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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009290 Pseudomonas chlororaphis subsp. aurantiaca strain JD37 chromosome, complete genome 3 crisprs csa3,cas3,DEDDh,cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1,DinG,WYL 0 9 8 0

Results visualization

1. NZ_CP009290
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009290_1 1346803-1347430 TypeI-F I-F
10 spacers
cas6f,cas7f,cas5f,cas8f,cas3-cas2,cas1

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009290_2 3670380-3670464 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009290_3 5675857-5676245 Orphan I-F
6 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009290_1 1.2|1346891|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder 1346891-1346922 32 NZ_CP015602 Pseudomonas antarctica strain PAMC 27494 plasmid pP27494_2, complete sequence 8507-8538 1 0.969
NZ_CP009290_1 1.7|1347191|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder 1347191-1347222 32 MG707188 Pseudomonas phage TC7, partial genome 16298-16329 2 0.938
NZ_CP009290_1 1.7|1347191|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder 1347191-1347222 32 MH622927 Podoviridae sp. isolate ctdc_1, complete genome 36194-36225 5 0.844
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP017304 Rhodococcus sp. YL-1 plasmid pYLL2 sequence 15440-15470 5 0.839
NZ_CP009290_1 1.7|1347191|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder 1347191-1347222 32 NC_005262 Burkholderia cepacia phage Bcep22, complete genome 14005-14036 6 0.812
NZ_CP009290_3 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5676126-5676156 31 NZ_CP010742 Phaeobacter inhibens strain P59 plasmid pP59_a, complete sequence 131085-131115 6 0.806
NZ_CP009290_3 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5676126-5676156 31 NZ_CP010618 Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_a, complete sequence 135186-135216 6 0.806
NZ_CP009290_3 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5676126-5676156 31 NZ_CP010746 Phaeobacter inhibens strain P48 isolate M21-2.3 plasmid pP48_a, complete sequence 128598-128628 6 0.806
NZ_CP009290_3 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675886-5675916 31 NZ_CP010616 Phaeobacter inhibens strain P92 plasmid pP92_f, complete sequence 3879-3909 7 0.774
NZ_CP009290_3 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675886-5675916 31 NZ_CP010635 Phaeobacter inhibens strain P78 plasmid pP78_f, complete sequence 3879-3909 7 0.774
NZ_CP009290_3 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675886-5675916 31 NZ_CP010755 Phaeobacter inhibens strain P70 plasmid pP70_f, complete sequence 3879-3909 7 0.774
NZ_CP009290_3 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675886-5675916 31 NZ_CP010713 Phaeobacter inhibens strain P66 plasmid pP66_h, complete sequence 3879-3909 7 0.774
NZ_CP009290_3 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675886-5675916 31 NZ_CP010740 Phaeobacter inhibens strain P72 plasmid pP72_e, complete sequence 3879-3909 7 0.774
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NC_017966 Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence 51471-51501 7 0.774
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NC_019387 Thermus oshimai JL-2 plasmid pTHEOS01, complete sequence 26237-26267 7 0.774
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NC_016586 Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence 403827-403857 7 0.774
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP008817 Ochrobactrum anthropi strain OAB plasmid 1, complete sequence 155476-155506 7 0.774
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP039644 Azospirillum sp. TSA2s plasmid p2, complete sequence 161718-161748 7 0.774
NZ_CP009290_3 3.4|5676066|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5676066-5676096 31 NC_013856 Azospirillum sp. B510 plasmid pAB510b, complete sequence 618527-618557 7 0.774
NZ_CP009290_3 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5676126-5676156 31 NZ_CP045090 Burkholderia glumae strain GX plasmid pWSGX2, complete sequence 72037-72067 7 0.774
NZ_CP009290_3 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675886-5675916 31 NZ_CP045390 Roseivivax sp. THAF30 plasmid pTHAF30_a, complete sequence 62450-62480 8 0.742
NZ_CP009290_3 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675886-5675916 31 NZ_CP045362 Roseivivax sp. THAF40 plasmid pTHAF40_b, complete sequence 62454-62484 8 0.742
NZ_CP009290_3 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675886-5675916 31 NZ_CP049039 Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_2, complete sequence 36521-36551 8 0.742
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 AP021851 Deinococcus grandis ATCC 43672 plasmid: pDEGR-2 DNA, complete genome 252857-252887 8 0.742
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP032322 Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence 363567-363597 8 0.742
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP017664 Cronobacter sp. JZ38 plasmid unnamed2, complete sequence 73779-73809 8 0.742
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP044073 Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence 3141-3171 8 0.742
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP007794 Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence 761629-761659 8 0.742
NZ_CP009290_3 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5676126-5676156 31 NZ_CP013426 Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence 78044-78074 8 0.742
NZ_CP009290_1 1.4|1347011|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder 1347011-1347042 32 NZ_LR027556 Epibacterium mobile isolate EPIB1 plasmid 4, complete sequence 19965-19996 9 0.719
NZ_CP009290_1 1.7|1347191|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder 1347191-1347222 32 KU873925 Pseudomonas phage pf16, complete genome 75028-75059 9 0.719
NZ_CP009290_1 1.8|1347251|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder 1347251-1347282 32 NC_015583 Novosphingobium sp. PP1Y plasmid Mpl, complete sequence 313768-313799 9 0.719
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP020371 Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence 265604-265634 9 0.71
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP020371 Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence 69190-69220 9 0.71
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NC_014214 Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence 97156-97186 9 0.71
NZ_CP009290_3 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5675946-5675976 31 NZ_CP031358 Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence 389113-389143 9 0.71
NZ_CP009290_3 3.3|5676006|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT 5676006-5676036 31 NZ_CP046573 Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence 265026-265056 9 0.71
NZ_CP009290_1 1.8|1347251|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder 1347251-1347282 32 LR606148 Rhizobium sp. Q54 genome assembly, plasmid: 5 359252-359283 10 0.688

1. spacer 1.2|1346891|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder matches to NZ_CP015602 (Pseudomonas antarctica strain PAMC 27494 plasmid pP27494_2, complete sequence) position: , mismatch: 1, identity: 0.969

ggggcgatttatccggggcttagcgcccgaag	CRISPR spacer
ggggcgatttatccgggtcttagcgcccgaag	Protospacer
***************** **************

2. spacer 1.7|1347191|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder matches to MG707188 (Pseudomonas phage TC7, partial genome) position: , mismatch: 2, identity: 0.938

ttcttttgggtccatacacacaaccagcgtcc	CRISPR spacer
ttcgcttgggtccatacacacaaccagcgtcc	Protospacer
*** .***************************

3. spacer 1.7|1347191|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder matches to MH622927 (Podoviridae sp. isolate ctdc_1, complete genome) position: , mismatch: 5, identity: 0.844

ttcttttgggtccatacacacaaccagcgtcc	CRISPR spacer
ctcttttgggtccagacacacaacccgcgttt	Protospacer
.************* ********** ****..

4. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017304 (Rhodococcus sp. YL-1 plasmid pYLL2 sequence) position: , mismatch: 5, identity: 0.839

ccacgc-agctggccctgcaggcggcccagta	CRISPR spacer
-cactcgggctggccctgcaggaggcccggta	Protospacer
 *** * .************** *****.***

5. spacer 1.7|1347191|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder matches to NC_005262 (Burkholderia cepacia phage Bcep22, complete genome) position: , mismatch: 6, identity: 0.812

ttcttttgggtccatacacacaaccagcgtcc	CRISPR spacer
cacgctggggtccatacacacaaccagcgttc	Protospacer
. * .* ***********************.*

6. spacer 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010742 (Phaeobacter inhibens strain P59 plasmid pP59_a, complete sequence) position: , mismatch: 6, identity: 0.806

ttgccagtggtgtcgagaatcgccgcgtcac	CRISPR spacer
tttccagtggtgtcgataatcgccaggccag	Protospacer
** ************* *******. *.** 

7. spacer 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010618 (Phaeobacter inhibens strain P30 isolate M4-3.1A plasmid pP30_a, complete sequence) position: , mismatch: 6, identity: 0.806

ttgccagtggtgtcgagaatcgccgcgtcac	CRISPR spacer
tttccagtggtgtcgataatcgccaggccag	Protospacer
** ************* *******. *.** 

8. spacer 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010746 (Phaeobacter inhibens strain P48 isolate M21-2.3 plasmid pP48_a, complete sequence) position: , mismatch: 6, identity: 0.806

ttgccagtggtgtcgagaatcgccgcgtcac	CRISPR spacer
tttccagtggtgtcgataatcgccaggccag	Protospacer
** ************* *******. *.** 

9. spacer 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010616 (Phaeobacter inhibens strain P92 plasmid pP92_f, complete sequence) position: , mismatch: 7, identity: 0.774

-cagtcctacaacgctggccgcgaagcgcaga	CRISPR spacer
gcag-cctacaacgctggccccgatgcggtag	Protospacer
 *** *************** *** ***  ..

10. spacer 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010635 (Phaeobacter inhibens strain P78 plasmid pP78_f, complete sequence) position: , mismatch: 7, identity: 0.774

-cagtcctacaacgctggccgcgaagcgcaga	CRISPR spacer
gcag-cctacaacgctggccccgatgcggtag	Protospacer
 *** *************** *** ***  ..

11. spacer 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010755 (Phaeobacter inhibens strain P70 plasmid pP70_f, complete sequence) position: , mismatch: 7, identity: 0.774

-cagtcctacaacgctggccgcgaagcgcaga	CRISPR spacer
gcag-cctacaacgctggccccgatgcggtag	Protospacer
 *** *************** *** ***  ..

12. spacer 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010713 (Phaeobacter inhibens strain P66 plasmid pP66_h, complete sequence) position: , mismatch: 7, identity: 0.774

-cagtcctacaacgctggccgcgaagcgcaga	CRISPR spacer
gcag-cctacaacgctggccccgatgcggtag	Protospacer
 *** *************** *** ***  ..

13. spacer 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010740 (Phaeobacter inhibens strain P72 plasmid pP72_e, complete sequence) position: , mismatch: 7, identity: 0.774

-cagtcctacaacgctggccgcgaagcgcaga	CRISPR spacer
gcag-cctacaacgctggccccgatgcggtag	Protospacer
 *** *************** *** ***  ..

14. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NC_017966 (Tistrella mobilis KA081020-065 plasmid pTM2, complete sequence) position: , mismatch: 7, identity: 0.774

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
tcgagcagatggccctgcaggcggcccgaga	Protospacer
.*. **** ******************.. *

15. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NC_019387 (Thermus oshimai JL-2 plasmid pTHEOS01, complete sequence) position: , mismatch: 7, identity: 0.774

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
acgcccacctggccctgcaggtggcccagag	Protospacer
 *.* ** *************.******* .

16. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NC_016586 (Azospirillum lipoferum 4B plasmid AZO_p2, complete sequence) position: , mismatch: 7, identity: 0.774

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
ccacgcaggtcgccctgcaggcgggcggggt	Protospacer
******** * ************* * .*  

17. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008817 (Ochrobactrum anthropi strain OAB plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
tcgcgcagctggcccagcaggtggccgaaga	Protospacer
.*.************ *****.**** *. *

18. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP039644 (Azospirillum sp. TSA2s plasmid p2, complete sequence) position: , mismatch: 7, identity: 0.774

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
caggggagatggcccagcaggcggcccagga	Protospacer
* . * ** ****** ************* *

19. spacer 3.4|5676066|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NC_013856 (Azospirillum sp. B510 plasmid pAB510b, complete sequence) position: , mismatch: 7, identity: 0.774

cccacagcatgactcgtcgaggtctacagcc	CRISPR spacer
ccatgcccatgccgcgtcgaggtctacagcc	Protospacer
**     **** * *****************

20. spacer 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045090 (Burkholderia glumae strain GX plasmid pWSGX2, complete sequence) position: , mismatch: 7, identity: 0.774

ttgccagtggtgtcgagaatcgccg-cgtcac	CRISPR spacer
attccagcggtgtcgagaatcgacgccggcg-	Protospacer
 * ****.************** ** ** *. 

21. spacer 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045390 (Roseivivax sp. THAF30 plasmid pTHAF30_a, complete sequence) position: , mismatch: 8, identity: 0.742

cagtcctacaacgctggccgcgaagcgcaga	CRISPR spacer
tttgccgacaactctggccgcgaagcgcact	Protospacer
.   ** ***** ****************  

22. spacer 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045362 (Roseivivax sp. THAF40 plasmid pTHAF40_b, complete sequence) position: , mismatch: 8, identity: 0.742

cagtcctacaacgctggccgcgaagcgcaga	CRISPR spacer
tttgccgacaactctggccgcgaagcgcact	Protospacer
.   ** ***** ****************  

23. spacer 3.1|5675886|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP049039 (Pseudohalocynthiibacter aestuariivivens strain RR4-35 plasmid pRR4-35_2, complete sequence) position: , mismatch: 8, identity: 0.742

cagtcctacaacgctggccgcgaagcgcaga	CRISPR spacer
tttgccgacaactctggccgcgaagcgcact	Protospacer
.   ** ***** ****************  

24. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to AP021851 (Deinococcus grandis ATCC 43672 plasmid: pDEGR-2 DNA, complete genome) position: , mismatch: 8, identity: 0.742

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
tcacgcagcgggccctgcaggcgtttccgcg	Protospacer
.******** ************* ..* *..

25. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032322 (Azospirillum brasilense strain MTCC4035 plasmid p1, complete sequence) position: , mismatch: 8, identity: 0.742

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
aggccaagctggcgcttcaggcggcccagca	Protospacer
  .*  ******* ** ************.*

26. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017664 (Cronobacter sp. JZ38 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
ccgtccagcatgccctgcaggcggcccatcg	Protospacer
**.. ****  ***************** ..

27. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044073 (Pseudomonas oryzihabitans strain FDAARGOS_657 plasmid unnamed2, complete sequence) position: , mismatch: 8, identity: 0.742

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
cggtcgagcaggccctgcaggcggcgcagca	Protospacer
* ..  *** *************** ***.*

28. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007794 (Azospirillum brasilense strain Az39 plasmid AbAZ39_p1, complete sequence) position: , mismatch: 8, identity: 0.742

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
aggccaagctggcgcttcaggcggcccagca	Protospacer
  .*  ******* ** ************.*

29. spacer 3.5|5676126|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013426 (Burkholderia sp. MSMB0856 plasmid pMSMB0856, complete sequence) position: , mismatch: 8, identity: 0.742

ttgccagtggtgtcgagaatcgccgcgtcac	CRISPR spacer
atctcgatggtgtcgagaatcgtcgcggcaa	Protospacer
 * .*..***************.**** ** 

30. spacer 1.4|1347011|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder matches to NZ_LR027556 (Epibacterium mobile isolate EPIB1 plasmid 4, complete sequence) position: , mismatch: 9, identity: 0.719

agcgaagagaaccgtctgccttgtcctgtcat	CRISPR spacer
ggcctccagaactgcctgccttgtcctgtcga	Protospacer
.**    *****.*.***************. 

31. spacer 1.7|1347191|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder matches to KU873925 (Pseudomonas phage pf16, complete genome) position: , mismatch: 9, identity: 0.719

ttcttttgggtccatacacacaaccagcgtcc	CRISPR spacer
ggccgttgggcccatacacaccaccagctttt	Protospacer
  *. *****.********** ****** *..

32. spacer 1.8|1347251|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder matches to NC_015583 (Novosphingobium sp. PP1Y plasmid Mpl, complete sequence) position: , mismatch: 9, identity: 0.719

agcacctcagggctgccgtcatggatcaagtt	CRISPR spacer
tgcacctccgggctgccggcatggggccatgg	Protospacer
 ******* ********* *****. * *   

33. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 9, identity: 0.71

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
tggaggagctggcccagcaggcggcgcaggg	Protospacer
. . * ********* ********* *** .

34. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020371 (Candidatus Thiodictyon syntrophicum strain Cad16T plasmid pTs417, complete sequence) position: , mismatch: 9, identity: 0.71

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
tggaggagctggcccagcaggcggcgcaggg	Protospacer
. . * ********* ********* *** .

35. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NC_014214 (Meiothermus silvanus DSM 9946 plasmid pMESIL02, complete sequence) position: , mismatch: 9, identity: 0.71

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
aggcccagctggccctgctggccgcccacgg	Protospacer
  .* ************* *** *****  .

36. spacer 3.2|5675946|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031358 (Erythrobacter aureus strain YH-07 plasmid unnamed, complete sequence) position: , mismatch: 9, identity: 0.71

ccacgcagctggccctgcaggcggcccagta	CRISPR spacer
ttcaagagcaggccctgcaggcgtcccagaa	Protospacer
..  . *** ************* ***** *

37. spacer 3.3|5676006|31|NZ_CP009290|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 9, identity: 0.71

gtactgcatcccgaaatccgggtgccaccat	CRISPR spacer
cctcggcataccggaatccgggtgccacgta	Protospacer
 . * **** ***.**************   

38. spacer 1.8|1347251|32|NZ_CP009290|CRT,PILER-CR,CRISPRCasFinder matches to LR606148 (Rhizobium sp. Q54 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.688

agcacctcagggctgccgtcatggatcaagtt	CRISPR spacer
caggtgagaggcctgcagtcatggatcaagtt	Protospacer
 . ..   *** **** ***************

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 23248 : 89577 59 Shigella_phage(20.0%) transposase,protease NA
DBSCAN-SWA_2 126369 : 187787 57 Bacillus_phage(30.0%) transposase,plate NA
DBSCAN-SWA_3 498059 : 572515 56 Bacillus_virus(20.0%) transposase,holin NA
DBSCAN-SWA_4 2422250 : 2470242 45 Moraxella_phage(28.57%) tRNA,protease,coat NA
DBSCAN-SWA_5 2889476 : 2986022 109 Pseudomonas_phage(45.24%) terminase,integrase,lysis,capsid,transposase,tail attL 2913280:2913338|attR 2951361:2951419
DBSCAN-SWA_6 4157511 : 4170765 13 Escherichia_phage(100.0%) transposase,bacteriocin NA
DBSCAN-SWA_7 5240844 : 5330054 93 Pseudomonas_phage(44.23%) protease,plate,lysis,tRNA,holin,tail NA
DBSCAN-SWA_8 6226174 : 6297148 79 Pseudomonas_phage(65.79%) terminase,head,integrase,plate,lysis,tRNA,portal,capsid,transposase,tail attL 6267692:6267711|attR 6302649:6302668
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage