CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009454	Pantoea rwandensis strain ND04 chromosome, complete genome	2 crisprs	DEDDh,cas3,cas14j,PD-DExK,DinG	0	0	7	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009454_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009454_1

3340887-3340996

Orphan

Consensus_repeat	Method
GCTATCGCCAGGGTTTCTGCATCGGCGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009454_1

>merge|NZ_CP009454|1|3340887-3340996|CRISPRCasFinder
GCTATCGCCAGGGTTTCTGCATCGGCGATGTCATACACCGTTTCATCACTGCGCTGCGCCGTATTTCGCCAGTAATGCTCGGGCTATCGCCAGGGTTTCTGCATCGGCGA

>NZ_CP009454|1|1|3340887-3340996|CRISPRCasFinder
GCTATCGCCAGGGTTTCTGCATCGGCGA	TGTCATACACCGTTTCATCACTGCGCTGCGCCGTATTTCGCCAGTAATGCTCGG
GCTATCGCCAGGGTTTCTGCATCGGCGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009454.1\|WP_038647847.1\|3334884_3335106_+\|cold-shock-like-protein-CspD	unknown	unknown	gnl\|CDD\|184960
NZ_CP009454.1\|WP_038647853.1\|3337978_3339700_+\|ubiquinone-dependent-pyruvate-dehydrogenase	unknown	unknown	gnl\|CDD\|181661
NZ_CP009454.1\|WP_038647861.1\|3342173_3342713_+\|lipoprotein	unknown	unknown	gnl\|CDD\|182526
NZ_CP009454.1\|WP_038647863.1\|3343697_3344429_+\|arginine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|184969
NZ_CP009454.1\|WP_038647849.1\|3335195_3336836_-\|ATP-dependent-endonuclease	unknown	unknown	gnl\|CDD\|226121
NZ_CP009454.1\|WP_038647871.1\|3346803_3347940_-\|23S-rRNA-(uracil(747)-C(5))-methyltransferase-RlmC	unknown	unknown	gnl\|CDD\|131140
NZ_CP009454.1\|WP_002211347.1\|3331592_3331811_+\|translation-initiation-factor-IF-1	unknown	unknown	gnl\|CDD\|178954
NZ_CP009454.1\|WP_038647855.1\|3339769_3340768_+\|low-specificity-L-threonine-aldolase	unknown	unknown	gnl\|CDD\|236710
NZ_CP009454.1\|WP_038647867.1\|3345152_3345821_+\|arginine-ABC-transporter-permease-ArtM	unknown	unknown	gnl\|CDD\|182978
NZ_CP009454.1\|WP_038647851.1\|3336971_3337868_+\|lysine-exporter-LysO-family-protein	unknown	unknown	gnl\|CDD\|225287
NZ_CP009454.1\|WP_038647859.1\|3341755_3342076_-\|heavy-metal-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|179490
NZ_CP009454.1\|WP_034820712.1\|3349493_3350450_-\|putrescine-ABC-transporter-permease-PotH	unknown	unknown	gnl\|CDD\|182646
NZ_CP009454.1\|WP_034820663.1\|3334241_3334562_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP009454.1\|WP_038647865.1\|3344435_3345149_+\|arginine-ABC-transporter-permease-ArtQ	unknown	unknown	gnl\|CDD\|182979
NZ_CP009454.1\|WP_038647873.1\|3347988_3348453_-\|YbjO-family-protein	unknown	unknown	gnl\|CDD\|371232
NZ_CP009454.1\|WP_038647869.1\|3346008_3346740_+\|arginine-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|270418
NZ_CP009454.1\|WP_038647845.1\|3328786_3330517_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	unknown	unknown	gnl\|CDD\|236865
NZ_CP009454.1\|WP_038647875.1\|3348651_3349497_-\|putrescine-ABC-transporter-permease-PotI	unknown	unknown	gnl\|CDD\|182574
NZ_CP009454.1\|WP_034820657.1\|3330550_3331243_+\|leucyl/phenylalanyl-tRNA--protein-transferase	unknown	unknown	gnl\|CDD\|234720
NZ_CP009454.1\|WP_034820660.1\|3331906_3334186_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	unknown	unknown	gnl\|CDD\|236828

Protein	Function_ID	Function_description	E-value
NZ_CP009454.1\|WP_038647847.1\|3334884_3335106_+\|cold-shock-like-protein-CspD	gnl\|CDD\|184960	PRK14998, PRK14998, cold shock-like protein CspD; Provisional.	4.10264e-42
NZ_CP009454.1\|WP_038647853.1\|3337978_3339700_+\|ubiquinone-dependent-pyruvate-dehydrogenase	gnl\|CDD\|181661	PRK09124, PRK09124, ubiquinone-dependent pyruvate dehydrogenase.	0
NZ_CP009454.1\|WP_038647861.1\|3342173_3342713_+\|lipoprotein	gnl\|CDD\|182526	PRK10533, PRK10533, putative lipoprotein; Provisional.	3.10522e-89
NZ_CP009454.1\|WP_038647863.1\|3343697_3344429_+\|arginine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|184969	PRK15007, PRK15007, arginine ABC transporter substrate-binding protein.	7.44858e-155
NZ_CP009454.1\|WP_038647849.1\|3335195_3336836_-\|ATP-dependent-endonuclease	gnl\|CDD\|226121	COG3593, COG3593, Predicted ATP-dependent endonuclease of the OLD family [DNA replication, recombination, and repair].	1.15361e-147
NZ_CP009454.1\|WP_038647871.1\|3346803_3347940_-\|23S-rRNA-(uracil(747)-C(5))-methyltransferase-RlmC	gnl\|CDD\|131140	TIGR02085, 23S_rRNA_uracil747-C5-methyltransferase_RlmC, 23S rRNA (uracil-5-)-methyltransferase RumB. This family consists of RNA methyltransferases designated RumB, formerly YbjF. Members act on 23S rRNA U747 and the equivalent position in other proteobacterial species. This family is homologous to the other 23S rRNA methyltransferase RumA and to the tRNA methyltransferase TrmA. [Protein synthesis, tRNA and rRNA base modification].	0
NZ_CP009454.1\|WP_002211347.1\|3331592_3331811_+\|translation-initiation-factor-IF-1	gnl\|CDD\|178954	PRK00276, infA, translation initiation factor IF-1; Validated.	2.9822e-48
NZ_CP009454.1\|WP_038647855.1\|3339769_3340768_+\|low-specificity-L-threonine-aldolase	gnl\|CDD\|236710	PRK10534, PRK10534, L-threonine aldolase; Provisional.	0
NZ_CP009454.1\|WP_038647867.1\|3345152_3345821_+\|arginine-ABC-transporter-permease-ArtM	gnl\|CDD\|182978	PRK11122, artM, arginine ABC transporter permease ArtM.	2.18179e-145
NZ_CP009454.1\|WP_038647851.1\|3336971_3337868_+\|lysine-exporter-LysO-family-protein	gnl\|CDD\|225287	COG2431, COG2431, Predicted membrane protein [Function unknown].	9.94354e-95
NZ_CP009454.1\|WP_038647859.1\|3341755_3342076_-\|heavy-metal-binding-domain-containing-protein	gnl\|CDD\|179490	PRK02877, PRK02877, hypothetical protein; Provisional.	1.93679e-65
NZ_CP009454.1\|WP_034820712.1\|3349493_3350450_-\|putrescine-ABC-transporter-permease-PotH	gnl\|CDD\|182646	PRK10683, PRK10683, putrescine transporter subunit: membrane component of ABC superfamily; Provisional.	0
NZ_CP009454.1\|WP_034820663.1\|3334241_3334562_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	5.81503e-51
NZ_CP009454.1\|WP_038647865.1\|3344435_3345149_+\|arginine-ABC-transporter-permease-ArtQ	gnl\|CDD\|182979	PRK11123, PRK11123, arginine ABC transporter permease ArtQ.	2.33847e-156
NZ_CP009454.1\|WP_038647873.1\|3347988_3348453_-\|YbjO-family-protein	gnl\|CDD\|371232	pfam10767, DUF2593, Protein of unknown function (DUF2593). This family of proteins appear to be restricted to Enterobacteriaceae. Some members in the family are annotated as YbjO however currently there is no known function.	2.45889e-77
NZ_CP009454.1\|WP_038647869.1\|3346008_3346740_+\|arginine-ABC-transporter-substrate-binding-protein	gnl\|CDD\|270418	cd13700, PBP2_Arg_STM4351, Substrate binding domain of arginine-specific ABC transporter; type 2 periplasmic-binding protein fold. This group includes domains similar to Escherichia coli arginine third transport system. STM4351 is the high arginine specific periplasmic-binding protein of ABC transport system. STM4351 belongs to the type 2 periplasmic-binding fold protein (PBP2) superfamily, whose members are involved in chemotaxis and uptake of nutrients and other small molecules from the extracellular space as a primary receptor. PBP2 typically comprises of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two receptor cytoplasmically-located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	2.57867e-125
NZ_CP009454.1\|WP_038647845.1\|3328786_3330517_+\|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC	gnl\|CDD\|236865	PRK11160, PRK11160, cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed.	0
NZ_CP009454.1\|WP_038647875.1\|3348651_3349497_-\|putrescine-ABC-transporter-permease-PotI	gnl\|CDD\|182574	PRK10592, PRK10592, putrescine transporter subunit: membrane component of ABC superfamily; Provisional.	0
NZ_CP009454.1\|WP_034820657.1\|3330550_3331243_+\|leucyl/phenylalanyl-tRNA--protein-transferase	gnl\|CDD\|234720	PRK00301, aat, leucyl/phenylalanyl-tRNA--protein transferase; Reviewed.	1.74123e-138
NZ_CP009454.1\|WP_034820660.1\|3331906_3334186_-\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA	gnl\|CDD\|236828	PRK11034, clpA, ATP-dependent Clp protease ATP-binding subunit; Provisional.	0

>NZ_CP009454.1|WP_038647855.1|3339769_3340768_+|low-specificity-L-threonine-aldolase
MIDLRSDTVTRPSAAMLDAMMAAETGDDVYRDDPTVNALEREAARLSGKAAALFFPTGTQANLVALLCHCQRGDEYIVGQQAHNYKYEAGGAAVLGSIQPQPISHAEDGSLPLADIVAAIKPDDIHFARTRLLSLENTHHGKVLSQSYLEQAWKLTREHKLALHIDGARIFNAVVAQNVELKDIARYCDTLTICLSKGLGTPVGSLLCGDEAYIEQARRWRKMTGGGMRQAGILAAAGLYALKHNVARLKEDHDNAAWLAEQLSAIGVEVLNQHTNMLFVKVPADQVDALKSWMHSGDVLMSVGPVTRIATHLDVSRQDLQRLVAHWQAFLA
>NZ_CP009454.1|WP_038647853.1|3337978_3339700_+|ubiquinone-dependent-pyruvate-dehydrogenase
MKQTVAALLAKTLESAGVKRIWGVTGDSLNGLNDSLNRMGTIEWMPTRHEEVAAFAAGAEAQISGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHIPSSEIGSGYFQETHPEELFRECSHYCELVSNPEQLPQVLGIAMRKAILNRGVSVIVLPGDIALKPAPEGARSEWYPPQLPHVVPNASEIARLADTLNHAKNITLMCGSGCAGAHAEVVQLAETLKAPVVHAMRGKEHIEYDNPYDVGMTGLIGFSSGYHAMMNADTLVLLGTQFPYRPFYPADAHIIQIDINPASLGAHSHVNMALIGDIKATLQALQPQLASKSDRHHLDSALEHYAEARKGLDDLATANDKQAIHPQYLAQQISHYAAEDAIFTCDVGTPTVWAARYLKMNGKRRLLGSFNHGSMANAMPQALGAQAIDKQRQVVALCGDGGFSMLMGDFISVAQLKLPVKLVIFNNSVLGFVAMEMKAGGYLTDGTDLENPDFAAIATACGIKGIRVEKASELNSALEQAFAHDGPVLINAITAKEELSMPPQIKAEQAKGFSLYMLRAILNGRGDEIVELAKTNWLR
>NZ_CP009454.1|WP_038647851.1|3336971_3337868_+|lysine-exporter-LysO-family-protein
MYGLIIILLPLIAGYLLHVTRANLLRGVARLLSALVYIILFFMGTSLAFLDNLSSNLLTIFHTALISMLCILACSLMAFWLLEKRVPWHHPHKQQALPSRLHMALESLKLCGSVLGGFLLGLSQWSILRHASTISEYALMLMLFLVGIQLRSSGMTLRQITLNRRGMLVAAVSLCSALIGGMLAALWLDLPIKTGLALASGFGWYSLSGILMTESFGPVIGSAAFFNDLLRELITIMLIPLLISRQRSMTLGLSGATSMDFTLPILQRTGGMEIVPAAIVHGFIMSLLAPILIALFSA
>NZ_CP009454.1|WP_038647849.1|3335195_3336836_-|ATP-dependent-endonuclease
MFLEHIDIRGFRGINRLSLPLTDTNLLIGENAWGKSSLLDALTLLLAPAAEPYQFTEHDFHFPPGDLEARLRQLQLVFRFRAQAGDDEAVFQPFWQRDENGRFIRFSTRARRNEHGVKTTWRFIDQNGDVLAMEGTEAALAHLRAFYPVLRLRDARFGRRGRHSSIDADRRATTLSELSQEVEKLTRDLVVQPQNLSDDLLRQGLHTMQQLLEHYFLVQQPGVSAARVAPELRDGSQGWRSLDKLNHLIAGTESRSRKVILLRMFSLLIQAHGNEALPPGAHPLLLVEDPETRLHPIMLSVAWNLLDLMPLQKITTTNSGELLSQVPLENICRLVREPTRVAAWRIGPEGLSAEESRRIGFHIRVNRPSALFARCWLLVEGETEVWIINELARQRGYHFAAEGVKVIEFAQSGLKPLLKFARRMGIAWHVLTDGDEAGNKYAASARSQLQEHERQDDHLTQFPAPDIEHFLYKQGFSDVYHDMAHLPLNVPMNARRIITKAIHHSSKPELAIAVAMAAAERGPQAIPALLDQLFARVMWLARGRAD
>NZ_CP009454.1|WP_038647847.1|3334884_3335106_+|cold-shock-like-protein-CspD
METGTVKWFNNAKGFGFICPIGGGDDIFAHYSTIQMEGYRTLKAGQQVQFDVHEGPKGNHASLIVPCEVTQVA
>NZ_CP009454.1|WP_034820663.1|3334241_3334562_-|ATP-dependent-Clp-protease-adapter-ClpS
MANTNDWLNFEHLAEDKVREGLKPPSMYKVILNNDDYTPMEFVIDVLQKFFSYDVERATQLMLKVHYHGKAICGVFTAEVAETKVAQVNNYARENEHPLLCTLEKA
>NZ_CP009454.1|WP_034820660.1|3331906_3334186_-|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpA
MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACTVDIVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRSEVAGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPGQPQNNAENPVNEEQAGGEERMENFTTNLNQLARVGGIDPLIGRDKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVPEVMKDCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTSSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVMGSTTYQEFSNIFEKDRALARRFQKIDITEPSVEETVQILNGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLVPVSKRKKTVNVSDIESVVARIARIPEQSVSATDRDTLKNLGDRLKMLVFGQDNAIEALTEAIKMSRAGLGQDRKPVGSFLFAGPTGVGKTEVTVQLAKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVVLLDEIEKAHPDVFNLLLQVMDNGMLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIQQDNSTDAMEEIKKIFTPEFRNRLDNIIWFRHLDTAVIHQVVDKFIVELQAQLDAKGVSLEVSDDARDWLADKGYDKAMGARPMARAVQENLKKPLANELLFGSLVDGGSVSVALDKEKNQLTYHFLSAEKRKTEGTVH
>NZ_CP009454.1|WP_002211347.1|3331592_3331811_+|translation-initiation-factor-IF-1
MAKEDNIEMQGTVLDTLPNTMFRVELENGHVVTAHISGKMRKNYIRILTGDKVTVELTPYDLSKGRIVFRSR
>NZ_CP009454.1|WP_034820657.1|3330550_3331243_+|leucyl/phenylalanyl-tRNA--protein-transferase
MRLVQLSRDSLNFPPPEMALREPNGLLAMGGDLSPARLMNAYQRGIFPWFSPGDPILWWSPDPRAVMLPESFHLSRSMARFHRRSPFRVTMNHAFPQVLEGCASGRQEGTWITFEVKRAWLRLYELGHAHSIEVWSDNRLVGGMYGLALGQIFCGESMFSRQENASKTALWVFSQHFLAHQGRLIDCQVLNPHTASLGAVEIPRVDYLQYVQTLAWQPVLSGCWQTQTLF
>NZ_CP009454.1|WP_038647845.1|3328786_3330517_+|cysteine/glutathione-ABC-transporter-ATP-binding-protein/permease-CydC
MNPLLPFLRLFRRHPWRLSLGIILAIATLLASIGLLTLSGWFLAASSLAGVAGLYSFNYMLPAAGVRGAAITRTASRYFERLVSHDATFRVLQHLRVFTFSKLIALAPEQLACFRQGELLNRFVSDVDTLDHLYLRVISPLVGAAVVIVVVTCGLAILDVPLALLLGGIMLLTLLLMPPLFWRLGTSAGHRIAQHQASWRLQLTQWVTGLAELQIYGAAVLWRKKLDAEEMRWQQAQQHQHRLQALAQSLLLLISGSTVVLLLWISAAGVDGDSAPGAFIALFVFCGLAAFEALAPVAGAFLPLSQVSGAAQRVQEIIEQAPLIRFPSSTVSSDSGISLTLEKITFSYPQRPEPVLRHFSLTLRTGEHLALLGPTGCGKSSLLALITRGWLAQQGDIRLNNIPLAEWDEKSLRQRISVVTQRVHLFSQTLRDNLLLAHPAASDEQLNAVLHQVGLTHLAEHDEGLNAWMGEGGRPLSGGELRRLAIARALLHNGDLWLLDEPTEGLDATTEQQILTLLRQVSQGKTVIMVTHRLSGLATMDRICVMDQGQIIESGTHDELISKAGRYWRFHQRFAL
>NZ_CP009454.1|WP_038647859.1|3341755_3342076_-|heavy-metal-binding-domain-containing-protein
MKFSTTPTLEGHSISEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKARQIAFEELEEQAKALGANAVVGIDIDYETVGKDSSMLMVSVTGTAVIIR
>NZ_CP009454.1|WP_038647861.1|3342173_3342713_+|lipoprotein
MRNNAFALLVPAALLLSACTTVEPVIKDNGPRTASCVDGGPDSVAQQFYDLRISQPGQGLPDSTTLAKYRPYLSDHLYQKLLSASKQSSKPASWSQGDLFSSLAQGPTSAEVASASTIPNRDARNIPLRVDLSREGKSWHDEVLMIHEGTCWAVDDIRYVGDWPHAGGGSLSQLLEEKK
>NZ_CP009454.1|WP_038647863.1|3343697_3344429_+|arginine-ABC-transporter-substrate-binding-protein
MKKVVLAALLAGLSLSASAAQTLRFATEASYPPFEFVDSDNKIQGFDVDLANALCKEIDATCTFTNQAFDSLIPSLKFRRFDAVMAGMDITPEREKQVLFSKPYYDNSAIFIAQKGKLANVDALKGKRVGVQNGTTHQKYLSDKHSDITVVPYDSYQNAVLDLKNGRIDAVFGDTAVVNEWLKQNANLAPLGEKVTDKDYFGTGLGIAVRQGNTELQGKFNTALEKIKADGTYKTIYNKWFQQ
>NZ_CP009454.1|WP_038647865.1|3344435_3345149_+|arginine-ABC-transporter-permease-ArtQ
MNEMIPLASAAGMTVGLAVCALIAGLVLAMIFAGWETVRWKPLAWIGTALVTLIRGLPEILVVLFVYFGASQLLLTLSDGFHINLGLFSIPVQVQIENFDVSPFLCGVIALAMLYSAYASQTLRGALKAVPVGQWESGQALGMKKSAIFFRLIMPQMWRHALPGLGNQWLVLLKDTALVSLISVNDIMLQTKSIATRTQEPFTWYLVAAAVYLIITLFSQAILRRIESRTTRFERGA
>NZ_CP009454.1|WP_038647867.1|3345152_3345821_+|arginine-ABC-transporter-permease-ArtM
MLDYLPELLKGLHTSLTLTVASLIAALLLSLLCTIVLSLKVPVLNWLVKGYITVFTGTPLLVQIFLIYYGPGQFPSIQNVPWLWHLLSQPWLCALIALSLNSAAYTTQLFYGAVRAIPSGQWQSCAALGMNRKDTLRILLPYAFKRALSSYSNEVVLVFKSTSLAYTITLMEVMGHGQLLYGRTYDITVYAAAGLIYLVVNGLLTLMMRLIEKRALAFEHRN
>NZ_CP009454.1|WP_038647869.1|3346008_3346740_+|arginine-ABC-transporter-substrate-binding-protein
MKKWIVAAALATLAMNAYAAEKIRFASSATYPPFESLDHDNQIVGFDIDLAKALCQQMKADCTFTNNAFDSLIPSLKFRRYDAVISGMDITAERSKQVDFTQPYYANSAIVIAQKGQFTDFSQLKGKRVGVENGTTHQKYLLEKHPEVISVSYDSYQNAILDLKNGRLNGVFGDSAVVNQWLKANDDLSAVGEHITDTEYFGTGLGIAVRKGNATLLKEMNDALVALKADGTWQQINQKWFPE
>NZ_CP009454.1|WP_038647871.1|3346803_3347940_-|23S-rRNA-(uracil(747)-C(5))-methyltransferase-RlmC
MYCALYDAGRCRSCQWLEKPYPQQLSEKQSLLEQLLSQTAVAEYLPPVTSPLQGFRNKAKMVVSGSVERPIFGMMARDGEPVDLCDCPLYPASFAPVFDVLKPFIARAGLTPYNVARQRGELKFLLLTESSQGGMMLRFVLRSTRKLEQLRAALPWLQQQLPQLKVISANIQPVHMAILEGEEEIALTPDQALAECFNQVPLYIRPQSFFQTNPQVAADLYATARDWVAELPVTSMWDLFCGVGGFGLHCATPEMQLTGIEINAEAIACAQQSAEQLGLDKVSFAALDSTRFATSHEQVPQLVLVNPPRRGIGAELCAYLSEMAPDYILYSSCNPTTMAQDIARLADYAVSRVQLFDMFPHTAHFEVLTLLIKKGGAT
>NZ_CP009454.1|WP_038647873.1|3347988_3348453_-|YbjO-family-protein
MSETLKNAMANSTPAPVMVAGIAIIATRCLSVLMLANELGYDEIANFVHRSAQAWDSTLIFIASQLIFLFELRCAFTLLRGSNRGRWGYVVAQIIVLGYMLMASVGWIYPEIFSIPGETNAQIIHHTLMQKVPDALVLLLLFVPASSRAFFRAR
>NZ_CP009454.1|WP_038647875.1|3348651_3349497_-|putrescine-ABC-transporter-permease-PotI
MNQLPTIRSPWRTAILAACFLFLYAPMLLLVVYSFNSSQLVTVWESFSFHWYKVLFQDDAMLDAVGLSLTIAALSATMAVVLGTMAAVIIVRFGRFRGHSGFAFMLTAPLVMPDVITGLSLLLLFVAMGNTFGWPSDRGMLTIWLAHVTFCTAYVAVVINSRLRELDRSIEEAAMDLGATPLKVFFVITVPMIAPAIVTGWLLAFTLSLDDLVIASFVTGPGATTLPMAIFATVRRGVNPEINALASLILFVVGLVGFIAWRFMAHEEKQRLRDIQKARRG
>NZ_CP009454.1|WP_034820712.1|3349493_3350450_-|putrescine-ABC-transporter-permease-PotH
MSQISQRSEPEVVGTPLQRWGTRIKMLHGRKLVIALPYLWLILLFLLPFLIVLKISFADIARAIPPYTDLVTWADDQLNLVLNLGNYITLTDDPLYAEAYLTSLKVAAISTVICLLIGYPLAWAVAHSKPSMRTILLLLVILPSWTSFLVRVYAWMGLLNNNGILNRFLMWLGVIDHPLVILYTNTAVYIGIVYCYLPFMVLPIYTALTRIDYSLVEASLDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEYVIPELLGGPDSIMIGRILWQEFFNNRDWPVASALAVIILLILILPIIWFHKHQNRELGEKE

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Crispr_ID: NZ_CP009454_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009454_2

3684225-3684382

Orphan

Consensus_repeat	Method
TCGCACCCATGCTGAGGTGCGGGCAGGCAACGCTGTGGAGTAAAGCGTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009454_2

>merge|NZ_CP009454|2|3684225-3684382|CRISPRCasFinder
TCGCACCCATGCTGAGGTGCGGGCAGGCAACGCTGTGGAGTAAAGCGTCAAGCCAAAGATAAAAGTGACGAGCAATCTGTGACAATCAGCCGATGTCACTCCACAAATTCGCACCCATGCTGAGGTGCGGGCAGGCAACACTGTGGAGTAAAGCGTCA

>NZ_CP009454|2|2|3684225-3684382|CRISPRCasFinder
TCGCACCCATGCTGAGGTGCGGGCAGGCAACGCTGTGGAGTAAAGCGTCA	AGCCAAAGATAAAAGTGACGAGCAATCTGTGACAATCAGCCGATGTCACTCCACAAAT
TCGCACCCATGCTGAGGTGCGGGCAGGCAACACTGTGGAGTAAAGCGTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009454.1\|WP_007886947.1\|3687524_3687863_-\|P-II-family-nitrogen-regulator	unknown	unknown	gnl\|CDD\|182629
NZ_CP009454.1\|WP_038648536.1\|3686201_3687491_-\|ammonium-transporter-AmtB	unknown	unknown	gnl\|CDD\|182630
NZ_CP009454.1\|WP_038648520.1\|3679093_3679351_+\|type-B-50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|234969
NZ_CP009454.1\|WP_034828141.1\|3682285_3682639_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009454.1\|WP_008103894.1\|3679365_3679506_+\|50S-ribosomal-protein-L36	unknown	unknown	gnl\|CDD\|179138
NZ_CP009454.1\|WP_038648547.1\|3694245_3695961_+\|peptide-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|226909
NZ_CP009454.1\|WP_038648539.1\|3688122_3689898_-\|SmdB-family-multidrug-efflux-ABC-transporter-permease/ATP-binding-protein	unknown	unknown	gnl\|CDD\|182733
NZ_CP009454.1\|WP_038648530.1\|3683806_3684118_+\|MGMT-family-protein	unknown	unknown	gnl\|CDD\|226219
NZ_CP009454.1\|WP_034828143.1\|3681286_3681943_-\|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|213202
NZ_CP009454.1\|WP_038648541.1\|3689890_3691660_-\|SmdA-family-multidrug-ABC-transporter-permease/ATP-binding-protein	unknown	unknown	gnl\|CDD\|182732
NZ_CP009454.1\|WP_034828126.1\|3691684_3692146_-\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP009454.1\|WP_038648522.1\|3679550_3680429_-\|metal-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238557
NZ_CP009454.1\|WP_034828137.1\|3683187_3683406_+\|hemolysin-expression-modulator-Hha	unknown	unknown	gnl\|CDD\|182856
NZ_CP009454.1\|WP_038648534.1\|3685266_3686130_+\|acyl-CoA-thioesterase-II	unknown	unknown	gnl\|CDD\|182519
NZ_CP009454.1\|WP_034828139.1\|3682785_3683163_+\|Hha-toxicity-modulator-TomB	unknown	unknown	gnl\|CDD\|182631
NZ_CP009454.1\|WP_038648545.1\|3693330_3694152_-\|HMP-PP-phosphatase	unknown	unknown	gnl\|CDD\|185080
NZ_CP009454.1\|WP_038648518.1\|3675784_3678934_+\|multidrug-efflux-RND-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|185081
NZ_CP009454.1\|WP_038648524.1\|3680450_3681290_-\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_CP009454.1\|WP_038648532.1\|3684504_3685062_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225668
NZ_CP009454.1\|WP_038648543.1\|3692261_3693296_+\|PLP-dependent-cysteine-synthase-family-protein	unknown	unknown	gnl\|CDD\|223110

Protein	Function_ID	Function_description	E-value
NZ_CP009454.1\|WP_007886947.1\|3687524_3687863_-\|P-II-family-nitrogen-regulator	gnl\|CDD\|182629	PRK10665, PRK10665, P-II family nitrogen regulator.	1.51762e-66
NZ_CP009454.1\|WP_038648536.1\|3686201_3687491_-\|ammonium-transporter-AmtB	gnl\|CDD\|182630	PRK10666, PRK10666, ammonium transporter AmtB.	0
NZ_CP009454.1\|WP_038648520.1\|3679093_3679351_+\|type-B-50S-ribosomal-protein-L31	gnl\|CDD\|234969	PRK01678, rpmE2, type B 50S ribosomal protein L31.	9.74797e-40
NZ_CP009454.1\|WP_038648541.1\|3689890_3691660_-\|SmdA-family-multidrug-ABC-transporter-permease/ATP-binding-protein	gnl\|CDD\|182732	PRK10789, PRK10789, SmdA family multidrug ABC transporter permease/ATP-binding protein.	0
NZ_CP009454.1\|WP_008103894.1\|3679365_3679506_+\|50S-ribosomal-protein-L36	gnl\|CDD\|179138	PRK00831, rpmJ, 50S ribosomal protein L36; Validated.	1.48863e-12
NZ_CP009454.1\|WP_038648547.1\|3694245_3695961_+\|peptide-ABC-transporter-substrate-binding-protein	gnl\|CDD\|226909	COG4533, COG4533, ABC-type uncharacterized transport system, periplasmic component [General function prediction only].	1.59945e-153
NZ_CP009454.1\|WP_038648539.1\|3688122_3689898_-\|SmdB-family-multidrug-efflux-ABC-transporter-permease/ATP-binding-protein	gnl\|CDD\|182733	PRK10790, PRK10790, SmdB family multidrug efflux ABC transporter permease/ATP-binding protein.	0
NZ_CP009454.1\|WP_038648534.1\|3685266_3686130_+\|acyl-CoA-thioesterase-II	gnl\|CDD\|182519	PRK10526, PRK10526, acyl-CoA thioesterase II; Provisional.	0
NZ_CP009454.1\|WP_034828143.1\|3681286_3681943_-\|ABC-transporter-ATP-binding-protein	gnl\|CDD\|213202	cd03235, ABC_Metallic_Cations, ATP-binding cassette domain of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.	9.54508e-77
NZ_CP009454.1\|WP_034828126.1\|3691684_3692146_-\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	1.55811e-51
NZ_CP009454.1\|WP_038648522.1\|3679550_3680429_-\|metal-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238557	cd01137, PsaA, Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).	2.27252e-126
NZ_CP009454.1\|WP_034828137.1\|3683187_3683406_+\|hemolysin-expression-modulator-Hha	gnl\|CDD\|182856	PRK10945, PRK10945, hemolysin expression modulator Hha.	4.69506e-42
NZ_CP009454.1\|WP_038648530.1\|3683806_3684118_+\|MGMT-family-protein	gnl\|CDD\|226219	COG3695, COG3695, Predicted methylated DNA-protein cysteine methyltransferase [DNA replication, recombination, and repair].	8.62085e-50
NZ_CP009454.1\|WP_034828139.1\|3682785_3683163_+\|Hha-toxicity-modulator-TomB	gnl\|CDD\|182631	PRK10667, PRK10667, Hha toxicity modulator TomB.	5.72927e-79
NZ_CP009454.1\|WP_038648545.1\|3693330_3694152_-\|HMP-PP-phosphatase	gnl\|CDD\|185080	PRK15126, PRK15126, HMP-PP phosphatase.	6.22957e-162
NZ_CP009454.1\|WP_038648518.1\|3675784_3678934_+\|multidrug-efflux-RND-transporter-permease-subunit	gnl\|CDD\|185081	PRK15127, PRK15127, multidrug efflux RND transporter permease subunit AcrB.	0
NZ_CP009454.1\|WP_038648524.1\|3680450_3681290_-\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	3.63804e-49
NZ_CP009454.1\|WP_038648532.1\|3684504_3685062_-\|hypothetical-protein	gnl\|CDD\|225668	COG3126, COG3126, Uncharacterized protein conserved in bacteria [Function unknown].	4.84917e-50
NZ_CP009454.1\|WP_038648543.1\|3692261_3693296_+\|PLP-dependent-cysteine-synthase-family-protein	gnl\|CDD\|223110	COG0031, CysK, Cysteine synthase [Amino acid transport and metabolism].	5.6672e-104

>NZ_CP009454.1|WP_038648530.1|3683806_3684118_+|MGMT-family-protein
MNDTSNFSERVWQIIAAIPRGKVTTYGDIALLAGSPRAARQVGGVLRRLPEGSKLPWFRVINRHGRISLQGDDLFRQRDALEAEGIEVSDAGEIELEKYRWKY
>NZ_CP009454.1|WP_034828137.1|3683187_3683406_+|hemolysin-expression-modulator-Hha
MSNQALTKTDYLMRLRRCRSIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKVPVSVWKFVR
>NZ_CP009454.1|WP_034828139.1|3682785_3683163_+|Hha-toxicity-modulator-TomB
MDEYSPKRHDIAQLKFLCENLFDESMATLTDSHHGWVNDPTAESNLQLNDLIEHIASFTMNYKIKHVEDEALITQIDEYLDDTFMLFSSYGINTQDLQRWQRSARRLFNLFAEECAFLQQPSHSF
>NZ_CP009454.1|WP_034828141.1|3682285_3682639_+|hypothetical-protein
MQSIIHCDIAVDEDDCEKLQAIIQGNILKIAEALAGDLQWYSQNAQLVPDSFKIISIQPHDNNRFKMLYDFKWDLFNPCLDLNETSTQHEEVLFQIVPGALVFSVIDNTRPSPADEL
>NZ_CP009454.1|WP_034828143.1|3681286_3681943_-|ABC-transporter-ATP-binding-protein
MMHFNRLQGGYQGQAVTPIVTGELAAGSMTALIGANGTGKSTLLKTIAGLLPPIAGTCELKISPKALGWLPQRSELETRFPLTVYELVAMGCWPRCGWFGGINRAMRQEIDAALDAVQMRDFADAQPSMLSGGQLQRVLFARLMLQQSKVWLLDEPFNGIDTQTVTLLMSILEQQQQAGTTLLVVLHDRPLVARYFKDVLSLDDADSAQTPLLRRVAS
>NZ_CP009454.1|WP_038648524.1|3680450_3681290_-|metal-ABC-transporter-permease
MTLIQPFIEFGFMRRALVACVALALSATPLGVFLSLRRMSLVGDALSHAVLPGAAIGYLVSGLSLVAMGIGGLIAGLAVALLSGAVSRYTPLKEDASFSGFYLGSLALGVTLVSLRGSSVDLLHVLFGSLLAVDNAAILLVGGIAAFNLLMLAVIFRPLVIDAFDPDFLRAQGKWSAPIVHGIFLMLVVLNLVAGFQVLGTLMSVGLMMLPATSARFWSRHLACMLGIAMLLAMIAALVGLILSWHFSLPAGPAVVLSAAVLFLLSVLTGPCGGLLRRR
>NZ_CP009454.1|WP_038648522.1|3679550_3680429_-|metal-ABC-transporter-substrate-binding-protein
MKKLPLSLAIGAMFISPLTMAKKVDVVASFTVLADIVKQVGGDHVNVKSLVQPNGDPHTFEPTPQDSQALAKANVVFVSGLGMEGWMDRLISASGYKGTIVVASNGVNTRKMEEDGKTVTDPHAWNSMHNGVIYATNVMNALIKADPEDAADIRKSGESYIQQLEKLDSWAKTEFAAVPKSKRKVLTSHDAFGYFGQRYGVSFLAPVGFSTEAEASASDVASIIKQLKAEHIKTYFMENQTDPRLVKQIASETGAQPGGELYPEALSEANGPAATYVAAFKHNVDIMLQSMK
>NZ_CP009454.1|WP_008103894.1|3679365_3679506_+|50S-ribosomal-protein-L36
MQVLSSLRSAKTRHKDCKVVRRKGRIYVICKTNPRFKAVQGRKKKR
>NZ_CP009454.1|WP_038648520.1|3679093_3679351_+|type-B-50S-ribosomal-protein-L31
MKANIHPQYRPVVFHDTSVDEYFKIGSTIKTERTIEFEGEVLPYVTLDVSSKSHVHYTGKQKDLTKEGSAARFNKRFGSFLTRGN
>NZ_CP009454.1|WP_038648518.1|3675784_3678934_+|multidrug-efflux-RND-transporter-permease-subunit
MAKFFIDRPIFAWVLAIIIMLAGTLAIISLPIEQYPNVAPPAVEIQATYPGADAKTLQDSVTQVIEQNMNGIDGLMYMASSSDSSGTLTLTLTFQSGTNADIAQVQVQNKLQLAMPLLPQEVQQQGIQVKKSSSSFLMVAGFVSDDGSMTQNDISDYVASNIKDPISRTPGVGDTQVFGAQYAMRIWLDPHKLNNYQLTPVDVISALGTQNTQVAAGQLGGTPPVPGQQLNASIIAQTRLTNTEEFGNIMLKVNQDGSQVRLRDVAKIELGGENYEIIARYNGKPASGIGVKLATGANALDTAKAVKDELAKLQPFFPSGMKTVYPYDTTPFVKISIFEVVKTLFEAIVLVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAIISAFGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATKRSMEQIQGALVGIALVLSAVFIPMAFFGGSTGVIYRQFSITIVSAMALSVLVALILTPALCATMLKPIKKGEHGKTTGFFGWFNRLFDKSTNHYVDSVGHIVRSTGRYLVIYLVIVVGMAYLFLKLPTSFLPEEDQGLLLAQAQLPAGATQERTQKVLDQVTDYFLNKEKDSVNSVFTVNGFGFAGRGQNTGIAFVSLKPWDERGDASLKVPAIAGRAMQALGQIKDAMVFPFNLPAIIELGNATGFDFMLTDQGNLGHEKLTAARNQLFGMIAQHPDTLVGVRPNGMEDTPQYKLIIDQEKAQALGVSLSDINTTLGAGWGGSYVNDFIDRGRVKKVYVMGQADSRMLPDDISKWFVRNSSGTMVPFSAFSSAKWQYGSPRLERYNGLPSMEILGQAAPGKSSGDAMNLMEELAGKLPAGIGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVVGALIFTTLRGLSNDVYFVVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGLVESTLEAARMRLRPILMTSLAFILGVLPLAISTGAGSGAQNAVGTGVMGGMVTATALAIFFVPVFFVVVRRRFGKNKAEIEQGHPVEHKH
>NZ_CP009454.1|WP_038648532.1|3684504_3685062_-|hypothetical-protein
MKLWHVISGVTLAAALAGCADHSKPVATPTLGSAVAGQQAAITQPNVSGSVYIRQRIALPPDAVLTVTLSDASLADAPSKVLAQHVVRTEGKQAPFQFVLPFNPADIQPNARILLSAAIAIDGKLAFITDTVKPVINQGGTKAELLLVPVTNMVMQTTPGAATTVPSTSPTQVVPSASVPAPTSM
>NZ_CP009454.1|WP_038648534.1|3685266_3686130_+|acyl-CoA-thioesterase-II
MSQALQNLLNLLDLEKLEEGLFRGQSEDLGLRQVFGGQVVGQALYAAKQTVPEERIIHSFHSYFLRPGDSEKAIIYDVETLRDGKSFSARRVSAVQNGQPIFYMTASFQAPESGFEHQNSMPPVPGPDNLPSEQDLAQKLAAHLPLKLKEKFLAERPLDIRPVQIHNPLKGRVDEPMRQVWIRANGKLPDDRRIHQYLLGYASDLNFLPVALQPHGKGFLEPDMQVATIDHSMWFHRPFDLSEWLLYSVVSTSASGARGFVRGEFYTQDGTLVATTVQEGVMRQRDA
>NZ_CP009454.1|WP_038648536.1|3686201_3687491_-|ammonium-transporter-AmtB
MNKMMTKLGLTSLALLPSLAMAAAPAVADKADNAFMMICTALVLFMTIPGIALFYGGLIRGKNVLSMLTQVAVTFALVCVLWVIYGYSLAFSEGNAFFGNFQWAMLKNIELKAVMGSFYQYIHVAFQASFACITVGLIVGAIAERIRFSAVLIFVVVWLTLSYLPIAHMVWAGGLLAQDGALDFAGGTVVHINAAVAGLVGAYLVGKRAGFGKEAFKPHNLPMVFTGTAILYVGWFGFNAGSASSANEIAALAFLNTVVATAGAVLSWVFGEWAMRGKPSLLGACSGFIAGLVAITPACGYVGVGGALIIGLAGGLAGIWGVTTLKKWLRVDDPCDVFGVHGVCGILGCILTGVFASSSLGGVGYAEGVTMGHQVWVQLFSCGVTIVWSGVVAFIGFKLADMIVGLRVPEDQEREGLDVNSHGENAYNQ
>NZ_CP009454.1|WP_007886947.1|3687524_3687863_-|P-II-family-nitrogen-regulator
MKLVTVVIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDIAIADDQLDEVVDVISKAAYTGKIGDGKIFVAELQRVIRIRTGETDEAAL
>NZ_CP009454.1|WP_038648539.1|3688122_3689898_-|SmdB-family-multidrug-efflux-ABC-transporter-permease/ATP-binding-protein
MAKSQRLWPTLKRLLSYGKPWRKSLWLAVGMLWIAAAAEVTGPVLVSYFIDNLVAKHQMPWDIAIGLLVCFILLQLLAAGLHYFQALLFNRAAIGVVQQLRMDVMNAALRQPLSAFDTQPVGQIISRVTNDTEVIKDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIVIFPLVLTVMLIYQRYSTPIARRVRSYLADINNGFNEVINGMSVIQQFRQQARFGERMGEASRSHYLARMETLRLDGFLLRPLLSLFSAMILCGLLMLFSFATPGVFEVGVLYAFITYLGRLNEPLIELTTQQSMLQQAVVSGERIFELMDATQQGYGTDNLPLASGRITLHDVSFAYRDNRDVLSHISLEVPARGFVALVGHTGSGKSTLANLLMGYYPVTRGSIELDGRPLSQLTHEALRQSVAMVQQDPVVLADTLLANVRLGRDIPEEQVWQALEKVQLASLARSMSEGIHTRLGEQGNNLSVGQKQLLALARVLVSLPQILILDEATANIDSGTEQAIQHALRALRQHSTLVVIAHRLSTITEADQILVLHRGQVAERGTHAQLLAQQGRYWQMYQLQQAGDELAASIPAQSEG
>NZ_CP009454.1|WP_038648541.1|3689890_3691660_-|SmdA-family-multidrug-ABC-transporter-permease/ATP-binding-protein
MRLFSQLSWYFLREWRRYLGAVSLLIVIALLQLLPPHVVGVIVDGVTQHTLSSGKLFMWIGVMLVTAVIVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPAFYLRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGLVVLVVMSVQISWELTLLALIPMPLMAIAIQKDGSRLHQRFKVAQAAFSSLNDQTQESLTSIRMIKAFGLEDHQSQQFADIARDTGKKNLHVARVDARFDPIIYIAVGFSNLLAIAGGGWMVWHGSLTLGQLTSFVMYLGLMIWPMLALAWMINIVERGSAAWSRIRALLAEAPAVEDGQKVLPDDAGDLQVAIREFHYPANAGAALSHVNFQLKPGQMLGLCGPTGCGKSTLLSLIQRHFDIDQGDIRYHNLPLTQLRLDSWRSRLAVVSQTPFLFSDTVANNLALGRPNASQEEIERVARMACVHDDILRLPQGYDTEVGERGVMLSGGQKQRIAIARALLLNAEILILDDALSAVDGRTEHEILHNLRQWGKGRTLIISAHRLSALTEASEILVLQQGAVTQRGDHDSLLAKEGWYRDMYRYQQLEAALDEDETAEEANHG
>NZ_CP009454.1|WP_034828126.1|3691684_3692146_-|Lrp/AsnC-family-transcriptional-regulator
MLDKTDRTLLAILQQDCTLSLQALADAVNLTTTPCWKRLKKLEDDGIIRARVALLDGEKMGLSLTAFMFVKTQQHSSDWFQQFVAVVQQMPEVMAFYRMAGEYDYLLRIQVADMKSYDAFYKRLVNGVPGLIDVTSSFAMEEIKYTTALPVAP
>NZ_CP009454.1|WP_038648543.1|3692261_3693296_+|PLP-dependent-cysteine-synthase-family-protein
MQTPWVRHAINEINADFQRSADTHLIRFALEDFPGIRFYLKDESTHPSGSLKHRLARSLFLYGLANGWIRENTPIIEASSGSTAVSEAYFARLLGLPFIAVMPASTAKRKIEMIRFYGGECHFVADPCQLYSESERLARELNGHFMDQFTYAERATDWRGNNNIAESIFRQMAHEPFPVPHTLIMSAGTGGTSATLGRYIRYQGHDTRLLVVDPQHSVFFDFWHSRDSALRNDRGSMIEGIGRPRVEPSFLPDVIDEMIKVPDGATVAAMLYLEKILGRRPGASTGTNFWGMLQVAKRMREHGEQGSLVTLLCDSGERYPDTYYNPEWVAQNIGDIQPWLRELQ
>NZ_CP009454.1|WP_038648545.1|3693330_3694152_-|HMP-PP-phosphatase
MARLAAFDMDGTLLLPTHRLGNETIDTLHALHQRDITLAFATGRHLMDVQVVREQLTLPAWLITGNGTRIHDLEGQQLFGCDLSSSVAEEVIHTHWQTPASIHIFNDEGWFTDKPLLGALEAHVMSGFHYQLRDLRQMSAHEVTKICFIAPHEMLQALKVELQQALGERANICFSAWDCLEVLPLDCHKGAALAYLCQHLSLSMADCMAFGDAMNDREMLERVGSGFIMGNAMHQLKSSLPHLPIIGHCETQAVSHYLNHWMTTPHLDYSPEC
>NZ_CP009454.1|WP_038648547.1|3694245_3695961_+|peptide-ABC-transporter-substrate-binding-protein
MRQLHRVNQFQRLWQLSQGDPLRLSVAAMAQHCFCSERHVRTLLRQWQDADWLHWRGESGRGKQGELTFLISPEQLRQQLLTQQLEAGEAIQALQVLDLHPERLVKMLRPLMGGQWQNQAPVLRIPYYRAMEPLRPLRLTGRAEQHLVRQIFSGLTRFNGDDVEGDLAHHWQHDGSGCDWYFWLRPQLSWHNDEPIHAAQLVAQLQQIMQTVRGSRLLASIEHIEAPHPLALRIQLRQSDYWLPQRLAHQYCLLPHPDAMDIGSGPWKLTHFTDELVRLESHARWHLQRPLIQVVEYWITPQLFAHGLGTSCRHPVQIAIGDPDELDALRPVDHSISLGFCYLAPRISADFTAAQVTTLIALIQHSGVIQQLPLDEGLITASKELLPGWPVPSAGMTTARLPARLTLHYHLPIELHVMAQALVPLLAQQGCELTCVFHDVKNWRDDIDLSDADVVMGDRLIGDAPLFTLANWLENDPVWAPIRAPVLTAPLNAIAHQPSPEQRATLTRQLFQQLMRDGHLLPLFNYRYQVFAPPGVEGIQLNTLGWFDFTRAWIPPPATAGTVQPAPEPVP

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1072499 : 1117198

Erwinia_phage(63.64%)

tail,integrase,lysis,tRNA,portal,head,plate,transposase,capsid,terminase

attL 1075209:1075261|attR 1106990:1107042

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038649854.1\|1072499_1073204_+	MgtC/SapB family protein	G3MA03	Bacillus_virus	5.3e-14	42.5
WP_038644564.1\|1073260_1073965_-	hypothetical protein	NA	NA	NA	NA
WP_052059348.1\|1074278_1074833_+	cell filamentation protein Fic	NA	NA	NA	NA
1075209:1075261	attL	NA	NA	NA	NA
WP_038644567.1\|1075332_1076370_-\|integrase	tyrosine-type recombinase/integrase	F1BUS9	Erwinia_phage	3.6e-176	86.9
WP_038644569.1\|1076369_1076960_-	phage repressor protein CI	A0A218M4J1	Erwinia_phage	5.7e-54	52.6
WP_038644571.1\|1077088_1077352_+	hypothetical protein	A0A218M4I5	Erwinia_phage	3.3e-38	88.4
WP_038644572.1\|1077383_1077893_+	phage regulatory CII family protein	F1BUS6	Erwinia_phage	2.7e-60	71.6
WP_071845585.1\|1077903_1078080_+	DUF2724 domain-containing protein	NA	NA	NA	NA
WP_038644573.1\|1078043_1078382_+	DUF5347 domain-containing protein	A0A1S6L019	Salmonella_phage	5.8e-27	57.5
WP_038644575.1\|1078451_1078682_+	DUF2732 domain-containing protein	F1BUS3	Erwinia_phage	5.0e-14	57.5
WP_038644577.1\|1078681_1078909_+	TraR/DksA family transcriptional regulator	E5G6L7	Salmonella_phage	6.0e-20	61.3
WP_038644580.1\|1078905_1079769_+	DNA adenine methylase	A0A1S6L011	Salmonella_phage	1.0e-80	55.6
WP_038644582.1\|1079765_1080518_+	hypothetical protein	M1FN76	Enterobacteria_phage	4.1e-121	80.0
WP_052059479.1\|1080529_1082779_+	replication endonuclease	F1BUS0	Erwinia_phage	0.0e+00	80.0
WP_071845586.1\|1082980_1083172_+	hypothetical protein	F1BUR9	Erwinia_phage	2.1e-21	85.7
WP_038644586.1\|1083189_1083423_+	DinI family protein	E5G6M1	Salmonella_phage	7.8e-15	45.5
WP_038644590.1\|1083891_1084752_+	hypothetical protein	NA	NA	NA	NA
WP_038644593.1\|1084790_1085048_+	hypothetical protein	NA	NA	NA	NA
WP_052059351.1\|1085040_1085505_+	hypothetical protein	NA	NA	NA	NA
WP_038644596.1\|1085925_1086972_-\|portal	phage portal protein	F1BUR7	Erwinia_phage	9.2e-172	84.8
WP_038644598.1\|1086971_1088735_-\|terminase	terminase ATPase subunit family protein	F1BUR2	Erwinia_phage	0.0e+00	91.0
WP_038644600.1\|1088880_1089735_+\|capsid	GPO family capsid scaffolding protein	F1BUR1	Erwinia_phage	1.9e-106	71.5
WP_038644602.1\|1089782_1090919_+\|capsid	phage major capsid protein, P2 family	F1BUQ8	Erwinia_phage	3.4e-164	83.3
WP_038644604.1\|1090922_1091591_+\|terminase	terminase endonuclease subunit	F1BUQ7	Erwinia_phage	1.9e-85	71.6
WP_038644606.1\|1091681_1092149_+\|head	head completion/stabilization protein	F1BUQ6	Erwinia_phage	8.5e-61	78.1
WP_038644608.1\|1092148_1092352_+\|tail	tail protein X	F1BUQ5	Erwinia_phage	1.7e-21	70.1
WP_038644610.1\|1092355_1092568_+	hypothetical protein	E5G6N0	Salmonella_phage	8.7e-13	54.4
WP_038644612.1\|1092548_1093064_+	lysozyme	E5G6N1	Salmonella_phage	2.3e-75	80.4
WP_038644614.1\|1093060_1093450_+	hypothetical protein	A0A1S6KZZ2	Salmonella_phage	9.4e-13	37.2
WP_038644616.1\|1093446_1093869_+\|lysis	phage lysis regulatory protein, LysB family	F1BUQ1	Erwinia_phage	1.3e-44	68.8
WP_038644618.1\|1093970_1094438_+\|tail	phage tail protein	F1BUP9	Erwinia_phage	1.4e-55	70.3
WP_038644620.1\|1094434_1094881_+	phage virion morphogenesis protein	F1BUP7	Erwinia_phage	2.2e-50	70.3
WP_038644622.1\|1094910_1095714_+	hypothetical protein	NA	NA	NA	NA
WP_038644624.1\|1095790_1096375_+\|plate	phage baseplate assembly protein V	F1BUP5	Erwinia_phage	8.1e-85	78.9
WP_038644626.1\|1096371_1096722_+\|plate	baseplate assembly protein	F1BUP4	Erwinia_phage	7.1e-44	72.4
WP_038644627.1\|1096726_1097635_+\|plate	baseplate assembly protein	F1BUP3	Erwinia_phage	3.2e-120	75.8
WP_038644628.1\|1097627_1098236_+\|tail	phage tail protein I	F1BUP2	Erwinia_phage	1.3e-88	77.2
WP_081946711.1\|1098232_1099192_+\|tail	phage tail protein	A0A2I8TVA9	Erwinia_phage	1.6e-74	76.2
WP_038644629.1\|1099200_1099611_+\|tail	tail assembly chaperone	A0A2P1JUG3	Erwinia_phage	7.1e-19	45.8
WP_038644633.1\|1099730_1100900_+\|tail	phage tail sheath protein	F1BUU3	Erwinia_phage	1.7e-195	87.4
WP_038644634.1\|1100912_1101422_+\|tail	phage major tail tube protein	F1BUU2	Erwinia_phage	1.4e-77	81.8
WP_038644636.1\|1101486_1101765_+\|tail	phage tail assembly protein	F1BUU0	Erwinia_phage	3.8e-32	77.8
WP_071845588.1\|1101797_1101923_+\|tail	GpE family phage tail protein	A0A0F7LCR6	Escherichia_phage	4.9e-08	71.4
WP_038644638.1\|1101912_1104375_+\|tail	phage tail tape measure protein	Q858U7	Yersinia_virus	3.8e-184	51.3
WP_038644639.1\|1104378_1104906_+\|tail	phage tail protein	F1BUT6	Erwinia_phage	4.6e-63	76.2
WP_038644641.1\|1104902_1106090_+	phage late control D family protein	Q6K1G4	Salmonella_virus	3.1e-147	67.7
WP_071845589.1\|1106158_1106386_+	transcriptional regulator	F1BUT0	Erwinia_phage	6.0e-28	77.3
WP_038644643.1\|1106434_1106842_-	hypothetical protein	S4TTB4	Salmonella_phage	9.4e-32	46.7
WP_038644645.1\|1107276_1108059_-	SDR family oxidoreductase	NA	NA	NA	NA
1106990:1107042	attR	NA	NA	NA	NA
WP_038644647.1\|1108195_1108783_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_038644649.1\|1108779_1109295_+	G/U mismatch-specific DNA glycosylase	NA	NA	NA	NA
WP_038644651.1\|1109383_1110142_+	substrate-binding domain-containing protein	NA	NA	NA	NA
WP_038644653.1\|1110181_1111498_-\|transposase	IS4 family transposase	NA	NA	NA	NA
WP_034828348.1\|1111621_1113466_-	RNA polymerase sigma factor RpoD	A0A2I7SAT0	Vibrio_phage	1.9e-34	33.3
WP_038644656.1\|1113826_1115572_-	DNA primase	A0A1S5RG58	Helicobacter_phage	3.2e-44	31.3
WP_001144069.1\|1115690_1115906_-	30S ribosomal protein S21	NA	NA	NA	NA
WP_038644658.1\|1116184_1117198_+\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	A0A0R6PI74	Moraxella_phage	5.3e-108	58.3

DBSCAN-SWA_2

1512354 : 1520386

uncultured_Mediterranean_phage(33.33%)

integrase

attL 1516221:1516232|attR 1520461:1520472

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038649911.1\|1512354_1513116_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.3e-66	54.5
WP_038645170.1\|1513109_1513736_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	6.3e-35	46.7
WP_038645172.1\|1513902_1515042_+	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	36.4
WP_034822992.1\|1515093_1516086_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	1.6e-32	37.6
WP_071845596.1\|1516198_1518775_-	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	1.8e-27	21.2
1516221:1516232	attL	NA	NA	NA	NA
WP_038649913.1\|1518916_1520386_+\|integrase	integrase	A0A0R6PGY7	Moraxella_phage	2.0e-23	26.3
WP_038649913.1\|1518916_1520386_+\|integrase	integrase	A0A0R6PGY7	Moraxella_phage	2.0e-23	26.3
1520461:1520472	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2066786 : 2074781

Enterobacteria_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038645967.1\|2066786_2067680_+	UTP--glucose-1-phosphate uridylyltransferase GalF	A0A127AW70	Bacillus_phage	2.7e-47	39.7
WP_038645969.1\|2067724_2068738_+	UDP-glucose 4-epimerase GalE	A0A2K9L1R4	Tupanvirus	6.5e-74	43.1
WP_038645971.1\|2070015_2071164_-	acyltransferase	C6ZR20	Salmonella_phage	7.1e-08	24.6
WP_038645973.1\|2071212_2072076_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	2.6e-111	67.5
WP_038645975.1\|2072075_2073158_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	2.1e-94	51.2
WP_038645979.1\|2073696_2074023_+	hypothetical protein	A0A222YXE6	Synechococcus_phage	1.6e-13	37.4
WP_038645981.1\|2074025_2074781_+	NTP transferase domain-containing protein	A0A1D8KNV9	Synechococcus_phage	1.9e-54	47.3

DBSCAN-SWA_4

2975922 : 2986117

Tupanvirus(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038647327.1\|2975922_2976669_-	vitamin B12 ABC transporter ATP-binding protein BtuD	A0A2H4PQG7	Staphylococcus_phage	5.1e-07	25.8
WP_038647329.1\|2976669_2977215_-	glutathione peroxidase	NA	NA	NA	NA
WP_038647331.1\|2977254_2978238_-	vitamin B12 ABC transporter permease BtuC	NA	NA	NA	NA
WP_038647333.1\|2978328_2978700_-	DUF2502 domain-containing protein	NA	NA	NA	NA
WP_007892687.1\|2978891_2979194_-	integration host factor subunit alpha	A0A0H3UZA0	Geobacillus_virus	5.6e-13	40.0
WP_038647335.1\|2979198_2981586_-\|tRNA	phenylalanine--tRNA ligase subunit beta	A0A1L3IZU3	BeAn_58058_virus	1.6e-09	29.9
WP_038647337.1\|2981600_2982584_-\|tRNA	phenylalanine--tRNA ligase subunit alpha	A0A2K9L3A8	Tupanvirus	7.6e-35	39.3
WP_121626058.1\|2982731_2982776_-	pheST operon leader peptide PheM	NA	NA	NA	NA
WP_007892678.1\|2982896_2983253_-	50S ribosomal protein L20	NA	NA	NA	NA
WP_006118955.1\|2983335_2983533_-	50S ribosomal protein L35	NA	NA	NA	NA
WP_034821726.1\|2983632_2984184_-	translation initiation factor IF-3	A0A2L0UZ54	Agrobacterium_phage	9.8e-16	32.5
WP_038647340.1\|2984188_2986117_-\|tRNA	threonine--tRNA ligase	A0A2K9L297	Tupanvirus	2.0e-127	37.3

DBSCAN-SWA_5

3623268 : 3637694

uncultured_Caudovirales_phage(38.46%)

integrase,tRNA

attL 3622864:3622877|attR 3638802:3638815

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3622864:3622877	attL	NA	NA	NA	NA
WP_038648407.1\|3623268_3624090_-	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	3.4e-44	36.4
WP_038650223.1\|3624232_3624586_-	hypothetical protein	NA	NA	NA	NA
WP_052059435.1\|3624639_3625131_-	hypothetical protein	NA	NA	NA	NA
WP_038648410.1\|3625133_3625688_-	hypothetical protein	NA	NA	NA	NA
WP_038648413.1\|3626215_3626569_-	bacteriophage protein	A0A2H4J629	uncultured_Caudovirales_phage	7.3e-57	90.6
WP_038648416.1\|3626568_3627321_-	translation initiation factor IF-2	A0A2H4J8H6	uncultured_Caudovirales_phage	3.8e-119	81.6
WP_156102806.1\|3627375_3627753_-	hypothetical protein	NA	NA	NA	NA
WP_038648422.1\|3627760_3628000_-	hypothetical protein	NA	NA	NA	NA
WP_052059440.1\|3627996_3628557_-	hypothetical protein	NA	NA	NA	NA
WP_038648425.1\|3628687_3629029_-	hypothetical protein	A0A2H4J1A5	uncultured_Caudovirales_phage	8.2e-29	51.3
WP_081946756.1\|3629028_3629565_-	hypothetical protein	A0A2H4J1B2	uncultured_Caudovirales_phage	5.2e-70	73.3
WP_167540460.1\|3629987_3630488_-	glycoside hydrolase family protein	A0A2H4JCH1	uncultured_Caudovirales_phage	2.3e-80	84.9
WP_038648433.1\|3630759_3631209_-	DUF1367 family protein	A0A2R2Z328	Escherichia_phage	8.2e-53	64.4
WP_038648436.1\|3631353_3631593_-	hypothetical protein	NA	NA	NA	NA
WP_038648439.1\|3631589_3631883_-	hypothetical protein	K7PHK7	Enterobacteria_phage	4.9e-22	55.7
WP_038650238.1\|3631964_3632363_-	Rha family transcriptional regulator	A0A2I7RX10	Vibrio_phage	8.1e-20	50.4
WP_038648442.1\|3632374_3632671_-	hypothetical protein	A5VW96	Enterobacteria_phage	7.6e-23	60.2
WP_038648445.1\|3632879_3634043_+\|integrase	site-specific integrase	A0A0M4R586	Salmonella_phage	5.2e-168	73.2
WP_038650240.1\|3634303_3634807_-	DUF1198 family protein	NA	NA	NA	NA
WP_034828233.1\|3634983_3635850_+	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	2.0e-31	36.2
WP_038648448.1\|3635849_3636062_+	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_038648451.1\|3636308_3637694_-\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	5.1e-45	34.8
3638802:3638815	attR	NA	NA	NA	NA

DBSCAN-SWA_6

3731270 : 3738974

uncultured_Mediterranean_phage(50.0%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038648599.1\|3731270_3731741_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	5.1e-29	46.1
WP_038648601.1\|3731834_3732938_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	1.4e-48	34.9
WP_034831027.1\|3732941_3733391_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_038648604.1\|3733563_3734001_+	peptidoglycan-binding protein LysM	G3MBQ1	Bacillus_virus	1.6e-05	50.0
WP_038648605.1\|3734016_3734580_+	DUF3251 domain-containing protein	NA	NA	NA	NA
WP_038648607.1\|3734639_3735608_-	protein translocase subunit SecF	A0A1B1IVP7	uncultured_Mediterranean_phage	7.2e-46	41.1
WP_071845629.1\|3735618_3737466_-	protein translocase subunit SecD	NA	NA	NA	NA
WP_034831018.1\|3737491_3737824_-	preprotein translocase subunit YajC	A0A1B1IVR5	uncultured_Mediterranean_phage	2.6e-11	36.3
WP_038648613.1\|3737849_3738974_-\|tRNA	tRNA guanosine(34) transglycosylase Tgt	A0A1B1IVQ4	uncultured_Mediterranean_phage	3.2e-90	45.8

DBSCAN-SWA_7

3807867 : 3816608

Streptococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038648738.1\|3807867_3809613_-	amylovoran biosynthesis protein AmsF	A0A1S6L3G8	Erwinia_phage	2.2e-146	45.4
WP_038648740.1\|3809814_3810108_-	hypothetical protein	NA	NA	NA	NA
WP_038648743.1\|3810104_3810455_-	hypothetical protein	A0A286N2Q7	Klebsiella_phage	1.2e-22	50.9
WP_038648745.1\|3810451_3810919_-	hypothetical protein	H9C148	Vibrio_phage	5.6e-28	46.0
WP_071845630.1\|3811100_3811379_-	hypothetical protein	NA	NA	NA	NA
WP_038648747.1\|3811792_3812524_-	helix-turn-helix transcriptional regulator	A0A2I6PIE7	Escherichia_phage	5.1e-44	36.2
WP_038648750.1\|3812876_3814130_-	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	3.0e-92	44.0
WP_038648752.1\|3814140_3815244_-	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.3e-59	42.3
WP_038648755.1\|3815489_3816608_+	porin OmpC	Q1MVN1	Enterobacteria_phage	3.5e-113	57.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009454

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection