CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP026060	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed1, complete sequence	0 crisprs	NA	0	0
NZ_CP026059	Proteus mirabilis strain FDAARGOS_80 chromosome, complete genome	1 crisprs	DEDDh,c2c9_V-U4,WYL,cas3,DinG,PD-DExK,csa3	0	7
NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	1 crisprs	NA	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP026061_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP026061_1

2374-2637

Orphan

Consensus_repeat	Method
GTGTGTAAATCCCGATA	PILER-CR
ACTGTCGTGTGTAAATCCCGATAT	CRISPRCasFinder

3 spacers

The CRISPR arrays of NZ_CP026061_1

>merge|NZ_CP026061|1|2374-2637|PILER-CR,CRISPRCasFinder
GTGTGTAAATCCCGAATCGCTGTTTGAAATTTGTACAGTAATTATTTCGTTTTTTGTGTGTAAATCCCGATAATCAAGAGTAAATCAACTCTTGATTATGTTCCTATTTTTTTTAGTCAAAATAGTCTTGACTGTCGTGTGTAAATCCCGATATATTGTGTGCAAATCCCGATGTTTTTTGTGTTGATATTGTAACTACTGTGTGTGTAAATCCCGATATTTCGTGATCATCGTATGAATTTATTTGTGTGTGAATCCCGATAA

>NZ_CP026061|1|1|2374-2592|PILER-CR
GTGTGTAAATCCCGAAT	CGCTGTTTGAAATTTGTACAGTAATTATTTCGTTTTTT
GTGTGTAAATCCCGATA	ATCAAGAGTAAATCAACTCTTGATTATGTTCCTATTTTTTTTAGTCAAAATAGTCTTGACTGTC
GTGTGTAAATCCCGATA	TATTGTGTGCAAATCCCGATGTTTTTTGTGTTGATATTGTAACTACTGT
GTGTGTAAATCCCGATA

>NZ_CP026061|1|1|2423-2637|CRISPRCasFinder
TTTTTTGTGTGTAAATCCCGATAA	TCAAGAGTAAATCAACTCTTGATTATGTTCCTATTTTTTTTAGTCAAAATAGTCTTG
ACTGTCGTGTGTAAATCCCGATAT	ATTGTGTGCAAATCCCGATGTTTTTTGTGTTGATATTGTAAC
TACTGTGTGTGTAAATCCCGATAT	TTCGTGATCATCGTATGAAT
TTATTTGTGTGTGAATCCCGATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP026061.1\|WP_036896414.1\|1193_1709_-\|J-domain-containing-protein	unknown	unknown	gnl\|CDD\|197617
NZ_CP026061.1\|WP_036896424.1\|5140_5422_-\|ribbon-helix-helix-protein,-CopG-family	unknown	unknown	gnl\|CDD\|279710
NZ_CP026061.1\|WP_012368891.1\|8249_9716_-\|putative-colicin	unknown	unknown	gnl\|CDD\|334348
NZ_CP026061.1\|WP_012368892.1\|7651_8170_+\|colicin-immunity-protein-Cui	unknown	unknown	gnl\|CDD\|367697
NZ_CP026061.1\|WP_049195517.1\|3626_4031_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026061.1\|WP_036896412.1\|585_1143_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026061.1\|WP_036896417.1\|2660_3617_+\|replication-initiator-protein-A	unknown	unknown	gnl\|CDD\|370826
NZ_CP026061.1\|WP_012368893.1\|7208_7511_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	unknown	unknown	gnl\|CDD\|226194
NZ_CP026061.1\|WP_036896410.1\|181_412_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026061.1\|WP_036896419.1\|4576_4780_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026061.1\|WP_153274249.1\|424_583_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026061.1\|WP_036896426.1\|5665_6319_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|349760
NZ_CP026061.1\|WP_049195411.1\|4126_4492_+\|DUF2726-domain-containing-protein	unknown	unknown	gnl\|CDD\|371282
NZ_CP026061.1\|WP_012368894.1\|6936_7200_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	unknown	unknown	gnl\|CDD\|376852

Protein	Function_ID	Function_description	E-value
NZ_CP026061.1\|WP_036896417.1\|2660_3617_+\|replication-initiator-protein-A	gnl\|CDD\|370826	pfam10134, RPA, Replication initiator protein A. Members of this family of bacterial proteins are single-stranded DNA binding proteins that are involved in DNA replication, repair and recombination.	4.86953e-91
NZ_CP026061.1\|WP_012368893.1\|7208_7511_+\|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin	gnl\|CDD\|226194	COG3668, ParE, Plasmid stabilization system protein [General function prediction only].	9.71059e-14
NZ_CP026061.1\|WP_036896414.1\|1193_1709_-\|J-domain-containing-protein	gnl\|CDD\|197617	smart00271, DnaJ, DnaJ molecular chaperone homology domain.	1.01469e-11
NZ_CP026061.1\|WP_036896424.1\|5140_5422_-\|ribbon-helix-helix-protein,-CopG-family	gnl\|CDD\|279710	pfam01402, RHH_1, Ribbon-helix-helix protein, copG family. The structure of this protein repressor, which is the shortest reported to date and the first isolated from a plasmid, has a homodimeric ribbon-helix-helix arrangement. The helix-turn-helix-like structure is involved in dimerization and not DNA binding as might have been expected.	0.00798589
NZ_CP026061.1\|WP_036896426.1\|5665_6319_-\|AAA-family-ATPase	gnl\|CDD\|349760	cd02042, ParAB_family, partition proteins ParAB family. ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.	1.65773e-21
NZ_CP026061.1\|WP_012368892.1\|7651_8170_+\|colicin-immunity-protein-Cui	gnl\|CDD\|367697	pfam03857, Colicin_im, Colicin immunity protein. Colicin immunity proteins are plasmid-encoded proteins necessary for protecting the cell against colicins. Colicins are toxins released by bacteria during times of stress.	2.29694e-07
NZ_CP026061.1\|WP_049195411.1\|4126_4492_+\|DUF2726-domain-containing-protein	gnl\|CDD\|371282	pfam10881, DUF2726, Protein of unknown function (DUF2726). This bacterial family of proteins has no known function.	3.50794e-09
NZ_CP026061.1\|WP_012368894.1\|6936_7200_+\|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin	gnl\|CDD\|376852	pfam02604, PhdYeFM_antitox, Antitoxin Phd_YefM, type II toxin-antitoxin system. Members of this family act as antitoxins in type II toxin-antitoxin systems. When bound to their toxin partners, they can bind DNA via the N-terminus and repress the expression of operons containing genes encoding the toxin and the antitoxin. This domain complexes with Txe toxins containing pfam06769, Fic/DOC toxins containing pfam02661 and YafO toxins containing pfam13957.	2.57284e-11
NZ_CP026061.1\|WP_012368891.1\|8249_9716_-\|putative-colicin	gnl\|CDD\|334348	pfam01024, Colicin, Colicin pore forming domain.	2.59688e-83

>NZ_CP026061.1|WP_036896414.1|1193_1709_-|J-domain-containing-protein
MNVQEALNIFGLSGELTEQDIKTAYKKAALKYHPDRNPLGAELMKAINAAFDFLMNNLENINKFQSSDKNTHYNFTEELEEVLLTLSGLMGIIYEVIGNWVWISGETKEHKDTLKEIGCKWAAKKKQWFYRPEEHKSRRNRKEHSIDEIRTMYGTNGQRAATGWQRVENRA
>NZ_CP026061.1|WP_036896412.1|585_1143_-|hypothetical-protein
MKNFNECYQSVFEIVCRCLGDNWRINLLDNDAYRIKITSNRFMGFSIHVREEKNRFSIMGSFDSRIHRGEIHSCTVSKDRNPVHIAEDIKRKIIVFAHDEINKAKESKVKEQEKKEQDLIVKNMLSRLFTMHSSWQSGVIGAFKSDNGLDGMIRKTYSGYKIEIDKLSVDNLIKLAGMITTLERG
>NZ_CP026061.1|WP_153274249.1|424_583_-|hypothetical-protein
MEIKRENFDSVFDINKWLKNNKDVKIINIETRKGNITDFTNSYTVWFYVGSY
>NZ_CP026061.1|WP_036896410.1|181_412_-|hypothetical-protein
MIKLSKGSKNYYLTRENGQLVFIKNIKVRNKNDVKDGNKTAKKQVYKIIVGIDLLPDEADRSILKSMLEQWKSEYE
>NZ_CP026061.1|WP_036896417.1|2660_3617_+|replication-initiator-protein-A
MKTLRPKKYKEEEFFIADEVEISSFRDELASMEHPFFALKGGDDKVREYRNNNISVLVRPATGIGLATVFDKDIWIYAISKLQQAIFEGKPISRTIAFTPYEFFVTTNRDKGGRSYDELKKALERLAGTRIQTNIVYSSEKQETENFGLIDKWRILEEKKGRLDIGMVEVTLPDWLYQGITKNKVLKINSDYFRIRKAIDRRIYEIARKHCGYQKSFSLSIELLHLKSGATSNKREFKRSIKKLSLVNDLPDYEVLLDAENDCVTFTNRHFDESLEKKMNQLAKNKNMIEEVVSNGKLPKKLQKKVATIADKISKEKR
>NZ_CP026061.1|WP_049195517.1|3626_4031_+|hypothetical-protein
MAKIYQFPQGKEKKEIQAKLKKSRSVKIKKDIKKSSLSHILSMLFLGIRYFLGVTLDVLLLMVVSIISVFRYLIIPLGIFALILFYYNNEKMWNVEMTVTMALMVSSLINPEVLQDIQPFQTLFGVKSPQSEAK
>NZ_CP026061.1|WP_049195411.1|4126_4492_+|DUF2726-domain-containing-protein
MSYLRQQFLTEEESKLLVILQENVKENYHVFCKVRLSEFLYSSQKMGTSEFFNEFEIINSINLPFAIYDTLENQLVAAISYINPIEKSNLLENQDIKVIHLTMLKDTLTNGELSMFYSDSV
>NZ_CP026061.1|WP_036896419.1|4576_4780_-|hypothetical-protein
MKQLTEFELEIIHAVVVLQELHDKPELSASVLKECNLSEIDCNELDDYEKDNLRIINKEYLVNLKGL
>NZ_CP026061.1|WP_036896424.1|5140_5422_-|ribbon-helix-helix-protein,-CopG-family
MKLQKPDLDLTDSSTKTKNSTTQFIKAGDKRPTTSNKLIPSTFRLPESAISILDTEAERAGQNKTAILKAAILAYSNLDENSKNLALLESFKL
>NZ_CP026061.1|WP_036896426.1|5665_6319_-|AAA-family-ATPase
MILVFASDKGGVGKTTTAINMAVMLKRKNKSVIMLKADRNRDLFVWSDIRAQAGFSAIPIHETFGNISDEIKRLEKLCDVVVVDCAGHDSSEFRSALTVADVLLTLVKPSSSLEKNTLTNVTKTVRTAQKQHGNSDLKAHVLMTRIKSHKLQDAVSLENELKSDEIWLQPLKNRISELDIFENAVNAGVGVHEVEKASSLGVAKAQIELIAKEIGLI
>NZ_CP026061.1|WP_012368894.1|6936_7200_+|type-II-toxin-antitoxin-system-Phd/YefM-family-antitoxin
MEIIPAQLAKNQFGDLLMKAQREPVQISKHGKRVAVVISPDEYDQFTQLKLQNLKSILAESIEQAERGELHHIDDVFAPLTSNEIEG
>NZ_CP026061.1|WP_012368893.1|7208_7511_+|type-II-toxin-antitoxin-system-RelE/ParE-family-toxin
MSVLFTKKAKEHIRTIRRYSLTHWGKNVAETYINCLRITIINIIEKQPSIGIDRSDDLFTGIRSFPVESHIIYYREVENGIEVLAVLHQSQDPYIHIKRD
>NZ_CP026061.1|WP_012368892.1|7651_8170_+|colicin-immunity-protein-Cui
MDNKNHPNDHLLIKWGSIFIFISAIPIFIIFYFNDIDILFAVYEKINNIPSTYSSTYPIISKLSFFYCKLSPLIVLLFFIFCYKKLTLVKPIPINKLIINVIFPCLVITIISLYVLYFYNTDISDSGWSILKTISSNKHLLFGYYIAIFLGYYVWLFLFFISFIYLPFKSIR
>NZ_CP026061.1|WP_012368891.1|8249_9716_-|putative-colicin
MSKNNHSAETDHLSVTADRPSKGDLGSGPVGKGDGGDRNIISLSDPNASFSYTTSTIEGLEGLNFTVTVHGARIINPQNGHTTNNIEVDGKGNSVDYKKNNVQNNQLELPIPYNNKLARDRDLGRLTSRIRKDYFDLKNNKARVSIYNGHYIHTVTFDDAGNVQNISEEYIEKTYNRYSKGIPNEKKDRLEEVKRFAILGYKTEPSNILDYNVKIKEYEFIFTLNKLGFIEKFSKKIIKASQYESRQLNAFYKDLNIEQDEKKENLAKLMVVNAYQSYPQNKKFIQDAEKEALMGAADIITNTGEKISKHLGEKYKTIANEIASDLRNFQGKKLRSLSDALKMMEKINRNPNIKIKQADRVVLANAVRHVDTKILSENFQRLGKSFGVLGKVLSVEKLREKAAIGFETGNWKPLMLEVEAMIISGYATGIAISIAISFISSIASFLAIGALPTTLAIIATIMLISYLASLIDDKVVDKINNLLIPEAH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP026061_1	1.1\|2391\|38\|NZ_CP026061\|PILER-CR	2391-2428	38	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	42922-42959	0	1.0
NZ_CP026061_1	1.1\|2391\|38\|NZ_CP026061\|PILER-CR	2391-2428	38	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2391-2428	0	1.0
NZ_CP026061_1	1.1\|2391\|38\|NZ_CP026061\|PILER-CR	2391-2428	38	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11537-11574	0	1.0
NZ_CP026061_1	1.1\|2391\|38\|NZ_CP026061\|PILER-CR	2391-2428	38	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12546-12583	0	1.0
NZ_CP026061_1	1.1\|2391\|38\|NZ_CP026061\|PILER-CR	2391-2428	38	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	36013-36050	0	1.0
NZ_CP026061_1	1.3\|2527\|49\|NZ_CP026061\|PILER-CR	2527-2575	49	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11390-11438	0	1.0
NZ_CP026061_1	1.3\|2527\|49\|NZ_CP026061\|PILER-CR	2527-2575	49	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7118-7166	0	1.0
NZ_CP026061_1	1.3\|2527\|49\|NZ_CP026061\|PILER-CR	2527-2575	49	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	43058-43106	0	1.0
NZ_CP026061_1	1.3\|2527\|49\|NZ_CP026061\|PILER-CR	2527-2575	49	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2527-2575	0	1.0
NZ_CP026061_1	1.3\|2527\|49\|NZ_CP026061\|PILER-CR	2527-2575	49	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12682-12730	0	1.0
NZ_CP026061_1	1.3\|2527\|49\|NZ_CP026061\|PILER-CR	2527-2575	49	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	90-138	0	1.0
NZ_CP026061_1	1.4\|2447\|57\|NZ_CP026061\|CRISPRCasFinder	2447-2503	57	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	42978-43034	0	1.0
NZ_CP026061_1	1.4\|2447\|57\|NZ_CP026061\|CRISPRCasFinder	2447-2503	57	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2447-2503	0	1.0
NZ_CP026061_1	1.4\|2447\|57\|NZ_CP026061\|CRISPRCasFinder	2447-2503	57	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11462-11518	0	1.0
NZ_CP026061_1	1.4\|2447\|57\|NZ_CP026061\|CRISPRCasFinder	2447-2503	57	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7190-7246	0	1.0
NZ_CP026061_1	1.4\|2447\|57\|NZ_CP026061\|CRISPRCasFinder	2447-2503	57	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12602-12658	0	1.0
NZ_CP026061_1	1.4\|2447\|57\|NZ_CP026061\|CRISPRCasFinder	2447-2503	57	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	10-66	0	1.0
NZ_CP026061_1	1.5\|2528\|42\|NZ_CP026061\|CRISPRCasFinder	2528-2569	42	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	43059-43100	0	1.0
NZ_CP026061_1	1.5\|2528\|42\|NZ_CP026061\|CRISPRCasFinder	2528-2569	42	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2528-2569	0	1.0
NZ_CP026061_1	1.5\|2528\|42\|NZ_CP026061\|CRISPRCasFinder	2528-2569	42	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11396-11437	0	1.0
NZ_CP026061_1	1.5\|2528\|42\|NZ_CP026061\|CRISPRCasFinder	2528-2569	42	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7124-7165	0	1.0
NZ_CP026061_1	1.5\|2528\|42\|NZ_CP026061\|CRISPRCasFinder	2528-2569	42	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12683-12724	0	1.0
NZ_CP026061_1	1.5\|2528\|42\|NZ_CP026061\|CRISPRCasFinder	2528-2569	42	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	91-132	0	1.0
NZ_CP026061_1	1.6\|2594\|20\|NZ_CP026061\|CRISPRCasFinder	2594-2613	20	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11352-11371	0	1.0
NZ_CP026061_1	1.6\|2594\|20\|NZ_CP026061\|CRISPRCasFinder	2594-2613	20	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7080-7099	0	1.0
NZ_CP026061_1	1.6\|2594\|20\|NZ_CP026061\|CRISPRCasFinder	2594-2613	20	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	43125-43144	0	1.0
NZ_CP026061_1	1.6\|2594\|20\|NZ_CP026061\|CRISPRCasFinder	2594-2613	20	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2594-2613	0	1.0
NZ_CP026061_1	1.6\|2594\|20\|NZ_CP026061\|CRISPRCasFinder	2594-2613	20	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12749-12768	0	1.0
NZ_CP026061_1	1.6\|2594\|20\|NZ_CP026061\|CRISPRCasFinder	2594-2613	20	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	157-176	0	1.0
NZ_CP026061_1	1.1\|2391\|38\|NZ_CP026061\|PILER-CR	2391-2428	38	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7265-7302	1	0.974
NZ_CP026061_1	1.2\|2446\|64\|NZ_CP026061\|PILER-CR	2446-2509	64	NZ_KX832926	Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence	42977-43040	4	0.938
NZ_CP026061_1	1.2\|2446\|64\|NZ_CP026061\|PILER-CR	2446-2509	64	NZ_CP026061	Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence	2446-2509	4	0.938
NZ_CP026061_1	1.2\|2446\|64\|NZ_CP026061\|PILER-CR	2446-2509	64	NZ_CP029129	Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence	11456-11519	4	0.938
NZ_CP026061_1	1.2\|2446\|64\|NZ_CP026061\|PILER-CR	2446-2509	64	NZ_CP021855	Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence	7184-7247	4	0.938
NZ_CP026061_1	1.2\|2446\|64\|NZ_CP026061\|PILER-CR	2446-2509	64	NZ_MK941846	Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence	12601-12664	4	0.938
NZ_CP026061_1	1.2\|2446\|64\|NZ_CP026061\|PILER-CR	2446-2509	64	NZ_MF150117	Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence	9-72	4	0.938

1. spacer 1.1|2391|38|NZ_CP026061|PILER-CR matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 0, identity: 1.0

cgctgtttgaaatttgtacagtaattatttcgtttttt	CRISPR spacer
cgctgtttgaaatttgtacagtaattatttcgtttttt	Protospacer
**************************************

2. spacer 1.1|2391|38|NZ_CP026061|PILER-CR matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

cgctgtttgaaatttgtacagtaattatttcgtttttt	CRISPR spacer
cgctgtttgaaatttgtacagtaattatttcgtttttt	Protospacer
**************************************

3. spacer 1.1|2391|38|NZ_CP026061|PILER-CR matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

cgctgtttgaaatttgtacagtaattatttcgtttttt	CRISPR spacer
cgctgtttgaaatttgtacagtaattatttcgtttttt	Protospacer
**************************************

4. spacer 1.1|2391|38|NZ_CP026061|PILER-CR matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 0, identity: 1.0

cgctgtttgaaatttgtacagtaattatttcgtttttt	CRISPR spacer
cgctgtttgaaatttgtacagtaattatttcgtttttt	Protospacer
**************************************

5. spacer 1.1|2391|38|NZ_CP026061|PILER-CR matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 0, identity: 1.0

cgctgtttgaaatttgtacagtaattatttcgtttttt	CRISPR spacer
cgctgtttgaaatttgtacagtaattatttcgtttttt	Protospacer
**************************************

6. spacer 1.3|2527|49|NZ_CP026061|PILER-CR matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	CRISPR spacer
tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	Protospacer
*************************************************

7. spacer 1.3|2527|49|NZ_CP026061|PILER-CR matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	CRISPR spacer
tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	Protospacer
*************************************************

8. spacer 1.3|2527|49|NZ_CP026061|PILER-CR matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 0, identity: 1.0

tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	CRISPR spacer
tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	Protospacer
*************************************************

9. spacer 1.3|2527|49|NZ_CP026061|PILER-CR matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	CRISPR spacer
tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	Protospacer
*************************************************

10. spacer 1.3|2527|49|NZ_CP026061|PILER-CR matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 0, identity: 1.0

tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	CRISPR spacer
tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	Protospacer
*************************************************

11. spacer 1.3|2527|49|NZ_CP026061|PILER-CR matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 0, identity: 1.0

tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	CRISPR spacer
tattgtgtgcaaatcccgatgttttttgtgttgatattgtaactactgt	Protospacer
*************************************************

12. spacer 1.4|2447|57|NZ_CP026061|CRISPRCasFinder matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 0, identity: 1.0

tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	CRISPR spacer
tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	Protospacer
*********************************************************

13. spacer 1.4|2447|57|NZ_CP026061|CRISPRCasFinder matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	CRISPR spacer
tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	Protospacer
*********************************************************

14. spacer 1.4|2447|57|NZ_CP026061|CRISPRCasFinder matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	CRISPR spacer
tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	Protospacer
*********************************************************

15. spacer 1.4|2447|57|NZ_CP026061|CRISPRCasFinder matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	CRISPR spacer
tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	Protospacer
*********************************************************

16. spacer 1.4|2447|57|NZ_CP026061|CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 0, identity: 1.0

tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	CRISPR spacer
tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	Protospacer
*********************************************************

17. spacer 1.4|2447|57|NZ_CP026061|CRISPRCasFinder matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 0, identity: 1.0

tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	CRISPR spacer
tcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttg	Protospacer
*********************************************************

18. spacer 1.5|2528|42|NZ_CP026061|CRISPRCasFinder matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 0, identity: 1.0

attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	CRISPR spacer
attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	Protospacer
******************************************

19. spacer 1.5|2528|42|NZ_CP026061|CRISPRCasFinder matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	CRISPR spacer
attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	Protospacer
******************************************

20. spacer 1.5|2528|42|NZ_CP026061|CRISPRCasFinder matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	CRISPR spacer
attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	Protospacer
******************************************

21. spacer 1.5|2528|42|NZ_CP026061|CRISPRCasFinder matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	CRISPR spacer
attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	Protospacer
******************************************

22. spacer 1.5|2528|42|NZ_CP026061|CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 0, identity: 1.0

attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	CRISPR spacer
attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	Protospacer
******************************************

23. spacer 1.5|2528|42|NZ_CP026061|CRISPRCasFinder matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 0, identity: 1.0

attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	CRISPR spacer
attgtgtgcaaatcccgatgttttttgtgttgatattgtaac	Protospacer
******************************************

24. spacer 1.6|2594|20|NZ_CP026061|CRISPRCasFinder matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgtgatcatcgtatgaat	CRISPR spacer
ttcgtgatcatcgtatgaat	Protospacer
********************

25. spacer 1.6|2594|20|NZ_CP026061|CRISPRCasFinder matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgtgatcatcgtatgaat	CRISPR spacer
ttcgtgatcatcgtatgaat	Protospacer
********************

26. spacer 1.6|2594|20|NZ_CP026061|CRISPRCasFinder matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgtgatcatcgtatgaat	CRISPR spacer
ttcgtgatcatcgtatgaat	Protospacer
********************

27. spacer 1.6|2594|20|NZ_CP026061|CRISPRCasFinder matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgtgatcatcgtatgaat	CRISPR spacer
ttcgtgatcatcgtatgaat	Protospacer
********************

28. spacer 1.6|2594|20|NZ_CP026061|CRISPRCasFinder matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgtgatcatcgtatgaat	CRISPR spacer
ttcgtgatcatcgtatgaat	Protospacer
********************

29. spacer 1.6|2594|20|NZ_CP026061|CRISPRCasFinder matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 0, identity: 1.0

ttcgtgatcatcgtatgaat	CRISPR spacer
ttcgtgatcatcgtatgaat	Protospacer
********************

30. spacer 1.1|2391|38|NZ_CP026061|PILER-CR matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 1, identity: 0.974

cgctgtttgaaatttgtacagtaattatttcgtttttt	CRISPR spacer
cgctgtttgatatttgtacagtaattatttcgtttttt	Protospacer
********** ***************************

31. spacer 1.2|2446|64|NZ_CP026061|PILER-CR matches to NZ_KX832926 (Providencia rettgeri strain 16pre36 plasmid p16Pre36-1, complete sequence) position: , mismatch: 4, identity: 0.938

atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	CRISPR spacer
atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	Protospacer
************************************************************

32. spacer 1.2|2446|64|NZ_CP026061|PILER-CR matches to NZ_CP026061 (Proteus mirabilis strain FDAARGOS_80 plasmid unnamed2, complete sequence) position: , mismatch: 4, identity: 0.938

atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	CRISPR spacer
atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	Protospacer
************************************************************

33. spacer 1.2|2446|64|NZ_CP026061|PILER-CR matches to NZ_CP029129 (Proteus mirabilis strain AR379 plasmid unnamed1, complete sequence) position: , mismatch: 4, identity: 0.938

atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	CRISPR spacer
atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	Protospacer
************************************************************

34. spacer 1.2|2446|64|NZ_CP026061|PILER-CR matches to NZ_CP021855 (Proteus mirabilis strain AR_0156 plasmid unitig_3, complete sequence) position: , mismatch: 4, identity: 0.938

atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	CRISPR spacer
atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	Protospacer
************************************************************

35. spacer 1.2|2446|64|NZ_CP026061|PILER-CR matches to NZ_MK941846 (Proteus mirabilis strain PM1157 plasmid pOXA-23, complete sequence) position: , mismatch: 4, identity: 0.938

atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	CRISPR spacer
atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	Protospacer
************************************************************

36. spacer 1.2|2446|64|NZ_CP026061|PILER-CR matches to NZ_MF150117 (Proteus mirabilis strain A64421 plasmid pPM64421b, complete sequence) position: , mismatch: 4, identity: 0.938

atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	CRISPR spacer
atcaagagtaaatcaactcttgattatgttcctattttttttagtcaaaatagtcttgac	Protospacer
************************************************************

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP026059_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP026059_1

2668240-2668382

Orphan

Consensus_repeat	Method
GGTGATATCAATTTCACAGGTGG	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP026059_1

>merge|NZ_CP026059|1|2668240-2668382|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGGTGGCGCTGGTAATGTCATTAAATCTGATGTTACACAAGGTGATATCAATTTTACAGGTGGCGGCATAGCAAATGTAATAAAACATAACTCTAATTATGGTAATACCAACTTTACTGGTGG

>NZ_CP026059|1|1|2668240-2668382|CRISPRCasFinder
GGTGATATCAATTTCACAGGTGG	TGGCGCTGGTAATGTCATTAAATCTGATGTTACACAA
GGTGATATCAATTTTACAGGTGG	CGGCATAGCAAATGTAATAAAACATAACTCTAATTAT
GGTAATACCAACTTTACTGGTGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP026059.1\|WP_012368228.1\|2689064_2689508_+\|prepilin-peptidase-dependent-pilin	unknown	unknown	gnl\|CDD\|236718
NZ_CP026059.1\|WP_004250359.1\|2689606_2690710_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	unknown	unknown	gnl\|CDD\|236694
NZ_CP026059.1\|WP_036895460.1\|2682461_2684372_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	unknown	unknown	gnl\|CDD\|236999
NZ_CP026059.1\|WP_036896159.1\|2687214_2687985_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	unknown	unknown	gnl\|CDD\|181879
NZ_CP026059.1\|WP_004244066.1\|2662364_2662736_-\|YacL-family-protein	unknown	unknown	gnl\|CDD\|235372
NZ_CP026059.1\|WP_103429231.1\|2662906_2665504_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	unknown	unknown	gnl\|CDD\|236424
NZ_CP026059.1\|WP_017627935.1\|2688311_2688854_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	unknown	unknown	gnl\|CDD\|236984
NZ_CP026059.1\|WP_004244060.1\|2658910_2659132_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026059.1\|WP_004244059.1\|2657808_2658708_+\|LysR-family-transcriptional-regulator-ArgP	unknown	unknown	gnl\|CDD\|235144
NZ_CP026059.1\|WP_004244072.1\|2666324_2666528_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026059.1\|WP_012368229.1\|2690706_2691906_+\|type-II-secretion-system-F-family-protein	unknown	unknown	gnl\|CDD\|182559
NZ_CP026059.1\|WP_004248539.1\|2661412_2662273_-\|small-conductance-mechanosensitive-channel-MscS	unknown	unknown	gnl\|CDD\|182386
NZ_CP026059.1\|WP_004244077.1\|2680832_2682260_-\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|180579
NZ_CP026059.1\|WP_004244061.1\|2659199_2659628_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026059.1\|WP_004244063.1\|2660620_2661244_-\|arginine-exporter-ArgO	unknown	unknown	gnl\|CDD\|236463
NZ_CP026059.1\|WP_004244087.1\|2692183_2692798_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP026059.1\|WP_004248541.1\|2666177_2666324_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP026059.1\|WP_004248538.1\|2659795_2660530_-\|oxidative-stress-defense-protein	unknown	unknown	gnl\|CDD\|236840
NZ_CP026059.1\|WP_004244080.1\|2684384_2687051_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	unknown	unknown	gnl\|CDD\|236500
NZ_CP026059.1\|WP_004244089.1\|2692800_2693553_+\|cell-division-protein-ZapD	unknown	unknown	gnl\|CDD\|235389

Protein	Function_ID	Function_description	E-value
NZ_CP026059.1\|WP_012368228.1\|2689064_2689508_+\|prepilin-peptidase-dependent-pilin	gnl\|CDD\|236718	PRK10574, PRK10574, putative major pilin subunit; Provisional.	4.00304e-55
NZ_CP026059.1\|WP_004244087.1\|2692183_2692798_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	7.55125e-90
NZ_CP026059.1\|WP_004250359.1\|2689606_2690710_+\|Flp-pilus-assembly-complex-ATPase-component-TadA	gnl\|CDD\|236694	PRK10436, PRK10436, hypothetical protein; Provisional.	5.50551e-180
NZ_CP026059.1\|WP_036896159.1\|2687214_2687985_-\|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR	gnl\|CDD\|181879	PRK09464, pdhR, pyruvate dehydrogenase complex transcriptional repressor PdhR.	1.92674e-168
NZ_CP026059.1\|WP_004244066.1\|2662364_2662736_-\|YacL-family-protein	gnl\|CDD\|235372	PRK05248, PRK05248, hypothetical protein; Provisional.	9.00597e-61
NZ_CP026059.1\|WP_017627935.1\|2688311_2688854_-\|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD	gnl\|CDD\|236984	PRK11789, PRK11789, 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD.	1.2681e-131
NZ_CP026059.1\|WP_004244059.1\|2657808_2658708_+\|LysR-family-transcriptional-regulator-ArgP	gnl\|CDD\|235144	PRK03635, PRK03635, ArgP/LysG family DNA-binding transcriptional regulator.	1.29397e-161
NZ_CP026059.1\|WP_103429231.1\|2662906_2665504_-\|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase	gnl\|CDD\|236424	PRK09238, PRK09238, bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Validated.	0
NZ_CP026059.1\|WP_012368229.1\|2690706_2691906_+\|type-II-secretion-system-F-family-protein	gnl\|CDD\|182559	PRK10573, PRK10573, protein transport protein HofC.	9.16478e-109
NZ_CP026059.1\|WP_004248539.1\|2661412_2662273_-\|small-conductance-mechanosensitive-channel-MscS	gnl\|CDD\|182386	PRK10334, PRK10334, small-conductance mechanosensitive channel MscS.	6.51737e-120
NZ_CP026059.1\|WP_004244077.1\|2680832_2682260_-\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|180579	PRK06467, PRK06467, dihydrolipoamide dehydrogenase; Reviewed.	0
NZ_CP026059.1\|WP_036895460.1\|2682461_2684372_-\|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase	gnl\|CDD\|236999	PRK11854, aceF, pyruvate dehydrogenase dihydrolipoyltransacetylase; Validated.	0
NZ_CP026059.1\|WP_004244063.1\|2660620_2661244_-\|arginine-exporter-ArgO	gnl\|CDD\|236463	PRK09304, PRK09304, arginine exporter ArgO.	1.63858e-119
NZ_CP026059.1\|WP_004248538.1\|2659795_2660530_-\|oxidative-stress-defense-protein	gnl\|CDD\|236840	PRK11087, PRK11087, oxidative stress defense protein; Provisional.	6.92322e-114
NZ_CP026059.1\|WP_004244080.1\|2684384_2687051_-\|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type	gnl\|CDD\|236500	PRK09405, aceE, pyruvate dehydrogenase subunit E1; Reviewed.	0
NZ_CP026059.1\|WP_004244089.1\|2692800_2693553_+\|cell-division-protein-ZapD	gnl\|CDD\|235389	PRK05287, PRK05287, cell division protein ZapD.	9.25043e-119

>NZ_CP026059.1|WP_004244072.1|2666324_2666528_+|hypothetical-protein
MIHIPASGFIYMASIIKSMLENPCINKEFEKLIAADLLPILQNETNMTENFTALHLIKKTNNRRIIL
>NZ_CP026059.1|WP_004248541.1|2666177_2666324_+|hypothetical-protein
MAINEKFVQEISSINYNNSIFSLYFVGQDPHKIAQGIMPEKDEELALK
>NZ_CP026059.1|WP_103429231.1|2662906_2665504_-|bifunctional-aconitate-hydratase-2/2-methylisocitrate-dehydratase
MLEEYRKHVAERAAEGVVPKPLDATQTAALVELLKSPPKGEEEFLLDLIVNRVPPGVDEAAYVKAGFLTALAKGETTSPLITPEKAVELLGTMQGGYNIHALIEALDNDKLAPIAAKALSHTLLMFDSFYDVEEKAKAGNVYAKQIMQSWADGEWFTERPELAEKITVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPSSVGPIKQIEALNKKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPYVPNKRGGGVVLGGKIAPIFFNTMEDAGALPIEVDVSKLNMGDVIDIYPYKGEIRNHETNELLETFALKTEVLIDEVRAGGRIPLIIGRGLTSKARSALGLPPSTLFRHAKAVEQSDRGFSLAQKMVGRACGRDGIRPGEYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPKPVDVTTHHTLPDFIMNRGGVSLRPGDGIIHSWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGVTLRDLVHAIPLYAIKEGLLTVEKKGKKNIFSGRILEIEGLPELKVEQAFELADASAERSAAGCTIKLDKAPIIEYLQSNIVLLKWMIAEGYGDRRTLERRITAMENWLADPQLLEADADAEYAAVIEIDLNEIKEPILCAPNDPDDARLLSEVANSKIDEVFIGSCMTNIGHFRAAGKLLDQHKGQLPTRLWVAPPTKMDAAQLTEEGYYSVFGKSGARIEVPGCSLCMGNQARVADGATVVSTSTRNFPNRLGTGANVYLASAELAAVASLLGRLPEPQEYLDFINKVDETAEDTYRYLNFDQLEQYTDKATQVIFQTTV
>NZ_CP026059.1|WP_004244066.1|2662364_2662736_-|YacL-family-protein
MDYEFQRDLTGGILARFSMDHEAIGYWLNDEIQGDISLIDQILTEMDEVKGSEKQWQLIGKEYSLSIDDEEIMVRANTLHFETDDLEEGMSYYDNESIAFCGLDDFATMLQKYRLFILENRRS
>NZ_CP026059.1|WP_004248539.1|2661412_2662273_-|small-conductance-mechanosensitive-channel-MscS
MNELPASLDEATGWFVANQELFIQYAVNIVAAFLILFIGLFVAKMVSKGVARILTLRHIDATVVTFLSVLVRYTVIAFTLIAVLGRLGVQTASVIAVLGAAGLAVGLALQGSLSNFAAGVLIVIFRPIRAGEYVMIGAVEGTVRDVQIFSTTLRSADDRIIVIPNSKIISSEVINLSREPNRRTQIIVGVAYDADIDKVKKVLGDVVAQDKRIQHNQGVTIRLHEMAPSSLNFVVRVWTTNDDAWPVYWDLMENFKRALDANNIGIPFPQMDVYMHQAQNTVMKAE
>NZ_CP026059.1|WP_004244063.1|2660620_2661244_-|arginine-exporter-ArgO
MLTTFFQGFLLSAAMILPIGAQNAFVLQQGSKKQYHLMSAFLCALSDVILISGGVFGGSALLSQSEYLLLLITWGGVAFLLWYGWNAFKTAFTKEIELSQHKNQVKSRWRVIVTLVAVTWLNPHVYLDTFVVLGSIGGQLSAELRPWFTFGAVFASISWFFALSLLAAWFSPILSQVTAQRIINLFVGCVMWFIALQLAAQGWKNLF
>NZ_CP026059.1|WP_004248538.1|2659795_2660530_-|oxidative-stress-defense-protein
MKVKAMVLASMLALGAPSIALAGAVPEGPHITTSGNATIKATPDMATLNIQVSEKAKDAAQAKKQVDERVAKYFAFLKENGVTKEDIDAANIRTQPNYEYDKKAERSVINGYTATRTVDVKIKKLDQLNTLLDGALAAGLNEINNVEFGVNDPEQYKAKAREVAIKNAIQQASSVAKGFGADLGAVYSVSYRAPEATPYPIARMKMDAMALSAPSPEAVKETYQQQSIEFKDYVDVVFELKTAK
>NZ_CP026059.1|WP_004244061.1|2659199_2659628_+|hypothetical-protein
MADIATLIAKWRNGLEVEIYTENYEFRYGRIKSSRFNASGEESVYYATYFHTRAKPKDNDPFLIITFDPVVGQDDFMFIETIIDHRTYFGSPGAGKTKSHIERRSSDLKRRIENGKKISSEPSSSVQNVNKNNNDSPDQENK
>NZ_CP026059.1|WP_004244060.1|2658910_2659132_+|hypothetical-protein
MSTFIRRSRNVALAIDAGRKSGSANIEGNTPADIQASLLKSLGEFTASIPTTKQQPYVKGSHGANHKKTYFGR
>NZ_CP026059.1|WP_004244059.1|2657808_2658708_+|LysR-family-transcriptional-regulator-ArgP
MKRPDYRALQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENLFGQPLLVRTVPPQPTEQGQKLLALLHQVEMLEEQWLGDENSGSTPLLLSLAVNADSLATWLLPALHPVLTQLPIRLNIQVEDETRTQERLRRGEVVGAISIQPQALPSCLVDQLGALDYLFVASPDFAQRYFANGVTKSSLLKAPAVAFDHLDDMHQAFLQQNFGLSPGSVPCHIVNSSEAFVQLAKQGSTCCMIPHLQIADELKSGELIDLTPGLCQRRMLYWHRFAPESRTMRKVTDALLDYGRKVLKQDEE
>NZ_CP026059.1|WP_004244077.1|2680832_2682260_-|dihydrolipoyl-dehydrogenase
MSTEIKAQVVVLGAGPAGYSAAFRCADLGLDTVLVERHSTLGGVCLNVGCIPSKALLHVAKVIEEAKALSEHGVVFDAPKTDIDKIRIWKDKVISQLTGGLAGMAKGRKVNVVNGEARFTGSHTLSVEGSEGTTTITFENAIVAAGSRPIELPFIPHEDPRVWDSTDALQLKTVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLDAGKAGIEVDDRGFIHVDKQMRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWVGMTEKEAKEKGVSYEVATFPWAASGRAIASDCADGMTKLIFDKETNRVIGGAIVGSNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLYESIGMAAEVFEGSITDLPNPKAKKKK
>NZ_CP026059.1|WP_036895460.1|2682461_2684372_-|pyruvate-dehydrogenase-complex-dihydrolipoyllysine-residue-acetyltransferase
MSIEIKVPDIGADEVEVTEVMVKVGDRIEEEQSLITVEGDKASMEVPSPQAGIVKEIKIAVGDKVETGSLIMIFDTEEGAQAPAQEAAPAPSAAAPAASELKEVHVPDIGGDEVEVTEVMVNVGDTISEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVSTGSLIMVFEVAGSAPAPSASAPAPAASAPAASAIKDVNVPDIGGDEVEVTEVMVKVGDTIAEEQSLITVEGDKASMEVPAPFAGVVKEIKIAVGDKVKTGSLIMTFEVAGAAPAAQAPAAPAASTSAAQAPAAPAASTSAAPAPSAPAKAPASAPAAKEEFVENEAYVHATPVIRRLAREFGVNLAKVKGTGRKGRILREDVQSYVKELIKRAESAPANAGGGLPGMLPWPKVDFSKFGEIEEVELSRIQKISGANLSRNWVMIPHVNLFDEADITEVEEFRKQQNKEAEKKKLDVKITPLVFVMKAAAKALADMPRFNSSISEDGQKLILKKYINIGIAVDTPNGLVVPVFKDVNKKGILELSYELAEVSKKARAGKLTASDMQGGCFTISSLGGIGTTGFAPIVNAPEVAIMGLSRSSMKPVWNGKEFVPRLMLPMSLSFDHRVIDGADGARFITLINQYMSDLRRLVM
>NZ_CP026059.1|WP_004244080.1|2684384_2687051_-|pyruvate-dehydrogenase-(acetyl-transferring),-homodimeric-type
MSDMLKNDVDPIETRDWLQAIDSVIREEGVERAQFLIDQVLKQARNGGLDIALGGSVHSDYINTIPVEDEPAYPGNLELERRIRSAIRWNAVMMVLRASKKDLELGGHMASYQSSATLYEVCFNHFFRAHNDNDGGDLVYFQGHISPGIYARAFLEGRLTEEQLNNFRQEIGGKGLSSYPHPKLMPEFWQFPTVSMGLGPLSAIYQAKFLKYLDHRGLKDTTKQRVYAFLGDGEMDEPESKGAITIAVREKLDNLCFVVNCNLQRLDGPVTGNGKIVNELEGIFAGAGWNVIKVMWGDRWDALLRKDTSGKLIQLMNETLDGDYQTFKSRDGAYVREHFFNRYPETAALVKDMTDDEIWALNRGGHDPKKVFAAFQKAKETKDKPTVILAQTIKGYGMGETAEGKNIAHQVKKMNMDGVKHFRDRFNIPVSDEKVAELPYITFDKDSEEYKYLHARRQELEGYLPARRTRFDEKLEIPTLEDFSQLLEEQSKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDVKGQILQEGINELGAGASWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFLIGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAFAYEVAVIMQDGLERMYGDKQENVYYYITTLNENYHMPAMPAGAEEGIRKGIYKLESLEGAKGKVQLLGSGSILRHVREAAQILSTEYGIGSDVYSVTSFTELARDGQDCERWNMLHPSEEPRVPYIAQIMNDAPAVASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDTSYVIVAALGELAKRGEIDVKVVEEAIKKYNINPEKVNPRLA
>NZ_CP026059.1|WP_036896159.1|2687214_2687985_-|pyruvate-dehydrogenase-complex-transcriptional-repressor-PdhR
MAYTKIRQPKLSDVIEQQLEHLILEGTLRPGEKLLPERELAKQFDVSRPSLREAIQKLEAKGFLLRRQGGGTFVQDNLWQSFSDPLAQLLSGHPESQFDLLETRHALEGIAAYYAALRGTDDDLERIKATHARIIDAHDKGDIAAESDAVLQYQLIVTEAAHNVVLLHLLRCMVPMLEQNIRQNFEFLYTRKEMLTAVSEHRTQIYQAIINREPEAAREASHRHLAFIEDVLLDMSREHTRRERSLRRLQQHPDLF
>NZ_CP026059.1|WP_017627935.1|2688311_2688854_-|1,6-anhydro-N-acetylmuramyl-L-alanine-amidase-AmpD
MEIKQGWLTGVKHVPSPNYDNRPEGEIPSLLIIHNISLPPGQFGGPYIDQLFTNTLAVDDHPFFNEIAHLRVSAHCLIRRDGEIVQYVPFTARAWHAGVSFYKGREKCNDFSIGIELEGTDECDFTPLQYQQLSTLTQQLIEHYPGIKENITGHSDVAPGRKTDPGPHFNWSYYRALLAK
>NZ_CP026059.1|WP_012368228.1|2689064_2689508_+|prepilin-peptidase-dependent-pilin
MNTLNYHSTENGFTLMELMIVIAIISILSSVAIPAYHGYIQKAALTDVLQTLSPYRSAVELCHYEHQYNQCHADASFMPQQFRSRYLTDIHVANGVISAKGKAQLEGLTIVMTPAANSKETLPQWQINCTSTNTALQTLCHKVFKSH
>NZ_CP026059.1|WP_004250359.1|2689606_2690710_+|Flp-pilus-assembly-complex-ATPase-component-TadA
MNNTIHTATEFIEQLLRHSLAQRVSDLHLEPQQNSLRIRARIDNHLVLFSPPDNQLANEILTRLKILANINIAEKRLPQDGQFNWSYQKNNYSIRVATLPTLYGEKIVLRLMNNLQQPQLAQLGFQTIHLTLLKKYLTQPQGMILVTGPTGSGKTLTLYSCLQYLNKDNRNINSIEDPIELPLHGINQTQITEKAGITFATILRALLRQDPDVIMIGEIRDQQTAEIAIKAAQTGHLVLSTLHTNSTQATLARLANLGIAKDLIDSCVKLIISQRLVRCLCSNCKYPSPEQKNFIINNQQIILPNWQATGCQFCYSGYKGRTAIYDCFELAKQSLPSPYALFNSGIELIKKGITSLDEVYQVVGDIE
>NZ_CP026059.1|WP_012368229.1|2690706_2691906_+|type-II-secretion-system-F-family-protein
MKLHFIYRYNALTYQGKWLSGNVVAQSKHEVIDQLIQQQKLPVKIRLYRVIIFQNSDKQYRIQLLEQLALLLHSGLALLPALTLLKEECRYLHWQCVLNDIIFHLNQGGALSKQLSRYPLYFPANLTHFIYIGEESGKLDEVLLLQTTQLKNQRDLIKKIIKAFQYPLFLLLTLIVITISMLIYVLPEYQSLYSAFNTELPMLTLTLIRCSQWFSQYSLIILLFILIISYSYYTIKHHSAKFRDIEQRCWLNLPYLGVLLRYHQLHIIFQIMTITQQAGLPLLQGLKIITEQLTHSLYQRALTDMIAHITQGKSLSSFMRHNPLFPPICYQLISSAENSGQLQFFCQQLTHWFYHQLEERLDSVKTWLEPILMTLIALITGTLIIAMYLPVLQLGDTIH
>NZ_CP026059.1|WP_004244087.1|2692183_2692798_+|dephospho-CoA-kinase
MTYTVALTGGIGSGKTTIANGFASLGVPLVDADVIARLVVEPDSPGLKALQQHFGDTILLPDGKLNRAQLRHIIFQNQQEKAWVNQLLHPLIQQETQKQIQQIRAPYFIWVVPLLVENKLTHLADRILVVDVTEEEQITRTMQRDGVSRDHVLKILQAQAKREQRLAVADDIIENHDNSLNQDEQIKQLHQHYLELAQKSNTGQ
>NZ_CP026059.1|WP_004244089.1|2692800_2693553_+|cell-division-protein-ZapD
MSEETSTIIFEHPLNEKMRSWLRIENSLIQLNSFQSINSLSSALSFFRAVSEFIEVLDRGEIRAELLKELEKRQKKLQQWLSFPNVDKEIVSHIINELSESACALSKAPRIGQHLKQDKIISLVKQRLSIPGGCCSFDVPTLHLWLNLPQTVRTEKLTCWQEGLYPLQNALNALLTLIRQSDTFKPVLSHNGFYQDSTEEGELLRIKLLASQQIYPQVSGHKNRYAIRFLPLDSEHGTIPSELPFEISCC

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

925322 : 933526

Mycobacterium_phage(28.57%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004246075.1\|925322_926522_-	glycine betaine/L-proline ABC transporter ATP-binding protein ProV	G3M9Y6	Bacillus_virus	3.8e-28	37.6
WP_004247427.1\|927130_928099_-	class 1b ribonucleoside-diphosphate reductase subunit beta	R4TBI6	Mycobacterium_phage	3.5e-133	71.0
WP_036894413.1\|928124_930251_-	class 1b ribonucleoside-diphosphate reductase subunit alpha	V9VI16	Lactococcus_phage	3.4e-205	51.3
WP_004246072.1\|930279_930684_-	class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI	R4JF54	Bacillus_phage	3.7e-12	38.5
WP_004246071.1\|930695_930920_-	glutaredoxin-like protein NrdH	V5UN81	Mycobacterium_phage	1.4e-13	47.9
WP_004246069.1\|931201_931675_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	NA	NA	NA
WP_004246068.1\|931872_932082_+	transcription antiterminator/RNA stability regulator CspE	A0A1W6JNX5	Morganella_phage	5.9e-22	74.2
WP_004246065.1\|932266_932407_-	hypothetical protein	NA	NA	NA	NA
WP_004246058.1\|933151_933526_-	fluoride efflux transporter CrcB	A0A2H4J148	uncultured_Caudovirales_phage	2.7e-25	52.0

DBSCAN-SWA_2

1136842 : 1215374

Bacillus_phage(17.65%)

tRNA,plate,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004244558.1\|1136842_1137157_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	1.5e-13	44.1
WP_036894527.1\|1137187_1139482_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.3e-170	42.9
WP_004244560.1\|1139601_1139820_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_004247616.1\|1140139_1140832_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_004244562.1\|1140833_1142585_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	A0A2R8FG22	Brazilian_cedratvirus	1.4e-18	31.7
WP_036894531.1\|1142587_1144357_-	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	W8CYL7	Bacillus_phage	3.0e-21	23.5
WP_004252032.1\|1144498_1145458_-	thioredoxin-disulfide reductase	A0A2I2L5E1	Orpheovirus	3.4e-64	45.5
WP_004244566.1\|1146000_1146495_+	leucine-responsive transcriptional regulator Lrp	NA	NA	NA	NA
WP_036894533.1\|1146622_1150426_+	DNA translocase FtsK	A0A218M9A2	Mycobacterium_phage	1.7e-90	49.3
WP_004244569.1\|1150538_1151144_+	outer membrane lipoprotein chaperone LolA	NA	NA	NA	NA
WP_012367706.1\|1151154_1152504_+	replication-associated recombination protein A	G3MBE0	Bacillus_virus	1.8e-79	40.6
WP_004244571.1\|1152637_1153927_+\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	4.1e-97	46.2
WP_004244572.1\|1154106_1154439_-	hypothetical protein	NA	NA	NA	NA
WP_012367707.1\|1154838_1155888_+	ureidoglycolate dehydrogenase	NA	NA	NA	NA
WP_004244574.1\|1155960_1156866_-	hypothetical protein	NA	NA	NA	NA
WP_004244575.1\|1157223_1157964_-	pyruvate formate lyase 1-activating protein	A0A2P0VNQ0	Tetraselmis_virus	2.3e-20	27.0
WP_004244576.1\|1158071_1160354_-	formate C-acetyltransferase	A0A2P0VNR5	Tetraselmis_virus	1.0e-159	41.6
WP_004244577.1\|1160408_1161263_-	formate transporter FocA	NA	NA	NA	NA
WP_036894537.1\|1161932_1163690_-	30S ribosomal protein S12 methylthiotransferase accessory factor YcaO	NA	NA	NA	NA
WP_004244579.1\|1163917_1164955_+	L-asparaginase 2	NA	NA	NA	NA
WP_036894539.1\|1165029_1166298_-	filamentous hemagglutinin N-terminal domain-containing protein	NA	NA	NA	NA
WP_103429213.1\|1166434_1167865_-	MFS transporter	A0A0M3UL24	Mycobacterium_phage	6.3e-06	24.2
WP_004244582.1\|1168001_1169090_+	3-phosphoserine/phosphohydroxythreonine transaminase	M1Q1P2	Streptococcus_phage	5.7e-84	47.0
WP_004252010.1\|1169286_1170573_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA
WP_004244585.1\|1170861_1171539_+	(d)CMP kinase	NA	NA	NA	NA
WP_004244586.1\|1171720_1173394_+	30S ribosomal protein S1	NA	NA	NA	NA
WP_004244587.1\|1173458_1173746_+	integration host factor subunit beta	A7KV42	Bacillus_phage	8.4e-11	40.0
WP_036894541.1\|1174170_1176540_+	DNA internalization-related competence protein ComEC/Rec2	Q0H255	Geobacillus_phage	2.7e-22	29.7
WP_004244589.1\|1176576_1178322_+	lipid A ABC transporter ATP-binding protein/permease MsbA	W8CYL7	Bacillus_phage	8.4e-61	30.9
WP_004244590.1\|1178318_1179320_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA
WP_004247631.1\|1179815_1180031_+	cold shock domain-containing protein	NA	NA	NA	NA
WP_004244593.1\|1180445_1180625_+	hypothetical protein	NA	NA	NA	NA
WP_004244594.1\|1180629_1181391_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA
WP_017827043.1\|1181514_1182345_-	envelope biogenesis factor ElyC	NA	NA	NA	NA
WP_004244596.1\|1182724_1183498_+\|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	NA	NA	NA	NA
WP_004244597.1\|1183507_1184830_+	chromosome partition protein MukF	NA	NA	NA	NA
WP_004247634.1\|1184810_1185542_+	chromosome partition protein MukE	NA	NA	NA	NA
WP_012367715.1\|1185538_1189996_+	chromosome partition protein MukB	NA	NA	NA	NA
WP_004244601.1\|1190278_1190932_-	type A chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	1.0e-99	79.0
WP_004247637.1\|1191337_1192051_+	acid phosphatase AphA	NA	NA	NA	NA
WP_004244603.1\|1192393_1194109_+	L,D-transpeptidase	NA	NA	NA	NA
WP_004244605.1\|1194440_1194989_+	YcbK family protein	NA	NA	NA	NA
WP_004247640.1\|1195038_1195689_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_004244607.1\|1195781_1196255_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_004244608.1\|1196345_1198082_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004244609.1\|1198074_1199430_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_004244610.1\|1199467_1203016_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA
WP_004244611.1\|1203018_1204482_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004244612.1\|1204487_1205138_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_004244614.1\|1205139_1205928_-	hypothetical protein	NA	NA	NA	NA
WP_036894552.1\|1205931_1208655_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.4e-83	30.5
WP_004244617.1\|1208663_1209419_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_004247647.1\|1209411_1210770_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004244619.1\|1210771_1211323_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_004247648.1\|1211324_1212593_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_036894554.1\|1212597_1213635_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_017628432.1\|1213598_1215374_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA

DBSCAN-SWA_3

1380202 : 1468731

Salmonella_phage(23.81%)

tRNA,transposase,head,tail,lysis,capsid,terminase,portal,integrase

attL 1385120:1385135|attR 1449389:1449404

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004247117.1\|1380202_1381306_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004247118.1\|1381411_1381864_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004247841.1\|1381856_1382486_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004247120.1\|1382624_1383878_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-21	92.6
WP_036894692.1\|1384042_1385338_+	hypothetical protein	NA	NA	NA	NA
1385120:1385135	attL	NA	NA	NA	NA
WP_036894693.1\|1385334_1386462_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	O21925	Phage_21	6.7e-128	60.9
WP_036894694.1\|1386442_1386685_-	excisionase	NA	NA	NA	NA
WP_036894695.1\|1386746_1387277_-	hypothetical protein	A0A1W6JP41	Morganella_phage	2.8e-52	58.0
WP_036894696.1\|1387333_1388161_-	YfdQ family protein	A0A2R2Z323	Escherichia_phage	1.9e-79	56.6
WP_004247126.1\|1388226_1388601_-	hypothetical protein	Q8HAA1	Salmonella_phage	3.2e-42	71.4
WP_049206439.1\|1389059_1389527_+	hypothetical protein	NA	NA	NA	NA
WP_036894697.1\|1389546_1389750_-	hypothetical protein	NA	NA	NA	NA
WP_036894706.1\|1389892_1390780_+	BRCT domain-containing protein	NA	NA	NA	NA
WP_036894708.1\|1390762_1391446_-	helix-turn-helix transcriptional regulator	A0A0N7C1P9	Escherichia_phage	1.6e-44	43.4
WP_049206440.1\|1391570_1391834_+	helix-turn-helix domain-containing protein	A0A0M4QX15	Salmonella_phage	1.4e-07	42.9
WP_036894710.1\|1391885_1392344_+	hypothetical protein	K7PJS5	Enterobacterial_phage	7.9e-27	50.8
WP_036894714.1\|1392632_1392803_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_036894715.1\|1392815_1393907_+	hypothetical protein	K4NZ18	Pseudomonas_phage	1.1e-29	48.2
WP_004247134.1\|1394078_1394786_+	phage regulatory protein/antirepressor Ant	G0ZND1	Cronobacter_phage	5.6e-56	51.7
WP_036894718.1\|1394785_1395811_+	DUF968 domain-containing protein	A0A1W6JP62	Morganella_phage	2.6e-86	46.8
WP_036894721.1\|1395838_1396237_+	antitermination protein	Q8W638	Enterobacteria_phage	7.8e-31	53.5
WP_036894724.1\|1396451_1397171_+	hypothetical protein	NA	NA	NA	NA
WP_036894726.1\|1397180_1398293_+	XRE family transcriptional regulator	B6SBZ6	Clostridium_virus	5.8e-39	30.9
WP_036894729.1\|1398477_1399140_-	hypothetical protein	NA	NA	NA	NA
WP_004251632.1\|1399829_1400165_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_017827436.1\|1400268_1401195_+	cupin domain-containing protein	NA	NA	NA	NA
WP_036894733.1\|1401610_1402039_+	hypothetical protein	NA	NA	NA	NA
WP_036894738.1\|1402191_1402443_+	hypothetical protein	NA	NA	NA	NA
WP_036894740.1\|1402886_1403156_+	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	1.1e-17	51.2
WP_036894746.1\|1403155_1403626_+	lysozyme	A0A1W6JNW4	Morganella_phage	1.5e-49	61.8
WP_162837602.1\|1403607_1403766_+	hypothetical protein	NA	NA	NA	NA
WP_036894748.1\|1403768_1404230_+\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	4.4e-25	48.3
WP_036894750.1\|1405237_1405534_+	HNH endonuclease	A0A1V0SEA1	Indivirus	1.2e-07	40.3
WP_036894753.1\|1405670_1406270_+\|terminase	terminase small subunit	S4TNN3	Salmonella_phage	1.2e-19	34.0
WP_036894755.1\|1406273_1407935_+\|terminase	terminase large subunit	S4TSQ6	Salmonella_phage	1.3e-260	76.1
WP_004244737.1\|1407971_1409915_+\|capsid	phage major capsid protein	S4TNE3	Salmonella_phage	2.2e-211	60.0
WP_004244738.1\|1409970_1410192_+	hypothetical protein	NA	NA	NA	NA
WP_004251722.1\|1410239_1411556_+\|portal	phage portal protein	A0A0P0ZCX8	Stx2-converting_phage	1.6e-125	56.9
WP_049220616.1\|1411552_1412839_+	hypothetical protein	S4TNN1	Salmonella_phage	1.2e-40	54.5
WP_004244743.1\|1412835_1413162_+\|head,tail	phage gp6-like head-tail connector protein	S4TSQ3	Salmonella_phage	2.3e-12	35.2
WP_036894757.1\|1413169_1413514_+\|head	phage head closure protein	NA	NA	NA	NA
WP_036894760.1\|1413497_1413971_+	HK97 gp10 family phage protein	A0A0R6PHU8	Moraxella_phage	1.6e-11	32.1
WP_036894762.1\|1413976_1414318_+	DUF3168 domain-containing protein	NA	NA	NA	NA
WP_036894764.1\|1414327_1414993_+	hypothetical protein	NA	NA	NA	NA
WP_036894767.1\|1415056_1415473_+	hypothetical protein	NA	NA	NA	NA
WP_036894769.1\|1415469_1415748_+	DUF4035 domain-containing protein	NA	NA	NA	NA
WP_036894770.1\|1415788_1419040_+\|tail	phage tail tape measure protein	A0A220VZA0	Acinetobacter_phage	3.3e-02	43.1
WP_036894772.1\|1419040_1419637_+	hypothetical protein	S4TSP7	Salmonella_phage	3.0e-50	51.8
WP_036894775.1\|1419636_1420218_+	hypothetical protein	Q7Y3Z7	Yersinia_phage	3.1e-52	50.0
WP_004251562.1\|1420229_1420535_+	hypothetical protein	NA	NA	NA	NA
WP_004251558.1\|1420566_1420965_+	hypothetical protein	A0A059VK01	Pseudomonas_phage	9.2e-32	47.7
WP_052124749.1\|1420964_1424690_+	DUF1983 domain-containing protein	Q7Y3Z3	Yersinia_phage	2.3e-201	52.1
WP_004245936.1\|1424683_1425052_+	hypothetical protein	NA	NA	NA	NA
WP_012367646.1\|1425053_1425668_+	hypothetical protein	NA	NA	NA	NA
WP_004247524.1\|1425717_1425978_+	hypothetical protein	A0A1P8DTJ0	Proteus_phage	1.9e-17	57.4
WP_012367647.1\|1426686_1426992_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_017628485.1\|1427092_1428175_-	type 1 fimbrial protein	NA	NA	NA	NA
WP_036894778.1\|1428184_1430719_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_026090491.1\|1430728_1431454_-	fimbria/pilus periplasmic chaperone	NA	NA	NA	NA
WP_004247004.1\|1431519_1432062_-	uroepithelial cell adherence major pilin UcaA	NA	NA	NA	NA
WP_102086658.1\|1433960_1435193_+	DUF3440 domain-containing protein	L0P6Z6	Lactobacillus_phage	3.5e-61	34.0
WP_036894780.1\|1435205_1435847_+	ParB-like nuclease domain-containing protein	A0A0F7L444	uncultured_marine_virus	2.4e-50	46.8
WP_036894781.1\|1436133_1436652_-	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA
WP_127645612.1\|1437151_1437592_-	hypothetical protein	NA	NA	NA	NA
WP_036894784.1\|1437592_1437820_-	hypothetical protein	NA	NA	NA	NA
WP_004247902.1\|1438001_1438166_+	isocitrate dehydrogenase	Q77Z09	Phage_21	1.6e-22	92.6
WP_190306344.1\|1438972_1439842_+	DUF2971 domain-containing protein	NA	NA	NA	NA
WP_052124751.1\|1440782_1442057_+	RelA/SpoT domain-containing protein	NA	NA	NA	NA
WP_004251516.1\|1442342_1442747_-	hypothetical protein	NA	NA	NA	NA
WP_004242508.1\|1443523_1443682_-\|transposase	transposase	NA	NA	NA	NA
WP_004251511.1\|1444000_1445206_+	hypothetical protein	NA	NA	NA	NA
WP_004247906.1\|1446490_1447615_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_004247907.1\|1448054_1448267_+	RNA chaperone/antiterminator CspA	A0A1W6JNX5	Morganella_phage	2.0e-25	78.6
WP_004242516.1\|1448599_1449058_+	Hsp20 family protein	NA	NA	NA	NA
WP_004247908.1\|1449548_1450010_+	hypothetical protein	NA	NA	NA	NA
1449389:1449404	attR	NA	NA	NA	NA
WP_004247909.1\|1450133_1450508_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004242519.1\|1450597_1451446_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_004242521.1\|1451686_1451884_+	hypothetical protein	NA	NA	NA	NA
WP_004251489.1\|1451907_1452450_-	hypothetical protein	NA	NA	NA	NA
WP_026090443.1\|1453290_1453605_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004247912.1\|1454249_1454891_-	ParB-like nuclease domain-containing protein	A0A0F7L444	uncultured_marine_virus	2.4e-50	47.8
WP_004251487.1\|1454903_1456130_-	DUF3440 domain-containing protein	A0A220GKF8	Streptococcus_phage	2.0e-61	33.2
WP_004247914.1\|1456687_1457350_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_004242530.1\|1457912_1458269_+	MmcQ/YjbR family DNA-binding protein	NA	NA	NA	NA
WP_004242531.1\|1458471_1458642_+	hypothetical protein	NA	NA	NA	NA
WP_036894800.1\|1458926_1459922_+	DUF1722 domain-containing protein	NA	NA	NA	NA
WP_004247917.1\|1460138_1460315_+	hypothetical protein	A0A1W6JNZ9	Morganella_phage	9.1e-08	60.0
WP_004242534.1\|1460806_1461028_+	DUF465 domain-containing protein	NA	NA	NA	NA
WP_004242536.1\|1461453_1461735_+	DUF5339 domain-containing protein	NA	NA	NA	NA
WP_004242537.1\|1462103_1462517_+	hypothetical protein	NA	NA	NA	NA
WP_004247919.1\|1462544_1462787_+	hypothetical protein	NA	NA	NA	NA
WP_004242541.1\|1462849_1463410_-	AAA family ATPase	A0A219VHB7	Ochrobactrum_phage	1.9e-19	50.6
WP_004242542.1\|1463785_1463983_+	ParD-like family protein	NA	NA	NA	NA
WP_004242544.1\|1464000_1464777_+	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_004242548.1\|1465011_1465395_+	antitermination protein	A0A1W6JNX1	Morganella_phage	2.3e-24	47.8
WP_004242549.1\|1465537_1466401_+	triacylglycerol lipase	NA	NA	NA	NA
WP_004247923.1\|1466526_1466958_-	hypothetical protein	Q7Y3V7	Yersinia_phage	1.8e-20	38.1
WP_036894804.1\|1467083_1467500_-\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	7.6e-45	62.8
WP_036894806.1\|1467522_1468731_+\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	2.0e-186	80.8

DBSCAN-SWA_4

1828826 : 1911498

104

Morganella_phage(43.48%)

tRNA,transposase,tail,lysis,capsid,bacteriocin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004243086.1\|1828826_1829747_+\|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	A0A0U2S5Z2	Escherichia_phage	1.2e-130	89.5
WP_103429221.1\|1830061_1831045_-	zinc transporter ZntB	NA	NA	NA	NA
WP_017628085.1\|1831409_1831742_+	DUF4377 domain-containing protein	NA	NA	NA	NA
WP_036894981.1\|1832034_1832595_+	porin family protein	NA	NA	NA	NA
WP_004251029.1\|1832950_1834570_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004243092.1\|1834795_1835299_+	thiol peroxidase	NA	NA	NA	NA
WP_036894984.1\|1835398_1836964_-	transcriptional regulator TyrR	NA	NA	NA	NA
WP_004243094.1\|1837100_1837523_-	hypothetical protein	NA	NA	NA	NA
WP_036894985.1\|1837984_1839031_-	TIGR01620 family protein	NA	NA	NA	NA
WP_103429222.1\|1839027_1840422_-	YcjX family protein	NA	NA	NA	NA
WP_004243098.1\|1840402_1840660_-	phage shock protein PspD	NA	NA	NA	NA
WP_004243099.1\|1840744_1841101_-	envelope stress response membrane protein PspC	NA	NA	NA	NA
WP_004243100.1\|1841100_1841331_-	envelope stress response membrane protein PspB	NA	NA	NA	NA
WP_017628083.1\|1841367_1842036_-	phage shock protein PspA	NA	NA	NA	NA
WP_004248148.1\|1842252_1843257_+	phage shock protein operon transcriptional activator	NA	NA	NA	NA
WP_036894987.1\|1843537_1845229_+	peptide ABC transporter substrate-binding protein SapA	NA	NA	NA	NA
WP_004251015.1\|1845225_1846191_+	peptide ABC transporter permease SapB	NA	NA	NA	NA
WP_004243108.1\|1846177_1847071_+	peptide ABC transporter permease SapC	NA	NA	NA	NA
WP_004248150.1\|1847070_1848072_+	peptide ABC transporter ATP-binding protein SapD	G9BWD6	Planktothrix_phage	5.8e-06	24.1
WP_004243110.1\|1848061_1848871_+	peptide ABC transporter ATP-binding protein SapF	G9BWD6	Planktothrix_phage	1.0e-13	26.9
WP_012367980.1\|1849079_1849868_+	enoyl-ACP reductase FabI	NA	NA	NA	NA
WP_036894989.1\|1850086_1850698_+	glutathione transferase GstA	NA	NA	NA	NA
WP_004248153.1\|1850775_1851645_-	pyridoxal kinase PdxY	NA	NA	NA	NA
WP_004248155.1\|1851765_1853040_-\|tRNA	tyrosine--tRNA ligase	A0A1L2CUL7	Pectobacterium_phage	3.6e-85	42.8
WP_004243118.1\|1853170_1853824_-	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA
WP_004243120.1\|1853867_1854980_-	anhydro-N-acetylmuramic acid kinase	NA	NA	NA	NA
WP_004243121.1\|1855200_1855668_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA
WP_004243123.1\|1856012_1856441_-	transcriptional regulator SlyA	NA	NA	NA	NA
WP_004243130.1\|1856910_1857150_-	DUF1289 domain-containing protein	NA	NA	NA	NA
WP_012367981.1\|1857330_1857738_+	lactoylglutathione lyase	NA	NA	NA	NA
WP_004243132.1\|1857833_1858472_+	ribonuclease T	NA	NA	NA	NA
WP_036896105.1\|1858542_1859751_-\|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1B0VCD8	Salmonella_phage	8.6e-190	81.5
WP_036894992.1\|1859773_1860190_+\|transposase	IS200/IS605 family transposase	A0A1S5RHE3	Helicobacter_phage	2.2e-44	62.5
WP_004243134.1\|1860341_1860680_-	Grx4 family monothiol glutaredoxin	NA	NA	NA	NA
WP_036894993.1\|1860957_1861188_+	DNA polymerase III subunit theta	A0A1P8DTI0	Proteus_phage	4.5e-31	90.8
WP_049206383.1\|1861456_1861801_+	hypothetical protein	NA	NA	NA	NA
WP_036894997.1\|1862253_1862511_-	cloacin	NA	NA	NA	NA
WP_036894998.1\|1862732_1862990_-\|bacteriocin	bacteriocin immunity protein	NA	NA	NA	NA
WP_049206695.1\|1862992_1864855_-	hypothetical protein	NA	NA	NA	NA
WP_036895000.1\|1865287_1865902_-	hypothetical protein	NA	NA	NA	NA
WP_004245936.1\|1865903_1866272_-	hypothetical protein	NA	NA	NA	NA
WP_036895003.1\|1866265_1870414_-	DUF1983 domain-containing protein	A0A1W6JNW2	Morganella_phage	0.0e+00	70.1
WP_036895006.1\|1870413_1870980_-\|tail	tail assembly protein	A0A1W6JP03	Morganella_phage	1.4e-49	77.4
WP_036895008.1\|1870916_1871636_-	C40 family peptidase	A0A1W6JNU8	Morganella_phage	1.1e-110	74.5
WP_036895011.1\|1871639_1872338_-\|tail	phage minor tail protein L	A0A1W6JNT8	Morganella_phage	6.2e-116	84.1
WP_017628783.1\|1872334_1872664_-\|tail	phage tail protein	A0A1W6JNT2	Morganella_phage	9.6e-43	71.6
WP_049206411.1\|1872805_1873336_+	hypothetical protein	NA	NA	NA	NA
WP_036895012.1\|1873383_1873662_-	hypothetical protein	NA	NA	NA	NA
WP_036895014.1\|1873677_1877010_-	tape measure protein	A0A1W6JNU2	Morganella_phage	1.4e-197	44.9
WP_036895017.1\|1877074_1878217_-	hypothetical protein	NA	NA	NA	NA
WP_036895020.1\|1878384_1878573_+	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_036895022.1\|1878637_1879045_+	type II toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA
WP_036895024.1\|1879208_1879988_-	ORF6N domain-containing protein	H6WRU9	Salmonella_phage	1.1e-47	46.4
WP_080741352.1\|1880063_1880633_-	hypothetical protein	H6WRU8	Salmonella_phage	2.0e-32	61.1
WP_080741348.1\|1880706_1880880_-	Arc family DNA-binding protein	NA	NA	NA	NA
WP_036895027.1\|1881004_1881403_+	Arc family DNA-binding protein	NA	NA	NA	NA
WP_036895028.1\|1881547_1882069_+	hypothetical protein	NA	NA	NA	NA
WP_036895031.1\|1882070_1883441_+	adenylate/guanylate cyclase domain-containing protein	NA	NA	NA	NA
WP_036895034.1\|1883633_1884320_-	hypothetical protein	A0A1W6JNX2	Morganella_phage	2.2e-89	70.2
WP_036895035.1\|1884369_1885125_-	Ig-like domain-containing protein	A0A1W6JNT1	Morganella_phage	4.5e-104	78.5
WP_036895037.1\|1885175_1885421_-	hypothetical protein	NA	NA	NA	NA
WP_036895039.1\|1885492_1885864_-	hypothetical protein	A0A1W6JNU7	Morganella_phage	5.0e-48	71.5
WP_036895041.1\|1885860_1886229_-	HK97 gp10 family phage protein	A0A1W6JNX7	Morganella_phage	9.1e-50	81.1
WP_049206412.1\|1886231_1886573_-	hypothetical protein	A0A1W6JNW7	Morganella_phage	3.1e-52	80.5
WP_049206413.1\|1886574_1886952_-	hypothetical protein	A0A1W6JP09	Morganella_phage	3.4e-44	72.0
WP_036895043.1\|1886994_1887945_-	hypothetical protein	A0A1W6JNV5	Morganella_phage	7.8e-154	87.8
WP_036895046.1\|1887950_1888637_-	hypothetical protein	A0A1W6JNU9	Morganella_phage	8.9e-75	80.6
WP_036895047.1\|1888711_1889776_-\|capsid	minor capsid protein	A0A1W6JNT7	Morganella_phage	5.4e-103	51.4
WP_036895048.1\|1889784_1891161_-	DUF4055 domain-containing protein	A0A1W6JNV0	Morganella_phage	2.0e-211	78.4
WP_036895049.1\|1891162_1892647_-	hypothetical protein	A0A1W6JNY3	Morganella_phage	3.6e-270	88.7
WP_036895051.1\|1892649_1893252_-	hypothetical protein	A0A077KBY7	Edwardsiella_phage	4.3e-65	69.6
WP_017628805.1\|1893316_1893868_+	YfbU family protein	NA	NA	NA	NA
WP_017628806.1\|1894185_1894425_-	hypothetical protein	NA	NA	NA	NA
WP_017628807.1\|1894547_1894973_-	hypothetical protein	NA	NA	NA	NA
WP_036895055.1\|1895261_1895723_-\|lysis	lysis protein	A0A1P8DTG0	Proteus_phage	4.4e-25	48.3
WP_012367623.1\|1895725_1895884_-	hypothetical protein	NA	NA	NA	NA
WP_017628809.1\|1895865_1896336_-	lysozyme	A0A1W6JNW4	Morganella_phage	4.4e-49	62.5
WP_036895056.1\|1896335_1896605_-	bacteriophage protein	A0A2H4FNF0	Salmonella_phage	2.1e-19	53.5
WP_036895058.1\|1896658_1897081_-	hypothetical protein	NA	NA	NA	NA
WP_036895059.1\|1897555_1898509_+	hypothetical protein	NA	NA	NA	NA
WP_036895061.1\|1898684_1899143_-	Hsp20 family protein	NA	NA	NA	NA
WP_036895063.1\|1899382_1900015_-	antitermination protein	I6PDF8	Cronobacter_phage	1.2e-22	34.3
WP_036895065.1\|1900014_1900371_-	RusA family crossover junction endodeoxyribonuclease	G8C7V6	Escherichia_phage	4.2e-44	71.6
WP_004245984.1\|1900367_1900658_-	DUF1364 domain-containing protein	A0A2H4JIC4	uncultured_Caudovirales_phage	7.2e-34	68.1
WP_036895067.1\|1900736_1901186_-	hypothetical protein	A0A2H4FNF5	Salmonella_phage	1.7e-13	32.2
WP_026090523.1\|1901253_1901583_-	hypothetical protein	A0A1C9LVV9	Vibrio_phage	1.1e-22	39.0
WP_036895068.1\|1901610_1902996_-	AAA family ATPase	Q716D2	Shigella_phage	6.8e-114	47.7
WP_036895070.1\|1902995_1903763_-	helix-turn-helix domain-containing protein	A5LH71	Enterobacteria_phage	1.5e-22	51.9
WP_167652502.1\|1903759_1903933_-	hypothetical protein	NA	NA	NA	NA
WP_036895073.1\|1904028_1904391_-	hypothetical protein	A0A1W6JNY4	Morganella_phage	2.6e-17	51.6
WP_036895075.1\|1904522_1904708_-	hypothetical protein	A4KWW0	Enterobacteria_phage	2.3e-09	58.3
WP_036895077.1\|1904803_1905514_+	LexA family transcriptional regulator	A4KWV9	Enterobacteria_phage	2.8e-79	60.9
WP_036895079.1\|1905589_1906618_+	hypothetical protein	A0A0P0ZDC5	Stx2-converting_phage	2.2e-130	65.9
WP_036895081.1\|1906604_1907153_+	hypothetical protein	A0A0P0ZCX2	Stx2-converting_phage	5.2e-17	35.8
WP_036895083.1\|1907671_1907950_+	hypothetical protein	A0A1P8DTK1	Proteus_phage	1.5e-33	84.6
WP_161799388.1\|1907946_1908117_-	hypothetical protein	NA	NA	NA	NA
WP_036895085.1\|1908523_1909066_+	hypothetical protein	A0A1B1W2E3	Salmonella_phage	1.8e-33	38.5
WP_004247466.1\|1909176_1909404_+	hypothetical protein	NA	NA	NA	NA
WP_164484711.1\|1909492_1909648_+	hypothetical protein	NA	NA	NA	NA
WP_017628822.1\|1909655_1909910_+	hypothetical protein	NA	NA	NA	NA
WP_017628823.1\|1909906_1910059_+	hypothetical protein	NA	NA	NA	NA
WP_017628824.1\|1910055_1910376_+	hypothetical protein	NA	NA	NA	NA
WP_017827451.1\|1910377_1910989_+	ERF family protein	A0A1W6JP21	Morganella_phage	1.1e-73	69.2
WP_017827452.1\|1910988_1911498_+	single-stranded DNA-binding protein	C6ZR36	Salmonella_phage	4.9e-54	57.3

DBSCAN-SWA_5

2272534 : 2291404

Burkholderia_phage(26.67%)

plate,holin,lysis

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012368081.1\|2272534_2274973_+	molybdopterin-dependent oxidoreductase	A0A077SK27	Escherichia_phage	5.0e-261	54.5
WP_004243609.1\|2274984_2275602_+	dimethylsulfoxide reductase subunit B	A0A077SL61	Escherichia_phage	1.3e-88	67.8
WP_004243611.1\|2275605_2276382_+	dimethyl sulfoxide reductase anchor subunit	A0A077SK59	Escherichia_phage	5.1e-42	39.8
WP_004243612.1\|2276497_2277040_-	DUF924 domain-containing protein	A0A1V0SIY0	Klosneuvirus	1.9e-19	34.7
WP_017628013.1\|2277608_2277788_+	GhoT/OrtT family toxin	NA	NA	NA	NA
WP_103429226.1\|2277927_2279163_-	hypothetical protein	Q6IWQ6	Burkholderia_phage	3.2e-14	46.9
WP_017628011.1\|2279168_2279825_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	6.6e-35	39.4
WP_004243616.1\|2279821_2281009_-\|plate	baseplate J/gp47 family protein	A0A2H5BG53	Pseudoalteromonas_phage	1.9e-72	37.7
WP_004243617.1\|2281001_2281346_-	hypothetical protein	NA	NA	NA	NA
WP_012368086.1\|2281342_2282035_-	hypothetical protein	A1Z003	Burkholderia_virus	1.6e-34	37.1
WP_004243622.1\|2282037_2282850_-	hypothetical protein	Q6IWQ0	Burkholderia_phage	9.0e-42	39.2
WP_004243623.1\|2282818_2283139_-	hypothetical protein	NA	NA	NA	NA
WP_036895252.1\|2283151_2283640_-	hypothetical protein	NA	NA	NA	NA
WP_036895254.1\|2283642_2285946_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	6.8e-18	24.9
WP_004243627.1\|2286028_2286487_-	hypothetical protein	Q6IWV4	Burkholderia_phage	1.9e-25	48.5
WP_004243628.1\|2286546_2286999_-	hypothetical protein	NA	NA	NA	NA
WP_004248362.1\|2287009_2288497_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	1.9e-77	35.7
WP_004248364.1\|2288505_2289018_-	hypothetical protein	NA	NA	NA	NA
WP_036895256.1\|2289054_2289504_-\|lysis	lysis protein	NA	NA	NA	NA
WP_036895257.1\|2289500_2289905_-	structural protein	A0A0E3JJ20	Enterobacteria_phage	4.2e-24	45.0
WP_004248367.1\|2289907_2290207_-\|holin	phage holin, lambda family	A0A1P8DTE4	Proteus_phage	1.9e-21	51.0
WP_004243640.1\|2290588_2291404_-	antitermination protein	M9NZB0	Enterobacteria_phage	2.1e-54	43.4

DBSCAN-SWA_6

2480680 : 2522172

Burkholderia_phage(22.5%)

tRNA,plate,head,lysis,terminase,integrase

attL 2481472:2481491|attR 2522337:2522356

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004248453.1\|2480680_2481211_-\|tRNA	tRNA adenosine(34) deaminase TadA	S4VYT2	Pandoravirus	1.4e-06	31.5
2481472:2481491	attL	NA	NA	NA	NA
WP_036895334.1\|2481761_2482007_+	DinI-like family protein	NA	NA	NA	NA
WP_036895336.1\|2482031_2482286_+	hypothetical protein	NA	NA	NA	NA
WP_036895338.1\|2482364_2483417_+	glycosyltransferase	NA	NA	NA	NA
WP_036895339.1\|2483447_2484821_-	hypothetical protein	Q6IWQ6	Burkholderia_phage	1.2e-14	34.6
WP_036895341.1\|2484826_2485483_-	DUF2612 domain-containing protein	Q6IWQ4	Burkholderia_phage	5.8e-39	40.3
WP_020945492.1\|2485479_2486667_-\|plate	baseplate J/gp47 family protein	Q6IWQ3	Burkholderia_phage	2.6e-69	40.3
WP_036895342.1\|2486659_2487004_-	phage related-protein	NA	NA	NA	NA
WP_036895343.1\|2487000_2487693_-	hypothetical protein	A0A2H4P6V3	Pseudomonas_phage	1.2e-29	40.7
WP_036895344.1\|2487695_2488511_-	hypothetical protein	I7B2Q1	Escherichia_phage	2.9e-16	27.1
WP_004250595.1\|2488476_2488794_-	hypothetical protein	Q6IWP9	Burkholderia_phage	7.4e-08	32.3
WP_004250592.1\|2488793_2489321_-	hypothetical protein	NA	NA	NA	NA
WP_036895346.1\|2489317_2491669_-	hypothetical protein	A0A2H5BG44	Pseudoalteromonas_phage	7.7e-17	28.5
WP_004250588.1\|2491752_2492211_-	hypothetical protein	Q6IWV4	Burkholderia_phage	6.7e-26	48.5
WP_004250586.1\|2492251_2492704_-	hypothetical protein	I7ATP4	Escherichia_phage	5.8e-22	38.1
WP_036895348.1\|2492714_2494202_-	DUF3383 domain-containing protein	A0A088C3U1	Shewanella_sp._phage	2.5e-82	37.7
WP_004250583.1\|2494210_2494726_-	hypothetical protein	NA	NA	NA	NA
WP_004250582.1\|2494712_2495084_-	hypothetical protein	NA	NA	NA	NA
WP_004250581.1\|2495083_2495542_-	hypothetical protein	Q6IWU9	Burkholderia_phage	3.2e-12	37.6
WP_004250580.1\|2495541_2495973_-	DUF4054 domain-containing protein	Q6IWU8	Burkholderia_phage	7.4e-11	31.0
WP_036895353.1\|2495975_2496317_-	hypothetical protein	Q6IWU7	Burkholderia_phage	1.2e-08	37.3
WP_004250578.1\|2496386_2497454_-	DUF2184 domain-containing protein	A0A088C493	Shewanella_sp._phage	1.1e-52	39.3
WP_036895354.1\|2497453_2497951_-	hypothetical protein	NA	NA	NA	NA
WP_036895357.1\|2497950_2499213_-	DUF2213 domain-containing protein	Q6IWU4	Burkholderia_phage	7.2e-46	53.7
WP_036896149.1\|2499209_2499923_-\|head	head protein	A0A2H5BG15	Pseudoalteromonas_phage	1.1e-32	34.7
WP_036895360.1\|2499960_2501463_-	DUF1073 domain-containing protein	A0A2H4P6S9	Pseudomonas_phage	5.1e-99	41.8
WP_036895362.1\|2501467_2502865_-\|terminase	phage terminase large subunit	A0A2K9V3I6	Faecalibacterium_phage	7.4e-84	40.3
WP_036895365.1\|2503063_2504083_-\|terminase	terminase small subunit	A0A0U2RXW9	Escherichia_phage	1.9e-36	34.9
WP_004250565.1\|2504572_2505034_-\|lysis	lysis protein	A0A2H4JHL8	uncultured_Caudovirales_phage	8.5e-13	34.0
WP_004250562.1\|2505036_2505195_-	hypothetical protein	NA	NA	NA	NA
WP_036895367.1\|2505176_2505647_-	lysozyme	A0A1W6JNW4	Morganella_phage	4.1e-47	56.2
WP_036895369.1\|2505646_2505916_-	hypothetical protein	A0A2H4FNF0	Salmonella_phage	7.4e-17	47.8
WP_190306340.1\|2506184_2507231_-	site-specific DNA-methyltransferase	A0A1W6JP25	Morganella_phage	2.4e-143	71.1
WP_036895371.1\|2507373_2507571_-	hypothetical protein	Q9MC00	Enterobacteria_phage	2.4e-09	63.5
WP_036895374.1\|2507736_2508267_-	DUF1133 family protein	I6S672	Salmonella_phage	2.8e-36	52.0
WP_006533535.1\|2508254_2508566_-	DUF968 domain-containing protein	A0A1I9KFA7	Aeromonas_phage	1.3e-33	67.7
WP_036895384.1\|2508577_2509171_-	DUF1367 family protein	K7PKS6	Enterobacteria_phage	6.6e-58	55.3
WP_036895386.1\|2509263_2509851_-	hypothetical protein	NA	NA	NA	NA
WP_036895389.1\|2509882_2510224_-	hypothetical protein	H9C172	Pectobacterium_phage	1.9e-30	57.1
WP_052124759.1\|2510234_2511038_-	DNA adenine methylase	A0A0K1LM14	Caulobacter_phage	1.0e-61	45.7
WP_036895390.1\|2511034_2511268_-	hypothetical protein	NA	NA	NA	NA
WP_004250541.1\|2511270_2511447_-	hypothetical protein	NA	NA	NA	NA
WP_101495146.1\|2511466_2512843_-	replicative DNA helicase	A0A192Y673	Salmonella_phage	1.9e-100	45.4
WP_036895392.1\|2512832_2513426_-	ATP-binding protein	K7PLU3	Enterobacteria_phage	1.1e-44	47.6
WP_036895394.1\|2513418_2514270_-	helix-turn-helix domain-containing protein	Q8W642	Enterobacteria_phage	8.0e-33	60.4
WP_004250533.1\|2514271_2514496_-	hypothetical protein	H9C163	Pectobacterium_phage	9.5e-18	55.4
WP_036895397.1\|2514513_2514969_-\|tRNA	tRNA-(guanine-N1)-methyltransferase	H9C162	Pectobacterium_phage	5.8e-30	55.4
WP_036895399.1\|2515009_2515267_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_004250527.1\|2515371_2516130_+	helix-turn-helix transcriptional regulator	A0A0M3LPF9	Mannheimia_phage	1.5e-27	39.0
WP_036895402.1\|2516586_2516919_+	hypothetical protein	H9C158	Pectobacterium_phage	4.7e-05	38.1
WP_036895405.1\|2516918_2517179_+	hypothetical protein	A0A1B1W282	Salmonella_phage	1.3e-07	44.0
WP_036895408.1\|2517191_2519147_+	hypothetical protein	H9C157	Pectobacterium_phage	5.8e-119	39.6
WP_036895410.1\|2519158_2519659_+	siphovirus Gp157 family protein	H9C156	Pectobacterium_phage	1.6e-41	56.4
WP_036895412.1\|2519706_2519886_+	hypothetical protein	NA	NA	NA	NA
WP_167767281.1\|2519914_2520085_+	hypothetical protein	NA	NA	NA	NA
WP_036895414.1\|2520499_2520775_+	hypothetical protein	NA	NA	NA	NA
WP_004250508.1\|2520771_2522172_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
2522337:2522356	attR	NA	NA	NA	NA

DBSCAN-SWA_7

3091021 : 3099901

Caulobacter_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004245601.1\|3091021_3092590_-	methyl-accepting chemotaxis protein	A0A2H4J162	uncultured_Caudovirales_phage	7.2e-11	33.7
WP_036895581.1\|3092990_3093671_+	HAD-IB family hydrolase	NA	NA	NA	NA
WP_036895582.1\|3093767_3094343_-	TerD family protein	K4JRX3	Caulobacter_phage	3.4e-27	39.8
WP_004249446.1\|3094419_3094998_-	tellurium resistance membrane protein TerD	K4JRX3	Caulobacter_phage	2.4e-33	41.5
WP_004249445.1\|3095065_3096091_-	TerC/Alx family metal homeostasis membrane protein	K7QKE8	Escherichia_phage	1.3e-74	47.9
WP_004245607.1\|3096125_3096581_-	tellurite resistance TerB family protein	NA	NA	NA	NA
WP_036895584.1\|3096605_3097778_-	TerD family protein	NA	NA	NA	NA
WP_004245609.1\|3097778_3098363_-	tellurium resistance TerZ family protein	K4JRX3	Caulobacter_phage	4.2e-17	30.2
WP_036895585.1\|3098755_3099901_+	phosphoribosyltransferase	A0A172Q0Y1	Acinetobacter_phage	2.7e-31	27.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP026061

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP026059

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection