CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Prophage number
NZ_CP009863	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH29 chromosome, complete genome	3 crisprs	cas3,DEDDh,WYL,DinG,csa3,RT	9
NZ_CP009864	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH29 plasmid pKPC-e4e, complete sequence	0 crisprs	NA	2
NZ_CP009865	Klebsiella pneumoniae subsp. pneumoniae strain KPNIH29 plasmid pKPN-80a, complete sequence	0 crisprs	csa3	2

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009863_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009863_1

843180-843265

Orphan

Consensus_repeat	Method
AATAAAAACCATAAAAACCACAGT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009863_1

>merge|NZ_CP009863|1|843180-843265|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGTCATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCGAATAAAAACCATAAAAACCATAGT

>NZ_CP009863|1|1|843180-843265|CRISPRCasFinder
AATAAAAACCATAAAAACCACAGT	CATAAATCAGAGATATATCACTCCCGGGCAGTTCAGCG
AATAAAAACCATAAAAACCATAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009863.1\|WP_002888332.1\|839864_840692_+\|co-chaperone-DjlA	unknown	unknown	gnl\|CDD\|236512
NZ_CP009863.1\|WP_004177424.1\|852652_854155_-\|L-arabinose-isomerase	unknown	unknown	gnl\|CDD\|179503
NZ_CP009863.1\|WP_002888327.1\|834936_835926_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	unknown	unknown	gnl\|CDD\|234696
NZ_CP009863.1\|WP_002888320.1\|832154_832634_+\|type-3-dihydrofolate-reductase	unknown	unknown	gnl\|CDD\|182714
NZ_CP009863.1\|WP_023279864.1\|854165_855875_-\|ribulokinase	unknown	unknown	gnl\|CDD\|235221
NZ_CP009863.1\|WP_023279867.1\|840724_841423_-\|response-regulator	unknown	unknown	gnl\|CDD\|226931
NZ_CP009863.1\|WP_002888323.1\|833738_834116_-\|Co2+/Mg2+-efflux-protein-ApaG	unknown	unknown	gnl\|CDD\|180098
NZ_CP009863.1\|WP_032411667.1\|846192_849099_-\|RNA-polymerase-associated-protein-RapA	unknown	unknown	gnl\|CDD\|235319
NZ_CP009863.1\|WP_002888324.1\|834118_834940_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	unknown	unknown	gnl\|CDD\|234708
NZ_CP009863.1\|WP_004145980.1\|845520_846180_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	unknown	unknown	gnl\|CDD\|236659
NZ_CP009863.1\|WP_004147026.1\|837272_839621_-\|LPS-assembly-protein-LptD	unknown	unknown	gnl\|CDD\|235158
NZ_CP009863.1\|WP_023279868.1\|832885_833734_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH	unknown	unknown	gnl\|CDD\|273208
NZ_CP009863.1\|WP_004192048.1\|841412_843038_-\|sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|225827
NZ_CP009863.1\|WP_004222649.1\|849286_851644_-\|DNA-polymerase-II	unknown	unknown	gnl\|CDD\|235595
NZ_CP009863.1\|WP_002888347.1\|844906_845446_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	unknown	unknown	gnl\|CDD\|163145
NZ_CP009863.1\|WP_002888373.1\|857186_857954_+\|DedA-family-protein	unknown	unknown	gnl\|CDD\|223659
NZ_CP009863.1\|WP_004145972.1\|856212_857058_+\|arabinose-operon-transcriptional-regulator-AraC	unknown	unknown	gnl\|CDD\|236717
NZ_CP009863.1\|WP_002888329.1\|835931_837218_-\|peptidylprolyl-isomerase-SurA	unknown	unknown	gnl\|CDD\|236758
NZ_CP009863.1\|WP_002888353.1\|851819_852515_-\|L-ribulose-5-phosphate-4-epimerase	unknown	unknown	gnl\|CDD\|236181
NZ_CP009863.1\|WP_002888345.1\|843362_844727_+\|2-hydroxycarboxylate-transporter-family-protein	unknown	unknown	gnl\|CDD\|377030

Protein	Function_ID	Function_description	E-value
NZ_CP009863.1\|WP_002888332.1\|839864_840692_+\|co-chaperone-DjlA	gnl\|CDD\|236512	PRK09430, djlA, co-chaperone DjlA.	2.63694e-164
NZ_CP009863.1\|WP_004177424.1\|852652_854155_-\|L-arabinose-isomerase	gnl\|CDD\|179503	PRK02929, PRK02929, L-arabinose isomerase; Provisional.	0
NZ_CP009863.1\|WP_002888327.1\|834936_835926_-\|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA	gnl\|CDD\|234696	PRK00232, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Reviewed.	0
NZ_CP009863.1\|WP_002888320.1\|832154_832634_+\|type-3-dihydrofolate-reductase	gnl\|CDD\|182714	PRK10769, folA, type 3 dihydrofolate reductase.	1.71656e-127
NZ_CP009863.1\|WP_023279864.1\|854165_855875_-\|ribulokinase	gnl\|CDD\|235221	PRK04123, PRK04123, ribulokinase; Provisional.	0
NZ_CP009863.1\|WP_023279867.1\|840724_841423_-\|response-regulator	gnl\|CDD\|226931	COG4565, CitB, Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms].	8.0242e-66
NZ_CP009863.1\|WP_002888323.1\|833738_834116_-\|Co2+/Mg2+-efflux-protein-ApaG	gnl\|CDD\|180098	PRK05461, apaG, CO2+/MG2+ efflux protein ApaG; Reviewed.	7.84855e-74
NZ_CP009863.1\|WP_032411667.1\|846192_849099_-\|RNA-polymerase-associated-protein-RapA	gnl\|CDD\|235319	PRK04914, PRK04914, RNA polymerase-associated protein RapA.	0
NZ_CP009863.1\|WP_002888324.1\|834118_834940_-\|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA	gnl\|CDD\|234708	PRK00274, ksgA, 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA.	3.65731e-147
NZ_CP009863.1\|WP_004145980.1\|845520_846180_-\|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA	gnl\|CDD\|236659	PRK10158, PRK10158, bifunctional tRNA pseudouridine(32) synthase/23S rRNA pseudouridine(746) synthase RluA.	7.90078e-161
NZ_CP009863.1\|WP_004147026.1\|837272_839621_-\|LPS-assembly-protein-LptD	gnl\|CDD\|235158	PRK03761, PRK03761, LPS assembly outer membrane complex protein LptD; Provisional.	0
NZ_CP009863.1\|WP_023279868.1\|832885_833734_-\|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH	gnl\|CDD\|273208	TIGR00668, Bis5'-nucleosyl-tetraphosphatase_symmetrical, bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Diadenosine 5',5"'-P1,P4-tetraphosphate (Ap4A) is a regulatory metabolite of stress conditions. It is hydrolyzed to two ADP by this enzyme. Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase. [Cellular processes, Adaptations to atypical conditions].	0
NZ_CP009863.1\|WP_004192048.1\|841412_843038_-\|sensor-histidine-kinase	gnl\|CDD\|225827	COG3290, CitA, Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms].	7.63459e-173
NZ_CP009863.1\|WP_004222649.1\|849286_851644_-\|DNA-polymerase-II	gnl\|CDD\|235595	PRK05762, PRK05762, DNA polymerase II; Reviewed.	0
NZ_CP009863.1\|WP_002888347.1\|844906_845446_+\|citrate-lyase-holo-[acyl-carrier-protein]-synthase	gnl\|CDD\|163145	TIGR03124, citrate_citX, holo-ACP synthase CitX. Members of this protein family are the CitX protein, or CitX domain of the CitXG bifunctional protein, of the citrate lyase system. CitX transfers the prosthetic group 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA to the citrate lyase gamma chain, an acyl carrier protein. This enzyme may be designated holo-ACP synthase, holo-citrate lyase synthase, or apo-citrate lyase phosphoribosyl-dephospho-CoA transferase. In a few genera, including Haemophilus, this protein occurs as a fusion protein with CitG (2.7.8.25), an enzyme involved in prosthetic group biosynthesis. This CitX family is easily separated from the holo-ACP synthases of other enzyme systems. [Energy metabolism, Fermentation, Protein fate, Protein modification and repair].	5.54697e-86
NZ_CP009863.1\|WP_002888373.1\|857186_857954_+\|DedA-family-protein	gnl\|CDD\|223659	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown].	1.35562e-48
NZ_CP009863.1\|WP_004145972.1\|856212_857058_+\|arabinose-operon-transcriptional-regulator-AraC	gnl\|CDD\|236717	PRK10572, PRK10572, arabinose operon transcriptional regulator AraC.	0
NZ_CP009863.1\|WP_002888329.1\|835931_837218_-\|peptidylprolyl-isomerase-SurA	gnl\|CDD\|236758	PRK10770, PRK10770, peptidyl-prolyl cis-trans isomerase SurA; Provisional.	0
NZ_CP009863.1\|WP_002888353.1\|851819_852515_-\|L-ribulose-5-phosphate-4-epimerase	gnl\|CDD\|236181	PRK08193, araD, L-ribulose-5-phosphate 4-epimerase AraD.	0
NZ_CP009863.1\|WP_002888345.1\|843362_844727_+\|2-hydroxycarboxylate-transporter-family-protein	gnl\|CDD\|377030	pfam03390, 2HCT, 2-hydroxycarboxylate transporter family. The 2-hydroxycarboxylate transporter family is a family of secondary transporters found exclusively in the bacterial kingdom. They function in the metabolism of the di- and tricarboxylates malate and citrate, mostly in fermentative pathways involving decarboxylation of malate or oxaloacetate.	4.87969e-169

>NZ_CP009863.1|WP_004192048.1|841412_843038_-|sensor-histidine-kinase
MKLSFQYKLFISLVAFFSVLFIALGIYYYFDASRQLYQEMSARAKIQAEEIALMPNLRQQVSRHDPQAIQAFMQQIAAHSDASFIVIGDRQGVHLFHSVHPEWVGTRLVGGDNQAVLEGKSITTIRKGGLGVSLRSKTPIVDDAGRVIGIVSVGYLTSYLDSITLTKVINIFIAAVLLLIALFIFSWYFTRSIKKQIFSLEPREIGLLVRQQKAMMESIFEGVIVIDRQRRIEVINHAARSLLGLSQPARQLRGQSIDSVISPQPFFASGDMLERDTHDELCRFNQLTVLASRVRIMLENTLQGWVITFRDRNEINALTAQLSQVKRYVDNLRIMRHEQLNRMTTLSGLLHMGHYDEAIRYIQAQSEHAQELLDFISSHFHSPTLCGLLLGKATRAREKGVALSFDPACRIDRPLPSLMESELISIIGNLLDNAIEATQRAELPHEPVEVLIQLNARELIIEVADRGVGIRPDIRERIFERGVTTKTRGDHGIGLYLIEHYVTQAGGTIEVADNAPRGTIFTLFIPADAHACPQPEVHDAS
>NZ_CP009863.1|WP_023279867.1|840724_841423_-|response-regulator
MHHDLVDVLIIEDESELARLHAELVQKHPRLRLAGMAASLAQARQLLHATPPQLVLLDNYLPDGKGVTLMTDPALATSQCSVIFITAASDMETCSQAIRNGAFDYILKPVSWKRLSQSLERFIQFYDQQREWKIVDQQNVDSLYQLQAKNYRVDSGSKGIEEKTLALVQGLFSGREAHCFSVDEVVSAVGLSKTTARRYLEHGVETGFLEVEMLYGKIGHPRRLYRRAKVKS
>NZ_CP009863.1|WP_002888332.1|839864_840692_+|co-chaperone-DjlA
MQYLGKVIGVAVALLMGGGFWGVVLGFLVGHMFDRARSRRLNLFANQQERQSLFFSTTFEVMGHLTKSKGRVTEADIHVANVLMDRMNLHGASRTAAQQAFRDGKADNYPLREKMRQLRSVCFGRFDLIRMFLEIQLQAAFADGELHPNEREVLFVIADELGISRAQFDQFLRMMQGGAQFGGGSQQRSYGQHGGNAGWQQAQRGPTLEDACNVLGVKPTDDAATVKRAYRKLMNEHHPDKLVAKGLPPEMMEMAKQKAQEIQKAWELIKEQRGF
>NZ_CP009863.1|WP_004147026.1|837272_839621_-|LPS-assembly-protein-LptD
MKKRIPSLLATMIASALYSQQGLAADLATQCMLGVPSYDRPLVEGRPGDLPVTINADHAKGNYPDNAVFTGNVDINQGNSRLRADEVQLHQQQAAGQAQPVRTVDALGNVHYDDNQVILKGPKAWSNLNTKDTNVWQGDYQMVGRQGRGTADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKLGSVPIFYSPYLQLPVGDKRRSGFLIPNAKYSTKNGVEFSLPYYWNIAPNFDATITPHYMNKRGGVMWENEFRYLTQLGSGLTEFDYLPSDKVYEDDHSSDSNSRRWLFYWNHSGVIDQVWRLNADYTKVSDPDYFNDFSSKYGSSTDGYATQKFSAGYVNQNFDATVSTKQFQVFDRESSNSYSAEPQLDVNYYQNDVGPFDTHLYGQVAHFVNSNNNMPEATRVHFEPTINLPLSNGWGSLNTEAKLLATHYQQSNLDKYNAANGTDYKESVSRVMPQFKVDGKMVFERDLQEGFTQTLEPRVQYLYVPYRDQSEIGNYDSTLLQSDYTGLFRDRTYSGLDRIASANQVTTGLTSRVYDAAAVERFNISVGQIYYFTESRTGDDNINWENNDTTGSLVWAGDTYWRIADEWGLRGGIQYDTRLDNVATGNGTIEYRRDENRLVQLNYRYASPEYIQATLPSYSTAAQYKQGISQVGMTASWPIVDRWSVVGAYYYDTNTRKAANQMLGVQYNSCCYAIRLGYERKVNGWNSNDNGGESKYDNTFGINIELRGLSSNYGLGTQQMLRSNILPYQSSL
>NZ_CP009863.1|WP_002888329.1|835931_837218_-|peptidylprolyl-isomerase-SurA
MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDGLMQSVKLNAGQAGQQLPDDATLRHQILERLIMDQIVLQMGQKMGVKISDDQLDQAIANIAKQNNMTLDQMRSRLAYEGINYNTYRNQIRKEMLISEVRNNEVRRRITVLPQEVEALAKQIGDQNDASTELNLSHILIPLPENPTSDEVAAAQEQANSIVEQARNGANFGKLAITYSADQQALKGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGGTQNISVTEVHARHILLKPSPIMNDAQAQAKLEQIAAEIKSGKITFAQAAKTYSEDPGSANQGGDLGWATPDIFDPAFRDALMRLNKGQTSGPVHSSFGWHLIELLDSRQVDRTDAAQKDRAYRMLMNRKFSEEAATWMQEQRASAYVKILSN
>NZ_CP009863.1|WP_002888327.1|834936_835926_-|4-hydroxythreonine-4-phosphate-dehydrogenase-PdxA
MPETRKVVITPGEPAGIGPDLVVQLAQRDWPVELVICADGALLTDRAKRLGLPLSLLPYDPAQPPVPQRAGTLTLLNVPLNVPAEPGVLNVQNGAYVVETLARACDGCLSGEFAALVTGPVHKGNINDAGIAFTGHTEFFEERAKASKVVMMLATEELRVALVTTHLPLKAISEAITPELLREIITILDHDLRTKFGIAQPHVLVCGLNPHAGEGGHMGTEEIDTIIPVLEEMRAKGMNLSGPLPADTLFQPKYLDHADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGQGKADVGSFITALNLAIKMIVNTQ
>NZ_CP009863.1|WP_002888324.1|834118_834940_-|16S-rRNA-(adenine(1518)-N(6)/adenine(1519)-N(6))--dimethyltransferase-RsmA
MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEIGPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTMNFGELAEKMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRLSVMAQYYCQVIPVLEVPPSAFTPPPKVDSAVVRLVPHSTMPYPVKEIRVLSRITTEAFNQRRKTIRNSLGNLFSVEVLTELGIDPAMRAENISVAQYCLMANWLSDNLPTKES
>NZ_CP009863.1|WP_002888323.1|833738_834116_-|Co2+/Mg2+-efflux-protein-ApaG
MIHSPRVCVQVQSVYIESQSSPEEERYVFAYTVTIRNLGRSQVQLLGRYWLITNGHGRETEVQGEGVVGEQPHIPAGGEYQYTSGAVIETPLGTMQGHYEMIDIDGAPFRIEIPVFRLAVPTLIH
>NZ_CP009863.1|WP_023279868.1|832885_833734_-|bis(5'-nucleosyl)-tetraphosphatase-(symmetrical)-ApaH
MSTYLIGDVHGCYDELIALLAQVEFDPRRDTLWLTGDLVARGPGSLEVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLKPLLEAPDADELLNWLRRQPLLQVDEEKKLVMAHAGITPQWDLETAQQCARDVEAVLSSDSYPFFLDAMYGDMPNHWSNELSGLARLRFISNAFTRMRYCFPNGQLDMYSKEAPEDAPAPLKPWFAIPGPVSNAYSIAFGHWASLEGRGTPEGIYALDTGCCWGGELTCLRWEDKQYFTQPSNRQKSLDEGEAAAS
>NZ_CP009863.1|WP_002888320.1|832154_832634_+|type-3-dihydrofolate-reductase
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVVMGRLTWESIGRPLPGRKNIVISSKPGSDDRVQWVSSVEEAIAACGDVEEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYDPDEWESVFSEFHDADAQNSHSYCFEILERR
>NZ_CP009863.1|WP_002888345.1|843362_844727_+|2-hydroxycarboxylate-transporter-family-protein
MSTTDNAFSATLEPIDTPKTTLKQRWWHIMDNWKVGIVPLPLFLLAGGLIALDCLGGKLPSDIVVMVATLAFFGFACGEFGKRLPVLGKLGAAAICATFIPSALVHYGLLPDVVIESTTKFYKSTNILYLYICCIIVGSIMSMNRTTLIQGFLKIFFPMLCGEVVGMLVGIGVGTLLGMEPFQVFFFIVLPIMAGGVGEGAIPLSMGYAALMHMEQGVALGRVLPMVMLGSLTAIVISGCLNQLGKRFPHLTGEGQLMPNRSHETRSLSESEGVSGKTDVGTLASGALLAVLLYMMGMLGHKLIGLPAPVGMLFLAVLLKLANVVSPRLQEGSQMVYKFFRTAVTYPILFAVGVAITPWQELVNAFTLTNLLVIVSTVSALVATGFLVGKKIGMHPIDVAIVSCCQSGQGGTGDVAILTAGNRMSLMPFAQIATRIGGAINVSLGLLFLSHYLA
>NZ_CP009863.1|WP_002888347.1|844906_845446_+|citrate-lyase-holo-[acyl-carrier-protein]-synthase
MSVDTPAQAGVSIDALLAAKEQRAARQADWLAHYQQPVISLTLVTPGAVKDSIRYRNMMGVALQACDQLLWKHRWQTLDRQVLWLPTGPEALWCVAHPASEIKAMCSTLEQSHPLGRLWDIDVICPQNGLVGRQSLGESQRRCLLCDEPAHACARSRRHDTDLVVARVEQMIDAWFARD
>NZ_CP009863.1|WP_004145980.1|845520_846180_-|bifunctional-tRNA-pseudouridine(32)-synthase/23S-rRNA-pseudouridine(746)-synthase-RluA
MAMENYNPPQDPWLVILYQDEHIMVVNKPSGLLSVPGRLEEHKDSVMTRIQRDFPQAESVHRLDMATSGVIVVALNKAAERELKRQFREREPKKQYVARVWGHPQPAEGLVDLPLICDWPNRPMQKVCYETGKAAQTEYEVLEYAEDNTARVRLKPITGRSHQLRVHMLALGHPILGDRFYATPEALAMAPRLLLHAETLTITHPAYGNAMTFRAPIDF
>NZ_CP009863.1|WP_032411667.1|846192_849099_-|RNA-polymerase-associated-protein-RapA
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDTITSHEGWQLHVDKVNEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLHIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQHDAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIEQLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQQNYRPVADAVALLLAGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELISMLMDRHGTSRLLFRNTRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHDELINYLAAPESTDGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSMNLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATPVRMLLDKNGNNLAAQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQGLIDAARNEADEKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVMDALAQAGWRLDALRLIVVTHQ
>NZ_CP009863.1|WP_004222649.1|849286_851644_-|DNA-polymerase-II
MTQPRAGFLLTRHWRDTPQGTELSFWLATDDGPLQVTLPPQESVAFIPEAQRAQAERLLQGEKGLRFAPLALKDFHRQPIVGLYCRAHRQLMRLEKMLRDSGVTVYEGDIRPPERYLMERFITAPVWVEGETRGSQLVNARMKPNPDYRPPLKWVSLDIETSRHGELYCIGLEGCGQRVVYMLGPEPETPPDVDFELVFIASRPLLLEKLNAWFAEHDPDVLIGWNVVQFDLRVLQKHAERYRIPLRLGRGNSELEWREHGFKNGVFFAQANGRLIIDGIDALKSAFWNFSSFSLEAVARELLGEGKAIDNPWDRMDEIERRFHEDKPALAIYNLQDCELVTRIFHKTEIMPFLLERATVNGLPADRHGGSVAAFSHLYFPRMHRLGYVAPNLGDVPPQASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGLAQPDDQHSIEGFLGARFSRDKHCLPGIVSQIWHGRDEAKRQHNKPLSQALKIIMNAFYGVLGTSACRFFDPRLASSITMRGHAIMRQTKALIEAKGYDVIYGDTDSTFVWLKRPHSEAQAAEIGRELVSDVNAWWAQELSKSQLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGMIQEGDAQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNQPYQDYVRETIARLMNGELDEQLVYRKRLRRPLAEYQRNVPPHVRAARLADEHNLKLGRAQQYQQRGTIKYVWTTSGPEPVDYQQSPLDYDHYLTKQLQPVAEGILPFVNDDFATIVTGQLGLF
>NZ_CP009863.1|WP_002888353.1|851819_852515_-|L-ribulose-5-phosphate-4-epimerase
MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDREKGVFVIKPSGVDYRVMTADDMVVVSLESGEVVEGNKKPSSDTPTHRLLYQAFPTLGGIVHTHSRHATIWAQAGQSIPATGTTHADYFYGPVPCTRLMTDAEINGDYEWETGNVIVETFRQQGIDPAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEIAYMGIFCRQLAPQLPAMQQTLLDKHYLRKHGAKAYYGQ
>NZ_CP009863.1|WP_004177424.1|852652_854155_-|L-arabinose-isomerase
MTIFDNYEVWFVIGSQHLYGPEALRQVTKHAEHVVNSLNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGLVVWLHTFSPAKMWINGLTILNKPLLQFHTQYNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHSVVTGHWQDKEAHQRIGGWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDISALVDEYESSYRLTPAAQVHGEKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFDNGNDLVLGSHMLEVCPTIATAEKPILDVQPLGIGGKADPARLIFNTQTGPAIVASLIDLGDRFRLLVNTIETVPTPHDLPKLPVANALWKAQPDLRTASEAWIIAGGAHHTVFSHALNLDDMRQFAELHDIELTVIDNDTRLPSFKDALRWNEVYYGSKR
>NZ_CP009863.1|WP_023279864.1|854165_855875_-|ribulokinase
MAIAIGLDFGSDSVRALAVECASGAELATSVEWYPRWREGQYCDGANNRFRHHPRDYIESMEAALKSVLASLSAEQRADVVGIGVDSTGSTPAPVDAEGNVLALREEFADNPNAMFVLWKDHTAVEEAEAITRLCHQPGKEDYSRYIGGIYSSEWFWAKILHVTREDSAVAQAAASWVELCDWVPALLSGTTRPQDLRRGRCSAGHKSLWHESWGGLPPASFFDELDPIINQHLAWPLFTDTWTADVPVGTLSAEWAQRLGLSQTVAISGGAFDCHMGAVGAGAQPNALVKVIGTSTCDILIADKESVGERTVKGICGQVDGSVVPHFIGMEAGQSAFGDIYAWFGRILGWPLEQLAQQQPALREQIKASQKQLLPALTEAWANNPSLEHLPVVLDWFNGRRTPNANQRLKGVITDLNLATDAPALFGGLIAATAFGARAIMECFTEQGIPVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAGVYEDIPAAQQRMASQVETTLQPRPAQAQRFEQLYQRYQQWSVSAEQHYLPSAAKAEKAPQSQAALTH
>NZ_CP009863.1|WP_004145972.1|856212_857058_+|arabinose-operon-transcriptional-regulator-AraC
MAETQNDPLLPGYSFNAHLVTGLTPIEAQGYLDFFIDRPLGMKGYILNLTIRGEGVINNHGEQFVCRPGDMLLFPPGEIHHYGRHPDASEWYHQWVYFRPRAYWHEWLNWPTIFAQTGFFRPDEQWQARFGELFGQIVDAGQGAGRYSELLAINLLEQLLLRRMEAINESLHPPLDNRVRDACQYISDHLADSHFDIASVAQHVCLSPSRLSHLFRQQLGVSVLGWREDQRISQAKLLLSTTRMPIATVGRNVGFEDQLYFSRVFKKCTGASPSEFRAGCE
>NZ_CP009863.1|WP_002888373.1|857186_857954_+|DedA-family-protein
MQALLEHFITQSTVYSLLAVMLVAFLESLALVGLILPGTVMMAGLGALIGGGEVNFWQAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFMKKNRALLEKTEHALHQHSMITILIGRFVGPTRPLVPMVAGMLDLPVAKFVLPNIIGCLLWPPLYFLPGILAGAAIDIPADENSASFKWLLLGAALLAWLAGWLCWRLWRSAKTSGDRLTRWLPRGRLLWLSPLMVALAATALTFVFRHPLMPVYLAILHKVIAR

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Crispr_ID: NZ_CP009863_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009863_2

1706036-1706113

Orphan

Consensus_repeat	Method
AAGGCGTCAGCCGCCGCCCGGCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP009863_2

>merge|NZ_CP009863|2|1706036-1706113|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCAAAATAACCGCGCAATAGCACCGTAGGCCGGGCAAGGCGTTAGCCGCCGCCCGGCA

>NZ_CP009863|2|2|1706036-1706113|CRISPRCasFinder
AAGGCGTCAGCCGCCGCCCGGCA	AAATAACCGCGCAATAGCACCGTAGGCCGGGC
AAGGCGTTAGCCGCCGCCCGGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009863.1\|WP_004142100.1\|1710493_1711249_+\|malonyl-ACP-O-methyltransferase-BioC	unknown	unknown	gnl\|CDD\|182340
NZ_CP009863.1\|WP_002895575.1\|1706265_1706742_-\|kinase-inhibitor	unknown	unknown	gnl\|CDD\|182339
NZ_CP009863.1\|WP_004142122.1\|1696154_1697438_-\|putative-acyl-CoA-thioester-hydrolase	unknown	unknown	gnl\|CDD\|236709
NZ_CP009863.1\|WP_004179084.1\|1693194_1695882_+\|cation-transporting-P-type-ATPase	unknown	unknown	gnl\|CDD\|319775
NZ_CP009863.1\|WP_009486308.1\|1711241_1711964_+\|ATP-dependent-dethiobiotin-synthetase-BioD	unknown	unknown	gnl\|CDD\|234625
NZ_CP009863.1\|WP_073553397.1\|1697592_1698912_+\|imidazolonepropionase	unknown	unknown	gnl\|CDD\|236478
NZ_CP009863.1\|WP_004147672.1\|1704104_1705487_+\|amino-acid-permease	unknown	unknown	gnl\|CDD\|182566
NZ_CP009863.1\|WP_004183465.1\|1692711_1693143_+\|universal-stress-protein	unknown	unknown	gnl\|CDD\|185353
NZ_CP009863.1\|WP_032421126.1\|1709352_1710510_+\|8-amino-7-oxononanoate-synthase	unknown	unknown	gnl\|CDD\|235655
NZ_CP009863.1\|WP_021468185.1\|1702479_1704006_+\|histidine-ammonia-lyase	unknown	unknown	gnl\|CDD\|236484
NZ_CP009863.1\|WP_032411914.1\|1711905_1712628_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|223487
NZ_CP009863.1\|WP_002895358.1\|1699926_1700652_+\|histidine-utilization-repressor	unknown	unknown	gnl\|CDD\|184961
NZ_CP009863.1\|WP_023282312.1\|1715608_1716706_-\|two-component-system-sensor-histidine-kinase-PmrB	unknown	unknown	gnl\|CDD\|236751
NZ_CP009863.1\|WP_012737676.1\|1698908_1699865_+\|formimidoylglutamase	unknown	unknown	gnl\|CDD\|234974
NZ_CP009863.1\|WP_002895580.1\|1708315_1709356_+\|biotin-synthase-BioB	unknown	unknown	gnl\|CDD\|185063
NZ_CP009863.1\|WP_032421662.1\|1706812_1708102_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	unknown	unknown	gnl\|CDD\|181189
NZ_CP009863.1\|WP_160552414.1\|1701544_1702483_+\|urocanate-hydratase	unknown	unknown	gnl\|CDD\|235448
NZ_CP009863.1\|WP_004147662.1\|1691092_1692178_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|273776
NZ_CP009863.1\|WP_023282311.1\|1713338_1715360_+\|excinuclease-ABC-subunit-B	unknown	unknown	gnl\|CDD\|235395
NZ_CP009863.1\|WP_032411915.1\|1712714_1712927_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP009863.1\|WP_004142100.1\|1710493_1711249_+\|malonyl-ACP-O-methyltransferase-BioC	gnl\|CDD\|182340	PRK10258, PRK10258, biotin biosynthesis protein BioC; Provisional.	1.7976e-160
NZ_CP009863.1\|WP_002895575.1\|1706265_1706742_-\|kinase-inhibitor	gnl\|CDD\|182339	PRK10257, PRK10257, putative kinase inhibitor protein; Provisional.	7.58373e-117
NZ_CP009863.1\|WP_004142122.1\|1696154_1697438_-\|putative-acyl-CoA-thioester-hydrolase	gnl\|CDD\|236709	PRK10531, PRK10531, putative acyl-CoA thioester hydrolase.	0
NZ_CP009863.1\|WP_004179084.1\|1693194_1695882_+\|cation-transporting-P-type-ATPase	gnl\|CDD\|319775	cd02080, P-type_ATPase_cation, P-type cation-transporting ATPase similar to Exiguobacterium aurantiacum Mna, an Na(+)-ATPase, and Synechocystis sp. PCC 6803 PMA1, a putative Ca(2+)-ATPase. This subfamily includes the P-type Na(+)-ATPase of an alkaliphilic bacterium Exiguobacterium aurantiacum Mna and cyanobacterium Synechocystis sp. PCC 6803 PMA1, a cation-transporting ATPase which may translocate calcium. The P-type ATPases, are a large family of integral membrane transporters that are of critical importance in all kingdoms of life. They generate and maintain (electro-) chemical gradients across cellular membranes, by translocating cations, heavy metals and lipids, and are distinguished from other main classes of transport ATPases (F- , V- , and ABC- type) by the formation of a phosphorylated (P-) intermediate state in the catalytic cycle.	0
NZ_CP009863.1\|WP_009486308.1\|1711241_1711964_+\|ATP-dependent-dethiobiotin-synthetase-BioD	gnl\|CDD\|234625	PRK00090, bioD, ATP-dependent dethiobiotin synthetase BioD.	3.26446e-105
NZ_CP009863.1\|WP_073553397.1\|1697592_1698912_+\|imidazolonepropionase	gnl\|CDD\|236478	PRK09356, PRK09356, imidazolonepropionase; Validated.	0
NZ_CP009863.1\|WP_004147672.1\|1704104_1705487_+\|amino-acid-permease	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP009863.1\|WP_004183465.1\|1692711_1693143_+\|universal-stress-protein	gnl\|CDD\|185353	PRK15456, PRK15456, universal stress protein UspG; Provisional.	1.69931e-44
NZ_CP009863.1\|WP_032421126.1\|1709352_1710510_+\|8-amino-7-oxononanoate-synthase	gnl\|CDD\|235655	PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.	0
NZ_CP009863.1\|WP_021468185.1\|1702479_1704006_+\|histidine-ammonia-lyase	gnl\|CDD\|236484	PRK09367, PRK09367, histidine ammonia-lyase; Provisional.	0
NZ_CP009863.1\|WP_032411914.1\|1711905_1712628_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|223487	COG0410, LivF, ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism].	4.71801e-74
NZ_CP009863.1\|WP_002895358.1\|1699926_1700652_+\|histidine-utilization-repressor	gnl\|CDD\|184961	PRK14999, PRK14999, histidine utilization repressor; Provisional.	3.37417e-172
NZ_CP009863.1\|WP_023282312.1\|1715608_1716706_-\|two-component-system-sensor-histidine-kinase-PmrB	gnl\|CDD\|236751	PRK10755, PRK10755, two-component system sensor histidine kinase PmrB.	0
NZ_CP009863.1\|WP_012737676.1\|1698908_1699865_+\|formimidoylglutamase	gnl\|CDD\|234974	PRK01722, PRK01722, formimidoylglutamase; Provisional.	1.02886e-177
NZ_CP009863.1\|WP_002895580.1\|1708315_1709356_+\|biotin-synthase-BioB	gnl\|CDD\|185063	PRK15108, PRK15108, biotin synthase; Provisional.	0
NZ_CP009863.1\|WP_032421662.1\|1706812_1708102_-\|adenosylmethionine--8-amino-7-oxononanoate-transaminase	gnl\|CDD\|181189	PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated.	0
NZ_CP009863.1\|WP_160552414.1\|1701544_1702483_+\|urocanate-hydratase	gnl\|CDD\|235448	PRK05414, PRK05414, urocanate hydratase; Provisional.	0
NZ_CP009863.1\|WP_004147662.1\|1691092_1692178_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	6.18674e-67
NZ_CP009863.1\|WP_023282311.1\|1713338_1715360_+\|excinuclease-ABC-subunit-B	gnl\|CDD\|235395	PRK05298, PRK05298, excinuclease ABC subunit UvrB.	0

>NZ_CP009863.1|WP_004147672.1|1704104_1705487_+|amino-acid-permease
MQQQHKPHLLRGLNARHIRFIALGSAIGTGLFYGSASAIKAAGPAVLLAYLIGGAAVFIVMRALGEMAVRNPVSGSFGSYARQYLGPLAGFITGWTYTFEMVIVALADVTAFGIYMGLWYPDVPRWIWILSIIFFIGAMNLCNVRVFGEMEFWLSLVKVVAIIAMMLAGAGIIFFGFGHSFPATGLENLWSHGGFAPNGWQGVIASLGIVMFAFGGVEIIGVTAAEAKDPKKVIPQAINTIPLRIILFYVCTLAVLMAIFPWNSFGEQGSPFVLIFDGLGIPAAATILNIIVISASISAINSDIFGAGRMMYGMSKEGLAPKSFQRIASNGVPWMTVVVMGGALLAAVVLNYLIPEQVFVLIASLAAFATVWVWLMILLSHFAMRRGLSAEERSQIAFPIPFWPVAPLLTLLFMGLVIAVLGMFAETRMALIAGLVWLGLLTVVWYARVRKTALQVATEQ
>NZ_CP009863.1|WP_021468185.1|1702479_1704006_+|histidine-ammonia-lyase
MKSLTLIPGQLSLSQLRDIYSHPVNITLDSGAFAAIDESVACVNAILAEGRTAYGINTGFGLLAQTRISTEDLENLQRSLVLSHAAGVGEPLDDDLARLIMVLKINSLSRGFSGIRLSVIQALIGLVNAGVTPWIPAKGSVGASGDLAPLAHMSLTLLGEGKARVRGGEWLPATEALRQVGLEPITLAAKEGLALLNGTQASTAFALRGLFEAEDLFASAVVCGALTTEAALGSRRPFDARIHEVRGQRGQIDAAALYRHLLTDDSAISQSHHNCSKVQDPYSLRCQPQVMGACLTQIRQAAEVLLAEANAVSDNPLVFAAENDVISGGNFHAEPVAMAADNIALAIAEIGSLSERRIALMMDSHMSQLPPFLVKNGGVNSGFMIAQVTAAALASENKALSHPHSVDSLPTSANQEDHVSMAPAAGRRLWAMAENTRGVLAVEWLAAAQGLDMREGLTTSPLLEEARHLLRERVPHYTQDRYFAPDIDNAIALLAARHLTRLLPAVLH
>NZ_CP009863.1|WP_160552414.1|1701544_1702483_+|urocanate-hydratase
MKRGVRPDMVTDQTSAHDPLHGYLPKGWSWEEYQQKAESDPQGTILAAKRSMADHVQAMLAFHEMGVPTFDYGNNIRQMAQEVGVSNAFDFPGFVPAYIRPLFCRGIGPFRWVALSGDPQDIYKTDAKVKEIIKDDQHLHHWLDMARERISFQGLPARICWVGLEWRQKLGLAFNEMVRSGEVSAPIVIGRDHLDSGSVASPNRETEAMRDGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHSGMVIVCDGTDEAAARIARVLRNDPATGVMRHADAGYEIAIECAAEQGLNLPMVAATQGNAK
>NZ_CP009863.1|WP_002895358.1|1699926_1700652_+|histidine-utilization-repressor
MFAQQPRSAPAPFYEKVKQAISEKIHSGVWRPHDRIPSEAELVAQFGFSRMTINRALRELTDEGLLVRLQGVGTFVAEPKGQSALFEVRSIAAEIVARHHQHRCEVLLLEETRADHIQATALSVPEGTRIFHSLMVHYENEVPVQIEDRCVNAAVVPDYLHQDYTATTPHDYLSLIAPLTEGEHIVEAVQATAEECALLHIHAHDPCLLIRRRTWSTTHIVSHARLLFPGSRYRLQGRFGS
>NZ_CP009863.1|WP_012737676.1|1698908_1699865_+|formimidoylglutamase
MMLWQATPASLWQGRDDSAEAPNALRLFQTIARAERFAPQEMPGDIALLGFACDEGVRRNKGRTGAADGPATLRRALANMASHQGHDRCVDMGTISVDGEQLEAAHQALREAVADCQRAGKRTLVLGGGHETAFGHGAGVLDAFPGEKVGIINLDAHLDLRFADCASSGTPFRQLALECDAQQRGFHYTCIGVSRAANTQALWDEAARRQVAIVEDLEVLTAFETRVLPELERNIAQFDRLYLTIDLDVLPAREMPAVSAPAALGVPLATLLRIVEPLCRSGKLQAVDLVEFNPLFDIDGQGARTAARVAWQIAHWWR
>NZ_CP009863.1|WP_073553397.1|1697592_1698912_+|imidazolonepropionase
MVFSHKKITFPCAIVDFTGVMKINVYTTHDKLNAMTEATSELVIWRNGRLATLNPDHAQPYGLLERHALLVRDGRIAAIVAEDDVPSGRSIDLEGRLVTPGLIDCHTHLVFGGSRAQEWEQRLNGVSYQTISASGGGINSTVRATRDSSEAELLALAQPRLERLLREGVTTLEIKSGYGLDLPNERKMLRVARQLADHNGVELSATLLSAHATPPEYQGDADGYITLVCETILPTLWQEGLFESVDVFCENVGFSPQQTERVFQAAQALGIPVKGHVEQLSSLGGAQLVSRYHGLSADHIEYLTEEGVAAMRESGTVAALLPGAFYFLNETRKPPVELLRKYQVPMAVATDFNPGTSPFASLHLAMNMACVKFGLTPEEAWAGVTRHAARALGRQASHGQLAPGFVANFAIWDAEHPVEMVYEPGRSPLWHRVVQGELQ
>NZ_CP009863.1|WP_004142122.1|1696154_1697438_-|putative-acyl-CoA-thioester-hydrolase
MNTYSVSRLALALAFGVTLSACSSTPADQQPSTQTAPGTTARPILNAEEAKNFTPAAYFQSLAPNAAAWTPSAISLPAQPDFIVGPAGTQGVTHTTIQAAVDAAIARHSNRRLYIAIMPGEYPGTVYVPAAPGALTLYGTGDKPIDVKISEAIDSEMDRNTWRRLVNPGGKYMPGKPAWYMFDSCQSKSAATVGVMCSAVFWSQNNGLQLQNLTIANNLGDSVDAGTHQAVALRSDGDQVQINKVNILGRQNTFFVTNSGVQNRLQDNRQTRTLVTNSYIEGDVDIVSGRGAVVFDNTDFRVVNSRTQKEAYVFAPATLKSVTYGFLATNSRFTASGDNVAQLGRALDVDGNSNGQVVIRDSAINEGFNIAQPWAAAVGSGRPFSGNTGSADDKGNLQRNLNDNGFNRMWEYNNRGVGSTVVAEPKQ
>NZ_CP009863.1|WP_004179084.1|1693194_1695882_+|cation-transporting-P-type-ATPase
MNTDKPGAPYYQRSVEETLASVQSSPEGISGTEAATRLQQYGENALPQKPGKPAWLRFIAHFNDVLIYVLLAAALLKAVMGHWIDMAVILAVAVVNALIGFIQESNAEKSLQSIRNMLSSEAVAIRQGNHETIPTTSLVPGDIVVIRAGDRIPADLRVIEAHNLRVEEAILTGESTVVEKTTEPLSGDLPLGDRSNLLFSGTTVSSGAGKGIVVATGGDTELGHINQMMAGIEKHRTPLLVQMDKLGKAIFILILVMMAALFVFSLLFRDMPVSELMLSLISLAVASVPEGLPAIISIILSLGVQAMARQKAIIRKLPTVETLGAMTVICSDKTGTLTMNEMTVKAVITADSVYRVEGDSYEPVGKIHAIDDPTPVTIAPGSLFERYLRTIDLCNDSQLIKEESGLWKITGGPTEGALKVLAAKVTLPPLTSELRSKIPFDSQYKYMSTLYRLGEEEVVLVTGAPDVLFRLCQYQQSDSGLQPLDLPYWEGKIEEYAREGLRMVAAAWKPAAAGQTELTHQDLQQGVILLGVAGMMDPPRPEAITAIADCLQAGIRVKMITGDHPQTAMSIGKMLGIGNAGNAITGRELEVMDDAQLSVAAQQFDIFARTSPEDKFRLVQALQSKKEIVGMTGDGVNDAPALKQADVGVAMGIKGTEVTKEAADMVLTDDNFATIASAVREGRRVYDNLKKTILFVMPTNLAQGLLIVIALLAGNVLPLTPVLILWMNMATSATLSFGLAFEAGEKNIMRRPPRDPKIHVMDGFAIWRVAFVGSMIAVSAFILEAWLQPRGYSPEFIRTVLLQTLVTAQWFYMLNCRVSDGFSLTKGLLANKGIWIVSGVLLLLQLLIIYAPFMQMLFGTTGLPFRYWVITFIIGFAMFLIVELEKPLTRKWRSA
>NZ_CP009863.1|WP_004183465.1|1692711_1693143_+|universal-stress-protein
MYKNIVVPVDVFDAGLADKALSHAKFLAQHSAGQIHLIHVIPAFSPVLTRGFISDARKMEDHLLNTAKEKLSELVKKNGLAEDASHLYVRSGNVRDQVIALADELKADVVIVGSRNPGIQTHLLGSEAANIVRYAHVPVFVVR
>NZ_CP009863.1|WP_004147662.1|1691092_1692178_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MNRYFSLIPVVIIFTTACDQKAPTVESAPRMVKVAQVTAVGNTQQRTFPARIESGDSTELSFKRGGQVESLDIRQGASVAQGQTLARLNAREAQQRVNERQTAATLAQRQFDRFQTLAGRQAISQAEMDVQRANRDAANAALKIAREELAQMSLIAPFSGIAAGVHIRNHQVVAAGQPVITLTRTDLLDVVFSIPENLFTSLDIRNTAYRPVVRINTLPGREFTAEYKEHTGSSDNSTLTWQIVLTMPRPDDFPAVGGVSGTVTVNLGNLPASAGRETLIVPAEAVFNPDNRPKNEPVVWVVKGDNAHRYLEERKVTVGEVTSQGVAITDGLRAGEQVVAAGVSELHAGQPVRVWTRERGL
>NZ_CP009863.1|WP_002895575.1|1706265_1706742_-|kinase-inhibitor
MKLISHDLQDGGKLPNRHVFNGMGYDGDNISPHLMWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVANLPADTRVLPQGAGSGQAELPEEAVQTRTDFGKAGYGGAAPPKGETHRYIFTVHALDVEKIEVDAEASGAMVGFNVHFHSLASASITALFS
>NZ_CP009863.1|WP_032421662.1|1706812_1708102_-|adenosylmethionine--8-amino-7-oxononanoate-transaminase
MTLDDLTFDRRHIWHPYTSMTSPLPVYPVVSAHGCELSLAGGEQLVDGMSSWWAAIHGYNHPRLNAALKGQIDQMSHVMFGGITHPPAVALCRQLVAMTPASLECVFLADSGSVAVEVAMKMALQYWQAKGEPRRRFLTFRNGYHGDTFGAMSVCDPQNSMHSLWQGYLPDNLFAPAPQSRFDGEWDEMDMVPFARLMAAHRHEIAAVILEPIVQGAGGMRMYHPEWLKRVRKMCDREGILLIADEIATGFGRTGKLFACEHAGITADILCLGKALTGGTMTLSAAITTRTVAETISNGEAGCFMHGPTFMGNPLACAVAGESLRLLESGEWQPQVAAIEAQLQAELAPARGSALVADVRVLGAIGVVETRRPVNMATLQRFFVEQGVWIRPFGRLIYLMPPYIITPEQLTRLTRAVNQAVQDETFFSE
>NZ_CP009863.1|WP_002895580.1|1708315_1709356_+|biotin-synthase-BioB
MAHQPRWTMSQVTELFNKPLIDLLFEAQQIHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSARYKTGLEAERLMEVEQVLESARQAKNAGSTRFCMGAAWKNPNDRDMPYLEQMVKGVKALGLESCMTLGTLTDSQAQRLAEAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLDKVRDAGIKVCSGGIVGLGESVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAIARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGINPQQTAVLEGDNEQQQRLEQALLTPDTEEYYNAAAL
>NZ_CP009863.1|WP_032421126.1|1709352_1710510_+|8-amino-7-oxononanoate-synthase
MSWQQRIDRALDERRAAEAFRRRLPVTHGAGRWLEREGERWLNFSSNDYLGLSQHPAIIAAWQQGATRYGVGAGGSGHVSGYSEAHRALEEALADWLGYPRALLFISGFAANQALIAALVEKDDRIVADRLSHASLLEAASLSPAQLRRFTHNDPQQLAQLLAKPLAGEQLAVTEGIFSMDGDSAPLAAIHAATQAAGAVLLVDDAHGVGVVGDEGRGSCAAQAVRPELLVVTFGKAFGVSGAAVLCDEAMADYLLQFARHLIYSTAMPPAQAVALSAALGIIRSDEGRQRRDILAARIRQFREGMGEVSLGLTDSVSAIQPLIVGDNARALNLACRLHDAGCWATAIRPPTVPVGSARLRLTLTAAHHAEDINRLLEVLHGHSE
>NZ_CP009863.1|WP_004142100.1|1710493_1711249_+|malonyl-ACP-O-methyltransferase-BioC
MATVNKQAVAAAFGRAASGYTQHDELQRRCADLLLRQLARRDFAQVLDAGCGPGSMSRYWREAGSVVTALDLSAGMLAQAQRNDAAQHYLLGDIEALPLPDACVDLAWSNLAVQWCDDLRAAIGELYRVARPGGRVAFSTLLADSLPELNQAWQAIDDRPHANRFLSEAAVRAALSGLRATGEVHQISLPFADALSAMRSLKGIGATHLHQGRTAAPLGRGKLRELQLAWPQRQGICPLTYSLFTGVIERD
>NZ_CP009863.1|WP_009486308.1|1711241_1711964_+|ATP-dependent-dethiobiotin-synthetase-BioD
MTKRFFVTGTDTEVGKTIASSALLQAANLLGFHTAGYKPVASGSELTGDGLRNEDALALQRHSRVALRYDQVNPYTFAEPTSPHIISADEGRPIAAARLSSGLRELEGLADWVLVEGAGGWFTPLSDSLTFADWAQAEQLPVILVVGVKLGCINHAMLTAQAVRQAGLPLAGWIANDVQPPGKRHAEYLATLKNRLAAPFLGEIPWLADIAQRDDLGQYLDLRALDPALSTAPAAAHSAP
>NZ_CP009863.1|WP_032411914.1|1711905_1712628_-|ATP-binding-cassette-domain-containing-protein
MLNLQAVNHFYGNQHSLWNVDLVLRPGECIGVLGREGMGKTTLVNCIAGHLPVASGRMTWHDIGAPPQDLTPLSAQSRSAIGIGYVPQDKRIFSQLSVEENLHIALAAGKPGANASGGEIYEHFPELYALRQRKGASLSDDDQYQLALARALIVQPRLLILDEPSRGRGPRCLQKLADLLLRLNRDIGLTVLLAEQHLPFIRRVADRFCVLHRGRNVAEGDIMALNEPLLAQWITPDPAP
>NZ_CP009863.1|WP_032411915.1|1712714_1712927_-|hypothetical-protein
MDNCPQPKTTAARRLSPFAVNRVAKNFYRTIFDNYPLKAARFLLLFAPLFSVGHRKSAAPALTRPDGIGV
>NZ_CP009863.1|WP_023282311.1|1713338_1715360_+|excinuclease-ABC-subunit-B
MSKSFVLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVEGTVPRYTIYPKTHYVTPRERIVQAMEEIKLELAERRKVLLANNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTVPQIGGMYRGDRARKETLVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGAYELDKSGGEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRLRTAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNINGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILQLGQGLAKTKAKGRGKAKAVEPAGLSAVDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS
>NZ_CP009863.1|WP_023282312.1|1715608_1716706_-|two-component-system-sensor-histidine-kinase-PmrB
MALFATETWTMRHRLLLTIGAILVVCQLISVFWLWHESKEQIQLLVASAIEGHNNQKHVEHEVREAVASLLVPSLLIVGLALYISMLAVRKITRPLSRLQSELENRTPDNLTPIVLSESVPEVTAVTTALNQLVSRLNLTLDRERLFTADVAHELRTPLAGLRLHLELLAKVHGMGVDPLIQRLDQMTTSISQLLQLARVGQSFSAGSYQQVLLLDDVVKPLQDELEAMLAQRQQRLLLMDIENEAVVSGDATLIRVILRNLVENAHRYSPEGSTIRVSVKAGLMPVMAVEDEGPGIDEAKSGELSKAFVRMDSRYGGIGLGLSIVTRIAQLHDAQFFLHNRQPGPGVRAWVLFPQRGGQNVSTH

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Crispr_ID: NZ_CP009863_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009863_3

4661015-4661301

Orphan

Consensus_repeat	Method
CTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTCATTCATCCTTT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP009863_3

>merge|NZ_CP009863|3|4661015-4661301|PILER-CR
CTGACCGATAAGCCGCCTTCTTTTGGTATAGCGTCGTGGATAGTCATTCATCCTCGTCACGGGTTCAGATAGCAAAAACCCCGCCGAAGCGGGGTTTTGACATAAAAAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTCATTCATCCTTTCTCCGCTATTCGAATAGCAAAAACCCCGCCGTAGCGGGGCTTTGACATAAAAAGGTGAAACTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTCATTCATCCTTT

>NZ_CP009863|3|1|4661015-4661301|PILER-CR
CTGACCGATAAGCCGCCTTCTTTTGGTATAGCGTCGTGGATAGTCATTCATCCTCG	TCACGGGTTCAGATAGCAAAAACCCCGCCGAAGCGGGGTTTTGACATAAAAAGGTGAAA
CTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTCATTCATCCTTT	CTCCGCTATTCGAATAGCAAAAACCCCGCCGTAGCGGGGCTTTGACATAAAAAGGTGAAA
CTGACCGATAAGCCGCGTTCTTTTGGTATAGCGTCGTGGACAGTCATTCATCCTTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009863.1\|WP_002917960.1\|4666415_4667987_+\|galactarate-dehydratase	unknown	unknown	gnl\|CDD\|274491
NZ_CP009863.1\|WP_002917963.1\|4668041_4668992_-\|sugar-kinase	unknown	unknown	gnl\|CDD\|238571
NZ_CP009863.1\|WP_004900844.1\|4661767_4662913_-\|glycerate-2-kinase	unknown	unknown	gnl\|CDD\|182392
NZ_CP009863.1\|WP_004149915.1\|4671949_4673362_+\|PTS-transporter-subunit-EIIC	unknown	unknown	gnl\|CDD\|224218
NZ_CP009863.1\|WP_038435713.1\|4658858_4659560_+\|pirin-family-protein	unknown	unknown	gnl\|CDD\|224655
NZ_CP009863.1\|WP_002917970.1\|4671024_4671939_+\|1-phosphofructokinase	unknown	unknown	gnl\|CDD\|274804
NZ_CP009863.1\|WP_004149907.1\|4659825_4660236_-\|Spy/CpxP-family-protein-refolding-chaperone	unknown	unknown	gnl\|CDD\|226203
NZ_CP009863.1\|WP_002917920.1\|4655861_4656254_+\|DoxX-family-protein	unknown	unknown	gnl\|CDD\|225168
NZ_CP009863.1\|WP_004144865.1\|4657857_4658754_-\|LysR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|176122
NZ_CP009863.1\|WP_004218217.1\|4668991_4669795_-\|DeoR/GlpR-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224268
NZ_CP009863.1\|WP_002917918.1\|4655219_4655516_+\|YqjK-like-family-protein	unknown	unknown	gnl\|CDD\|372871
NZ_CP009863.1\|WP_002917926.1\|4659584_4659752_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009863.1\|WP_004149911.1\|4664691_4666023_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|273326
NZ_CP009863.1\|WP_002917917.1\|4654824_4655223_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|227681
NZ_CP009863.1\|WP_002917923.1\|4657447_4657816_+\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|225694
NZ_CP009863.1\|WP_002917922.1\|4656334_4657321_+\|glutathione-S-transferase-family-protein	unknown	unknown	gnl\|CDD\|223512
NZ_CP009863.1\|WP_002917954.1\|4663894_4664665_-\|2-dehydro-3-deoxyglucarate-aldolase	unknown	unknown	gnl\|CDD\|182547
NZ_CP009863.1\|WP_002917968.1\|4670145_4671000_+\|tagatose-bisphosphate-family-class-II-aldolase	unknown	unknown	gnl\|CDD\|183710
NZ_CP009863.1\|WP_004150939.1\|4660543_4661008_+\|OB-fold-putative-lipoprotein	unknown	unknown	gnl\|CDD\|378982
NZ_CP009863.1\|WP_002917952.1\|4662977_4663868_-\|2-hydroxy-3-oxopropionate-reductase	unknown	unknown	gnl\|CDD\|183197

Protein	Function_ID	Function_description	E-value
NZ_CP009863.1\|WP_002917960.1\|4666415_4667987_+\|galactarate-dehydratase	gnl\|CDD\|274491	TIGR03248, galactar-dH20, galactarate dehydratase. Galactarate dehydratase converts D-galactarate to 5-dehydro-4-deoxyglucarate which is subsequently acted on by GarL, tartronate semialdehyde reductase and glycerate kinase (GenProp0714).	0
NZ_CP009863.1\|WP_002917963.1\|4668041_4668992_-\|sugar-kinase	gnl\|CDD\|238571	cd01166, KdgK, 2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.	8.58747e-96
NZ_CP009863.1\|WP_004900844.1\|4661767_4662913_-\|glycerate-2-kinase	gnl\|CDD\|182392	PRK10342, PRK10342, glycerate kinase I; Provisional.	0
NZ_CP009863.1\|WP_004149915.1\|4671949_4673362_+\|PTS-transporter-subunit-EIIC	gnl\|CDD\|224218	COG1299, FruA, Phosphotransferase system, fructose-specific IIC component [Carbohydrate transport and metabolism].	1.28985e-124
NZ_CP009863.1\|WP_038435713.1\|4658858_4659560_+\|pirin-family-protein	gnl\|CDD\|224655	COG1741, COG1741, Pirin-related protein [General function prediction only].	2.63232e-63
NZ_CP009863.1\|WP_002917970.1\|4671024_4671939_+\|1-phosphofructokinase	gnl\|CDD\|274804	TIGR03828, pfkB, 1-phosphofructokinase. This enzyme acts in concert with the fructose-specific phosphotransferase system (PTS) which imports fructose as fructose-1-phosphate. The action of 1-phosphofructokinase results in beta-D-fructose-1,6-bisphosphate and is an entry point into glycolysis (GenProp0688).	1.43672e-115
NZ_CP009863.1\|WP_004149907.1\|4659825_4660236_-\|Spy/CpxP-family-protein-refolding-chaperone	gnl\|CDD\|226203	COG3678, CpxP, P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein [Intracellular trafficking and secretion / Cell motility and secretio / Signal transduction mechanisms / Inorganic ion transport and metabolism].	8.17264e-19
NZ_CP009863.1\|WP_002917920.1\|4655861_4656254_+\|DoxX-family-protein	gnl\|CDD\|225168	COG2259, COG2259, Predicted membrane protein [Function unknown].	2.0965e-24
NZ_CP009863.1\|WP_004144865.1\|4657857_4658754_-\|LysR-family-transcriptional-regulator	gnl\|CDD\|176122	cd08431, PBP2_HupR, The C-terminal substrate binding domain of LysR-type transcriptional regulator, HupR, which regulates expression of the heme uptake receptor HupA; contains the type 2 periplasmic binding fold. HupR, a member of the LysR family, activates hupA transcription under low-iron conditions in the presence of hemin. The expression of many iron-uptake genes, such as hupA, is regulated at the transcriptional level by iron and an iron-binding repressor protein called Fur (ferric uptake regulation). Under iron-abundant conditions with heme, the active Fur repressor protein represses transcription of the iron-uptake gene hupA, and prevents transcriptional activation via HupR. Under low-iron conditions with heme, the Fur repressor is inactive and transcription of the hupA is allowed. This substrate-binding domain shows significant homology to the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	3.52e-52
NZ_CP009863.1\|WP_004218217.1\|4668991_4669795_-\|DeoR/GlpR-transcriptional-regulator	gnl\|CDD\|224268	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism].	5.91814e-46
NZ_CP009863.1\|WP_002917918.1\|4655219_4655516_+\|YqjK-like-family-protein	gnl\|CDD\|372871	pfam13997, YqjK, YqjK-like protein. The YqjK-like protein family includes the E. coli YqjK protein, which is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 100 amino acids in length. There is a single completely conserved residue R that may be functionally important.	1.48395e-22
NZ_CP009863.1\|WP_004149911.1\|4664691_4666023_-\|MFS-transporter	gnl\|CDD\|273326	TIGR00893, Probable_glucarate_transporter, D-galactonate transporter. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids].	4.0154e-131
NZ_CP009863.1\|WP_002917917.1\|4654824_4655223_+\|phage-holin-family-protein	gnl\|CDD\|227681	COG5393, COG5393, Predicted membrane protein [Function unknown].	1.16468e-44
NZ_CP009863.1\|WP_002917923.1\|4657447_4657816_+\|DUF805-domain-containing-protein	gnl\|CDD\|225694	COG3152, COG3152, Predicted membrane protein [Function unknown].	1.36085e-39
NZ_CP009863.1\|WP_002917922.1\|4656334_4657321_+\|glutathione-S-transferase-family-protein	gnl\|CDD\|223512	COG0435, ECM4, Predicted glutathione S-transferase [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP009863.1\|WP_002917954.1\|4663894_4664665_-\|2-dehydro-3-deoxyglucarate-aldolase	gnl\|CDD\|182547	PRK10558, PRK10558, alpha-dehydro-beta-deoxy-D-glucarate aldolase; Provisional.	0
NZ_CP009863.1\|WP_002917968.1\|4670145_4671000_+\|tagatose-bisphosphate-family-class-II-aldolase	gnl\|CDD\|183710	PRK12737, gatY, tagatose-bisphosphate aldolase subunit GatY.	0
NZ_CP009863.1\|WP_004150939.1\|4660543_4661008_+\|OB-fold-putative-lipoprotein	gnl\|CDD\|378982	pfam12869, tRNA_anti-like, tRNA_anti-like. This is a family of bacterial, archeael and viral proteins that is related to the tRNA_anti family pfam01336. The major characteristic of families like tRNA_anti is their OB-fold, and many of them bind DNA.	3.01553e-44
NZ_CP009863.1\|WP_002917952.1\|4662977_4663868_-\|2-hydroxy-3-oxopropionate-reductase	gnl\|CDD\|183197	PRK11559, garR, tartronate semialdehyde reductase; Provisional.	0

>NZ_CP009863.1|WP_004150939.1|4660543_4661008_+|OB-fold-putative-lipoprotein
MLLRFRVLPLVFVISLLSGCGLASKAFYSAGDKLFQPGDDAVASMQTYSVAQFLQPFTLNPAKASSDYLGKWVKVRGVIVDIRRKSGIAGSYYFIVTMRDEQNKTDKRLTFNFGSHNSADVEALSNGSVATIVGQVHQVQDSTIPTLQNPKVVK
>NZ_CP009863.1|WP_004149907.1|4659825_4660236_-|Spy/CpxP-family-protein-refolding-chaperone
MKLITRIAFATLLTTGFSITAQAADVKAAPAPAQDPIVQHLKLTNDQVAKIKSLHQQLESNVQQISQQEIKDGALINVIDSGKWDEKAVNDQLAAFSKIDQQVRYYRVKYYFEVNKVLTPEQRTQVKKDLADALSE
>NZ_CP009863.1|WP_002917926.1|4659584_4659752_+|hypothetical-protein
MSKKKNRKKASPTPLAPVQPQVAGAASFGYDEMLSELEAIVAEAEIRLRDEESLA
>NZ_CP009863.1|WP_038435713.1|4658858_4659560_+|pirin-family-protein
MITTRTAKQCGQADFGWLQARYTFSFGHYFDPKLLGFASLRVLNQEVLAPGASFQARTYPKVDILNLILEGKAEYRDSDGNHVQAKAGEALLIATQPGVSYSEHNLSKEQSLTRMQLWLDACPQRENPLQQKINVADATLQLLASPEGGDNSLQLRQQAWVYHIAMEKGEQINVQLHGPRAYLQSIHGSVHAVAQEQQKQALTCGDGAFIRDEANITLVADTPLRALLIDLPV
>NZ_CP009863.1|WP_004144865.1|4657857_4658754_-|LysR-family-transcriptional-regulator
MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQKLEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALSRGWETHLTIVTEALVPTPDLFPLIEKLATKSNTQLSIITEVLAGAWERLEQGRADIVVAPDMHFRSSSEINSRKLYSVLSVYVAAPDHPIHQEPEPLSEVTRVKYRGVAVADTARERPVLTVQLLDKQPRLTVSTIEDKRQALLAGLGVATMPYPLVEKDIAEGRLRVVSPEYTNEIDIIMAWRRDSMGEAKSWCLREIPKLFAGR
>NZ_CP009863.1|WP_002917923.1|4657447_4657816_+|DUF805-domain-containing-protein
MDWYLKVLKNYIGFGGRARRKEYWMFILVNLILTGVLSIIDKMLGWQRAGGEGILTTIYGVLVFLPWWAVQFRRLHDTDRSAWWLLLLLIPVIGWLVILIFNCQRGTEGNNRFGPDPKPFSY
>NZ_CP009863.1|WP_002917922.1|4656334_4657321_+|glutathione-S-transferase-family-protein
MGQLVDGVWQDTWYDTKSTGGRFKRSVSAFRNWLTADGAAGPSGEGGFAAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFLPVSVVNPLMLENGWTFDDSFPEATGDTLYQHDFLYQLYLHADPHYTGRVTVPVLWDKKQQTIVSNESAEIIRMFNTAFDGLGARAGDYYPPALREQIDELNGWIYDNVNNGVYKAGFATSQQAYDEAVDAVFTSLERLEQILGQHRYLTGNQLTEADIRLWTTLVRFDPVYVTHFKCDKRRISDYLNLYGFLRDIYQMPGIAETVSFPHIRHHYYRSHKTINPTGIISIGPQQDLNEPHGRDQRFR
>NZ_CP009863.1|WP_002917920.1|4655861_4656254_+|DoxX-family-protein
MKKLEDVGVLVARILMPILFITAGWGKITGYAGTQQYMEAMGVPGALLPLTILLEFGGGLAILFGFLTRTTALFTAGFTLLTAFLFHSNFAEGVNSLMFMKNLTIAGGYLLLAITGPGAFSIDRVLNKKW
>NZ_CP009863.1|WP_002917918.1|4655219_4655516_+|YqjK-like-family-protein
MNGRQERERQKTQLLRQIQQQRLELSACRRHWHEATAPLDRGWHTLLSLRSWLMVGSGLMAVWSVRHPHFLMRWTKRGLGLWSTWRLVRGILRQSAVR
>NZ_CP009863.1|WP_002917917.1|4654824_4655223_+|phage-holin-family-protein
MANTQHTQGPGQRVFSIGQRIVTLLVEMVETRLRLVVVELEEEKANLFQLLIMTGLTLLFAAFGLMSLLVLVIWAVDAQYRLHVMIATTVVLLLAAAIVGILTLRKARRSTLLRLTRKELENDRALLEEDKS
>NZ_CP009863.1|WP_004900844.1|4661767_4662913_-|glycerate-2-kinase
MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSLPVADGGEGTVEAMIAATQGKEHFAWVTGPLGERVKACWGMSGDGVTAFIEMAAASGLGLVPPDKRNPLITTSRGTGELILQALEHGAERIIIGIGGSATNDGGAGMMQALGARLCDAEGQEIGHGGGSLSRLSRIDLSAIDPRLRDRMIHVACDVTNPLVGERGASRIFGPQKGATEAMIVELDRNLAHYADVIKASLQVDVKSIPGAGAAGGMGAALMAFLNAELRSGIEIVTEALKLEEQIHDCSLVVTGEGRLDSQSVHGKVPVGVARVAKKYRKPVIGIAGSLTHDVGVVHQHGIDAVFSVLTSVSTLEEAFRGAFDNIYRASRNIAATLQVGMTTEG
>NZ_CP009863.1|WP_002917952.1|4662977_4663868_-|2-hydroxy-3-oxopropionate-reductase
MTIKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETATTPKAIAEQCEVIITMLPNSPHVKEVALGENGIIEGAKPGTVVIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEKLAKVEVTR
>NZ_CP009863.1|WP_002917954.1|4663894_4664665_-|2-dehydro-3-deoxyglucarate-aldolase
MDNAIFPNKFKAALAAHQVQIGCWCALANPISTEVLGLAGFDWLVLDAEHAPNDVTTLIPQLMALKGSSSAQVVRVPTNEPIIIKRMLDIGFYNFLVPFVETAEQAAQAVASTRYPPEGIRGVSVSHRGNMFGTVPDYFAQSNKNISILVQIESQTGVDNVEAIAATEGVDGVFVGPSDLAAALGHLGNAAHPEVQRAIQHIFASAKKHGKPSGILAPVEADARRYLEWGATFVAVGSDLGVFRSATQKLADAFKK
>NZ_CP009863.1|WP_004149911.1|4664691_4666023_-|MFS-transporter
MILDSTLDEKKGIPTRYLILLMIFVVTAVNYGDRATLSIAGTEVAKELGLSAVSMGYIFSAFGWAYLLMQIPGGWLLDKFGSKKVYSYSLFFWSLFTFLQGFIDVFPLAWAGVSMFFMRFMLGFSEAPSFPANARIVAAWFPAKERGTASAIFNAAQYFSLALFSPLLGWLTFALGWEHVFTVMGIIGFVLTIIWVKFVHNPTDHPRMSAAELKYISEGGAVVDMDHKKEATPAAGPKMDYIRQLLTNRMMLGVFFGQYFLNTITWFFLTWFPIYLVQDKGMSILKVGFVASIPALFGFAGGVLGGLFSDYLIGRGCTLTFARKLPIVLGMLLASSIILCNYTASTPLVITLMALAFFGKGFGALGWPVISDVAPKEIVGLCGGVFNVFGNVASIATPLVIGYIVSELHSFNGALIFVGGSALMMMVCYLFVVGDIKRMELQK
>NZ_CP009863.1|WP_002917960.1|4666415_4667987_+|galactarate-dehydratase
MADIAIRQQSPTAFYIKVDPTDNVAIIVNDRGLTAGTRFPDGLTLVEHIPQGHKVALVDIPAHGEIIRYGEVIGYAVRDIPQGSWIDESLVELPTAPPLNTLPLATKVPEPLPPLEGYTFEGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPNYPNVDGVVGLNHLYGCGVAINAPAAVVPIRTIHNIALNPNFGGEVMVIGLGCEKLQPERLLQGTEDVKSIPVDSASIVSLQDEKHVGFKSMVDDILQVAERHLAKLNQRQRETCPASELVVGMQCGGSDAFSGVTANPAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINEEVGKRLLEEMAWYDNYLDMGKTDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDFVCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWYDLMDINAGTIATGEETIEDVGRKLFEFILDVASGRKKTFSDQWGLHNQLAVFNPAPVT
>NZ_CP009863.1|WP_002917963.1|4668041_4668992_-|sugar-kinase
MNVTICTIGELLVEFLAKEENQGFSRPGEFWGPYPSGAPAIFADQVAKLGFGSVLFSCVGNDAFGEMNIARLEKDGVNVNGIAMLQKATTGSAFVSYRSQAQRDFIFNMPNSACGLLTADHIDEALLNQCQHFHIMGSSLFSFRIIDAMRKAIENIKGRSGTVSFDPNIRKEMLNIPEMSQAFEYILDYTDIFLPSDGELDYFGLNPERNEQVLVDKLLKRGVKHVVIKRGPRGASYFSANETHHVAGFSVPVVDPTGAGDCFGATFVSLFLNGATPREALRWANASGSLAISQRGPMEGTSTQAEISAFLAAQHP
>NZ_CP009863.1|WP_004218217.1|4668991_4669795_-|DeoR/GlpR-transcriptional-regulator
MDIAEIVRKNGEIKVDDLAEMLAVSGVTIRNDLNYLEQQGYLKRSFGGAIYTAQAGAPVAMTREAPAVRDKALETEMARQVAAQIENGETLFLGQGSILRKVIPFLANREELCLLLNDLGHVALAQEFLNGETVLLGGVLSGQGRIVEGELALKALGHYRPSRALIAVDHIAEDGTLSVRNEVTAHLLSEAVAQSKRVIAIVASRPVYGEKRYAVGELQQISSVVTPQVVAAEYHACFLAAGLTNSYTNNECLTWLNTALHKTNQER
>NZ_CP009863.1|WP_002917968.1|4670145_4671000_+|tagatose-bisphosphate-family-class-II-aldolase
MYIISSKNMLLKAQRQSYAVPAFNIHNLETMQVVVETAAELRSPLILAGTPGTYSYAGTGNVVAIARDLAKKWDLPLALHLDHHEDLADITRKVQAGIRSVMIDGSHSPFEENVALVKSVVELSHRYDASVEAELGRLGGVEDDLVVDAKDALYTNPEQAREFVARTGIDSLAVAIGTAHGLYTAEPKLDFERLAAIRDCVDVPLVLHGASGLPDSDIRRAISLGVCKVNVATELKIAFSDALKAYFLENPGANDPRHYMKPAKAAMKEVVRKVIHVCGCEGQL
>NZ_CP009863.1|WP_002917970.1|4671024_4671939_+|1-phosphofructokinase
MIHTLTLNTAIDMNIFCDPLQPAAVNRTRQTEYCPNGKGVNVSLVLHHYQQPTHVMGIFGGFTGRYIVEELRKQHINVTPAWVAEPTRINIFINDGSDEYKLVNPGARIDDEGKEQILHHLQCVAPGDYLVISGSLPPGIESRFYSEILVLCQQKGCEVILDISHPVLRQLLEWRPLLIKPNDDELKEIFGLDVSSPRRVREAMQTLHQLGARNVLLTLGAQGLYFSNGAQLWFCSAPKIELVSSACAGDAALGAFLSHWLNTDDIPQALALASATGADVAASAGLGKLNRTQELLQQLQIVQL
>NZ_CP009863.1|WP_004149915.1|4671949_4673362_+|PTS-transporter-subunit-EIIC
MKKIIAVTGCPTGIAHTFMAEEALKTAAKKLNVEIKVETNGASGVENAITPEDLKDIYGVIIAADKDVNAERFNGLPVIEVPVKEAIHHPAELINKVVNGQAPRRQGFSAATDPDEKYERESFGRQIYKHLMSGVSNMLPFVVAGGILIAVSFLWGIYSADPNSPQYNVIAATLMKVGQQAFSIMVPVFTAYIAWSISGRPGMVAGFVGGLLANATGAGFLGGIIAGFAAGYFMLLIRHLLDGLPRQYEGLKSIFIMPLIGVLVIGVMMVLLGQPVAAINNGMMNWLSSLQEANPILLGIVVGAMCSFDFGGPVNKAAYVTGTLLLGQGNYFFMAGVSAACITPPLVIALATTFFPKGFSEEERAAGMVNYILGCTHITEGAIPFAAKDPLRVIPMMMIASSISAVLSYSLHIQVPAPHGGFLILPLVSKPLMWVLCILAGSACGALMLGCWRLWQKRTDKATALAGAMK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1310855 : 1354666

Salmonella_phage(37.78%)

terminase,holin,plate,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004143010.1\|1310855_1312241_+\|tRNA	cysteine--tRNA ligase	M1PG92	Moumouvirus	3.5e-46	35.4
WP_004143016.1\|1312286_1312499_-	ribosome-associated protein YbcJ	NA	NA	NA	NA
WP_004143017.1\|1312500_1313367_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD	A0A249XZQ2	Enterococcus_phage	1.3e-30	34.8
WP_071531921.1\|1314838_1315174_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_038435183.1\|1315175_1315394_-	TraR/DksA family transcriptional regulator	A0A0K2FI84	Escherichia_phage	9.9e-12	50.7
WP_038435184.1\|1315390_1316185_-	phage-like protein	A0A077KCB2	Edwardsiella_phage	6.9e-79	54.2
WP_023312753.1\|1316181_1316406_-	hypothetical protein	A0A286S2B3	Klebsiella_phage	1.5e-18	60.8
WP_023312754.1\|1316931_1317225_-	host cell division inhibitory peptide Kil	NA	NA	NA	NA
WP_071844745.1\|1317698_1317893_+	hypothetical protein	NA	NA	NA	NA
WP_023158874.1\|1317858_1318077_-	hypothetical protein	NA	NA	NA	NA
WP_038435185.1\|1318280_1318766_-	helix-turn-helix domain-containing protein	A0A0R6PH50	Moraxella_phage	6.4e-11	45.6
WP_023297269.1\|1318837_1319107_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_032413998.1\|1319106_1319520_+	hypothetical protein	A0A0U2RXZ9	Escherichia_phage	7.6e-45	70.5
WP_038435187.1\|1319785_1320880_+	hypothetical protein	K7PLZ7	Enterobacterial_phage	2.5e-31	42.3
WP_038435188.1\|1320906_1321227_+	hypothetical protein	NA	NA	NA	NA
WP_023158880.1\|1321300_1321522_+	hypothetical protein	NA	NA	NA	NA
WP_029499288.1\|1321514_1322306_+	hypothetical protein	A4JX52	Burkholderia_virus	2.8e-64	52.1
WP_052191534.1\|1322298_1322865_+	hypothetical protein	K7PJQ4	Enterobacteria_phage	2.6e-48	78.2
WP_038435189.1\|1322864_1323245_+	HNH endonuclease	K7P7B7	Enterobacteria_phage	3.0e-64	95.8
WP_032454813.1\|1324283_1324553_+	hypothetical protein	H6WRY4	Salmonella_phage	4.6e-35	80.7
WP_162921945.1\|1325104_1325272_+	hypothetical protein	NA	NA	NA	NA
WP_025713730.1\|1325417_1325726_+	DUF968 domain-containing protein	I6XGC2	Burkholderia_virus	7.1e-24	56.8
WP_077255790.1\|1325718_1326378_+	phage N-6-adenine-methyltransferase	Q8HA94	Salmonella_phage	4.1e-101	79.5
WP_038435191.1\|1326374_1326953_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	1.2e-48	56.1
WP_038435192.1\|1327404_1327674_+\|holin	holin	K7P6H9	Enterobacteria_phage	1.1e-31	77.2
WP_038435736.1\|1327651_1328149_+	lysozyme	A0A0M3ULD1	Salmonella_phage	5.3e-77	83.6
WP_038435193.1\|1328145_1328496_+	hypothetical protein	A0A0K2FIW3	Enterobacter_phage	3.8e-13	41.5
WP_023283349.1\|1328934_1329204_-	hypothetical protein	NA	NA	NA	NA
WP_004218030.1\|1329666_1330155_+	hypothetical protein	NA	NA	NA	NA
WP_038435194.1\|1330105_1331506_+\|terminase	PBSX family phage terminase large subunit	A0A077KAW0	Edwardsiella_phage	2.1e-187	69.2
WP_038435195.1\|1331743_1333195_+	DUF1073 domain-containing protein	A0A0M4S6U1	Salmonella_phage	1.2e-190	68.4
WP_038435196.1\|1333250_1333799_+	phage Mu F like family protein	A0A0M4REK0	Salmonella_phage	8.2e-47	56.3
WP_038435197.1\|1333850_1335053_+	DUF2213 domain-containing protein	A0A0M4R5A6	Salmonella_phage	3.9e-110	53.7
WP_038435198.1\|1335056_1335551_+	hypothetical protein	A0A2H4JHM9	uncultured_Caudovirales_phage	9.3e-50	62.7
WP_038435199.1\|1335562_1336504_+	DUF2184 domain-containing protein	A0A2H4J191	uncultured_Caudovirales_phage	1.3e-137	77.4
WP_021441342.1\|1336543_1336825_+	hypothetical protein	NA	NA	NA	NA
WP_038435200.1\|1336793_1337213_+	DUF4054 domain-containing protein	A0A0M5M3S2	Salmonella_phage	2.0e-40	61.5
WP_038435201.1\|1337209_1337716_+	hypothetical protein	NA	NA	NA	NA
WP_020804053.1\|1337715_1338120_+	hypothetical protein	A0A2H4J1A4	uncultured_Caudovirales_phage	1.1e-43	71.5
WP_025269951.1\|1338112_1338664_+	hypothetical protein	A0A2H4J1A0	uncultured_Caudovirales_phage	1.5e-40	44.9
WP_025269950.1\|1338665_1339817_+	DUF3383 family protein	A0A0M4RD26	Salmonella_phage	2.1e-177	81.5
WP_025269949.1\|1339827_1340268_+	DUF3277 family protein	A0A0M5M1K6	Salmonella_phage	2.1e-61	79.5
WP_000393949.1\|1340271_1340721_+	hypothetical protein	A0A0M4S6U8	Salmonella_phage	1.1e-36	55.3
WP_016244729.1\|1340762_1340915_+	hypothetical protein	A0A2H4J1A2	uncultured_Caudovirales_phage	1.4e-17	84.0
WP_038435202.1\|1340904_1342827_+	bacteriophage protein	A0A0M4REK7	Salmonella_phage	6.2e-190	56.1
WP_038435203.1\|1342826_1343402_+	hypothetical protein	A0A0M3ULD5	Salmonella_phage	2.9e-63	66.5
WP_025269944.1\|1343477_1343705_+	hypothetical protein	A0A2H4J495	uncultured_Caudovirales_phage	5.6e-18	52.0
WP_038435204.1\|1343707_1344772_+	hypothetical protein	A0A0M4QX01	Salmonella_phage	9.8e-137	68.6
WP_038435205.1\|1344774_1345125_+	hypothetical protein	A0A0M4RTY3	Salmonella_phage	2.1e-27	82.2
WP_141770821.1\|1345127_1345574_+	hypothetical protein	NA	NA	NA	NA
WP_038435207.1\|1345636_1346293_+	hypothetical protein	A0A0M5M1K7	Salmonella_phage	2.5e-74	58.3
WP_004152573.1\|1346294_1346648_+	hypothetical protein	A0A2H4J629	uncultured_Caudovirales_phage	2.3e-50	80.3
WP_038435208.1\|1346647_1347847_+\|plate	baseplate J/gp47 family protein	A0A0M4RD32	Salmonella_phage	1.4e-160	75.1
WP_038435209.1\|1347843_1348617_+	DUF2612 domain-containing protein	A0A0M5M1K4	Salmonella_phage	3.1e-68	50.6
WP_038435210.1\|1348616_1349390_+	hypothetical protein	A0A248SL44	Klebsiella_phage	3.0e-26	49.7
WP_052191535.1\|1349411_1351496_+	CotH kinase family protein	A0A286S1P0	Klebsiella_phage	3.2e-22	52.5
WP_052191536.1\|1351508_1352588_+	hypothetical protein	A0A248XD67	Klebsiella_phage	8.0e-62	41.7
WP_179132354.1\|1352736_1353084_+	hypothetical protein	A0A286S1P3	Klebsiella_phage	2.7e-11	74.4
WP_038435212.1\|1354348_1354666_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.3e-20	48.0

DBSCAN-SWA_2

1834303 : 1843777

Dickeya_phage(16.67%)

tRNA,protease

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002896440.1\|1834303_1835419_+	macrolide transporter subunit MacA	A0A140XAI1	Dickeya_phage	1.3e-06	52.7
WP_004150848.1\|1835415_1837356_+	macrolide ABC transporter ATP-binding protein/permease MacB	G9BWD6	Planktothrix_phage	1.9e-37	40.5
WP_002896516.1\|1837432_1837654_-	cold shock-like protein CspD	A0A2H4N7Y6	Lake_Baikal_phage	1.3e-16	61.2
WP_002896520.1\|1837979_1838297_+\|protease	ATP-dependent Clp protease adapter ClpS	A0A1B1IT64	uncultured_Mediterranean_phage	2.0e-13	45.7
WP_002896522.1\|1838327_1840607_+\|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	A0A223W0B1	Agrobacterium_phage	1.6e-165	42.0
WP_001040187.1\|1840737_1840956_-	translation initiation factor IF-1	NA	NA	NA	NA
WP_002898014.1\|1841309_1842011_-\|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	NA	NA	NA	NA
WP_032421153.1\|1842055_1843777_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	W8CYL7	Bacillus_phage	1.2e-14	22.6

DBSCAN-SWA_3

2080212 : 2156018

Klebsiella_phage(25.49%)

head,protease,portal,terminase,transposase,capsid,integrase,holin,tRNA,tail

attL 2076915:2076929|attR 2100243:2100257

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2076915:2076929	attL	NA	NA	NA	NA
WP_004150803.1\|2080212_2081319_-\|tRNA	tRNA 2-thiouridine(34) synthase MnmA	NA	NA	NA	NA
WP_004150802.1\|2081375_2081834_-	NUDIX hydrolase	NA	NA	NA	NA
WP_004150801.1\|2081850_2082501_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA
WP_004150800.1\|2082741_2083992_+	NADP-dependent isocitrate dehydrogenase	Q77Z09	Phage_21	1.1e-19	92.6
WP_000741346.1\|2084105_2085248_-\|integrase	phage integrase Arm DNA-binding domain-containing protein	Q77Z02	Phage_21	9.1e-173	82.2
WP_000089156.1\|2085237_2085474_-	excisionase	NA	NA	NA	NA
WP_038435237.1\|2085774_2085993_-	hypothetical protein	G8C7S3	Escherichia_phage	3.0e-08	51.7
WP_052191537.1\|2085985_2086630_-	hypothetical protein	A0A248SKW5	Klebsiella_phage	7.5e-15	39.4
WP_023339691.1\|2086634_2086823_-	hypothetical protein	A0A192Y8X2	Salmonella_phage	3.7e-23	88.7
WP_038435238.1\|2087271_2087469_-	hypothetical protein	NA	NA	NA	NA
WP_038435239.1\|2088263_2089049_-	hypothetical protein	C7BGF1	Burkholderia_phage	7.1e-60	51.4
WP_038435240.1\|2089048_2089348_-	hypothetical protein	NA	NA	NA	NA
WP_179132365.1\|2089735_2089906_-	hypothetical protein	NA	NA	NA	NA
WP_023317570.1\|2090337_2091033_-	helix-turn-helix transcriptional regulator	Q8HAA0	Salmonella_phage	3.5e-87	71.3
WP_001191665.1\|2091130_2091373_+	helix-turn-helix transcriptional regulator	A0A1C9IHV8	Salmonella_phage	1.3e-25	80.3
WP_000230161.1\|2091407_2091869_+	hypothetical protein	K7PJS5	Enterobacterial_phage	3.8e-69	87.5
WP_023317571.1\|2092106_2092319_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.2e-16	72.7
WP_038435241.1\|2092275_2093190_+	conserved phage C-terminal domain-containing protein	H2DE83	Erwinia_phage	3.1e-30	56.3
WP_038435242.1\|2093186_2093996_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	5.9e-110	69.3
WP_004184734.1\|2094005_2094383_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	5.1e-48	73.6
WP_032437712.1\|2094395_2095376_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.9e-134	66.9
WP_038435243.1\|2095389_2095968_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	3.8e-50	56.7
WP_004206702.1\|2096315_2096726_+	hypothetical protein	NA	NA	NA	NA
WP_004206701.1\|2096722_2097295_+	hypothetical protein	NA	NA	NA	NA
WP_057182115.1\|2097478_2097778_+\|holin	phage holin family protein	A0A286N2Q5	Klebsiella_phage	1.5e-39	84.8
WP_032418741.1\|2097774_2098314_+	glycoside hydrolase family 108 protein	A0A286N2Q6	Klebsiella_phage	2.0e-101	98.9
WP_004190674.1\|2098310_2098655_+	hypothetical protein	A0A286N2Q7	Klebsiella_phage	2.0e-38	80.7
WP_004190672.1\|2098651_2098927_+	hypothetical protein	A0A286N2Q8	Klebsiella_phage	2.2e-08	72.5
WP_004177174.1\|2099162_2099447_-	hypothetical protein	NA	NA	NA	NA
WP_029497197.1\|2099579_2099852_+	hypothetical protein	NA	NA	NA	NA
WP_038435244.1\|2100176_2100422_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	1.6e-18	63.0
2100243:2100257	attR	NA	NA	NA	NA
WP_038435245.1\|2100544_2101300_+	serine/threonine protein kinase	I6PD73	Cronobacter_phage	3.6e-61	47.8
WP_038435246.1\|2101296_2102037_+	serine/threonine-protein phosphatase	I6PCV8	Cronobacter_phage	1.3e-58	47.1
WP_038435248.1\|2102422_2102659_+	hypothetical protein	NA	NA	NA	NA
WP_038435249.1\|2102668_2103010_+	HNH endonuclease	K7P7P4	Enterobacteria_phage	2.7e-48	74.8
WP_023342855.1\|2103193_2103658_+\|terminase	phage terminase small subunit P27 family	Q9B019	Phage_GMSE-1	1.7e-48	61.4
WP_029603006.1\|2103611_2105354_+\|terminase	terminase large subunit	A0A0U2C138	Paracoccus_phage	2.8e-141	46.2
WP_029603007.1\|2105353_2106661_+\|portal	phage portal protein	K7PJU5	Enterobacteria_phage	9.3e-214	85.1
WP_029603008.1\|2106673_2107522_+\|protease	Clp protease ClpP	K7PH05	Enterobacteria_phage	1.0e-128	84.6
WP_004177151.1\|2107531_2108749_+\|capsid	phage major capsid protein	K7PM57	Enterobacteria_phage	1.6e-196	88.1
WP_023342850.1\|2108791_2109034_+	hypothetical protein	A0A1P8DTJ1	Proteus_phage	1.6e-10	68.1
WP_004177149.1\|2109033_2109360_+\|head,tail	phage gp6-like head-tail connector protein	K7PKT4	Enterobacteria_phage	6.2e-42	69.4
WP_038435250.1\|2109371_2109710_+\|head	phage head closure protein	A0A2H4JHK5	uncultured_Caudovirales_phage	9.2e-41	73.2
WP_004177147.1\|2109706_2110156_+	HK97 gp10 family phage protein	Q9MCS9	Enterobacteria_phage	3.9e-63	83.2
WP_004177145.1\|2110152_2110500_+	DUF3168 domain-containing protein	K7PKL6	Enterobacterial_phage	8.9e-31	60.2
WP_004177142.1\|2110556_2111261_+	immunoglobulin domain-containing protein	K7PHL2	Enterobacterial_phage	1.5e-80	66.9
WP_038435251.1\|2111291_2111696_+\|tail	phage tail protein	Q9MCS5	Enterobacteria_phage	7.4e-29	53.1
WP_032409576.1\|2111707_2112004_+	DUF4035 domain-containing protein	Q9MCS5	Enterobacteria_phage	2.5e-26	63.9
WP_004177136.1\|2112078_2112600_+	hypothetical protein	A0A0P0IYG9	Acinetobacter_phage	1.7e-09	45.2
WP_075212289.1\|2112688_2113657_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	6.5e-180	96.3
WP_029603012.1\|2113728_2117307_+\|tail	phage tail tape measure protein	A0A2H4JHR1	uncultured_Caudovirales_phage	8.7e-246	62.6
WP_004177132.1\|2117328_2117802_+	hypothetical protein	A0A286S298	Klebsiella_phage	1.4e-55	62.1
WP_004177130.1\|2117788_2118265_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	4.8e-51	65.8
WP_004177128.1\|2118277_2118658_+	nitrite transporter	A0A286S2A6	Klebsiella_phage	1.6e-57	80.2
WP_038435252.1\|2118654_2121732_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	62.1
WP_187524103.1\|2121643_2123872_+	CotH kinase family protein	A0A286S1P0	Klebsiella_phage	2.0e-38	72.4
WP_052191540.1\|2123884_2124964_+	hypothetical protein	A0A248XD67	Klebsiella_phage	2.1e-62	41.8
WP_179132354.1\|2125112_2125460_+	hypothetical protein	A0A286S1P3	Klebsiella_phage	2.7e-11	74.4
WP_038435253.1\|2126689_2127061_+	hypothetical protein	K7PGV5	Enterobacterial_phage	1.0e-24	49.1
WP_004892953.1\|2127239_2127392_+	isocitrate dehydrogenase	Q77Z09	Phage_21	3.8e-18	92.0
WP_023279886.1\|2127664_2128378_-	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_038435254.1\|2128374_2128767_-	amino acid-binding protein	NA	NA	NA	NA
WP_004150797.1\|2128759_2129083_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_004140530.1\|2129530_2129758_-	DUF1272 domain-containing protein	NA	NA	NA	NA
WP_004140529.1\|2129870_2131064_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA
WP_032421220.1\|2131131_2131467_-	hypothetical protein	NA	NA	NA	NA
WP_004150795.1\|2131686_2131872_+	general stress protein	NA	NA	NA	NA
WP_004148027.1\|2131962_2132457_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004190904.1\|2132483_2132990_+	ferritin-like domain-containing protein	NA	NA	NA	NA
WP_004179357.1\|2133006_2133894_+	manganese catalase family protein	NA	NA	NA	NA
WP_004140511.1\|2133949_2135356_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA
WP_004140509.1\|2135352_2136363_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA
WP_004140506.1\|2136447_2136645_-	hypothetical protein	NA	NA	NA	NA
WP_004150791.1\|2137211_2137844_+	DNA-binding protein	NA	NA	NA	NA
WP_004150790.1\|2138459_2139146_+	EAL domain-containing protein	NA	NA	NA	NA
WP_032410895.1\|2139258_2139423_-	hypothetical protein	NA	NA	NA	NA
WP_038435255.1\|2139456_2140965_-	UbiD family decarboxylase	NA	NA	NA	NA
WP_004150788.1\|2141085_2141976_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_038435256.1\|2141982_2143767_-	diguanylate cyclase	A0A127AWB9	Bacillus_phage	5.8e-17	36.1
WP_004140494.1\|2143840_2145049_-	HD domain-containing protein	NA	NA	NA	NA
WP_004892909.1\|2145351_2146395_+	type II asparaginase	NA	NA	NA	NA
WP_004148038.1\|2147056_2147971_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	A0A1W6JP29	Morganella_phage	1.1e-72	50.4
WP_004150783.1\|2148060_2148699_+	leucine efflux protein LeuE	NA	NA	NA	NA
WP_004140489.1\|2148829_2149093_+	DUF2534 family protein	NA	NA	NA	NA
WP_004140488.1\|2149152_2149278_-	hypothetical protein	NA	NA	NA	NA
WP_004213093.1\|2149395_2149470_-	protein YoaJ	NA	NA	NA	NA
WP_004150782.1\|2149469_2149571_-	YoaK family small membrane protein	NA	NA	NA	NA
WP_004179366.1\|2149628_2150642_-	sensor domain-containing diguanylate cyclase	A0A127AWB9	Bacillus_phage	1.9e-12	29.0
WP_004179368.1\|2150942_2151182_+	DUF333 domain-containing protein	NA	NA	NA	NA
WP_014343000.1\|2151171_2151510_-	DUF488 family protein	NA	NA	NA	NA
WP_004150778.1\|2151514_2152024_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_004140471.1\|2152169_2152862_+	CTP synthase	NA	NA	NA	NA
WP_020324105.1\|2152893_2154069_-	CynX/NimT family MFS transporter	NA	NA	NA	NA
WP_004140469.1\|2154176_2154971_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_002901080.1\|2154954_2155401_-	DUF441 domain-containing protein	NA	NA	NA	NA
WP_032421225.1\|2155517_2156018_-\|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	NA	NA	NA	NA

DBSCAN-SWA_4

2307233 : 2334662

Salmonella_phage(40.0%)

plate,transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_073553528.1\|2307233_2308577_+\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_004176431.1\|2308573_2309263_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_032421272.1\|2309259_2310966_+	OmpA family protein	NA	NA	NA	NA
WP_032421273.1\|2310970_2311462_+	type VI secretion system effector Hcp	NA	NA	NA	NA
WP_032421274.1\|2311726_2314381_+	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	2.2e-97	33.4
WP_165451997.1\|2314382_2316893_+	type VI secretion system tip protein VgrG	A0A2H4JCD4	uncultured_Caudovirales_phage	3.0e-19	32.6
WP_004179554.1\|2316885_2318118_+	hypothetical protein	NA	NA	NA	NA
WP_071527865.1\|2318124_2318487_+	hypothetical protein	NA	NA	NA	NA
WP_077255787.1\|2319173_2320142_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	8.7e-185	98.4
WP_077255791.1\|2320143_2321139_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	9.0e-185	98.4
WP_087830521.1\|2321424_2322522_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	7.4e-47	41.0
WP_021469292.1\|2323410_2323632_+	hypothetical protein	NA	NA	NA	NA
WP_023282457.1\|2323971_2325180_+	hypothetical protein	NA	NA	NA	NA
WP_077254212.1\|2325176_2328635_+	type VI secretion protein VasK	NA	NA	NA	NA
WP_032421278.1\|2328631_2330230_+	type VI secretion system protein TssA	NA	NA	NA	NA
WP_004190508.1\|2331311_2331782_+	hypothetical protein	NA	NA	NA	NA
WP_032421279.1\|2331858_2333613_+\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_004176418.1\|2333576_2334662_+\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA

DBSCAN-SWA_5

2461733 : 2539793

Klebsiella_phage(34.04%)

head,portal,terminase,capsid,integrase,holin,protease,tail

attL 2452247:2452263|attR 2513491:2513507

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2452247:2452263	attL	NA	NA	NA	NA
WP_004224598.1\|2461733_2462249_-	methylated-DNA--[protein]-cysteine S-methyltransferase	M1PFU9	Streptococcus_phage	4.6e-23	53.5
WP_002903398.1\|2462541_2462700_+	hypothetical protein	NA	NA	NA	NA
WP_017880203.1\|2463307_2463571_-	pyocin activator PrtN family protein	A0A1L5C290	Pseudoalteromonas_phage	7.7e-11	44.1
WP_017880204.1\|2463578_2464142_-	3'-5' exoribonuclease	A0A192Y6E0	Salmonella_phage	1.5e-67	64.1
WP_038435272.1\|2464143_2464872_-	DUF550 domain-containing protein	S4TSR6	Salmonella_phage	7.3e-35	61.9
WP_038435273.1\|2465336_2466122_-	hypothetical protein	A4JX52	Burkholderia_virus	2.6e-62	50.6
WP_038435274.1\|2466121_2466421_-	hypothetical protein	K7PJS4	Enterobacterial_phage	2.7e-12	47.9
WP_019705289.1\|2466809_2467454_-	helix-turn-helix domain-containing protein	A0A1I9KG86	Aeromonas_phage	8.2e-38	40.7
WP_024176406.1\|2467548_2467758_+	cell division protein	NA	NA	NA	NA
WP_021313640.1\|2467783_2468245_+	hypothetical protein	K7PJS5	Enterobacterial_phage	4.9e-69	87.5
WP_071888936.1\|2468482_2468662_+	DUF4222 domain-containing protein	S5M7S5	Escherichia_phage	2.7e-15	73.1
WP_038435276.1\|2468651_2469605_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	2.3e-89	68.7
WP_038435277.1\|2469601_2470411_+	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A1C9II58	Salmonella_phage	4.2e-108	68.2
WP_032412833.1\|2470420_2470798_+	RusA family crossover junction endodeoxyribonuclease	A0A1C9IIA0	Salmonella_phage	2.3e-48	73.6
WP_038435278.1\|2470810_2471791_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	7.1e-134	66.9
WP_038435279.1\|2471804_2472383_+	DUF1133 family protein	A0A0U2S606	Escherichia_phage	2.2e-50	56.7
WP_187524105.1\|2472940_2473786_+	hypothetical protein	A0A1B2IGT1	Erwinia_phage	1.1e-109	73.1
WP_038435280.1\|2473788_2473938_+	hypothetical protein	NA	NA	NA	NA
WP_048334541.1\|2473975_2474095_-	small membrane protein	NA	NA	NA	NA
WP_017145563.1\|2474769_2475165_+\|holin	phage holin family protein	K7PHB9	Enterobacterial_phage	2.6e-63	98.5
WP_019705280.1\|2475151_2475433_+\|holin	phage holin family protein	K7PKN9	Enterobacterial_phage	3.9e-37	80.6
WP_038435281.1\|2475432_2476062_+	glycoside hydrolase family 19 protein	G8C7W0	Escherichia_phage	3.4e-105	90.4
WP_038435282.1\|2476069_2476345_+	hypothetical protein	G8C7W1	Escherichia_phage	3.5e-06	37.1
WP_038435284.1\|2477302_2477548_+	DUF2560 family protein	A0A286N2R1	Klebsiella_phage	3.6e-18	65.4
WP_038435285.1\|2477609_2477960_+	HNH endonuclease	A0A1B5FP94	Escherichia_phage	1.2e-51	80.9
WP_004884285.1\|2478094_2478589_+\|terminase	phage terminase small subunit P27 family	Q8HAD7	Salmonella_phage	1.2e-81	92.0
WP_004899643.1\|2478585_2480316_+\|terminase	terminase large subunit	Q8HAD6	Salmonella_phage	4.6e-301	83.2
WP_038435286.1\|2480510_2481740_+\|portal	phage portal protein	U5P411	Shigella_phage	7.7e-202	81.7
WP_004884313.1\|2481726_2482380_+\|head,protease	HK97 family phage prohead protease	Q8W628	Enterobacteria_phage	2.1e-105	87.4
WP_021313628.1\|2482394_2483603_+\|capsid	phage major capsid protein	A0A192Y5T6	Salmonella_phage	9.9e-194	84.5
WP_023302596.1\|2483641_2483845_+	hypothetical protein	M1FN89	Enterobacteria_phage	2.3e-07	42.4
WP_038435287.1\|2483841_2484162_+\|head,tail	phage gp6-like head-tail connector protein	Q8SBH7	Shigella_phage	5.3e-14	42.2
WP_004216816.1\|2484231_2484429_+	hypothetical protein	A0A286S2A5	Klebsiella_phage	6.4e-26	98.5
WP_038435288.1\|2484430_2484763_+\|head	phage head closure protein	A0A286S2A2	Klebsiella_phage	1.0e-55	98.2
WP_032437723.1\|2484755_2485295_+	HK97 gp10 family phage protein	A0A286S249	Klebsiella_phage	3.7e-92	95.5
WP_038435289.1\|2485291_2485657_+	DUF3168 domain-containing protein	A0A286S1R1	Klebsiella_phage	2.5e-60	91.7
WP_032432336.1\|2485714_2486206_+\|tail	phage major tail protein	A0A286S1Q8	Klebsiella_phage	5.0e-88	99.4
WP_032440655.1\|2486249_2486603_+\|tail	phage tail assembly chaperone family protein, TAC	A0A286S1N4	Klebsiella_phage	1.4e-60	98.3
WP_038435290.1\|2486635_2486899_+	hypothetical protein	A0A286S1P2	Klebsiella_phage	1.5e-43	97.7
WP_052191542.1\|2486895_2487327_+	hypothetical protein	A0A286S1N7	Klebsiella_phage	4.4e-64	94.3
WP_038435292.1\|2487388_2489824_+\|tail	phage tail tape measure protein	A0A286S1S3	Klebsiella_phage	0.0e+00	92.5
WP_032447774.1\|2489823_2490303_+	hypothetical protein	A0A286S298	Klebsiella_phage	6.6e-93	98.1
WP_023343209.1\|2490289_2490772_+	DUF1833 family protein	A0A286S2B1	Klebsiella_phage	2.5e-84	97.5
WP_017880229.1\|2490781_2491162_+	hypothetical protein	A0A286S2A6	Klebsiella_phage	4.6e-73	100.0
WP_038435293.1\|2491158_2494227_+	kinase	A0A286S259	Klebsiella_phage	0.0e+00	98.0
WP_052191543.1\|2494304_2496368_+	CotH kinase family protein	A0A286S1P0	Klebsiella_phage	1.8e-38	73.3
WP_052191544.1\|2496380_2497460_+	hypothetical protein	A0A248XD67	Klebsiella_phage	1.2e-62	41.8
WP_071888937.1\|2498155_2498578_+	hypothetical protein	K7P834	Enterobacteria_phage	2.1e-26	45.3
WP_038435295.1\|2498970_2500071_-\|integrase	site-specific integrase	A0A1W6JP34	Morganella_phage	1.1e-114	56.5
WP_023313074.1\|2500199_2501318_-	AbgT family transporter	NA	NA	NA	NA
WP_020805029.1\|2501437_2502883_-	amidohydrolase	NA	NA	NA	NA
WP_032414878.1\|2502882_2504193_-	M20 family metallo-hydrolase	NA	NA	NA	NA
WP_032415663.1\|2504359_2505268_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_004143055.1\|2505369_2505933_+	DNA endonuclease SmrA	NA	NA	NA	NA
WP_032419018.1\|2505929_2506736_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_002903522.1\|2506905_2507592_+	3-oxoacid CoA-transferase subunit A	NA	NA	NA	NA
WP_004151559.1\|2507602_2508259_+	CoA transferase subunit B	NA	NA	NA	NA
WP_032421298.1\|2508269_2509472_+	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA
WP_032421299.1\|2509481_2510834_+	3-carboxy-cis,cis-muconate cycloisomerase	NA	NA	NA	NA
WP_032421300.1\|2510823_2511588_+	3-oxoadipate enol-lactonase	NA	NA	NA	NA
WP_004143067.1\|2511580_2511970_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA
WP_015958361.1\|2513029_2514274_-	mechanosensitive ion channel	NA	NA	NA	NA
2513491:2513507	attR	NA	NA	NA	NA
WP_023316278.1\|2514298_2514646_-	hypothetical protein	NA	NA	NA	NA
WP_004152246.1\|2514809_2516462_-	class I fumarate hydratase	NA	NA	NA	NA
WP_004148278.1\|2516516_2518028_-	anion permease	NA	NA	NA	NA
WP_016946652.1\|2518669_2521447_+	flavocytochrome c	A0A2P0ZL82	Lactobacillus_phage	1.2e-66	31.3
WP_016946653.1\|2521514_2522465_+	FAD:protein FMN transferase	NA	NA	NA	NA
WP_004176303.1\|2522445_2523165_-	two-component system response regulator DcuR	NA	NA	NA	NA
WP_009308938.1\|2523161_2524778_-	two-component system sensor histidine kinase DcuS	NA	NA	NA	NA
WP_004176301.1\|2524933_2525290_+	hypothetical protein	NA	NA	NA	NA
WP_004179719.1\|2525453_2526374_+	N-acetylmuramic acid 6-phosphate etherase	NA	NA	NA	NA
WP_004190310.1\|2526638_2528294_+	malate dehydrogenase (quinone)	NA	NA	NA	NA
WP_038435296.1\|2528451_2529378_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_015874762.1\|2529367_2530270_-	malonate decarboxylase subunit epsilon	NA	NA	NA	NA
WP_015958367.1\|2530269_2530887_-	malonate decarboxylase holo-ACP synthase	NA	NA	NA	NA
WP_016946654.1\|2530890_2531850_-	AEC family transporter	A0A0U2C0Y4	Salmonella_phage	2.3e-52	89.5
WP_032421303.1\|2531986_2532787_-	biotin-independent malonate decarboxylase subunit gamma	NA	NA	NA	NA
WP_032421304.1\|2532786_2533620_-	biotin-independent malonate decarboxylase subunit beta	NA	NA	NA	NA
WP_004143106.1\|2533612_2533912_-	malonate decarboxylase acyl carrier protein	NA	NA	NA	NA
WP_004143107.1\|2533929_2534772_-	triphosphoribosyl-dephospho-CoA synthase	NA	NA	NA	NA
WP_021313857.1\|2534771_2536427_-	malonate decarboxylase subunit alpha	NA	NA	NA	NA
WP_002903679.1\|2536651_2537686_-	AI-2E family transporter	NA	NA	NA	NA
WP_002903681.1\|2538128_2538491_+	multidrug efflux SMR transporter subunit KpnE	NA	NA	NA	NA
WP_002903683.1\|2538477_2538807_+	multidrug efflux SMR transporter subunit KpnF	NA	NA	NA	NA
WP_002903685.1\|2538850_2538967_-	hypothetical protein	NA	NA	NA	NA
WP_002903687.1\|2538980_2539793_-\|protease	serine protease	NA	NA	NA	NA

DBSCAN-SWA_6

2576145 : 2587031

Escherichia_phage(87.5%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002210516.1\|2576145_2576766_-	aldolase	A0A077SK32	Escherichia_phage	8.0e-115	100.0
WP_009485280.1\|2576758_2578024_-	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	4.3e-232	98.8
WP_002903955.1\|2578035_2578938_-	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	2.6e-159	99.7
WP_002210513.1\|2579198_2579960_+	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	1.9e-134	100.0
WP_001620095.1\|2579980_2580841_-	class A broad-spectrum beta-lactamase SHV-1	A0A077SL40	Escherichia_phage	4.4e-156	99.7
WP_004176262.1\|2581137_2581398_+	hypothetical protein	A0A077SK33	Escherichia_phage	5.4e-41	98.8
WP_001620097.1\|2581484_2582573_+	AAA family ATPase	A0A077SLJ9	Escherichia_phage	8.0e-211	100.0
WP_032421308.1\|2582603_2583869_-	MFS transporter	NA	NA	NA	NA
WP_038435301.1\|2583923_2587031_-	beta-galactosidase	L0N6M2	Herpes_simplex_virus	0.0e+00	59.6

DBSCAN-SWA_7

3234502 : 3269216

Tupanvirus(25.0%)

plate,transposase,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_002910404.1\|3234502_3235759_-\|tRNA	glutamyl-tRNA reductase	NA	NA	NA	NA
WP_002910405.1\|3236029_3236641_+	lipoprotein localization protein LolB	NA	NA	NA	NA
WP_004898981.1\|3236640_3237489_+	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA
WP_002910407.1\|3237672_3238620_+	ribose-phosphate diphosphokinase	A0A2K9L2G2	Tupanvirus	2.3e-44	37.5
WP_020324125.1\|3238744_3240424_+	C4-dicarboxylic acid transporter DauA	A0A2H4J153	uncultured_Caudovirales_phage	1.0e-23	23.4
WP_004175547.1\|3240424_3241471_-	MerR family transcriptional regulator	NA	NA	NA	NA
WP_002910437.1\|3241692_3241968_-	stress-induced protein YchH	NA	NA	NA	NA
WP_004180389.1\|3242240_3242825_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_002910443.1\|3242942_3244034_+	redox-regulated ATPase YchF	NA	NA	NA	NA
WP_020323957.1\|3244114_3244444_-	DUF1869 domain-containing protein	NA	NA	NA	NA
WP_002910453.1\|3244527_3245442_-	sugar ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_004152260.1\|3245573_3246989_-	type VI secretion system ImpA family N-terminal domain-containing protein	NA	NA	NA	NA
WP_004175538.1\|3247008_3247452_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_020806091.1\|3247454_3247991_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_020806092.1\|3247971_3248988_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_023304842.1\|3249017_3250781_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_038435429.1\|3250914_3254325_-	type VI secretion protein VasK	NA	NA	NA	NA
WP_004180395.1\|3254308_3255466_-	hypothetical protein	NA	NA	NA	NA
WP_004180396.1\|3255469_3255736_-	PAAR domain-containing protein	NA	NA	NA	NA
WP_038435430.1\|3255965_3256292_-	hypothetical protein	NA	NA	NA	NA
WP_020323962.1\|3256480_3256720_-	hypothetical protein	NA	NA	NA	NA
WP_004217423.1\|3257001_3257118_-	hypothetical protein	NA	NA	NA	NA
WP_004180403.1\|3257163_3258054_-	SUMF1/EgtB/PvdO family nonheme iron enzyme	A0A7H6	Microcystis_virus	2.0e-10	30.9
WP_077255787.1\|3259071_3260040_+\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	8.7e-185	98.4
WP_071888940.1\|3260977_3262009_+\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
WP_004180405.1\|3262576_3265063_-	type VI secretion system tip protein VgrG	NA	NA	NA	NA
WP_004180406.1\|3265524_3267222_-	OmpA family protein	NA	NA	NA	NA
WP_038435433.1\|3267225_3267879_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_015874925.1\|3267875_3269216_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA

DBSCAN-SWA_8

3449560 : 3471502

Stenotrophomonas_phage(33.33%)

transposase,integrase

attL 3442535:3442549|attR 3473206:3473220

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3442535:3442549	attL	NA	NA	NA	NA
WP_038435459.1\|3449560_3450829_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	1.3e-74	40.7
WP_038435761.1\|3450978_3451701_-	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA
WP_004899253.1\|3451712_3452609_-	oxidoreductase	NA	NA	NA	NA
WP_004899254.1\|3452685_3453570_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA
WP_004899257.1\|3453569_3454427_+	EamA family transporter	NA	NA	NA	NA
WP_004899261.1\|3454662_3457437_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_020805474.1\|3457864_3458896_-\|transposase	IS630-like element ISSpu2 family transposase	NA	NA	NA	NA
WP_077255797.1\|3459589_3460558_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	4.6e-186	99.4
WP_016530710.1\|3460993_3461800_+	SDR family oxidoreductase	NA	NA	NA	NA
WP_031590183.1\|3463388_3464420_+\|transposase	IS630-like element ISSpu2 family transposase	NA	NA	NA	NA
WP_004899294.1\|3464901_3465765_-	HlyD family secretion protein	NA	NA	NA	NA
WP_004899298.1\|3465761_3465977_-	DUF1656 domain-containing protein	NA	NA	NA	NA
WP_071888940.1\|3468843_3469875_+\|transposase	IS630-like element ISEc33 family transposase	NA	NA	NA	NA
WP_144340097.1\|3470376_3471502_+\|transposase	IS3 family transposase	S5WIU1	Leptospira_phage	3.9e-51	42.4
3473206:3473220	attR	NA	NA	NA	NA

DBSCAN-SWA_9

3543767 : 3557254

Salmonella_phage(18.18%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077255787.1\|3543767_3544736_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	8.7e-185	98.4
WP_077255791.1\|3544737_3545733_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	9.0e-185	98.4
WP_038435495.1\|3545904_3546909_+	NAD-dependent epimerase	E3T4Y8	Cafeteria_roenbergensis_virus	1.4e-31	29.5
WP_004144151.1\|3547309_3547432_+	small membrane protein	NA	NA	NA	NA
WP_004152483.1\|3547855_3549022_-	UDP-glucose 6-dehydrogenase	M1I798	Paramecium_bursaria_Chlorella_virus	4.1e-112	54.7
WP_004175260.1\|3549202_3549757_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	1.9e-51	57.6
WP_038435496.1\|3549771_3550662_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	6.2e-28	34.2
WP_038435497.1\|3550693_3551563_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	1.7e-110	66.7
WP_038435498.1\|3551589_3552654_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	3.4e-105	55.0
WP_038435768.1\|3552812_3554183_-	O9 family phosphomannomutase RfbK1	A0A127AWJ1	Bacillus_phage	1.4e-31	26.2
WP_038435499.1\|3554205_3555621_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	A0A1V0SH58	Hokovirus	8.9e-53	30.8
WP_038435500.1\|3555847_3557254_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	4.7e-38	28.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP009864

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

0 : 46849

Escherichia_phage(28.57%)

transposase,integrase

attL 2606:2623|attR 9790:9807

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001749988.1\|2132_2702_-	recombinase family protein	E5FFF9	Burkholderia_phage	5.2e-36	43.2
2606:2623	attL	NA	NA	NA	NA
WP_000845048.1\|3094_4108_-\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
WP_004201280.1\|4263_4737_+	trimethoprim-resistant dihydrofolate reductase DfrA14	G3MBI7	Bacillus_virus	8.4e-16	28.9
WP_001144737.1\|4957_5224_+	plasmid mobilization relaxosome protein MobC	NA	NA	NA	NA
WP_001389365.1\|5366_6131_+\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_004098817.1\|6391_7606_+	type II site-specific deoxyribonuclease	E5E3X4	Burkholderia_phage	1.2e-34	42.5
WP_072094655.1\|7639_9043_-	DNA cytosine methyltransferase	E5E3X6	Burkholderia_phage	9.0e-106	50.6
WP_001749967.1\|9454_9661_-	hypothetical protein	NA	NA	NA	NA
WP_064577928.1\|9665_10154_-	restriction endonuclease	NA	NA	NA	NA
9790:9807	attR	NA	NA	NA	NA
WP_001452736.1\|10362_10674_-	hypothetical protein	NA	NA	NA	NA
WP_001749965.1\|10709_11024_-	KikA protein	NA	NA	NA	NA
WP_001749964.1\|11020_11365_-	hypothetical protein	NA	NA	NA	NA
WP_024129965.1\|11380_11731_-	H-NS histone family protein	NA	NA	NA	NA
WP_001749963.1\|11794_12529_+	lytic transglycosylase domain-containing protein	NA	NA	NA	NA
WP_000440698.1\|12537_12819_+	hypothetical protein	NA	NA	NA	NA
WP_001749962.1\|12828_13122_+	hypothetical protein	NA	NA	NA	NA
WP_000496058.1\|13171_13489_+	VirB3 family type IV secretion system protein	NA	NA	NA	NA
WP_001749961.1\|13488_16089_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA
WP_001749960.1\|16106_16820_+	hypothetical protein	NA	NA	NA	NA
WP_001749959.1\|16827_17055_+	IncN-type entry exclusion lipoprotein EexN	NA	NA	NA	NA
WP_001749958.1\|17070_18111_+	type IV secretion system protein	NA	NA	NA	NA
WP_000646594.1\|18329_19028_+	type IV secretion system protein	NA	NA	NA	NA
WP_000735066.1\|19038_19923_+	TrbG/VirB9 family P-type conjugative transfer protein	NA	NA	NA	NA
WP_000101710.1\|19922_21083_+	type IV secretion system protein VirB10	NA	NA	NA	NA
WP_000128596.1\|21124_22120_+	Flp pilus assembly complex ATPase component TadA	NA	NA	NA	NA
WP_000792636.1\|22119_22653_+	phospholipase D family protein	A0A1B2LRT6	Wolbachia_phage	5.8e-21	33.9
WP_002210551.1\|22826_22955_-	hypothetical protein	NA	NA	NA	NA
WP_004152397.1\|26670_27990_+\|transposase	IS1182-like element ISKpn6 family transposase	Q9MBP7	Staphylococcus_prophage	1.9e-12	24.2
WP_004152396.1\|28239_29121_-	carbapenem-hydrolyzing class A beta-lactamase KPC-3	A0A1B0VBP7	Salmonella_phage	2.8e-73	52.2
WP_004152394.1\|29507_30287_-	IS21-like element ISKpn7 family helper ATPase IstB	A0A2L1IVB6	Escherichia_phage	2.5e-89	61.8
WP_004199214.1\|30283_31309_-\|transposase	IS21 family transposase	A0A2L1IVA1	Escherichia_phage	1.4e-87	50.3
WP_004152392.1\|31415_34445_-\|transposase	Tn3-like element Tn4401 family transposase	NA	NA	NA	NA
WP_004152391.1\|34554_36270_+	Tn3-like element Tn4401 family resolvase TnpR	NA	NA	NA	NA
WP_001217881.1\|37384_37942_+	recombinase family protein	Q1MVP4	Enterobacteria_phage	2.0e-93	98.4
WP_014454105.1\|38175_38730_+	aminoglycoside N-acetyltransferase AAC(6')-Ib'	NA	NA	NA	NA
WP_001206315.1\|38799_39588_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1	NA	NA	NA	NA
WP_000722315.1\|39647_40472_+	oxacillin-hydrolyzing class D beta-lactamase OXA-9	NA	NA	NA	NA
WP_001067855.1\|41970_42675_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_012561167.1\|43247_43613_-	hypothetical protein	NA	NA	NA	NA
WP_012561166.1\|43612_46849_-	conjugative relaxase	U5J9B0	Bacillus_phage	2.4e-05	27.3

DBSCAN-SWA_2

58494 : 60188

Morganella_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000861760.1\|58494_58935_+	translesion error-prone DNA polymerase V autoproteolytic subunit MucA	A0A1W6JNS2	Morganella_phage	1.2e-27	48.8
WP_001749980.1\|58922_60188_+	translesion error-prone DNA polymerase V subunit MucB	F1C5A5	Cronobacter_phage	2.2e-119	53.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP009865

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

4037 : 66092

Salmonella_phage(42.86%)

transposase,integrase

attL 29852:29897|attR 53088:53133

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000654804.1\|4037_5006_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.0e-185	99.4
WP_050484630.1\|5194_6583_+	sugar porter family MFS transporter	NA	NA	NA	NA
WP_077255809.1\|6703_7672_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.4e-171	91.3
WP_077255810.1\|7807_8776_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.7e-180	96.6
WP_023288366.1\|8964_9981_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_023288364.1\|11231_11768_+	hypothetical protein	NA	NA	NA	NA
WP_017900946.1\|14088_15099_-	replication initiation protein	J9Q7H0	Salmonella_phage	1.1e-86	53.5
WP_023287153.1\|15828_16995_+	plasmid-partitioning protein SopA	A0A2I6B2X3	Macacine_betaherpesvirus	7.5e-223	97.2
WP_004117790.1\|16994_17966_+	ParB/RepB/Spo0J family plasmid partition protein	I3WF22	Macacine_betaherpesvirus	7.0e-150	86.9
WP_004189163.1\|19720_20161_+	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	2.6e-19	60.3
WP_040120112.1\|20157_20508_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	8.9e-39	63.8
WP_004902302.1\|20538_22131_+\|transposase	IS66-like element ISKox1 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.2e-176	61.8
WP_032747566.1\|22224_22680_+	hypothetical protein	NA	NA	NA	NA
WP_003031967.1\|23428_24397_-\|transposase	IS110 family transposase	A0A1S7J231	Thermus_phage	2.8e-13	29.1
WP_020477096.1\|25660_26104_+	hypothetical protein	NA	NA	NA	NA
WP_032409750.1\|26113_26521_+	hypothetical protein	NA	NA	NA	NA
WP_014386528.1\|26563_27523_+	hypothetical protein	NA	NA	NA	NA
WP_004181760.1\|27519_28278_+	hypothetical protein	NA	NA	NA	NA
WP_004197568.1\|28274_28598_+	hypothetical protein	NA	NA	NA	NA
WP_072193960.1\|28895_29864_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	8.5e-172	91.3
29852:29897	attL	NA	NA	NA	NA
WP_017901102.1\|30196_31333_-\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_016946352.1\|31509_31764_+	transcriptional regulator	NA	NA	NA	NA
WP_016946353.1\|31849_32917_+	hypothetical protein	NA	NA	NA	NA
WP_107835450.1\|33051_33213_-\|transposase	Tn3 family transposase	NA	NA	NA	NA
WP_004729622.1\|33406_34159_-	alpha/beta hydrolase	NA	NA	NA	NA
WP_001567390.1\|34399_35269_+	DMT family transporter	NA	NA	NA	NA
WP_023287190.1\|35402_36626_+	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA
WP_004729618.1\|36811_37585_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_001194072.1\|37650_38352_-	DsbA family oxidoreductase	NA	NA	NA	NA
WP_006687059.1\|38417_39524_-	alkene reductase	NA	NA	NA	NA
WP_040120148.1\|39737_40067_+	thioredoxin family protein	V9SJ74	Achromobacter_phage	5.7e-11	34.7
WP_000888080.1\|40096_40435_-	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA
WP_000210409.1\|40439_41021_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_000108589.1\|41162_41720_-	OsmC family protein	NA	NA	NA	NA
WP_012695450.1\|41904_42489_-	recombinase family protein	A0A219YA40	Aeromonas_phage	2.0e-22	36.1
WP_144340103.1\|45784_46195_-	hypothetical protein	NA	NA	NA	NA
WP_004186900.1\|46985_47870_-	hypothetical protein	J9Q7H0	Salmonella_phage	2.6e-50	43.2
WP_014386535.1\|49123_49582_+	hypothetical protein	NA	NA	NA	NA
WP_032437747.1\|50421_50763_+	hypothetical protein	NA	NA	NA	NA
WP_016946198.1\|50870_51083_+	hypothetical protein	NA	NA	NA	NA
WP_004902250.1\|51204_51483_+	DUF1778 domain-containing protein	NA	NA	NA	NA
WP_016946197.1\|51473_51956_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_077255812.1\|55171_56140_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	9.1e-182	97.5
53088:53133	attR	NA	NA	NA	NA
WP_187524108.1\|56157_56931_-	hypothetical protein	NA	NA	NA	NA
WP_023279773.1\|56996_57965_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.9e-180	96.6
WP_023328906.1\|58134_58440_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_040120117.1\|58441_58975_+	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_040120118.1\|59167_60091_-	cation transporter	NA	NA	NA	NA
WP_071888966.1\|60351_60672_+	metalloregulator ArsR/SmtB family transcription factor	A0A2H4J145	uncultured_Caudovirales_phage	1.1e-19	46.7
WP_040120120.1\|60717_62007_+	arsenite efflux transporter membrane subunit ArsB	A0A2H4J144	uncultured_Caudovirales_phage	1.9e-166	70.4
WP_035897523.1\|62019_62448_+	glutaredoxin-dependent arsenate reductase	A0A2H4J8T1	uncultured_Caudovirales_phage	1.5e-51	70.7
WP_040120121.1\|62733_64077_+\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_004187019.1\|64092_64377_-	type II toxin-antitoxin system RelE/ParE family toxin	A0A2H4JBF4	uncultured_Caudovirales_phage	6.4e-19	55.9
WP_004187025.1\|64366_64615_-	plasmid stabilization protein	NA	NA	NA	NA
WP_077255813.1\|65123_66092_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	9.4e-171	91.0

DBSCAN-SWA_2

71386 : 144093

Bacillus_phage(20.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_077255814.1\|71386_72355_+\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	2.1e-170	90.7
WP_032415729.1\|72956_73739_+	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	6.1e-136	96.1
WP_004181705.1\|74921_75572_-	GntR family transcriptional regulator	NA	NA	NA	NA
WP_004181707.1\|75911_77156_+	divalent metal cation transporter	NA	NA	NA	NA
WP_040120125.1\|77164_77944_+	LamB/YcsF family protein	NA	NA	NA	NA
WP_004187003.1\|77933_78740_+	putative hydro-lyase	NA	NA	NA	NA
WP_004181711.1\|78752_80336_+	5-oxoprolinase/urea amidolyase family protein	NA	NA	NA	NA
WP_004187005.1\|80335_82081_+	ATP-grasp domain-containing protein	NA	NA	NA	NA
WP_001101446.1\|82626_83652_+\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_023280920.1\|83970_84939_-\|transposase	IS5 family transposase	A0A1B0VFY5	Salmonella_phage	1.1e-182	98.1
WP_004118347.1\|85971_86406_-	hypothetical protein	NA	NA	NA	NA
WP_004152084.1\|86621_88022_-	copper resistance membrane spanning protein PcoS	W8CYF6	Bacillus_phage	4.1e-18	26.3
WP_001188930.1\|88018_88699_-	copper response regulator transcription factor PcoR	W8CYM9	Bacillus_phage	8.7e-30	34.4
WP_004118344.1\|88753_89683_-	copper resistance inner membrane protein PcoD	NA	NA	NA	NA
WP_000025662.1\|89687_90068_-	copper resistance system metallochaperone PcoC	NA	NA	NA	NA
WP_171888087.1\|90107_90998_-	copper resistance outer membrane transporter PcoB	NA	NA	NA	NA
WP_000925242.1\|91003_92821_-	multicopper oxidase PcoA	NA	NA	NA	NA
WP_004181747.1\|95507_97046_-\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	6.1e-273	91.8
WP_004114612.1\|97095_97443_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	4.1e-60	96.5
WP_004114613.1\|97439_97817_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZBP6	Stx2-converting_phage	1.6e-57	91.3
WP_004118669.1\|98668_99406_+	peptidoglycan DD-metalloendopeptidase family protein	A0A2H4JAF5	uncultured_Caudovirales_phage	1.2e-11	32.5
WP_000843497.1\|99439_99637_-	DUF2933 domain-containing protein	NA	NA	NA	NA
WP_004098955.1\|99677_102125_-	Ag(+)-translocating P-type ATPase SilP	A0A218MNH6	uncultured_virus	7.6e-84	35.8
WP_000758228.1\|102251_102692_-	hypothetical protein	NA	NA	NA	NA
WP_004098958.1\|102778_105925_-	Cu(+)/Ag(+) efflux RND transporter permease subunit SilA	S5VTK5	Leptospira_phage	4.0e-61	22.5
WP_004098959.1\|105935_107228_-	Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB	NA	NA	NA	NA
WP_001246153.1\|107341_107695_-	cation efflux system protein CusF	NA	NA	NA	NA
WP_000475512.1\|107723_109109_-	Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC	NA	NA	NA	NA
WP_001572351.1\|109298_109979_+	copper/silver response regulator transcription factor SilR	W8CYM9	Bacillus_phage	2.1e-31	35.6
WP_003032875.1\|109971_111447_+	copper/silver sensor histidine kinase SilS	W8CYF6	Bacillus_phage	1.0e-27	30.1
WP_004187113.1\|111697_112129_+	silver-binding protein SilE	NA	NA	NA	NA
WP_004187110.1\|112276_112627_+	DUF305 domain-containing protein	A0A218MND9	uncultured_virus	6.0e-19	51.4
WP_032426221.1\|112812_113721_-	HNH endonuclease	NA	NA	NA	NA
WP_000361404.1\|114264_115287_-	helicase UvrD	NA	NA	NA	NA
WP_004206609.1\|115271_116834_-	AAA family ATPase	NA	NA	NA	NA
WP_001044770.1\|116907_117324_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA
WP_001261282.1\|117320_117551_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA
WP_004206608.1\|118016_118592_-	SLATT domain-containing protein	NA	NA	NA	NA
WP_040120126.1\|118599_119928_-	nucleotidyltransferase	NA	NA	NA	NA
WP_004206605.1\|120112_121486_-	hypothetical protein	NA	NA	NA	NA
WP_032426215.1\|121496_122585_-	hypothetical protein	NA	NA	NA	NA
WP_040120127.1\|123325_124249_-\|transposase	IS5 family transposase	Q9MCT5	Escherichia_phage	5.3e-163	90.9
WP_040120128.1\|125531_126290_+	3-oxoacyl-ACP reductase FabG	F2NZ40	Diadromus_pulchellus_ascovirus	3.9e-15	32.0
WP_052191562.1\|126521_128012_+	cytosine permease	NA	NA	NA	NA
WP_040120129.1\|128001_129246_+	M20 family metallo-hydrolase	NA	NA	NA	NA
WP_040120130.1\|129242_130628_+	dihydropyrimidinase	NA	NA	NA	NA
WP_052191565.1\|130708_131422_-	FCD domain-containing protein	NA	NA	NA	NA
WP_102781620.1\|131556_132450_-	allantoinase PuuE	NA	NA	NA	NA
WP_175439479.1\|132485_132845_-	RidA family protein	NA	NA	NA	NA
WP_040120133.1\|132844_133864_-	NAD(P)-dependent oxidoreductase	A0A1D7XFE8	Escherichia_phage	7.7e-14	25.4
WP_040120134.1\|133874_134753_-	ATP-binding cassette domain-containing protein	F2Y302	Organic_Lake_phycodnavirus	5.2e-11	28.2
WP_040120135.1\|134745_135630_-	ABC transporter ATP-binding protein	A0A2R8FG22	Brazilian_cedratvirus	1.2e-15	32.4
WP_052191566.1\|135622_136435_-	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA
WP_052191567.1\|136464_137076_-	hypothetical protein	NA	NA	NA	NA
WP_040120136.1\|137146_138391_-	Zn-dependent hydrolase	NA	NA	NA	NA
WP_123677978.1\|138862_139537_-	MFS transporter	NA	NA	NA	NA
WP_023288261.1\|141182_141626_+	hypothetical protein	NA	NA	NA	NA
WP_040120159.1\|141646_142396_+	hypothetical protein	NA	NA	NA	NA
WP_000654804.1\|143124_144093_-\|transposase	IS5-like element IS903B family transposase	A0A1B0VFY5	Salmonella_phage	1.0e-185	99.4

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009863

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP009864

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP009865

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection