGVVFQDFRLLPKLTAYENVAFAMEVIEAPKKVIKKRVPEVLELVGLRSKANREPSQLSGGEQQRIAIARAIVNNPSVIIADEPTGNLDPETSWGIMQLLDEINFRGTTIVMATHNRDIVNKMRKRVLAIENGNIVRDQVRGEYGYEF
>NZ_CP009287.1|WP_025706544.1|6557325_6558240_-|ABC-transporter-permease
MSFKTFLRHVREGFKNVFRNGWMSVASITSIVVSLFVLGVFILLVLNVNAIADKADSQVQINVHLTLNTDQKMRETLENEIGSMPEVSKVEFISKEQGLKEFREDMGPDAAELLEGFDKDNNPLPDKLLVEVIQPTTVPFVAEKIEALNKSHEEKPIYKVNYGKGSVETLFKVTKAVRNIGFIFVAGLALMSMFLISNTIRVTILARRKEIGIMKLVGATNYFIRWPFFIEGALIGLIGSLVTSGALYAGYSSLVSSVQGDPMLGLQLIPFQDIWVLLCGLLVSLGVLIGVWGSTVSIRKFLRV
>NZ_CP009287.1|WP_042267542.1|6555949_6557269_-|M23-family-metallopeptidase
MKKIAAGLAAVLLAVTLFQPSDGYAKKTTVAEIDKQLKQLQQEVQAAKAVQDKAASRNQEAKHYLNKTNLNLQYVLDQISQVKGKMTDISGKIASTEKSLNITATELDEAEARVASREKLLESRVRLMYTDGAVSYLDVLLSSTSFSDFLDRADSLKMIVDQDQDLLVQHKLDKQTVIAKKQELEGQYAQAKQLYTDLESQRSTLKEKEAEKQELIAYYDKEIQETDGLTEEQDAKLVQLASERSALENKKDQIKAEEAARKAAAAKAEAARRAAAAAAAAKARAASSSSSSGSNSDSSSSYSEYAGGNGPFLLPVGSARISSPYGVRTHPVTGEVGKMHTGTDFAVPQGTSIHAADSGTVIVAEWWSGYGYTVVIDHGGGVWTLYGHIREGGIKVSVGDRVSRGQTIAESGATGRVTGPHLHFEVRIDGKPVDPMPYL
>NZ_CP009287.1|WP_025708185.1|6554334_6555804_-|S41-family-peptidase
MLKKSTAAFMIVAALLCGSLLTLGVTGYADIFGRAAGESAAAAVVPPGGLQEKESQKLGTTLSLIEGYYYEKVDRTKLIDGAVNGMMEALGDPYSNYMGKETAEKFEESIEGSFSGIGAEVSSENGKVVIVSPIKGSPAEKAGLKAKDVILSVNGETLEGMELNDAVAKIRGPKGSKATLKIQRTGAAEPLEYVLTRDDVKLETVYAKLEKDGVGVIEVTQFSMNTAERFKEELGKLEKQGMKGLVIDVRNDPGGVLPVVIDMAEQFVPAGKTIVQVEEKGKKPEVSPSKGSSKKYPVVVLMNKGSASASEILAGALQQSAGAKLIGENSFGKGTVQTSFDKQLGDGSLLKITIAKWLTPNGTWIHGKGIKPDIAVAQPDYFSVAPINKSVSLKYNMNNADVKSAQTMLDGLGYKPGRKDGYFDTATKDAVKKFQSASKLQATGIVDAKTAEALELALIKAIQNPVNDNQLNRGIAEVQKEIQASLSKK
>NZ_CP009287.1|WP_025708187.1|6550682_6551345_+|response-regulator-transcription-factor
MIKVVIVDDDSFIRESLKVLVALDPEIEVAGSAGDGREALALLKQLPHADVVLMDIRMPNCDGVEGTKSIKEAFPGISVLMLTTFDDDEYIIEALRNGASGYLLKNIPPDRIIQGIKTVHEGNLLIHPDIARKLAGFLQPAAPPKETMPKTLEAYGLTKAELAVVSLIAEGHTNKEIAAELFLSEGTVKNYITEILSKLGLRDRTQIAILFWKNLREQGN
>NZ_CP009287.1|WP_052415741.1|6549434_6550598_+|two-component-sensor-histidine-kinase
MNREMNVLRYALIIIPALMSIYLYDYADYELFTLHFLLLLLVVALGGRLPGPFRMLACAIELLYTAWLCQHYGDLLIFPAVSALLYYSRLENRPVVFVFFAIHAAALNVALSSAEPRVRVIMNLTFLLSAVLNKLLMRAGRGRVDTLFLYDELRKKHFELEEARSSLLQFTAQIEVAAQAEERVRIARQLHDDIGHRLIRVKMMTEAAIHTLPHSPETGMDMMNQIRDQLAASMDDMRAAVRRINYGSQLEGAYALDRLLEELGRDTGIETSYQIYGIPYPLYPSVRVTLYKNAQEALTNALRHGQATAVWIKVSFSEQEVAMEVGNNGQRPKENPLLKLRGKGGMGLQGMAERVHLVGGTLELQLEPEFAVITRIALHSQSDKLPL
>NZ_CP009287.1|WP_025707261.1|6548330_6549266_-|ABC-transporter-ATP-binding-protein
MAFAVLSDVVKRYDQKLTVDHVNFSIQEGEIFGLLGPNGAGKSTTISMICGLLKADGGDIVIDGLSVLSKPLEVKKRIGLVPQELALYENMTATENVSFFGKLYGLRGKLLKERVEEALAFTGLSDRAKDKPSTFSGGMKRRLNIACAIMHRPKLIIMDEPTVGIDPQSRNHILESVKALNKLGSTVIYTSHYMEEVAAICDRVAIMDKGHIIACGTEHELRERVAHEEKIVVKAAHITPALIQELGQHPRISRVELNEDTVELYLPSSQSELQDILFIFAKHEGVIASLNIEEPDLETLFLSLTGRTLRD
>NZ_CP009287.1|WP_025706537.1|6563506_6564922_-|argininosuccinate-lyase
MSKLWGGRFTKGTNKLVEEYTASIGFDKLLAEEDVQGSLAHVTMLGKCGILPQEDVETIKNGLNKVLDKVRAGEIVFSVADEDIHMNIEKNLIEEIGPVGGKLHTGRSRNDQVATDMHLYLRNRVVELVALLHELQEALIGQAKDNVETIVPGYTHLQRAQPILFAHHLLAYVSMFRRDAERLTDSYKRINVLPLGAGALAGTTFPIDRHFVAEQLGFDSVYENSLDAVSDRDFIVEFLSNAALVMTHLSRLSEELVLWSSTEFSFVELDDAFCTGSSIMPQKKNPDVPELVRGKTGRVYGNLIGLLTVLKSLPLAYNKDMQEDKEGMFDTVATLTGALQLFAPMISTMKVNKSRMREAVNTDFSNATDIADFLVGKGLPFRQAHEVIGKTVLYCINEGKFLLDLTLEEFKQFSPLFDDQIYAVLQPEAVVNARNVYGGTATVQVKAAIERAEAALNNASEWIAQHVNTIR
>NZ_CP009287.1|WP_025706536.1|6565238_6566474_-|argininosuccinate-synthase
MPKEKIVLAYSGGLDTSVILKWLKETYDAEIIAFTADIGQKEELDGLEEKALATGASKVYIDDLRDEFASDFIYPMFQSGALYEGQYLLGTSIARPLIAKRMVDIAIAEGATAIAHGATGKGNDQVRFELNAAALSPSIKVIAPWRLEEFRSQFPGRAEMIAYAETNGIPVQASAAKPYSMDRNLLHISYESGVLEDPWFDPSAPENKGMFLLSSAPEDAPDQPEYLELEFLKGDCVALNGEPLSPLQVMEKLNELGGKHGIGRVDMVENRFVGMKSRGVYETPGGTILFTAHRKMESITMDREVMNLRDSLITRYSTLVYNGFWFAPERLALQALVKESQKNVTGTVRVKLYKGNIIGAGVKSPVSLYNPDIATMEADPTQAYDQGDATGFIRLNALRLKVSAGVAESNQ
>NZ_CP009287.1|WP_025706535.1|6566853_6567822_-|ornithine-carbamoyltransferase
MSQEVKSGAQHIAQQLKGRDLLELNDYSPEEITYLIDLAIELKRKQKSGEVYQPLKGKTIGLIFEKSSTRTRVSFEVGMYQLGGHALFLSKNDIQLGRGETVGDTAQVMSRYLDGIMIRTFGHDKVEDLARYASVPVINGLSDLAHPCQVLADYQTVYEHKGKLKGLKLAYIGDGNNMAHSLLIGGAKLGVHVSIAGPEGYEPDEAVVAEAREIAKETGSVIVVTRSPQEAVQDADVIYTDVWASMGFEAEQLAREAAFKDYQVNEELVKGAKSDYLFLHCLPAHREEEVSTGVIDGPNSVIFDQAENRLHAQKALMAALMG
>NZ_CP009287.1|WP_155990441.1|6567818_6569009_-|acetylornithine/succinylornithine-family-transaminase
MGAVFPSYARYDISLVKGKGSWVWDDQGNKYLDFMCGLAVTSLGHAPEKVGAKLKEQIDTLWHVSNLFHIPGQDRVAALLTANSCADQVFFCNSGAEANEAAIKLARRYHQKVKGTGRYEVITFEQSFHGRTLATLTATGQQKVKEGFLPLPAGFKTVPLHDLPALKAAISGNTAAVMLEMVLAEGGVLEVQQEFLDAVVALCKEHGLLLIVDEVQTGMGRTGKLFAHQHYGIEPDIFTLAKGIASGFPAGVMLGKGYLREAFSPGSHATTFGGTPLAAAVMEATIETMLEDNLAQRAADMGEYLKGLLGDKLADTPFVKEIRGKGLLIGIECAAPVGEIVLAGQKRGLLFVQAGPNVIRLLPNLYVSADEIHQAVDILSELIHTYANNGKWEAGS
>NZ_CP009287.1|WP_025707336.1|6569414_6570224_-|acetylglutamate-kinase
MTVENHKGGGLFVMKCGGSTLAALPDSFFDDLRELQRSGAQPVIVHGGGPAISGNLEKLGIESSFVNGLRVTTEEVLDVVEMTLAGSINKAIVRRIQGSGGQALGLSGVDGRLITARLVANSSEVGLVGEVTGVNAEIVRGVLAMGYIPVIAPIGVDAGGQRYNINADTAAGAVASFTGSPQMIVVTDVPGIMRTLDGRKTVLPSVTVGQIEDLIENGEIYGGMIPKVRAAIDCIQGNVSEVVIVDGKEPRVLSRVLQGEELGTRIIRS
>NZ_CP009287.1|WP_025707335.1|6570265_6571498_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MSEKQVFTVIEGGSVTTPKGFTAGGLHCGLKKTERNDLAAILCEVPATAAAVYTTNVFQAAPLKVTRESLANGTLQAVIVNSGNANACTGEQGEADAYEMRAAAARELGVNELDVAVASTGVIGELLKMDRVRSGIAGLPEKLDGGAAGAEAFCQAILTTDLVKKECCVKVKAGEVEVTIAGAAKGSGMIHPNMATMLGFMTTDAVIDGGDLLGLLRTATNTTFNMITVDGDTSTNDMLVTMASGLAGNEKLTRLHADWEAFAAAFTHVCKSLAMAIARDGEGATKLIEVQIDGAVHDEAAAAIAKTVIGSSLVKSAIFGADANWGRIIAAVGRAGVPVSPERVDISLGGIEVLRHSRPVAFDEEKALHYLQKSDTVRITVALADGEGKATAWGCDLTYDYVRINAAYRT
>NZ_CP009287.1|WP_036706022.1|6571519_6572575_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MTVTGKLRAAIVGSTGYGGVELIRLLQGHPDIEITSVISSSSAGAPIEEGFPHLTGIVQRNLDGVDAAEIAGRADVVFTATPSGVSAKLVPQLLEAGLKVVDLSGDFRLKDGAEYEQWYKHPAPPEAYLQQAVYGLCEVFGERAAGVDFVSNPGCYPTATLLGLVPALQAGWIKPDSIIIDAKSGVSGAGRGTGLTVHYAEINENFKAYKVNKHQHIPEIEQTLTEIAGEKVTVTFTTHLVPMTRGIMSTMYAGMSGGYSEQDFVDLYRKYYAGRPYVRIRNAGVLPATKEVSGSNYCDIGFATDARTGRVTIVSVIDNIVKGAAGQAIQNLNLMMGWEETRGLGYTPVYP
>NZ_CP009287.1|WP_025707333.1|6572789_6573683_-|YitT-family-protein
MQKINSRNKPPLIPLNGPLRHTVDILLILLGSLITGLAFNLFFLPNRIASGGVSGLSVLAEAWLGAEPAFTQWALNIPLFILGVVFLGKQYGLRSLLGSFVLPLFIFLTKDGPVPTTNPLLASIYGGIGVGLGLGLVFRGRGSTGGLTILAQIIQKITGFSFSLSVVLLDGTVITLAAFVLGMEQAMYALIGLFVTGKVINALEVGFSTTKVAYIISDQTEEISQAILNDLDRGLTKLNAQGGYTGDSRTVLMVVVGQNEITRLKAIVRSVDPGAFVIITEAHEVLGEGFKREVQSP
>NZ_CP009287.1|WP_155990490.1|6573787_6574901_-|peptide-chain-release-factor-2
MIDANVKQDLREIGKKLTDLRGSLDLDLKQEMISNFEEKMAAPGFWDDPEKAQGVIAEMNAVKSSVDQYEKLQQDYDDAAMMTELADEEGDAELAAEVAETIRSISGKVDEFELQLLLNQPYDKLNAILELHPGAGGTESQDWGQMLLRMYTRWAEKRGFKVEVLDYLPGDEAGIKSVTLLIKGYNVYGYLKAEKGVHRLVRISPFDASGRRHTSFVSCDVVPEIADDVEVDIRTEDLKIDTYRASGAGGQHINTTDSAVRITHLPTGVVVTCQNERSQIKNREQAMKMLRSKLYERKLVEQQQQLDEIRGEQSDIAWGSQIRSYVFHPYSMVKDHRTSVETGNVGAVMDGDLDAFIDGYLRSQIKTEAE
>NZ_CP009287.1|WP_025707331.1|6575434_6577942_-|preprotein-translocase-subunit-SecA
MLGLVKKIFGDTNERDVKRLMKTVDVINGLEPDFVSLSDEELKAKTAEFRARIEKGETLEELLPEAFATVREASKRTLGMRHFDVQLVGGMALHEGRISEMKTGEGKTLVGTLPVYLNALLGKGVHVVTVNDYLAQRDSAQMGQIYNFLGMTVGVNLNGMDHADKQEAYACDITYGTNNEFGFDYLRDNMVLYKEQMVQRPLYFCIIDEVDSILIDEARTPLIISGQAEKSTELYYAADRFVKRLTAEEDYTVDIKVKSVALTEKGVATAERAFGVENLYDHANVTLNHHIVQALKANVIMRRDVDYVVNEDEVVIVDEFTGRLMAGRRYSDGLHQAIEAKEEIQVQNESMTLATITFQNYFRMYRKLGGMTGTAKTEEEEFKKIYGLEVLQVPTNKPNQRVDMPDVVYKSENGKFNAVVEEIVERHKKNQPVLVGTVSIENSERVSEMLKRKGVRHQVLNAKHHAAEAEIISHAGQPGTVTIATNMAGRGTDIVLGEGVTDLGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSTQFYLSLGDELMKRFGADNVLNMMDRLGFEEDQPIESRMITRAVESAQKRVEGNNFDIRKVVLQYDDVMNQQREIIYKQRREILESDNIKDIVIEMIKPVIDRIVHAHCSDDIPENWELQEVADYVNSKLLEEGQLTRDDLWGKEVEEIIEYIFNLVLEKYAAREERLGSELVREFEKVIVLRSVDSKWMDHIDAMDQLRQGIHLRAYGGTDPLREYQFEGFEMFNAMTATIQEEVATYIMKAHIETNQERQSVVEENKISTNGEPAEKQPVHVQAAIGRNDPCPCGSGKKYKNCHGQNA

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_35

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_35

6701141-6701215

Unclear

Consensus_repeat	Method
TAAGTGGAAAAAGTATCACTAATC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009287_35

>merge|NZ_CP009287|35|6701141-6701215|CRISPRCasFinder
TAAGTGGAAAAAGTATCACTAATCCAAGTCTCTAGGCTCCTCCACCAATATTAAGTGGAAAAAGTATCACTAATC

>NZ_CP009287|35|30|6701141-6701215|CRISPRCasFinder
TAAGTGGAAAAAGTATCACTAATC	CAAGTCTCTAGGCTCCTCCACCAATAT
TAAGTGGAAAAAGTATCACTAATC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025703134.1\|6712951_6713290_-\|DUF3243-domain-containing-protein	unknown	unknown	gnl\|CDD\|378681
NZ_CP009287.1\|WP_025705384.1\|6693026_6694379_+\|sugar-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270303
NZ_CP009287.1\|WP_156124083.1\|6694406_6695975_+\|family-43-glycosylhydrolase	unknown	unknown	gnl\|CDD\|350115
NZ_CP009287.1\|WP_167337242.1\|6697663_6697921_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_081954777.1\|6704049_6706155_-\|molybdopterin-oxidoreductase-family-protein	unknown	unknown	gnl\|CDD\|239167
NZ_CP009287.1\|WP_025703135.1\|6711732_6712752_-\|LLM-class-flavin-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|274646
NZ_CP009287.1\|WP_042267578.1\|6698151_6699852_-\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	unknown	unknown	gnl\|CDD\|235424
NZ_CP009287.1\|WP_025705385.1\|6692126_6692966_+\|carbohydrate-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223472
NZ_CP009287.1\|WP_025708035.1\|6700083_6700329_+\|DUF2164-domain-containing-protein	unknown	unknown	gnl\|CDD\|378315
NZ_CP009287.1\|WP_025707348.1\|6706433_6707261_-\|formate/nitrite-transporter-family-protein	unknown	unknown	gnl\|CDD\|376497
NZ_CP009287.1\|WP_025708033.1\|6701488_6702133_-\|MOSC-domain-containing-protein	unknown	unknown	gnl\|CDD\|225167
NZ_CP009287.1\|WP_167337215.1\|6695941_6696391_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708032.1\|6702113_6702644_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009287.1\|WP_042267576.1\|6697895_6698090_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025708034.1\|6700357_6700906_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|224584
NZ_CP009287.1\|WP_025703138.1\|6711142_6711619_-\|glutathione-peroxidase	unknown	unknown	gnl\|CDD\|223463
NZ_CP009287.1\|WP_025706655.1\|6696305_6697538_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340893
NZ_CP009287.1\|WP_025708031.1\|6702719_6703931_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340887
NZ_CP009287.1\|WP_025707347.1\|6707525_6708890_-\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|181958
NZ_CP009287.1\|WP_042267583.1\|6709208_6710849_-\|formate--tetrahydrofolate-ligase	unknown	unknown	gnl\|CDD\|376511

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025703134.1\|6712951_6713290_-\|DUF3243-domain-containing-protein	gnl\|CDD\|378681	pfam11588, DUF3243, Protein of unknown function (DUF3243). This family of proteins with unknown function appears to be restricted to Firmicutes.	3.74225e-33
NZ_CP009287.1\|WP_025705384.1\|6693026_6694379_+\|sugar-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270303	cd13585, PBP2_TMBP_like, The periplasmic-binding component of ABC transport systems specific for trehalose/maltose and similar oligosaccharides; possess type 2 periplasmic binding fold. This family includes the periplasmic trehalose/maltose-binding component of an ABC transport system and related proteins from archaea and bacteria. Members of this group belong to the type 2 periplasmic-binding fold superfamily. PBP2 is comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. The majority of PBP2 proteins function in the uptake of small soluble substrates in eubacteria and archaea. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.65039e-65
NZ_CP009287.1\|WP_156124083.1\|6694406_6695975_+\|family-43-glycosylhydrolase	gnl\|CDD\|350115	cd09001, GH43_FsAxh1-like, Glycosyl hydrolase family 43 such as Fibrobacter succinogenes subsp. succinogenes S85 arabinoxylan alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been annotated as having beta-1,4-xylosidase (beta-D-xylosidase; xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. This subfamily includes the characterized Clostridium stercorarium F-9 beta-xylosidase Xyl43B. It also includes Humicola insolens AXHd3 (HiAXHd3), a GH43 arabinofuranosidase (EC 3.2.1.55) that hydrolyzes O3-linked arabinose of doubly substituted xylans, a feature of the polysaccharide that is recalcitrant to degradation. It possesses an additional C-terminal beta-sandwich domain such that the interface between the domains comprises a xylan binding cleft that houses the active site pocket. The HiAXHd3 active site is tuned to hydrolyze arabinofuranosyl or xylosyl linkages, and the topology of the distal regions of the substrate binding surface confers specificity. It also includes Fibrobacter succinogenes subsp. succinogenes S85 arabinoxylan alpha-L-arabinofuranosidase (Axh1;Fisuc_1769;FSU_2269), Paenibacillus sp. E18 alpha-L-arabinofuranosidase (Abf43A), Bifidobacterium adolescentis ATCC 15703 double substituted xylan alpha-1,3-L-specific arabinofuranosidase d3 (AXHd3;AXH-d3;BaAXH-d3;BAD_0301;E-AFAM2), and Chrysosporium lucknowense C1 arabinoxylan hydrolase / double substituted xylan alpha-1,3-L-arabinofuranosidase (Abn7;AXHd). A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.	9.3665e-147
NZ_CP009287.1\|WP_025708032.1\|6702113_6702644_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	1.24815e-21
NZ_CP009287.1\|WP_081954777.1\|6704049_6706155_-\|molybdopterin-oxidoreductase-family-protein	gnl\|CDD\|239167	cd02766, MopB_3, The MopB_3 CD includes a group of related uncharacterized bacterial and archaeal molybdopterin-binding oxidoreductase-like domains with a putative N-terminal iron-sulfur [4Fe-4S] cluster binding site and molybdopterin cofactor binding site. These members belong to the molybdopterin_binding (MopB) superfamily of proteins.	0
NZ_CP009287.1\|WP_025703135.1\|6711732_6712752_-\|LLM-class-flavin-dependent-oxidoreductase	gnl\|CDD\|274646	TIGR03558, oxido_grp_1, luciferase family oxidoreductase, group 1. The Pfam domain family pfam00296 is named for luciferase-like monooxygenases, but the family also contains several coenzyme F420-dependent enzymes. This protein family represents a well-resolved clade within family pfam00296 and shows no restriction to coenzyme F420-positive species, unlike some other clades within pfam00296. [Unknown function, Enzymes of unknown specificity].	1.98372e-150
NZ_CP009287.1\|WP_042267578.1\|6698151_6699852_-\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
NZ_CP009287.1\|WP_025705385.1\|6692126_6692966_+\|carbohydrate-ABC-transporter-permease	gnl\|CDD\|223472	COG0395, UgpE, ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism].	5.88465e-76
NZ_CP009287.1\|WP_025708035.1\|6700083_6700329_+\|DUF2164-domain-containing-protein	gnl\|CDD\|378315	pfam09932, DUF2164, Uncharacterized conserved protein (DUF2164). This domain, found in various hypothetical prokaryotic proteins, has no known function.	1.34334e-24
NZ_CP009287.1\|WP_025708033.1\|6701488_6702133_-\|MOSC-domain-containing-protein	gnl\|CDD\|225167	COG2258, COG2258, Uncharacterized protein conserved in bacteria [Function unknown].	3.53109e-67
NZ_CP009287.1\|WP_025707348.1\|6706433_6707261_-\|formate/nitrite-transporter-family-protein	gnl\|CDD\|376497	pfam01226, Form_Nir_trans, Formate/nitrite transporter.	2.65571e-86
NZ_CP009287.1\|WP_025708034.1\|6700357_6700906_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|224584	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis].	2.65961e-30
NZ_CP009287.1\|WP_025703138.1\|6711142_6711619_-\|glutathione-peroxidase	gnl\|CDD\|223463	COG0386, BtuE, Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones].	6.10143e-88
NZ_CP009287.1\|WP_025706655.1\|6696305_6697538_+\|MFS-transporter	gnl\|CDD\|340893	cd17335, MFS_MFSD6, Major facilitator superfamily domain-containing protein 6. Human Major facilitator superfamily domain-containing protein 6 (MFSD6) is also called macrophage MHC class I receptor 2 homolog (MMR2). It has been postulated as a possible receptor for human leukocyte antigen (HLA)-B62. MFSD6 is conserved through evolution and appeared before bilateral animals. It belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.79292e-54
NZ_CP009287.1\|WP_025708031.1\|6702719_6703931_-\|MFS-transporter	gnl\|CDD\|340887	cd17329, MFS_MdtH_MDR_like, Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	9.82765e-40
NZ_CP009287.1\|WP_025707347.1\|6707525_6708890_-\|FAD-dependent-oxidoreductase	gnl\|CDD\|181958	PRK09564, PRK09564, coenzyme A disulfide reductase; Reviewed.	1.05389e-136
NZ_CP009287.1\|WP_042267583.1\|6709208_6710849_-\|formate--tetrahydrofolate-ligase	gnl\|CDD\|376511	pfam01268, FTHFS, Formate--tetrahydrofolate ligase.	0

>NZ_CP009287.1|WP_025708034.1|6700357_6700906_+|GNAT-family-N-acetyltransferase
MFNYVIDEELTLKLLMPEHARHMFALVERSRARLRQWLPWVDGVTEQAHLETFIKNSVKQGSENGGFSAGLWVREELAGIIGYHEIDWHNRSVGIGYWLGEGYEGKGYMTSACRVFVDYALLEMDLNRVEIRCATGNRTSRAIPERLGFVFEGVIRQAEKLPSGYMNHAVYGLLRSEWKLLG
>NZ_CP009287.1|WP_025708035.1|6700083_6700329_+|DUF2164-domain-containing-protein
MKPIKLPKEQRDTITENIRAYFEAERGESIGHLAADSLLEFFLQELGPAIYNGALGDCRTLVGQRMQSLEDDIYALEWKKR
>NZ_CP009287.1|WP_042267578.1|6698151_6699852_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein
MENRGTPSNFIKNVITEDLSSGKVKEVVTRFPPEPNGYLHIGHAKAIWINFTLADEFGGRTHLRFDDTNPLKEDTEYVNSIQEDVKWLGYEWDELRFASDYFGEMYERAELLIQKGKAYVDDLTAEQIREYRGTLTEPGVNSPYRERTIEENLDLFRRMRAGEFKDGEKVLRAKIDMSSPNINLRDPVIYRISHSHHHNTGDAWCIYPMYTFAHPLEDAIEHVTHSLCSLEFEDQRPFYDWVVAECDMPASPHQYEFGRLNLAQTVTSKRKLKLLVDEGHVDGWDDPRMPTISGLRRRGYTPEAIRSFVHETGISKSQGLVDLQMLEHFIREDLKLTVPRTMSVLRPLKVVITNYPEGQTEWFEIENNVENEAMGTRQIPFSREIYIERDDFMENPPNKYFRLFPGNEVRLKNAYFIKCTDFIKDENGEVVELHCTYDPETKSGSGFTGRKVKGTLHWVDAGQAVPAEFRLYEPLISAEEADQEAEVEGMEPTTDKPEPSFLDQLNPKSIEILHGFVEPGLKDSVPQDKFQFFRHGYFNVDSRYSTPGHPVFNLIVSLKSSFQPAK
>NZ_CP009287.1|WP_042267576.1|6697895_6698090_-|hypothetical-protein
MAWDESKVKIPLNRPAEAGSGEIKGKNTFEWPAEAGSGEIKGKNTFEWPAEAGSGEIKGKNTFE
>NZ_CP009287.1|WP_167337242.1|6697663_6697921_+|hypothetical-protein
MGPLPRASANNLPRRAASRECRGRGSLIKGIFTFDFATSGRGGPFKGIFTFDFATSGLGGPFKGIFTLDFATSGFGGPIQRYFYL
>NZ_CP009287.1|WP_025706655.1|6696305_6697538_+|MFS-transporter
MRENLDKQFSFTSLKWFNFFLYGTVVLFTSFFPLYLQEVGMNKLEIGSLMSVGALVSIIANPFWGIWTDRYQNIRRIVLLMLTGTLVLSQVVFQANTYEMIYASILFFYFFQGPLFAESNTMILSYIDGTKHRFSSFRLWGSLGWAFTAILAGPVIEWAGVSVLSYLFAALLCAAMISLIVLPRLDHSIGIAPLPFKGFRQIFYNAFFLSFIFFGILVSIPNTMNNTFVSLYITELGGSKTMIGLAVFLSSILEVAVLVLCDRYLKRSIPVLLGWLALVSALFVLRWLLMADATTPLQVAFIQILHCVTFGGFFYVGTRLTMLLVPKPYRSSGQALYTLTWSGISGIMGGVLGGWLYQYLGAQSMYQSGVFLSLIGTLGFGAMWLLVSRGGYHPQDGHPEEEWNEIELNR
>NZ_CP009287.1|WP_167337215.1|6695941_6696391_-|hypothetical-protein
MKRTTVPYKKKLNHFNEVKENCLSRFSRKIGHSFPAKCLACIHGSIEEAASITVTLVEKGYKPTFDQISNCLIISAAGIAFCCLKGICPVRECIRRSCPYLAAQSALKDSSAEILFHWRIAALLLMLSRASLWSYVGCSYEIVYLSKSA
>NZ_CP009287.1|WP_156124083.1|6694406_6695975_+|family-43-glycosylhydrolase
MNTPAVTDSGLWIPDQENGTYINPIIYADYSDPDVIRVGEDFFMTASSFTHIPGLPILHSRDLVNWRIVNHALPRLELPGYDKVQHGKGVWAPSLRYHEGQFWIFYATPDEGIFMTKADDPFGAWEPPHLLKAAKGWIDPCPFWDEDGQAYLVHAYAHSRSGLKHILNLCRMSPDGTTLLDDGTIIVDGTVKHPTLEGPKMYKRNGYYYIFAPAGGVPTGWQAVFRSKSIYGPYEDKIVLQQGETPVNGPHQGGWVELASGESWFIHFQDKGAYGRITHLQPMEWREDWPVMGRLAPDREVGEPVELWKKPDAAAGDVCIPQTSDDFCGTALGLQWQWQANPAPGWHRLIPGGGLRLNAAPLPRDCRTLYDTPQLLMQKLAAPAFTATVKITPRFSSCGERAGLVVLGHRAFCIALSLDPAGDLWLARYESGTADDPGRKDLDIKISAIRIQTESLYLRASFEEANGCRFSFSPEGSDFTEFGSPFRLEEGQWVGAKVGLFALSLTPGEPQGYADFERYTIS
>NZ_CP009287.1|WP_025705384.1|6693026_6694379_+|sugar-ABC-transporter-substrate-binding-protein
MTRKLRGTALVAASLLLVLSGCGSDKTSNSNASAADGSANTSGKGEPATISFWAAAVTTERNAFFEKIIKQFEEENPDIKVDYLGVPGDLSAYEQKVNVAISAEQAPDIMNDFKADLLSRDVLEPLDTYFDGWADKDLISSELIASNRKLDTKEGKLYALPYSSQTWNLWLRPDWFKEAGLQLPDTWDQFFEDIAKLTDKSKDRYGLSIRGGAGSANTLEMLMYSYSGITDYFTPEGKSTINDPLHAEFLEKYLGAYNVYSPEDDLNKGWTELAATFQSNKAAIVVHNLGSASSHEKAFGGDYTKFEAVPFPKSVKGYREHPGLAPLGLTMSKTAKNKEAVWKFMTFYLSHDINSQYAKLYGEIPANKDAASDAWVQDIPYMKSASDLLNSADTHFADNPYYLPGYSNIQKKAESMIQKVMAKKMTGPEMLNEWAKLLEAEKQSYDQAQK
>NZ_CP009287.1|WP_025705385.1|6692126_6692966_+|carbohydrate-ABC-transporter-permease
MSSKTARRIGSKLLFYIPLALTLILVLVPFLWAISTSLKRESDIMSPVIHYLPQPITFANYISVWNENSFSQYFLNSVLVSVMSVVVITLLSVMNGYAMSRFKFKGKSAFMLILLATQMMPVILFVIPLFLIFKNLGLINTPYSLVLFYIVLQVPFNTILMQGFISSTPKEIDEAGMVDGAGRFRIIMTIIAPIVLPGIVATSAFAFIGVWNEFLVAFSFITTPDRFTIPIGLKFMIGEFSVQYASLAAGSIIGLIPPVLLFMYIQRYLVEGLGGAVKG
>NZ_CP009287.1|WP_025708033.1|6701488_6702133_-|MOSC-domain-containing-protein
MEVISLNVGKPKTVDYRGKPLETGIYKMPAPGKVQLHLEGFDGDGQADLVNHGGADKAVCVYPIEHYAYWEQWLGKKLEYSAFGENITASGLLETEVCIGDVYEIGTTLLQVSQPRFPCYKLAQKHGPADMPAQVLKTGYSGFYFRVLREGQIAAGDSIIKQESGEGSFPIKQVLYLMEHGRKDKTGLAELAALETLSAVTREKFRGWLDTAER
>NZ_CP009287.1|WP_025708032.1|6702113_6702644_-|GNAT-family-N-acetyltransferase
MPQLNRDALTIRPSEIKDARELIVLDNMIWTEDTSPGPLMWRSREDYLMHAPPGSQLVALKDGELCGYVGFGCPSGMESNRHVCEVNIAVHPKFQRMGIGRQLIEAIKSHAAENGIRKLRLRVLSCNKPALAFYRKCGFVEEGRLREEFFLGGRYVDEVFMSCMLTGGKEDGSHLA
>NZ_CP009287.1|WP_025708031.1|6702719_6703931_-|MFS-transporter
MKFLQAYPKEIKVFLIASLINATGSALMWPLVTMYVFDELGRSMKDAGFVLLIQALGGIAGQLLGGSLYHKVGVNRLIVGALALTALSLFSIPAASSNWHLFIILMGLFGLFNSLSLPAIQAFVGFRFAEQRAELFNIIYVCNNIGVALGTSLSGFLGNYMLSFVLNGVTSAVFAVFFFFYLRKVGTASPHEQTRRKQPQPAQSGWRLMGQIRIYLFMSIGSMFLLIGNSIWNTGVSPFIISEGWPKQTYGFLWTLNGILIFAAQPLVSLIKRWFAATSTAQMTASAVFYLSGYAVILLMPSYAGLFLAMLLATLGEMLISPAMPSFISDHADRNAPFYLGLSGGIGAIGRVIGPYLMGVQFDNGGLAPTGWLACGMAVLSVGFFGLHAYINRSARTLGRNTA
>NZ_CP009287.1|WP_081954777.1|6704049_6706155_-|molybdopterin-oxidoreductase-family-protein
MSYSGDGVFQAVCPLDCPDTCGLLVHKQNGKIIKVEGNPGHPVTKGAICNKVRHMAERVHHPERLLQPLRRTGPKGSGSFTPISWEEAIGEISGRFKELSAAHGPESILPYSFYGNMGVLSVDGMDRRFFNALGASRLEQSICSAAGSAGWKYTMGFNGGTSPEDTVNADLIIVWGGNIVSTNMHQVVYAEQARKRGAKVVVIDVHRNRTAQWADWFLPLYPGTDTALALGLMHILFRDGMTDNAFLKRYTTGHEELRGHVLAYPPERVAEITGIAAADIEKLAKLYGEAKVSHIHIGNGLQHHDNGGMNVRTIACLPALTGAWLKTGGGAIKSNGGYSSTNDRALTRPDLRPNRRARTINMNRIGEALELKEEPVMGMFVYCCNPVVVAPDAERVRKGFAREDLFTVVHDLFMTDTALYADIVLPATSTLENVDLYGSYWHHYMQLQEPVLDAPGECKSNMEVFSLLGRAMGFDAEAFSESEYDMIRKALDYPRNPYLNGVTLERLTAERFVKLDMSPQADYLDNLPTPSGKIELYSKAMELAGLPPLPTYTPLKEGYDGERQPQPGTAYPLMFVSPPNHNFLNSTFSNVEKHQRMEKRPTLQIHPEDAAVRGIEEGDELTVYNGRGAIELWAVVTDKMLPGTVISQGLWWEGKGHKQRVNVLTPDRLSDMGNGATFFSATVEVKRRGEAKSNGESVGFK
>NZ_CP009287.1|WP_025707348.1|6706433_6707261_-|formate/nitrite-transporter-family-protein
MAYNKPQGIAEVTVENGIKKAHNPLSTVLILGFLGGAFIALGFLLDIRVIAGAPKEWGSIANFIGASVFPVGLILVLLAGGELLTGNMMAVPLAFMSKKISFWETIKNLVLITISNFAGALFVAYFFGHVVGLTADGVYLDKLVDMAGHKIDATFLQAFVSGIGCNWLVALAVWLSYGADNFSGKILGIWFPTMAFVAIGFQHVVANMFLIPAAIFEGHFTWSQYFGNFAPVWLGNLTGGAIFVAFAYWMAYLRKAPAVAQSVDSIAPAGVKKHA
>NZ_CP009287.1|WP_025707347.1|6707525_6708890_-|FAD-dependent-oxidoreductase
MKVAVIGCTHAGTAAIVNTAQLYPEAEITVYERNDNISFLSCGIALYVGGVIKDPQGLFYSSPEKLAELGVKTNMRHEVIQIDTDRKTLRARNLATGQEFDDSYDKLIMTTGSWPIVPKLEGMELDGILLSKNYSHSNTIIERAQQVDRITVVGAGYIGVELVEAFQMNGKQVTLIDGEDRILSKYLDEEFTAPIQQSLEDHGITLALGEKVSSFAGENGKVTKVITSKGEHETDLVILCIGFRPNTELLKGKVDMLPNGAIIVNDYMQTSLPDIYAAGDSCAIHYNPTGKNAYIPLATNAVRMGTLVARNLVSPTIAYMGTQGTSGIKIYEDNIAGTGLTEDAAKAEGMDVESVLLTDNYRPEFMPTFEQVQLKVVYDRSTRRILGAQIMSKMDLTQSINTVSVCIQNKMTVDQLAFIDFFFQPHYNKPWNFLNTAGLQALPATVPHKETVTV
>NZ_CP009287.1|WP_042267583.1|6709208_6710849_-|formate--tetrahydrofolate-ligase
MRLITEVASAAGIHEEHLELYGKYKSKLSPSLWDELKHKQDGKLVLVTAMNPTPAGEGKTLTTIGLSQALNAAGVKTVAALREPSLGPTLGMKGGATGGGKAQIVPADEINLHFTGDIHAVTSAHNLLSAMIDNHLFQGNLLGLDPQRIVWKRVMDMNDRSLRSIVTGLGDGNGTVRESGFQITTASEIMAVLCLCDDLADLKKRLSRMLVGYDQSGQPVTAQDIGAVEGMTALLKEAVKPNLVQTLEGTPVIVHGGPFANIAHGCSSVIGTRYALKLGDVVVTEAGFGADLGAEKFMDIKCRQAGLTPAAAVLVVTVKSLKYNGGVRKDELYKTNRAALLSGISNMERHIENLGKFGVPVLVAVNHFEGDAPSEINDVVEACSRLGVPAAISKVWAEGSAGGVELAMELKKLLEQGEGQPAAFAPLYEDNLDIPAKINTIVTEIYRGAEVAFSPAAKRSLGIIEKLGLQQLQVCMAKTPYSFSDQPRLLGAPEGFTMGVRDITLSLGAGFAVIITGNIVTMPGLPAKPAAEGIQVDLNGAINGLE
>NZ_CP009287.1|WP_025703138.1|6711142_6711619_-|glutathione-peroxidase
MSIYSFAGVKPSGAEVPFKDYEGKVLLIANTASKCGLTPQYGDLQKLYEQYGGQGLVVLGFPCNQFAGQEPGTSEEAEEFCQINYGVTFPVFAKVDVNGPDASLLFQYLKGQQPGEGGSSDIQWNFTKFLVDRSGNVVARVEPKESPESMKEQIEALL
>NZ_CP009287.1|WP_025703135.1|6711732_6712752_-|LLM-class-flavin-dependent-oxidoreductase
MKLSILDQSPVPEGSTPAEALAETVSLAIEADRLGYHRFWVSEHHAARGLAGSSPEVLMAHLAAVTSRIRIGSGAVLLPYYSAYKVAENFRVLEALYPGRIDLGLGRAAGGGALAARALQENRTGGAELYELQIRDLLSYLYGAPDDEHRFAGLETSPQVSTAPELWLLGSSRDSAALAARLGTGYAYARFINSDGGSMAVRSFRSSFRPSPAASAPRALVSVFAICAETSAEADRLAASMDLSLVQLEKGHVSTGTPSVETALGYNYTPYDRFRIGDNRRRMVLGSPDEVRRQFTALIEEYQCEEIMFATLVHRYEDKLKSLRLIADVCGLHGEAGAD
>NZ_CP009287.1|WP_025703134.1|6712951_6713290_-|DUF3243-domain-containing-protein
MSEHNHVVNKDGNVTIAKVSEALDRIDPEQKEVILKNFEDFRSYLGKRIQLAQKIGLGEEQLAAAAEKIADYLAAHEEPRNSEEKLLLELWKVGSKEERHRLAHMLVKLARN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP009287_36

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009287_36

6755288-6755361

Orphan

Consensus_repeat	Method
TAAGTGGAAAAAGGATCACTGAT	CRISPRCasFinder

1 spacers

DinG

The CRISPR arrays of NZ_CP009287_36

>merge|NZ_CP009287|36|6755288-6755361|CRISPRCasFinder
TAAGTGGAAAAAGGATCACTGATTTGCTCCAGCACCATGCCATCCGGAAGTTAAGTGGAAAAAGGATCACTAAT

>NZ_CP009287|36|31|6755288-6755361|CRISPRCasFinder
TAAGTGGAAAAAGGATCACTGAT	TTGCTCCAGCACCATGCCATCCGGAAGT
TAAGTGGAAAAAGGATCACTAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009287.1\|WP_025705099.1\|6748709_6750719_-\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|236645
NZ_CP009287.1\|WP_025707001.1\|6757578_6757845_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_042267600.1\|6755494_6756496_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP009287.1\|WP_042267598.1\|6750950_6752606_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704183.1\|6740625_6741594_-\|Gfo/Idh/MocA-family-oxidoreductase	unknown	unknown	gnl\|CDD\|223745
NZ_CP009287.1\|WP_020426973.1\|6765874_6766351_+\|DsrE/DsrF/DrsH-like-family-protein	unknown	unknown	gnl\|CDD\|379334
NZ_CP009287.1\|WP_025706999.1\|6760505_6761129_+\|membrane-protein	unknown	unknown	gnl\|CDD\|224500
NZ_CP009287.1\|WP_025707002.1\|6756589_6757543_-\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	unknown	unknown	gnl\|CDD\|237373
NZ_CP009287.1\|WP_042267596.1\|6744211_6746098_+\|LTA-synthase-family-protein	unknown	unknown	gnl\|CDD\|224287
NZ_CP009287.1\|WP_025703808.1\|6752598_6753399_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224054
NZ_CP009287.1\|WP_025706995.1\|6764735_6765617_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197666
NZ_CP009287.1\|WP_025704187.1\|6746920_6748615_+\|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl\|CDD\|223910
NZ_CP009287.1\|WP_174469039.1\|6753668_6755036_+\|cation:dicarboxylase-symporter-family-transporter	unknown	unknown	gnl\|CDD\|366058
NZ_CP009287.1\|WP_025706998.1\|6761351_6763496_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	unknown	unknown	gnl\|CDD\|238923
NZ_CP009287.1\|WP_025706997.1\|6763627_6763951_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009287.1\|WP_025704182.1\|6739858_6740539_+\|CidB/LrgB-family-autolysis-modulator	unknown	unknown	gnl\|CDD\|377236
NZ_CP009287.1\|WP_025706996.1\|6764122_6764575_-\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319941
NZ_CP009287.1\|WP_025704184.1\|6741647_6743957_-\|ATP-dependent-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_CP009287.1\|WP_025707000.1\|6758018_6760385_+\|EAL-domain-containing-protein	unknown	unknown	gnl\|CDD\|227334
NZ_CP009287.1\|WP_025704186.1\|6746278_6746710_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670

Protein	Function_ID	Function_description	E-value
NZ_CP009287.1\|WP_025705099.1\|6748709_6750719_-\|EAL-domain-containing-protein	gnl\|CDD\|236645	PRK10060, PRK10060, cyclic di-GMP phosphodiesterase.	3.82982e-114
NZ_CP009287.1\|WP_025706998.1\|6761351_6763496_+\|bifunctional-diguanylate-cyclase/phosphodiesterase	gnl\|CDD\|238923	cd01948, EAL, EAL domain. This domain is found in diverse bacterial signaling proteins. It is called EAL after its conserved residues and is also known as domain of unknown function 2 (DUF2). The EAL domain has been shown to stimulate degradation of a second messenger, cyclic di-GMP, and is a good candidate for a diguanylate phosphodiesterase function. Together with the GGDEF domain, EAL might be involved in regulating cell surface adhesiveness in bacteria.	8.13656e-102
NZ_CP009287.1\|WP_042267600.1\|6755494_6756496_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	4.20282e-80
NZ_CP009287.1\|WP_025706996.1\|6764122_6764575_-\|VOC-family-protein	gnl\|CDD\|319941	cd08353, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	9.50458e-87
NZ_CP009287.1\|WP_025704183.1\|6740625_6741594_-\|Gfo/Idh/MocA-family-oxidoreductase	gnl\|CDD\|223745	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only].	3.51242e-50
NZ_CP009287.1\|WP_020426973.1\|6765874_6766351_+\|DsrE/DsrF/DrsH-like-family-protein	gnl\|CDD\|379334	pfam13686, DrsE_2, DsrE/DsrF/DrsH-like family. DsrE is a small soluble protein involved in intracellular sulfur reduction. The family also includes YrkE proteins.	1.86413e-61
NZ_CP009287.1\|WP_025706999.1\|6760505_6761129_+\|membrane-protein	gnl\|CDD\|224500	COG1584, COG1584, Predicted membrane protein [Function unknown].	8.53821e-22
NZ_CP009287.1\|WP_025707002.1\|6756589_6757543_-\|1,4-dihydroxy-2-naphthoate-polyprenyltransferase	gnl\|CDD\|237373	PRK13387, PRK13387, 1,4-dihydroxy-2-naphthoate octaprenyltransferase; Provisional.	1.27844e-81
NZ_CP009287.1\|WP_042267596.1\|6744211_6746098_+\|LTA-synthase-family-protein	gnl\|CDD\|224287	COG1368, MdoB, Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily [Cell envelope biogenesis, outer membrane].	1.86787e-87
NZ_CP009287.1\|WP_025703808.1\|6752598_6753399_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	1.69902e-83
NZ_CP009287.1\|WP_025706995.1\|6764735_6765617_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|197666	smart00342, HTH_ARAC, helix_turn_helix, arabinose operon control protein.	1.11165e-28
NZ_CP009287.1\|WP_025704187.1\|6746920_6748615_+\|methyl-accepting-chemotaxis-protein	gnl\|CDD\|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	2.3281e-64
NZ_CP009287.1\|WP_174469039.1\|6753668_6755036_+\|cation:dicarboxylase-symporter-family-transporter	gnl\|CDD\|366058	pfam00375, SDF, Sodium:dicarboxylate symporter family.	4.15392e-114
NZ_CP009287.1\|WP_025704182.1\|6739858_6740539_+\|CidB/LrgB-family-autolysis-modulator	gnl\|CDD\|377236	pfam04172, LrgB, LrgB-like family. The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control of murein hydrolase activity and penicillin tolerance.	1.43025e-80
NZ_CP009287.1\|WP_025704184.1\|6741647_6743957_-\|ATP-dependent-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	4.78338e-72
NZ_CP009287.1\|WP_025707000.1\|6758018_6760385_+\|EAL-domain-containing-protein	gnl\|CDD\|227334	COG5001, COG5001, Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain [Signal transduction mechanisms].	5.66538e-108
NZ_CP009287.1\|WP_025704186.1\|6746278_6746710_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.41314e-21

>NZ_CP009287.1|WP_174469039.1|6753668_6755036_+|cation:dicarboxylase-symporter-family-transporter
MNNIDNNLLSAIETNWIGFAVSIFVFGILFLSARKRIGFGTRVLAALGIGLIAGIFFQYFDLETEAIKTFGSIYVSLIRMLVIPLVFVLVLNSISSLTNLEYLRKIGIKTFAWFLGTTGVASIIGLSVALLFNPGKGIQQAVPEGFEAREIPTFSQVILDLVPSNPVNEAATGKVVPLLIFAIFLAVAIIKVGSKKPEAVKPVRDLIESLTAVLHQVVKFVIRLTPYGVFALIAGITARYGWDTLQELGSVIITSYVALIIHFALIFGGLVLLVAKINPLRFFRKIYPTLTVAFTTRSSYATLPVNLEVITKRLHVSPRIASFVAPLGASVNFNGCGGIWPAIVAVFTAQVFGIQLTGTDYVTLVLVSIISSIGVAGVPGPAVISTTVVLTALGLPLEGIAIVAGVEALIDMGRTAVNATGTTVTALLVANSEGEFDREAFNRRDDDEEILLNAL
>NZ_CP009287.1|WP_025703808.1|6752598_6753399_-|ABC-transporter-ATP-binding-protein
MGLTEEPVISISGLWMNYSDRMVLRGIDLEVYRGQIIGYIGPNGAGKSTTVKIMLGLVEGYTGTVRIFGRDIADGNAAYKRRIGYVPEIAELYDSLTAREYLTFIGELYGMKRTEADAKAERLMDLLNLKKAYDMRIASYSKGMKQKVLLISSMLHDPDILFLDEPLSGLDANSVMVVKEIFASLAAQGKTIFYSSHIMDVVEKISSRIILINNGDIVADGTFAQLQEQNREGSLEDIFNQLTGFDKYRDIAGEFVAVLGEGAPHE
>NZ_CP009287.1|WP_042267598.1|6750950_6752606_-|hypothetical-protein
MNDFWVLKLLDRLQGGFRRAGVDYKMLRSILQVKLTMDGRRTPTVLGTQKGSQGSEGSPLRVQWIYLLLGLMLILFVVPGSNYMLNMSVLFAVVMFMITTTLISDFSSVMLDLRDKNILFSKPVDRRTLNMAKSLHVLIYLVTLTLTFTGPSLLVALFKQGVLFFLVYAVEILLMDCFILVITALLYLLILRVFDGEKLKDIINYVQIILSVGIAVGYQLVPRLFDMTDMTGSFQPAWWQYVIAPVWFAAPFEVLAGGGRGVDFNVLAALSVIIPLVLLLAYIKLMPLFERSLQKLAEQGAAGKDKSRYPGLLSGLLCRNKSEAMFFRFTWSMMRNERDFKLKVYPTVGLSLILPFIFIFNQVWTSGPSLNTESKAYLFIYLCALLLLTVVQMLRYSSSYKGAWVYKTIPLAGTAPVYRGMLKAVLLRLMLPLFVLESAVFLWLFGARILPDLAAVMLALPLYSVICFRVLPQALPFSEKYEAAKQKDFSVSGFVLLFILMGLAGLHYIVSLFPFGIYIYLVILAAANVWAWRAAFSHEGSRPGQIPTLGA
>NZ_CP009287.1|WP_025705099.1|6748709_6750719_-|EAL-domain-containing-protein
MDQMGIHYNLWMVLLSFALAATAAYSALNLILQVFHSAGRVRRLWLLSSACVLGSGLWAMHFVGIMASYLPFKVSYHPGIAGFSLVISLCACYLSLWIATMSRLRTGRLLLSGLILGSGISMMHYMGMYSMKLQTGIHYETLTQGLSVAVACLASYTAVFLFHKFKDYTGFSRWKLYSAVFIGLAVTGMHYISLRASFWEVDNWTGAKPLLMEADVVLLTGVSLVTLFMLAVSCGAVFLDRHVLERMAYHDPLTELPNRHGLERYFKGEFFGGPSGAVLFVDLDRFKSINDTLGHDIGDMLLQEVAGRLRRVINAKGKVFRLGGDEFLIALPVCTMEAAREEAQHILREVKKAYSIEGNELYVTASVGISMTPLHGTDRSALMKAADTALYTSKDSGKNKFSVFDQEMNRHQLWRMSLEKDLRKALARSEFMVVYQPKWDSLMNVTVGLEALLRWRHPEHGIISPAEFIPIAEETGLIVPITYWMLHDVCSQNKLWHKASVANVAVSINMSARMFEGGSLYEVVEEALVRSGLEPHFLELEITESIAMNNMEETVAQLSKLRSLGVRVSLDDFGTGFSSLGNLDEIPVNTLKIDQVFIRKSKMHSKKAIISNIIAIASNLNMEVVAEGVETPEQIELLQSLGCRVMQGFYYGRPMPVSELGQWFIENTA
>NZ_CP009287.1|WP_025704187.1|6746920_6748615_+|methyl-accepting-chemotaxis-protein
MKLATKLTWMILIVLLLVGSSIGFFGYRAAYHQVDEAAGIELVGCANITTGLIDPADISALVSGDRSKVSAIEDRIGWIVAHKPIFKEAFILSLDGKILAADASFKKRGYKAGDDFYFTEEDKAMITTMKHSAYSKVYTYQGTSLKTGYGPIYQDHDPTKPIIALMAINFDGPLIQERTMDIIVQPFIIGGAILIVAILAAYLMIRRMVSPLTKLSGSVNTIARGDLTHEPLLFNSKDEIGTLARDFNDMTLNLRDIITQVNDTSMLVASSSQELTASAQETNRAGEHSANVTIELAEGAGTQLKDLEGSYQAVQDMSRFISEIAGNADSAKDTAANNAQKARLGRQSLDSTTSQIGIVSESIHDLSDIIDTLGSHSKEIENIVGTISSIAEETNLLALNAAIEAARAGEEGRGFAIVAGSVRKLAERSAASAGQIGELVSLIISQMDNAGETMKRSTEEMEQGKELILSAGRSFSEIETSVSDMSSQSQQISETVRELGLIAGGLVESIQKIVTVSNYTAEGAMTLSATSQEQLAAMEEVESSAGFLSSLAEKLQVLVERFKV
>NZ_CP009287.1|WP_025704186.1|6746278_6746710_-|MarR-family-transcriptional-regulator
MSQQIDPLVERLGLSMWKVQRKIASQMSLHQEIGLTVPQFGLLRMIAQEQNPRVIQLADKMEVKSSAVTVMLDRLELLGLSAREQDEHDRRAVIVTLTDKGKKLLEEGKYRFLLLLSEYLAILQPEELQNFADYYQMLDQQER
>NZ_CP009287.1|WP_042267596.1|6744211_6746098_+|LTA-synthase-family-protein
MQKEGEAVSSLNVKRWLIKPFVFFSILFVLKSFLAWGVIFGDLLSWKTLLTEIPFVWALFALIERFASKRKLGYYMTVNLLVTAIFFAAIMYFKYYGVIVTYHAAEQVNQVTAVRNSVFSLMDPYYLLIFADIIVLGIYFFFNKKGRAYKKDNINHRSGKLSHSLLFAVSLALCLFNILPNKASMNEIKKAQEMGILNYEAYTIFAKDKPELVNASEITQDAINKLKGIDPAAVSPLQGAAKGKNLVIIQLESFQSFLLGLKVDGHEITPNLNRLMENSLYLPNFYQMVGQGNTSDAEFVVNSSFYIPPQGAATMAYVDKELPSLPRLLQENGYQTATFHTNDVEFWNRGELYSSLGWEHYYDHKFFGDEDTFFFGPSDEALYRKTADKLKEMDADSKPFYAQVISMSAHHPFTIPEEKYKMKLPERYEGTFVGDYIRSQNYADFAFGQFVDELKADGVWDNSLIMVYGDHMGLPIYSLDHDDKELMKEIYGHEYEYADMLNIPLIIHEEGKIGTQILDHVGGEVDIMPTAASLLGVSMDNNIHFGQDLTSQSYNLLPQRYYLPTGSFIASSGLLIPGNSFEDNTQFTLASGGKAPAGTEDEYNRALRLRQLSDSYVTQLPDKVKDTE
>NZ_CP009287.1|WP_025704184.1|6741647_6743957_-|ATP-dependent-helicase
MDHAEIFLSVRTLVEYAFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKTEIPYEGLLFIIDGRCDGLLAGEDGRLIVEEIKSIAGPLDSTLEGKEVHWAQGLMYAYMIAVGQELSSIEVKLTYVMRGSEEQRSLYRTVAREELEAFAAETVARYAPYAKLRVRHEARRGESIRSLAFPFQDYRQGQRHFAAAVYKTVAEGVNLFAQAPTGIGKTMSTLFPAVKALGEEIAAGIFYLTAKTVNRFAAQEAVMLLIGGGLQLHAITLTAKEKACFREEGLCSKEACPFAEGYYDRVNAAVLDMLEHETMMTQEVIAVYAQRHEVCPFEFSLDAAYACDLVICDYNYIYDPRISLKRLPEERKKKTVLLVDEAHNLVDRGREMFSASLTKAPFLNLQRQYKTVNPALSAAAKAVNAFFIALRKSCNDNGEGQWAEYPGELPQLLEAFAAEAEMELASPSSAIIALAEDGEGSLLDTYYAVQGMLRTFKTYDERYVTYAEVRRGDVFLKLFNLDPSHLLQQMAKGFRSQILFSATLSPMSYYRDMIGAAEEDYSLHVASPFHKEQWEVSVVPVSTRYHDRADSLIPLSDALRGMVARKGNYLVFFPSYAYLQSVFEVFTDKYPEITTLVQGSGMSEQAREAFLASFRPDNPQTLLGFAVLGGIFSEGVDLPGDRLNGVMIVGVGLPQVGLERNLLRGYFGSQGKNGFDYAYVYPGMCKVQQAGGRLIRSESDSGIIVLADDRFLQQPYADLLPEEWRAYLIRT
>NZ_CP009287.1|WP_025704183.1|6740625_6741594_-|Gfo/Idh/MocA-family-oxidoreductase
MTLNIGIVGTGWFSKVHADLLSGMEDVKLQAVCGSSRQKGEDMASAYGAEGYGEITEMLDAHKLDAVYICVPPQSHGAIERALIRREIPFFVEKPLGSSTEIPASLLQDIKEHGLLTSVGYHFRYQENIARLKQLLSGDKVGMIVGQWMGGMPGAAWWRDQEQSGGQFTEQTTHIVDLLRYLGGEVTEVYGMFGNRIVHELHEGVTVADVGTVSLKLDNGIVANISNTCVLPGEVGQVGLSFYNDKGLLDWNPDRLMEVRSGDSKEYANSGNPYAAESEAFLHAVRTGDRSRILSDYEDGYKTLKVTCAAYESAKSGLPVKL
>NZ_CP009287.1|WP_025704182.1|6739858_6740539_+|CidB/LrgB-family-autolysis-modulator
MIGLLLLVLTVAVYLLAKRIYASSSKMYASPLIITPLLIISFLLLTGIPYESYNAGGKWLTDLLQPATIAFAIPLHKNFKVLKKHAAEIAAGVLSGTVMAVLSSMLLAKWLHLSGDLATSLVPRSVTTPIAMSISQSIGGVPSITAVFVILTGVLGTLMGPSVLRLFRIDNEIARGVSLGTAAHGTGTSKAFELSSLTGTISSIAMILTALLSIGLAPALLAVFLH
>NZ_CP009287.1|WP_042267600.1|6755494_6756496_-|Gfo/Idh/MocA-family-oxidoreductase
MTQKLRWGIMGCAQIATGSVMPAIRESETGIIQAVASRGLEKSSAVAKELGVAQAYGSYEELLADPDVDAVYIPLPNHLHREWVIRAAEAGKHVLCEKPIALNSREAAEMVEACRKAGVHLAEAYMYRHHPRIAEVREIIASGEIGDLRSIRGTFTYNDAGDTSNIRFNSAWGGGSLYDVGCYPLSAARLLFGAEPEAATVQAIFSPEHDNVDMMASGLVEFPGGVSLIFDCGMWAYNRQLLEVLGTEGRIELPMPFNARFDDAEFFVYSGGEVRRARATGANPYVCQADNFAAAVFGAAPVVAAEDPVLNMILIETCLASARTRQRLSLKQG
>NZ_CP009287.1|WP_025707002.1|6756589_6757543_-|1,4-dihydroxy-2-naphthoate-polyprenyltransferase
MNVKSFLQFVELPTKVASMLPFLLGTLYALYRFEDFYVLRFALMFVSLLSFDMATTAINNYYDYKKAAKTHGYGYETHNAIVHYGLKESTVVAAIAVLLTLAVGSGIALVAETGLLVFLLGGLSFLIGILYSFGPIPISRMPLGELFSGLFMGFVIIFISAYIHSDQTVVTLLFSEGWASLHVHIPEVLYLFWFSVPAILGIAGIMLANNICDIEDDMDNRRYTLPVYIGRKNALLLFRLLYYVSFADLAVLLLLGVNPVLVVLLLLTLIPLRRNIARFEEKQEKATTFILSVKNFMLMSVARIVVLGAAILLKILL
>NZ_CP009287.1|WP_025707001.1|6757578_6757845_-|hypothetical-protein
MNKWTLFRKASRFGVIPVMLIPVVLGTAGHTYGRGVSIRFYLPSLLSVRLLPESLFALLVATPEGSVSAHGQTVIAEWSPVTITTAGT
>NZ_CP009287.1|WP_025707000.1|6758018_6760385_+|EAL-domain-containing-protein
MKLRKKMIIFTCVVALVTLGINYLLLHLIMLNRFEKLDEAALKHSLDDALTSYQEELLDMRTGMLNYSLRDETYRFVEGRRSADSPLAADDGFIRSTFNSATFEVNHLDMMALLDKSGQPLYGGTYDTARKSISPLTPELHTLFKLMNSRLPALASASDSQTGIVLLDQGPMLITLTPIVDSSTGKPVIGTAVAGRMLQQEEATPVREDGPTSIQITRATSEMLAQSGGKDRWMSPASGSMLSVHTVVNDLFGNPGVVFTVKQPRQIYENGQESVYSFRLAFFIVTILSCIGSMLFVNRSILGRMTSLIKNIRDIGSSKDLSIRIISTGRDEFSDVEHEFNRMIDSLQQAQEELQQQSMLDPLTHLPNRPLFFAKLNTAIGAAKGSNRQIALVFIDLDHFKTVNDTLGHDFGDAMLQETAFRLEQVVGTHDVVSRLGGDEFTILLSDIPDPAAISAQLSSIQDALSMPHQIQGHLFYCTASIGISIYPQNGDDADYLVKQADLAMLHVKETGRNNIFQYSEDLEESIRRKKVLAQQLLSAAANDEFEVHYQPILNAARLQVHKVEALLRWTSPSYGPVSPAEFIPLAETSGSIVSIGGWVLRQVCADMRRFRENGLFLTAAVNISALQLMQPGLLELLLGLLHEYELPPSSLELEITESVLVSGDSILESLQQLRAHGFHISLDDFGTGFSSLSYLRRFPVDVIKIDRSFVSEMTPQPQGDVLVKAIIELSHNLGLSVVSEGIELQEQFDMLRSLGSDELQGFYISKPVKAGEIQSFLSQKKLFFGEK
>NZ_CP009287.1|WP_025706999.1|6760505_6761129_+|membrane-protein
MSAQSPNTQSVKIVTADPSAIGLFGLAIVTLVASSQKLEITTGLSYCIPWAIFLGAFAQLFASIQDAKHNNTFGMTAFGAYAFFWFGMAASWLIKLGVFGTVLAEGVDPKQLGFVFLGYLVFTLFMTLGAVEANRVLLVIFVLIDFLFLGLTMDSFGVAAEFFHKLAACSELAIGIVSLYGCGASVLNAHFGRQFLPVGAPLGVFKK
>NZ_CP009287.1|WP_025706998.1|6761351_6763496_+|bifunctional-diguanylate-cyclase/phosphodiesterase
MAFINKKPLTIILGFVVVLQLSLFYYYSLSVDREYRAEKADLSSKAVMLTSNIEERVSIVKGVSSFIQTVGFDADPNLINEYLHTAYTNNSSNVMNIMIAPDGLIRYLYPLSGNTAILGKSLLLDSALSSPGMVQETIRSGGVTIDGPRTLAQGEYGMVIRQAIYHNKSFTGIVSVTLKIENIVDQLLLKDTQIFVTTDDHTFLFGSPVSKEDKRLMVPVTVYNQHWLMGIPTPSHKKWEVLRSVLWIDIAILLIIAFILYIFWHQSRFNRELERVVSIRTRDLRVSKRLYEKLAHYDSLTEIPNRLYFMDEFERLLQSAEPTQTYTLFFFDLNRFKEINDTLGHSIGDQVIKTLANRLKNGKVPFKLFARTGGDEFVMVFSDLPREHIPIIAGDISGLISDTLLISGAHLSLSTSIGVSLYPEHSLNKDDLLKFADMSMYQAKSQEEANYFIFDWELREKLEQKTMIAKYLHSALEREEFVLHYQPQINAVTGKMIGMEALVRWNHPEKGLIGPGTFITAVEEAGLMIQLTDWVLREVCRQLCEWRTMGLPLHRTSINISNSWFYNRNLIENLLAVLDQYGLETSMLEFEITESTALLEEHYPLLQQMRDHGIVVSIDDFGTKYSSLNYLKHFPVNKIKIDRTFITGIGVSSIDETIIKSIVYVASQLGYELIAEGVETQEQLEFLIKHNCPHIQGFFFFPPLPAEDIHKVAS
>NZ_CP009287.1|WP_025706997.1|6763627_6763951_+|hypothetical-protein
MNTLSTPEWIVTIVFALILAIIAYRVIRGMPNMAGNITAFRKRTLVWTQVALVLAVLQLNFKAGDWRFGIILGLIVLFTGSVWLAARYYDLRRPEAADPAEQETGKE
>NZ_CP009287.1|WP_025706996.1|6764122_6764575_-|VOC-family-protein
MAKNKLLRMDNISIVVESLDDAISFFEEIGLKLEGRATVEGEWAGRVTGLGSQCVEIAMMVTPDGHSRLELSRFINPPTISDHRTAPVNALGYLRVMFTVEDIDEMVSRLTKYGAQLVGEVVQYEDSYRLCYIRGNEGLLIGLAEQLNNQ
>NZ_CP009287.1|WP_025706995.1|6764735_6765617_+|AraC-family-transcriptional-regulator
MNNPSSYGVYGFRFSEPDHLPLCNLFAAGHDVVTDASYHWNGMERTDGPLLLFQYTAEGSGIFETEQETFRIGSGRAFLAEIPGSHRYYHPGDSVPWEFYFLLFRPQPLLPLWEDIKSKLGAAPAIVPGSRPIRILRDIVHEAYSGRISDPYIASSLLHQFMMELGRLSSSGPRDAAEWPTAVRESVQFIEERYSSMIGQEQLAEQMGLSKFHLLRTFSKYVGLTPNEYLNRTRIERAIELLTTTDLSIEAIASRVGYSSGSYFIKVFQKLTGQTPGSFRSGSGSLNYSRLFF
>NZ_CP009287.1|WP_020426973.1|6765874_6766351_+|DsrE/DsrF/DrsH-like-family-protein
MGKRMNLLMFSGEYDKAMAALILANTARDIDVEVTMFFSFWGLFLVRDPDKMTLEDKTIYEKLMDVITPKGPEQLPLSRMNFSGLGKLMLEEMIEDQGAPKLIHFLKGARKKNIKFYACKLSVDIMGFKPEELLPEVEIIDAAAYLKDALESDMQLFI

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP009287_8	8.3\|1241261\|20\|NZ_CP009287\|CRT	1241261-1241280	20	NZ_CP009287.1	1241516-1241535	0	1.0
NZ_CP009287_13	13.2\|1487276\|34\|NZ_CP009287\|PILER-CR	1487276-1487309	34	NZ_CP009287.1	4272833-4272866	0	1.0
NZ_CP009287_9	9.1\|1285109\|28\|NZ_CP009287\|CRISPRCasFinder	1285109-1285136	28	NZ_CP009287.1	1608878-1608905	2	0.929
NZ_CP009287_9	9.1\|1285109\|28\|NZ_CP009287\|CRISPRCasFinder	1285109-1285136	28	NZ_CP009287.1	6660863-6660890	2	0.929
NZ_CP009287_16	16.1\|2486373\|26\|NZ_CP009287\|CRISPRCasFinder	2486373-2486398	26	NZ_CP009287.1	1971228-1971253	2	0.923
NZ_CP009287_18	18.1\|2828300\|27\|NZ_CP009287\|CRISPRCasFinder	2828300-2828326	27	NZ_CP009287.1	685088-685114	2	0.926
NZ_CP009287_19	19.1\|3188487\|28\|NZ_CP009287\|CRISPRCasFinder	3188487-3188514	28	NZ_CP009287.1	2980352-2980379	2	0.929
NZ_CP009287_19	19.1\|3188487\|28\|NZ_CP009287\|CRISPRCasFinder	3188487-3188514	28	NZ_CP009287.1	2980419-2980446	2	0.929
NZ_CP009287_19	19.1\|3188487\|28\|NZ_CP009287\|CRISPRCasFinder	3188487-3188514	28	NZ_CP009287.1	4009053-4009080	2	0.929
NZ_CP009287_19	19.1\|3188487\|28\|NZ_CP009287\|CRISPRCasFinder	3188487-3188514	28	NZ_CP009287.1	4795026-4795053	2	0.929
NZ_CP009287_19	19.1\|3188487\|28\|NZ_CP009287\|CRISPRCasFinder	3188487-3188514	28	NZ_CP009287.1	4902852-4902879	2	0.929
NZ_CP009287_19	19.1\|3188487\|28\|NZ_CP009287\|CRISPRCasFinder	3188487-3188514	28	NZ_CP009287.1	4902916-4902943	2	0.929
NZ_CP009287_19	19.1\|3188487\|28\|NZ_CP009287\|CRISPRCasFinder	3188487-3188514	28	NZ_CP009287.1	6838801-6838828	2	0.929
NZ_CP009287_21	21.1\|4389884\|28\|NZ_CP009287\|CRISPRCasFinder	4389884-4389911	28	NZ_CP009287.1	7007628-7007655	2	0.929

1. spacer 8.3|1241261|20|NZ_CP009287|CRT matches to position: 1241516-1241535, mismatch: 0, identity: 1.0

catttgctccaatgggctgt	CRISPR spacer
catttgctccaatgggctgt	Protospacer
********************

2. spacer 13.2|1487276|34|NZ_CP009287|PILER-CR matches to position: 4272833-4272866, mismatch: 0, identity: 1.0

gactttgaagatctggagaaaggagaatcccaat	CRISPR spacer
gactttgaagatctggagaaaggagaatcccaat	Protospacer
**********************************

3. spacer 9.1|1285109|28|NZ_CP009287|CRISPRCasFinder matches to position: 1608878-1608905, mismatch: 2, identity: 0.929

aggctgcggagaacggggtgctggggcc	CRISPR spacer
aggctgcggagatcggtgtgctggggcc	Protospacer
************ *** ***********

4. spacer 9.1|1285109|28|NZ_CP009287|CRISPRCasFinder matches to position: 6660863-6660890, mismatch: 2, identity: 0.929

aggctgcggagaacggggtgctggggcc	CRISPR spacer
aggctgcggagatcggtgtgctggggcc	Protospacer
************ *** ***********

5. spacer 16.1|2486373|26|NZ_CP009287|CRISPRCasFinder matches to position: 1971228-1971253, mismatch: 2, identity: 0.923

cctgcggagaacagagtgctggggca	CRISPR spacer
cctgcagagaacagggtgctggggca	Protospacer
*****.********.***********

6. spacer 18.1|2828300|27|NZ_CP009287|CRISPRCasFinder matches to position: 685088-685114, mismatch: 2, identity: 0.926

ctcagaaatcaacaaacgtgaggttta	CRISPR spacer
ctcagaaatcaacaatcgttaggttta	Protospacer
*************** *** *******

7. spacer 19.1|3188487|28|NZ_CP009287|CRISPRCasFinder matches to position: 2980352-2980379, mismatch: 2, identity: 0.929

aagcatatgcttccgaagcgagttttgt	CRISPR spacer
aagtatatgctttcgaagcgagttttgt	Protospacer
***.********.***************

8. spacer 19.1|3188487|28|NZ_CP009287|CRISPRCasFinder matches to position: 2980419-2980446, mismatch: 2, identity: 0.929

aagcatatgcttccgaagcgagttttgt	CRISPR spacer
aagtatatgcttccgaagctagttttgt	Protospacer
***.*************** ********

9. spacer 19.1|3188487|28|NZ_CP009287|CRISPRCasFinder matches to position: 4009053-4009080, mismatch: 2, identity: 0.929

aagcatatgcttccgaagcgagttttgt	CRISPR spacer
aagcggatgcttccgaagcgagttttgt	Protospacer
****. **********************

10. spacer 19.1|3188487|28|NZ_CP009287|CRISPRCasFinder matches to position: 4795026-4795053, mismatch: 2, identity: 0.929

aagcatatgcttccgaagcgagttttgt	CRISPR spacer
aagcgtatgcttccgaagcaagttttgt	Protospacer
****.**************.********

11. spacer 19.1|3188487|28|NZ_CP009287|CRISPRCasFinder matches to position: 4902852-4902879, mismatch: 2, identity: 0.929

aagcatatgcttccgaagcgagttttgt	CRISPR spacer
aagtaaatgcttccgaagcgagttttgt	Protospacer
***.* **********************

12. spacer 19.1|3188487|28|NZ_CP009287|CRISPRCasFinder matches to position: 4902916-4902943, mismatch: 2, identity: 0.929

aagcatatgcttccgaagcgagttttgt	CRISPR spacer
aagtaaatgcttccgaagcgagttttgt	Protospacer
***.* **********************

13. spacer 19.1|3188487|28|NZ_CP009287|CRISPRCasFinder matches to position: 6838801-6838828, mismatch: 2, identity: 0.929

aagcatatgcttccgaagcgagttttgt	CRISPR spacer
aagcctatgcttccgaagccagttttgt	Protospacer
**** ************** ********

14. spacer 21.1|4389884|28|NZ_CP009287|CRISPRCasFinder matches to position: 7007628-7007655, mismatch: 2, identity: 0.929

tgccccattctcctgttctccgcaggtt	CRISPR spacer
tgcccgatcctcctgttctccgcaggtt	Protospacer
***** **.*******************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009287_2	2.1\|655159\|25\|NZ_CP009287\|CRISPRCasFinder	655159-655183	25	CP040041	Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence	170227-170251	4	0.84
NZ_CP009287_12	12.1\|1476641\|28\|NZ_CP009287\|CRISPRCasFinder	1476641-1476668	28	NC_010180	Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence	155845-155872	4	0.857
NZ_CP009287_25	25.2\|4911641\|26\|NZ_CP009287\|CRT	4911641-4911666	26	NC_011879	Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence	344928-344953	4	0.846
NZ_CP009287_9	9.1\|1285109\|28\|NZ_CP009287\|CRISPRCasFinder	1285109-1285136	28	NZ_CP007794	Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence	1276360-1276387	5	0.821
NZ_CP009287_9	9.1\|1285109\|28\|NZ_CP009287\|CRISPRCasFinder	1285109-1285136	28	NZ_CP032346	Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence	1043702-1043729	5	0.821
NZ_CP009287_9	9.1\|1285109\|28\|NZ_CP009287\|CRISPRCasFinder	1285109-1285136	28	NZ_CP012915	Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence	1444629-1444656	5	0.821
NZ_CP009287_9	9.1\|1285109\|28\|NZ_CP009287\|CRISPRCasFinder	1285109-1285136	28	NZ_CP032340	Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence	687759-687786	5	0.821
NZ_CP009287_12	12.1\|1476641\|28\|NZ_CP009287\|CRISPRCasFinder	1476641-1476668	28	NZ_AP019410	Enterococcus faecium strain SMVRE20 plasmid pSMVRE20S, complete sequence	28981-29008	5	0.821
NZ_CP009287_33	33.1\|6303835\|28\|NZ_CP009287\|CRISPRCasFinder	6303835-6303862	28	NZ_CP040096	Pantoea sp. SO10 plasmid unnamed1, complete sequence	120336-120363	5	0.821
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NZ_CP045274	Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence	42947-42974	6	0.786
NZ_CP009287_34	34.1\|6563195\|28\|NZ_CP009287\|CRISPRCasFinder	6563195-6563222	28	NZ_CP013709	Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence	7509-7536	6	0.786
NZ_CP009287_34	34.1\|6563195\|28\|NZ_CP009287\|CRISPRCasFinder	6563195-6563222	28	NZ_CP013682	Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence	11074-11101	6	0.786
NZ_CP009287_34	34.1\|6563195\|28\|NZ_CP009287\|CRISPRCasFinder	6563195-6563222	28	NZ_CP013295	Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence	21790-21817	6	0.786
NZ_CP009287_34	34.1\|6563195\|28\|NZ_CP009287\|CRISPRCasFinder	6563195-6563222	28	NZ_CP013844	Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence	43673-43700	6	0.786
NZ_CP009287_36	36.1\|6755311\|28\|NZ_CP009287\|CRISPRCasFinder	6755311-6755338	28	NZ_CP012644	Rufibacter tibetensis strain 1351 plasmid 1, complete sequence	186555-186582	6	0.786
NZ_CP009287_36	36.1\|6755311\|28\|NZ_CP009287\|CRISPRCasFinder	6755311-6755338	28	NZ_LN833432	Acinetobacter baumannii isolate CHI-32 plasmid pNDM-32, complete sequence	78540-78567	6	0.786
NZ_CP009287_36	36.1\|6755311\|28\|NZ_CP009287\|CRISPRCasFinder	6755311-6755338	28	LN997843	Streptomyces reticuli genome assembly TUE45, plasmid : II	651476-651503	6	0.786
NZ_CP009287_3	3.1\|755492\|28\|NZ_CP009287\|CRISPRCasFinder	755492-755519	28	NC_011366	Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence	274685-274712	7	0.75
NZ_CP009287_12	12.1\|1476641\|28\|NZ_CP009287\|CRISPRCasFinder	1476641-1476668	28	NZ_CP038636	Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence	149153-149180	7	0.75
NZ_CP009287_12	12.1\|1476641\|28\|NZ_CP009287\|CRISPRCasFinder	1476641-1476668	28	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	1400396-1400423	7	0.75
NZ_CP009287_30	30.1\|6066555\|28\|NZ_CP009287\|CRISPRCasFinder	6066555-6066582	28	FR751545	Pantoea phage LIMEzero complete genome	4243-4270	7	0.75
NZ_CP009287_30	30.1\|6066555\|28\|NZ_CP009287\|CRISPRCasFinder	6066555-6066582	28	NC_015585	Pantoea phage LIMEzero, complete genome	4243-4270	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NC_003037	Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence	204427-204454	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NC_017327	Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence	1327326-1327353	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NZ_CP021798	Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence	518469-518496	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NC_017324	Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence	1403582-1403609	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NZ_CP009145	Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence	218481-218508	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NZ_CP021801	Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence	117205-117232	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NZ_CP021824	Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence	95019-95046	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NC_018683	Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence	129653-129680	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NZ_CP021809	Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence	497860-497887	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NZ_CP021217	Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence	932481-932508	7	0.75
NZ_CP009287_32	32.1\|6276502\|28\|NZ_CP009287\|CRISPRCasFinder	6276502-6276529	28	NC_020527	Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence	204092-204119	7	0.75
NZ_CP009287_36	36.1\|6755311\|28\|NZ_CP009287\|CRISPRCasFinder	6755311-6755338	28	NZ_CP013110	Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence	98928-98955	7	0.75
NZ_CP009287_36	36.1\|6755311\|28\|NZ_CP009287\|CRISPRCasFinder	6755311-6755338	28	NZ_CP030198	Salmonella enterica strain SA20051401 plasmid pSA20051401.2, complete sequence	130404-130431	7	0.75
NZ_CP009287_36	36.1\|6755311\|28\|NZ_CP009287\|CRISPRCasFinder	6755311-6755338	28	NC_019126	Salmonella enterica subsp. indica plasmid pSARC14-41, complete sequence	19724-19751	7	0.75
NZ_CP009287_36	36.1\|6755311\|28\|NZ_CP009287\|CRISPRCasFinder	6755311-6755338	28	NZ_CP023071	Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence	98983-99010	7	0.75
NZ_CP009287_36	36.1\|6755311\|28\|NZ_CP009287\|CRISPRCasFinder	6755311-6755338	28	NZ_CP029232	Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence	106974-107001	7	0.75

1. spacer 2.1|655159|25|NZ_CP009287|CRISPRCasFinder matches to CP040041 (Acinetobacter baumannii strain VB958 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.84

gtgtcagcagcgggtttgcatcaag	CRISPR spacer
ttggcagaagcgggtttgcatcaac	Protospacer
 ** *** ****************

2. spacer 12.1|1476641|28|NZ_CP009287|CRISPRCasFinder matches to NC_010180 (Bacillus mycoides KBAB4 plasmid pBWB401, complete sequence) position: , mismatch: 4, identity: 0.857

ttgcccattttccacttcgcttgcggaa	CRISPR spacer
tttcccattttccacttcgcctgcgata	Protospacer
** *****************.****. *

3. spacer 25.2|4911641|26|NZ_CP009287|CRT matches to NC_011879 (Pseudarthrobacter chlorophenolicus A6 plasmid pACHL01, complete sequence) position: , mismatch: 4, identity: 0.846

agttgcaaacgtagttggagaagact	CRISPR spacer
ggctgcagacgtagttggagaagcct	Protospacer
.*.****.*************** **

4. spacer 9.1|1285109|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 5, identity: 0.821

aggctgcggagaacggggtgctggggcc	CRISPR spacer
tggcggcggaggacggggtgctggaggc	Protospacer
 *** ******.************.* *

5. spacer 9.1|1285109|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP032346 (Azospirillum brasilense strain MTCC4039 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.821

aggctgcggagaacggggtgctggggcc	CRISPR spacer
tggcggcggaggacggggtgctggaggc	Protospacer
 *** ******.************.* *

6. spacer 9.1|1285109|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP012915 (Azospirillum brasilense strain Sp 7 plasmid ABSP7_p1, complete sequence) position: , mismatch: 5, identity: 0.821

aggctgcggagaacggggtgctggggcc	CRISPR spacer
tggcggcggaggacggggtgctggaggc	Protospacer
 *** ******.************.* *

7. spacer 9.1|1285109|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP032340 (Azospirillum brasilense strain MTCC4038 plasmid p1, complete sequence) position: , mismatch: 5, identity: 0.821

aggctgcggagaacggggtgctggggcc	CRISPR spacer
tggcggcggaggacggggtgctggaggc	Protospacer
 *** ******.************.* *

8. spacer 12.1|1476641|28|NZ_CP009287|CRISPRCasFinder matches to NZ_AP019410 (Enterococcus faecium strain SMVRE20 plasmid pSMVRE20S, complete sequence) position: , mismatch: 5, identity: 0.821

ttgcccattttccacttcgcttgcggaa	CRISPR spacer
aagccaattttccacttcgattgcggta	Protospacer
  *** ************* ****** *

9. spacer 33.1|6303835|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP040096 (Pantoea sp. SO10 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.821

tgccccagcgcaccaatctccacagcct	CRISPR spacer
tgccccagcgcagcaatctgcactggtt	Protospacer
************ ****** *** * .*

10. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 6, identity: 0.786

aaaccctataattgctgattttggagag	CRISPR spacer
cgagactataatttctgatttaggagag	Protospacer
 .*  ******** ******* ******

11. spacer 34.1|6563195|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP013709 (Clostridium botulinum strain F634 plasmid pRSJ2_2, complete sequence) position: , mismatch: 6, identity: 0.786

tccctgcaaatgttgatttctaaggagt	CRISPR spacer
taagtttaaatgttgatttttaaggagt	Protospacer
*   * .************.********

12. spacer 34.1|6563195|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP013682 (Clostridium botulinum strain 1169 plasmid pRSJ8_1, complete sequence) position: , mismatch: 6, identity: 0.786

tccctgcaaatgttgatttctaaggagt	CRISPR spacer
taagtttaaatgttgatttttaaggagt	Protospacer
*   * .************.********

13. spacer 34.1|6563195|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP013295 (Clostridium botulinum strain CDC_54064 plasmid pNPD1_1, complete sequence) position: , mismatch: 6, identity: 0.786

tccctgcaaatgttgatttctaaggagt	CRISPR spacer
taagtttaaatgttgatttttaaggagt	Protospacer
*   * .************.********

14. spacer 34.1|6563195|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP013844 (Clostridium botulinum strain A634 plasmid pRSJ19_2, complete sequence) position: , mismatch: 6, identity: 0.786

tccctgcaaatgttgatttctaaggagt	CRISPR spacer
taagtttaaatgttgatttttaaggagt	Protospacer
*   * .************.********

15. spacer 36.1|6755311|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP012644 (Rufibacter tibetensis strain 1351 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.786

ttgctccagcaccatgccatccggaagt	CRISPR spacer
gttctccagcacaatgccatccgcaaac	Protospacer
 * ********* ********** **..

16. spacer 36.1|6755311|28|NZ_CP009287|CRISPRCasFinder matches to NZ_LN833432 (Acinetobacter baumannii isolate CHI-32 plasmid pNDM-32, complete sequence) position: , mismatch: 6, identity: 0.786

ttgctccagcaccatgccatccggaagt	CRISPR spacer
tcctaccagcatcatgccaaccggaagt	Protospacer
*. . ******.******* ********

17. spacer 36.1|6755311|28|NZ_CP009287|CRISPRCasFinder matches to LN997843 (Streptomyces reticuli genome assembly TUE45, plasmid : II) position: , mismatch: 6, identity: 0.786

ttgctccagcaccatgccatccggaagt	CRISPR spacer
cgggtccagcaccatgccctccggcagg	Protospacer
. * ************** ***** **

18. spacer 3.1|755492|28|NZ_CP009287|CRISPRCasFinder matches to NC_011366 (Rhizobium leguminosarum bv. trifolii WSM2304 plasmid pRLG202, complete sequence) position: , mismatch: 7, identity: 0.75

catcttcggagaacaagatcctggagca	CRISPR spacer
tcgatcaggaggacaagatcctggagca	Protospacer
.   *. ****.****************

19. spacer 12.1|1476641|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP038636 (Cupriavidus oxalaticus strain X32 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

ttgcccattttccacttcgcttgcggaa	CRISPR spacer
gtcggcattttcctcttcgcttgcggtg	Protospacer
 *   ******** ************ .

20. spacer 12.1|1476641|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 7, identity: 0.75

ttgcccattttccacttcgcttgcggaa	CRISPR spacer
taatacattttccacatcgcttgcggcg	Protospacer
* .. ********** ********** .

21. spacer 30.1|6066555|28|NZ_CP009287|CRISPRCasFinder matches to FR751545 (Pantoea phage LIMEzero complete genome) position: , mismatch: 7, identity: 0.75

ggccccagcacacggatctccgagccta	CRISPR spacer
tcagccagcacacggatgtccgcgcctt	Protospacer
    ************* **** ****

22. spacer 30.1|6066555|28|NZ_CP009287|CRISPRCasFinder matches to NC_015585 (Pantoea phage LIMEzero, complete genome) position: , mismatch: 7, identity: 0.75

ggccccagcacacggatctccgagccta	CRISPR spacer
tcagccagcacacggatgtccgcgcctt	Protospacer
    ************* **** ****

23. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NC_003037 (Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

24. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NC_017327 (Sinorhizobium meliloti SM11 plasmid pSmeSM11c, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

25. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP021798 (Sinorhizobium meliloti strain USDA1106 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

26. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NC_017324 (Sinorhizobium meliloti BL225C plasmid pSINMEB01, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

27. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP009145 (Sinorhizobium meliloti strain RMO17 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

28. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP021801 (Sinorhizobium meliloti strain USDA1021 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

29. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP021824 (Sinorhizobium meliloti strain KH46 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

30. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NC_018683 (Sinorhizobium meliloti Rm41 plasmid pSYMA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

31. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP021809 (Sinorhizobium meliloti strain Rm41 plasmid psymA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

32. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP021217 (Sinorhizobium meliloti RU11/001 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

33. spacer 32.1|6276502|28|NZ_CP009287|CRISPRCasFinder matches to NC_020527 (Sinorhizobium meliloti 2011 plasmid pSymA, complete sequence) position: , mismatch: 7, identity: 0.75

aaaccctataattgctgattttggagag	CRISPR spacer
ccaccccataattgctgattttgcaatt	Protospacer
  ****.**************** *.

34. spacer 36.1|6755311|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP013110 (Sinorhizobium americanum strain CFNEI 73 plasmid C, complete sequence) position: , mismatch: 7, identity: 0.75

ttgctccagcaccatgccatccggaagt	CRISPR spacer
gatctccagcaccatcccatccggtcgc	Protospacer
   ************ ********  *.

35. spacer 36.1|6755311|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP030198 (Salmonella enterica strain SA20051401 plasmid pSA20051401.2, complete sequence) position: , mismatch: 7, identity: 0.75

ttgctccagcaccatgccatccggaagt	CRISPR spacer
cgtctccagcaccaggccatccggcaca	Protospacer
.  *********** ********* *

36. spacer 36.1|6755311|28|NZ_CP009287|CRISPRCasFinder matches to NC_019126 (Salmonella enterica subsp. indica plasmid pSARC14-41, complete sequence) position: , mismatch: 7, identity: 0.75

ttgctccagcaccatgccatccggaagt	CRISPR spacer
cgtctccagcaccaggccatccggcaca	Protospacer
.  *********** ********* *

37. spacer 36.1|6755311|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP023071 (Sinorhizobium fredii CCBAU 83666 plasmid pSF83666b, complete sequence) position: , mismatch: 7, identity: 0.75

ttgctccagcaccatgccatccggaagt	CRISPR spacer
gatctccagcaccatgccgtccggccgc	Protospacer
   ***************.*****  *.

38. spacer 36.1|6755311|28|NZ_CP009287|CRISPRCasFinder matches to NZ_CP029232 (Sinorhizobium fredii CCBAU 45436 plasmid pSF45436b, complete sequence) position: , mismatch: 7, identity: 0.75

ttgctccagcaccatgccatccggaagt	CRISPR spacer
gatctccagcaccatgccgtccggccgc	Protospacer
   ***************.*****  *.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

449989 : 459344

Caulobacter_phage(37.5%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025709027.1\|449989_451048_+	agmatine deiminase family protein	M1I8B1	Paramecium_bursaria_Chlorella_virus	1.5e-65	39.3
WP_025709028.1\|451044_451920_+	N-carbamoylputrescine amidase	M1GUG4	Paramecium_bursaria_Chlorella_virus	1.5e-74	48.5
WP_081759043.1\|452167_452983_+	transporter substrate-binding domain-containing protein	NA	NA	NA	NA
WP_025709030.1\|453243_453891_+	amino acid ABC transporter permease	NA	NA	NA	NA
WP_025709031.1\|453906_454629_+	amino acid ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	9.9e-24	31.8
WP_025709032.1\|454786_455233_+	tellurite resistance TerB family protein	A0A1Y0T181	Sinorhizobium_phage	1.8e-07	30.0
WP_025709033.1\|455356_455953_+	TerD family protein	K4JRX3	Caulobacter_phage	9.9e-22	32.2
WP_025709034.1\|455982_456558_+	TerD family protein	K4JRX3	Caulobacter_phage	6.4e-26	35.4
WP_025709035.1\|456609_457191_+	TerD family protein	K4JRX3	Caulobacter_phage	5.9e-27	37.3
WP_025709036.1\|457273_458578_+	TerD family protein	NA	NA	NA	NA
WP_025709037.1\|458603_459344_+	TerC family protein	S5MAL1	Bacillus_phage	3.7e-58	52.3

DBSCAN-SWA_2

836957 : 848320

Mollivirus(25.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025707973.1\|836957_838253_+	adenylosuccinate lyase	A0A2H4UUU6	Bodo_saltans_virus	1.1e-22	27.9
WP_025707974.1\|838628_839519_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A0M4JBD3	Mollivirus	2.2e-41	34.9
WP_019913657.1\|839658_839904_+	phosphoribosylformylglycinamidine synthase subunit PurS	A0A0E3FJ99	Synechococcus_phage	2.2e-07	36.7
WP_025707975.1\|839909_840599_+	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_025707976.1\|840576_842823_+	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	6.1e-165	42.3
WP_025707977.1\|842807_844304_+	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	2.2e-49	31.7
WP_042266043.1\|844892_845933_+	phosphoribosylformylglycinamidine cyclo-ligase	Q58MH8	Prochlorococcus_phage	3.6e-67	44.7
WP_025707809.1\|845932_846547_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	1.3e-24	37.1
WP_025707810.1\|846772_848320_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	3.4e-74	50.7

DBSCAN-SWA_3

2576372 : 2586820

Bacillus_phage(66.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025708183.1\|2576372_2578166_+	HAMP domain-containing protein	W8CYF6	Bacillus_phage	4.6e-38	34.2
WP_025708182.1\|2578369_2579098_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.7e-36	35.2
WP_020427951.1\|2579325_2580081_+	phosphate ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	3.9e-15	32.4
WP_042266521.1\|2580148_2580808_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_025703504.1\|2581141_2583814_+	DNA polymerase I	A0A1B1IST8	uncultured_Mediterranean_phage	1.7e-44	34.3
WP_025703503.1\|2583865_2584708_+	DNA-formamidopyrimidine glycosylase	A0A127AWE5	Bacillus_phage	2.0e-20	29.0
WP_025703502.1\|2584898_2585654_+	manganese efflux pump	NA	NA	NA	NA
WP_025703501.1\|2585663_2586260_+	dephospho-CoA kinase	NA	NA	NA	NA
WP_025703500.1\|2586256_2586820_+	lytic transglycosylase domain-containing protein	K4NWI2	Pseudomonas_phage	7.0e-17	42.3

DBSCAN-SWA_4

4261181 : 4271377

Paenibacillus_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025706244.1\|4261181_4262006_-	hypothetical protein	A0A2I7RWZ3	Vibrio_phage	9.4e-63	44.6
WP_025706243.1\|4262056_4263559_-	DNA cytosine methyltransferase	A0A1I9KFD6	Aeromonas_phage	2.4e-112	53.1
WP_155990421.1\|4263555_4263696_-	hypothetical protein	NA	NA	NA	NA
WP_155990420.1\|4263692_4263857_-	hypothetical protein	NA	NA	NA	NA
WP_025706242.1\|4263871_4264501_-	hypothetical protein	A0A0C5ABQ1	Bacteriophage	5.0e-24	39.3
WP_025706241.1\|4264505_4264697_-	hypothetical protein	A0A0C5AN17	Bacteriophage	4.0e-09	51.6
WP_025706240.1\|4264697_4264958_-	hypothetical protein	NA	NA	NA	NA
WP_025706239.1\|4264929_4266279_-	hypothetical protein	W8EEZ1	Geobacillus_phage	5.5e-60	33.7
WP_162165085.1\|4266268_4266658_-	hypothetical protein	NA	NA	NA	NA
WP_025706237.1\|4266590_4267514_-	replication protein	A0A290FZL4	Caldibacillus_phage	5.0e-20	46.2
WP_025706236.1\|4267532_4267739_-	hypothetical protein	NA	NA	NA	NA
WP_081758860.1\|4268184_4269012_-	PD-(D/E)XK nuclease-like domain-containing protein	R9TMF6	Paenibacillus_phage	2.2e-99	64.7
WP_025706233.1\|4268980_4269742_-	recombinase RecT	R9TNH4	Paenibacillus_phage	8.6e-95	69.4
WP_025706231.1\|4269745_4271377_-	AAA family ATPase	R9TQJ2	Paenibacillus_phage	1.3e-204	68.1

DBSCAN-SWA_5

4284944 : 4319629

Bacillus_phage(33.33%)

capsid,portal,tail,head,transposase,protease,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025708625.1\|4284944_4285133_+	type II toxin-antitoxin system HicA family toxin	A0A1L2JY37	Aeribacillus_phage	3.3e-16	59.7
WP_025708627.1\|4285172_4285595_+	type II toxin-antitoxin system HicB family antitoxin	A0A1L2JY34	Aeribacillus_phage	2.8e-31	50.0
WP_025708629.1\|4285814_4286060_+	hypothetical protein	NA	NA	NA	NA
WP_025708631.1\|4286056_4286539_-	hypothetical protein	NA	NA	NA	NA
WP_025708634.1\|4286613_4287159_+	hypothetical protein	NA	NA	NA	NA
WP_025708636.1\|4287155_4289189_-\|tail	phage tail protein	A0A0U4B063	Bacillus_phage	3.9e-126	47.4
WP_025708638.1\|4289181_4289793_-	macro domain-containing protein	A0A0M4QWS3	Salmonella_phage	1.1e-36	41.0
WP_025708639.1\|4289804_4290323_-\|tail	phage tail family protein	NA	NA	NA	NA
WP_025708641.1\|4290398_4290614_-	hypothetical protein	R9TLP0	Paenibacillus_phage	3.8e-16	59.7
WP_025708643.1\|4290616_4291384_-	M15 family metallopeptidase	A0A127AWA8	Bacillus_phage	7.2e-41	57.2
WP_156124072.1\|4291370_4291733_-	hypothetical protein	NA	NA	NA	NA
WP_025708649.1\|4291937_4292237_-	hypothetical protein	NA	NA	NA	NA
WP_155990542.1\|4292330_4295885_-	hypothetical protein	S6B1J7	Thermus_phage	7.0e-22	48.8
WP_025708653.1\|4295991_4296387_-	hypothetical protein	H6BJ44	Methylophilales_phage	2.5e-29	52.3
WP_025708655.1\|4296399_4296993_-\|tail	phage tail family protein	A0A290FZP5	Caldibacillus_phage	2.9e-21	41.1
WP_025708657.1\|4296989_4301447_-\|tail	phage tail tape measure protein	M1PKM6	Streptococcus_phage	1.7e-102	50.0
WP_155990543.1\|4301443_4301716_-	hypothetical protein	NA	NA	NA	NA
WP_025708661.1\|4301739_4302087_-	hypothetical protein	NA	NA	NA	NA
WP_025708662.1\|4302092_4302887_-	hypothetical protein	NA	NA	NA	NA
WP_025708664.1\|4302892_4303273_-	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_025708665.1\|4303272_4303698_-	HK97 gp10 family phage protein	NA	NA	NA	NA
WP_025708666.1\|4303697_4304027_-\|head	phage head closure protein	A0A1J0GUY4	Halomonas_phage	2.0e-08	33.3
WP_025708668.1\|4304023_4304233_-	hypothetical protein	NA	NA	NA	NA
WP_025708669.1\|4304239_4304506_-\|head,tail	phage gp6-like head-tail connector protein	A0A2H4J6E5	uncultured_Caudovirales_phage	3.3e-09	38.6
WP_025708671.1\|4304524_4304749_-	hypothetical protein	NA	NA	NA	NA
WP_025708673.1\|4304802_4305948_-\|capsid	phage major capsid protein	A0A1B1P7R4	Bacillus_phage	8.9e-136	68.1
WP_025708675.1\|4305940_4306687_-\|protease	Clp protease ClpP	A0A2I7SCY8	Paenibacillus_phage	1.4e-60	53.2
WP_025708677.1\|4306679_4307897_-\|portal	phage portal protein	A0A0U3SQF0	Bacillus_phage	9.2e-99	49.2
WP_081759018.1\|4307906_4309640_-\|terminase	terminase large subunit	A0A1B1P7R3	Bacillus_phage	2.5e-214	62.5
WP_025708679.1\|4309590_4309971_-\|terminase	P27 family phage terminase small subunit	NA	NA	NA	NA
WP_025708681.1\|4310250_4310607_-	HNH endonuclease	Q2I8B2	Bacillus_phage	2.3e-21	60.2
WP_025708682.1\|4310590_4310944_-	hypothetical protein	NA	NA	NA	NA
WP_025708683.1\|4310949_4311279_-	hypothetical protein	A0A0K2CZ01	Paenibacillus_phage	3.7e-10	35.1
WP_025708685.1\|4311489_4312071_-	hypothetical protein	A0A2I7R1C1	Vibrio_phage	1.6e-24	38.6
WP_025708687.1\|4312161_4312506_-	hypothetical protein	NA	NA	NA	NA
WP_025708689.1\|4312512_4312767_-	hypothetical protein	A0A0S2MVH6	Bacillus_phage	9.4e-06	34.3
WP_081759020.1\|4312837_4313083_-	sporulation protein Cse60	NA	NA	NA	NA
WP_025708694.1\|4314205_4315714_+	recombinase family protein	A0A0N9RZT8	Staphylococcus_phage	1.4e-48	29.2
WP_081759022.1\|4315791_4315953_-	DUF255 domain-containing protein	NA	NA	NA	NA
WP_025708695.1\|4316210_4317125_-	restriction endonuclease	NA	NA	NA	NA
WP_081954756.1\|4318271_4318439_-	DUF255 domain-containing protein	NA	NA	NA	NA
WP_081758944.1\|4318575_4318812_-	hypothetical protein	NA	NA	NA	NA
WP_042267002.1\|4319110_4319629_-\|transposase	transposase	NA	NA	NA	NA

DBSCAN-SWA_6

4689753 : 4698864

Staphylococcus_phage(57.14%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_042267101.1\|4689753_4690962_-	D-alanyl-D-alanine carboxypeptidase	A0A1P8VVG5	Erythrobacter_phage	7.4e-08	34.0
WP_025706964.1\|4691131_4691650_-	GerW family sporulation protein	NA	NA	NA	NA
WP_025706963.1\|4691883_4692774_+	hypothetical protein	NA	NA	NA	NA
WP_025706962.1\|4692857_4693580_-	DUF2953 domain-containing protein	NA	NA	NA	NA
WP_025706961.1\|4693746_4694352_-	SMC-Scp complex subunit ScpB	A0A1B1IVT7	uncultured_Mediterranean_phage	7.0e-15	30.3
WP_025706960.1\|4694320_4695112_-	segregation/condensation protein A	A0A1B1IVW1	uncultured_Mediterranean_phage	1.1e-07	35.7
WP_025706959.1\|4695247_4695715_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	8.0e-43	57.3
WP_025706958.1\|4695753_4697007_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	1.7e-116	53.2
WP_025706957.1\|4697071_4697740_-	riboflavin synthase	A0A2H4PQS5	Staphylococcus_phage	2.9e-38	40.3
WP_025706956.1\|4697763_4698864_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	2.5e-55	36.9

DBSCAN-SWA_7

5300802 : 5347296

Paenibacillus_phage(43.75%)

portal,tail,integrase,terminase,holin

attL 5287816:5287830|attR 5347724:5347737

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
5287816:5287830	attL	NA	NA	NA	NA
WP_025705943.1\|5300802_5302014_+\|integrase	site-specific integrase	A0A2R2ZGM9	Clostridioides_phage	2.8e-31	33.6
5287816:5287830	attL	NA	NA	NA	NA
WP_155990406.1\|5302389_5302542_-	hypothetical protein	NA	NA	NA	NA
WP_025705944.1\|5302729_5303143_-	LytTR family transcriptional regulator DNA-binding domain-containing protein	NA	NA	NA	NA
WP_081758845.1\|5303254_5303485_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_025705945.1\|5303702_5304083_-	hypothetical protein	NA	NA	NA	NA
WP_081758846.1\|5304104_5304248_-	cyclic lactone autoinducer peptide	NA	NA	NA	NA
WP_025705946.1\|5304244_5304772_-	accessory gene regulator B family protein	A0A0K2CZ30	Paenibacillus_phage	4.5e-10	30.1
WP_025705947.1\|5304764_5305397_-	hypothetical protein	NA	NA	NA	NA
5305225:5305239	attR	NA	NA	NA	NA
WP_025705948.1\|5305516_5305762_-	hypothetical protein	NA	NA	NA	NA
5305225:5305239	attR	NA	NA	NA	NA
WP_025705949.1\|5305758_5306001_-	hypothetical protein	NA	NA	NA	NA
WP_025705950.1\|5306167_5306374_-	hypothetical protein	NA	NA	NA	NA
WP_025705951.1\|5306436_5306628_-	hypothetical protein	NA	NA	NA	NA
WP_025705952.1\|5306781_5307009_+	helix-turn-helix transcriptional regulator	A0A2I7SC05	Paenibacillus_phage	7.1e-21	62.0
WP_155990407.1\|5307176_5307764_+	hypothetical protein	NA	NA	NA	NA
WP_051424734.1\|5307782_5308139_+	hypothetical protein	NA	NA	NA	NA
WP_081758847.1\|5308464_5308662_-	hypothetical protein	A0A2I7SCV7	Paenibacillus_phage	3.0e-07	47.4
WP_052415725.1\|5308874_5310104_+	hypothetical protein	NA	NA	NA	NA
WP_025706530.1\|5310147_5310366_-	hypothetical protein	NA	NA	NA	NA
WP_052415726.1\|5311718_5313089_-	hypothetical protein	A0A0K2CNX3	Brevibacillus_phage	1.4e-10	43.2
WP_025707291.1\|5313308_5314037_-	hypothetical protein	NA	NA	NA	NA
WP_025707292.1\|5314297_5315488_-	hypothetical protein	NA	NA	NA	NA
WP_025707293.1\|5315611_5315827_-	hypothetical protein	R9TLP0	Paenibacillus_phage	2.5e-15	56.5
WP_025707294.1\|5315826_5316546_-	N-acetylmuramoyl-L-alanine amidase	R9TQ04	Paenibacillus_phage	2.2e-79	63.4
WP_025707295.1\|5316556_5317066_-\|holin	phage holin family protein	D9ZNF2	Clostridium_phage	7.7e-15	40.0
WP_025707296.1\|5317223_5317730_-	hypothetical protein	NA	NA	NA	NA
WP_025707297.1\|5318004_5318214_-	hypothetical protein	NA	NA	NA	NA
WP_155990487.1\|5318437_5318977_-	hypothetical protein	NA	NA	NA	NA
WP_025707299.1\|5319041_5319593_-	hypothetical protein	NA	NA	NA	NA
WP_042268283.1\|5319659_5321819_-\|tail	phage tail protein	A0A2P1JTV8	Anoxybacillus_phage	3.4e-19	25.2
WP_025707301.1\|5322137_5322485_-	hypothetical protein	NA	NA	NA	NA
WP_025707302.1\|5322498_5323293_-	hypothetical protein	NA	NA	NA	NA
WP_047171582.1\|5323308_5324166_-	hypothetical protein	A0A1B0XUH9	Freshwater_phage	3.3e-18	48.6
WP_042267271.1\|5324181_5324961_-	hypothetical protein	NA	NA	NA	NA
WP_025706325.1\|5324980_5325784_-\|tail	phage tail family protein	NA	NA	NA	NA
WP_081758864.1\|5325784_5331244_-\|tail	phage tail tape measure protein	NA	NA	NA	NA
WP_042267274.1\|5331649_5332018_-	hypothetical protein	NA	NA	NA	NA
WP_025706328.1\|5332045_5332834_-	hypothetical protein	NA	NA	NA	NA
WP_025706330.1\|5332878_5333067_-	hypothetical protein	NA	NA	NA	NA
WP_025706331.1\|5333189_5333627_-	hypothetical protein	NA	NA	NA	NA
WP_025706332.1\|5333623_5334202_-	hypothetical protein	NA	NA	NA	NA
WP_025706333.1\|5334198_5334774_-	hypothetical protein	NA	NA	NA	NA
WP_025706334.1\|5334782_5335346_-	hypothetical protein	NA	NA	NA	NA
WP_025706335.1\|5335342_5335666_-	hypothetical protein	NA	NA	NA	NA
WP_025706337.1\|5336723_5337773_-	hypothetical protein	NA	NA	NA	NA
WP_025706338.1\|5337814_5339146_-\|portal	phage portal protein	NA	NA	NA	NA
WP_025706339.1\|5339326_5340292_-	DUF4062 domain-containing protein	NA	NA	NA	NA
WP_025706340.1\|5340361_5341771_-\|terminase	terminase	G1JWB7	Mycobacterium_phage	3.3e-23	24.6
WP_025706341.1\|5341754_5342522_-	hypothetical protein	D0R7J0	Paenibacillus_phage	4.8e-53	69.1
WP_025706342.1\|5342783_5343335_-\|integrase	tyrosine-type recombinase/integrase	D2XR58	Bacillus_phage	2.2e-47	51.9
WP_155990426.1\|5343659_5344073_+	hypothetical protein	A0A0K2CYX7	Paenibacillus_phage	1.7e-20	38.5
WP_025706344.1\|5344281_5344590_-	hypothetical protein	NA	NA	NA	NA
WP_025706345.1\|5345151_5345808_-	hypothetical protein	NA	NA	NA	NA
WP_155990427.1\|5345832_5345997_-	hypothetical protein	NA	NA	NA	NA
WP_025706346.1\|5346116_5346452_+	hypothetical protein	NA	NA	NA	NA
WP_155990428.1\|5346525_5346885_-	hypothetical protein	A0A0A7AR03	Bacillus_phage	8.6e-29	51.7
WP_025706348.1\|5346933_5347296_-	hypothetical protein	Q5YA89	Bacillus_phage	3.0e-13	36.7
5347724:5347737	attR	NA	NA	NA	NA

DBSCAN-SWA_8

5351835 : 5360902

Paenibacillus_phage(42.86%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025704843.1\|5351835_5352513_-	hypothetical protein	D0R7I8	Paenibacillus_phage	6.3e-57	56.5
WP_155990363.1\|5352596_5352770_-	hypothetical protein	NA	NA	NA	NA
WP_025704842.1\|5352936_5353143_+	helix-turn-helix transcriptional regulator	D0R7I7	Paenibacillus_phage	3.3e-09	73.2
WP_025704841.1\|5353148_5353337_-	hypothetical protein	NA	NA	NA	NA
WP_025704840.1\|5353348_5355397_-	DNA cytosine methyltransferase	Q8W6H6	Sinorhizobium_phage	1.2e-77	48.0
WP_036704197.1\|5355393_5355582_-	hypothetical protein	NA	NA	NA	NA
WP_025704838.1\|5355670_5356798_-	DNA polymerase III subunit beta	D0R7I4	Paenibacillus_phage	2.1e-36	47.5
WP_025704837.1\|5356803_5357748_-	primosomal protein DnaI	S5MU12	Brevibacillus_phage	1.8e-54	39.1
WP_025704836.1\|5357748_5358744_-	phage replisome organizer N-terminal domain-containing protein	Q7Y4K5	Streptococcus_phage	2.3e-39	52.7
WP_025704834.1\|5358751_5359219_-	hypothetical protein	NA	NA	NA	NA
WP_155990362.1\|5359221_5359371_-	hypothetical protein	NA	NA	NA	NA
WP_025704833.1\|5359367_5359781_-	ORF6C domain-containing protein	NA	NA	NA	NA
WP_025704832.1\|5359780_5360902_-	ParB N-terminal domain-containing protein	A0A1D6Z271	Staphylococcus_phage	3.8e-38	46.4

DBSCAN-SWA_9

6387252 : 6404101

Thermus_phage(29.41%)

portal,tail,plate

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_025705075.1\|6387252_6387951_-	M15 family metallopeptidase	A0A127AWA8	Bacillus_phage	2.3e-41	55.3
WP_025705076.1\|6387922_6388315_-	hypothetical protein	NA	NA	NA	NA
WP_025705077.1\|6388298_6388499_-	hypothetical protein	NA	NA	NA	NA
WP_025705078.1\|6388500_6388809_-	hypothetical protein	NA	NA	NA	NA
WP_025705079.1\|6389276_6389750_-	hypothetical protein	NA	NA	NA	NA
WP_025705080.1\|6389764_6391342_-	hypothetical protein	S6B1J7	Thermus_phage	3.3e-08	33.7
WP_025705081.1\|6391353_6391965_-	YmfQ family protein	S6BFJ0	Thermus_phage	1.1e-44	52.0
WP_025705083.1\|6391967_6392303_-	hypothetical protein	A0A0A7S181	Clostridium_phage	5.6e-06	65.7
WP_042267516.1\|6392315_6393338_-	DUF2793 domain-containing protein	A0A1X9IAR6	Xanthomonas_phage	5.9e-14	45.8
WP_025705224.1\|6393339_6393753_-	hypothetical protein	A0A0A7S1G0	Clostridium_phage	1.3e-31	54.5
WP_025705225.1\|6393757_6394816_-\|plate	baseplate J/gp47 family protein	S6AVU3	Thermus_phage	1.3e-96	53.4
WP_025705226.1\|6394808_6395240_-	DUF2634 domain-containing protein	S6B9X2	Thermus_phage	4.7e-21	41.7
WP_025705227.1\|6395236_6395533_-	DUF2577 domain-containing protein	A0A0A7RTJ2	Clostridium_phage	3.4e-15	41.3
WP_025705228.1\|6395538_6396501_-	hypothetical protein	S5MNC9	Brevibacillus_phage	3.5e-85	46.9
WP_025705230.1\|6396513_6397215_-	LysM peptidoglycan-binding domain-containing protein	S5MUH0	Brevibacillus_phage	8.6e-49	45.5
WP_025705231.1\|6397216_6399178_-	hypothetical protein	S5MNW9	Brevibacillus_phage	1.4e-19	28.5
WP_025705232.1\|6399377_6399800_-\|portal	phage portal protein	A0A0A7RTY8	Clostridium_phage	7.3e-11	38.3
WP_025705233.1\|6399960_6400425_-\|tail	phage tail tube protein	A0A0K2CNG3	Brevibacillus_phage	1.1e-47	59.6
WP_042267517.1\|6400426_6401749_-\|tail	phage tail sheath family protein	S5MNC1	Brevibacillus_phage	2.8e-109	48.6
WP_167337240.1\|6401748_6401925_-	hypothetical protein	NA	NA	NA	NA
WP_025706745.1\|6401921_6402335_-	hypothetical protein	NA	NA	NA	NA
WP_155990450.1\|6402435_6402597_-	hypothetical protein	NA	NA	NA	NA
WP_155990452.1\|6402825_6403344_-	transcriptional regulator	A0A0C5AN03	Paenibacillus_phage	2.4e-40	61.2
WP_025706747.1\|6403651_6404101_+	helix-turn-helix domain-containing protein	S6C481	Thermus_phage	2.6e-22	41.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009287

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information