CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009610	Haemophilus influenzae strain Hi375 chromosome, complete genome	3 crisprs	DinG,DEDDh,cas3,WYL	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009610_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009610_1

8449-8598

Orphan

Consensus_repeat	Method
ACTTCTACTGACAAAACAACAGTAGCTGATAATTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009610_1

>merge|NZ_CP009610|1|8449-8598|CRISPRCasFinder
ACTTCTACTGAAGAAACAACAGTAACTTCTACTGACAAAACAACAGTAGCTGATAATTCAAAAAGCAGTAAGCCAAATCGTAGACATAGAAGAAGTGTTAGCCAGCCTCAAGAGACTTCTACTGAAAAAACAACAGTAGCTGATAATTCA

>NZ_CP009610|1|1|8449-8598|CRISPRCasFinder
ACTTCTACTGAAGAAACAACAGTAACTTCTACTGAC	AAAACAACAGTAGCTGATAATTCAAAAAGCAGTAAGCCAAATCGTAGACATAGAAGAAGTGTTAGCCAGCCTCAAGAG
ACTTCTACTGAAAAAACAACAGTAGCTGATAATTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009610.1\|WP_012055334.1\|15152_16274_+\|DNA-protecting-protein-DprA	unknown	unknown	gnl\|CDD\|223829
NZ_CP009610.1\|WP_038440280.1\|13061_14609_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|234864
NZ_CP009610.1\|WP_005688363.1\|2479_3559_+\|DNA-replication/repair-protein-RecF	unknown	unknown	gnl\|CDD\|273173
NZ_CP009610.1\|WP_005688368.1\|16326_17103_+\|peroxide-stress-protein-YaaA	unknown	unknown	gnl\|CDD\|234999
NZ_CP009610.1\|WP_038440279.1\|11899_12976_-\|3-isopropylmalate-dehydrogenase	unknown	unknown	gnl\|CDD\|234832
NZ_CP009610.1\|WP_011272333.1\|10313_11723_-\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP009610.1\|WP_005659251.1\|18976_19462_+\|SsrA-binding-protein-SmpB	unknown	unknown	gnl\|CDD\|235455
NZ_CP009610.1\|WP_038440278.1\|9686_10289_-\|3-isopropylmalate-dehydratase-small-subunit	unknown	unknown	gnl\|CDD\|179314
NZ_CP009610.1\|WP_038440275.1\|0_1365_+\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
NZ_CP009610.1\|WP_005659252.1\|17772_18738_+\|6-phosphofructokinase	unknown	unknown	gnl\|CDD\|235111
NZ_CP009610.1\|WP_005651583.1\|19556_19856_-\|DNA-binding-transcriptional-regulator-Fis	unknown	unknown	gnl\|CDD\|179020
NZ_CP009610.1\|WP_005651586.1\|17095_17677_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009610.1\|WP_038440276.1\|1377_2478_+\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541

Protein	Function_ID	Function_description	E-value
NZ_CP009610.1\|WP_012055334.1\|15152_16274_+\|DNA-protecting-protein-DprA	gnl\|CDD\|223829	COG0758, Smf, Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake [DNA replication, recombination, and repair / Intracellular trafficking and secretion].	5.07778e-139
NZ_CP009610.1\|WP_038440280.1\|13061_14609_-\|2-isopropylmalate-synthase	gnl\|CDD\|234864	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated.	0
NZ_CP009610.1\|WP_005688363.1\|2479_3559_+\|DNA-replication/repair-protein-RecF	gnl\|CDD\|273173	TIGR00611, DNA_replication_and_repair_protein_RecF, recF protein. All proteins in this family for which functions are known are DNA binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair].	7.82311e-179
NZ_CP009610.1\|WP_005688368.1\|16326_17103_+\|peroxide-stress-protein-YaaA	gnl\|CDD\|234999	PRK02101, PRK02101, peroxide stress protein YaaA.	2.57044e-149
NZ_CP009610.1\|WP_038440279.1\|11899_12976_-\|3-isopropylmalate-dehydrogenase	gnl\|CDD\|234832	PRK00772, PRK00772, 3-isopropylmalate dehydrogenase; Provisional.	0
NZ_CP009610.1\|WP_011272333.1\|10313_11723_-\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP009610.1\|WP_005659251.1\|18976_19462_+\|SsrA-binding-protein-SmpB	gnl\|CDD\|235455	PRK05422, smpB, SsrA-binding protein SmpB.	1.55567e-87
NZ_CP009610.1\|WP_038440278.1\|9686_10289_-\|3-isopropylmalate-dehydratase-small-subunit	gnl\|CDD\|179314	PRK01641, leuD, 3-isopropylmalate dehydratase small subunit.	4.01041e-141
NZ_CP009610.1\|WP_038440275.1\|0_1365_+\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP009610.1\|WP_005659252.1\|17772_18738_+\|6-phosphofructokinase	gnl\|CDD\|235111	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase.	0
NZ_CP009610.1\|WP_005651583.1\|19556_19856_-\|DNA-binding-transcriptional-regulator-Fis	gnl\|CDD\|179020	PRK00430, fis, DNA-binding transcriptional regulator Fis.	5.47901e-55
NZ_CP009610.1\|WP_038440276.1\|1377_2478_+\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	1.42918e-179

>NZ_CP009610.1|WP_005688363.1|2479_3559_+|DNA-replication/repair-protein-RecF
MAISRLLVEKFRNLTAVDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGRSFKSAVTNRIISYDEPHFTLFGQIQESQHQWSVGLQKLRQGNTLVKINGEDGNKISDLAHLLPMQLITPEGLTLLNGGPSYRRAFLDWGLFHHQTSFYSAWSNLNRLLKQRNAALAQNQPYSAIKIWDVELAKLAHQVSQWRAEYAEALRPEIEQTCQLFLPELEINVSFHQGWEKNADYYEILQQNFERDRALNYTFSGPQKADFRFKAQGLPVEDVLSRGQLKLLMCALRLAQGEHLMKEKQRHCIFLIDDFASELDQYKRALLAERLQQSGSQVFVTAITQRQLKEMQVENKKMFSVHNGIINALN
>NZ_CP009610.1|WP_038440276.1|1377_2478_+|DNA-polymerase-III-subunit-beta
MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDNRLTITGTDLEVELSSQTQLSSSSENGTFTIPAKKFLDICRTLSDDSEITVTFEEDRALVQSGRSRFTLTTQPAEEYPNLTDWQSEVDFQLPQNTLRRLIESTQFSMANQDARYFLNGMKFETEGNLLRTVATDGHRLAVCTISLEQELQNHSVILPRKGVLELVRLLETNDELARLQIGTNNLRVHLKNTVFTSKLIDGRFPDYRRVLPRNATKIVEGNWEMLKQAFVRASILSNERARSVRLSLKENQLKITASNTEHEEAEEIVDVNYNGEELEVGFNVTYILDVLNALKCNQVRMRLTDAFSSCLIENCEDSSCEYVIMPMRL
>NZ_CP009610.1|WP_038440275.1|0_1365_+|chromosomal-replication-initiator-protein-DnaA
MNLSNLWQSCLLQLQDQVSASDLSTWLRPLQADVVSNNHIVLYASNMFVKGWVETHYLAQIQQICQTLAQNPELRISLKEGVKPAPKIVESTPNTSLRSESAVDFQAESSASVKFESHLNTKHLFDNFVEGKSNQLARAVGQKLAQAPGEPSANPFFLYGGTGLGKTHLLHAIGNGILADKPNARVLYIHANNFMQHMVKAVRDNKMDQFKKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNSLFETGRQIILTSDRYPKEIEKIEERLKSRFGWGLTTAIEPPDLETRVAILLKKAEEHNMNLPEEVAFFIAQRLRTNVRELEGALNRVKAMQDFKGGDIDIDFVRDTLKDILALQERLVTIENIQKVVAEYYRIKVSDLKSKSRARSVTRPRQIAMALAKELTNRSLPEIGRAFDRDHTTVLNACREVPKFREQDNSIQEDWANLIRTLSA
>NZ_CP009610.1|WP_038440278.1|9686_10289_-|3-isopropylmalate-dehydratase-small-subunit
MAGFKQLSGLVVPLDAANVDTDAIIPKQFLQAITRVGFGKHLFHEWRYLDVDGTKPNPEFVLNYPRYQGATILLARKNLGCGSSREHAPWALADYGFKVMIAPSFADIFYNNSLNNHMLPIRLSEEEVEEIFQWVWANDGKQIHVDLEAMTVTVGDKVYHFELDEFRRHCLLNGLDNIGLTLQHEDKISAYEKNIPAFLR
>NZ_CP009610.1|WP_011272333.1|10313_11723_-|3-isopropylmalate-dehydratase-large-subunit
MAKTLYEKLFDSHIVYEAEGETPILYINRHLIHEVTSPQAFDGLRVANRQVRQVNKTFGTMDHSISTQVRDVNKLEGQAKIQVLELDKNTKATGIKLFDITTKEQGIVHVMGPEQGLTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQARAKSMKIEVRGKVASGITAKDIILAIIGKTTMAGGTGHVVEFCGEAIRDLSMEGRMTVCNMAIEMGAKAGLIAPDETTFAYLKDRPHAPKGKDWDDAVAYWKTLKSDDDAQFDTVVTLEAKDIAPQVTWGTNPGQVISVNETIPNPQEMADPVQRASAEKALHYIGLEAGTNLKDIKVDQVFIGSCTNSRIEDLRAAAAVMKGRKKADNVKRILVVPGSGLVKEQAEKEGLDKIFIAAGAEWRNPGCSMCLGMNDDRLGEWERCASTSNRNFEGRQGRNGRTHLVSPAMAAAAGMFGKFVDIREVALN
>NZ_CP009610.1|WP_038440279.1|11899_12976_-|3-isopropylmalate-dehydrogenase
MQSYNIAVLAGDGIGPEVMAEAIKVLNKVQEKFGFKLNFNEFFVGGAAIDHCGYPLPAETLKGCDEADAILFGSVGGPKWTNLPPDQQPERGALLPLRKYFKLFCNLRPATLYKGLEKFCPLRADIAAKGFDMVVVRELTGGIYFGQPKGREGDGTQTKAFDTEVYYKYEIERIARAAFDAAMKRNKKVTSVDKANVLQSSILWRETVTEMAKDYPEVTLEHIYIDNATMQLIKAPESFDVLLCSNIFGDIISDEAAMITGSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAADAIESAVQKVLASGHRTADLADDSTPVSTAEMGTLITQAI
>NZ_CP009610.1|WP_038440280.1|13061_14609_-|2-isopropylmalate-synthase
MTDRVIIFDTTLRDGEQALKASLTVKEKLQIALALERLGVDVMEVGFPVSSQGDFESVQTIARHIKNARVAALSRAVDKDIDAAYEALKVAEAFRIHTFIASSALHVEAKLKRSFDDVVGMAVAAVKRARNYTDDVEFSCEDAGRTGIDNICRIVEAAINAGATTVNIPDTVGFCLPNEYGNIIAQVRNRVPNIDKAVISVHCHNDLGMATANSLTAVQNGARQIECTINGIGERAGNTSLEEVVMAMKVRQDFMGVDTRINTQEIHRVSQMVSQLCNMPIQPNKAIVGSNAFAHSSGIHQDGMLKNKNTYEIMSPETIGLKKEKLNLTARSGRAAVKGHMTDMGYNEQDYDLDKLYDAFLKLADKKGQVFDYDLEALAFIDMQQGDEDRLVLDKLSAHSTKEYPATAFVQLKLDGEKLSTSSIGGNGPVDAVYNAILNLTGLEIKMSHYNLTAKGEGAEALGQVDIVVEHKGRKFHGVGLATDIVESSALALVHAINAIYRAHKVADIKNHKQH
>NZ_CP009610.1|WP_012055334.1|15152_16274_+|DNA-protecting-protein-DprA
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAIQIRRWFKPEAKFIEPALAWSQKEGNHLVNYFSPFYPFLLKQTANFPPLLFVKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALGIDGHCHQAVVNIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEFLPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITARYALEQNREVFAVPGNIQNESSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFDQIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFNLSVDVLLVQLLDLELQDLIISENGLYKRV
>NZ_CP009610.1|WP_005688368.1|16326_17103_+|peroxide-stress-protein-YaaA
MLAIISPAKTLDFESAVKNFPVSQPHFTDYSEQLIEVCRKLSPQDLSSLMSISDKLAGLNAARFAEWTKIHNEDNSRPALFAFKGDVYTGLDADSLSEDDVIFAQSHLRMLSGLYGLLKPLDLMQPYRLEMGTKLANPKGKDLYAFWGNVITQAVQQAIDAQGDNVLVNLASDEYYKSVKENQLNAKIIKPVFLDNKNGKYKVISFYAKKARGLMCRYLIQHRLTNIEQLKEFDLAGYWFDSASSTETEFVFKRDINE
>NZ_CP009610.1|WP_005651586.1|17095_17677_+|hypothetical-protein
MNKIFVILTALILSGCATKLTQLNVPTQLEYNGKHYVLTGSQDLGTIARYAYISKPDTLENWQSEIEILFDRNQPARSIKERIALRERIYRNTDVKDFHFDTIPENSTNPNELNGYVIYSPTKENPSWQVNVMKGRQLPQCGFVQFQYSQKIQQPTRSKHLSVDKVQQHLQKYVVDIERKHLQNLKWQLFCEK
>NZ_CP009610.1|WP_005659252.1|17772_18738_+|6-phosphofructokinase
MIKKIAVLTSGGDAPGMNAAIRGVVRSALAEGLEVFGIYDGYQGLYNNKIKQLNRYSVSDVINRGGTFLGSARFPEFKDPNIRAKCAEILRSHGIDALVVIGGDGSYMGAKLLTEEHCFPCVGLPGTIDNDVAGTDYTIGYQTALQTAVDAIDRLRDTSSSHQRISIVEIMGRHCSDLTISAGIAGGCEYIVASEIEFNREELIQQIERSIIRGKRHAIIAITELLTDVHSLAKEIEARVGHETRATVLGHIQRGGSPCAFDRILASRMGAYAVDLLLQGKGGYCVGIQNEQLVHHDIIDAINNMQRVFKADWLKVAKRLE
>NZ_CP009610.1|WP_005659251.1|18976_19462_+|SsrA-binding-protein-SmpB
MTKKKVKPNSNTIALNKRARHDYFIEDEIEAGLELQGWEVKSIRAGKANISDSYVIFKNGEAFLFGASIQPLNVASTHIVCDPTRTRKLLLNKRELASLFGKANRDGFTIVALSLYWKSAWAKVKIGLAKGKKQQDKRDDIKEREWKVTKDRIMKNAHRRS
>NZ_CP009610.1|WP_005651583.1|19556_19856_-|DNA-binding-transcriptional-regulator-Fis
MLEQQRNSADALTVSVLNAQSQVTSKPLRDSVKQALRNYLAQLDGQDVNDLYELVLAEVEHPMLDMIMQYTRGNQTRAANMLGINRGTLRKKLKKYGMG

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Crispr_ID: NZ_CP009610_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009610_2

1134720-1134868

Orphan

Consensus_repeat	Method
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP009610_2

>merge|NZ_CP009610|2|1134720-1134868|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGTCGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTTTATAATGTGAAATTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

>NZ_CP009610|2|2|1134720-1134868|CRISPRCasFinder
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCGACCTTGGCAAGGT	CGTGCTCTACCAACTGAGCTATTCCCGCAATAATGCTTTTATAATGTGAAA
TTGGAGCGGGAAACGAGGCTCGAACTCGCGACCCCAACCTTGGCAAGGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009610.1\|WP_038441000.1\|1142027_1143383_+\|two-component-system-sensor-histidine-kinase-QseC	unknown	unknown	gnl\|CDD\|182388
NZ_CP009610.1\|WP_005688053.1\|1124234_1125569_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|235434
NZ_CP009610.1\|WP_038440997.1\|1126769_1129115_-\|penicillin-binding-protein-1B	unknown	unknown	gnl\|CDD\|273952
NZ_CP009610.1\|WP_005649958.1\|1129956_1130763_+\|type-I-methionyl-aminopeptidase	unknown	unknown	gnl\|CDD\|235576
NZ_CP009610.1\|WP_005688044.1\|1133522_1134590_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	unknown	unknown	gnl\|CDD\|131433
NZ_CP009610.1\|WP_005688032.1\|1140936_1141302_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	unknown	unknown	gnl\|CDD\|129260
NZ_CP009610.1\|WP_038441002.1\|1143648_1145676_+\|BCCT-family-transporter	unknown	unknown	gnl\|CDD\|224211
NZ_CP009610.1\|WP_005658248.1\|1145711_1147187_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP009610.1\|WP_011272760.1\|1137144_1138872_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	unknown	unknown	gnl\|CDD\|183017
NZ_CP009610.1\|WP_005670302.1\|1129476_1129821_-\|iron-sulfur-cluster-insertion-protein-ErpA	unknown	unknown	gnl\|CDD\|184186
NZ_CP009610.1\|WP_011272763.1\|1130856_1133448_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	unknown	unknown	gnl\|CDD\|234980
NZ_CP009610.1\|WP_038440999.1\|1141365_1142031_+\|response-regulator	unknown	unknown	gnl\|CDD\|182387
NZ_CP009610.1\|WP_011272761.1\|1136807_1137065_+\|phosphocarrier-protein-Hpr	unknown	unknown	gnl\|CDD\|182777
NZ_CP009610.1\|WP_011272764.1\|1129121_1129475_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|225654
NZ_CP009610.1\|WP_005661057.1\|1125724_1126597_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|237571
NZ_CP009610.1\|WP_038440993.1\|1122189_1122927_+\|5-oxoprolinase-subunit-PxpA	unknown	unknown	gnl\|CDD\|212111
NZ_CP009610.1\|WP_005688055.1\|1122970_1124164_+\|divalent-metal-cation-transporter	unknown	unknown	gnl\|CDD\|224826
NZ_CP009610.1\|WP_011272762.1\|1135608_1136649_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	unknown	unknown	gnl\|CDD\|237039
NZ_CP009610.1\|WP_011272759.1\|1138931_1139432_+\|PTS-glucose-transporter-subunit-IIA	unknown	unknown	gnl\|CDD\|181859
NZ_CP009610.1\|WP_009500975.1\|1134989_1135538_-\|oligoribonuclease	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|235429

Protein	Function_ID	Function_description	E-value
NZ_CP009610.1\|WP_038441000.1\|1142027_1143383_+\|two-component-system-sensor-histidine-kinase-QseC	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	1.10254e-174
NZ_CP009610.1\|WP_005688053.1\|1124234_1125569_-\|argininosuccinate-synthase	gnl\|CDD\|235434	PRK05370, PRK05370, argininosuccinate synthase; Validated.	0
NZ_CP009610.1\|WP_038440997.1\|1126769_1129115_-\|penicillin-binding-protein-1B	gnl\|CDD\|273952	TIGR02071, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan].	0
NZ_CP009610.1\|WP_005649958.1\|1129956_1130763_+\|type-I-methionyl-aminopeptidase	gnl\|CDD\|235576	PRK05716, PRK05716, methionine aminopeptidase; Validated.	1.6579e-160
NZ_CP009610.1\|WP_005688044.1\|1133522_1134590_+\|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase	gnl\|CDD\|131433	TIGR02380, ECA_wecA, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. Members of this family are the WecA enzyme of enterobacterial common antigen biosynthesis, undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase. This family represents one narrow clade, and closely related sequences outside this clade may represent enzymes that catalyze the same specific reaction, but in the context of different pathways. A His-rich motif in a cytosolic loop of this integral membrane protein, shown critical to enzymatic activity for WecA is variously present or absent in the clade that includes Bacillus subtilis TagO teichoic acid biosynthesis enzyme, which may catalyze the same reaction as WecA. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	0
NZ_CP009610.1\|WP_005688032.1\|1140936_1141302_+\|YgiW/YdeI-family-stress-tolerance-OB-fold-protein	gnl\|CDD\|129260	TIGR00156, Uncharacterized_protein_HI_1709, TIGR00156 family protein. As of the last revision, this family consists only of two proteins from Escherichia coli and one from the related species Haemophilus influenzae. [Hypothetical proteins, Conserved].	7.86445e-56
NZ_CP009610.1\|WP_038441002.1\|1143648_1145676_+\|BCCT-family-transporter	gnl\|CDD\|224211	COG1292, BetT, Choline-glycine betaine transporter [Cell envelope biogenesis, outer membrane].	0
NZ_CP009610.1\|WP_005658248.1\|1145711_1147187_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP009610.1\|WP_011272760.1\|1137144_1138872_+\|phosphoenolpyruvate-protein-phosphotransferase-PtsI	gnl\|CDD\|183017	PRK11177, PRK11177, phosphoenolpyruvate-protein phosphotransferase PtsI.	0
NZ_CP009610.1\|WP_005670302.1\|1129476_1129821_-\|iron-sulfur-cluster-insertion-protein-ErpA	gnl\|CDD\|184186	PRK13623, PRK13623, iron-sulfur cluster insertion protein ErpA; Provisional.	3.07846e-82
NZ_CP009610.1\|WP_011272763.1\|1130856_1133448_+\|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD	gnl\|CDD\|234980	PRK01759, glnD, bifunctional uridylyltransferase/uridylyl-removing protein GlnD.	0
NZ_CP009610.1\|WP_038440999.1\|1141365_1142031_+\|response-regulator	gnl\|CDD\|182387	PRK10336, PRK10336, two-component system response regulator QseB.	2.61021e-102
NZ_CP009610.1\|WP_011272761.1\|1136807_1137065_+\|phosphocarrier-protein-Hpr	gnl\|CDD\|182777	PRK10850, PRK10850, phosphocarrier protein Hpr.	2.3023e-37
NZ_CP009610.1\|WP_011272764.1\|1129121_1129475_-\|YacL-family-protein	gnl\|CDD\|225654	COG3112, COG3112, Uncharacterized protein conserved in bacteria [Function unknown].	2.75988e-60
NZ_CP009610.1\|WP_005661057.1\|1125724_1126597_-\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|237571	PRK13961, PRK13961, phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional.	0
NZ_CP009610.1\|WP_038440993.1\|1122189_1122927_+\|5-oxoprolinase-subunit-PxpA	gnl\|CDD\|212111	cd10800, LamB_YcsF_YbgL_like, Escherichia coli putative lactam utilization protein YbgL and similar proteins. This subfamily of the LamB/YbgL family is represented by the Escherichia coli putative lactam utilization protein YbgL. Although their molecular function of member of this subfamily is unknown, they show high sequence similarity to the Aspergillus nidulans lactam utilization protein LamB, which might be required for conversion of exogenous 2-pyrrolidinone to endogenous GABA.	1.33924e-150
NZ_CP009610.1\|WP_005688055.1\|1122970_1124164_+\|divalent-metal-cation-transporter	gnl\|CDD\|224826	COG1914, MntH, Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism].	2.41376e-86
NZ_CP009610.1\|WP_011272762.1\|1135608_1136649_+\|small-ribosomal-subunit-biogenesis-GTPase-RsgA	gnl\|CDD\|237039	PRK12288, PRK12288, small ribosomal subunit biogenesis GTPase RsgA.	0
NZ_CP009610.1\|WP_011272759.1\|1138931_1139432_+\|PTS-glucose-transporter-subunit-IIA	gnl\|CDD\|181859	PRK09439, PRK09439, PTS system glucose-specific transporter subunit; Provisional.	3.01561e-101
NZ_CP009610.1\|WP_009500975.1\|1134989_1135538_-\|oligoribonuclease	gnl\|CDD\|235429	PRK05359, PRK05359, oligoribonuclease; Provisional.	3.63664e-134

>NZ_CP009610.1|WP_005688044.1|1133522_1134590_+|UDP-N-acetylglucosamine--undecaprenyl-phosphate-N-acetylglucosaminephosphotransferase
MLSIFVTFLGAFLTLIVMRPLANWIGLVDKPNYRKRHQGTIPLIGGVSLFVGNLCYYLMEWDQLRLPYLYLFSIFVLLAIGILDDRFDISPFLRAGIQAILAILMIDLGNIYLDHLGQILGPFQLTLGSIGLIITVFATIAIINAFNMIDGIDGLLGGLSCVSFAAIGILMYRDGQMDMAHWSFALIVSILPYLMLNLGIPFGPKYKVFMGDAGSTLIGFTIIWILLLSTQGKGHPMNPVTALWIIAIPLIDMVAIIYRRVRKGKSPFRPDRLHVHHLMVRAGLTSRQAFLLITFVSAVCATIGILGEVYYVNEWAMFVGFFILFFLYVYSITHAWRITRWVRRMKRRAKRLKKA
>NZ_CP009610.1|WP_011272763.1|1130856_1133448_+|bifunctional-uridylyltransferase/uridylyl-removing-protein-GlnD
MLFSPTLSSPLTPSAVKIERENLKQFELENFSRYSIFELIENRCDFYDALLIQLWQEIELSEQLGIALIAVGGYGRREMFPLSDLDFLILVEQTPSPEIEEKITQFIQFLWDCGFEVGNSVRTLEQCESEGKQDITIATNLLEARFLAGNRPHFDALNELVKRADFWSKEDFFNAKVQEQIERYQRYHNTAYNLEPDIKYSPGGLRDLHLLYWVALRHSGALTLEAILQSGFIYPQEYQQLQESRAFLFKVRFALHLILKRYDNRLLFDRQIKVSELLGFRGEGNPAVEKMMKCFFQALHRISLISNLLIQHYRENVLPSNQDTVIDQLDDDFQLINQCLCLRNSFVFQEKPARILDLFFYLTQYEHANIHSDTLRQLQISLDQLSQKLCEIPAAREKFLRLFNQPNAIKRAFMPMHQYGVLTAYLPQWQAIEGLMQFDLFHIYTVDEHTLRVMLKLESFLSQESAQEHPIAHRIFSQLSDRTLLYIAALFHDIAKGRGGDHAELGAVDIADFAQLHGLDRREIDTLAWLVKSHLLMSITAQRRDIHDPEVVMNFAEAVQNQVRLDYLTCLTVADICATNGNLWNSWKRSLFASLYEFTGRQFSQGMKELLDYSEKSAENRKLAQQILMRDYSDITPISIEQLWARCPEDYFVRNTPKQIAWHTSLLVDFVEALLVKISNRFSLGGTEVFIYCQDQPHLFNKVVSTIGAKKFSIHDAQIITTQDGYVFDSFIITELNGELVEFDRRRELEQALTLALQSEKLPALSIVPNRQLQHFTVQTDVRFLQENKKEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQREILRNVLYRNIG
>NZ_CP009610.1|WP_005649958.1|1129956_1130763_+|type-I-methionyl-aminopeptidase
MAIPIRTEKEIVKLREACKLASDVLVMIEPYVKAGVTTGELDRICHEYMVNEQKVIPACLNYHGFPKATCISINEVVCHGIPSDDKVLKNGDIVNIDVTVIKDGYFGDNSKMYIVGGETNIRSKKLVEAAQEALYVGIRTVKPDIRLNEIGKAVQKYTESQTFSVVREYCGHGVGTEFHCEPQVLHYYADDGGVILKPGMVFTIEPMINAGKKEVRVMGDGWTVKTKDRSHSAQYEHQLVVTETGCEVMTIRDEEIAEGRISRIMVNV
>NZ_CP009610.1|WP_005670302.1|1129476_1129821_-|iron-sulfur-cluster-insertion-protein-ErpA
MIDDMAVPLTFTDAAANKVKSLISEEENTNLKLRVYITGGGCSGFQYGFTFDEKVNDGDLTIEKSGVQLVIDPMSLQYLIGGTVDYTEGLEGSRFTVNNPNATSTCGCGSSFSI
>NZ_CP009610.1|WP_011272764.1|1129121_1129475_-|YacL-family-protein
MDFQFTHYQGNVSVKCSMEHIALANWFNTEVRSNSDKILTALSTAKSLIENQEKVLVGAEYTLFLNADEVMVRANNLAIESDEILEQDFHYYDEESLAFCGTQDFIHFLQSYVDFIA
>NZ_CP009610.1|WP_038440997.1|1126769_1129115_-|penicillin-binding-protein-1B
MTSQHSAKKSSKNTPKNNRTFKGFLLKFSFTALVLTIFYGGYLDWQIRSKMDGQIWHLPAEVYSRLESVKIADNLAFDEVIQILLDNEYRQTTMVAAPGDFKLEDDSIVILRRAFPFPDKAEPQRVLRLRFSHNKLSRIEDLVTVKTVDEFRLAPKLIAMLQSDNEDRLAIPLQNYPRLLIDTLILTEDRRFYEHNGINPVGILRALIANIRAGQTVQGGSTLTQQLVKNLFLSRERTITRKANEALMSLVLDWRYDKNRILETYLNEIYLGQNGDTQIHGFELASQFYFGRSIREISLDQIALLVGMVKGPSLYNPWRNPQNALERRNIVLSLMLEHKMIGDELYQLLSQRPLGVQKKGQISRKYPAFIQTLQADLRRELGEHKISSLLGARIFSTMDLKQQAQAENAVVNTVSQLQLKMKNPHLEGAMIITDYRTGEIRAVVGGLQTQYAGFNRALMAKRQIGSLVKPSIYLTALSNPEQFRLNTPINNQPITINVKGSPPWQPRNYDKKYSDSVMLMDALARSLNIPTVNIGMKVGLSKVIDTQKAMGWDNVEIPKVPAMLLGSYSISPYDVTKLYQTLANQGGRIALTTVDSIADRQGNLIFQHDKSAKQVVPQEAAFQTLFAMQQTVERGTARSLQKDYADLHLAGKTGTTNESRDTWFVGIDGKNISTVWLGRDDNGETKLTGASGALQIYKDYLNRTNIEKLAITPPTTVKWVGINQYGDWDCESYRTIPVWLNNGQNFCGETSSPSLTPTTETETPPQESLWDVLDNPNPPAQ
>NZ_CP009610.1|WP_005661057.1|1125724_1126597_-|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MTQQLPILSLKKIYSGKVRDLYEIDDKRMLMVASDRLSAFDVILDDPIPRKGEILTQISNFWFNKLAHIMPNHFTGDSVYDVLPKEEADLIRDRTVVCKRLNPIKIESIVRGYLTGSGLKDYKQTGTICGLKLPEGLVEASKLPEAIFTPSSKEEVGNHDINISYAECEKLIGADLAAQVKEKAIALYTVAAEYALTKGIIICDTKFEFGLDENGTLTLMDEVLTPDSSRFWSVDTYQAGTNPPSFDKQFVRDWLENSGWNKQAPAPKVPENIIQKTVDKYQEALDLLTK
>NZ_CP009610.1|WP_005688053.1|1124234_1125569_-|argininosuccinate-synthase
MSNTILQNLPKGQKVGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEDDYNAIPKKAMAYGAENARLIDCRSQLAHEGIAAIQCGAFHISTGGIPYFNTTPLGRAVTGTMLVAAMKEDDVNIWGDGSTFKGNDIERFYRYGLLTNPNLKIYKPWLDVQFIEELGGRLEMSQFLIENGFDYKMSVEKAYSTDSNMLGATHEAKDLEQLSTGMKIVKPIMGVAFWDEKVEIKPETVTVTFEDGVPVALNGKHFDNAVDLILEANRIGGRHGLGMSDQIENRIIEAKSRGIYEAPGMALLHIAYERLVTGIHNEDTIEQYRINGIRLGRLLYQGRWFDPQALMLRETAQRWVAKAITGTVTLELRRGNDFTILNTESPNLTYEAERLSMEKVEDAPFDPVDRIGQLTMRNLDVSDTRGKLGIYAQTGLLSAIKDSVLPQLGKK
>NZ_CP009610.1|WP_005688055.1|1122970_1124164_+|divalent-metal-cation-transporter
MASITHRRNAVLGAAFLMATSAIGPGFLTQTATFTNTLLASFGFVILLSILLDIGAQLNIWRIVIVSGKRAQDISNAVFPKAGYFLAALIVMGGLAFNIGNVGGAGLGLNSIFGIAPEMGAVISGIIAILIFLRKEAGLLMDRFAQLMGFIMVALTFYVMFKTEPPVAEAAYHSFIPEKIDPIAIVTLVGGTVGGYITFAGAHRLLDAGIQGEKAMAEVSRSSVSAILIASTMRVVLFLAVLGVVSKGVSLNPKNPAETPFEYVAGNFGQVLFGVVIWAASVTSVIGAAYTSVSFLTTLCPTIERNRNRWIIAFIVISTVVLVTVGKPAAVLVFVGTLNGLILPIALALILLAAYRSDIVGTYKHPVFLAFSGWFVVIIMAILSGKTIISYISSFFS
>NZ_CP009610.1|WP_038440993.1|1122189_1122927_+|5-oxoprolinase-subunit-PxpA
MKKIDLNADIAEGFPFDESLLQLLSSANIACGLHAGGAKEMQSAVKFAKENKVRIGAHPSFPDRENFGRTAMALSSQELIAHLRYQLGALKAICDGEGAVISYVKPHGALYNQAAKDEKIARVIAQTVYQFDPNSKLMGLAGSLMLRIAEEEGLQTISEVFADRHYMPDGSLVPRSQPNAMVKSDKEAIQQVLQMVTKGQVNAIDGSLVPVKAESICLHGDNQHSLQFAKRIVEELEKNHIKITA
>NZ_CP009610.1|WP_009500975.1|1134989_1135538_-|oligoribonuclease
MPFDKQNLIWIDLEMTGLDPEKERIIEIATIVTDKNLNILAEGPVLAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPICGNSIAQDKRFLVKYMPDLADYFHYRHLDVSTLKELAARWKPEILEGFKKENTHLALDDIRESIKELAYYREHFMKLD
>NZ_CP009610.1|WP_011272762.1|1135608_1136649_+|small-ribosomal-subunit-biogenesis-GTPase-RsgA
MAKRKLTQNQTRRIQSNNAKTLHRHKKKDIEWSDEMLGESQEGVVVTRYSIHADVENEQGEIYRCNLRRTLSSLVVGDKVVWRKGNEQLQGVSGVIEAIHPRENEISRPDYYDGLKPIAANIDRIIIVSAVLPTLSLNIIDRYLVVCEIAGITPLIVLNKVDLLAQEQRQEIEDQLKIYQDIGYEILMISAKSGENMEKLTALLAQGTAIFVGQSGVGKSSLINHILPSVNAQVGDVSETSGLGQHTTTSSRLYHLPQGGNLIDSPGIREFGLWHLDAEQITKGYREFQYVLGTCKFRDCKHLSDPGCALREAVEQGKISPVRYDSYHRLIESLSETKSQRHFSLV
>NZ_CP009610.1|WP_011272761.1|1136807_1137065_+|phosphocarrier-protein-Hpr
MYSKDVEIIAPNGLHTRPAAQFVKEAKAFSSEITVTSGGKSASAKSLFKLQTLVLTQGTILTISADGEDEQQAVEHLVALIPTLE
>NZ_CP009610.1|WP_011272760.1|1137144_1138872_+|phosphoenolpyruvate-protein-phosphotransferase-PtsI
MISGILASPGIAFGKALVLKEEKIVLDTQKITDDQIDEEVARFYEGRAAAVEQLNSIRERALISLGEEKAAIFEGHLMILEDEELEEEILDYLRSNKVNAGVAASKILDQQVTMLSEIDDEYLKERAGDIRDIANRLVKNILGMHIVDLGDIQEESILVAYDLTPSETAQLNLEKVLGVVTDIGGRTSHTSIMARSLELPAIVGTNKVTKLVNTGDYLILDAINNQVYINPTASQIDELKALEAKISEEKAELAKLKDLPAITLDGHKVDIVANIGTIRDCDGAERNGAEGIGLYRTEFLFMDREQLPTEEEQFIAYKQVVEAMNGRLTVLRTMDIGGDKELSYLDLPKEMNPFLGWRAIRIALDRREILNAQLRAVLRASAFGKLAVMFPMIISVEEIRELKAVIETLKAELREEGRVFDNNIQVGVMVETPSAAVNAKFLAKEVDFFSIGTNDLTQYTLAVDRGNEFISHLYNPMHPSVLGLIKQVIDASHTEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISVPRIKKLIRNVNFQDAKALADAALQKPTAAEIDQLIEEFLLENSLN
>NZ_CP009610.1|WP_011272759.1|1138931_1139432_+|PTS-glucose-transporter-subunit-IIA
MGLFDKLFGSKENKSVEVEIYAPISGEIVNIEDVPDVVFSEKIVGDGIAVRPIGNKIVAPVDGVIGKIFETNHAFSMESKEGVELFVHFGIDTVELKGEGFTRIAQEGQSIKRGDTVIEFDLPLLESKAKSVLTPIVISNMDEISCIVKKSGEVVAGESVVLALKK
>NZ_CP009610.1|WP_005688032.1|1140936_1141302_+|YgiW/YdeI-family-stress-tolerance-OB-fold-protein
MKKFALATIFALATTSAFAGFNGNNSQGGFQQTAPAAISVKQALSAADNSMITLVGNITQQIDDDEFWFTDGTGQIKIEIKKRVWNGLNVDSKDKVKIYGKLDNEAFEKAELDVLRVEKAE
>NZ_CP009610.1|WP_038440999.1|1141365_1142031_+|response-regulator
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSAPYDAVVLDLTLPKLDGLDVLQQWRSNHQDVPVLILTARDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGHHHSVIEQSGVKLDQNQRSVWLNNQPISLTSREYKLLELLMLNKDRVLSRTSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK
>NZ_CP009610.1|WP_038441000.1|1142027_1143383_+|two-component-system-sensor-histidine-kinase-QseC
MKNRSLTLRLISVLSLTALLVWLSSTLVAWWQVRHDVNKVFDAQQVLFAERLANSDLSAILLESSTKLDKNSQSALKKSYDDDALAFAIFSQTGKLLFSDGRNGKRFIFNNKMGFHNANIYDDDDKWRIFWRMAANGELFIAVGQELDYREDLIEEMIFGQMWIWFASLPILIIVLGWLIHKELRPIKRLSQEVQRRKSGDVSLLNTEGLPVEILPLVKNLNQFFDRTSAMLQRERRFTSDAAHELRSPLAALRIQTEVAQLANDDASLREQALTHLTQGIDRASQLIEQLLTLSRLDNLQALETLQPLDWEAIVQSLISERYFVAEKRKITLVFEKESEPKQKQGQSILVSLMLRNLLDNAIKYCPEETTVSVKIASSQIIIEDNGGGVEPEDLKKLGQRFYRPAGQNEKGSGLGLSIVMRIAELHEFKVRLENVIKESQRIGLKAIIYL
>NZ_CP009610.1|WP_038441002.1|1143648_1145676_+|BCCT-family-transporter
MSLSQFMTKRTSFNPLVIGVTLFFVLLLMAMIFIAPEQTQALLNQAKSGIFANFSWFYVLTFSVFLGFLLILSVSSLGNIKLGQDEEEPEFSFLSWLAMLFAAGMGVGLMFFGVAEPLTHYLSDITAGSAEHKQQEALLHTLFHWGIHAWAVYGTIALALAYFGFRYKLPLALRSCFYPLLKDRINGKIGDAIDVMALLATLFGIITTLGFGSSQLGAGLEQIGWISQNSFALQVGVIVVVMCLAVFSAISGIGKGVKILSEINLTLAFCLLLFVLISGPTLYLLSAFSDNIGNYFSNLVQLSFKTYAYEQEHTSWFSGWTVLYWAWWCSWAPFVGLFIARISKGRTIREFIFGVLVIPSLFGILWFTVFGNTAVWLNDGIAAGGLGEFISSPEILLFKFLNYLPLPTITGFVSLLVISLFFITSADSGIYVLNNIASRDKSLASPAWQAIMWGTLMSVVAIVLMQSGGLANLQTMTLIVALPFALLMLVMCFSLWKGLIADKKYFSTKVNPTSIFWSGDKWKSHLEQMMNQTQEKDILRFLKNTALPAMRELRQELTGKYNLSVEINTLFEQEEPALELVIHKESMRDFMYGIKSVGREVSEQLINDENLPHIQHSVTYEPYTYFFDGRVGYDVQYMDQDELIADMLKQYERYLSLLDDVGQELMAHEQTELAE
>NZ_CP009610.1|WP_005658248.1|1145711_1147187_-|leucyl-aminopeptidase
MKYQAKNTALSQATDCIVLGIYENNKFSKSFNEIDQLTQGYLNDLVKSGELTGKLAQTILLRDLQGLSAKRLLIVGCGKKGELTERQYKQIIQAVLKTLKETNTREVISYLTEIELKDRDLYWNIRFAIETIEHTNYQFDHFKSQKAETSVLESFIFNTDCNQAQQAISHANAISSGIKAARDIANMPPNICNPAYLAEQAKNLAENSTALSLKVVDEEEMAKLGMNAYLAVSKGSENRAYMSVLTFNNAPDKNAKPIVLVGKGLTFDAGGISLKPAADMDEMKYDMCGAASVFGTMKAIAQLNLPLNVIGVLAGCENLPDGNAYRPGDILTTMNGLTVEVLNTDAEGRLVLCDALTYVERFEPELVIDVATLTGACVVALGQHNSGLVSTDNNLANALLQAATETTDKAWRLPLSEEYQEQLKSPFADLANIGGRWGGAITAGAFLSNFTKKYRWAHLDIAGTAWLQGANKGATGRPVSLLTQFLINQVK

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Crispr_ID: NZ_CP009610_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009610_3

1164558-1164645

Orphan

Consensus_repeat	Method
ACCTTCCCCCGCAAGCAAGGGAAGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009610_3

>merge|NZ_CP009610|3|1164558-1164645|CRISPRCasFinder
ACCTTCCCCCGCAAGCAAGGGAAGGCAAGATTTTCTTTGAGCCTCTTTTTGTCACTTTGTGATACCTTCCCCCGCAAGCAGGGGAAGG

>NZ_CP009610|3|3|1164558-1164645|CRISPRCasFinder
ACCTTCCCCCGCAAGCAAGGGAAGG	CAAGATTTTCTTTGAGCCTCTTTTTGTCACTTTGTGAT
ACCTTCCCCCGCAAGCAGGGGAAGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009610.1\|WP_005650033.1\|1169197_1169779_-\|electron-transport-complex-subunit-RsxB	unknown	unknown	gnl\|CDD\|235347
NZ_CP009610.1\|WP_005689729.1\|1161329_1162385_+\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	unknown	unknown	gnl\|CDD\|182993
NZ_CP009610.1\|WP_005654380.1\|1162408_1163782_-\|sodium-dependent-transporter	unknown	unknown	gnl\|CDD\|271367
NZ_CP009610.1\|WP_038441014.1\|1172720_1174877_+\|TIGR01666-family-membrane-protein	unknown	unknown	gnl\|CDD\|130727
NZ_CP009610.1\|WP_005658217.1\|1158810_1159578_-\|TOBE-domain-containing-protein	unknown	unknown	gnl\|CDD\|182640
NZ_CP009610.1\|WP_005658221.1\|1157011_1157896_+\|lipooligosaccharide-biosynthesis-N-acetyl-glucosamine-transferase-LsgE	unknown	unknown	gnl\|CDD\|366154
NZ_CP009610.1\|WP_038441006.1\|1165992_1167069_-\|electron-transport-complex-subunit-RsxD	unknown	unknown	gnl\|CDD\|234844
NZ_CP009610.1\|WP_038441012.1\|1171987_1172653_+\|DUF2057-domain-containing-protein	unknown	unknown	gnl\|CDD\|234990
NZ_CP009610.1\|WP_038441010.1\|1170726_1171788_-\|protease-SohB	unknown	unknown	gnl\|CDD\|236978
NZ_CP009610.1\|WP_005658215.1\|1160614_1161343_+\|molybdate-ABC-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|181841
NZ_CP009610.1\|WP_038441008.1\|1167073_1169197_-\|electron-transport-complex-subunit-RsxC	unknown	unknown	gnl\|CDD\|235334
NZ_CP009610.1\|WP_005689725.1\|1164660_1165368_-\|electron-transport-complex-subunit-E	unknown	unknown	gnl\|CDD\|237091
NZ_CP009610.1\|WP_005689727.1\|1163840_1164476_-\|endonuclease-III	unknown	unknown	gnl\|CDD\|182661
NZ_CP009610.1\|WP_005689723.1\|1165369_1165993_-\|electron-transport-complex-subunit-RsxG	unknown	unknown	gnl\|CDD\|179350
NZ_CP009610.1\|WP_005654371.1\|1159715_1160480_+\|molybdate-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|182641
NZ_CP009610.1\|WP_005694403.1\|1169866_1170445_-\|electron-transport-complex-subunit-RsxA	unknown	unknown	gnl\|CDD\|235352
NZ_CP009610.1\|WP_005658225.1\|1155153_1156215_+\|lipooligosaccharide-biosynthesis-family-4-glycosyltransferase-LsgC	unknown	unknown	gnl\|CDD\|340847
NZ_CP009610.1\|WP_005658223.1\|1156226_1157000_+\|lipooligosaccharide-biosynthesis-galactosyltransferase-LsgD	unknown	unknown	gnl\|CDD\|225843
NZ_CP009610.1\|WP_080291962.1\|1174953_1176906_-\|adhesin	unknown	unknown	gnl\|CDD\|375681
NZ_CP009610.1\|WP_005658219.1\|1157897_1158701_+\|lipooligosaccharide-biosynthesis-galactosyltransferase-LsgF	unknown	unknown	gnl\|CDD\|133038

Protein	Function_ID	Function_description	E-value
NZ_CP009610.1\|WP_005650033.1\|1169197_1169779_-\|electron-transport-complex-subunit-RsxB	gnl\|CDD\|235347	PRK05113, PRK05113, electron transport complex protein RnfB; Provisional.	1.12731e-113
NZ_CP009610.1\|WP_005689729.1\|1161329_1162385_+\|molybdenum-ABC-transporter-ATP-binding-protein-ModC	gnl\|CDD\|182993	PRK11144, modC, molybdenum ABC transporter ATP-binding protein ModC.	0
NZ_CP009610.1\|WP_005654380.1\|1162408_1163782_-\|sodium-dependent-transporter	gnl\|CDD\|271367	cd10336, SLC6sbd_Tyt1-Like, solute carrier 6 subfamily, Fusobacterium nucleatum Tyt1-like; solute-binding domain. SLC6 proteins (also called the sodium- and chloride-dependent neurotransmitter transporter family or Na+/Cl--dependent transporter family) include neurotransmitter transporters (NTTs): these are sodium- and chloride-dependent plasma membrane transporters for the monoamine neurotransmitters serotonin (5-hydroxytryptamine), dopamine, and norepinephrine, and the amino acid neurotransmitters GABA and glycine. These NTTs are widely expressed in the mammalian brain, involved in regulating neurotransmitter signaling and homeostasis, and the target of a range of therapeutic drugs for the treatment of psychiatric diseases. Bacterial members of the SLC6 family include the LeuT amino acid transporter. An arrangement of 12 transmembrane (TM) helices appears to be as a common topological motif for eukaryotic and some prokaryotic and archaeal NTTs. However, this subfamily which contains the majority of bacterial members and some archaeal members, appears to contain only 11 TMs; for example the functional Fusobacterium nucleatum tyrosine transporter Tyt1.	1.13115e-164
NZ_CP009610.1\|WP_038441014.1\|1172720_1174877_+\|TIGR01666-family-membrane-protein	gnl\|CDD\|130727	TIGR01666, Uncharacterized_protein_HI_1680, TIGR01666 family membrane protein. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are >700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS. [Cell envelope, Other].	0
NZ_CP009610.1\|WP_005658217.1\|1158810_1159578_-\|TOBE-domain-containing-protein	gnl\|CDD\|182640	PRK10676, PRK10676, DNA-binding transcriptional regulator ModE; Provisional.	2.3464e-84
NZ_CP009610.1\|WP_005658221.1\|1157011_1157896_+\|lipooligosaccharide-biosynthesis-N-acetyl-glucosamine-transferase-LsgE	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	7.68429e-32
NZ_CP009610.1\|WP_038441006.1\|1165992_1167069_-\|electron-transport-complex-subunit-RsxD	gnl\|CDD\|234844	PRK00816, rnfD, electron transport complex protein RnfD; Reviewed.	0
NZ_CP009610.1\|WP_038441012.1\|1171987_1172653_+\|DUF2057-domain-containing-protein	gnl\|CDD\|234990	PRK01904, PRK01904, DUF2057 domain-containing protein.	1.99448e-117
NZ_CP009610.1\|WP_038441010.1\|1170726_1171788_-\|protease-SohB	gnl\|CDD\|236978	PRK11778, PRK11778, putative inner membrane peptidase; Provisional.	0
NZ_CP009610.1\|WP_005658215.1\|1160614_1161343_+\|molybdate-ABC-transporter-permease-subunit	gnl\|CDD\|181841	PRK09421, modB, molybdate ABC transporter permease subunit.	4.4308e-140
NZ_CP009610.1\|WP_038441008.1\|1167073_1169197_-\|electron-transport-complex-subunit-RsxC	gnl\|CDD\|235334	PRK05035, PRK05035, electron transport complex protein RnfC; Provisional.	0
NZ_CP009610.1\|WP_005689725.1\|1164660_1165368_-\|electron-transport-complex-subunit-E	gnl\|CDD\|237091	PRK12405, PRK12405, electron transport complex RsxE subunit; Provisional.	4.5237e-131
NZ_CP009610.1\|WP_005689727.1\|1163840_1164476_-\|endonuclease-III	gnl\|CDD\|182661	PRK10702, PRK10702, endonuclease III; Provisional.	8.06206e-140
NZ_CP009610.1\|WP_005689723.1\|1165369_1165993_-\|electron-transport-complex-subunit-RsxG	gnl\|CDD\|179350	PRK01908, PRK01908, electron transport complex protein RnfG; Validated.	1.08851e-127
NZ_CP009610.1\|WP_005654371.1\|1159715_1160480_+\|molybdate-ABC-transporter-substrate-binding-protein	gnl\|CDD\|182641	PRK10677, modA, molybdate transporter periplasmic protein; Provisional.	3.40456e-98
NZ_CP009610.1\|WP_005694403.1\|1169866_1170445_-\|electron-transport-complex-subunit-RsxA	gnl\|CDD\|235352	PRK05151, PRK05151, electron transport complex protein RsxA; Provisional.	3.61742e-111
NZ_CP009610.1\|WP_005658225.1\|1155153_1156215_+\|lipooligosaccharide-biosynthesis-family-4-glycosyltransferase-LsgC	gnl\|CDD\|340847	cd03820, GT4_AmsD-like, amylovoran biosynthesis glycosyltransferase AmsD and similar proteins. This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.	6.66878e-136
NZ_CP009610.1\|WP_005658223.1\|1156226_1157000_+\|lipooligosaccharide-biosynthesis-galactosyltransferase-LsgD	gnl\|CDD\|225843	COG3306, COG3306, Glycosyltransferase involved in LPS biosynthesis [Cell envelope biogenesis, outer membrane].	6.22864e-55
NZ_CP009610.1\|WP_080291962.1\|1174953_1176906_-\|adhesin	gnl\|CDD\|375681	pfam18254, HMw1_D2, HMW1 domain 2. This domain is found in Actinobacillus pleuropneumoniae HMW1C (ApHMW1C). HMW1 adhesin is an N-linked glycoprotein that mediates adherence to respiratory epithelium through N-glycosylation of protein acceptor sites and O-glycosylation of sugar acceptor sites. This domain forms an all alpha domain (AAD) when combined with the N-terminal domain. The AAD interacts extensively with the C-terminal GT-B fold in order to create a unique groove with the potential to accommodate the acceptor protein.	1.91941e-48
NZ_CP009610.1\|WP_005658219.1\|1157897_1158701_+\|lipooligosaccharide-biosynthesis-galactosyltransferase-LsgF	gnl\|CDD\|133038	cd04195, GT2_AmsE_like, GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis. AmsE is a glycosyltransferase involved in exopolysaccharide amylovora biosynthesis in Erwinia amylovora. Amylovara is one of the three exopolysaccharide produced by E. amylovora. Amylovara-deficient mutants are non-pathogenic. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.	6.66963e-120

>NZ_CP009610.1|WP_005689727.1|1163840_1164476_-|endonuclease-III
MNKTKRIEILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKATEKLFPVANTPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKHNGEVPENREALEALAGVGRKTANVVLNTAFGHPTIAVDTHIFRVCNRTNFAAGKDVVKVEEKLLKVVPDEFKVDVHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVEF
>NZ_CP009610.1|WP_005654380.1|1162408_1163782_-|sodium-dependent-transporter
MTTNNKQRQTWSSRLTYVMTVAGATVGFGATWRFPYLVGENGGGAYVLLFCIAMIVIGIPMILVENVIGRRLRVNSIDAFGDKILDKGKGISKYWKILGYMGLLGAFGIMAYYMVLGGWVISYIISLISGTLDISTPITKDIAKNFYDLHIGNSPYEIIFYTLLFVIVNYIILAKGIIGGIERSVKYLMPLLFIFLIGMVIRNVTLPGAMEGITFYLKPDFSKITPQLFIFVLGQVFFALSLGFGVLITLSSYLNKEENLIHTAVITGFTNTIIAVLAGFMIFPSLFTFGIEPNAGPTLVFQSLPIVFSHLWAGKFFAIIFFGLLLIAALTTSITIYEVIITALQEKLRMRRGKAIVLTLSGIFLLGNIPAILGDNLWKNVTIFGKSIFDFYDYASGNILFMLTALGCAIFVGFVLKDEAKKELSSTKYSTFIKIWFNYVKFVVPLIILVIFISNLF
>NZ_CP009610.1|WP_005689729.1|1161329_1162385_+|molybdenum-ABC-transporter-ATP-binding-protein-ModC
MLQINVKKQLGKLALQANIQVPDQGVTAIFGLSGSGKTSLINLVSGLIQPDEGFIRLNDRTLVDMESQESLPTHLRKIGYVFQDARLFPHYTVKGNLRYGMKHVSQDDFNYIVDLLGITHLLKRYPLTLSGGEKQRVAIGRALLTDPDILLMDEPLSALDVPRKRELMQYLERLSKEINIPILYVTHSLDELLRLADRVVLMENGIVQAYDSVEKIWNSPIFAPWKGENEQSSVLALPVHLHNPPYKMTALSLGEQALWIHQVPANVGERVLVCIYSSDVSIILQKPEQTSIRNILRGKITQIEIQDSRVDLAVLVEGNKIWASISKWAQNELRFAVGQDVYVQIKAVSVM
>NZ_CP009610.1|WP_005658215.1|1160614_1161343_+|molybdate-ABC-transporter-permease-subunit
MLTQFFSFFNLTPMEISAINLSLSVAVSSMLWSLPLAIFVAWLLARKNFYGKSLITGVIHLPLVLPPVVIGYLLLVAMGRNGFIGKYLYQWFGLSFGFSWKGAVLSSAVVAFPLVVRAIRLSLENIDIKLEQAAQTLGASAWRVFFTITLPLSLPGVLAGLVLGFARSLGEFGATITFVSNIAGETQTIPLAMYSFIQTPAAEEQTARLCLFAIILSLISLLLSEWLSKRMQKKLGQGNVAN
>NZ_CP009610.1|WP_005654371.1|1159715_1160480_+|molybdate-ABC-transporter-substrate-binding-protein
MKKLTKISTALLIAGLGFSFAASAKVTVFAAASMTDALQQVAKDYAKQNPKNEVVFSFASSSTLAKQVEEGAPADIFVSASNKWMKYLSEKDLTVKETEKVLVGNDLVLIAPAKSAVNSVDIAKGEWINALKDSYLSVGDPAHVPAGQYAAEALTKLNLWDKVQDRLARAKDVRGALALVERAEAPYGIVYSTDAKVSQQVKTVAVFPADSHKPVVYPVSIVKGHDNADSRDFLKYLESDAAKKVLVGYGFSAK
>NZ_CP009610.1|WP_005658217.1|1158810_1159578_-|TOBE-domain-containing-protein
MKNTEILLTIKLQQALFIDPKRVRLLKEIQQCGSINQAAKNAKVSYKSAWDHLEAMNKISPRPLLERNTGGKNGGGTVLTTYAERLLQLYDLLERTQEHAFHILQDESVPLDSLLTATARFSLQSSARNQFFGRVAQQRIIDSRCVVDVNVQGLPTPLQVSITTKSSARLKLITEKEVMLMFKAPWVKISEQPLVNQPNQFSVNIKSLNEEEAILQFAESNIEFCATVHQPNQWQIGQQVWIHIDQEQIILATLG
>NZ_CP009610.1|WP_005658219.1|1157897_1158701_+|lipooligosaccharide-biosynthesis-galactosyltransferase-LsgF
MKFSVLMSLYIKENPQFLRECFESLVAQTRQADEIVLVFDGAVTPELESVVTEFETKLPLKLVKLPQNRGLGKALNEGLLHCTYDWVFRMDTDDICVPDRFEKQVAFIEQHPESIIFGGQIAEFGKNVNDIVAYRNVPTSAQEIIKFTQKRCPFNHMTVAYQKSAVINCGGYEDLQEDYYLWIKLVAQGLYMANLPDILVYARVGNGMVSRRRGVNQAKAEWRLFKLKYRLGIQGLLSGLFTFALRFGSRLLPTSLLKKLYQTFLRK
>NZ_CP009610.1|WP_005658221.1|1157011_1157896_+|lipooligosaccharide-biosynthesis-N-acetyl-glucosamine-transferase-LsgE
MLSIIVPSYNRKAEVPALLESLTQQTSSNFEVIIVDDYSKERVVVEQRYSFPVTVIRNETNQGAAESRNIGARASKGDWLLFLDDDDRFMPEKSEKILQVIEQNPDINFIYHPAKCEMVNEGFSYVTQPIEPQEISTERILLANKIGGMPMVAIKKEMFLKIGGLSTALRSLEDYDFLLKLLQEPSFTPYKINEPLTYCTFHTKRSSVSTDTTNTQKAIDYIREHYVKTVEQARNFDINASYILAYPHIMNLSRKAAKYYFDIFKKTKSIKQFIITLVILISPKLAINLKRLGK
>NZ_CP009610.1|WP_005658223.1|1156226_1157000_+|lipooligosaccharide-biosynthesis-galactosyltransferase-LsgD
MLKKYLISLDKDIQRRKLFFSQKNTEDFQIFSAINTMQKDWDELASIFNIEQFKAHYFRNVTKGEIGCTLSHLSVYQKIIEDNDIAEDSYALVCEDDALFHSDFQQNLTALLSEKLEAEIILLGQSKINSFNDTDLEINYPTTFSFLCKKTGNVNYAFPYKSYFAGTVGYLIKKSAARRFIQQISQNKPFWLADDFLLFEQDFNIRNKVVRPLMVIENPVLISNLESVRGSLSNNLLKKLMKYPLKKIFAIKKNLAN
>NZ_CP009610.1|WP_005658225.1|1155153_1156215_+|lipooligosaccharide-biosynthesis-family-4-glycosyltransferase-LsgC
MKKIGFFIMNIESAGGTERVSINVANALAKQGYDVSFISIGGNKPFFQVDEKINIYAMNKLPYSLKKDYFSITKKLRELVKELQLDTLIVVDGAIMLFSALALVNLNIKHILWEHYSFNFTGNRLVRTLGKYLAVTTCDKIVTLTEAEKTLWQEKFKTNNIITIANPNTLLPKNKLAKWENKTILSVGHLFSYKGFDYLLKVWQVLAKKYPDWNLKIVGSGEEEENLKNLAKALDIEDSVNFTPRTNDVSFYYESSSIYCLPSQTEGLPLVVIEAMAFGLPIVAFNCSPGVKQLVEHKENGFLCEKNNIEEMVKGLDLLINNPELYQQMSDKSRLMSEDYGIEKIIEEWKGIL
>NZ_CP009610.1|WP_005689725.1|1164660_1165368_-|electron-transport-complex-subunit-E
MTDLTEKNTALEEEKIESAVENQQKSIWKEIFAQGIWKNNPAVVQLLGLCPLLAVSSTATNALGLSLATMLVLTCTNTVISLFRQYIPKEIRIPIYVMIIATTVTAVQLLMNAYTYTLYQSLGIFIPLIVTNCIIIGRAEAFASKNSLLHSIWDGFSMGLGMALSLTILGALREIIGQGTIFEGIENLFGEQAKFLTHHIYHTDSSFLLFILPPGAFIGLGLLLAIKNRIDNVKK
>NZ_CP009610.1|WP_005689723.1|1165369_1165993_-|electron-transport-complex-subunit-RsxG
MGTVKITSRYGILLGFIALLCTIISAGIYFLTKDKIDAVIAAQQRELLLQVIPQDYFNNNLLESAVIPQDKNFVGIQKIYFAKKDGNISAYAYETTAPDGYSGDIRLLVGLDPKGEVLGVRVIEHHETPGLGDKIERRISNWILGFTNQSINEHNLSEWAVKKDGGKFDQFSGATITPRAVVNQTKRSALIMLNNQALLQQLSTQVK
>NZ_CP009610.1|WP_038441006.1|1165992_1167069_-|electron-transport-complex-subunit-RsxD
MFKMVSSPHTHSGKLTARIMLWVILAMMPAFFTQIYYFGFGVVLQSALAIGTAIIAEFIAIKLRGKKPLNYLSDFSVALTALILAMAIPPYAPYWVIIIGTLCAVLLGKQVYGGLGQNPFNPAMIGYVILLISFPLQMTTWMPPINLLQEPPTFSDTFSLIFSGLTTDGFTLSQLTHNIDGITQATPLDSAKIFYKSHNQLSDFYELIKLPIFMGNGTDFAQGWWQINVAFLAGGIFLILKRVIHWQIPVTMLVTFFCLATATAFTGFTHLSAISQLVSGAMMFGAFFIATDPVTASITPRGKIIFGALVGLFVYLIRYHGNYPDGVAFAILLSNICVPLIDHYTRPRVSGYPTKGRK
>NZ_CP009610.1|WP_038441008.1|1167073_1169197_-|electron-transport-complex-subunit-RsxC
MADVLSRFNSGKLWDFKGGIHPPEMKSQSNSQPLRYLPLGTDFYIPLKQHLGTTGNLLIKEGDYVLKGQALTKGDGLRMLPVHAPTSGTIKSIKPYVATHPSGLDEPTIHLQADGLDQWIERNPIDDFSTLSSEQLIHKIYQAGIAGLGGAVFPTAAKIQSAEQKVKLLIINGAECEPYITCDDRLMRERADEIIKGIRILRYILHPEKVVIAIEDNKPEAISAIRNALQGANDISVRVIPTKYPSGATKQLIYLLTGIEVPSGERSSSIGVLMQNVGTMFAIKRAVINDEPLIERVVTLTGNKIAEKGNYWVRLGTPISQILSDAGYQFDKHFPIFAGGPMMGLELPNLNAPVTKLVNCLLAPDYLEYAEPEAEQACIRCSSCSDACPVNLMPQQLYWFARSEDHKKSEEYALKDCIECGICAYVCPSHIPLIQYFRQEKAKIWQIKEKQKKSDEAKIRFEAKQARMEREEQERKARSQRAAQARREELAQTKGEDPVKAALERLKAKKANETESTQIKTLTSEKGEVLPDNTDLMAQRKARRLARQQAASQVENQEQQTQPTDAKKAAVAAALARAKAKKLAQANSTSEAISNAQTVENEVEKTKSAVEKTQENSTALDPKKAAVAAAIARAKAKKLAQANSTSEAISNAQTAENEVEKTKSAVEKTQENSTALDPKKAAVAAAIARAKAKKLAKTQATLENNQE
>NZ_CP009610.1|WP_005650033.1|1169197_1169779_-|electron-transport-complex-subunit-RsxB
MTFLFIVITLLALIFGAILGFASIKLKVEADPVVEKIDAILPQSQCGQCGYPGCKPYAEAICNGDEITKCIPGGQTTIVKIAEILGVDVPTMEGIEEPIEKVAFIDENMCIGCTKCIQACPVDAIIGTNKAMHTIIPDLCTGCELCVAPCPTDCILMIPVKKNIDNWDWKFDAKLVIPVMNVDGSEKKLVVGE
>NZ_CP009610.1|WP_005694403.1|1169866_1170445_-|electron-transport-complex-subunit-RsxA
MTHYILLIIGTALINNFVLVKFLGLCPFMGVSKKIETAVGMGLATMFVLTVASLCAYLVDHYILIPLNATFLRTLVFILVIAVVVQFTEMAINKTSPTLYRLLGIFLPLITTNCAVLGVALLNVNLAHNLTESVVYGFGASLGFSLVLVLFAALRERLVAADIPATFRGSSIALITAGLMSLAFMGFTGLVK
>NZ_CP009610.1|WP_038441010.1|1170726_1171788_-|protease-SohB
MLNDILTGYGIFILEILTILLLILAIVGLIISYRQHNKSKVGELEIKDLSEEFNEQVRLLRDFNLSEEEQKQRTKAEKKAEKQNAKKRKEKLKKSETLEDEKKACVYVLDFCGDISASETTALREEISAILNVAKSEDEVLLRLESPGGIVHNYGFAASQLSRLKQKGIKLTVAVDKVAASGGYMMACVADKIVSAPFAVIGSIGVVAQIPNVHRLLKKHDVDVDVMTAGEFKRTVTVLGENTEKGKQKFQQELEETHKLFKQFVSQNRPCLDIDKIATGEHWFGQQAIALQLVDEISTSDDLILEKMKEKQVLNVKYRLKKSLIKKFGRQAEESAINIIHRYSTKQSRDFMY
>NZ_CP009610.1|WP_038441012.1|1171987_1172653_+|DUF2057-domain-containing-protein
MKLRAVVLGLATLCTSTATFAGMVSTSSNLEFLAIDGQKASKSLGKAKTFTVDDTQNHQVVVRLNEIVGSGSNQSLFESNPVIVTFQGNAEDLVISAPVIRNLDSGDKFNQMPNITVKTKSGNAISAKVDVLKQEGLFPSGNVLNDLAEYNASGAAASVSKFAATTVASSVAVVPAGNAKANKGKVVVQGENVAEQQLQYWFQQADKETQTRFLNWAKSHK
>NZ_CP009610.1|WP_038441014.1|1172720_1174877_+|TIGR01666-family-membrane-protein
MNIRLNTKVISTIPVFIAVNIAAVGIWFFDISSQSMPLILGIIAGGLVDLDNRLTGRLKNVFFTLIAFSISSFIVQLHIGKPIQYIVLMTVLTFIFTMIGAVGQRYSTIAFGSLVVALYTTLTYIPEVNVWFINPVMILCGTLLYSVVTLIVYLFFPNRPVQESVAKAFCALGEYLDTKSCFFDPDEVAEIEKKHLNFAMKNANVVTAFNIVRTALFYRIRGQHRHPRTQRMLRYYFAAQDIHERTNSTHFDYQQITEKLKNTDLIFRIQRLLELQAQSCKEITASLRENKPYHFNERVERALLGTLHSFELYRAQHLNDQDELIDIQTLLDNLQSINWQLRQLAQDTTDTEQLAQIHTEQITGLKNISAVIFSHFTFESPLFRHAVRLSIVVFLCCAIVEFFQFNLGYWILLTTVFVCQPNYSATKVRLRQRIIGTILGVVVGSLLPYLNPTLELKLGLVVLTSTLFFFFRSNNYSFSTFFITLQVLLSFDVMGFDTAAALMPRLLDTLLGAAISWFAVSYLWPDWKYLQLDKVSHQALRSDAVYLLHIISQLQFGKSDDLKYRIARRNAHQYAAALSTTLSNMNNEPVKYKTYLQKGFDLLKLNYSLLSYISALGAYRDRMKNLQQTAQFLSGFYPVAKKIIYTLEHIEEIPEAIFNQQQERIETHLKELEKQEMTAEERTVFSLPYQQLNLITQLLPQFYGYFKKEINCQRAGAL
>NZ_CP009610.1|WP_080291962.1|1174953_1176906_-|adhesin
MTKENLQSVPQNTTASLVESNNDQTSPQMLQQSPKPSLLRLEQHIEKKDYEFACRELMVILEKMDANFGGVHDIEFDAPAQLAYLPEKLLIYFATRLANAITTLFSDPELAISEEGALKMISLQRWLTLIFASSPYVNADHILNKYNINPDSEGGFHLATDNSSIAKFCIFYLPESNVNMSLDALWAGNQQLCASLCFALQSSRFIGTASAFHKRAVVLQWFPKKLAEIANLDELPANILHDVYMHCSYDLAKNKHDVKRPLNELVRKHILTQGWQDRYLYTLGKKDGKPVMMVLLEHFNSGHSIYRTHSTSMIAAREKFYLVGLGSESVDEIGREVFDEFFEISSNNIMERLFFIRKQCETFQPAVFYMPSIGMDITTIFVSNTRLAPIQAVALGHPATTHSEFIDYVIVEDDYVGSEDCFSETLLRLPKDALPYVPSALAPQKVDYVLRENPEVVNIGIAATTMKLNPEFLLTLQEIRDKAKVKIHFHFALGQSTGLTHPYVKWFIESYLGDDATAHPHAPYHDYLAILRDCDMLLNPFPFGNTNGIIDMVTLGLIGVCKTGDEVHEHIDEGLFKRLGLPEWLIADTRETYIECALRLAENHQERLELRRYIIENNGLQKLFTGDPRPLGKILLKKTNEWKRKHLSKK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

634131 : 697360

Mannheimia_phage(11.11%)

tail,protease,portal,integrase,tRNA,terminase

attL 638226:638243|attR 663461:663478

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038440634.1\|634131_634842_-\|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	NA	NA	NA	NA
WP_038440637.1\|634854_636777_-	ATP-dependent DNA helicase	A0A127AW80	Bacillus_phage	2.5e-98	33.2
WP_005649192.1\|637103_637514_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA
WP_005649191.1\|637530_638217_+	protein TolQ	NA	NA	NA	NA
638226:638243	attL	NA	NA	NA	NA
WP_005649190.1\|638287_638707_+	colicin uptake protein TolR	NA	NA	NA	NA
WP_038440639.1\|638722_639997_+	cell envelope integrity protein TolA	NA	NA	NA	NA
WP_011272014.1\|640038_641322_+	Tol-Pal system protein TolB	NA	NA	NA	NA
WP_005652235.1\|641345_641807_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA
WP_005641600.1\|642240_643266_-\|integrase	site-specific integrase	K7PKD7	Enterobacteria_phage	7.4e-57	35.4
WP_005651299.1\|643163_643478_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_005668273.1\|643604_643892_-	hypothetical protein	NA	NA	NA	NA
WP_005668271.1\|643895_644165_-	hypothetical protein	NA	NA	NA	NA
WP_005668266.1\|644429_644963_-	hypothetical protein	NA	NA	NA	NA
WP_005651292.1\|645034_645451_-	hypothetical protein	E5EYK4	Acinetobacter_phage	1.1e-08	35.9
WP_038440643.1\|645454_646108_-	hypothetical protein	A0A0M3LNU4	Mannheimia_phage	1.9e-05	35.1
WP_038440645.1\|646158_647322_-	DNA cytosine methyltransferase	A0A2I7RFJ9	Vibrio_phage	7.5e-90	46.4
WP_038440647.1\|647329_647689_-	hypothetical protein	NA	NA	NA	NA
WP_005668254.1\|647685_647931_-	hypothetical protein	NA	NA	NA	NA
WP_038440649.1\|647927_648824_-	recombination-associated protein RdgC	S4TWL4	Salmonella_phage	8.4e-57	43.7
WP_038440652.1\|648948_650025_-	hypothetical protein	A0A0U3TGV3	Pseudomonas_phage	3.3e-07	58.7
WP_038440655.1\|650087_650522_-	single-stranded DNA-binding protein	A0A059WRL7	Vibrio_phage	2.2e-18	36.2
WP_048942413.1\|650531_651185_-	ERF family protein	A0A077KCB6	Edwardsiella_phage	3.9e-27	51.6
WP_038440657.1\|651195_651696_-	siphovirus Gp157 family protein	B4XYS3	Lactobacillus_phage	4.7e-17	36.6
WP_154231640.1\|651705_651849_-	hypothetical protein	NA	NA	NA	NA
WP_162877182.1\|651851_652016_-	hypothetical protein	NA	NA	NA	NA
WP_038440660.1\|652026_652215_-	ANR family transcriptional regulator	NA	NA	NA	NA
WP_038440665.1\|652609_652900_-	hypothetical protein	NA	NA	NA	NA
WP_005651327.1\|652984_653638_-	KilA-N domain-containing protein	D0UIM5	Aggregatibacter_phage	2.0e-44	82.6
WP_052095401.1\|653908_654211_-	hypothetical protein	NA	NA	NA	NA
WP_005687157.1\|654487_654754_+	hypothetical protein	A0A0N9STP5	Staphylococcus_phage	5.6e-09	49.2
WP_005687158.1\|654739_654979_-	hypothetical protein	A0A0M3LPU3	Mannheimia_phage	3.2e-11	48.6
WP_005688815.1\|655305_655527_-	hypothetical protein	NA	NA	NA	NA
WP_005655314.1\|655541_655712_+	DUF1508 domain-containing protein	NA	NA	NA	NA
WP_162877571.1\|656072_656240_+	hypothetical protein	NA	NA	NA	NA
WP_038440670.1\|656267_657116_-	DUF3800 domain-containing protein	A5X9G9	Aeromonas_virus	3.6e-57	43.7
WP_038440672.1\|657376_658078_-	helix-turn-helix transcriptional regulator	G8C7U1	Escherichia_phage	1.9e-24	33.6
WP_038440673.1\|658226_658442_+	helix-turn-helix domain-containing protein	Q19UN8	Mannheimia_phage	1.2e-09	52.9
WP_038440676.1\|659219_659978_+	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	2.8e-61	68.3
WP_038440679.1\|659962_660598_+	replication P	A0A1I9KFB0	Aeromonas_phage	4.8e-06	24.7
WP_005633909.1\|660594_660819_+	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
WP_038440680.1\|660855_661275_+	recombination protein NinB	Q7Y5V7	Haemophilus_phage	1.9e-64	86.2
WP_038440682.1\|661363_661900_+	recombination protein NinG	D0UIK8	Aggregatibacter_phage	7.0e-59	68.6
WP_005651339.1\|661908_662427_+	antitermination protein	G8C7V7	Escherichia_phage	3.4e-18	34.0
WP_005688862.1\|662687_662939_+	hypothetical protein	NA	NA	NA	NA
WP_005654589.1\|662919_663462_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	9.0e-46	51.4
WP_048940722.1\|663434_663770_+	DUF2570 family protein	Q7Y5U9	Haemophilus_phage	1.9e-17	50.0
663461:663478	attR	NA	NA	NA	NA
WP_042599556.1\|663681_663963_+	hypothetical protein	Q776X1	Haemophilus_phage	1.6e-30	73.3
WP_038440684.1\|664233_664707_+	DUF1441 family protein	K7PJY2	Enterobacterial_phage	3.2e-39	53.0
WP_038440686.1\|664709_666833_+\|terminase	phage terminase large subunit family protein	K7PH52	Enterobacterial_phage	4.9e-273	66.7
WP_005633930.1\|666829_667048_+	hypothetical protein	NA	NA	NA	NA
WP_038440689.1\|667051_668575_+\|portal	phage portal protein	S5MW34	Escherichia_phage	1.7e-158	57.9
WP_038440692.1\|668510_670553_+\|protease	ATP-dependent Clp protease proteolytic subunit	A0A1W6JT88	Pseudomonas_phage	1.5e-202	56.9
WP_038440695.1\|670631_670955_+	DUF2190 family protein	NA	NA	NA	NA
WP_015701509.1\|670935_671247_+	hypothetical protein	NA	NA	NA	NA
WP_015701508.1\|671249_671780_+\|tail	phage tail protein	K7PKQ5	Enterobacteria_phage	2.7e-18	50.0
WP_038440699.1\|671788_672199_+\|tail	phage tail protein	NA	NA	NA	NA
WP_038440702.1\|672201_672852_+	hypothetical protein	NA	NA	NA	NA
WP_038440705.1\|673126_673534_+	hypothetical protein	NA	NA	NA	NA
WP_038440708.1\|673578_673803_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_015701504.1\|673871_674255_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA
WP_005651224.1\|674238_674541_+	XRE family transcriptional regulator	NA	NA	NA	NA
WP_101494098.1\|674556_674793_+	hypothetical protein	NA	NA	NA	NA
WP_038440711.1\|674844_677985_+	tape measure protein	A0A1C6ZDP8	Pseudomonas_phage	1.5e-47	48.9
WP_038440713.1\|677993_678326_+\|tail	phage tail protein	H6WZM2	Escherichia_phage	2.7e-16	38.5
WP_005651234.1\|678652_678811_+	hypothetical protein	NA	NA	NA	NA
WP_005643783.1\|679070_679448_+	hypothetical protein	NA	NA	NA	NA
WP_038440718.1\|679801_680689_+	antirepressor	D0UIK6	Aggregatibacter_phage	3.6e-84	56.4
WP_038440720.1\|681105_681624_+	antirepressor	Q0H8C7	Salmonella_phage	1.3e-33	52.8
WP_038440725.1\|681667_682318_+\|tail	phage minor tail protein L	Q6JIL5	Burkholderia_virus	2.5e-34	39.6
WP_038440728.1\|682319_683027_+	C40 family peptidase	A0A1B1IV85	uncultured_Mediterranean_phage	6.9e-54	43.7
WP_080291956.1\|682965_683685_+\|tail	tail assembly protein	A0A1P8DTG7	Proteus_phage	6.1e-34	40.2
WP_038440729.1\|683688_687339_+\|tail	phage tail protein	A0A0R6PIC9	Moraxella_phage	1.6e-141	37.4
WP_038441442.1\|687535_689158_+\|tail	tail fiber protein	Q94MY0	Haemophilus_virus	4.5e-210	63.7
WP_038440732.1\|689169_689772_+	hypothetical protein	Q94MX9	Haemophilus_virus	1.6e-96	93.0
WP_013525579.1\|689768_690227_+	hypothetical protein	F6MIM0	Haemophilus_phage	4.9e-45	55.8
WP_005654873.1\|690875_691601_+\|tRNA	tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ	NA	NA	NA	NA
WP_005654871.1\|691653_692106_+	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA
WP_005649169.1\|692172_693387_+	IscS subfamily cysteine desulfurase	H7BUW1	unidentified_phage	1.5e-32	35.5
WP_005654861.1\|693446_693827_+	Fe-S cluster assembly scaffold IscU	A0A218MKD1	uncultured_virus	1.4e-53	80.6
WP_005649164.1\|693884_694208_+	iron-sulfur cluster assembly protein IscA	A0A2H4N7N5	Lake_Baikal_phage	4.4e-24	46.7
WP_011272012.1\|694220_694745_+	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA
WP_005669116.1\|694795_695482_+	DUF2625 domain-containing protein	NA	NA	NA	NA
WP_011272011.1\|695500_697360_+	Fe-S protein assembly chaperone HscA	A0A0N9QXN8	Chrysochromulina_ericina_virus	2.3e-109	42.3

DBSCAN-SWA_2

1260367 : 1344642

Mannheimia_phage(36.36%)

head,lysis,plate,tail,protease,portal,holin,capsid,tRNA,terminase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011961904.1\|1260367_1262338_+\|tRNA	tRNA(Met) cytidine acetyltransferase	NA	NA	NA	NA
WP_162627973.1\|1262334_1262508_+	DUF5363 domain-containing protein	NA	NA	NA	NA
WP_038441069.1\|1262609_1266050_+	transcription-repair coupling factor	NA	NA	NA	NA
WP_011272698.1\|1266102_1267494_-\|protease	DegQ family serine endoprotease	A0A1B1IT49	uncultured_Mediterranean_phage	7.2e-23	31.2
WP_005694317.1\|1267687_1268578_+	acetyl-CoA carboxylase, carboxyltransferase subunit beta	NA	NA	NA	NA
WP_038441072.1\|1268579_1269884_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA
WP_005689857.1\|1270171_1270852_-	vancomycin high temperature exclusion protein	NA	NA	NA	NA
WP_005689855.1\|1271009_1272086_+	homoserine O-acetyltransferase	NA	NA	NA	NA
WP_005689853.1\|1272140_1274783_-	DNA topoisomerase (ATP-hydrolyzing) subunit A	G3M9Z5	Bacillus_virus	2.1e-103	32.3
WP_005687300.1\|1275382_1277146_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA
WP_005687298.1\|1277282_1277759_-	hypothetical protein	NA	NA	NA	NA
WP_011272695.1\|1277994_1278801_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_011272694.1\|1278852_1279554_+	hydroxyacylglutathione hydrolase	A0A1X9I5D3	Streptococcus_phage	1.3e-07	28.5
WP_011272693.1\|1279597_1280458_-	SAM-dependent methyltransferase TehB	NA	NA	NA	NA
WP_038441076.1\|1280568_1282617_-\|tRNA	methionine--tRNA ligase	A0A2K9V939	Bandra_megavirus	2.2e-60	29.3
WP_038441077.1\|1282767_1283880_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA
WP_038441079.1\|1283927_1284590_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_038441453.1\|1284705_1285380_+	acylneuraminate cytidylyltransferase	NA	NA	NA	NA
WP_162690228.1\|1285451_1285607_+	hypothetical protein	NA	NA	NA	NA
WP_011272688.1\|1286088_1287099_-\|portal	phage portal protein	Q19UT6	Mannheimia_phage	1.8e-116	60.4
WP_038441084.1\|1287108_1288890_-\|terminase	terminase	A0A0M3LRV4	Mannheimia_phage	5.0e-218	65.4
WP_005668477.1\|1289054_1289879_+\|capsid	GPO family capsid scaffolding protein	A0A0M3LNM2	Mannheimia_phage	1.4e-66	63.2
WP_005668475.1\|1289899_1290949_+\|capsid	phage major capsid protein, P2 family	Q19UT3	Mannheimia_phage	4.4e-89	51.6
WP_011272685.1\|1290960_1291611_+\|terminase	terminase	Q19US0	Mannheimia_phage	4.1e-45	46.0
WP_005668469.1\|1291904_1292411_+\|head	head completion/stabilization protein	A0A0M3LNL8	Mannheimia_phage	2.8e-33	51.0
WP_005668467.1\|1292410_1292620_+\|tail	tail protein X	NA	NA	NA	NA
WP_005668464.1\|1292621_1292843_+\|holin	phage holin family protein	NA	NA	NA	NA
WP_005668462.1\|1292835_1293354_+	lysozyme	A0A0M3LPQ1	Mannheimia_phage	9.5e-37	46.6
WP_011272684.1\|1293338_1293689_+	chemotaxis protein	NA	NA	NA	NA
WP_005672208.1\|1293863_1294079_+	TraR/DksA family transcriptional regulator	A0A0M3LS11	Mannheimia_phage	1.1e-10	47.9
WP_038441087.1\|1294075_1294339_+	hypothetical protein	NA	NA	NA	NA
WP_038441089.1\|1294304_1294775_+\|tail	phage tail protein	E5G6N3	Salmonella_phage	7.3e-28	45.3
WP_011272680.1\|1294774_1295236_+	phage virion morphogenesis protein	A0A2H4J927	uncultured_Caudovirales_phage	5.7e-25	48.2
WP_005653079.1\|1295236_1295584_-	hypothetical protein	NA	NA	NA	NA
WP_011272679.1\|1295687_1295870_+	phage virion morphogenesis protein	Q19UR2	Mannheimia_phage	8.8e-06	47.8
WP_011272678.1\|1295880_1296219_-	hypothetical protein	NA	NA	NA	NA
WP_075913143.1\|1296294_1296468_+	phage virion morphogenesis protein	Q19UR2	Mannheimia_phage	3.2e-05	53.3
WP_038441093.1\|1296445_1296706_-	hypothetical protein	NA	NA	NA	NA
WP_038441095.1\|1296776_1299584_+\|tail	phage tail tape measure protein	E5G6Q1	Salmonella_phage	2.8e-82	31.0
WP_162836930.1\|1299660_1299828_+	hypothetical protein	NA	NA	NA	NA
WP_006995348.1\|1299805_1300258_+	hypothetical protein	NA	NA	NA	NA
WP_011272674.1\|1300355_1300913_+	hypothetical protein	NA	NA	NA	NA
WP_005653088.1\|1300921_1301350_+	hypothetical protein	NA	NA	NA	NA
WP_011272673.1\|1301453_1302053_+\|plate	phage baseplate assembly protein V	A0A0M3LPY9	Mannheimia_phage	4.2e-44	66.0
WP_005633786.1\|1302054_1302393_+	GPW/gp25 family protein	Q19UQ6	Mannheimia_phage	3.4e-19	56.6
WP_038441098.1\|1303294_1303831_+\|tail	phage tail protein I	M1T2R2	Escherichia_phage	5.4e-51	53.1
WP_052095409.1\|1303839_1304067_+\|tail	phage tail protein	A0A1I9KF43	Aeromonas_phage	3.5e-12	48.6
WP_052095410.1\|1304109_1306362_+\|tail	phage tail protein	Q94MY0	Haemophilus_virus	1.1e-241	65.1
WP_011272669.1\|1306373_1306976_+	hypothetical protein	Q94MX9	Haemophilus_virus	1.7e-93	90.0
WP_011272668.1\|1306972_1307476_+	hypothetical protein	F6MIM0	Haemophilus_phage	1.7e-51	63.6
WP_011272667.1\|1307532_1308354_+	hypothetical protein	NA	NA	NA	NA
WP_005642880.1\|1308367_1308736_+	hypothetical protein	NA	NA	NA	NA
WP_038441454.1\|1308752_1309892_+	hypothetical protein	NA	NA	NA	NA
WP_011272665.1\|1309901_1310429_+	hypothetical protein	NA	NA	NA	NA
WP_011272664.1\|1310432_1311197_+	hypothetical protein	NA	NA	NA	NA
WP_038441101.1\|1312858_1313314_+	ribosome maturation factor RimP	NA	NA	NA	NA
WP_005631625.1\|1313330_1314818_+	transcription termination/antitermination protein NusA	NA	NA	NA	NA
WP_011272663.1\|1314829_1317364_+	translation initiation factor IF-2	A0A2H4UTS4	Bodo_saltans_virus	1.8e-27	26.4
WP_038441456.1\|1317442_1320610_-	type I restriction endonuclease subunit R	A0A220A398	Liberibacter_phage	1.2e-78	30.8
WP_011272661.1\|1320611_1321658_-	SIR2 family protein	NA	NA	NA	NA
WP_011272660.1\|1321650_1322916_-	restriction endonuclease subunit S	NA	NA	NA	NA
WP_011272659.1\|1322908_1324579_-	type I restriction-modification system subunit M	A0A2H4PQP4	Staphylococcus_phage	1.4e-49	30.5
WP_005628626.1\|1324743_1325130_+	30S ribosome-binding factor RbfA	NA	NA	NA	NA
WP_011272658.1\|1325129_1326050_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_038441104.1\|1326139_1327264_+	bifunctional chorismate mutase/prephenate dehydrogenase	NA	NA	NA	NA
WP_011272656.1\|1327296_1328136_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	A0A2I7SAX1	Vibrio_phage	6.1e-41	38.9
WP_038441106.1\|1328262_1329048_-	Zn-ribbon-containing protein	NA	NA	NA	NA
WP_005631781.1\|1329038_1329419_-	SufE family protein	NA	NA	NA	NA
WP_038441108.1\|1329415_1330615_-	cysteine desulfurase	Q2XUY6	environmental_halophage	1.7e-60	31.8
WP_005694472.1\|1330616_1331099_-	thermonuclease family protein	A0A0R6PHV6	Moraxella_phage	1.2e-30	47.7
WP_005650310.1\|1331213_1331636_+	CidA/LrgA family protein	NA	NA	NA	NA
WP_005657449.1\|1331654_1332350_+\|lysis	CidB/LrgB family autolysis modulator	NA	NA	NA	NA
WP_038441457.1\|1332472_1333828_+	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA
WP_038441111.1\|1333921_1335865_+	ABC transporter ATP-binding protein	A0A2K9L3Z8	Tupanvirus	9.4e-53	29.2
WP_038441459.1\|1335948_1337031_-	extracellular solute-binding protein	NA	NA	NA	NA
WP_038441113.1\|1337160_1337931_-	spermidine/putrescine ABC transporter permease PotC	NA	NA	NA	NA
WP_005650698.1\|1337930_1338791_-	spermidine/putrescine ABC transporter permease PotB	Q6GZ02	Mycoplasma_phage	4.5e-15	28.2
WP_005650696.1\|1338774_1339893_-	spermidine/putrescine ABC transporter ATP-binding protein PotA	Q6GZ03	Mycoplasma_phage	1.9e-29	37.1
WP_038441117.1\|1340189_1341428_+	peptidase T	NA	NA	NA	NA
WP_005650692.1\|1341999_1342482_-	DNA starvation/stationary phase protection protein	NA	NA	NA	NA
WP_005650690.1\|1342755_1343634_+	cytidine deaminase	NA	NA	NA	NA
WP_011272649.1\|1343676_1344642_-\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA

DBSCAN-SWA_3

1396831 : 1408875

Acinetobacter_phage(42.86%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_074031221.1\|1396831_1397836_-	phosphate ABC transporter substrate-binding protein PstS	A0A222YW41	Synechococcus_phage	1.2e-51	40.5
WP_005650594.1\|1398353_1398842_+	non-heme ferritin	NA	NA	NA	NA
WP_005656740.1\|1398857_1399355_+	non-heme ferritin	NA	NA	NA	NA
WP_172643539.1\|1399477_1400368_+	glycosyltransferase	A7IW34	Paramecium_bursaria_Chlorella_virus	2.9e-17	29.7
WP_005687196.1\|1400469_1402026_+	anthranilate synthase component I	A0A0B5J984	Pandoravirus	2.4e-22	33.2
WP_005687195.1\|1402038_1402626_+	aminodeoxychorismate/anthranilate synthase component II	A0A0P0IKJ1	Acinetobacter_phage	2.2e-34	40.0
WP_005662273.1\|1402674_1403061_+	tautomerase family protein	NA	NA	NA	NA
WP_038441158.1\|1403113_1404115_+	anthranilate phosphoribosyltransferase	A0A0N7IRD9	Acinetobacter_phage	7.5e-46	35.3
WP_038441160.1\|1404139_1405570_+	bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF	A0A0P0IR83	Acinetobacter_phage	3.9e-32	37.2
WP_038441162.1\|1405700_1405976_+	hydrogenase maturation factor HybG	NA	NA	NA	NA
WP_038441164.1\|1406010_1408875_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	5.1e-148	37.4

DBSCAN-SWA_4

1418020 : 1434289

Haemophilus_phage(42.86%)

holin,terminase,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_005650554.1\|1418020_1418197_-	DUF2213 domain-containing protein	Q7Y5U2	Haemophilus_phage	8.5e-22	93.1
WP_075913359.1\|1418337_1419648_-\|capsid	minor capsid protein	Q7Y5U5	Haemophilus_phage	5.3e-108	78.3
WP_011272621.1\|1419547_1420882_-	DUF1073 domain-containing protein	Q7Y5U6	Haemophilus_phage	2.1e-213	84.2
WP_011272620.1\|1420883_1422227_-\|terminase	PBSX family phage terminase large subunit	A0A220NQL3	Acinetobacter_phage	2.8e-125	54.4
WP_011272619.1\|1422213_1422726_-\|terminase	terminase small subunit	A0A1X9SFE5	Acinetobacter_phage	1.0e-19	39.2
WP_011272618.1\|1422770_1423049_+	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	6.5e-16	66.2
WP_005693951.1\|1423050_1423332_-	hypothetical protein	Q776X1	Haemophilus_phage	9.4e-31	73.3
WP_011272617.1\|1423243_1423567_-	DUF2570 family protein	Q7Y5U9	Haemophilus_phage	7.8e-21	54.6
WP_032826234.1\|1423559_1424162_-	glycoside hydrolase family 19 protein	Q7Y5V0	Haemophilus_phage	3.7e-56	53.4
WP_005650535.1\|1424130_1424487_-\|holin	phage holin, lambda family	NA	NA	NA	NA
WP_015702297.1\|1424610_1424748_-	hypothetical protein	NA	NA	NA	NA
WP_038441183.1\|1424823_1425492_-	Bro-N domain-containing protein	D0UIM5	Aggregatibacter_phage	6.7e-67	62.3
WP_005666914.1\|1425849_1426815_+	hypothetical protein	Q8HA04	Enterobacteria_phage	1.2e-88	58.8
WP_005650528.1\|1426864_1427236_-	hypothetical protein	NA	NA	NA	NA
WP_038441185.1\|1427266_1427932_-	HNH endonuclease	A0A2I7QND8	Vibrio_phage	2.2e-38	42.8
WP_038441188.1\|1428561_1428978_-	recombination protein NinB	Q7Y5V7	Haemophilus_phage	1.1e-62	84.7
WP_005633909.1\|1429014_1429239_-	hypothetical protein	A0A0M3LR43	Mannheimia_phage	1.1e-10	47.9
WP_038440679.1\|1429235_1429871_-	replication P	A0A1I9KFB0	Aeromonas_phage	4.8e-06	24.7
WP_038441190.1\|1429855_1430614_-	helix-turn-helix domain-containing protein	D0UIL5	Aggregatibacter_phage	1.0e-63	67.8
WP_038441201.1\|1430610_1431285_-	phage antirepressor KilAC domain-containing protein	D0UIL6	Aggregatibacter_phage	1.1e-80	68.4
WP_011272605.1\|1431333_1431774_-	hypothetical protein	A0A0U4B0E3	Pseudomonas_phage	1.5e-14	32.2
WP_005650512.1\|1431822_1432011_-	helix-turn-helix domain-containing protein	Q7Y5W4	Haemophilus_phage	6.5e-28	93.5
WP_005650509.1\|1432121_1432820_+	helix-turn-helix transcriptional regulator	Q7Y5W5	Haemophilus_phage	1.4e-112	84.5
WP_011272604.1\|1432871_1433951_+	hypothetical protein	NA	NA	NA	NA
WP_005666912.1\|1433953_1434289_+	STAS-like domain-containing protein	A0A2H4J4X6	uncultured_Caudovirales_phage	8.1e-13	41.5

DBSCAN-SWA_5

1673622 : 1682136

uncultured_Caudovirales_phage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011272434.1\|1673622_1674306_+	7-cyano-7-deazaguanine synthase QueC	A0A2H4J8Q7	uncultured_Caudovirales_phage	2.3e-54	50.7
WP_011272433.1\|1674298_1674724_+	6-carboxytetrahydropterin synthase QueD	A0A1U9WRB3	Streptococcus_virus	2.3e-20	42.0
WP_005686506.1\|1674724_1675360_+	7-carboxy-7-deazaguanine synthase QueE	S4TZT1	uncultured_phage	8.7e-16	30.3
WP_038441473.1\|1675974_1678155_+	DNA helicase II	A7KV33	Bacillus_phage	2.3e-116	37.6
WP_005647473.1\|1678244_1679246_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_005653671.1\|1679260_1680148_+	ABC transporter permease subunit	NA	NA	NA	NA
WP_005647479.1\|1680157_1681150_+	dipeptide ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	2.0e-14	30.8
WP_038441344.1\|1681152_1682136_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	1.4e-20	33.2

DBSCAN-SWA_6

1808834 : 1817905

Escherichia_phage(83.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011272359.1\|1808834_1810679_+	ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	2.8e-22	29.3
WP_005651690.1\|1810803_1811082_-	heavy-metal-associated domain-containing protein	NA	NA	NA	NA
WP_005656013.1\|1811090_1811453_-	membrane protein	NA	NA	NA	NA
WP_011272358.1\|1811427_1812537_-	transglutaminase family protein	NA	NA	NA	NA
WP_038441397.1\|1812789_1815213_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	2.6e-222	50.5
WP_038441398.1\|1815223_1815841_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	5.8e-73	57.8
WP_038441400.1\|1815842_1816682_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	1.1e-18	31.9
WP_012055368.1\|1816793_1817405_+	Tat proofreading chaperone DmsD	A0A077SLS7	Escherichia_phage	2.3e-21	32.5
WP_038441403.1\|1817404_1817905_+	ferredoxin-type protein NapF	A0A077SLP0	Escherichia_phage	7.6e-15	32.9

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009610

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CRISPR-Cas detection and classification

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection