CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009584	Corynebacterium ulcerans strain 210931 plasmid pCul210931, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP009583	Corynebacterium ulcerans strain 210931, complete genome	3 crisprs	cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5,cas2,csb3,csb2gr5,csb1gr7,DEDDh,csa3,WYL,DinG	1	32	3	1

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009583_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009583_1

27292-28725

TypeI-E

I-C,I-E,II-B

Consensus_repeat	Method
GGAACTACCTCCGCATACGCGGAGAAAAG	PILER-CR
GGAACTACCTCCGCATACGCGGAGAAAAG	CRISPRCasFinder
GGAACTACCTCCGCATACGCGGAGAAAAG	CRT

23 spacers

cas2,cas1,cas3,cas6e,cas8e,cse2gr11,cas7,cas5

The CRISPR arrays of NZ_CP009583_1

>merge|NZ_CP009583|1|27292-28725|PILER-CR,CRISPRCasFinder,CRT
GGAACTACCTCCGCATACGCGGAGAAAAGAATCGCGGCCACTAGAAGCCATGTGATTAAGTGCGGAACTACCTCCGCATACGCGGAGAAAAGCAGGGGCAGCGGAAAGTGTTTTCTGCAGCACGGGAACTACCTCCGCATACGCGGAGAAAAGTGCTCAAGCGATGCATTCAACTTCTGCAACTCGGAACTACCTCCGCATACGCGGAGAAAAGTACCAGGCGGCTGCTAGGAACCCCCAGCGGGGGGAACTACCTCCGCATACGCGGAGAAAAGCGTTTCTTGGTTTGTGTAAGTAAGGGGAGAGAGGAACTACCTCCGCATACGCGGAGAAAAGACCCAATCGCAGGCTTCGCCGGCGGTTTCGCCGGAACTACCTCCGCATACGCGGAGAAAAGTCGAGTTTCACGGATCCCTGTAGGCCCCATAGGGAACTACCTCCGCATACGCGGAGAAAAGTCGAGTTTCACGGATCCCTGTAGGCCCCATAGGGAACTACCTCCGCATACGCGGAGAAAAGTAGAGGAGGGGGTTGGAAAACCGCCAAAATACGGAACTACCTCCGCATACGCGGAGAAAAGCCTTTACCTTGCGCAGAACAAGCTGCACAGCAGGAACTACCTCCGCATACGCGGAGAAAAGAAGGGCATTCCACCTCATCGGGCAATCGCCTCGGAACTACCTCCGCATACGCGGAGAAAAGACCGGGATCAGGCCAGGTGTGAGCTTCGCGAAGGAACTACCTCCGCATACGCGGAGAAAAGCGGCACGCCTCATAGGGCGCTTGAGTATCGAAGGAACTACCTCCGCATACGCGGAGAAAAGTTTAAGCCCGCGCAGGGAAAGTACCGCTTCCTGGAACTACCTCCGCATACGCGGAGAAAAGCGGGTTTCCGCCGCATCAAGGCACTGCTTCGCGGAACTACCTCCGCATACGCGGAGAAAAGAAGGCTCATTCTGTGGCTTTGCGCACCGCGTTGGAACTACCTCCGCATACGCGGAGAAAAGCACCCCCGGCACCCTTACCGGCTGGGGGAACCGGAACTACCTCCGCATACGCGGAGAAAAGAGGTCAATAGTGGCGACAATCGGTATGGGTTTGGAACTACCTCCGCATACGCGGAGAAAAGGGTAAGCGCCACAGGCGCTAGGGAGGCGGTCAGGAACTACCTCCGCATACGCGGAGAAAAGGGGTAGCTACCGACGCTTTTGATATAGGTAATGGAACTACCTCCGCATACGCGGAGAAAAGATGCTCTTGACGGTGCCGAACTCAGCCAGGTAGGAACTACCTCCGCATACGCGGAGAAAAGATGGCGGGCTAGGTGATATTTGGGATAAAGTGGGAACTACCTCCGCATACGCGGAGAAAAGGAATACGGATTCCGGTGCCACAAGGCCATAATGGAACTACCTCCGCATACGCGGAGAAAAG

>NZ_CP009583|1|1|27292-28725|PILER-CR
GGAACTACCTCCGCATACGCGGAGAAAAG	AATCGCGGCCACTAGAAGCCATGTGATTAAGTGC
GGAACTACCTCCGCATACGCGGAGAAAAG	CAGGGGCAGCGGAAAGTGTTTTCTGCAGCACG
GGAACTACCTCCGCATACGCGGAGAAAAG	TGCTCAAGCGATGCATTCAACTTCTGCAACTC
GGAACTACCTCCGCATACGCGGAGAAAAG	TACCAGGCGGCTGCTAGGAACCCCCAGCGGGG
GGAACTACCTCCGCATACGCGGAGAAAAG	CGTTTCTTGGTTTGTGTAAGTAAGGGGAGAGA
GGAACTACCTCCGCATACGCGGAGAAAAG	ACCCAATCGCAGGCTTCGCCGGCGGTTTCGCC
GGAACTACCTCCGCATACGCGGAGAAAAG	TCGAGTTTCACGGATCCCTGTAGGCCCCATAG
GGAACTACCTCCGCATACGCGGAGAAAAG	TCGAGTTTCACGGATCCCTGTAGGCCCCATAG
GGAACTACCTCCGCATACGCGGAGAAAAG	TAGAGGAGGGGGTTGGAAAACCGCCAAAATAC
GGAACTACCTCCGCATACGCGGAGAAAAG	CCTTTACCTTGCGCAGAACAAGCTGCACAGCA
GGAACTACCTCCGCATACGCGGAGAAAAG	AAGGGCATTCCACCTCATCGGGCAATCGCCTC
GGAACTACCTCCGCATACGCGGAGAAAAG	ACCGGGATCAGGCCAGGTGTGAGCTTCGCGAA
GGAACTACCTCCGCATACGCGGAGAAAAG	CGGCACGCCTCATAGGGCGCTTGAGTATCGAA
GGAACTACCTCCGCATACGCGGAGAAAAG	TTTAAGCCCGCGCAGGGAAAGTACCGCTTCCT
GGAACTACCTCCGCATACGCGGAGAAAAG	CGGGTTTCCGCCGCATCAAGGCACTGCTTCGC
GGAACTACCTCCGCATACGCGGAGAAAAG	AAGGCTCATTCTGTGGCTTTGCGCACCGCGTT
GGAACTACCTCCGCATACGCGGAGAAAAG	CACCCCCGGCACCCTTACCGGCTGGGGGAACC
GGAACTACCTCCGCATACGCGGAGAAAAG	AGGTCAATAGTGGCGACAATCGGTATGGGTTT
GGAACTACCTCCGCATACGCGGAGAAAAG	GGTAAGCGCCACAGGCGCTAGGGAGGCGGTCA
GGAACTACCTCCGCATACGCGGAGAAAAG	GGGTAGCTACCGACGCTTTTGATATAGGTAAT
GGAACTACCTCCGCATACGCGGAGAAAAG	ATGCTCTTGACGGTGCCGAACTCAGCCAGGTA
GGAACTACCTCCGCATACGCGGAGAAAAG	ATGGCGGGCTAGGTGATATTTGGGATAAAGTG
GGAACTACCTCCGCATACGCGGAGAAAAG	GAATACGGATTCCGGTGCCACAAGGCCATAAT
GGAACTACCTCCGCATACGCGGAGAAAAG

>NZ_CP009583|1|1|27292-28725|CRISPRCasFinder
GGAACTACCTCCGCATACGCGGAGAAAAG	AATCGCGGCCACTAGAAGCCATGTGATTAAGTGC
GGAACTACCTCCGCATACGCGGAGAAAAG	CAGGGGCAGCGGAAAGTGTTTTCTGCAGCACG
GGAACTACCTCCGCATACGCGGAGAAAAG	TGCTCAAGCGATGCATTCAACTTCTGCAACTC
GGAACTACCTCCGCATACGCGGAGAAAAG	TACCAGGCGGCTGCTAGGAACCCCCAGCGGGG
GGAACTACCTCCGCATACGCGGAGAAAAG	CGTTTCTTGGTTTGTGTAAGTAAGGGGAGAGA
GGAACTACCTCCGCATACGCGGAGAAAAG	ACCCAATCGCAGGCTTCGCCGGCGGTTTCGCC
GGAACTACCTCCGCATACGCGGAGAAAAG	TCGAGTTTCACGGATCCCTGTAGGCCCCATAG
GGAACTACCTCCGCATACGCGGAGAAAAG	TCGAGTTTCACGGATCCCTGTAGGCCCCATAG
GGAACTACCTCCGCATACGCGGAGAAAAG	TAGAGGAGGGGGTTGGAAAACCGCCAAAATAC
GGAACTACCTCCGCATACGCGGAGAAAAG	CCTTTACCTTGCGCAGAACAAGCTGCACAGCA
GGAACTACCTCCGCATACGCGGAGAAAAG	AAGGGCATTCCACCTCATCGGGCAATCGCCTC
GGAACTACCTCCGCATACGCGGAGAAAAG	ACCGGGATCAGGCCAGGTGTGAGCTTCGCGAA
GGAACTACCTCCGCATACGCGGAGAAAAG	CGGCACGCCTCATAGGGCGCTTGAGTATCGAA
GGAACTACCTCCGCATACGCGGAGAAAAG	TTTAAGCCCGCGCAGGGAAAGTACCGCTTCCT
GGAACTACCTCCGCATACGCGGAGAAAAG	CGGGTTTCCGCCGCATCAAGGCACTGCTTCGC
GGAACTACCTCCGCATACGCGGAGAAAAG	AAGGCTCATTCTGTGGCTTTGCGCACCGCGTT
GGAACTACCTCCGCATACGCGGAGAAAAG	CACCCCCGGCACCCTTACCGGCTGGGGGAACC
GGAACTACCTCCGCATACGCGGAGAAAAG	AGGTCAATAGTGGCGACAATCGGTATGGGTTT
GGAACTACCTCCGCATACGCGGAGAAAAG	GGTAAGCGCCACAGGCGCTAGGGAGGCGGTCA
GGAACTACCTCCGCATACGCGGAGAAAAG	GGGTAGCTACCGACGCTTTTGATATAGGTAAT
GGAACTACCTCCGCATACGCGGAGAAAAG	ATGCTCTTGACGGTGCCGAACTCAGCCAGGTA
GGAACTACCTCCGCATACGCGGAGAAAAG	ATGGCGGGCTAGGTGATATTTGGGATAAAGTG
GGAACTACCTCCGCATACGCGGAGAAAAG	GAATACGGATTCCGGTGCCACAAGGCCATAAT
GGAACTACCTCCGCATACGCGGAGAAAAG

>NZ_CP009583|1|1|27292-28725|CRT
GGAACTACCTCCGCATACGCGGAGAAAAG	AATCGCGGCCACTAGAAGCCATGTGATTAAGTGC
GGAACTACCTCCGCATACGCGGAGAAAAG	CAGGGGCAGCGGAAAGTGTTTTCTGCAGCACG
GGAACTACCTCCGCATACGCGGAGAAAAG	TGCTCAAGCGATGCATTCAACTTCTGCAACTC
GGAACTACCTCCGCATACGCGGAGAAAAG	TACCAGGCGGCTGCTAGGAACCCCCAGCGGGG
GGAACTACCTCCGCATACGCGGAGAAAAG	CGTTTCTTGGTTTGTGTAAGTAAGGGGAGAGA
GGAACTACCTCCGCATACGCGGAGAAAAG	ACCCAATCGCAGGCTTCGCCGGCGGTTTCGCC
GGAACTACCTCCGCATACGCGGAGAAAAG	TCGAGTTTCACGGATCCCTGTAGGCCCCATAG
GGAACTACCTCCGCATACGCGGAGAAAAG	TCGAGTTTCACGGATCCCTGTAGGCCCCATAG
GGAACTACCTCCGCATACGCGGAGAAAAG	TAGAGGAGGGGGTTGGAAAACCGCCAAAATAC
GGAACTACCTCCGCATACGCGGAGAAAAG	CCTTTACCTTGCGCAGAACAAGCTGCACAGCA
GGAACTACCTCCGCATACGCGGAGAAAAG	AAGGGCATTCCACCTCATCGGGCAATCGCCTC
GGAACTACCTCCGCATACGCGGAGAAAAG	ACCGGGATCAGGCCAGGTGTGAGCTTCGCGAA
GGAACTACCTCCGCATACGCGGAGAAAAG	CGGCACGCCTCATAGGGCGCTTGAGTATCGAA
GGAACTACCTCCGCATACGCGGAGAAAAG	TTTAAGCCCGCGCAGGGAAAGTACCGCTTCCT
GGAACTACCTCCGCATACGCGGAGAAAAG	CGGGTTTCCGCCGCATCAAGGCACTGCTTCGC
GGAACTACCTCCGCATACGCGGAGAAAAG	AAGGCTCATTCTGTGGCTTTGCGCACCGCGTT
GGAACTACCTCCGCATACGCGGAGAAAAG	CACCCCCGGCACCCTTACCGGCTGGGGGAACC
GGAACTACCTCCGCATACGCGGAGAAAAG	AGGTCAATAGTGGCGACAATCGGTATGGGTTT
GGAACTACCTCCGCATACGCGGAGAAAAG	GGTAAGCGCCACAGGCGCTAGGGAGGCGGTCA
GGAACTACCTCCGCATACGCGGAGAAAAG	GGGTAGCTACCGACGCTTTTGATATAGGTAAT
GGAACTACCTCCGCATACGCGGAGAAAAG	ATGCTCTTGACGGTGCCGAACTCAGCCAGGTA
GGAACTACCTCCGCATACGCGGAGAAAAG	ATGGCGGGCTAGGTGATATTTGGGATAAAGTG
GGAACTACCTCCGCATACGCGGAGAAAAG	GAATACGGATTCCGGTGCCACAAGGCCATAAT
GGAACTACCTCCGCATACGCGGAGAAAAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009583.1\|WP_013910439.1\|28743_29115_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	pfam09707_cas2_CAS-I-E	gnl\|CDD\|378244
NZ_CP009583.1\|WP_038621190.1\|30065_32759_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP009583.1\|WP_029975041.1\|33705_35319_+\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cls000721_cas8e_CAS-I-E	unknown
NZ_CP009583.1\|WP_013910445.1\|35908_36976_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	pfam09344_cas7_CAS-I-E	gnl\|CDD\|378153
NZ_CP009583.1\|WP_029975046.1\|39205_40129_+\|phospholipase-D	unknown	unknown	gnl\|CDD\|176518
NZ_CP009583.1\|WP_029975400.1\|17689_18394_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|172341
NZ_CP009583.1\|WP_029975397.1\|20879_22805_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380076
NZ_CP009583.1\|WP_052096378.1\|26996_27263_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009583.1\|WP_013910440.1\|29115_30069_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP009583.1\|WP_029975396.1\|22879_23266_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009583.1\|WP_029975044.1\|37756_38791_-\|transposase	unknown	unknown	gnl\|CDD\|226202
NZ_CP009583.1\|WP_080745468.1\|23410_23722_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009583.1\|WP_014525095.1\|35315_35909_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	mkCas0096_cse2gr11_CAS-I-E	gnl\|CDD\|274193
NZ_CP009583.1\|WP_038621186.1\|24370_25444_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|368892
NZ_CP009583.1\|WP_014525079.1\|18470_19007_+\|peptidylprolyl-isomerase	unknown	unknown	gnl\|CDD\|223725
NZ_CP009583.1\|WP_013910437.1\|25674_25902_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|375921
NZ_CP009583.1\|WP_014525096.1\|36987_37680_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|187776
NZ_CP009583.1\|WP_029975040.1\|32779_33490_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09727_cas6e_CAS-I-E	gnl\|CDD\|187858
NZ_CP009583.1\|WP_029975394.1\|23811_24384_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009583.1\|WP_029975398.1\|19090_19831_+\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759

Protein	Function_ID	Function_description	E-value
NZ_CP009583.1\|WP_013910439.1\|28743_29115_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|378244	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978). This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element.	9.67195e-22
NZ_CP009583.1\|WP_014525095.1\|35315_35909_+\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|274193	TIGR02548, CRISPR_system_Cascade_subunit_CasB, CRISPR type I-E/ECOLI-associated protein CasB/Cse2. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family is found in Ecoli subtype CRISPR/Cas regions of many bacteria, most of which are mesophiles, and not in Archaea. It was designated Cse2 originally, and renamed CasB based on its characterization in the CASCADE complex.	1.28685e-07
NZ_CP009583.1\|WP_013910445.1\|35908_36976_+\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|378153	pfam09344, Cas_CT1975, CT1975-like protein. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum.	1.8369e-81
NZ_CP009583.1\|WP_029975046.1\|39205_40129_+\|phospholipase-D	gnl\|CDD\|176518	cd08576, GDPD_like_SMaseD_PLD, Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline and lysophosphatidic acid (LPA), which is a multifunctional phospholipid involved in platelet aggregation, endothelial hyperpermeability, and pro-inflammatory responses. Loxosceles spider venoms' SMases D are the principal toxins responsible for dermonecrosis and complement dependent haemolysis induced by spider venom. Due to amino acid substitutions at the entrance to the active-site pocket, some members lack activity. The typical GDPD domain consists of a TIM barrel and a small insertion domain named as the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. Although proteins in this family contain a non-typical GDPD domain which lacks the GDPD-I, their catalytic mechanisms are based on Mg2+-dependent acid-base reactions similar to GDPD proteins. They might be divergent members of the GDPD family. Moreover, this family does not belong to phospholipase D (PLD) superfamily, since it lacks the conserved HKD sequence motif that characterizes the catalytic center of the PLD superfamily. It belongs to the superfamily of PLC-like phosphodiesterases.	1.99273e-85
NZ_CP009583.1\|WP_029975400.1\|17689_18394_-\|hypothetical-protein	gnl\|CDD\|172341	PRK13808, PRK13808, adenylate kinase; Provisional.	0.00724347
NZ_CP009583.1\|WP_029975397.1\|20879_22805_+\|hypothetical-protein	gnl\|CDD\|380076	pfam17961, Big_8, Bacterial Ig domain. This entry represents a bacterial Ig-fold domain that is found in a wide range of bacterial cell surface adherence proteins.	1.74892e-10
NZ_CP009583.1\|WP_038621190.1\|30065_32759_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	1.06156e-53
NZ_CP009583.1\|WP_029975044.1\|37756_38791_-\|transposase	gnl\|CDD\|226202	COG3677, COG3677, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	0.000471935
NZ_CP009583.1\|WP_013910440.1\|29115_30069_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	4.55153e-71
NZ_CP009583.1\|WP_013910437.1\|25674_25902_-\|hypothetical-protein	gnl\|CDD\|375921	pfam18495, VbhA, Antitoxin VbhA. VbhT is a bacterial Fic protein of the mammalian pathogen B. schoenbuchensis7,8. It is composed of an N-terminal FIC domain and a C-terminal BID domain. FIC domains are known to catalyse adenylylation (also called AMPylation). This entry represents VbhA, an antitoxin that binds FIC domain (filamentation induced by cyclic AMP) of VbhT and inhibits its activity. It inhibits the adenylylation activity of VbhT by positioning close to the putative ATP-binding site, hence competing with ATP binding.	0.000240551
NZ_CP009583.1\|WP_014525079.1\|18470_19007_+\|peptidylprolyl-isomerase	gnl\|CDD\|223725	COG0652, PpiB, Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family [Posttranslational modification, protein turnover, chaperones].	7.27218e-66
NZ_CP009583.1\|WP_038621186.1\|24370_25444_-\|hypothetical-protein	gnl\|CDD\|368892	pfam06414, Zeta_toxin, Zeta toxin. This family consists of several bacterial zeta toxin proteins. Zeta toxin is thought to be part of a postregulational killing system in bacteria. It relies on antitoxin/toxin systems that secure stable inheritance of low and medium copy number plasmids during cell division and kill cells that have lost the plasmid.	0.000162791
NZ_CP009583.1\|WP_014525096.1\|36987_37680_+\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|187776	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas5 is a RAMP superfamily protein; Subunit of the Cascade complex.	4.0132e-27
NZ_CP009583.1\|WP_029975040.1\|32779_33490_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|187858	cd09727, Cas6_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas6e. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6e is an endoribonuclease that generates crRNA; This family is specific for CRISPR/Cas system I-E subtype; Homologous to Cas6 (RAMP superfamily protein); Possesses double RRM/ferredoxin fold; also known as Cse3 family.	2.09636e-33
NZ_CP009583.1\|WP_029975398.1\|19090_19831_+\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	2.17068e-21

>NZ_CP009583.1|WP_052096378.1|26996_27263_-|hypothetical-protein
MQDYIDRFNTNVFIEPSTTKLYQSRSGAKARADLLESFGYKAIVQRSAPMVWPEGDNTTVKTTKINEVFATIKTLVNHGVVKSADKLL
>NZ_CP009583.1|WP_013910437.1|25674_25902_-|hypothetical-protein
MDMMNPTERISEDQLRQIRNDLASAEIEGQPRTPEDEKILAAYYLGEISEQESFESLLKAAGVHPPYPSINHDLD
>NZ_CP009583.1|WP_038621186.1|24370_25444_-|hypothetical-protein
MGMVDTPEGMSPMEAAGLIHAESGDIADVVTKMALADGKNVIFDITMTTSGSVTGRIKKAKAHGYDEFTGVYIDVPLEVSLKSAQERYIRGAQEYTDGVGYGGRYVPESAIMRAQVPGSDKTRNRQVFEGLTASKVFTATEIWDNNRQDKNGNRQPAALIERTTTNGKEHHRPVRSGGSDDGRRETSTRQRTEGAGNRLGHDSGVRRPAGPGRSTDQDSSSRNAREDHDGTSKRNVQPRSNNIHLNQTPLATQTSPVVPTTGHYKGKTVHNIDNADDILKGHDLPEGMKAVIGAYGEIALKFPNKESEREYRKKHGKNFLNVTTGAQAALHDAVKNNDAIPASFFTYTEVTVPVGWV
>NZ_CP009583.1|WP_029975394.1|23811_24384_-|hypothetical-protein
MDGCKDFTCLIPMRTVWVVAEFFRLIFSFLTAENVIFSFLSKENVVFSSSYRQRKRLEHLKFLDEALEREWEKDDEESIKKQIKEIEGKFSGKHWVRQPSWMEVAIAGAMITSLTLIVSGAIFFVSHILSEYILRENGWEQGGVLALELRVLIIGILLFLIIVLSAPILLDWPGSKAPDTRKKKKKWGKR
>NZ_CP009583.1|WP_080745468.1|23410_23722_-|hypothetical-protein
MMINNIYNRIKRATDGKVFYGVGASPENQDNISIDAGYVEALLEYGYLDISLKQEFLELWLTDDEHEDLEALDYVQDLTYKMLLKYADMTPRVDVSCFLKEEG
>NZ_CP009583.1|WP_029975396.1|22879_23266_-|hypothetical-protein
MTNTFTALTERGEGWWVVQLKEDPGLLTQTRRLDQIADMVRDALELFPELTDDPYKDIVNIEFREGESIADIANQAVQANQAAKQAQEEASQLMRQAAAELSQKGLSYRDIGTLLGVSFQRAQKLATT
>NZ_CP009583.1|WP_029975397.1|20879_22805_+|hypothetical-protein
MENMSFPARSQRAGKLLCVVACAIALVSSLMMFATGQPLARAEAVCSGGDWSDLTWKDEHSNPSLRDNTYHGPGSHAEVQFEWKAKADAKQGDKITFTLPPQLQGVDTGSILLQDSKNELVARGSWDSGRKSFVITLEQFANTHFNVQGTAFVSVKWNRDGINGDPKKFDGSLSFNGCGHGSLGGKYEEGSEGDSHETSKIGEYRGYDSENKVHKVQWTVGLSGKTGNGQRVLVTDNAPDGWRFACDGKYNDGYAPVYVASFIKGDPSGERRHQIFNAQNQDTGGIREGLSGVKNLENFVQGYSYRLRCSSDRVEVEFPYGISPNSSPLISLLTISTEKPALGSTIYNTAEVNGKNISGSVTFPSAGGQGRGSKGGFTIEKIVSGEHTSKQFSFEWLCTSQSKETKSGTIKLANGDVHHEKQLDKGASCVIKEEDADAASEKKHSLKWSVDGEDKEGESVTISIRQPEEQAVQVVATNIYYQEEPEIPPAPPTTTSSSSPSTTTSTETTTKTTTTTTTATKTTEPSATPTTSAPPSSPRTTEPTRTPRNPLLPIPIPIPIPLPPAPPVTTTVTPHAPAPVPPPATPSIASSKPVDAAPQPPAKRLLARTGASVAGLVIPALFLMIGGMGLLMIIRRKRNSE
>NZ_CP009583.1|WP_029975398.1|19090_19831_+|rhomboid-family-intramembrane-serine-protease
MSAQRTVRAAYNQAPATVILSLSTLIIFLITAVQSRSITDNLYDSWLGDHWILYTPQMHDPLGMLRAIGSMFLHIGPAHLAINLFLLFFLGREVEQFTGSAFFSAAYFISGLGASLTIMILDPLSPTAGASGAIYGLMAIMVAIAITRKTDIRAPLILVAVNVGYSLITDNVSLWGHIGGLIAGAIVALPLMAAHRSHSASGGFLAYAAPRNHRNSPRGHLITWLLVAAIAACEVIGIWVVGTRLL
>NZ_CP009583.1|WP_014525079.1|18470_19007_+|peptidylprolyl-isomerase
MMVRMTLKTATAILHTNRGDVAIELFGNHAPKTVENFVTLADGSADYKTENASGTAEGPFYDGAVFHRVIDGFMIQGGDPTGTGRGGPGYMFADEFHPELQFDRPFLLAMANAGPGTNGSQFFITVVPTPHLNNHHTIFGEVTDPASQKVVMDIAQTATDRMDRPVEPVVIESVEITE
>NZ_CP009583.1|WP_029975400.1|17689_18394_-|hypothetical-protein
MNSSTIRGAVLVTKAAYDKYASYRDRKTREAYDALLNAADSYDDVRKEVKSNVTDLYDQSQERVSSLTAQARKRLDSAIADAAAAKDDTVKTVNKKASKASKSLSKQSKKAQKAARKAAQSAKKSATPKKQPSFGKRLFNFSLFTTLLAAVGAVVYYFLSKRDVVSTEPPRVEDFGADSVNTQESRLVYSTHTPVDGEEEHVASPEEGATERDEELLGSLENQLKQHTDSQEDK
>NZ_CP009583.1|WP_013910439.1|28743_29115_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MFAVIQGHNLPNHLNGYLSRFLSEVDAGLYVGVLSRAVMENLWEKCQSVDLAGSLTLIHPQYDAEQGFRIRTTGKQRRPVVDLDGLFLSARGLIEDVRFADPLDEADAIIPDEVLEDFCPESE
>NZ_CP009583.1|WP_013910440.1|29115_30069_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MSYSNEALAFSTIPASEQIRLEDRVSFLYLEYCLIRQDRTGVIAVSRGDEKAPAELKDLPIKARIQLPVGGLAVLMLGPGTSISQPAATSCARAGVSVLFTGGGGVQAYSLSTPLTSSARWAIAQARLASNEAKQRTAARILYKRQLGIEEIEADSIAVMRGIEGRTIRNLYKRLSAQHKIKNFKRDTNATDPVNTNLNLGNSILYGCAASACAALGINPALGIIHRGDIRSLLFDLADLYKPTLTIPAAFKCADNDDDGSEFRRLVRSEIVNQDLLKNMIHIMMEILTPHLPERTDDRLIGGRNHEVPGHTQYGGK
>NZ_CP009583.1|WP_038621190.1|30065_32759_-|CRISPR-associated-helicase/endonuclease-Cas3
MTNAVANHHVLWAKFDNVSEPYPLLAHLLDTATAATCLFNHWLRKGLRDRLSTELGPDAEKILGFVAGIHDLGKANPYFQAQRRNKKEEWITLRDAIQKAGFPLSNGTSALFEETKEKRRHENITLSILGWEITKFLQVKDVWPQLAIIGHHGNFSAPGFLSDEDDLEDIEDIFDDNGWSPTHELLVSSLLQAVGLEKQPEIKHISPASAILISGLVVLADRIASQSEMASGGLQALQKKELFFHQPEKWIANRKAFCREIIENTVGTYHPWESEAAGIRAVLGDYEPRFTQKAALNAGDGLFNVMETTGAGKTEAALLRHVKRKERLLFFLPTQATTNAIMDRIGKIFDGTPNVASLAHGLAVTEDFYAHPIVPVQGSSDDANYKDNGGLYPTEFVRSAGTPRLLAPVCVGTIDQALMGALPSKFNHLRLLALANAHVVVDEVHTMDQYQSELMSGLLEWWSATDTPVTLLTATMPAWQREKFHLSYTGKEPHFKGVFPSLEDWSTPSKNTETSQENIPTEAFTIPIRIDKIAHNEIVDSHVQWVIEQRKLFPQARIGIICNTVGRAQSIAEALAHESPIVLHSRMTAGHRKEAATKLEQAIGKKGTATATLVIGTQAIEASLDIDLDLLRTELCPAPSLIQRAGRLWRRLDPQREVRVPGMVGKKLTIVVMDSPSTGQTLPYLRSQLYRVESWLTQRDRIEFPADIQDFIDATTPGLQELFQKVSLPEDCGSAEEREALANDYLDEVASCVTKQRQAGTSRIDFAKHGKPRQVLASDCVVEDFLQITSANNLEESATRLIDYPSISAILCDPTGTIPGAWTDSVEKLIAISAKDSESLRRALRASISIPHSKKFLPITSREIPLSEAKTLLSGYSAVHIQPEEYDLQSGLKGPQK
>NZ_CP009583.1|WP_029975040.1|32779_33490_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MPNTIYWTHFPAHIALNKSLVLGDSAAQDSKNKPRWDVDDPVFRHRAVMALFPKHQSDNARTDSNILFRLEILPGQEPYFFVQSSIEPSNRNLDNHIKIRQVDLVSPEAGTPIEFRLSINAVRRKTIDATENTKRKIKTTCLSLKALDSDPTETAAGQWVKEKLSPALENIDIVRHGRQVLGANRNGEKTSNRTVQVDTIDGFAHVKDPAELQKILIHGIGRAKSYGCGMLTFRPI
>NZ_CP009583.1|WP_029975041.1|33705_35319_+|type-I-E-CRISPR-associated-protein-Cse1/CasA
MKSNVFKDFPFVKTNKGPMTVEEFFHSSHEESLHLDLSIPGYEYGAIWRLLASLTAVIVQRDPSLLEEVESGSELSLDPEFISQILDDLGSKISLTEGKNLFFQRPLLEGENPKDTARYVGPGKDPAWKLSPTAPSEKSQIYWNLEKLKPESLEAVDAIVALMVFSMYSFTGNSKYDGAKCLNGSPGIRFLGGGNTATEFIIESKTPLLSLLKSIPLEWCEPGGLPAWLDRTGAESRKPNGEMHPLWRATWSSNTAACCWDGETLIGVGIGGIPPEWYALEMGSKPEARKEWWDQRNTEDPFYFYQPDKGGALKAKRLDLSRDLTELAVEWVAEDLSTALAERVRGRALRVDFKKEDSLLFIRHQIGGNASSAMIRESVVSQARKQQWVFDPTGALQKQVRGKADFILSLRNIVLSPFRRENKSDRDRGRRVLDNLASERPKMNETFWREIAPIYEEFILYFTEQVSGDETRKEVRAQAKKTLKELEKDAVRTAQKAFDMVLEPYLLQNPSQAYEVRRRIHSYLASTIAEANEGDQK
>NZ_CP009583.1|WP_014525095.1|35315_35909_+|type-I-E-CRISPR-associated-protein-Cse2/CasB
MTTNRPKQPWTPLVAEFAQRKKDKEFRAKRSALRAGSGIYTEFRAYSYVLPFLGEKASEAQRTALLRCMAALAEYPDIVSSGEKATASSVGQWVNRVAFDGKQGQSEPDSMVASRIKYLHTQDLEEAISSLRRIMAFADRKNMAIKLNPYQFVELFWYWGNGFTDASTKHRLSVLRDFYSTKQEENTDPQSSSEGEK
>NZ_CP009583.1|WP_013910445.1|35908_36976_+|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSRHLTIHVVASVPYSNLNRDDSGTPKNVRRGGVTCALLSSQSIKKGIRTKYEDASLDTSVRSGRIADDVLERAKVLAPEADTKALEKAVKKIIGTLTKVAEANESEGESDRSIWLSAEELEAAAVSVVEQAEKKDFIEDGRTGSLAIAAFGRMFAAAPQKGTEAALSVSPAVTTHGVTIATDYFSTVDDIRERNRDTGATYLGVSQYTTGVFYRTVTIDKEQLRESWTGLDREDAKENLAALVNAIIYGLPRGKQHSTAPFVQPALILAEEQSYRCAYDFESPVQADTREGGYLKPTLEELKRQYDSARAFDADNFGETQVVSGTYPEVSEFFAGAKYADKNGFIDEVVAWIQR
>NZ_CP009583.1|WP_014525096.1|36987_37680_+|type-I-E-CRISPR-associated-protein-Cas5/CasD
MTTTSVYLRLAGPLQSWAGPAVTGNFVRTEPIPTHSALVGLIAGACGYRRDEWPDWLNRLNFRVRVDHPGKFVDDFQTVSAHEEEMLFRERLIYATGKRPSAKTTRLTPDGRGMTSIIQRTYLAEAEFIVEVASDTHGELLRDALRAPKFSTYLGRKAFAPAFPFYLGATTDVDVLHRIPACDLSGAKRDTARVQIHHCSAELHTSAEHINVPAVQERSDWLEKTKVLFA
>NZ_CP009583.1|WP_029975044.1|37756_38791_-|transposase
MASHPYGHHCDICGSDVKKNGKTSAGKTRYRCTGCGASSTATRSGTLHQRQMKAFISWILGGKPRDKSDVSRTQRRLMSWCWQVPVPQPYMEDKACILVMNEGTFFQSWCLVVAYNSTHVLGWQWVRKDDKTTCVQVYTYFPRPCAAVISGDESTAQAIQSLWPGIPMRRCLSSIKESVNQKISHTPHTQPAIEIKNLTDSLSYVYTSEQAQLWLDRYNTWETTWKELLKHRTDSPNTNHNENSCGWQWTYKELRSIRLMYRTLIKKEELFFQFTAPAIPLSDTALPCQTSLLGDDLSADIKKLFHTHRGINHEHARRMVEWYLNSKTESPFIPERIIKHDHWE
>NZ_CP009583.1|WP_029975046.1|39205_40129_+|phospholipase-D
MKKKVVLFLSIIMGILLPVGNAVATPVSHDAASTGNRPVYAIAHRVLTTQGVDDAVAIGANALEIDFTAWRGGWWADHDGIPTSAGATAEAIFKHIAEKRKQGANITFTWLDIKNPDYCTDPDSVCSINALRDLARKYLEPAGVRVLYGFYKTVGGPGWKTITSDLRDKEAIALSGPTHDVLNDFAKAGNKILTKQKIADYGYYDINQGFGDCYGDGNKTCDQLRKSSEARDQGKLGKTFGWTITTGQDDRVNDLLGKAHIDGMIFGFKVTHFYRHADTENSFKAIKKWVDEHSDTHHLATAADNPW

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Crispr_ID: NZ_CP009583_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009583_2

106002-106113

Unclear

Consensus_repeat	Method
ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC	CRISPRCasFinder

1 spacers

cas2,csb3,cas3,csb2gr5,csb1gr7

The CRISPR arrays of NZ_CP009583_2

>merge|NZ_CP009583|2|106002-106113|CRISPRCasFinder
ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGACTCGTCCCAGAGTTGTTCTGCGAGGTCGAGTTTGAGTTCGTACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC

>NZ_CP009583|2|2|106002-106113|CRISPRCasFinder
ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC	TCGTCCCAGAGTTGTTCTGCGAGGTCGAGTTTGAGTTCGT
ACCTCAATGAAAGGCTGCGACCGAAGCCGCAGCGAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009583.1\|WP_038621278.1\|107676_108708_-\|CRISPR-associated-protein	csb3	cd09764_csb3_CAS-I-U	gnl\|CDD\|187733
NZ_CP009583.1\|WP_038621260.1\|94503_97794_+\|1,4-alpha-glucan-branching-protein	unknown	unknown	gnl\|CDD\|200478
NZ_CP009583.1\|WP_038621288.1\|115792_116380_+\|dehydrogenase	unknown	unknown	gnl\|CDD\|380327
NZ_CP009583.1\|WP_013910508.1\|103703_104315_-\|PIN-domain-containing-protein	unknown	unknown	gnl\|CDD\|379205
NZ_CP009583.1\|WP_038621263.1\|98071_99208_+\|hydrolase	unknown	unknown	gnl\|CDD\|119373
NZ_CP009583.1\|WP_038621282.1\|111386_112964_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	csb2gr5	cls000315_csb2gr5_CAS-I-U	gnl\|CDD\|274005
NZ_CP009583.1\|WP_038621285.1\|114892_115699_-\|triacylglycerol-lipase	unknown	unknown	gnl\|CDD\|224001
NZ_CP009583.1\|WP_038622661.1\|101510_102083_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP009583.1\|WP_038621291.1\|116458_117016_+\|gamma-carbonic-anhydrase-family-protein	unknown	unknown	gnl\|CDD\|100051
NZ_CP009583.1\|WP_038621272.1\|102180_103689_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_CP009583.1\|WP_038622664.1\|104342_104750_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|200128
NZ_CP009583.1\|WP_031269835.1\|105141_105399_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009583.1\|WP_038621269.1\|100583_101339_-\|VIT-family-protein	unknown	unknown	gnl\|CDD\|153123
NZ_CP009583.1\|WP_038621294.1\|117018_118026_-\|ROK-family-protein	unknown	unknown	gnl\|CDD\|224851
NZ_CP009583.1\|WP_038621266.1\|99265_100351_-\|inositol-3-phosphate-synthase	unknown	unknown	gnl\|CDD\|132491
NZ_CP009583.1\|WP_029975621.1\|112967_114173_-\|type-I-U-CRISPR-associated-protein-Cas7	csb1gr7	pfam09617_csb1gr7_CAS-I-U	gnl\|CDD\|378223
NZ_CP009583.1\|WP_038621280.1\|108712_111394_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	cas3	cd09696_cas3_CAS-I-U	gnl\|CDD\|274235
NZ_CP009583.1\|WP_014525152.1\|106306_106606_-\|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl\|CDD\|187856
NZ_CP009583.1\|WP_155275485.1\|114558_114810_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009583.1\|WP_080745473.1\|94000_94222_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009583.1\|WP_038621278.1\|107676_108708_-\|CRISPR-associated-protein	gnl\|CDD\|187733	cd09764, Csb3_I-U, CRISPR/Cas system-associated RAMP superfamily protein Csb3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; Might be a catalytically active RNA endoribonuclease.	3.71232e-87
NZ_CP009583.1\|WP_038621260.1\|94503_97794_+\|1,4-alpha-glucan-branching-protein	gnl\|CDD\|200478	cd11339, AmyAc_bac_CMD_like_2, Alpha amylase catalytic domain found in bacterial cyclomaltodextrinases and related proteins. Cyclomaltodextrinase (CDase; EC3.2.1.54), neopullulanase (NPase; EC 3.2.1.135), and maltogenic amylase (MA; EC 3.2.1.133) catalyze the hydrolysis of alpha-(1,4) glycosidic linkages on a number of substrates including cyclomaltodextrins (CDs), pullulan, and starch. These enzymes hydrolyze CDs and starch to maltose and pullulan to panose by cleavage of alpha-1,4 glycosidic bonds whereas alpha-amylases essentially lack activity on CDs and pullulan. They also catalyze transglycosylation of oligosaccharides to the C3-, C4- or C6-hydroxyl groups of various acceptor sugar molecules. Since these proteins are nearly indistinguishable from each other, they are referred to as cyclomaltodextrinases (CMDs). This group of CMDs is bacterial. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	2.27644e-83
NZ_CP009583.1\|WP_038621288.1\|115792_116380_+\|dehydrogenase	gnl\|CDD\|380327	cd03370, nitroreductase, uncharacterized nitroreductase family proteins. Nitroreductase family containing Thermus thermophilus NADH oxidase and other, uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	2.10343e-27
NZ_CP009583.1\|WP_013910508.1\|103703_104315_-\|PIN-domain-containing-protein	gnl\|CDD\|379205	pfam13470, PIN_3, PIN domain. Members of this family of bacterial domains are predicted to be RNases (from similarities to 5'-exonucleases).	4.72345e-05
NZ_CP009583.1\|WP_038621263.1\|98071_99208_+\|hydrolase	gnl\|CDD\|119373	cd00599, GH25_muramidase, Endo-N-acetylmuramidases (muramidases) are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. This family of muramidases contains a glycosyl hydrolase family 25 (GH25) catalytic domain and is found in bacteria, fungi, slime molds, round worms, protozoans and bacteriophages. The bacteriophage members are referred to as endolysins which are involved in lysing the host cell at the end of the replication cycle to allow release of mature phage particles. Endolysins are typically modular enzymes consisting of a catalytically active domain that hydrolyzes the peptidoglycan cell wall and a cell wall-binding domain that anchors the protein to the cell wall. Endolysins generally have narrow substrate specificities with either intra-species or intra-genus bacteriolytic activity.	5.97241e-65
NZ_CP009583.1\|WP_038621282.1\|111386_112964_-\|type-I-U-CRISPR-associated-protein-Cas5/Cas6	gnl\|CDD\|274005	TIGR02165, CRISPR-associated_protein_GSU0054_family, CRISPR-associated protein GSU0054/csb2, Dpsyc system. This model represents a CRISPR-associated protein from the Dpsyc subtype (a type I-C variant), named for Desulfotalea psychrophila LSv54. CRISPR systems confer resistance in prokaryotes to invasive DNA or RNA, including phage and plasmids. CRISPR-associated proteins typically are found near CRISPR repeats and other CRISPR-associated proteins, have low levels of sequence identify, have sequence relationships that suggest lateral transfer, and show some sequence similarity to DNA-active proteins such as helicases and repair proteins.	3.78393e-63
NZ_CP009583.1\|WP_038621285.1\|114892_115699_-\|triacylglycerol-lipase	gnl\|CDD\|224001	COG1075, LipA, Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only].	5.44845e-39
NZ_CP009583.1\|WP_038622661.1\|101510_102083_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.14859e-09
NZ_CP009583.1\|WP_038621291.1\|116458_117016_+\|gamma-carbonic-anhydrase-family-protein	gnl\|CDD\|100051	cd04645, LbH_gamma_CA_like, Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.	1.00228e-71
NZ_CP009583.1\|WP_038621272.1\|102180_103689_+\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.99205e-62
NZ_CP009583.1\|WP_038622664.1\|104342_104750_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|200128	TIGR01764, Probable_excisionase, DNA binding domain, excisionase family. An excisionase, or Xis protein, is a small protein that binds and promotes excisive recombination; it is not enzymatically active. This model represents a number of putative excisionases and related proteins from temperate phage, plasmids, and transposons, as well as DNA binding domains of other proteins, such as a DNA modification methylase. This model identifies mostly small proteins and N-terminal regions of large proteins, but some proteins appear to have two copies. This domain appears similar, in both sequence and predicted secondary structure (PSIPRED) to the MerR family of transcriptional regulators (pfam00376). [Unknown function, General].	1.38411e-06
NZ_CP009583.1\|WP_029975621.1\|112967_114173_-\|type-I-U-CRISPR-associated-protein-Cas7	gnl\|CDD\|378223	pfam09617, Cas_GSU0053, CRISPR-associated protein GSU0053 (Cas_GSU0053). This entry is found in CRISPR-associated (cas) proteins in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (a Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria).	4.83868e-34
NZ_CP009583.1\|WP_038621269.1\|100583_101339_-\|VIT-family-protein	gnl\|CDD\|153123	cd02432, Nodulin-21_like_1, Nodulin-21 and CCC1-related protein family. Nodulin-21_like_1: This is a family of proteins closely related to nodulin-21, a plant nodule-specific protein that may be involved in symbiotic nitrogen fixation. This family is also related to CCC1, a yeast vacuole transmembrane protein that functions as an iron and manganese transporter. .	7.39917e-88
NZ_CP009583.1\|WP_038621266.1\|99265_100351_-\|inositol-3-phosphate-synthase	gnl\|CDD\|132491	TIGR03450, mycothiol_INO1, inositol 1-phosphate synthase, Actinobacterial type. This enzyme, inositol 1-phosphate synthase as found in Actinobacteria, produces an essential precursor for several different products, including mycothiol, which is a glutathione analog, and phosphatidylinositol, which is a phospholipid.	0
NZ_CP009583.1\|WP_038621280.1\|108712_111394_-\|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|274235	TIGR02621, CRISPR-associated_helicase_Cas3, CRISPR-associated helicase Cas3, subtype Dpsyc. This model describes a CRISPR-associated putative DEAH-box helicase, or Cas3, of a subtype found in Actinomyces naeslundii MG1, Geobacter sulfurreducens PCA, Gemmata obscuriglobus UQM 2246, and Desulfotalea psychrophila. This protein includes both DEAH and HD motifs.	1.10231e-83
NZ_CP009583.1\|WP_014525152.1\|106306_106606_-\|CRISPR-associated-endonuclease-Cas2	gnl\|CDD\|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	5.62618e-21
NZ_CP009583.1\|WP_038621294.1\|117018_118026_-\|ROK-family-protein	gnl\|CDD\|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.13123e-08

>NZ_CP009583.1|WP_031269835.1|105141_105399_+|hypothetical-protein
MCAGTGFLPLSAKIRLQEEHFGFFYETVDETFKSLTEGGYGFVRGEAICGPTTSGHDYRISGEIFAGSHHGFGISREVHLPCNVN
>NZ_CP009583.1|WP_038622664.1|104342_104750_-|helix-turn-helix-domain-containing-protein
MTIQTEASLKLTTEDAKILTAFRHQLAGEDPKITSKAGQEAPDQLIDIIRKVLDAVAHGRAISISQLPARITTTTAASMLGVSRPTVMKYIKQGKLSNTMAGSHHRLDTQEVLKLLNDRKEEMRRSVFEVLDLET
>NZ_CP009583.1|WP_013910508.1|103703_104315_-|PIN-domain-containing-protein
MTTAAPNEYTPIPNSVLPDANIWFSTTLHAWIGLLAAETLGSWSFYWTEDILAEAIYHKRREYPKTSSHQIEAIRDRLMTVMAENRITGFAIDESVSYSDTFDAHVHSAAIHGRIQIIVTQDYKDFADLYSNSDDCPYEVFTPDEFLLLVAESAPEAIDAVIEQQFSYYMQKSHSFNLAQKLISAGCPHFAEYVRTRLQALSP
>NZ_CP009583.1|WP_038621272.1|102180_103689_+|DHA2-family-efflux-MFS-transporter-permease-subunit
MTKTSNRWAVLTILMIGVSLIVLDSTIVSVSLPVIITSLDLSLTDAQWVSSLYSVVFAALLLFTGTLGDKFGRVLIFRIGLIVFALASLLAAVSGSAALLILARGLQGVGGAMILPSTLATINTVFRDQERARAFGIWGATMASMAAIGPLLGGWLTQSFSWHWIFLINIPIVIALLIAGHFVFGPDHKGDIVGFDVPGTLLSALALGLTVFGLIEGTSLGWWNSPVPFAIAFGLIATVLFIVLERARRRAGKPVLLDVRLFRIGSFSNGNITALTVALGEFSALFVLPLYLISVLRLGTIHAGWVLATLALGSILSGAAARHLAATFGPAVTVIIGLVLEVVGIAGAGLLIGPATSALLIALVLAIYGAGVGLASAQLASVVLVDVPVESSGMGSATQSTSRQLGSALGVAIAGTVLAVDVVRRVVEGLTNLGMTGPQAAQLAHATADSAGAAIPALAEKMGPDVGSVLSTAFADATSSVLYVSAGVLLLGLISAVRLAKR
>NZ_CP009583.1|WP_038622661.1|101510_102083_-|TetR/AcrR-family-transcriptional-regulator
MENMGSREENREKTQAAILDAAEALLREGGVEALTAGAVAQRVGLARNSLYRYVESMDELRGRVILRHFPDYVDAINQAIHEATTPTEALCAYITTNVQIVAVENHGCLMELAQGVGGEAEANIAHIHHQLIKSLSNLLIPFDLDNPALAAALIQGLLSTGFSALERGHDVQEVTALCVQGALGIVGKPR
>NZ_CP009583.1|WP_038621269.1|100583_101339_-|VIT-family-protein
MTFPDFTAAQPETHAQPETHKESSNRLNSRLNWLRAGVLGANDGIVSVSALILGVIATGVGHGAILASGIAATVAGAISMALGEFVSVSAQRDSERMVMERERLELLHTPEEERHEIAKILSDYGMSEETALRAATEIGHNDPFPAHLRIEYGIDAQDLTSPWHAAFSSAAAFTLGAILPLLMVVIAPQGNSTVGIIAVSSITIIALAVTGYLSAAIAGTSRMRSVLRLVIGGTLGLALTYVAGALFGGVV
>NZ_CP009583.1|WP_038621266.1|99265_100351_-|inositol-3-phosphate-synthase
MSNNRTIRVAIAGVGNCASSLIQGVEYYKDTDPATNVPGLMHVQFGDYHVGDIEFVAAFDVDKEKVGLDLSQAINASENCTIKICDVPEQGVTIQRGPTLDGLGKYYRQTITESDAEPVDVVETLKDVRADVLVSYLPVGSEEADKFYAQCAIDANVAFVNALPVFIASDPEWAEKFEKAGVPIVGDDIKSQVGATITHRVLAKLFEDRGVHLDRTMQLNVGGNMDFKNMLERERLESKKISKTQAVTSNLDQRIEAHDVHIGPSDYVGWLDDRKWAYVRLEGTAFGDVPLNLEYKLEVWDSPNSAGIIIDAIRAAKIAKDRRLGGPVFAASSYLMKSPPQQLRDEHARAELESFIAGDPS
>NZ_CP009583.1|WP_038621263.1|98071_99208_+|hydrolase
MMKTRRLKTALCTVLASSTFAVASVQAIPLPFPIGASSGIDVSGHQHPNGSSINWQDVKSHGQSFAFVKATEGLGWTNAFYASDITQAAAQGLKVGSYHYARPGADARQQARHYAKVISHTPNHSLPPVLDLEVAEGKTPQELVNWTRDFVQELEKQTGRVPMIYTYRYFWIEQMANTTEFSQYPLWLAAYQAQVPGTVGGWDQIDFWQRSSSGRINGIVGDVDMNLFNGDDGELAAFAAGNLHAAGNKFASINLPELADLGKSAGGVVAVILALSAGAAAAPQLIQAAEAAGLSSEGAQDLTAVVQALAKAGKLPVDQLNKMASGNYTVGDLVILLDNAAHLAGIDAGQSSQAVMRADGLNIDANQVARVIRGLAAR
>NZ_CP009583.1|WP_038621260.1|94503_97794_+|1,4-alpha-glucan-branching-protein
MKTYRCHARRIFTALTTLTLITAGGALSRPPAQAADPSSVVIAADFQTKAGCTKDWDPACSQTQMEKQGKFYSKKIKVPKGDWNFKVVLDGDWKTSYGAPGKGYTDDNVPLKLAADAELEFIFDPESHHIGLRPTQITTGDHEVKPEDRELIKAPYRQNAAQNNFYFVLTDRFNNGDPKNDRGDASAEQGDRAQHGFDPTSKAFYHGGDIKGIIQKLDYIQGLGTTAIWLTPSFKNKAVQGTGNDASAGYHGYWITDFTQIDPHLGTNQDMKDLIKAAHEKGMKVYFDIVTNHTADLIQLAGGNGSNGSTYVSQQEQPYKDVNGKEFRLEDYAGKDASEFPKLNKESFPYTPQRTNPAEKMTPDWLNDVTLYHNRGNSMFDDGGESVIMGDFFGLDDLMTEHPTVVDGMIKIYNEWVDYGLDGFRIDTVKHVDLAFWKQWTERVHQHAVEKGMGDFFMFGEAYNFSPEALSPFVRETHMDAVLDFAFQNNAVDFAKGGDTNKLKSLFYGDDWYTTTRSDAAVLPTFLGNHDMGRIGSLLQKSGDGAERLRSDQLAHALLYLTRGQPVVYYGDEQGFAGSGSDKDARQDMFATKVTDVHNEQLVNGDQFGTGDHFKPDAPVAKTITELAKLRKENKALVEGAQIERYATSGAGIYAFSRVNREEKQEYLVALNNATTTREVDLNALTPNAEFERVYASDYVNETRQSLTTDNEAKTHVTVPGLTAVVYKVKNGKQVTGSVSGGLNIVGQELKGDAPIMTTVGGNAWSETNFGWRKLGEKEWNYLGTDTGQDARIFHNVRDLEPGTVVEYRTVTVDGDNKETASHGWGVVGVDLAVDSRALSVSATTASATVPAAVVAGNFTKDLGCTGGQEGNWDPTCAAAELRDDSSGWKTAELTLKPGEYEYKIATGGSWDQSYGALSEGTRESDEGIPDGKNVKFQVTQDKQKVTFFYHPETHEFFNTAEHRVITLPGTMGGALECPANVEKSDEHGNWGPACLATMLTRTGAHTYGTRLPKVPTPGNYEVKVAYDRDWQENYGPDGRSDSNYLVTVAESGKVLRYEWDEQTKKLTWTTSDQGASLVEDSAMPTELEESVTLEN
>NZ_CP009583.1|WP_080745473.1|94000_94222_+|hypothetical-protein
MSNFYKSQTIVRSMAAVIAGCWAYCLVVAPLLSERSYGEVVAEKSKDIGLGFTLAVLLIGVMWLFVARRKSAE
>NZ_CP009583.1|WP_014525152.1|106306_106606_-|CRISPR-associated-endonuclease-Cas2
MRRDDVRRTIIAYDIAHDRRRNKLAKILQKYGDRIQYSVFVVDCSPAKLLRLKDEIKLIISAEEDSVLYCDLGLLSKVDTTFTYEGRKQEITDNEFLII
>NZ_CP009583.1|WP_038621278.1|107676_108708_-|CRISPR-associated-protein
MFTIDIAGDASSALSHFALLGLAAVAEEMGDNSVRLLWSLDSEPKAQLRSIYDPLLIAQRIRELATRWSEDSSWVKARKDYAGKQFAPFSPRIKAIDAEKSPHDWEEHHHIRTSHVDQLLADKRWLDLSFISALGEPSYWHNEKKAPRPDHGASRWEMKTRNRGEEFVQHRLSLMVDELSSWTNEDILAGIQGKQVHDPLGKNSPDSRTSTGLTPPGPTDVALAFVGLLGIASFQLAPQVKEKSVTPGAFPPQALHPVLMVLPMSSTPISLGRARSVLRSEAIACIGGELVRTGDIGTTAVVPASKWLLEHGINAVALFDIKKAGSSSAPERQVQPGSVLPLG
>NZ_CP009583.1|WP_038621280.1|108712_111394_-|type-I-U-CRISPR-associated-helicase/endonuclease-Cas3
MPSITFDAFFAELNDGHRPFAWQQRLVDAVIKTGTWPAQIVAPTGTGKSSVVDVHLYLNALYALGECPRVPRRLSVVVNRRALVDSHIDRAETILCTMQEAKAGSVLATLSQALTSLRSDAHQDPFIVSRLRGALTNKTLPVNSLEACAIIAATPDMWGSRALFRGYGSGRLARPRETALFTMDAVVLLDESHLNRQLLTTARRIAALQELEVDLHVPRLQVVAATATSTETLGLAQSIGVFEEDCERDPVIAQRIDSSKHLSLLKLKKWNGRPKNSEIIATAVEEVLRLCADADSTVGCIVNHVETATKIHRILKKKGLRSEILVGRMRPHDVAQMKARRPGLFTIQGSQEVDVLVATQTMEVGVDVDFAHLVTELAPGSSLTQRFGRVNRLGHRVRSEVSVLVPSTADAIKTDVPPYTSKDLLNSLAWLEQLAEAGTVNPRRLLELPAPEESPGRVLLQRLEWADLHNLCRTTDPLFAEPDLDLWLRDSLEKDPALGGVVVRSPLPEDFNAAVELLNATKPQDFETFPANIAVLNRLKDVLAPTDESFKQKASAVRHRAFLYRDSEVVLLDHDKPLRPTDILIIEPGTPFTTEGVASATPEDSELISPAPLPGIDVHVFDSAMDKAEAESFKQIAAELSEDPEETPTEIQRSKGFQCSTMVLETDHRHGFDAVVPWYITETDDAIRAEEEALQEWSPTSKTVTLQQHQADVAEQADNLCTSVGLHHDFHQIVVQAAAHHDDGKIEPRFQTWLRGGKTSDNQEPWAKSAQRNRQEIRRAKNISGVPPKWRHEQLSALKVAVQLGYDTPETELILRIVGCSHGHGRSTFPYSSWEMISPLATDQEQAVARHLFSEGEWDSIIERTNRTIGPYAMAYLEALQRAADAHVSSEGR
>NZ_CP009583.1|WP_038621282.1|111386_112964_-|type-I-U-CRISPR-associated-protein-Cas5/Cas6
MPKYCLTARFPLGVYLGHTGDANRDAYPDPARLHAALMNAAAQGVHAEEDPNEHQLRPSQQSLQALQWLEAHPPTGLAMPEQQWLSPDTSRMMYRNVGSVKIDKTGVTRATENRAVSDGVSVNGAYGYIWDEMPVDIAEAITALLPDVACLGEASSLVVLEQQEIEATLTLDPQATAFSTERVQVRIALPGRTEHLREVFHARYGKKPPSKKADKFLKDDPIHDPPLPKDHLGTARYLRVNAADKECATPWTKVILLEVHGKQLGPEEQVRAAVALHRALIARIRTDVSPVITGRYAAGAQRPANNLAIQYIPHRHLEALGLKTSAFALLVPQDADSTVYEQLNQALTGPFPLRSGGKLLCQLKYNGHVFRGDAFWPAPQPGTIRMWEPLNVFIPESRPHNKQQGVLWRLADAGLLSVAFVWRDNFPTKETGPARYVELRDAAYNADVRIFHDHPVSRNTRSFVHRTNRSLTIQPWRGLVHLGSLQQDRAIIALGQSRHLGGGLLIPVDIPRSEFETMTSEMTHA
>NZ_CP009583.1|WP_029975621.1|112967_114173_-|type-I-U-CRISPR-associated-protein-Cas7
MGTLSYTDLVKACSAGGSSVLTSITELEAAVGQHGSVAPAKFVNRSEPVFAFEDRFIDGESKRTVLIDSKQSQLNRAEAALVQAINEGNETLNRIPRIEVSYNDSKVFSDLELPHRFTDGHIRAGSIDGKPTTENDLYISARNSTPRNMKPLLNLAPSALIFGGWDASRKSDQVKLRSALVGEIIGVLANQNRAESYSRRGGARVDPVAASVKMTGTDLKETALVQSHELSQKTRSKLDDQVKKAKKGETVSASPLGLGAIPPSLESLGGVACQRIIRSWALSFAALRQLRFGGTAEQDIAARALLAALGLAAMARAESELNIRANCDLVEQGKPVVTLDLRYGEKRELEPISVEAADELLKEAIAKASACGVADWEGQILHVTGNPVVLRGATEDDAEAE
>NZ_CP009583.1|WP_155275485.1|114558_114810_+|hypothetical-protein
METNSIGASEEAYSMLSLAETIYGPGRVPRTASLVDLCSRVVGIGEIVRVRLSRAMPRLSLRMLRQRSGRSLLLRLELSMQRQ
>NZ_CP009583.1|WP_038621285.1|114892_115699_-|triacylglycerol-lipase
MAIIDAPLPLSARLPARGLFEDDWRARPTSRHPYPVILIHGTGVTKGDWMELGTDLRKKGYAVFAPDFGMRSTAAVAESADQVGAYIHAVLKVTGAERVILVGHSQGGILARYWMHHLDGARYVTHLICLAVPNHGTSHGGVISPLTRTARGTVVVDSIITNFFGASGFEMLAESDLIQELNANGDTLPGIYYSCITTKSDTIIQPVESCFLTGPLVRNIYVQAVSKRAIVLHEDVPHDRRVRCIVLSELERVERLIAKKHVRTEHNT
>NZ_CP009583.1|WP_038621288.1|115792_116380_+|dehydrogenase
MSLTVAEAIANRRATRQYTEQEVSDAVLDVVVSQALQAPSAFNAQRADLVVIRDQAIKDKIFAASGQKQLRDAPVVLVTVARADVPEDLDEVLGAERAAFVRNVLAKADAARLRETALKDAMLVAGFALIAAQGEGLATSPTTGWDEAKVLEAIGLAGRSDRAVGLVIGMGYPAEFPAHPGRAESRRVNDGYARD
>NZ_CP009583.1|WP_038621291.1|116458_117016_+|gamma-carbonic-anhydrase-family-protein
MNSGPIILPFNGKTPRVHETAFIAPNTTLIGDVEIAAHASVFYGCVLRADINMIRVGARTNVQDNSVLHVDGDAPCILGEDVTVGHMALVHGSTVGNGTLVGMHSALLSRSVIGAGSLIAAGAVVLEGQEIPAGSLAAGVPAQVRRVLSSEQSAGFIPHAGKYVNVASMHRELGMSLSLDQVRFS
>NZ_CP009583.1|WP_038621294.1|117018_118026_-|ROK-family-protein
MHTRSHLRNTPSFTQPSVPAASCLHLIRHFQPITRSKLVTGSGKSQPTVTRAVAALMEAKLVRERPDLSIPNGPGRPTIPIELSVSPWAQIGVAVGTKTTYVGAYSTRGVVIQEKILDIVPAQMSADQYAETLAIAIREIAELSELPLANVGIATSGHVNSLGLVTAKNLGWEGVDLAGRIYNRISAPVTVASAITAIAGAEQQAQNPDAPANSLIFYADDSIGAALQNPQEVVILPLDENIHGSSSLGASAVALVEQTRPKVIVLAGSAFENSEDALAVGQELRKSPHGTKDKLEIRVIPTHLDNARAAARAIAMDRLIEDPLGLAKRLVTRRR

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Crispr_ID: NZ_CP009583_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009583_3

1906919-1910425

Orphan

I-C,I-E,II-B

Consensus_repeat	Method
GGAACTACCTCCGCATACGCGGAGAAAAG	PILER-CR
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CRISPRCasFinder
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CRT

57 spacers

DinG

The CRISPR arrays of NZ_CP009583_3

>merge|NZ_CP009583|3|1906919-1910425|PILER-CR,CRISPRCasFinder,CRT
CTTTTCTCCGCGTATGCGGAGGTAGTTCCATCATGGAGGCGAGGCTTGACAAGCTTCAGGTCTTTTCTCCGCGTATGCGGAGGTAGTTCTATGCCACAGGGTAGGTTTGATATTCGTGGCGTCTTTTCTCCGCGTATGCGGAGGTAGTTCCCGCACCTATCCACGAAAGGTTGGCAAGCAGAACTTTTCTCCGCGTATGCGGAGGTAGTTCCGTGGTGAGCTATCCGGCTTGGTGGAGCAGGCTCTTTTCTCCGCGTATGCGGAGGTAGTTCCGAGACCTCGCTTTAGATGTCACCGGATCAATACTTTTCTCCGCGTATGCGGAGGTAGTTCCGCTGCGGGTCCGAGCTTCGCGATCACGCGGTCCTTTTCTCCGCGTATGCGGAGGTAGTTCCGACTGGACATGCCCGTCCTGCGGCACACAGTGCTTTTCTCCGCGTATGCGGAGGTAGTTCCATCCAACGTCATCGCCGCCGAAGCATGCCCCACTTTTCTCCGCGTATGCGGAGGTAGTTCCATCCCAGACTCCGAATCCGGTGTTTTATACCCCTTTTCTCCGCGTATGCGGAGGTAGTTCCTTTAATTTTGGGTATGGTGATCCCCGAGCAGCCTTTTCTCCGCGTATGCGGAGGTAGTTCCGGGGTTTAGCGCTCGATTGTTCGATGAACTCACTTTTCTCCGCGTATGCGGAGGTAGTTCCCCATCACAACCCCCTTTACGTGTGATTACTCAGCTTTTCTCCGCGTATGCGGAGGTAGTTCCACCATCGGTTCGTGTGAGCCATTCGGGGGTGTCTTTTCTCCGCGTATGCGGAGGTAGTTCCGATGTGGACGCGGTATAAATATTGCTCACTCACTTTTCTCCGCGTATGCGGAGGTAGTTCCACGGTGGGAAGCTGTGAGGGTTAGAGTGTTTCCTTTTCTCCGCGTATGCGGAGGTAGTTCCATTGTTTGTAGTCCCTGCCCCACAGCGGTTACCTTTTCTCCGCGTATGCGGAGGTAGTTCCGTGAAATCTTCTGATTTTGAGCTGGTGTATTCCTTTTCTCCGCGTATGCGGAGGTAGTTCCCAAAGGTGCATCCACATGATCACGCGCTCGCTCTTTTCTCCGCGTATGCGGAGGTAGTTCCGTCGCGAATCTGATGCTCGGTTAGCCGCAGTTCTTTTCTCCGCGTATGCGGAGGTAGTTCCGGCCTAGAAGCCGTGGATGTACTCAAAGAATTCTTTTCTCCGCGTATGCGGAGGTAGTTCCTCCGTTGGCTACGATGCTCCCCATGATCGCTTCTTTTCTCCGCGTATGCGGAGGTAGTTCCCTCGGACTCCACAATTTCACTCAGGTATTCGGCTTTTCTCCGCGTATGCGGAGGTAGTTCCCGTCAGTGGTTTATTCATCGTTTCTGCTTTCTCTTTTCTCCGCGTATGCGGAGGTAGTTCCAGTGGATACCGTCGCAGTTGCCGTCACGGAAGCTTTTCTCCGCGTATGCGGAGGTAGTTCCTGCGACGGTATCCACTGTTTCGTCGCCCTCCTCTTTTCTCCGCGTATGCGGAGGTAGTTCCTGGAAGCGATTGGTTATCTCGAACGACTGCAACTTTTCTCCGCGTATGCGGAGGTAGTTCCGGCCTTAGGATTATCAACGGCGAAAATGCGCTCTTTTCTCCGCGTATGCGGAGGTAGTTCCGTACCCAGCGGGTTGCCCTTTGCACTTTCCCACTTTTCTCCGCGTATGCGGAGGTAGTTCCGCTGTGTGTTTTTTGTGAAGGTGGGTGGCATCCTTTTCTCCGCGTATGCGGAGGTAGTTCCTGAAGGAGCGCGATGTTCTTATTTCAAAGCTGCTTTTCTCCGCGTATGCGGAGGTAGTTCCGCAAAAGCGGCTCAAGGCTCAGCTGATCAAGCCTTTTCTCCGCGTATGCGGAGGTAGTTCCGTGTCATAAGCAGAAGACGCCCCACCAATGAGCTTTTCTCCGCGTATGCGGAGGTAGTTCCTTTTTCCGAGGGCATTAAAGAGCTGGCGGAAACTTTTCTCCGCGTATGCGGAGGTAGTTCCGCTAAAAGCTCAGCCCCGCTTTTCCGAATCCCCTTTTCTCCGCGTATGCGGAGGTAGTTCCAAAAATTTTCACCCAATCAGGTCCGCGTGTCACTTTTCTCCGCGTATGCGGAGGTAGTTCCACGGGGGCTTCTGCGACGGATAAGCTGAAAGCCTTTTCTCCGCGTATGCGGAGGTAGTTCCATCCTCCTATCACCAAAAATAGGAGGGATCCACTTTTCTCCGCGTATGCGGAGGTAGTTCCACGGTCCGTGGGTCGATTGACATCCACAACAACTTTTCTCCGCGTATGCGGAGGTAGTTCCCTGCGACCACCACGACTGTGACCCGTTTTTAGCTTTTCTCCGCGTATGCGGAGGTAGTTCCGCGTGGTGGATTCATTTTCACGCCGCGCTATGCTTTTCTCCGCGTATGCGGAGGTAGTTCCTGGCTGCTCACTGACGAAATAGGTCATGTATGCTTTTCTCCGCGTATGCGGAGGTAGTTCCGATATGGTCGAGGTGGAGTGCACGTCATTGTCCTTTTCTCCGCGTATGCGGAGGTAGTTCCAAGACTGCTTGATCATGCTCTACTGCCGCTGCCTTTTCTCCGCGTATGCGGAGGTAGTTCCAGCTTGTTGGAAAGAAGACTGCGCACCTTGAACTTTTCTCCGCGTATGCGGAGGTAGTTCCATCCTCAACGGTTTTGAGAACAGTTAGTGGTTCTTTTCTCCGCGTATGCGGAGGTAGTTCCACTTCTGCCTGAATCCAGTAGCCGTACCATTGCTTTTCTCCGCGTATGCGGAGGTAGTTCCATCAATGGCGATGTGATTGCCTACGACCTCGCTTTTCTCCGCGTATGCGGAGGTAGTTCCCATCATCGTGATGGCAGTGTGGCGTGCAACGTGTTTTTCTCCGCGTATGCGGAGGTAGTTCCGGATCACTAGCGGAAATCCGTGGAATCAGCGACTTTTCTCCGCGTATGCGGAGGTAGTTCCGGGCTAGAACCCGTGCGTCTTGATCCTGATGGCTTTTCTCCGCGTATGCGGAGGTAGTTCTAGCTGTGCCCATAGGCGACAGTAGCGTAGCGGCTTTTCTCAGCGTATGCGGAGGTAGTTCCCAGTTGCGGTCGAAGCCGCTGCAGCGGGCTGGCTTTTCTCCGCGTATGCGGAGGTAGTTCCGCTGGTTTCGGTGTTGCGGCGAATATTGTTGCCTTTTCTCCGCGTATGCGGAGGTAGTTCCCAATCGGCTGGCCTATAGTGTTCAAAACTTCCCTTTTCTCCGCGTATGCGGAGGTAGTTCCAAGCTGGGCAACCCTCGACCCCGCTGGAAGCACTTTTCTCCGCGTATGCGGAGGTAGTTCCATCATTGCCCAGCTCACGAGCACGCTCGGCGGCTTTTCTCCGCGCATGCGGAGGTAGTTCCGATACGCTTAGACATAACACCGGCGGCATCAGCTTTTCTCCGCGTATGCGGAAAGTAAGCC

>NZ_CP009583|3|2|1906919-1910364|PILER-CR
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCATGGAGGCGAGGCTTGACAAGCTTCAGGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCT	ATGCCACAGGGTAGGTTTGATATTCGTGGCGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CGCACCTATCCACGAAAGGTTGGCAAGCAGAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGGTGAGCTATCCGGCTTGGTGGAGCAGGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GAGACCTCGCTTTAGATGTCACCGGATCAATA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGCGGGTCCGAGCTTCGCGATCACGCGGTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GACTGGACATGCCCGTCCTGCGGCACACAGTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCAACGTCATCGCCGCCGAAGCATGCCCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCCAGACTCCGAATCCGGTGTTTTATACCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TTTAATTTTGGGTATGGTGATCCCCGAGCAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGGGTTTAGCGCTCGATTGTTCGATGAACTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CCATCACAACCCCCTTTACGTGTGATTACTCAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACCATCGGTTCGTGTGAGCCATTCGGGGGTGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GATGTGGACGCGGTATAAATATTGCTCACTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGTGGGAAGCTGTGAGGGTTAGAGTGTTTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATTGTTTGTAGTCCCTGCCCCACAGCGGTTAC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGAAATCTTCTGATTTTGAGCTGGTGTATTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CAAAGGTGCATCCACATGATCACGCGCTCGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTCGCGAATCTGATGCTCGGTTAGCCGCAGTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGCCTAGAAGCCGTGGATGTACTCAAAGAATT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TCCGTTGGCTACGATGCTCCCCATGATCGCTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CTCGGACTCCACAATTTCACTCAGGTATTCGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CGTCAGTGGTTTATTCATCGTTTCTGCTTTCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AGTGGATACCGTCGCAGTTGCCGTCACGGAAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGCGACGGTATCCACTGTTTCGTCGCCCTCCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGGAAGCGATTGGTTATCTCGAACGACTGCAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGCCTTAGGATTATCAACGGCGAAAATGCGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTACCCAGCGGGTTGCCCTTTGCACTTTCCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGTGTGTTTTTTGTGAAGGTGGGTGGCATC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGAAGGAGCGCGATGTTCTTATTTCAAAGCTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCAAAAGCGGCTCAAGGCTCAGCTGATCAAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGTCATAAGCAGAAGACGCCCCACCAATGAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TTTTTCCGAGGGCATTAAAGAGCTGGCGGAAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTAAAAGCTCAGCCCCGCTTTTCCGAATCCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAAAATTTTCACCCAATCAGGTCCGCGTGTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGGGGCTTCTGCGACGGATAAGCTGAAAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCTCCTATCACCAAAAATAGGAGGGATCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGTCCGTGGGTCGATTGACATCCACAACAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CTGCGACCACCACGACTGTGACCCGTTTTTAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCGTGGTGGATTCATTTTCACGCCGCGCTATG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGGCTGCTCACTGACGAAATAGGTCATGTATG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GATATGGTCGAGGTGGAGTGCACGTCATTGTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAGACTGCTTGATCATGCTCTACTGCCGCTGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AGCTTGTTGGAAAGAAGACTGCGCACCTTGAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCTCAACGGTTTTGAGAACAGTTAGTGGTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACTTCTGCCTGAATCCAGTAGCCGTACCATTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCAATGGCGATGTGATTGCCTACGACCTCG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CATCATCGTGATGGCAGTGTGGCGTGCAACGTG
TTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGATCACTAGCGGAAATCCGTGGAATCAGCGA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGGCTAGAACCCGTGCGTCTTGATCCTGATGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCT	AGCTGTGCCCATAGGCGACAGTAGCGTAGCGG
CTTTTCTCAGCGTATGCGGAGGTAGTTCC	CAGTTGCGGTCGAAGCCGCTGCAGCGGGCTGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGGTTTCGGTGTTGCGGCGAATATTGTTGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CAATCGGCTGGCCTATAGTGTTCAAAACTTCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAGCTGGGCAACCCTCGACCCCGCTGGAAGCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCATTGCCCAGCTCACGAGCACGCTCGGCGG
CTTTTCTCCGCGCATGCGGAGGTAGTTCC

>NZ_CP009583|3|3|1906919-1910425|CRISPRCasFinder
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCATGGAGGCGAGGCTTGACAAGCTTCAGGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCT	ATGCCACAGGGTAGGTTTGATATTCGTGGCGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CGCACCTATCCACGAAAGGTTGGCAAGCAGAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGGTGAGCTATCCGGCTTGGTGGAGCAGGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GAGACCTCGCTTTAGATGTCACCGGATCAATA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGCGGGTCCGAGCTTCGCGATCACGCGGTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GACTGGACATGCCCGTCCTGCGGCACACAGTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCAACGTCATCGCCGCCGAAGCATGCCCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCCAGACTCCGAATCCGGTGTTTTATACCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TTTAATTTTGGGTATGGTGATCCCCGAGCAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGGGTTTAGCGCTCGATTGTTCGATGAACTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CCATCACAACCCCCTTTACGTGTGATTACTCAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACCATCGGTTCGTGTGAGCCATTCGGGGGTGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GATGTGGACGCGGTATAAATATTGCTCACTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGTGGGAAGCTGTGAGGGTTAGAGTGTTTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATTGTTTGTAGTCCCTGCCCCACAGCGGTTAC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGAAATCTTCTGATTTTGAGCTGGTGTATTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CAAAGGTGCATCCACATGATCACGCGCTCGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTCGCGAATCTGATGCTCGGTTAGCCGCAGTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGCCTAGAAGCCGTGGATGTACTCAAAGAATT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TCCGTTGGCTACGATGCTCCCCATGATCGCTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CTCGGACTCCACAATTTCACTCAGGTATTCGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CGTCAGTGGTTTATTCATCGTTTCTGCTTTCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AGTGGATACCGTCGCAGTTGCCGTCACGGAAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGCGACGGTATCCACTGTTTCGTCGCCCTCCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGGAAGCGATTGGTTATCTCGAACGACTGCAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGCCTTAGGATTATCAACGGCGAAAATGCGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTACCCAGCGGGTTGCCCTTTGCACTTTCCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGTGTGTTTTTTGTGAAGGTGGGTGGCATC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGAAGGAGCGCGATGTTCTTATTTCAAAGCTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCAAAAGCGGCTCAAGGCTCAGCTGATCAAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGTCATAAGCAGAAGACGCCCCACCAATGAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TTTTTCCGAGGGCATTAAAGAGCTGGCGGAAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTAAAAGCTCAGCCCCGCTTTTCCGAATCCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAAAATTTTCACCCAATCAGGTCCGCGTGTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGGGGCTTCTGCGACGGATAAGCTGAAAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCTCCTATCACCAAAAATAGGAGGGATCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGTCCGTGGGTCGATTGACATCCACAACAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CTGCGACCACCACGACTGTGACCCGTTTTTAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCGTGGTGGATTCATTTTCACGCCGCGCTATG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGGCTGCTCACTGACGAAATAGGTCATGTATG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GATATGGTCGAGGTGGAGTGCACGTCATTGTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAGACTGCTTGATCATGCTCTACTGCCGCTGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AGCTTGTTGGAAAGAAGACTGCGCACCTTGAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCTCAACGGTTTTGAGAACAGTTAGTGGTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACTTCTGCCTGAATCCAGTAGCCGTACCATTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCAATGGCGATGTGATTGCCTACGACCTCG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CATCATCGTGATGGCAGTGTGGCGTGCAACGTG
TTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGATCACTAGCGGAAATCCGTGGAATCAGCGA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGGCTAGAACCCGTGCGTCTTGATCCTGATGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCT	AGCTGTGCCCATAGGCGACAGTAGCGTAGCGG
CTTTTCTCAGCGTATGCGGAGGTAGTTCC	CAGTTGCGGTCGAAGCCGCTGCAGCGGGCTGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGGTTTCGGTGTTGCGGCGAATATTGTTGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CAATCGGCTGGCCTATAGTGTTCAAAACTTCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAGCTGGGCAACCCTCGACCCCGCTGGAAGCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCATTGCCCAGCTCACGAGCACGCTCGGCGG
CTTTTCTCCGCGCATGCGGAGGTAGTTCC	GATACGCTTAGACATAACACCGGCGGCATCAG
CTTTTCTCCGCGTATGCGGAAAGTAAGCC

>NZ_CP009583|3|2|1906919-1910425|CRT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCATGGAGGCGAGGCTTGACAAGCTTCAGGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCT	ATGCCACAGGGTAGGTTTGATATTCGTGGCGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CGCACCTATCCACGAAAGGTTGGCAAGCAGAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGGTGAGCTATCCGGCTTGGTGGAGCAGGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GAGACCTCGCTTTAGATGTCACCGGATCAATA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGCGGGTCCGAGCTTCGCGATCACGCGGTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GACTGGACATGCCCGTCCTGCGGCACACAGTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCAACGTCATCGCCGCCGAAGCATGCCCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCCAGACTCCGAATCCGGTGTTTTATACCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TTTAATTTTGGGTATGGTGATCCCCGAGCAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGGGTTTAGCGCTCGATTGTTCGATGAACTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CCATCACAACCCCCTTTACGTGTGATTACTCAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACCATCGGTTCGTGTGAGCCATTCGGGGGTGT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GATGTGGACGCGGTATAAATATTGCTCACTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGTGGGAAGCTGTGAGGGTTAGAGTGTTTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATTGTTTGTAGTCCCTGCCCCACAGCGGTTAC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGAAATCTTCTGATTTTGAGCTGGTGTATTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CAAAGGTGCATCCACATGATCACGCGCTCGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTCGCGAATCTGATGCTCGGTTAGCCGCAGTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGCCTAGAAGCCGTGGATGTACTCAAAGAATT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TCCGTTGGCTACGATGCTCCCCATGATCGCTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CTCGGACTCCACAATTTCACTCAGGTATTCGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CGTCAGTGGTTTATTCATCGTTTCTGCTTTCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AGTGGATACCGTCGCAGTTGCCGTCACGGAAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGCGACGGTATCCACTGTTTCGTCGCCCTCCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGGAAGCGATTGGTTATCTCGAACGACTGCAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGCCTTAGGATTATCAACGGCGAAAATGCGCT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTACCCAGCGGGTTGCCCTTTGCACTTTCCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGTGTGTTTTTTGTGAAGGTGGGTGGCATC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGAAGGAGCGCGATGTTCTTATTTCAAAGCTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCAAAAGCGGCTCAAGGCTCAGCTGATCAAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GTGTCATAAGCAGAAGACGCCCCACCAATGAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TTTTTCCGAGGGCATTAAAGAGCTGGCGGAAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTAAAAGCTCAGCCCCGCTTTTCCGAATCCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAAAATTTTCACCCAATCAGGTCCGCGTGTCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGGGGCTTCTGCGACGGATAAGCTGAAAGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCTCCTATCACCAAAAATAGGAGGGATCCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACGGTCCGTGGGTCGATTGACATCCACAACAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CTGCGACCACCACGACTGTGACCCGTTTTTAG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCGTGGTGGATTCATTTTCACGCCGCGCTATG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	TGGCTGCTCACTGACGAAATAGGTCATGTATG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GATATGGTCGAGGTGGAGTGCACGTCATTGTC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAGACTGCTTGATCATGCTCTACTGCCGCTGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AGCTTGTTGGAAAGAAGACTGCGCACCTTGAA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCCTCAACGGTTTTGAGAACAGTTAGTGGTT
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ACTTCTGCCTGAATCCAGTAGCCGTACCATTG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCAATGGCGATGTGATTGCCTACGACCTCG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CATCATCGTGATGGCAGTGTGGCGTGCAACGTG
TTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGATCACTAGCGGAAATCCGTGGAATCAGCGA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GGGCTAGAACCCGTGCGTCTTGATCCTGATGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCT	AGCTGTGCCCATAGGCGACAGTAGCGTAGCGG
CTTTTCTCAGCGTATGCGGAGGTAGTTCC	CAGTTGCGGTCGAAGCCGCTGCAGCGGGCTGG
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	GCTGGTTTCGGTGTTGCGGCGAATATTGTTGC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	CAATCGGCTGGCCTATAGTGTTCAAAACTTCC
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	AAGCTGGGCAACCCTCGACCCCGCTGGAAGCA
CTTTTCTCCGCGTATGCGGAGGTAGTTCC	ATCATTGCCCAGCTCACGAGCACGCTCGGCGG
CTTTTCTCCGCGCATGCGGAGGTAGTTCC	GATACGCTTAGACATAACACCGGCGGCATCAG
CTTTTCTCCGCGTATGCGGAAAGTAAGCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009583.1\|WP_013912192.1\|1911935_1913657_-\|cytochrome-c-oxidase-subunit-I	unknown	unknown	gnl\|CDD\|238832
NZ_CP009583.1\|WP_029975684.1\|1911449_1911794_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009583.1\|WP_014526162.1\|1901427_1902783_+\|nicotinate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|236426
NZ_CP009583.1\|WP_014836727.1\|1915552_1916038_+\|ferritin	unknown	unknown	gnl\|CDD\|153113
NZ_CP009583.1\|WP_013912190.1\|1910580_1910883_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|377122
NZ_CP009583.1\|WP_013912196.1\|1916104_1918264_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|236179
NZ_CP009583.1\|WP_029974823.1\|1896811_1897546_-\|ribonuclease-PH	unknown	unknown	gnl\|CDD\|178914
NZ_CP009583.1\|WP_029975681.1\|1920043_1920874_+\|ammonia-dependent-NAD(+)-synthetase	unknown	unknown	gnl\|CDD\|234831
NZ_CP009583.1\|WP_003852698.1\|1919685_1919808_-\|50S-ribosomal-protein-L36	unknown	unknown	gnl\|CDD\|179138
NZ_CP009583.1\|WP_029974821.1\|1898424_1899318_-\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_CP009583.1\|WP_014526163.1\|1902849_1904814_+\|ATP-dependent-DNA-helicase	DinG	COG1199_DinG_CAS-IV-A	gnl\|CDD\|224120
NZ_CP009583.1\|WP_013912189.1\|1905332_1906610_-\|phosphoserine-phosphatase-SerB	unknown	unknown	gnl\|CDD\|319803
NZ_CP009583.1\|WP_032802901.1\|1900922_1901222_-\|ATP-dependent-Clp-protease-adapter-ClpS	unknown	unknown	gnl\|CDD\|178809
NZ_CP009583.1\|WP_029974815.1\|1904835_1905330_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|379112
NZ_CP009583.1\|WP_013242528.1\|1918978_1919212_-\|glutaredoxin-like-protein-NrdH	unknown	unknown	gnl\|CDD\|131249
NZ_CP009583.1\|WP_013912181.1\|1897584_1898352_-\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293802
NZ_CP009583.1\|WP_013912184.1\|1900288_1900825_-\|DUF2017-domain-containing-protein	unknown	unknown	gnl\|CDD\|378185
NZ_CP009583.1\|WP_029974819.1\|1899384_1900203_-\|rhomboid-family-intramembrane-serine-protease	unknown	unknown	gnl\|CDD\|366759
NZ_CP009583.1\|WP_013912197.1\|1918414_1918852_-\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	unknown	unknown	gnl\|CDD\|179603
NZ_CP009583.1\|WP_013912194.1\|1914124_1915111_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|275027

Protein	Function_ID	Function_description	E-value
NZ_CP009583.1\|WP_013912192.1\|1911935_1913657_-\|cytochrome-c-oxidase-subunit-I	gnl\|CDD\|238832	cd01662, Ubiquinol_Oxidase_I, Ubiquinol oxidase subunit I. Ubiquinol oxidase, the terminal oxidase in the respiratory chains of aerobic bacteria, is a multi-chain transmembrane protein located in the cell membrane. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits in ubiquinol oxidase varies from two to five. Subunit I contains a heme-copper binuclear center (the active site where O2 is reduced to water) formed by a high-spin heme and a copper ion. It also contains a low-spin heme, believed to participate in the transfer of electrons from ubiquinol to the binuclear center. For every reduction of an O2 molecule, eight protons are taken from the inside aqueous compartment and four electrons are taken from ubiquinol on the opposite side of the membrane. The four electrons and four of the protons are used in the reduction of O2; the four remaining protons are pumped across the membrane. This charge separation of four charges contributes to the electrochemical gradient used for ATP synthesis. Two proton channels, the D-pathway and K-pathway, leading to the binuclear center have been identified in subunit I. It is generally believed that the channels contain water molecules that act as 'proton wires' to transfer the protons. A well-defined pathway for the transfer of pumped protons beyond the binuclear center has not been identified. Electrons are believed to be transferred directly from ubiquinol (the electron donor) to the low-spin heme, and directly from the low-spin heme to the binuclear center.	0
NZ_CP009583.1\|WP_014526162.1\|1901427_1902783_+\|nicotinate-phosphoribosyltransferase	gnl\|CDD\|236426	PRK09243, PRK09243, nicotinate phosphoribosyltransferase; Validated.	0
NZ_CP009583.1\|WP_014836727.1\|1915552_1916038_+\|ferritin	gnl\|CDD\|153113	cd01055, Nonheme_Ferritin, nonheme-containing ferritins. Nonheme Ferritin domain, found in archaea and bacteria, is a member of a broad superfamily of ferritin-like diiron-carboxylate proteins. The ferritin protein shell is composed of 24 protein subunits arranged in 432 symmetry. Each protein subunit, a four-helix bundle with a fifth short terminal helix, contains a dinuclear ferroxidase center (H type). Unique to this group of proteins is a third metal site in the ferroxidase center. Iron storage involves the uptake of iron (II) at the protein shell, its oxidation by molecular oxygen at the ferroxidase centers, and the movement of iron (III) into the cavity for deposition as ferrihydrite.	9.84725e-59
NZ_CP009583.1\|WP_013912190.1\|1910580_1910883_+\|hypothetical-protein	gnl\|CDD\|377122	pfam03747, ADP_ribosyl_GH, ADP-ribosylglycohydrolase. This family includes enzymes that ADP-ribosylations, for example ADP-ribosylarginine hydrolase EC:3.2.2.19 cleaves ADP-ribose-L-arginine. The family also includes dinitrogenase reductase activating glycohydrolase. Most surprisingly the family also includes jellyfish crystallins, these proteins appear to have lost the presumed active site residues.	0.00172344
NZ_CP009583.1\|WP_013912196.1\|1916104_1918264_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|236179	PRK08188, PRK08188, ribonucleotide-diphosphate reductase subunit alpha; Validated.	0
NZ_CP009583.1\|WP_029974823.1\|1896811_1897546_-\|ribonuclease-PH	gnl\|CDD\|178914	PRK00173, rph, ribonuclease PH; Reviewed.	9.88694e-165
NZ_CP009583.1\|WP_029975681.1\|1920043_1920874_+\|ammonia-dependent-NAD(+)-synthetase	gnl\|CDD\|234831	PRK00768, nadE, ammonia-dependent NAD(+) synthetase.	1.02631e-168
NZ_CP009583.1\|WP_003852698.1\|1919685_1919808_-\|50S-ribosomal-protein-L36	gnl\|CDD\|179138	PRK00831, rpmJ, 50S ribosomal protein L36; Validated.	1.69298e-09
NZ_CP009583.1\|WP_029974821.1\|1898424_1899318_-\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	6.55288e-133
NZ_CP009583.1\|WP_014526163.1\|1902849_1904814_+\|ATP-dependent-DNA-helicase	gnl\|CDD\|224120	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair].	6.39944e-153
NZ_CP009583.1\|WP_013912189.1\|1905332_1906610_-\|phosphoserine-phosphatase-SerB	gnl\|CDD\|319803	cd07500, HAD_PSP, phosphoserine phosphatase (PSP), similar to Methanococcus Jannaschii PSP and Saccharomyces cerevisiae SER2p. This family includes Methanococcus jannaschii PSP, and Saccharomyces cerevisiae phosphoserine phosphatase SER2p, EC 3.1.3.3, which participates in a pathway whereby serine and glycine are synthesized from the glycolytic intermediate 3-phosphoglycerate; phosphoserine phosphatase catalyzes the hydrolysis of phospho-L-serine to L-serine and inorganic phosphate, the third reaction in this pathway. This family belongs to the haloacid dehalogenase-like (HAD) hydrolases, a large superfamily of diverse enzymes that catalyze carbon or phosphoryl group transfer reactions on a range of substrates, using an active site aspartate in nucleophilic catalysis. Members of this superfamily include 2-L-haloalkanoic acid dehalogenase, azetidine hydrolase, phosphonoacetaldehyde hydrolase, phosphoserine phosphatase, phosphomannomutase, P-type ATPases and many others. HAD hydrolases are found in all three kingdoms of life, and most genomes are predicted to contain multiple HAD-like proteins. Members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. HAD hydrolases are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.	2.19553e-94
NZ_CP009583.1\|WP_032802901.1\|1900922_1901222_-\|ATP-dependent-Clp-protease-adapter-ClpS	gnl\|CDD\|178809	PRK00033, clpS, ATP-dependent Clp protease adaptor protein ClpS; Reviewed.	7.46567e-37
NZ_CP009583.1\|WP_029974815.1\|1904835_1905330_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|379112	pfam13302, Acetyltransf_3, Acetyltransferase (GNAT) domain. This domain catalyzes N-acetyltransferase reactions.	2.68164e-28
NZ_CP009583.1\|WP_013242528.1\|1918978_1919212_-\|glutaredoxin-like-protein-NrdH	gnl\|CDD\|131249	TIGR02194, Glutaredoxin-like_protein_NrdH, Glutaredoxin-like protein NrdH. NrdH-redoxin is a representative of a class of small redox proteins that contain a conserved CXXC motif and are characterized by a glutaredoxin-like amino acid sequence and thioredoxin-like activity profile. Unlike other the glutaredoxins to which it is most closely related, NrdH aparrently does not interact with glutathione/glutathione reductase, but rather with thioredoxin reductase to catalyze the reduction of ribonucleotide reductase.	1.51252e-32
NZ_CP009583.1\|WP_013912181.1\|1897584_1898352_-\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293802	cd07716, RNaseZ_short-form-like_MBL-fold, uncharacterized bacterial subgroup of Ribonuclease Z, short form; MBL-fold metallo-hydrolase domain. The tRNA maturase RNase Z (also known as tRNase Z or 3' tRNase) catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors. Two forms of RNase Z exist in eukaryotes, one long (ELAC2) and one short form (ELAC1), the former may have resulted from a duplication of the shorter enzyme. Only the short form exists in bacteria. Members of this bacterial subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions.	8.33346e-76
NZ_CP009583.1\|WP_013912184.1\|1900288_1900825_-\|DUF2017-domain-containing-protein	gnl\|CDD\|378185	pfam09438, DUF2017, Domain of unknown function (DUF2017). This is an alpha-helical domain found in gene neighborhoods that contain genes encoding ubiquitin, cysteine synthases and JAB peptidases.	4.83857e-73
NZ_CP009583.1\|WP_029974819.1\|1899384_1900203_-\|rhomboid-family-intramembrane-serine-protease	gnl\|CDD\|366759	pfam01694, Rhomboid, Rhomboid family. This family contains integral membrane proteins that are related to Drosophila rhomboid protein. Members of this family are found in bacteria and eukaryotes. Rhomboid promotes the cleavage of the membrane-anchored TGF-alpha-like growth factor Spitz, allowing it to activate the Drosophila EGF receptor. Analysis has shown that Rhomboid-1 is an intramembrane serine protease (EC:3.4.21.105). Parasite-encoded rhomboid enzymes are also important for invasion of host cells by Toxoplasma and the malaria parasite.	4.22842e-23
NZ_CP009583.1\|WP_013912197.1\|1918414_1918852_-\|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI	gnl\|CDD\|179603	PRK03600, nrdI, class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI.	1.61162e-75
NZ_CP009583.1\|WP_013912194.1\|1914124_1915111_-\|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta	gnl\|CDD\|275027	TIGR04171, ribonucleotide-diphosphate_reductase_subunit_beta, ribonucleoside-diphosphate reductase, class 1b, beta subunit. Members of this family are NrdF, the beta subunit of class 1b ribonucleotide reductase. This form uses a dimanganese moiety associated with a tyrosine radical to reduce the cellular requirement for iron. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	0

>NZ_CP009583.1|WP_013912189.1|1905332_1906610_-|phosphoserine-phosphatase-SerB
MIELDQPQVTVSLRPELTPAVITISGQDRQGVSAAAFRVLAANGVQILDVEQSQFRGFLGLAVFAGVEAAGVETLEIGLKETLKTYGQSVKIELQEVAQSSRPRSTHEVVILGDPVEAHDLSRIAQTLANFDANIDTIRGISDYPVTGLELKITVANRELGAAMPLRKALAELTTELGVDIAIERAGLLRRSKRLICFDCDSTLITGEVIEMLAAHAGREKEVAEVTERAMRGELDFEESLRERVKALAGLDASVIGEVADSIELTPGARTTIRTLKRLGYKTAVVSGGFIQVLEGLAEDLGLDYVRANTLEIVDGKLTGRVIGKVVDRAAKAEFLEEFARESGIEMHQTVAVGDGANDIDMISAAGLGIAFNAKPALREIADTSVNSPFLDEVVHMLGITRADIDAADDSDGKIRRVPLPQQKN
>NZ_CP009583.1|WP_029974815.1|1904835_1905330_+|GNAT-family-N-acetyltransferase
MAHVPTLSNESIRLRPLVLSDAHDLTATCVDPLTQKYTTIPAGYTLANAEEFITTEHDNLRWVITNRTSDRFCGQIELRPLAGEHNAMDVGYMTAPWSRGQGLMTSALLLAVDYAFSLGIRRIELRTDPQNKASQRVAEKAGFLYQGLHNDFTVYSLLTDDYRS
>NZ_CP009583.1|WP_014526163.1|1902849_1904814_+|ATP-dependent-DNA-helicase
MSDSPLALSTDELLDAAVAALGGSRRNGQVSMANAVTKALESERHLAVQAGTGTGKSLAYLVPALRHAQATDSTIIVSTATIALQRQLVERDLPRLADALEPHMSRRPTFAIMKGRANYVCMNKIAAAEEPEDALIDEEDLSWLGKHVARIYEWANETEVGDRDSLDPGVPDLAWRQVSVSAQECIGASRCPHGEDCFAEIARKKAHDVDVIVTNHALLAIDALSDVNVLPEHEVVIVDEAHELDGRITAVATNEIGVTALTMSSRRAGKLGAGDKDQKLIDISKEWEDAMLAVEPGRLTSLPESLKQQTIALRDAIWSLREHVSRVPEGEAANDPERHAERMSLSNHLGDQHDSVVRILSVFEEEDAASQEDVVWVLHDDRRGVMIKVAPLSIAGLLHARLFSENTVVLASATLNIGGNFNAMAASWGLPKGSWDSLDAGTPFDPAKSGILYTPNSLPDPGRDGLSPEVIDEIYDLIMAAGGRTLGLFSSRRAAQQATEAMRTRLPFDVLCQGDDTTGALVEKFSKQENTCLFGTLSLWQGVDVPGKACSLVIIDRIPFPRPDDPLLQARKDAADAEGRNGFMEVAATHAALLIAQGAGRLLRSVTDRGVVAILDRRIVTKRYGAFFIKSLPAFWRTNDPQVVRGALARLVAK
>NZ_CP009583.1|WP_014526162.1|1901427_1902783_+|nicotinate-phosphoribosyltransferase
MTCASALIVFKAKLVCVTEFESTALLTDMYELTMLQSALADGTAYRNCTFEVFSRRLPNERRYGVVAGTARVLEAIKRYRFTEKQLASLTFLDATTIDFLRSYEFKGQIDGYREGELYFPSSPILTIRGTFAECVILETLILSIMNADSAVASAAARMVTAADGRPIFEMGSRRTHEYAAVTAARAAYLAGFVGTSNLEAVYRYGIPGSGTAAHAWTLLHVNDDGTPNEPAAFQSQINVLGVGTTLLVDTYDIAKGVKTAIEIAGPQLGAVRIDSGDLGVMTRKVRQELDSLGAHNTGIVVSSDLDEYAIAGLRGNPVDAFGVGTSVVTGSGAPTAGMVYKLVEVDGHPVAKRSRGKAMVGGTKRAVRTHRATGTAVEEIVFPYDHETPQIGQLNSYELTIPLMRNGIVVDNLPTLEESRAYLAEQLITLPWEGLALSKDEPVLSTRFIGF
>NZ_CP009583.1|WP_032802901.1|1900922_1901222_-|ATP-dependent-Clp-protease-adapter-ClpS
MSSPMATPELDEDLSVDVASSENLPWMCIVWDDPVNLMSYVTYVFQTILGYSKRRAIELMMQVHTEGKAVVSSGERDKVEGDVKKLHTAGLWATMQQGG
>NZ_CP009583.1|WP_013912184.1|1900288_1900825_-|DUF2017-domain-containing-protein
MQPWKKKKGLMRGAHFVCVFEPMEREVLGNLASTVSEALIHRAQTAPKDELAELTGMPSGHKEAPTDPALARLLPDFEKEGDEEFEGDNSLLRCLHETDITRAKVEHLQVLGQALGPDGGVHVDITEPEAHAWVAALNDIRLYVASGEVFGEEAEQDRDNLVEWLAYNQESLLNAMMG
>NZ_CP009583.1|WP_029974819.1|1899384_1900203_-|rhomboid-family-intramembrane-serine-protease
MELRDFFTRLCFIMTNRFNPYAQSDRNTYGGVSTSGGYLPHEYGAQYLPTPGYSADRVTQRGVNTSSWRSMGRKRLVDATVLALGYVVIIWAVHIVNTVFFGGTLAQGLGVHPLDGASIWHIFTSPLVHGNYMHLSANTLPGLIFVFLIGLSGRRAFWEVTMIAAVVGGMGTWIFGGIGTTHIGASGLIYGWLAYLVVRGIFNRSFSQVLLGMVLAFIYGGLIWGVLPGDVGVSWQAHLFGAIGGLIAGATITSDDPPALKARREQRALERS
>NZ_CP009583.1|WP_029974821.1|1898424_1899318_-|glutamate-racemase
MDYVIQDHKSDSLKTEAPGVEPSIVYEGTIDASSPIGIFDSGVGGLTVARAIMEQLPQESVIYIGDTAHSPYGPKPIAQVRELSMRIGDELVARGCKMIVIACNTATSAALRDLRERYSIPVVGVILPAVRRAVATTRNGKIGVLGTQGTIASGAYQELFAASPGVDVYAQACPSFVSFVERGITSGRQILGVAQGYTEGLQAAGVDTLVLGCTHYPLLTGVIQLAVGDNVTLISSSEECVKDVLKTLSRNDMLADAATDKQPIRSFESTGDPALFEQLAMRFLGPHVTHVEKLREV
>NZ_CP009583.1|WP_013912181.1|1897584_1898352_-|MBL-fold-metallo-hydrolase
MKLTILGSSGSLGAPDNAASGYLIQMDNAPSILMDMGPGVLAQLERVQNPSDAHVVFSHLHADHCVDFPSLLVWRRYHPTAAAKGRNLCFGPTDTPIRMGRLSADSVDNIDDMSDTFAFTPWENAQEELVGAVSITPYSVIHPIETFALRVEHKRSGKIIAYSGDSSYTENLIECARNADVFLCEATWGETSEGKAPNMHMSGAEAGRIARLAGVKRLVLVHIPPWGNAEAALEKARSEYDGPIDISYQGMEINI
>NZ_CP009583.1|WP_029974823.1|1896811_1897546_-|ribonuclease-PH
MTTSNFKRADGRAVDQMRTVKITRGFTTNPAGSVLVEFGNTRVMCTASAEIGVPRFKRDSGEGWLTAEYAMLPAATLDRNPRESMRGKVKGRTHEISRLIGRSLRAAVDLSELGENTINIDCDVLQADGGTRTASITGAYVALADAITHLQKQGVVPGNPLKDPVAAVSVGVIDGTVCLDLPYEEDSRADVDMNVIMQSGRFVEIQGTGEHNTFDRDELARILDFAEKGCAELVEAQKAVLGIA
>NZ_CP009583.1|WP_013912190.1|1910580_1910883_+|hypothetical-protein
MNTYQKIKEKTGGKIYLGVGLQPGNQDEIAIEACYIEALIDYGYLDVELKKEFLKLWLTDDMYDDLSDLDSIELKTYRNLLKYAGMQPRVDTSVFRPEPA
>NZ_CP009583.1|WP_029975684.1|1911449_1911794_+|hypothetical-protein
MHLQTTVTRVLITTTIALSFALASTSTLAHAETKSVPIACQELQADVETWTKKLKEAESSHDQLSKNGHSKDAIKRYLERSQQYFQECVSSPPKHLHFELSSALPMFMSNLSSS
>NZ_CP009583.1|WP_013912192.1|1911935_1913657_-|cytochrome-c-oxidase-subunit-I
MTAVAPRLENYSEPTRPAPTGGARKGTLAWKMLTTTDHKQLGIMYIIMSFVFFFLGGLMALLIRAELFSPGLQYLSNEQFNQLFTMHGTVMLLLFGTPIVWGFANYILPLQIGAPDVAFPRLNAFGFWVTMIGAAAMLSGFLTPGGAADFGWTMYLPLADSIHSPGIGSDMWIVGVGATGVGTISSAINMITTILCMRAPGMTMFRMPIFCWNIFVASVLVLMIFPLLTAAALGVLYDRKLGGHLFDPGNGGAIMWQHLFWFFGHPEVYVLALPFFGIVSEIIPVFARKPMFGYIGLVFATLSIGSLSMAVWAHHMFVTGAILLPFFSFMTFLISVPTGVKFFNWLGTMWKGHVSWETPMTWTMGFLVTFLFGGLTGIMLASPPLDFHISDTYFVVAHFHYTLFGTVVFASFAGVYFWFPKMTGRMLDERLGKIHFWITFVGFHGTFLVQHWLGNEGMPRRYADYLDSDGFTTLNQISTIFSFLLGMSVLPFIWNVIKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTSLPRIRSERPAFELHYPHMVERMRREAHVGHHAEPVTKKTS
>NZ_CP009583.1|WP_013912194.1|1914124_1915111_-|class-1b-ribonucleoside-diphosphate-reductase-subunit-beta
MESYDSYLESHKKPVSAINWNSIPDEKDLEVWDRLTGNFWLPEKVPVSNDLKSWGTLNDLEKTTTMRVFTGLTMLDTIQGTVGAVSMIPDAITPHEEAVYTNIAFMESVHAKSYSNIFMTLASTKEINEAFRWSEENENLQKKAKIVLSYYEGADPLKRKVASTLLESFLFYSGFYLPMYWSSHAKLTNTADIIRLIIRDEAVHGYYIGYKYQQAVRQQTPERQAELKEYTFDLLYDLYDNEIQYTEDLYDDLGWTEDVKRFLRYNANKALNNLGYEGLFPADECKVSPAILSALSPNADENHDFFSGSGSSYVIGKAENTTDDDWDF
>NZ_CP009583.1|WP_014836727.1|1915552_1916038_+|ferritin
MSINEKLAAALNNQITAELEASMVYLQLSYILDDLSLTGMRNWMQAQHKEELDHAAQFSKHLLDRDYRPQIGDIAPPKLDANSAIEAFEASLAHEQKVTAMIRELAEIADSVKDYDSRPLIDRFLEEQIEEEATVKEILDRLRIADTGSGILRIDAELAAR
>NZ_CP009583.1|WP_013912196.1|1916104_1918264_-|class-1b-ribonucleoside-diphosphate-reductase-subunit-alpha
MSQSLGKHVAEPVSRTEQLDYHALNALLNLYNADGKIQFDKDREAANQFFLQHVNQNTVFFHDLEEKIEYLVENNYYEPEIIQQYEFAFIKDLFKQAYAHKFRFKSFLGAYKYYTSYTLKTFDGRRYLERFEDRVCMVALTLADGDQDLARNLVDEIMTGRFQPATPTFLNSGKAQRGEPVSCFLLRIEDNMESIGRSINSALQLSKRGGGVALLLSNLREAGAPIKKIENQSSGVIPVMKLLEDSFSYANQLGARQGAGAVYLNAHHPDILNFLDTKRENADEKIRIKTLSLGVVIPDITFELAKRNDDMYLFSPYDVERVYGKAFADISVSEHYAEMVEDPRIRKSKINAREFFQTIAEIQFESGYPYIMFEDTVNKANPIEGRVNMSNLCSEILQVNTPSLFNDDLTYEEVGEDISCNLGSLNIAMTMDSPDFAKTIETAIRGLTAVSEQTAINSVPSIRKGNDAAHAIGLGQMNLHGYLGREHIYYGSEEGLDFTNAYFAAVLYQCLVASNKLARERGRTFAGFETSKYATGEYFDDFDPADFAPKTEKVAKIFADSSIYTPTVADWADLKDAVAAHGLYNRYLQAVPPTGSISYINHSTSSIHPIASKIEIRKEGKIGRVYYPAPHMDNENLDYFADAYEIGFEKVIDTYAVATKYVDQGLSLTLFFKDSATTRDINRAQIYAWRKGIKTLYYIRLRQVALMGTEVEGCVSCML
>NZ_CP009583.1|WP_013912197.1|1918414_1918852_-|class-Ib-ribonucleoside-diphosphate-reductase-assembly-flavoprotein-NrdI
MLVVYFSSATENTKRFVHKLGFPAKRIPLHKSSPELVVDEPYVLVCPTYGGGASISGGNTRPVPAQVIRFLNNEHNRGLLRAVIAGGNSNFGLDFGKAGDMIAAKCQVPYVYRFELLGTDEDVRLVRDGLLSNAAALGLLPEPVA
>NZ_CP009583.1|WP_013242528.1|1918978_1919212_-|glutaredoxin-like-protein-NrdH
MSITVYTKPACVQCNATKKALDRAGLDYTLVDISIDDEARDYVMALGYLQAPVVEVNGEHWSGFRPERISSLVAQVA
>NZ_CP009583.1|WP_003852698.1|1919685_1919808_-|50S-ribosomal-protein-L36
MKVRKSLRSLKNKPGAQVVRRRGKVYVINKKDPRFKARQG
>NZ_CP009583.1|WP_029975681.1|1920043_1920874_+|ammonia-dependent-NAD(+)-synthetase
MDTLRSTIKHRLRTQSIINPSEEIEKRVDFLAHYLAASGAKGFALGISGGQDSTLAGRLAQLAVEKIRKEGHPADFWAIRLPYGVQADEADAQTALAFIQPDHSVTINIKPATDACAADVAQALGLKELGDFNKGNVKARQRMIAQYALAGEKGLLVIGTDHAAENVTGFFTKFGDGAADILPLAGLSKRQGAQLLQALNAPDSTWLKVPTADLEEDRPALPDEAALGVTYSEIDTYIEGTEAVSKEATARIEHLWKVSEHKRHLPVEPGDTWWRR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP009583_3	3.8\|1907375\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907375-1907406	32	NZ_CP009583.1	2047806-2047837	0	1.0

1. spacer 3.8|1907375|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to position: 2047806-2047837, mismatch: 0, identity: 1.0

atccaacgtcatcgccgccgaagcatgcccca	CRISPR spacer
atccaacgtcatcgccgccgaagcatgcccca	Protospacer
********************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009583_1	1.10\|27872\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27872-27903	32	NZ_CP021236	Pontibacter actiniarum strain DSM 19842 plasmid unnamed, complete sequence	67818-67849	6	0.812
NZ_CP009583_3	3.45\|1909633\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909633-1909664	32	NZ_LN809998	Pseudomonas aeruginosa strain MH19 plasmid pPAMH19, complete sequence	40255-40286	6	0.812
NZ_CP009583_3	3.6\|1907253\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907253-1907284	32	NC_016654	Rhodococcus phage REQ3, complete genome	21901-21932	7	0.781
NZ_CP009583_3	3.7\|1907314\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907314-1907345	32	NZ_CP018466	Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence	32118-32149	7	0.781
NZ_CP009583_3	3.7\|1907314\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907314-1907345	32	NZ_CP020976	Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA	38505-38536	7	0.781
NZ_CP009583_3	3.7\|1907314\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907314-1907345	32	NZ_CP020965	Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence	9445-9476	7	0.781
NZ_CP009583_3	3.7\|1907314\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907314-1907345	32	NZ_CP011162	Xanthomonas citri pv. aurantifolii strain FDC 1559 plasmid pXfc38, complete sequence	2831-2862	7	0.781
NZ_CP009583_3	3.7\|1907314\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907314-1907345	32	NZ_CP011251	Xanthomonas citri pv. aurantifolii strain FDC 1561 plasmid pXfb33, complete sequence	914-945	7	0.781
NZ_CP009583_3	3.7\|1907314\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907314-1907345	32	MN813684	Microbacterium phage Terij, complete genome	45565-45596	7	0.781
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	NZ_CP051728	Escherichia coli strain SCU-111 plasmid pSCU-111-1, complete sequence	97509-97540	7	0.781
NZ_CP009583_3	3.17\|1907925\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907925-1907956	32	NC_015253	Brochothrix phage A9, complete genome	39896-39927	7	0.781
NZ_CP009583_3	3.23\|1908291\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908291-1908322	32	MN850587	Escherichia phage mistaenkt, complete genome	20999-21030	7	0.781
NZ_CP009583_3	3.23\|1908291\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908291-1908322	32	NC_028935	Escherichia phage SUSP2, complete genome	13068-13099	7	0.781
NZ_CP009583_3	3.44\|1909572\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909572-1909603	32	NC_018701	Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence	1071031-1071062	7	0.781
NZ_CP009583_3	3.44\|1909572\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909572-1909603	32	NZ_CP021810	Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence	194926-194957	7	0.781
NZ_CP009583_3	3.44\|1909572\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909572-1909603	32	NZ_CP021218	Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence	1242100-1242131	7	0.781
NZ_CP009583_3	3.45\|1909633\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909633-1909664	32	NZ_CP046903	Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence	186029-186060	7	0.781
NZ_CP009583_3	3.56\|1910304\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1910304-1910335	32	NC_006826	Sphingobium xenophagum QYY plasmid pSx-Qyy, complete sequence	4654-4685	7	0.781
NZ_CP009583_1	1.6\|27628\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27628-27659	32	CP000876	Herpetosiphon aurantiacus DSM 785 plasmid pHAU01, complete sequence	140146-140177	8	0.75
NZ_CP009583_3	3.3\|1907070\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907070-1907101	32	NZ_AP018440	Undibacterium sp. KW1 plasmid pUKW01, complete sequence	111556-111587	8	0.75
NZ_CP009583_3	3.6\|1907253\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907253-1907284	32	NZ_CP032347	Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence	619045-619076	8	0.75
NZ_CP009583_3	3.8\|1907375\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907375-1907406	32	NZ_CP015882	Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence	246101-246132	8	0.75
NZ_CP009583_3	3.8\|1907375\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907375-1907406	32	NZ_CP030264	Ensifer adhaerens strain Corn53 plasmid AB, complete sequence	719533-719564	8	0.75
NZ_CP009583_3	3.20\|1908108\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908108-1908139	32	NC_015951	Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence	271691-271722	8	0.75
NZ_CP009583_3	3.20\|1908108\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908108-1908139	32	NZ_CP045548	Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence	388583-388614	8	0.75
NZ_CP009583_3	3.27\|1908535\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908535-1908566	32	NC_019782	Lactobacillus phage AQ113, complete genome	18673-18704	8	0.75
NZ_CP009583_3	3.43\|1909511\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909511-1909542	32	NZ_LN831184	Vibrio cholerae isolate V. cholerae 116-14 plasmid pNDM-116-14, complete sequence	279373-279404	8	0.75
NZ_CP009583_3	3.45\|1909633\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909633-1909664	32	NZ_CP012102	Bacillus thuringiensis strain HS18-1 plasmid pHS18-3, complete sequence	6220-6251	8	0.75
NZ_CP009583_3	3.51\|1909999\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909999-1910030	32	NZ_LR594669	Variovorax sp. SRS16 plasmid 4	476662-476693	8	0.75
NZ_CP009583_3	3.52\|1910060\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1910060-1910091	32	NZ_AP022319	Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence	41459-41490	8	0.75
NZ_CP009583_3	3.56\|1910304\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1910304-1910335	32	NZ_CP020900	Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence	568297-568328	8	0.75
NZ_CP009583_1	1.3\|27445\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27445-27476	32	NZ_CP032695	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence	5224-5255	9	0.719
NZ_CP009583_1	1.3\|27445\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27445-27476	32	NC_041878	Pectobacterium phage CBB, complete genome	224637-224668	9	0.719
NZ_CP009583_1	1.6\|27628\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27628-27659	32	NZ_LN832560	Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence	133747-133778	9	0.719
NZ_CP009583_1	1.6\|27628\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27628-27659	32	NZ_CP050098	Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence	305919-305950	9	0.719
NZ_CP009583_1	1.6\|27628\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27628-27659	32	NC_019847	Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence	136881-136912	9	0.719
NZ_CP009583_1	1.10\|27872\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27872-27903	32	MN855702	Bacteriophage sp. isolate 300, complete genome	5797-5828	9	0.719
NZ_CP009583_1	1.21\|28543\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	28543-28574	32	NC_019789	Deinococcus peraridilitoris DSM 19664 plasmid pDEIPE01, complete sequence	283373-283404	9	0.719
NZ_CP009583_1	1.21\|28543\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	28543-28574	32	KY653122	Morganella phage IME1369_03, complete genome	8947-8978	9	0.719
NZ_CP009583_3	3.5\|1907192\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907192-1907223	32	MK937597	Gordonia phage Spooky, complete genome	40379-40410	9	0.719
NZ_CP009583_3	3.6\|1907253\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907253-1907284	32	MT708545	Rhizobium phage Pasto, complete genome	24883-24914	9	0.719
NZ_CP009583_3	3.8\|1907375\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907375-1907406	32	NC_008010	Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence	258086-258117	9	0.719
NZ_CP009583_3	3.8\|1907375\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907375-1907406	32	NZ_CP022367	Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence	254572-254603	9	0.719
NZ_CP009583_3	3.20\|1908108\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908108-1908139	32	NZ_CP016366	Phaeobacter porticola strain P97 plasmid pP97_b, complete sequence	52849-52880	9	0.719
NZ_CP009583_3	3.23\|1908291\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908291-1908322	32	CP008937	Candidatus Caedibacter acanthamoebae plasmid Plasmid_00001, complete sequence	134207-134238	9	0.719
NZ_CP009583_3	3.26\|1908474\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908474-1908505	32	NZ_CP054606	Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence	26037-26068	9	0.719
NZ_CP009583_3	3.28\|1908596\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908596-1908627	32	KJ510412	Mycobacterium phage ZoeJ, complete genome	22123-22154	9	0.719
NZ_CP009583_3	3.29\|1908657\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908657-1908688	32	NZ_CP031959	Phaeobacter sp. LSS9 plasmid unnamed3, complete sequence	15952-15983	9	0.719
NZ_CP009583_3	3.29\|1908657\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908657-1908688	32	NZ_CP010597	Phaeobacter inhibens strain P10 plasmid pP10_b, complete sequence	7035-7066	9	0.719
NZ_CP009583_3	3.29\|1908657\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908657-1908688	32	NC_018287	Phaeobacter inhibens DSM 17395 plasmid pPGA1_78, complete sequence	72566-72597	9	0.719
NZ_CP009583_3	3.29\|1908657\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908657-1908688	32	NZ_CP031950	Phaeobacter inhibens strain BS107 plasmid unnamed2, complete sequence	72566-72597	9	0.719
NZ_CP009583_3	3.52\|1910060\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1910060-1910091	32	MN304815	Burkholderiales phage 68_11, complete genome	29121-29152	9	0.719
NZ_CP009583_3	3.54\|1910182\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1910182-1910213	32	MK448905	Streptococcus phage Javan318, complete genome	13299-13330	9	0.719
NZ_CP009583_3	3.55\|1910243\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1910243-1910274	32	NC_020867	Synechococcus phage S-RIP1 genomic sequence	7461-7492	9	0.719
NZ_CP009583_3	3.56\|1910304\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1910304-1910335	32	NZ_CP045339	Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence	1117986-1118017	9	0.719
NZ_CP009583_1	1.6\|27628\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27628-27659	32	CP000662	Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence	254031-254062	10	0.688
NZ_CP009583_1	1.6\|27628\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	27628-27659	32	NZ_CP010864	Marinovum algicola DG 898 plasmid pMaD9, complete sequence	85014-85045	10	0.688
NZ_CP009583_1	1.21\|28543\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	28543-28574	32	NZ_CP028969	Aminobacter sp. MSH1 plasmid pUSP1, complete sequence	63369-63400	10	0.688
NZ_CP009583_1	1.21\|28543\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	28543-28574	32	NZ_CP026266	Aminobacter sp. MSH1 plasmid pAM01, complete sequence	60669-60700	10	0.688
NZ_CP009583_1	1.22\|28604\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	28604-28635	32	NC_019401	Cronobacter phage vB_CsaM_GAP32, complete genome	154621-154652	10	0.688
NZ_CP009583_1	1.23\|28665\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	28665-28696	32	NC_012586	Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence	1181209-1181240	10	0.688
NZ_CP009583_3	3.7\|1907314\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907314-1907345	32	NZ_CP017750	Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence	255122-255153	10	0.688
NZ_CP009583_3	3.7\|1907314\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907314-1907345	32	NZ_CP023738	Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence	273638-273669	10	0.688
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	AP013525	Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7A-MedDCM-OCT-S30-C5	15423-15454	10	0.688
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	AP013526	Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7A-MedDCM-OCT-S33-C3	2364-2395	10	0.688
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	AP013983	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7A-MedDCM-OCT-S35-C5, * SEQUENCING IN PROGRESS *	13863-13894	10	0.688
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	AP013527	Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7A-MedDCM-OCT-S38-C7	24293-24324	10	0.688
NZ_CP009583_3	3.22\|1908230\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908230-1908261	32	NZ_CP031082	Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence	125065-125096	10	0.688
NZ_CP009583_3	3.24\|1908352\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1908352-1908383	32	NZ_CP020386	Rhodovulum sp. MB263 plasmid pRSMBB, complete sequence	54782-54813	10	0.688
NZ_CP009583_3	3.44\|1909572\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909572-1909603	32	NZ_CP045351	Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence	919283-919314	10	0.688
NZ_CP009583_3	3.50\|1909938\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1909938-1909969	32	NZ_CP045421	Maribius sp. THAF1 plasmid pTHAF1_a, complete sequence	8041-8072	10	0.688
NZ_CP009583_1	1.21\|28543\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	28543-28574	32	NZ_CP021807	Sinorhizobium meliloti strain T073 plasmid accessoryA, complete sequence	75057-75088	11	0.656
NZ_CP009583_3	3.1\|1906948\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1906948-1906979	32	NC_017958	Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence	104791-104822	11	0.656
NZ_CP009583_3	3.4\|1907131\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907131-1907162	32	NC_009958	Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI04, complete sequence	27713-27744	11	0.656
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	NZ_CP026049	Raoultella planticola strain FDAARGOS_64 plasmid unnamed2, complete sequence	204064-204095	11	0.656
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	NZ_CP026276	Klebsiella oxytoca strain KONIH5 plasmid pKOR-ab4d, complete sequence	120433-120464	11	0.656
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	NZ_CP008842	Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete sequence	53685-53716	11	0.656
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	NZ_CP042546	Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence	148099-148130	11	0.656
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	NZ_CP013339	Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL1, complete sequence	98778-98809	11	0.656
NZ_CP009583_3	3.14\|1907742\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907742-1907773	32	NZ_CP036439	Klebsiella pneumoniae strain ABFQB plasmid unnamed1, complete sequence	6400-6431	11	0.656

1. spacer 1.10|27872|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021236 (Pontibacter actiniarum strain DSM 19842 plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.812

cctttaccttgcgcagaacaagctgcacagca	CRISPR spacer
cctttaccttgcgcagtacaggctgcagctga	Protospacer
**************** ***.******    *

2. spacer 3.45|1909633|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN809998 (Pseudomonas aeruginosa strain MH19 plasmid pPAMH19, complete sequence) position: , mismatch: 6, identity: 0.812

atcctcaacggttttgagaacag-ttagtggtt	CRISPR spacer
atcgacaacggttttgagaacagccttatggt-	Protospacer
***  ****************** .* .****

3. spacer 3.6|1907253|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_016654 (Rhodococcus phage REQ3, complete genome) position: , mismatch: 7, identity: 0.781

gctgcgggtccgagcttcgcgatcacgcggtc	CRISPR spacer
gcgttggcgccgatcttcgcgatgacgcggtc	Protospacer
**  .**  **** ********* ********

4. spacer 3.7|1907314|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018466 (Xanthomonas euvesicatoria strain LMG930 plasmid pLMG930.3, complete sequence) position: , mismatch: 7, identity: 0.781

gactggacatgcccgtcctgcggcacacagtg	CRISPR spacer
caagggcgatgcccgtcctgcggcgcaccgtg	Protospacer
 *  **  ****************.*** ***

5. spacer 3.7|1907314|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020976 (Xanthomonas phaseoli pv. phaseoli strain CFBP6982 plasmid pA) position: , mismatch: 7, identity: 0.781

gactggacatgcccgtcctgcggcacacagtg	CRISPR spacer
caagggcgatgcccgtcctgcggcgcaccgtg	Protospacer
 *  **  ****************.*** ***

6. spacer 3.7|1907314|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020965 (Xanthomonas phaseoli pv. phaseoli strain CFBP412 plasmid pA, complete sequence) position: , mismatch: 7, identity: 0.781

gactggacatgcccgtcctgcggcacacagtg	CRISPR spacer
caagggcgatgcccgtcctgcggcgcaccgtg	Protospacer
 *  **  ****************.*** ***

7. spacer 3.7|1907314|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011162 (Xanthomonas citri pv. aurantifolii strain FDC 1559 plasmid pXfc38, complete sequence) position: , mismatch: 7, identity: 0.781

gactggacatgcccgtcctgcggcacacagtg	CRISPR spacer
cacgggcgctgcccgtcctgcggcgcaccgtg	Protospacer
 ** **   ***************.*** ***

8. spacer 3.7|1907314|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP011251 (Xanthomonas citri pv. aurantifolii strain FDC 1561 plasmid pXfb33, complete sequence) position: , mismatch: 7, identity: 0.781

gactggacatgcccgtcctgcggcacacagtg	CRISPR spacer
cacgggcgctgcccgtcctgcggcgcaccgtg	Protospacer
 ** **   ***************.*** ***

9. spacer 3.7|1907314|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to MN813684 (Microbacterium phage Terij, complete genome) position: , mismatch: 7, identity: 0.781

gactggacatgcccgtcctgcggcacacagtg	CRISPR spacer
gggtggacatgcccggtctgcggcacctcgtg	Protospacer
*. ************ .********* . ***

10. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP051728 (Escherichia coli strain SCU-111 plasmid pSCU-111-1, complete sequence) position: , mismatch: 7, identity: 0.781

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
tatatggatgcggtataaatattgcgccagca	Protospacer
 **.****.**************** *   **

11. spacer 3.17|1907925|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_015253 (Brochothrix phage A9, complete genome) position: , mismatch: 7, identity: 0.781

gtgaaatcttctgattttgagctggtgtattc	CRISPR spacer
tcccaatcttctgattttgagatggtgtcttt	Protospacer
 .  ***************** ****** **.

12. spacer 3.23|1908291|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to MN850587 (Escherichia phage mistaenkt, complete genome) position: , mismatch: 7, identity: 0.781

cgtcagtggtttattcatcgtttctgctttct	CRISPR spacer
catcattggtttattcatcggttctgtcttac	Protospacer
*.*** ************** *****..** .

13. spacer 3.23|1908291|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_028935 (Escherichia phage SUSP2, complete genome) position: , mismatch: 7, identity: 0.781

cgtcagtggtttattcatcgtttctgctttct	CRISPR spacer
catcattggtttattcatcggttctgtcttac	Protospacer
*.*** ************** *****..** .

14. spacer 3.44|1909572|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_018701 (Sinorhizobium meliloti Rm41 plasmid pSYMB, complete sequence) position: , mismatch: 7, identity: 0.781

agcttgttggaaagaagactgcgcaccttgaa---	CRISPR spacer
ggcttgttggaaacaagacagcg---ctcgaagcg	Protospacer
.************ ***** ***   **.***

15. spacer 3.44|1909572|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021810 (Sinorhizobium meliloti strain Rm41 plasmid psymB, complete sequence) position: , mismatch: 7, identity: 0.781

agcttgttggaaagaagactgcgcaccttgaa---	CRISPR spacer
ggcttgttggaaacaagacagcg---ctcgaagcg	Protospacer
.************ ***** ***   **.***

16. spacer 3.44|1909572|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021218 (Sinorhizobium meliloti RU11/001 plasmid pSymB, complete sequence) position: , mismatch: 7, identity: 0.781

agcttgttggaaagaagactgcgcaccttgaa---	CRISPR spacer
ggcttgttggaaacaagacagcg---ctcgaagcg	Protospacer
.************ ***** ***   **.***

17. spacer 3.45|1909633|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046903 (Pseudomonas stutzeri strain PM101005 plasmid p1_PM101005, complete sequence) position: , mismatch: 7, identity: 0.781

atcctcaacggttttgagaacag-ttagtggtt	CRISPR spacer
atcgacaacggttttgagaacagccttatggc-	Protospacer
***  ****************** .* .***.

18. spacer 3.56|1910304|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_006826 (Sphingobium xenophagum QYY plasmid pSx-Qyy, complete sequence) position: , mismatch: 7, identity: 0.781

atcattgcccagctcacgagcacgctcggcgg	CRISPR spacer
ctcctgtgcctgctcacgggcacgctcggcgg	Protospacer
 ** *   ** *******.*************

19. spacer 1.6|27628|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to CP000876 (Herpetosiphon aurantiacus DSM 785 plasmid pHAU01, complete sequence) position: , mismatch: 8, identity: 0.75

acccaatcgcaggcttcgccggcggtttcgcc	CRISPR spacer
tggccataacaggcttcacaggcggtttcgcc	Protospacer
   * ** .********.* ************

20. spacer 3.3|1907070|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP018440 (Undibacterium sp. KW1 plasmid pUKW01, complete sequence) position: , mismatch: 8, identity: 0.75

cgcacctatccacgaaaggttggcaagcagaa	CRISPR spacer
cgccggtatcgacgaaatgttggcaagcaagc	Protospacer
***   **** ****** ***********..

21. spacer 3.6|1907253|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032347 (Azospirillum brasilense strain MTCC4039 plasmid p2, complete sequence) position: , mismatch: 8, identity: 0.75

gctgcgggtccgagcttcgcgatcacgcggtc	CRISPR spacer
ggcttgaggccgtgcttcgcgaccacgcggtc	Protospacer
* . .*.* *** *********.*********

22. spacer 3.8|1907375|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP015882 (Ensifer adhaerens strain Casida A plasmid pCasidaAB, complete sequence) position: , mismatch: 8, identity: 0.75

atccaacgtcatcgccgccgaagcatgcccca	CRISPR spacer
gacgaacgtcatcggcgccaaagcatgcggcg	Protospacer
. * ********** ****.********  *.

23. spacer 3.8|1907375|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP030264 (Ensifer adhaerens strain Corn53 plasmid AB, complete sequence) position: , mismatch: 8, identity: 0.75

atccaacgtcatcgccgccgaagcatgcccca	CRISPR spacer
gacgaacgtcatcggcgccaaagcatgcggcg	Protospacer
. * ********** ****.********  *.

24. spacer 3.20|1908108|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_015951 (Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, complete sequence) position: , mismatch: 8, identity: 0.75

ggcctagaagccgtggatgtactcaaagaatt	CRISPR spacer
gttatagaagccgtcgatgtactcgaagagcg	Protospacer
* . ********** *********.****..

25. spacer 3.20|1908108|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045548 (Streptomyces sp. SYP-A7193 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.75

ggcctagaagccgtggatgtactcaaagaatt	CRISPR spacer
gttatagaagccgtcgatgtactcgaagagcg	Protospacer
* . ********** *********.****..

26. spacer 3.27|1908535|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_019782 (Lactobacillus phage AQ113, complete genome) position: , mismatch: 8, identity: 0.75

ggccttaggattatcaacggcgaaaatgcgct	CRISPR spacer
tttgttaggattataaacgccgaaaatgtcct	Protospacer
  . ********** **** ********. **

27. spacer 3.43|1909511|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN831184 (Vibrio cholerae isolate V. cholerae 116-14 plasmid pNDM-116-14, complete sequence) position: , mismatch: 8, identity: 0.75

aagactgcttgatcatgctctactgccgctgc	CRISPR spacer
gagactgcttgctcttgctctacttgctttgt	Protospacer
.********** ** *********  * .**.

28. spacer 3.45|1909633|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012102 (Bacillus thuringiensis strain HS18-1 plasmid pHS18-3, complete sequence) position: , mismatch: 8, identity: 0.75

atcctcaacggttttgagaacagttagtggtt	CRISPR spacer
aagttcaacgattttaagaacagttagagaat	Protospacer
*  .******.****.*********** *. *

29. spacer 3.51|1909999|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR594669 (Variovorax sp. SRS16 plasmid 4) position: , mismatch: 8, identity: 0.75

agctgtgcccataggcgacagtagcgtagcgg	CRISPR spacer
aattcggcccataggcgccagtggcgtagaag	Protospacer
*..*  *********** ****.****** .*

30. spacer 3.52|1910060|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP022319 (Burkholderia sp. THE68 plasmid BTHE68_p1, complete sequence) position: , mismatch: 8, identity: 0.75

cagttgcggtcgaagccgctgcagcgggctgg	CRISPR spacer
tcgcggcggtcgaaggcgcggcagcgggcgcg	Protospacer
. *. ********** *** *********  *

31. spacer 3.56|1910304|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020900 (Rhizobium phaseoli Brasil 5 strain Bra5 plasmid pRphaBra5d, complete sequence) position: , mismatch: 8, identity: 0.75

atcattgcccagctcacgagcacgctcggcgg	CRISPR spacer
gccgtggtccagctcgcgatcacgctcggcgc	Protospacer
..*.* *.*******.*** ***********

32. spacer 1.3|27445|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032695 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525c, complete sequence) position: , mismatch: 9, identity: 0.719

tgctcaagcgatgcattcaacttctgcaactc	CRISPR spacer
ggagcccgcgatgcatacaactgctgcaacga	Protospacer
 *  *  ********* ***** *******

33. spacer 1.3|27445|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_041878 (Pectobacterium phage CBB, complete genome) position: , mismatch: 9, identity: 0.719

tgctcaagcgatgcattcaacttctgcaactc	CRISPR spacer
ttgaacagcgatgctttcaatttctgcaaatg	Protospacer
*     ******** *****.******** *

34. spacer 1.6|27628|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN832560 (Paracoccus aminovorans isolate JCM7685 plasmid II, complete sequence) position: , mismatch: 9, identity: 0.719

acccaatcgcaggcttcgccggcggtttcgcc	CRISPR spacer
ccggtttcgcaggtttcgcgggcggtttcgtg	Protospacer
 *    *******.***** **********.

35. spacer 1.6|27628|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP050098 (Rhizobium leguminosarum bv. trifolii strain 9B plasmid pRL9b4, complete sequence) position: , mismatch: 9, identity: 0.719

acccaatcgcaggcttcgccggcggtttcgcc	CRISPR spacer
agaagatcgcaggctgcgccggcggctttgaa	Protospacer
*   .********** *********.**.*

36. spacer 1.6|27628|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_019847 (Sinorhizobium meliloti GR4 plasmid pRmeGR4b, complete sequence) position: , mismatch: 9, identity: 0.719

acccaatcgcaggcttcgccggcggtttcgcc	CRISPR spacer
cggcgctcgcaggcgtcgccggcggattctac	Protospacer
   *. ******** ********** ***  *

37. spacer 1.10|27872|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to MN855702 (Bacteriophage sp. isolate 300, complete genome) position: , mismatch: 9, identity: 0.719

cctttaccttgcgcagaacaagctgcacagca	CRISPR spacer
accatacattccgcagaacaagctgcataatt	Protospacer
 *. *** ** ****************.*..

38. spacer 1.21|28543|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_019789 (Deinococcus peraridilitoris DSM 19664 plasmid pDEIPE01, complete sequence) position: , mismatch: 9, identity: 0.719

atgctcttgacggtgccgaactcagccaggta	CRISPR spacer
tcgatctcgacgctgccgaactcagcctgcac	Protospacer
 .* ***.**** ************** *

39. spacer 1.21|28543|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to KY653122 (Morganella phage IME1369_03, complete genome) position: , mismatch: 9, identity: 0.719

atgctcttgacggtgccgaactcagccaggta	CRISPR spacer
tctttgttgccggtgccgaactctgccagcca	Protospacer
 . .* *** ************* ***** .*

40. spacer 3.5|1907192|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to MK937597 (Gordonia phage Spooky, complete genome) position: , mismatch: 9, identity: 0.719

gagacctcgctttagatgtcaccggatcaata	CRISPR spacer
aagacctcgcgttcgatgtcaccgcgtgggtg	Protospacer
.********* ** ********** .* ..*.

41. spacer 3.6|1907253|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to MT708545 (Rhizobium phage Pasto, complete genome) position: , mismatch: 9, identity: 0.719

gctgcgggtccgagcttcgcgatcacgcggtc	CRISPR spacer
ttcgaccgaccgagcttcgcgatcacggcgtc	Protospacer
 ..*   * ******************  ***

42. spacer 3.8|1907375|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_008010 (Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence) position: , mismatch: 9, identity: 0.719

atccaacgtcatcgccgccgaagcatgcccca	CRISPR spacer
ggtctgcgacagcgccgccgaagcatgcccgg	Protospacer
. .* .** ** ****************** .

43. spacer 3.8|1907375|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP022367 (Azospirillum sp. TSH58 plasmid TSH58_p02, complete sequence) position: , mismatch: 9, identity: 0.719

atccaacgtcatcgccgccgaagcatgcccca	CRISPR spacer
gtccaacgtctccgccgccgaagcgcgtttcg	Protospacer
.********* .************..*...*.

44. spacer 3.20|1908108|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016366 (Phaeobacter porticola strain P97 plasmid pP97_b, complete sequence) position: , mismatch: 9, identity: 0.719

ggcctagaagccgtggatgtactcaaagaatt	CRISPR spacer
attttagaagccgttgatgtattcaaagatcg	Protospacer
. ..********** ******.******* .

45. spacer 3.23|1908291|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to CP008937 (Candidatus Caedibacter acanthamoebae plasmid Plasmid_00001, complete sequence) position: , mismatch: 9, identity: 0.719

cgtcagtggtttattcatcgtttctgctttct	CRISPR spacer
aagctcagatttattcatcgtttatcctttct	Protospacer
 . *   *.************** * ******

46. spacer 3.26|1908474|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP054606 (Sulfitobacter pseudonitzschiae strain H46 plasmid unnamed7, complete sequence) position: , mismatch: 9, identity: 0.719

tggaagcgattggttatctcgaacgactgcaa	CRISPR spacer
agataccgattggtgatttcgaacgactggtg	Protospacer
 *. * ******** **.***********  .

47. spacer 3.28|1908596|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to KJ510412 (Mycobacterium phage ZoeJ, complete genome) position: , mismatch: 9, identity: 0.719

gtacccagcgggttgccctttgcactttccca	CRISPR spacer
ccgcccggcgggttgcccttagcactgccctg	Protospacer
 ..***.************* ***** .**..

48. spacer 3.29|1908657|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031959 (Phaeobacter sp. LSS9 plasmid unnamed3, complete sequence) position: , mismatch: 9, identity: 0.719

gctgtgtgttttttgtgaaggtgggtggcatc	CRISPR spacer
atgccgaggtttttgagaaggtggatggcatc	Protospacer
..  .* * ****** ********.*******

49. spacer 3.29|1908657|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010597 (Phaeobacter inhibens strain P10 plasmid pP10_b, complete sequence) position: , mismatch: 9, identity: 0.719

gctgtgtgttttttgtgaaggtgggtggcatc	CRISPR spacer
atgccgaggtttttgagaaggtggatggcatc	Protospacer
..  .* * ****** ********.*******

50. spacer 3.29|1908657|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_018287 (Phaeobacter inhibens DSM 17395 plasmid pPGA1_78, complete sequence) position: , mismatch: 9, identity: 0.719

gctgtgtgttttttgtgaaggtgggtggcatc	CRISPR spacer
atgccgaggtttttgagaaggtggatggcatc	Protospacer
..  .* * ****** ********.*******

51. spacer 3.29|1908657|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031950 (Phaeobacter inhibens strain BS107 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.719

gctgtgtgttttttgtgaaggtgggtggcatc	CRISPR spacer
atgccgaggtttttgagaaggtggatggcatc	Protospacer
..  .* * ****** ********.*******

52. spacer 3.52|1910060|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to MN304815 (Burkholderiales phage 68_11, complete genome) position: , mismatch: 9, identity: 0.719

cagttgcggtcgaagccgctgcagcgggctgg	CRISPR spacer
ccaagccggtcaaagccgcggcagcgggcggt	Protospacer
* .   *****.******* ********* *

53. spacer 3.54|1910182|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to MK448905 (Streptococcus phage Javan318, complete genome) position: , mismatch: 9, identity: 0.719

caatcggctggcctatagtgttcaaaacttcc	CRISPR spacer
tagcatgctggcatatagttttcaaaactatc	Protospacer
.*..  ****** ****** ********* .*

54. spacer 3.55|1910243|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_020867 (Synechococcus phage S-RIP1 genomic sequence) position: , mismatch: 9, identity: 0.719

aagctgggcaaccctcgaccccgctggaagca	CRISPR spacer
gatggagaaaacccttgacaccgctggaagca	Protospacer
.*   .*. ******.*** ************

55. spacer 3.56|1910304|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045339 (Vibrio sp. THAF190c plasmid pTHAF190c_a, complete sequence) position: , mismatch: 9, identity: 0.719

atcattgcccagctcacgagcacgctcggcgg	CRISPR spacer
ggcaatgcccagctcactagcacgcccattcg	Protospacer
. ** ************ *******.*. . *

56. spacer 1.6|27628|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to CP000662 (Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, complete sequence) position: , mismatch: 10, identity: 0.688

acccaatcgcaggcttcgccggcggtttcgcc	CRISPR spacer
agaagctcgcagccttcgccgacggtttcctg	Protospacer
*   . ****** ********.******* .

57. spacer 1.6|27628|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP010864 (Marinovum algicola DG 898 plasmid pMaD9, complete sequence) position: , mismatch: 10, identity: 0.688

acccaatcgcaggcttcgccggcggtttcgcc	CRISPR spacer
ctggcgtcgcaggctgcggcggcggtttcatc	Protospacer
 .   .********* ** **********..*

58. spacer 1.21|28543|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP028969 (Aminobacter sp. MSH1 plasmid pUSP1, complete sequence) position: , mismatch: 10, identity: 0.688

atgctcttgacggtgccgaactcagccaggta	CRISPR spacer
tttatcttgacggtgccgacctccgcctctgc	Protospacer
 *  *************** *** ***

59. spacer 1.21|28543|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026266 (Aminobacter sp. MSH1 plasmid pAM01, complete sequence) position: , mismatch: 10, identity: 0.688

atgctcttgacggtgccgaactcagccaggta	CRISPR spacer
tttatcttgacggtgccgacctccgcctctgc	Protospacer
 *  *************** *** ***

60. spacer 1.22|28604|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_019401 (Cronobacter phage vB_CsaM_GAP32, complete genome) position: , mismatch: 10, identity: 0.688

atggcgggctaggtgatatttgggataaagtg	CRISPR spacer
ttaaaacgcaagatgatatttgggataaagaa	Protospacer
 *.. . ** **.***************** .

61. spacer 1.23|28665|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_012586 (Sinorhizobium fredii NGR234 plasmid pNGR234b, complete sequence) position: , mismatch: 10, identity: 0.688

gaatacggattccggtgccacaaggccataat	CRISPR spacer
tctggcgaatgccggtgccacaaggccagagc	Protospacer
    .**.** ***************** *..

62. spacer 3.7|1907314|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP017750 (Cupriavidus sp. USMAA2-4 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.688

gactggacatgcccgtcctgcggcacacagtg	CRISPR spacer
gcatggacatgcccggcctgcgggacgagtca	Protospacer
*  ************ ******* **. . ..

63. spacer 3.7|1907314|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023738 (Methylosinus trichosporium OB3b plasmid pOB3b1, complete sequence) position: , mismatch: 10, identity: 0.688

gactggacatgcccgtcctgcggcacacagtg	CRISPR spacer
atctggacaggctcgtcctgcggcaaggcccg	Protospacer
. ******* **.************ .   .*

64. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to AP013525 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7A-MedDCM-OCT-S30-C5) position: , mismatch: 10, identity: 0.688

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
gtggtggaggcggtttaaatattgctggtatc	Protospacer
*  ***** ***** *********** .. .

65. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to AP013526 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7A-MedDCM-OCT-S33-C3) position: , mismatch: 10, identity: 0.688

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
gtggtggaggcggtttaaatattgctggtatc	Protospacer
*  ***** ***** *********** .. .

66. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to AP013983 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C7A-MedDCM-OCT-S35-C5, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 10, identity: 0.688

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
gtggtggaggcggtttaaatattgctggtatc	Protospacer
*  ***** ***** *********** .. .

67. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to AP013527 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G3, isolate: uvMED-CGR-C7A-MedDCM-OCT-S38-C7) position: , mismatch: 10, identity: 0.688

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
gtggtggaggcggtttaaatattgctggtatc	Protospacer
*  ***** ***** *********** .. .

68. spacer 3.22|1908230|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031082 (Paracoccus yeei strain CCUG 32053 plasmid pYEE4, complete sequence) position: , mismatch: 10, identity: 0.688

ctcggactccacaatttcactcaggtattcgg	CRISPR spacer
attatactccaaaatttcagtcaggtatcgat	Protospacer
 *.. ****** ******* ********. .

69. spacer 3.24|1908352|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP020386 (Rhodovulum sp. MB263 plasmid pRSMBB, complete sequence) position: , mismatch: 10, identity: 0.688

agtggataccgtcgcagttgccgtcacggaag	CRISPR spacer
cactgtcaccgtcgctgttgcagtcacggagc	Protospacer
 .. * .******** ***** ********.

70. spacer 3.44|1909572|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045351 (Vibrio sp. THAF100 plasmid pTHAF100_a, complete sequence) position: , mismatch: 10, identity: 0.688

agcttgttggaaagaagactgcgcaccttgaa	CRISPR spacer
cccttgttggtaagaagacttcgcaatccaag	Protospacer
  ******** ********* **** ....*.

71. spacer 3.50|1909938|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP045421 (Maribius sp. THAF1 plasmid pTHAF1_a, complete sequence) position: , mismatch: 10, identity: 0.688

gggctagaacccgtgcgtcttgatcctgatgg	CRISPR spacer
accccgtcactcgtgcgtcttgatcccgatgt	Protospacer
.  *..  **.***************.****

72. spacer 1.21|28543|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP021807 (Sinorhizobium meliloti strain T073 plasmid accessoryA, complete sequence) position: , mismatch: 11, identity: 0.656

atgctcttgacggtgccgaactcagccaggta	CRISPR spacer
tccggctcgacggggccgaactcagccattgg	Protospacer
 .   **.***** **************   .

73. spacer 3.1|1906948|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 11, identity: 0.656

atcatggaggcgaggcttgacaagcttcaggt	CRISPR spacer
gaggcctgggcgaagcttgaaaagcttcaggc	Protospacer
.  ..  .*****.****** **********.

74. spacer 3.4|1907131|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NC_009958 (Dinoroseobacter shibae DFL 12 = DSM 16493 plasmid pDSHI04, complete sequence) position: , mismatch: 11, identity: 0.656

gtggtgagctatccggcttggtggagcaggct	CRISPR spacer
aactccggccatccggcttcgtggagcaggaa	Protospacer
.   . .**.********* **********

75. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026049 (Raoultella planticola strain FDAARGOS_64 plasmid unnamed2, complete sequence) position: , mismatch: 11, identity: 0.656

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
tccgtggacgcggtttaaatatcgctggaagc	Protospacer
  .*********** *******.*** .

76. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP026276 (Klebsiella oxytoca strain KONIH5 plasmid pKOR-ab4d, complete sequence) position: , mismatch: 11, identity: 0.656

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
tccgtggacgcggtttaaatatcgctggaagc	Protospacer
  .*********** *******.*** .

77. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP008842 (Klebsiella michiganensis strain M1 plasmid pKOXM1A, complete sequence) position: , mismatch: 11, identity: 0.656

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
tccgtggacgcggtttaaatatcgctggaagc	Protospacer
  .*********** *******.*** .

78. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042546 (Klebsiella michiganensis strain C52 plasmid pC52_001, complete sequence) position: , mismatch: 11, identity: 0.656

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
tccgtggacgcggtttaaatatcgctggaagc	Protospacer
  .*********** *******.*** .

79. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013339 (Raoultella ornithinolytica strain Yangling I2 plasmid pKPYL1, complete sequence) position: , mismatch: 11, identity: 0.656

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
tccgtggacgcggtttaaatatcgctggaagc	Protospacer
  .*********** *******.*** .

80. spacer 3.14|1907742|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036439 (Klebsiella pneumoniae strain ABFQB plasmid unnamed1, complete sequence) position: , mismatch: 11, identity: 0.656

gatgtggacgcggtataaatattgctcactca	CRISPR spacer
tccgtggacgcggtttaaatatcgctggaagc	Protospacer
  .*********** *******.*** .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1829274 : 1901222

Tupanvirus(27.27%)

bacteriocin,protease

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013912105.1\|1829274_1830561_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.1e-132	55.6
WP_029974865.1\|1830722_1833485_-	aminodeoxychorismate synthase component I	S4VNU7	Pandoravirus	4.4e-80	32.9
WP_013912108.1\|1833561_1834191_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.4e-37	43.5
WP_013912109.1\|1834206_1834806_-\|protease	ATP-dependent Clp protease proteolytic subunit	A0A223W000	Agrobacterium_phage	1.3e-42	48.3
WP_029974863.1\|1835146_1836499_-	trigger factor	NA	NA	NA	NA
WP_013912111.1\|1837379_1837622_+	hypothetical protein	A0A1W6JRB8	Corynebacterium_phage	3.9e-09	48.4
WP_013912112.1\|1837756_1838560_+	hypothetical protein	NA	NA	NA	NA
WP_029974862.1\|1838642_1839653_-	pirin family protein	NA	NA	NA	NA
WP_014836691.1\|1839770_1840244_-	ribose-5-phosphate isomerase	NA	NA	NA	NA
WP_029974861.1\|1840466_1841087_-	DSBA oxidoreductase	NA	NA	NA	NA
WP_038622215.1\|1841389_1844005_+	aminopeptidase N	A0A2K9L1R3	Tupanvirus	8.5e-41	32.3
WP_038622769.1\|1844434_1845109_+	mechanosensitive ion channel	NA	NA	NA	NA
WP_014836694.1\|1845134_1845527_+	globin	NA	NA	NA	NA
WP_038622217.1\|1845538_1846435_+	DMT family transporter	NA	NA	NA	NA
WP_014836695.1\|1846438_1847047_-	hypothetical protein	NA	NA	NA	NA
WP_013912121.1\|1847052_1847481_-	acyl-CoA thioesterase	NA	NA	NA	NA
WP_013912122.1\|1847681_1849352_-	energy-dependent translational throttle protein EttA	A0A2K9L0W2	Tupanvirus	6.0e-48	27.9
WP_014836696.1\|1849522_1850086_-	single-stranded DNA-binding protein	NA	NA	NA	NA
WP_038622223.1\|1850620_1852339_+	hypothetical protein	NA	NA	NA	NA
WP_038622225.1\|1852335_1853886_+	YcaO-like family protein	NA	NA	NA	NA
WP_014526136.1\|1853921_1855406_+	nitroreductase	NA	NA	NA	NA
WP_038622228.1\|1855402_1858003_+	lantibiotic dehydratase	NA	NA	NA	NA
WP_038622232.1\|1858002_1859016_+	hypothetical protein	NA	NA	NA	NA
WP_029974850.1\|1859012_1859990_+	hypothetical protein	NA	NA	NA	NA
WP_101507658.1\|1860028_1860205_+\|bacteriocin	thiazolylpeptide-type bacteriocin	NA	NA	NA	NA
WP_029974849.1\|1860279_1861731_+	YcaO-like family protein	NA	NA	NA	NA
WP_029974847.1\|1861763_1862522_-	ABC transporter permease	NA	NA	NA	NA
WP_029974844.1\|1862518_1863442_-	ABC transporter ATP-binding protein	W6JKT0	Anomala_cuprea_entomopoxvirus	1.1e-19	26.4
WP_038622235.1\|1863602_1865648_-	bifunctional copper resistance protein CopD/cytochrome c oxidase assembly protein	NA	NA	NA	NA
WP_029974838.1\|1866247_1868533_+	carbon starvation protein A	NA	NA	NA	NA
WP_013912136.1\|1868552_1868753_+	YbdD/YjiX family protein	NA	NA	NA	NA
WP_029974837.1\|1869302_1869992_+	hypothetical protein	NA	NA	NA	NA
WP_029974835.1\|1870085_1871927_-	S8 family serine peptidase	A0A1B0T6A2	Bacillus_phage	3.9e-32	33.7
WP_014836710.1\|1872201_1873197_+	oxidoreductase	NA	NA	NA	NA
WP_023636144.1\|1873336_1874140_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_013912141.1\|1874205_1874865_+	oligoribonuclease	M4M9I5	Vibrio_phage	2.9e-22	35.1
WP_038620037.1\|1875044_1875872_+	dihydrodipicolinate synthase family protein	NA	NA	NA	NA
WP_038622240.1\|1875935_1877123_-	L,D-transpeptidase	NA	NA	NA	NA
WP_038622243.1\|1877829_1878825_+	NADP-dependent oxidoreductase	NA	NA	NA	NA
WP_038622246.1\|1879034_1879589_+	isochorismatase family protein	A0A2K9L2K0	Tupanvirus	5.2e-17	32.3
WP_013912164.1\|1879604_1879949_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_013912165.1\|1880062_1880338_-	DUF3618 domain-containing protein	NA	NA	NA	NA
WP_013912166.1\|1880426_1880906_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA
WP_013912167.1\|1880946_1881600_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_023636152.1\|1881603_1881999_-	holo-ACP synthase	NA	NA	NA	NA
WP_038622249.1\|1882133_1891232_-	type I polyketide synthase	NA	NA	NA	NA
WP_038622252.1\|1891453_1891702_-	hypothetical protein	NA	NA	NA	NA
WP_052096414.1\|1891912_1893040_+	two-component sensor histidine kinase	NA	NA	NA	NA
WP_013912172.1\|1893036_1893663_+	response regulator transcription factor	NA	NA	NA	NA
WP_038622256.1\|1893707_1894751_+	DUF418 domain-containing protein	NA	NA	NA	NA
WP_038622259.1\|1895239_1895686_+	hypothetical protein	NA	NA	NA	NA
WP_014526157.1\|1895762_1896122_+	DUF3817 domain-containing protein	NA	NA	NA	NA
WP_029974826.1\|1896191_1896815_-	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA
WP_029974823.1\|1896811_1897546_-	ribonuclease PH	NA	NA	NA	NA
WP_013912181.1\|1897584_1898352_-	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_029974821.1\|1898424_1899318_-	glutamate racemase	NA	NA	NA	NA
WP_029974819.1\|1899384_1900203_-\|protease	rhomboid family intramembrane serine protease	NA	NA	NA	NA
WP_013912184.1\|1900288_1900825_-	DUF2017 domain-containing protein	NA	NA	NA	NA
WP_032802901.1\|1900922_1901222_-\|protease	ATP-dependent Clp protease adapter ClpS	NA	NA	NA	NA

DBSCAN-SWA_2

2015809 : 2047951

Corynebacterium_phage(33.33%)

tail,portal,integrase

attL 2028057:2028073|attR 2051785:2051801

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038622355.1\|2015809_2016916_-	hypothetical protein	A0A1W6JRE7	Corynebacterium_phage	4.9e-83	62.6
WP_013912279.1\|2016908_2017808_-	hypothetical protein	Q37921	Corynephage	7.9e-55	41.8
WP_038622358.1\|2017808_2018591_-	hypothetical protein	A0A1P8D5L6	Corynebacterium_phage	4.5e-22	30.6
WP_038622360.1\|2018608_2024785_-\|tail	phage tail tape measure protein	A0A2P1A0P5	Gordonia_phage	5.2e-97	33.9
WP_023636254.1\|2024801_2025137_-	hypothetical protein	NA	NA	NA	NA
WP_023636255.1\|2025244_2025598_-	hypothetical protein	NA	NA	NA	NA
WP_023636256.1\|2025694_2026537_-	hypothetical protein	A0A220NQQ6	Corynebacterium_phage	8.0e-09	40.6
WP_023636257.1\|2026546_2027002_-	hypothetical protein	A0A1C9EI09	Gordonia_phage	1.0e-10	28.9
WP_023636258.1\|2026998_2027319_-	hypothetical protein	A0A1C9EHV8	Gordonia_phage	3.7e-15	42.7
WP_023636259.1\|2027315_2027687_-	hypothetical protein	NA	NA	NA	NA
WP_080669074.1\|2027683_2028127_-	hypothetical protein	NA	NA	NA	NA
WP_023636261.1\|2028023_2028350_-	hypothetical protein	NA	NA	NA	NA
2028057:2028073	attL	NA	NA	NA	NA
WP_023636262.1\|2028362_2029352_-	hypothetical protein	A0A162E1G1	Gordonia_phage	1.1e-105	62.3
WP_080669080.1\|2029364_2029772_-	DUF4355 domain-containing protein	NA	NA	NA	NA
WP_023636264.1\|2030029_2030329_-	hypothetical protein	NA	NA	NA	NA
WP_023636265.1\|2030340_2031771_-	EndoU domain-containing protein	A0A1C9EHV4	Gordonia_phage	9.4e-26	33.6
WP_023636266.1\|2031771_2033163_-\|portal	phage portal protein	A0A2H4JAT8	uncultured_Caudovirales_phage	5.9e-49	33.0
WP_023636267.1\|2033162_2034731_-	hypothetical protein	D7NW48	Streptomyces_phage	6.9e-123	47.2
WP_023636268.1\|2034756_2035203_-	hypothetical protein	NA	NA	NA	NA
WP_144412735.1\|2035804_2036374_-	hypothetical protein	A0A1L6BZE1	Pasteurella_phage	1.4e-09	28.6
WP_038622367.1\|2036478_2036670_-	hypothetical protein	NA	NA	NA	NA
WP_038622369.1\|2036666_2037023_-	hypothetical protein	A0A2H4P8K9	Corynebacterium_phage	4.6e-06	40.7
WP_052096417.1\|2037019_2037877_-	hypothetical protein	NA	NA	NA	NA
WP_080745493.1\|2037886_2038471_-	RusA family crossover junction endodeoxyribonuclease	D6PG23	uncultured_phage	2.3e-10	37.7
WP_052096419.1\|2039327_2039801_-	single-stranded DNA-binding protein	G1D5D5	Mycobacterium_phage	1.3e-13	40.0
WP_052096421.1\|2039797_2040649_-	hypothetical protein	A0A2D1GGG2	Gordonia_phage	6.8e-40	45.5
WP_023636280.1\|2040659_2040827_-	hypothetical protein	NA	NA	NA	NA
WP_023636281.1\|2040810_2041710_-	hypothetical protein	A0A2D1GGN0	Gordonia_phage	9.0e-59	45.9
WP_023636282.1\|2041691_2041868_-	hypothetical protein	NA	NA	NA	NA
WP_023636283.1\|2041864_2042275_-	hypothetical protein	NA	NA	NA	NA
WP_147285029.1\|2042271_2042505_-	hypothetical protein	NA	NA	NA	NA
WP_155245802.1\|2042516_2042657_-	hypothetical protein	NA	NA	NA	NA
WP_023636286.1\|2043266_2043452_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_155275496.1\|2043493_2044081_-	hypothetical protein	A0A0K1LTX3	Mycobacterium_phage	1.2e-11	42.2
WP_023636288.1\|2044363_2044642_-	hypothetical protein	NA	NA	NA	NA
WP_023636289.1\|2044784_2045303_+	helix-turn-helix transcriptional regulator	A0A1W6JRB0	Corynebacterium_phage	5.2e-19	40.2
WP_023636290.1\|2045312_2045723_+	ImmA/IrrE family metallo-endopeptidase	A0A1W6JRC2	Corynebacterium_phage	1.5e-56	80.5
WP_038622375.1\|2045748_2046111_+	hypothetical protein	NA	NA	NA	NA
WP_023636292.1\|2046121_2046724_+	hypothetical protein	NA	NA	NA	NA
WP_038622378.1\|2046823_2047951_+\|integrase	site-specific integrase	A0A1W6JQG4	Corynebacterium_phage	1.8e-72	43.7
2051785:2051801	attR	NA	NA	NA	NA

DBSCAN-SWA_3

2085659 : 2094123

Pandoravirus(33.33%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_013912356.1\|2085659_2087408_+\|holin	choline dehydrogenase	A0A1V0SI18	Klosneuvirus	1.2e-62	32.2
WP_038622411.1\|2087385_2088054_-	pantoate--beta-alanine ligase	NA	NA	NA	NA
WP_014526241.1\|2088061_2088448_-	hypothetical protein	NA	NA	NA	NA
WP_038622801.1\|2088444_2088960_-	hypothetical protein	NA	NA	NA	NA
WP_013912360.1\|2088970_2089417_-	DUF3180 domain-containing protein	NA	NA	NA	NA
WP_038622414.1\|2089413_2089869_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	S4VNV0	Pandoravirus	1.9e-09	35.3
WP_023636324.1\|2089870_2090212_-	dihydroneopterin aldolase	NA	NA	NA	NA
WP_038622416.1\|2090198_2090981_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	2.5e-20	32.0
WP_013912364.1\|2090982_2091546_-	GTP cyclohydrolase I FolE	A0A1W7AF02	Streptococcus_virus	8.2e-50	58.2
WP_155275497.1\|2091538_2093497_-\|protease	ATP-dependent zinc metalloprotease FtsH	E5EQU5	Bathycoccus_sp._RCC1105_virus	2.0e-111	50.7
WP_014836795.1\|2093541_2094123_-	hypoxanthine phosphoribosyltransferase	A0A218MMB5	uncultured_virus	3.9e-15	31.4

Anti-CRISPR protein detection

Acr_ID: NZ_CP009583.1|WP_023636261.1|2028023_2028350_-|hypothetical-protein

Click the colored protein region to show detailed information

Acr ID

Acr position

Acr size

Homology with known anti

Neighbor HTH/AcRanker

Neighbor Aca

In prophage

Protospacer in prophage

NZ_CP009583.1|WP_023636261.1|2028023_2028350_-|hypothetical-protein

2028023_2028350_-

108 aa aa

2015809-2047951

yes

CRISPR ID	CRISPR type	Spacer info	Spacer location	Spacer length	Protospacer location	Mismatch
NZ_CP009583_3	Orphan	3.8\|1907375\|32\|NZ_CP009583\|PILER-CR,CRISPRCasFinder,CRT	1907375-1907406	32	2047837-2047806	0

1. spacer 3.8|1907375|32|NZ_CP009583|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP009583 position: 2047837-2047806, mismatch: 0

atccaacgtcatcgccgccgaagcatgcccca	CRISPR spacer
atccaacgtcatcgccgccgaagcatgcccca	Protospacer
********************************

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009583

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

Click the colored protein region to show detailed information