Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP009754 Streptomyces sp. CCM_MD2014 chromosome, complete genome 9 crisprs DEDDh,csa3,DinG,WYL,cas3,c2c9_V-U4,Cas9_archaeal,Cas14u_CAS-V,cas4 3 1 5 0

Results visualization

1. NZ_CP009754
Click the left colored region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_1 1911958-1912048 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_2 2481230-2481330 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_3 3133825-3134013 Orphan NA
2 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_4 4513723-4513820 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_5 4532629-4532762 Orphan NA
3 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_6 4698672-4698766 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_7 5335446-5335558 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_8 5478236-5478333 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP009754_9 6060381-6060472 Orphan NA
1 spacers

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
NZ_CP009754_5 5.2|4532687|18|NZ_CP009754|CRT 4532687-4532704 18 NZ_CP009754.1 5172182-5172199 0 1.0
NZ_CP009754_5 5.2|4532687|18|NZ_CP009754|CRT 4532687-4532704 18 NZ_CP009754.1 6394057-6394074 0 1.0
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 3332337-3332356 0 1.0
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 3882469-3882488 0 1.0
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 3882508-3882527 0 1.0
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 3908692-3908711 0 1.0
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 3929906-3929925 0 1.0
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 4717993-4718012 0 1.0
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 5172305-5172324 0 1.0
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 3882469-3882488 1 0.95
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 3882508-3882527 1 0.95
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 3908692-3908711 1 0.95
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 4717993-4718012 1 0.95
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 5172305-5172324 1 0.95
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 3332337-3332356 1 0.95
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 3929906-3929925 1 0.95
NZ_CP009754_5 5.2|4532687|18|NZ_CP009754|CRT 4532687-4532704 18 NZ_CP009754.1 6380713-6380730 1 0.944
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 3908653-3908672 1 0.95
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 4532609-4532628 1 0.95
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 4717915-4717934 1 0.95
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 5172344-5172363 1 0.95
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 6259716-6259735 1 0.95
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 6380796-6380815 1 0.95
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 6394211-6394230 1 0.95
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 2532079-2532098 2 0.9
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 3908653-3908672 2 0.9
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 4717915-4717934 2 0.9
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 5172344-5172363 2 0.9
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 6259716-6259735 2 0.9
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 6380796-6380815 2 0.9
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 6394211-6394230 2 0.9
NZ_CP009754_5 5.1|4532648|20|NZ_CP009754|CRT 4532648-4532667 20 NZ_CP009754.1 4532609-4532628 2 0.9
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 1546193-1546212 2 0.9
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 2532186-2532205 2 0.9
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 4717954-4717973 2 0.9
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP009754.1 5810645-5810664 2 0.9

1. spacer 5.2|4532687|18|NZ_CP009754|CRT matches to position: 5172182-5172199, mismatch: 0, identity: 1.0

caccgccggaggcaaacg	CRISPR spacer
caccgccggaggcaaacg	Protospacer
******************

2. spacer 5.2|4532687|18|NZ_CP009754|CRT matches to position: 6394057-6394074, mismatch: 0, identity: 1.0

caccgccggaggcaaacg	CRISPR spacer
caccgccggaggcaaacg	Protospacer
******************

3. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 3332337-3332356, mismatch: 0, identity: 1.0

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
********************

4. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 3882469-3882488, mismatch: 0, identity: 1.0

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
********************

5. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 3882508-3882527, mismatch: 0, identity: 1.0

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
********************

6. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 3908692-3908711, mismatch: 0, identity: 1.0

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
********************

7. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 3929906-3929925, mismatch: 0, identity: 1.0

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
********************

8. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 4717993-4718012, mismatch: 0, identity: 1.0

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
********************

9. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 5172305-5172324, mismatch: 0, identity: 1.0

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
********************

10. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 3882469-3882488, mismatch: 1, identity: 0.95

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
**************.*****

11. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 3882508-3882527, mismatch: 1, identity: 0.95

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
**************.*****

12. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 3908692-3908711, mismatch: 1, identity: 0.95

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
**************.*****

13. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 4717993-4718012, mismatch: 1, identity: 0.95

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
**************.*****

14. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 5172305-5172324, mismatch: 1, identity: 0.95

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
**************.*****

15. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 3332337-3332356, mismatch: 1, identity: 0.95

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
**************.*****

16. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 3929906-3929925, mismatch: 1, identity: 0.95

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcaccgg	Protospacer
**************.*****

17. spacer 5.2|4532687|18|NZ_CP009754|CRT matches to position: 6380713-6380730, mismatch: 1, identity: 0.944

caccgccggaggcaaacg	CRISPR spacer
caccgccggaagcaaacg	Protospacer
**********.*******

18. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 3908653-3908672, mismatch: 1, identity: 0.95

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
***************** **

19. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 4532609-4532628, mismatch: 1, identity: 0.95

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
***************** **

20. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 4717915-4717934, mismatch: 1, identity: 0.95

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
***************** **

21. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 5172344-5172363, mismatch: 1, identity: 0.95

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
***************** **

22. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 6259716-6259735, mismatch: 1, identity: 0.95

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccaaacccgcaccgg	Protospacer
*******.************

23. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 6380796-6380815, mismatch: 1, identity: 0.95

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
***************** **

24. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 6394211-6394230, mismatch: 1, identity: 0.95

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
***************** **

25. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 2532079-2532098, mismatch: 2, identity: 0.9

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccaaacccgtacagg	Protospacer
*******.********* **

26. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 3908653-3908672, mismatch: 2, identity: 0.9

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
**************.** **

27. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 4717915-4717934, mismatch: 2, identity: 0.9

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
**************.** **

28. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 5172344-5172363, mismatch: 2, identity: 0.9

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
**************.** **

29. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 6259716-6259735, mismatch: 2, identity: 0.9

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccaaacccgcaccgg	Protospacer
*******.******.*****

30. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 6380796-6380815, mismatch: 2, identity: 0.9

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
**************.** **

31. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 6394211-6394230, mismatch: 2, identity: 0.9

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
**************.** **

32. spacer 5.1|4532648|20|NZ_CP009754|CRT matches to position: 4532609-4532628, mismatch: 2, identity: 0.9

ccccaccgaacccgtaccgg	CRISPR spacer
ccccaccgaacccgcacagg	Protospacer
**************.** **

33. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 1546193-1546212, mismatch: 2, identity: 0.9

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaaccggcgccgg	Protospacer
************ **.****

34. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 2532186-2532205, mismatch: 2, identity: 0.9

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaatccgcacagg	Protospacer
**********.****** **

35. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 4717954-4717973, mismatch: 2, identity: 0.9

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcgcagg	Protospacer
***************.* **

36. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to position: 5810645-5810664, mismatch: 2, identity: 0.9

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaccacgcaccgg	Protospacer
********* * ********

CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP009754_5 5.3|4532724|20|NZ_CP009754|CRT 4532724-4532743 20 NZ_CP045327 Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence 35304-35323 1 0.95

1. spacer 5.3|4532724|20|NZ_CP009754|CRT matches to NZ_CP045327 (Mycobacterium sp. THAF192 plasmid pTHAF192_b, complete sequence) position: , mismatch: 1, identity: 0.95

ccccaccgaacccgcaccgg	CRISPR spacer
ccccaccgaacccgcaccgc	Protospacer
******************* 

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 1702287 : 1708617 9 uncultured_virus(16.67%) NA NA
DBSCAN-SWA_2 3620633 : 3637819 12 Streptomyces_phage(72.73%) tail NA
DBSCAN-SWA_3 4637948 : 4647986 11 Mycobacterium_phage(25.0%) NA NA
DBSCAN-SWA_4 4664581 : 4681198 13 Streptomyces_phage(87.5%) NA NA
DBSCAN-SWA_5 5814441 : 5855644 28 Agrobacterium_phage(33.33%) protease,integrase,tRNA attL 5811370:5811387|attR 5840552:5840569
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage