CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP018906	Lactobacillus curieae strain CCTCC M 2011381 chromosome, complete genome	4 crisprs	csa3,DinG,cas3,DEDDh	0	3	2	0

Results visualization

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP018906_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018906_1

379434-379547

Orphan

Consensus_repeat	Method
GCACTATCGGCAGCACTCTTAGC	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP018906_1

>merge|NZ_CP018906|1|379434-379547|CRISPRCasFinder
GCACTGTTGGCGGCACTTTCACTAGCAGCCTTTGCTTCATTAGCAGCACTTTCAGCGGCGCTCTTAGCAGCCGACGTTGCGGCAGCTGACGCACTATCAGCAATTACCTGAGCA

>NZ_CP018906|1|1|379434-379547|CRISPRCasFinder
GCACTGTTGGCGGCACTTTCACT	AGCAGCCTTTGCTTCATTAGCA
GCACTTTCAGCGGCGCTCTTAGC	AGCCGACGTTGCGGCAGCTGAC
GCACTATCAGCAATTACCTGAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018906.1\|WP_035165997.1\|401296_403885_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NZ_CP018906.1\|WP_191982080.1\|369644_369860_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173788
NZ_CP018906.1\|WP_035165982.1\|387787_389059_-\|KxYKxGKxW-signal-peptide-domain-containing-protein	unknown	unknown	gnl\|CDD\|274741
NZ_CP018906.1\|WP_052127692.1\|398091_398613_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676
NZ_CP018906.1\|WP_035165978.1\|374949_375333_+\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|377540
NZ_CP018906.1\|WP_035165984.1\|391032_392502_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|223515
NZ_CP018906.1\|WP_052127677.1\|365440_366022_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180584
NZ_CP018906.1\|WP_052127675.1\|364795_365299_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018906.1\|WP_035165975.1\|364275_364680_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018906.1\|WP_035165977.1\|371657_371843_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018906.1\|WP_191982081.1\|394741_395935_-\|KxYKxGKxW-signal-peptide-domain-containing-protein	unknown	unknown	gnl\|CDD\|236138
NZ_CP018906.1\|WP_035165991.1\|396250_396988_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP018906.1\|WP_035165980.1\|375636_377400_-\|pyruvate-oxidase	unknown	unknown	gnl\|CDD\|213733
NZ_CP018906.1\|WP_052127683.1\|369917_371513_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173788
NZ_CP018906.1\|WP_052127685.1\|371865_374748_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018906.1\|WP_035165995.1\|399538_400705_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP018906.1\|WP_035165993.1\|398746_399439_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|225232
NZ_CP018906.1\|WP_052127679.1\|366061_366997_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367527
NZ_CP018906.1\|WP_052127689.1\|397054_397630_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP018906.1\|WP_035165987.1\|392579_394673_-\|fibro-slime-domain-containing-protein	unknown	unknown	gnl\|CDD\|162730

Protein	Function_ID	Function_description	E-value
NZ_CP018906.1\|WP_191982080.1\|369644_369860_-\|hypothetical-protein	gnl\|CDD\|173788	cd04056, Peptidases_S53, Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.	3.38214e-06
NZ_CP018906.1\|WP_035165982.1\|387787_389059_-\|KxYKxGKxW-signal-peptide-domain-containing-protein	gnl\|CDD\|274741	TIGR03715, cell_surface_protein_precursor, KxYKxGKxW signal peptide. This model describes a novel form of signal peptide that occurs as an N-terminal domain with a recognizable motif, reminiscent of the YSIRK and PEP-CTERM forms of signal peptide. This domain tends to occur on long, low-complexity (usually Serine-rich and heavily glycosylated) proteins of the Firmicutes, and (as with YSIRK) the majority of these proteins have the LPXTG cell wall-anchoring motif at the C-terminus.	5.3599e-11
NZ_CP018906.1\|WP_052127692.1\|398091_398613_-\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	7.28822e-11
NZ_CP018906.1\|WP_035165978.1\|374949_375333_+\|DUF805-domain-containing-protein	gnl\|CDD\|377540	pfam05656, DUF805, Protein of unknown function (DUF805). This family consists of several bacterial proteins of unknown function.	1.06652e-20
NZ_CP018906.1\|WP_035165997.1\|401296_403885_-\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	2.10798e-11
NZ_CP018906.1\|WP_052127689.1\|397054_397630_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.08021e-09
NZ_CP018906.1\|WP_052127677.1\|365440_366022_+\|hypothetical-protein	gnl\|CDD\|180584	PRK06481, PRK06481, flavocytochrome c.	7.54393e-05
NZ_CP018906.1\|WP_035165993.1\|398746_399439_-\|GTP-pyrophosphokinase	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	1.14867e-63
NZ_CP018906.1\|WP_191982081.1\|394741_395935_-\|KxYKxGKxW-signal-peptide-domain-containing-protein	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	4.81662e-07
NZ_CP018906.1\|WP_035165991.1\|396250_396988_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.31987e-38
NZ_CP018906.1\|WP_035165980.1\|375636_377400_-\|pyruvate-oxidase	gnl\|CDD\|213733	TIGR02720, Pyruvate_oxidase, pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name. [Energy metabolism, Aerobic].	0
NZ_CP018906.1\|WP_052127683.1\|369917_371513_-\|hypothetical-protein	gnl\|CDD\|173788	cd04056, Peptidases_S53, Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.	3.49809e-40
NZ_CP018906.1\|WP_035165984.1\|391032_392502_+\|glycosyltransferase	gnl\|CDD\|223515	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane].	7.46945e-10
NZ_CP018906.1\|WP_035165995.1\|399538_400705_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	2.2977e-73
NZ_CP018906.1\|WP_052127679.1\|366061_366997_-\|hypothetical-protein	gnl\|CDD\|367527	pfam03496, ADPrib_exo_Tox, ADP-ribosyltransferase exoenzyme. This is a family of bacterial and viral bi-glutamic acid ADP-ribosyltransferases, where, in Aeromonas salmonicida AexT, E403 is the catalytic residue and E401 contributes to the transfer of ADP-ribose to the target protein. In clostridial species it is actin that is being ADP-ribosylated; this result is lethal and dermonecrotic in infected mammals.	9.8188e-31
NZ_CP018906.1\|WP_035165987.1\|392579_394673_-\|fibro-slime-domain-containing-protein	gnl\|CDD\|162730	TIGR02148, ORFveg106_random, fibro-slime domain. This model represents a conserved region of about 90 amino acids, shared in at least 4 distinct large putative proteins from the slime mold Dictyostelium discoideum and 10 proteins from the rumen bacterium Fibrobacter succinogenes, and in no other species so far. We propose here the name fibro-slime domain.	3.10743e-13

>NZ_CP018906.1|WP_035165980.1|375636_377400_-|pyruvate-oxidase
MANTIDSGVAMIKTLESWGVDHIYGLPGGSINNVMYALREEQSKGNIKYIHVRHEEVGGLAAVDDGRVTGKIGVAFGSAGPGATHLFQGAYDAMMDRVPTLFLVGQVPHNFMNADFFQEQDESQLFSDAAVYNRTVTTAESLPKVVDEAIRQAYAKHGPAVVVIPNDLAHEQIPADGYYSSAANFEKAEAPEPKGEKVEEALKLIKEAKKPVIYMGQGVRGAADDMMELSRKLQMPIIYAALAKDVIPYEFPALLGSGMRVASKPANEALKETDLMLFVGSNFPFSEILFNPNAKFIQIDSNPAMLGKRHKTDVSMYADAKKALKKFLEMSEQLPESPWYQANIDNANNWREYNEHMMNKTDGDLRFEPVFKEINRIAKDDALFSIDVGDVTQNAVRLIKNSGKERWFTSGLFATMGAGLPGALAAKLSHPDKQVFSLAGDGAQTMVMQDLITEKLYNLPIINVVFKNYELGFIVDEQEDEGEERFGVSLGGIDFAQVAEAQGVHGIHVTKVEELPKAFDEALEMTEHQNEPVLIDVQITGERPIPVEKLELDPAENSPEAIAQFKKRYYAEDLKPFSEFLANHGVK
>NZ_CP018906.1|WP_035165978.1|374949_375333_+|DUF805-domain-containing-protein
MQAYKEFWTKMFVFNAKATRKQYWISIIINAIVVGLVSLVTGDYKYVGTETTQAFTEHNYSLVFSIFLLLVWIAEFTIRARRLHDSGHSNWWILLYMIPLIGWIWLFILLVMPSKDDNRWPDNQSEV
>NZ_CP018906.1|WP_052127685.1|371865_374748_-|hypothetical-protein
MKRWIKQIAPALMIILGVLLAISCSAKADDQVKMDYTGSSEVNSAKSMPFTFTIPQGLAKTDSQIILHIDKDAVEPGTDSIKFTDTDTNVVSMDPIDDNGNVVITLGKGVESLIEYPLKVSLLIKPSSQVGLDKGKPYKANVTAKFVSKDGNAIALNSGNPFTININNYAGGDSGDANFSVVNFGMDRNNPLKFPDDFKDSAGNKYIPNYYAQNGDQYQFDYTGNYMTGYTQVQFPKLAAGESLNDVKLNVDTSRSIYPKSIKLFDYTNTAVPTDYYKVVTTDTGFTIDFSGWPKDKPINGLSAIYAVKTQSANDKVKVTSSATITTSLDRTLKQDGNSAAFAFINNSNGEFIPSLVLKPDGYTISQGQNYVPNWSDFVIKAFDPDHPKHFNPDEGTYNITIDGDSSSGNKTTYTDGTNTITVNGDISKPGKYPVDIVFTNNKTNISSRVYTSTLTVVPKKVNDVKVTLIPYDEATNEPITGASVTKVGQPGNEIAIPEIDGWTFDTKNSKNPSNPFVIPDKDAKIPVYYKKNQPTSVSAILIPCDKTTGKKIPNVESTSITAVPGSKIEVPTLAGWTPVNAVPSTMPANGGDIKVYYQPNLPDQPNNVTVTIIPCDRATNKPIPNVSPIKMNAEPGEKVAMPEITGYNPESTSPITIPAGGGTIKEYYTKKSSTNGGGTTPTNGGSTPTTNNSSTSPTANNGSSSSQSTSSTSTQPVSPQPSNPQASGSLVATKGEAVYSLKPIYLYESKNFNSHERLAKYTKKPRVNRPMFVVIRYARDANGRLRYFVRDVNHLSKTDGKTGYITANTSYVRPVYYRSLHKVITVINPNGVNSYRTKKLTGFVKHYRQGTILKVSRIVTHNLTTRYVLTNGKIVTANRKLVKSGKTSFPKNITVKKGIKLYSTLNSKSSKQHIKAGKKLQVKKVVYTVPSSVTQSGTKRYQVAGGYVTANSKYVKITK
>NZ_CP018906.1|WP_035165977.1|371657_371843_-|hypothetical-protein
MTKQKLQLIALILIGVSILLKILGGLNFLAPVAGIVNFIALITALVAVVLAFWLITRNAKH
>NZ_CP018906.1|WP_052127683.1|369917_371513_-|hypothetical-protein
MKKLGIILGVMAFSGIVGSQVVANAAKKNDKSTFMISLNPKNKAALEDFVYDTVDPASPSYHQYLTPSQFATRFGQSDSVINEFKSHFKKYKVTVKPNAGNLSLKVSGSYNNVVKALKAKPTNQNSAKYYTMYTLPKTLQDKTQAIIGFGVENNYQKKAAKKQAKTKFASDIQVKADTPNLKLSKADFSDKYAAKKFTSRYGVDKLYSQGLTGKGQSVGLITLSDFHTQDIKTYLNKMGGNTDTNRIKRYYTSSSAKYVSGKITKPFKKVNEAYMAQVEATLDVQQAASVAPNSRINVYIGTGNGNQTQSDYDYYNAFVQAISANRDKTLSTSFNVFNEVADKTYGLTENAKQYNDALNLAFQQAAAQGITMFNAAGDNGARDKSNPKLNLSISMSPYLVEVGGTTLPFTKKIDGRTVTVKQEQGWGNIKQIAKADVKEQSFSAGGGGFSQLNALPRYQQGVSGVGTFRAVDYIKYDKQGKGIINPSPRVIYGTSRGRNVPDVSANSDPMTGYAMYVTNGTPGQKGVKAGK
>NZ_CP018906.1|WP_191982080.1|369644_369860_-|hypothetical-protein
MNEGMNGSSIGFWGPQIYKFAQQPLSPFTPLDSTSNNNLYYTGQPGKLYNQATGLGTVDFNQLFSDFKAGK
>NZ_CP018906.1|WP_052127679.1|366061_366997_-|hypothetical-protein
MKTKVGILIATFTLCLPLMADTSLAAKTKPKKLPTQTYVTSKYHDETPNQFVLKYATTAYSLAGGEPSFTQRTVVPKNSRITVLQKSGKGAIISAQGFSSLMYVKNISGLTYSTKTYKVSKTALAKLNKQTKAWAKQLSKAERKSIDYYSGTGYTKLNNYLRYGDGNKTVAKNANLLTSALQQYNLKTPMTVYRGVSTSGLRKSLNGEKLRVGALYDDPGFSSTSISRYTALGFGSKLLLKIQLPKGNTGAYIDPVSYNVGEKEFLINPGANMIVTKVQTVTYTVKEKTKGHQAKTSLKDKYKLISVSMQR
>NZ_CP018906.1|WP_052127677.1|365440_366022_+|hypothetical-protein
MKLKATLLTLLLLIGIGLAGCSSNSEKTSSSSSDNKVEKQSDTSNKSSDSQSSAVKDDDDNDDQDDNDSNTSATSSNSSSKAKVRYRTVKFQAQLDDVDDSRLYQSVPLSRRTKTASWNSVDAHEGKRVYVDKKAIVLTRDRDDHDDDDDYDDNDNDDNGYDSEEYYRIRFSASNSAKKYWVEEDVVDTDNDD
>NZ_CP018906.1|WP_052127675.1|364795_365299_+|hypothetical-protein
MKLKAILLTLMLFVGIGLAGCSSHAEKSTNQDNKVENHAKVNDKAKISTEDQPVAHDDHNQTMALSSSKAKVKYKTVKFRAQLDDLDDSKLYKYVPGTRKNKTYSWKKVKAYEGKRIYVDKKATVYTRDRDDDDDDYDSEEYYRIRFSASNKATKYWVEEDVVDDDD
>NZ_CP018906.1|WP_035165975.1|364275_364680_+|hypothetical-protein
MKKHILLGALALSTFGVMFASPTSANAATWHKGVPSILKSGVWKVAGVKEYWAFNNKGVYDIDGKYVYETNKPLYTKSGNKYTIKSNYSKTKNLKYVYCTLTKINKNKFKFVMPHTSKDKVVYYTTLTRTYKIK
>NZ_CP018906.1|WP_035165982.1|387787_389059_-|KxYKxGKxW-signal-peptide-domain-containing-protein
MSKRNKELKDQISSEKLHYKMYKSGKQWLFAAITIVAFGGGVALADNQQVKAATPVYGESSSTSSKTSIPVDSSSANKSVVVYNGGSSSSSSSKASSSSSSTSKAPIAVYGQATTDSSSSSSSVNRSSANSSSNQTSQVPVYSGDRSSSTSTSSSDDTPSQATVGSSSQDSSSTSSTSSNTVVSGNGSTEKSSSSVDNGGADQASSSSNKEQTQDNDRRQADNDDQVTTASSSVKNNDDNEFLARNDNDANANNSNENDSNPDNAANDSQLSAAPESNASFNDPAREAIAAASGAVSAASSIAAINSDSSSAQGRRAMLMFANEFVQTTSLTNSDVNDQNEVSDDTDDNDLELLSDDSEDLASTDEVAPQSAQVVAFAATSADLEDEDVELLADASAEADVWTQFSNTLADAKSRKSADYTTQ
>NZ_CP018906.1|WP_035165984.1|391032_392502_+|glycosyltransferase
MEYLILDTVSDAKFEQNNTLKQQISILKQAGSDFKVLTRDYNRYQAKHLKELGIAEDKVVNMFDFFQNAVNIPHAQPTIHDLPQIPAEAYEIQPHGSNFNELRDGGKLLAHQQVMPETFGQVDYIRYYDQYGNYSTIEYYDVRGFKTMEQYFHPNGQVAYEFWYKPSGERVVEAIYMFGPDKKEVINTSWHVNDFKGDSYELDNIDQLFSLFLNEQIADDDQARLINDTPDSIHLLSSDLIGNPEIYLKLSQVNDRDAIKKYLEITPAAKLLVDTDDQAAIIEPLGAPVFVDPEYGLTNTELLRSYADITKRLPENVIAFTDLRSSEEINTLINAWRIVHEANDTATLTIVGSPIGATNLTPIFNKLKELNLFELVSIQLDAKKVPEVYDRSTLMLLPSTMYGTTSNVAEAALRSIQTVVVDDNELAAWVASIGAGSTVEKDAVNLADAIINLVKNPETLIKASQAAHSATNQLSLENSVAKWEAVLNN
>NZ_CP018906.1|WP_035165987.1|392579_394673_-|fibro-slime-domain-containing-protein
MATILEYIEYKYSNINESIPDGYSVKNFYERDDKLYEYSDGSFKEVNDKQLLKFFKDVKNKGYVTSGYLNDDSQEIDEKDLLAKAIEAGQDYVQIGNKIYHIDYTSDPDDIHDKGIIYSITVPKVMPKTDLKNSGEDNKTLKELESINPGVKISLFDYWLKDDGTEKGGNVNDLGINNGKYLKFSAERAGLTNPNPNNVYKDYAISQEIVRDYLDENGYPIYKSLIDQSLAYLFDDSQVEGKKVVFKDQDGENLFVSDGNGGFSYDSKKNHAYLDENGDIKLFNWNNMPGAKTGKPERFGQFFPLDRLDEFFEFQNGVGVKTKQYKTGSVNSNAENGLNHYFGMTMEMGYIHPKDGEVESVKDGAKVKTPMKFEFSGDDDFWLFIDNKLALDIGGIHDAASGSIDFSTGVVTAQVKTGQPEAVVGQIVSSETETVPKNVKKIVIPNWNKADSEHQIKLFYLERGHEESNLKMNFNLQIPQHNYAENNAFAVDDKNPSKKVAYAVGSTYSERETTRHTYGTYTELGIRETNTGGGSNPGVVPPNPGTPGTPGTPSTPGDSGDLERPEGLPESGGTSNGSIGGSTGNLSGTTNSGSSQQVSAVDLATGSGNQDGNLHMVDLTSDGSESSDQIVSESDQTGHSAPGVADQPDKVSTSQTNQVGTLPQTGEGDEHASTIGAALLAGLSVLTFGVYRRKRKQ
>NZ_CP018906.1|WP_191982081.1|394741_395935_-|KxYKxGKxW-signal-peptide-domain-containing-protein
MKEKLKNTNKTVRYRLYKAGKLWVIGGSCVIGMGILGCSSALAESSTETAKTSSSVPVYTPANPDPKPAKPVAPKQTTKSPATVVKQQPAAQQATTATKPAANPVQSYQSAPQQNTQPKSSQSVAKPAVTQSQPRSQVKPQVSQAETAPQTQVDNQQVTQGQETKSQAAKASPTAEVEKPATQNSTVKKQTSQMKAQSPVAAKASTKADKEVIDPNEVKEENTSEYKRKFYEVMEDGKQVFYEQINDSFVKITDQEFLDQIQETIDKKIAKRHYLTKEQLKELPAGTEFSGDYRIYHFIDKVPEGFEGDTIEGKVMEFTKPGEDGANPVYVVKRKVNGEIRYFKKVDGQFTEDVTEKVKSIINTEKLVDRYLKAVNDGGLTEEEIKDKLEKQSKVAI
>NZ_CP018906.1|WP_035165991.1|396250_396988_-|glycosyltransferase-family-2-protein
MNDSILMTVVVPTHNLENYVGKTLDSLANQQYRNFEVIVVDDASTDKTVAVAERYVKLDPRFRVVKLTKHSGVSKARNAGIDDAKVEAITFVDGDDLVEPDFLQVMADGMAEPKVDMVTVGYRWGFRGAGALEHRGLVSVSKREVYDSINTRGNLIGGYVWNKAFRVSVLREKQIRFDETLDLAEDLLFTADYVYATNNFLLDAKPLYEKVSRPGSTIHSASFKQREREYEVRQHIDDMGAKIPS
>NZ_CP018906.1|WP_052127689.1|397054_397630_-|TetR/AcrR-family-transcriptional-regulator
MNDNDKRVMKTKQSIREAFFKQLAEKGIERMTVKAILDDAGLNRTTFYAYYTDKYDLLEKTQEGIMNQIIRIKRDNPVGGGKNLDKTEQYVRSYFLALFKYIQANHQVLQLLFANQNQIAFLKDVTHGRPEFYNHWRPVVSQVPGIDPRNSYAALVGVVINFFFEGERDHFKENPAKIAGVLADIVLRYLR
>NZ_CP018906.1|WP_052127692.1|398091_398613_-|stage-II-sporulation-protein-M
MVATWIISFAIVKLTGSTEAIRSFLKASIGSENTLKGGSFLPLFMHNFTGSVMIIILGLIPIPLYYAFIVYNAATVGLVLTLTAHPIAMFMAGILPHGILEIPAQIISAAISAKVVWFVFDKYIRHRDRPETFGLIIKNAVIDTLVFVLPLLFVAAIIEFSITPGLIHTFVGK
>NZ_CP018906.1|WP_035165993.1|398746_399439_-|GTP-pyrophosphokinase
MIIERENHFNIKKIERQFKAANLEKELHGIKQVSQEYLLRHSALNEIGTKLENLDDEYSVSFDHNPIHHMEERMKEPTSLIEKVARKGMELTLENVFENIYDIAGIRVITNYIDDIYQVRDALAKQSDITVIKEKDYIKNPKPNDYRSYHLIVSVPVFQDEGPKNVAVEIQFRTIGMDMWASLEHDLRYKSFADDNKADQYASRLKKYSDQLYEIEANMQQIFNGLQETE
>NZ_CP018906.1|WP_035165995.1|399538_400705_+|MFS-transporter
MKKFGTRSFILVAIGFILGMSEFIMVGILNDLSASFHVGISDVGFLVTLFAIVYAIATPILTILVGSHRLYRVMILLLGIFIAANALTAIAPNYTILTLSRILTAIVSGITVSIAITFSAVIAPREKRAWLVSWVFSGFSIASVFGVPIGTWLSDKFGWRIVFWLIVVISILFTILFMLSLPTDIRQGKMDHFTQQFAIFKDKRILLGILLPTLNLGGVYVVYTYLRPIIVSGLGFPTAFVTPILFVYGFASLASNQISGRLANYDGLKTMTKVYLLQIVTLVALPLLFGLPWIALISLIILGFTMYLQNSPMQMFYLEVAETDYPQSMVMSSSLNSIFSNVGIAVGSATGGLMVNATGLKSLGIGGAIYTIAALAVLVVLNKVRKVR
>NZ_CP018906.1|WP_035165997.1|401296_403885_-|ABC-transporter-permease
MNKLLLRNIKDSFGRFIAIAMIIMLGVLIFVGVKATGPALNDSLQAEVNSQKLSDVQIISTKGFTAKDVAAAEKVSGAKAETSKYKAVIGGKNRDAIALYGYDKQDKQNLPKIKSGRLPKANNEILLDSKAKTDEGYKLGDTFKFAKSADLTRRTFKVVGFADSAQYVDNATRGAANIGNGQVQYFAYVPKKMMNLPVATALNVRFSSLQDKGTFGSKYKDAVKDKVKQLKRVLNARKVDRAAELAKPATKKLTSAQSKLDAAKRQLATAAKAAPTNSRVKIQQKQLAKQQAKLDQQKKKVKDATTPTYIWSTREDFPGFSGYGESSDRIAAIANVFPLFFFLLAALITFTTVTRMVEESRSQIGTLKALGFSKGSIAYQYIMYALLAAVVGIVFGSVLGNELLPRLVISMYQNYVLGGAVVHFDWTSIGFAMVLALISTVGAAIIVINREVKVVPSELMRPKAPKSSKKIWLEKVTFIWSKLKFNQKISYRNLFRFKSRGIMTILGIAGGTALILTGFGLDNSISSSGQRQYNDLIHYDAVVQSKTTDKLPEVQKTVKDAGNYKQSTVVSTGAAKVSKGDKSVADITVYSPKNEDQFSKYIKVKDVDSKKQLSLPNDGIVLTEKAAKILGVKKGDKISVTGQNNHKIQVKVAAIAENYVSNFMYIKRQNYQNVMGKQPSMKTLLVQLKKTNKSAETKLGKQWISKNTNILGINFTTDQKKTVTNMSSQMGPIVWIFILLSGLLSFIVLYNLNNINISERQRELSTIKVLGFFDPEVTMYVARETIILAIVGIVGGYGLGNLLTMYVLHQAETNAVIFPLVIKPLGYVVATVLMIVFNLVVIAITHRHLKNVDMVEALKSNE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP018906_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018906_2

379749-380011

Orphan

Consensus_repeat	Method
GCACTATCGGCAGCACTCTTAGC	CRISPRCasFinder

5 spacers

The CRISPR arrays of NZ_CP018906_2

>merge|NZ_CP018906|2|379749-380011|CRISPRCasFinder
GCACTATCGGCTTCTTTGTTACCAGTTGCGGCAGCAATTGCTGCACTAGCACTATCAGCGGCACTCTTAATTGCGGCTGAAACAGCGGCACTAGCACTGGCAGCAGCGCTCTTGGCAGCTTCATTTACGGCTGCCGAAGCACTATTGGCAGCACTTTCGCTGGCAGCTTTTGCAGCATTTGCAGCACTATCGGCAGCACTCTTAGCGGCTTCACTGGCAGCGGAAGTTGCTGCAGCGGATGCACTATCGGCAGCACTCTTAGC

>NZ_CP018906|2|2|379749-380011|CRISPRCasFinder
GCACTATCGGCTTCTTTGTTACC	AGTTGCGGCAGCAATTGCTGCACTA
GCACTATCAGCGGCACTCTTAAT	TGCGGCTGAAACAGCGGCACTA
GCACTGGCAGCAGCGCTCTTGGC	AGCTTCATTTACGGCTGCCGAA
GCACTATTGGCAGCACTTTCGCT	GGCAGCTTTTGCAGCATTTGCA
GCACTATCGGCAGCACTCTTAGC	GGCTTCACTGGCAGCGGAAGTTGCTGCAGCGGAT
GCACTATCGGCAGCACTCTTAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018906.1\|WP_035165997.1\|401296_403885_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|223650
NZ_CP018906.1\|WP_191982080.1\|369644_369860_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173788
NZ_CP018906.1\|WP_035165982.1\|387787_389059_-\|KxYKxGKxW-signal-peptide-domain-containing-protein	unknown	unknown	gnl\|CDD\|274741
NZ_CP018906.1\|WP_052127692.1\|398091_398613_-\|stage-II-sporulation-protein-M	unknown	unknown	gnl\|CDD\|376676
NZ_CP018906.1\|WP_035165978.1\|374949_375333_+\|DUF805-domain-containing-protein	unknown	unknown	gnl\|CDD\|377540
NZ_CP018906.1\|WP_035165984.1\|391032_392502_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|223515
NZ_CP018906.1\|WP_052127677.1\|365440_366022_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|180584
NZ_CP018906.1\|WP_052127675.1\|364795_365299_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018906.1\|WP_035165975.1\|364275_364680_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018906.1\|WP_035165977.1\|371657_371843_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018906.1\|WP_191982081.1\|394741_395935_-\|KxYKxGKxW-signal-peptide-domain-containing-protein	unknown	unknown	gnl\|CDD\|236138
NZ_CP018906.1\|WP_035165991.1\|396250_396988_-\|glycosyltransferase-family-2-protein	unknown	unknown	gnl\|CDD\|366154
NZ_CP018906.1\|WP_035165980.1\|375636_377400_-\|pyruvate-oxidase	unknown	unknown	gnl\|CDD\|213733
NZ_CP018906.1\|WP_052127683.1\|369917_371513_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|173788
NZ_CP018906.1\|WP_052127685.1\|371865_374748_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP018906.1\|WP_035165995.1\|399538_400705_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|225371
NZ_CP018906.1\|WP_035165993.1\|398746_399439_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|225232
NZ_CP018906.1\|WP_052127679.1\|366061_366997_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|367527
NZ_CP018906.1\|WP_052127689.1\|397054_397630_-\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP018906.1\|WP_035165987.1\|392579_394673_-\|fibro-slime-domain-containing-protein	unknown	unknown	gnl\|CDD\|162730

Protein	Function_ID	Function_description	E-value
NZ_CP018906.1\|WP_191982080.1\|369644_369860_-\|hypothetical-protein	gnl\|CDD\|173788	cd04056, Peptidases_S53, Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.	3.38214e-06
NZ_CP018906.1\|WP_035165982.1\|387787_389059_-\|KxYKxGKxW-signal-peptide-domain-containing-protein	gnl\|CDD\|274741	TIGR03715, cell_surface_protein_precursor, KxYKxGKxW signal peptide. This model describes a novel form of signal peptide that occurs as an N-terminal domain with a recognizable motif, reminiscent of the YSIRK and PEP-CTERM forms of signal peptide. This domain tends to occur on long, low-complexity (usually Serine-rich and heavily glycosylated) proteins of the Firmicutes, and (as with YSIRK) the majority of these proteins have the LPXTG cell wall-anchoring motif at the C-terminus.	5.3599e-11
NZ_CP018906.1\|WP_052127692.1\|398091_398613_-\|stage-II-sporulation-protein-M	gnl\|CDD\|376676	pfam01944, SpoIIM, Stage II sporulation protein M. SpoIIM is on e of four stage II sporulation proteins that is necessary for the forespore inside the mother-cell to be properly internalized through the breakdown of peptidoglycans trapped between the membranes of the septum separating the forespore and the mother-cell. The four proteins working in sequence are SpoIIB, pfam05036, SpoIIM, SpoIIP, pfam07454, and finally SpoIID, pfam08486. D, M and P are in a complex with each other and the complex assembles in a hierarchical manner such that M, which serves as a membrane anchor, recruits P to the septum and P, in turn, recruits D to the septum.	7.28822e-11
NZ_CP018906.1\|WP_035165978.1\|374949_375333_+\|DUF805-domain-containing-protein	gnl\|CDD\|377540	pfam05656, DUF805, Protein of unknown function (DUF805). This family consists of several bacterial proteins of unknown function.	1.06652e-20
NZ_CP018906.1\|WP_035165997.1\|401296_403885_-\|ABC-transporter-permease	gnl\|CDD\|223650	COG0577, SalY, ABC-type antimicrobial peptide transport system, permease component [Defense mechanisms].	2.10798e-11
NZ_CP018906.1\|WP_052127689.1\|397054_397630_-\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	2.08021e-09
NZ_CP018906.1\|WP_052127677.1\|365440_366022_+\|hypothetical-protein	gnl\|CDD\|180584	PRK06481, PRK06481, flavocytochrome c.	7.54393e-05
NZ_CP018906.1\|WP_035165993.1\|398746_399439_-\|GTP-pyrophosphokinase	gnl\|CDD\|225232	COG2357, COG2357, PpGpp synthetase catalytic domain [General function prediction only].	1.14867e-63
NZ_CP018906.1\|WP_191982081.1\|394741_395935_-\|KxYKxGKxW-signal-peptide-domain-containing-protein	gnl\|CDD\|236138	PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated.	4.81662e-07
NZ_CP018906.1\|WP_035165991.1\|396250_396988_-\|glycosyltransferase-family-2-protein	gnl\|CDD\|366154	pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.	1.31987e-38
NZ_CP018906.1\|WP_035165980.1\|375636_377400_-\|pyruvate-oxidase	gnl\|CDD\|213733	TIGR02720, Pyruvate_oxidase, pyruvate oxidase. Members of this family are examples of pyruvate oxidase (EC 1.2.3.3), an enzyme with FAD and TPP as cofactors that catalyzes the reaction pyruvate + phosphate + O2 + H2O = acetyl phosphate + CO2 + H2O2. It should not be confused with pyruvate dehydrogenase [cytochrome] (EC 1.2.2.2) as in E. coli PoxB, although the E. coli enzyme is closely homologous and has pyruvate oxidase as an alternate name. [Energy metabolism, Aerobic].	0
NZ_CP018906.1\|WP_052127683.1\|369917_371513_-\|hypothetical-protein	gnl\|CDD\|173788	cd04056, Peptidases_S53, Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.	3.49809e-40
NZ_CP018906.1\|WP_035165984.1\|391032_392502_+\|glycosyltransferase	gnl\|CDD\|223515	COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane].	7.46945e-10
NZ_CP018906.1\|WP_035165995.1\|399538_400705_+\|MFS-transporter	gnl\|CDD\|225371	COG2814, AraJ, Arabinose efflux permease [Carbohydrate transport and metabolism].	2.2977e-73
NZ_CP018906.1\|WP_052127679.1\|366061_366997_-\|hypothetical-protein	gnl\|CDD\|367527	pfam03496, ADPrib_exo_Tox, ADP-ribosyltransferase exoenzyme. This is a family of bacterial and viral bi-glutamic acid ADP-ribosyltransferases, where, in Aeromonas salmonicida AexT, E403 is the catalytic residue and E401 contributes to the transfer of ADP-ribose to the target protein. In clostridial species it is actin that is being ADP-ribosylated; this result is lethal and dermonecrotic in infected mammals.	9.8188e-31
NZ_CP018906.1\|WP_035165987.1\|392579_394673_-\|fibro-slime-domain-containing-protein	gnl\|CDD\|162730	TIGR02148, ORFveg106_random, fibro-slime domain. This model represents a conserved region of about 90 amino acids, shared in at least 4 distinct large putative proteins from the slime mold Dictyostelium discoideum and 10 proteins from the rumen bacterium Fibrobacter succinogenes, and in no other species so far. We propose here the name fibro-slime domain.	3.10743e-13

>NZ_CP018906.1|WP_035165980.1|375636_377400_-|pyruvate-oxidase
MANTIDSGVAMIKTLESWGVDHIYGLPGGSINNVMYALREEQSKGNIKYIHVRHEEVGGLAAVDDGRVTGKIGVAFGSAGPGATHLFQGAYDAMMDRVPTLFLVGQVPHNFMNADFFQEQDESQLFSDAAVYNRTVTTAESLPKVVDEAIRQAYAKHGPAVVVIPNDLAHEQIPADGYYSSAANFEKAEAPEPKGEKVEEALKLIKEAKKPVIYMGQGVRGAADDMMELSRKLQMPIIYAALAKDVIPYEFPALLGSGMRVASKPANEALKETDLMLFVGSNFPFSEILFNPNAKFIQIDSNPAMLGKRHKTDVSMYADAKKALKKFLEMSEQLPESPWYQANIDNANNWREYNEHMMNKTDGDLRFEPVFKEINRIAKDDALFSIDVGDVTQNAVRLIKNSGKERWFTSGLFATMGAGLPGALAAKLSHPDKQVFSLAGDGAQTMVMQDLITEKLYNLPIINVVFKNYELGFIVDEQEDEGEERFGVSLGGIDFAQVAEAQGVHGIHVTKVEELPKAFDEALEMTEHQNEPVLIDVQITGERPIPVEKLELDPAENSPEAIAQFKKRYYAEDLKPFSEFLANHGVK
>NZ_CP018906.1|WP_035165978.1|374949_375333_+|DUF805-domain-containing-protein
MQAYKEFWTKMFVFNAKATRKQYWISIIINAIVVGLVSLVTGDYKYVGTETTQAFTEHNYSLVFSIFLLLVWIAEFTIRARRLHDSGHSNWWILLYMIPLIGWIWLFILLVMPSKDDNRWPDNQSEV
>NZ_CP018906.1|WP_052127685.1|371865_374748_-|hypothetical-protein
MKRWIKQIAPALMIILGVLLAISCSAKADDQVKMDYTGSSEVNSAKSMPFTFTIPQGLAKTDSQIILHIDKDAVEPGTDSIKFTDTDTNVVSMDPIDDNGNVVITLGKGVESLIEYPLKVSLLIKPSSQVGLDKGKPYKANVTAKFVSKDGNAIALNSGNPFTININNYAGGDSGDANFSVVNFGMDRNNPLKFPDDFKDSAGNKYIPNYYAQNGDQYQFDYTGNYMTGYTQVQFPKLAAGESLNDVKLNVDTSRSIYPKSIKLFDYTNTAVPTDYYKVVTTDTGFTIDFSGWPKDKPINGLSAIYAVKTQSANDKVKVTSSATITTSLDRTLKQDGNSAAFAFINNSNGEFIPSLVLKPDGYTISQGQNYVPNWSDFVIKAFDPDHPKHFNPDEGTYNITIDGDSSSGNKTTYTDGTNTITVNGDISKPGKYPVDIVFTNNKTNISSRVYTSTLTVVPKKVNDVKVTLIPYDEATNEPITGASVTKVGQPGNEIAIPEIDGWTFDTKNSKNPSNPFVIPDKDAKIPVYYKKNQPTSVSAILIPCDKTTGKKIPNVESTSITAVPGSKIEVPTLAGWTPVNAVPSTMPANGGDIKVYYQPNLPDQPNNVTVTIIPCDRATNKPIPNVSPIKMNAEPGEKVAMPEITGYNPESTSPITIPAGGGTIKEYYTKKSSTNGGGTTPTNGGSTPTTNNSSTSPTANNGSSSSQSTSSTSTQPVSPQPSNPQASGSLVATKGEAVYSLKPIYLYESKNFNSHERLAKYTKKPRVNRPMFVVIRYARDANGRLRYFVRDVNHLSKTDGKTGYITANTSYVRPVYYRSLHKVITVINPNGVNSYRTKKLTGFVKHYRQGTILKVSRIVTHNLTTRYVLTNGKIVTANRKLVKSGKTSFPKNITVKKGIKLYSTLNSKSSKQHIKAGKKLQVKKVVYTVPSSVTQSGTKRYQVAGGYVTANSKYVKITK
>NZ_CP018906.1|WP_035165977.1|371657_371843_-|hypothetical-protein
MTKQKLQLIALILIGVSILLKILGGLNFLAPVAGIVNFIALITALVAVVLAFWLITRNAKH
>NZ_CP018906.1|WP_052127683.1|369917_371513_-|hypothetical-protein
MKKLGIILGVMAFSGIVGSQVVANAAKKNDKSTFMISLNPKNKAALEDFVYDTVDPASPSYHQYLTPSQFATRFGQSDSVINEFKSHFKKYKVTVKPNAGNLSLKVSGSYNNVVKALKAKPTNQNSAKYYTMYTLPKTLQDKTQAIIGFGVENNYQKKAAKKQAKTKFASDIQVKADTPNLKLSKADFSDKYAAKKFTSRYGVDKLYSQGLTGKGQSVGLITLSDFHTQDIKTYLNKMGGNTDTNRIKRYYTSSSAKYVSGKITKPFKKVNEAYMAQVEATLDVQQAASVAPNSRINVYIGTGNGNQTQSDYDYYNAFVQAISANRDKTLSTSFNVFNEVADKTYGLTENAKQYNDALNLAFQQAAAQGITMFNAAGDNGARDKSNPKLNLSISMSPYLVEVGGTTLPFTKKIDGRTVTVKQEQGWGNIKQIAKADVKEQSFSAGGGGFSQLNALPRYQQGVSGVGTFRAVDYIKYDKQGKGIINPSPRVIYGTSRGRNVPDVSANSDPMTGYAMYVTNGTPGQKGVKAGK
>NZ_CP018906.1|WP_191982080.1|369644_369860_-|hypothetical-protein
MNEGMNGSSIGFWGPQIYKFAQQPLSPFTPLDSTSNNNLYYTGQPGKLYNQATGLGTVDFNQLFSDFKAGK
>NZ_CP018906.1|WP_052127679.1|366061_366997_-|hypothetical-protein
MKTKVGILIATFTLCLPLMADTSLAAKTKPKKLPTQTYVTSKYHDETPNQFVLKYATTAYSLAGGEPSFTQRTVVPKNSRITVLQKSGKGAIISAQGFSSLMYVKNISGLTYSTKTYKVSKTALAKLNKQTKAWAKQLSKAERKSIDYYSGTGYTKLNNYLRYGDGNKTVAKNANLLTSALQQYNLKTPMTVYRGVSTSGLRKSLNGEKLRVGALYDDPGFSSTSISRYTALGFGSKLLLKIQLPKGNTGAYIDPVSYNVGEKEFLINPGANMIVTKVQTVTYTVKEKTKGHQAKTSLKDKYKLISVSMQR
>NZ_CP018906.1|WP_052127677.1|365440_366022_+|hypothetical-protein
MKLKATLLTLLLLIGIGLAGCSSNSEKTSSSSSDNKVEKQSDTSNKSSDSQSSAVKDDDDNDDQDDNDSNTSATSSNSSSKAKVRYRTVKFQAQLDDVDDSRLYQSVPLSRRTKTASWNSVDAHEGKRVYVDKKAIVLTRDRDDHDDDDDYDDNDNDDNGYDSEEYYRIRFSASNSAKKYWVEEDVVDTDNDD
>NZ_CP018906.1|WP_052127675.1|364795_365299_+|hypothetical-protein
MKLKAILLTLMLFVGIGLAGCSSHAEKSTNQDNKVENHAKVNDKAKISTEDQPVAHDDHNQTMALSSSKAKVKYKTVKFRAQLDDLDDSKLYKYVPGTRKNKTYSWKKVKAYEGKRIYVDKKATVYTRDRDDDDDDYDSEEYYRIRFSASNKATKYWVEEDVVDDDD
>NZ_CP018906.1|WP_035165975.1|364275_364680_+|hypothetical-protein
MKKHILLGALALSTFGVMFASPTSANAATWHKGVPSILKSGVWKVAGVKEYWAFNNKGVYDIDGKYVYETNKPLYTKSGNKYTIKSNYSKTKNLKYVYCTLTKINKNKFKFVMPHTSKDKVVYYTTLTRTYKIK
>NZ_CP018906.1|WP_035165982.1|387787_389059_-|KxYKxGKxW-signal-peptide-domain-containing-protein
MSKRNKELKDQISSEKLHYKMYKSGKQWLFAAITIVAFGGGVALADNQQVKAATPVYGESSSTSSKTSIPVDSSSANKSVVVYNGGSSSSSSSKASSSSSSTSKAPIAVYGQATTDSSSSSSSVNRSSANSSSNQTSQVPVYSGDRSSSTSTSSSDDTPSQATVGSSSQDSSSTSSTSSNTVVSGNGSTEKSSSSVDNGGADQASSSSNKEQTQDNDRRQADNDDQVTTASSSVKNNDDNEFLARNDNDANANNSNENDSNPDNAANDSQLSAAPESNASFNDPAREAIAAASGAVSAASSIAAINSDSSSAQGRRAMLMFANEFVQTTSLTNSDVNDQNEVSDDTDDNDLELLSDDSEDLASTDEVAPQSAQVVAFAATSADLEDEDVELLADASAEADVWTQFSNTLADAKSRKSADYTTQ
>NZ_CP018906.1|WP_035165984.1|391032_392502_+|glycosyltransferase
MEYLILDTVSDAKFEQNNTLKQQISILKQAGSDFKVLTRDYNRYQAKHLKELGIAEDKVVNMFDFFQNAVNIPHAQPTIHDLPQIPAEAYEIQPHGSNFNELRDGGKLLAHQQVMPETFGQVDYIRYYDQYGNYSTIEYYDVRGFKTMEQYFHPNGQVAYEFWYKPSGERVVEAIYMFGPDKKEVINTSWHVNDFKGDSYELDNIDQLFSLFLNEQIADDDQARLINDTPDSIHLLSSDLIGNPEIYLKLSQVNDRDAIKKYLEITPAAKLLVDTDDQAAIIEPLGAPVFVDPEYGLTNTELLRSYADITKRLPENVIAFTDLRSSEEINTLINAWRIVHEANDTATLTIVGSPIGATNLTPIFNKLKELNLFELVSIQLDAKKVPEVYDRSTLMLLPSTMYGTTSNVAEAALRSIQTVVVDDNELAAWVASIGAGSTVEKDAVNLADAIINLVKNPETLIKASQAAHSATNQLSLENSVAKWEAVLNN
>NZ_CP018906.1|WP_035165987.1|392579_394673_-|fibro-slime-domain-containing-protein
MATILEYIEYKYSNINESIPDGYSVKNFYERDDKLYEYSDGSFKEVNDKQLLKFFKDVKNKGYVTSGYLNDDSQEIDEKDLLAKAIEAGQDYVQIGNKIYHIDYTSDPDDIHDKGIIYSITVPKVMPKTDLKNSGEDNKTLKELESINPGVKISLFDYWLKDDGTEKGGNVNDLGINNGKYLKFSAERAGLTNPNPNNVYKDYAISQEIVRDYLDENGYPIYKSLIDQSLAYLFDDSQVEGKKVVFKDQDGENLFVSDGNGGFSYDSKKNHAYLDENGDIKLFNWNNMPGAKTGKPERFGQFFPLDRLDEFFEFQNGVGVKTKQYKTGSVNSNAENGLNHYFGMTMEMGYIHPKDGEVESVKDGAKVKTPMKFEFSGDDDFWLFIDNKLALDIGGIHDAASGSIDFSTGVVTAQVKTGQPEAVVGQIVSSETETVPKNVKKIVIPNWNKADSEHQIKLFYLERGHEESNLKMNFNLQIPQHNYAENNAFAVDDKNPSKKVAYAVGSTYSERETTRHTYGTYTELGIRETNTGGGSNPGVVPPNPGTPGTPGTPSTPGDSGDLERPEGLPESGGTSNGSIGGSTGNLSGTTNSGSSQQVSAVDLATGSGNQDGNLHMVDLTSDGSESSDQIVSESDQTGHSAPGVADQPDKVSTSQTNQVGTLPQTGEGDEHASTIGAALLAGLSVLTFGVYRRKRKQ
>NZ_CP018906.1|WP_191982081.1|394741_395935_-|KxYKxGKxW-signal-peptide-domain-containing-protein
MKEKLKNTNKTVRYRLYKAGKLWVIGGSCVIGMGILGCSSALAESSTETAKTSSSVPVYTPANPDPKPAKPVAPKQTTKSPATVVKQQPAAQQATTATKPAANPVQSYQSAPQQNTQPKSSQSVAKPAVTQSQPRSQVKPQVSQAETAPQTQVDNQQVTQGQETKSQAAKASPTAEVEKPATQNSTVKKQTSQMKAQSPVAAKASTKADKEVIDPNEVKEENTSEYKRKFYEVMEDGKQVFYEQINDSFVKITDQEFLDQIQETIDKKIAKRHYLTKEQLKELPAGTEFSGDYRIYHFIDKVPEGFEGDTIEGKVMEFTKPGEDGANPVYVVKRKVNGEIRYFKKVDGQFTEDVTEKVKSIINTEKLVDRYLKAVNDGGLTEEEIKDKLEKQSKVAI
>NZ_CP018906.1|WP_035165991.1|396250_396988_-|glycosyltransferase-family-2-protein
MNDSILMTVVVPTHNLENYVGKTLDSLANQQYRNFEVIVVDDASTDKTVAVAERYVKLDPRFRVVKLTKHSGVSKARNAGIDDAKVEAITFVDGDDLVEPDFLQVMADGMAEPKVDMVTVGYRWGFRGAGALEHRGLVSVSKREVYDSINTRGNLIGGYVWNKAFRVSVLREKQIRFDETLDLAEDLLFTADYVYATNNFLLDAKPLYEKVSRPGSTIHSASFKQREREYEVRQHIDDMGAKIPS
>NZ_CP018906.1|WP_052127689.1|397054_397630_-|TetR/AcrR-family-transcriptional-regulator
MNDNDKRVMKTKQSIREAFFKQLAEKGIERMTVKAILDDAGLNRTTFYAYYTDKYDLLEKTQEGIMNQIIRIKRDNPVGGGKNLDKTEQYVRSYFLALFKYIQANHQVLQLLFANQNQIAFLKDVTHGRPEFYNHWRPVVSQVPGIDPRNSYAALVGVVINFFFEGERDHFKENPAKIAGVLADIVLRYLR
>NZ_CP018906.1|WP_052127692.1|398091_398613_-|stage-II-sporulation-protein-M
MVATWIISFAIVKLTGSTEAIRSFLKASIGSENTLKGGSFLPLFMHNFTGSVMIIILGLIPIPLYYAFIVYNAATVGLVLTLTAHPIAMFMAGILPHGILEIPAQIISAAISAKVVWFVFDKYIRHRDRPETFGLIIKNAVIDTLVFVLPLLFVAAIIEFSITPGLIHTFVGK
>NZ_CP018906.1|WP_035165993.1|398746_399439_-|GTP-pyrophosphokinase
MIIERENHFNIKKIERQFKAANLEKELHGIKQVSQEYLLRHSALNEIGTKLENLDDEYSVSFDHNPIHHMEERMKEPTSLIEKVARKGMELTLENVFENIYDIAGIRVITNYIDDIYQVRDALAKQSDITVIKEKDYIKNPKPNDYRSYHLIVSVPVFQDEGPKNVAVEIQFRTIGMDMWASLEHDLRYKSFADDNKADQYASRLKKYSDQLYEIEANMQQIFNGLQETE
>NZ_CP018906.1|WP_035165995.1|399538_400705_+|MFS-transporter
MKKFGTRSFILVAIGFILGMSEFIMVGILNDLSASFHVGISDVGFLVTLFAIVYAIATPILTILVGSHRLYRVMILLLGIFIAANALTAIAPNYTILTLSRILTAIVSGITVSIAITFSAVIAPREKRAWLVSWVFSGFSIASVFGVPIGTWLSDKFGWRIVFWLIVVISILFTILFMLSLPTDIRQGKMDHFTQQFAIFKDKRILLGILLPTLNLGGVYVVYTYLRPIIVSGLGFPTAFVTPILFVYGFASLASNQISGRLANYDGLKTMTKVYLLQIVTLVALPLLFGLPWIALISLIILGFTMYLQNSPMQMFYLEVAETDYPQSMVMSSSLNSIFSNVGIAVGSATGGLMVNATGLKSLGIGGAIYTIAALAVLVVLNKVRKVR
>NZ_CP018906.1|WP_035165997.1|401296_403885_-|ABC-transporter-permease
MNKLLLRNIKDSFGRFIAIAMIIMLGVLIFVGVKATGPALNDSLQAEVNSQKLSDVQIISTKGFTAKDVAAAEKVSGAKAETSKYKAVIGGKNRDAIALYGYDKQDKQNLPKIKSGRLPKANNEILLDSKAKTDEGYKLGDTFKFAKSADLTRRTFKVVGFADSAQYVDNATRGAANIGNGQVQYFAYVPKKMMNLPVATALNVRFSSLQDKGTFGSKYKDAVKDKVKQLKRVLNARKVDRAAELAKPATKKLTSAQSKLDAAKRQLATAAKAAPTNSRVKIQQKQLAKQQAKLDQQKKKVKDATTPTYIWSTREDFPGFSGYGESSDRIAAIANVFPLFFFLLAALITFTTVTRMVEESRSQIGTLKALGFSKGSIAYQYIMYALLAAVVGIVFGSVLGNELLPRLVISMYQNYVLGGAVVHFDWTSIGFAMVLALISTVGAAIIVINREVKVVPSELMRPKAPKSSKKIWLEKVTFIWSKLKFNQKISYRNLFRFKSRGIMTILGIAGGTALILTGFGLDNSISSSGQRQYNDLIHYDAVVQSKTTDKLPEVQKTVKDAGNYKQSTVVSTGAAKVSKGDKSVADITVYSPKNEDQFSKYIKVKDVDSKKQLSLPNDGIVLTEKAAKILGVKKGDKISVTGQNNHKIQVKVAAIAENYVSNFMYIKRQNYQNVMGKQPSMKTLLVQLKKTNKSAETKLGKQWISKNTNILGINFTTDQKKTVTNMSSQMGPIVWIFILLSGLLSFIVLYNLNNINISERQRELSTIKVLGFFDPEVTMYVARETIILAIVGIVGGYGLGNLLTMYVLHQAETNAVIFPLVIKPLGYVVATVLMIVFNLVVIAITHRHLKNVDMVEALKSNE

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP018906_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018906_3

863616-863759

Orphan

Consensus_repeat	Method
GTTACAGAAATCTTTGATTTCGTTTTAACGCCCCCACAACGA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018906_3

>merge|NZ_CP018906|3|863616-863759|CRISPRCasFinder
GTTACAGAAATCTTTGATTTCGTTTTAACGCCCCCACAACGATGACACAAACTGAGCGCTGCGAATAGCGGCGGTCAGTCGTGACAGAGACTGTGAAGAGCTGTTACAGAAATCTTTGATTTCGTCTTAACGCCCCCACAACGA

>NZ_CP018906|3|3|863616-863759|CRISPRCasFinder
GTTACAGAAATCTTTGATTTCGTTTTAACGCCCCCACAACGA	TGACACAAACTGAGCGCTGCGAATAGCGGCGGTCAGTCGTGACAGAGACTGTGAAGAGCT
GTTACAGAAATCTTTGATTTCGTCTTAACGCCCCCACAACGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018906.1\|WP_035166565.1\|870062_871073_+\|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl\|CDD\|181535
NZ_CP018906.1\|WP_035166550.1\|856874_857234_+\|ribonuclease-P-protein-component	unknown	unknown	gnl\|CDD\|234782
NZ_CP018906.1\|WP_191982097.1\|857284_858073_+\|membrane-protein-insertase-YidC	unknown	unknown	gnl\|CDD\|179508
NZ_CP018906.1\|WP_035166569.1\|872625_874005_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	unknown	unknown	gnl\|CDD\|283235
NZ_CP018906.1\|WP_035166567.1\|871072_872158_+\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|234565
NZ_CP018906.1\|WP_035166545.1\|853509_854649_-\|DNA-polymerase-III-subunit-beta	unknown	unknown	gnl\|CDD\|235541
NZ_CP018906.1\|WP_035166560.1\|865884_866526_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|225140
NZ_CP018906.1\|WP_035166548.1\|856685_856820_+\|50S-ribosomal-protein-L34	unknown	unknown	gnl\|CDD\|366117
NZ_CP018906.1\|WP_191982088.1\|853036_853267_-\|S4-domain-containing-protein-YaaA	unknown	unknown	gnl\|CDD\|274378
NZ_CP018906.1\|WP_035166557.1\|860225_861620_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	unknown	unknown	gnl\|CDD\|235392
NZ_CP018906.1\|WP_035166556.1\|859311_860058_+\|protein-jag	unknown	unknown	gnl\|CDD\|224760
NZ_CP018906.1\|WP_078256912.1\|866545_867190_-\|histidine-phosphatase-family-protein	unknown	unknown	gnl\|CDD\|366010
NZ_CP018906.1\|WP_035166559.1\|863830_865027_-\|multidrug-effflux-MFS-transporter	unknown	unknown	gnl\|CDD\|340878
NZ_CP018906.1\|WP_035166554.1\|858151_859105_-\|cation-transporter	unknown	unknown	gnl\|CDD\|223131
NZ_CP018906.1\|WP_035166563.1\|867831_869307_-\|anthranilate-synthase-component-I-family-protein	unknown	unknown	gnl\|CDD\|223225
NZ_CP018906.1\|WP_035166558.1\|861653_863594_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	unknown	unknown	gnl\|CDD\|235362
NZ_CP018906.1\|WP_035166570.1\|874027_875233_+\|cation:proton-antiporter	unknown	unknown	gnl\|CDD\|223551
NZ_CP018906.1\|WP_035166546.1\|854838_856182_-\|chromosomal-replication-initiator-protein-DnaA	unknown	unknown	gnl\|CDD\|273037
NZ_CP018906.1\|WP_052127742.1\|865191_865812_+\|signal-peptidase-I	unknown	unknown	gnl\|CDD\|274044
NZ_CP018906.1\|WP_035166562.1\|867251_867848_-\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|235552

Protein	Function_ID	Function_description	E-value
NZ_CP018906.1\|WP_035166565.1\|870062_871073_+\|3-deoxy-7-phosphoheptulonate-synthase	gnl\|CDD\|181535	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed.	2.91189e-157
NZ_CP018906.1\|WP_035166550.1\|856874_857234_+\|ribonuclease-P-protein-component	gnl\|CDD\|234782	PRK00499, rnpA, ribonuclease P; Reviewed.	1.57937e-56
NZ_CP018906.1\|WP_191982097.1\|857284_858073_+\|membrane-protein-insertase-YidC	gnl\|CDD\|179508	PRK02944, PRK02944, YidC family membrane integrase SpoIIIJ.	5.37898e-86
NZ_CP018906.1\|WP_035166569.1\|872625_874005_+\|branched-chain-amino-acid-transport-system-II-carrier-protein	gnl\|CDD\|283235	pfam05525, Branch_AA_trans, Branched-chain amino acid transport protein. This family consists of several bacterial branched-chain amino acid transport proteins which are responsible for the transport of leucine, isoleucine and valine via proton motive force.	9.57131e-136
NZ_CP018906.1\|WP_035166567.1\|871072_872158_+\|3-dehydroquinate-synthase	gnl\|CDD\|234565	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed.	4.82726e-152
NZ_CP018906.1\|WP_035166545.1\|853509_854649_-\|DNA-polymerase-III-subunit-beta	gnl\|CDD\|235541	PRK05643, PRK05643, DNA polymerase III subunit beta; Validated.	3.29162e-140
NZ_CP018906.1\|WP_035166560.1\|865884_866526_+\|hypothetical-protein	gnl\|CDD\|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	2.69032e-63
NZ_CP018906.1\|WP_035166548.1\|856685_856820_+\|50S-ribosomal-protein-L34	gnl\|CDD\|366117	pfam00468, Ribosomal_L34, Ribosomal protein L34.	2.62167e-09
NZ_CP018906.1\|WP_191982088.1\|853036_853267_-\|S4-domain-containing-protein-YaaA	gnl\|CDD\|274378	TIGR02988, YaaA_near_RecF, S4 domain protein YaaA. This small protein has a single S4 domain (pfam01479), as do bacterial ribosomal protein S4, some pseudouridine synthases, tyrosyl-tRNA synthetases. The S4 domain may bind RNA. Members of this protein family are found almost exclusively in the Firmicutes, and almost invariably just a few nucleotides upstream of the gene for the DNA replication and repair protein RecF. The few members of this family that are not near recF are found instead near dnaA and/or dnaN, the usual neighbors of recF, near the origin of replication. The conserved location suggests a possible role in replication in the Firmicutes lineage. [DNA metabolism, DNA replication, recombination, and repair].	2.18024e-29
NZ_CP018906.1\|WP_035166557.1\|860225_861620_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE	gnl\|CDD\|235392	PRK05291, trmE, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE.	0
NZ_CP018906.1\|WP_035166556.1\|859311_860058_+\|protein-jag	gnl\|CDD\|224760	COG1847, Jag, Predicted RNA-binding protein [General function prediction only].	6.67345e-56
NZ_CP018906.1\|WP_078256912.1\|866545_867190_-\|histidine-phosphatase-family-protein	gnl\|CDD\|366010	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1). The histidine phosphatase superfamily is so named because catalysis centers on a conserved His residue that is transiently phosphorylated during the catalytic cycle. Other conserved residues contribute to a 'phosphate pocket' and interact with the phospho group of substrate before, during and after its transfer to the His residue. Structure and sequence analyses show that different families contribute different additional residues to the 'phosphate pocket' and, more surprisingly, differ in the position, in sequence and in three dimensions, of a catalytically essential acidic residue. The superfamily may be divided into two main branches. The larger branch 1 contains a wide variety of catalytic functions, the best known being fructose 2,6-bisphosphatase (found in a bifunctional protein with 2-phosphofructokinase) and cofactor-dependent phosphoglycerate mutase. The latter is an unusual example of a mutase activity in the superfamily: the vast majority of members appear to be phosphatases. The bacterial regulatory protein phosphatase SixA is also in branch 1 and has a minimal, and possible ancestral-like structure, lacking the large domain insertions that contribute to binding of small molecules in branch 1 members.	7.25534e-39
NZ_CP018906.1\|WP_035166559.1\|863830_865027_-\|multidrug-effflux-MFS-transporter	gnl\|CDD\|340878	cd17320, MFS_MdfA_MDR_like, Multidrug transporter MdfA and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily. This family is composed of bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as MdfA (also called chloramphenicol resistance pump Cmr), EmrD, MdtM, MdtL, bicyclomycin resistance protein (also called sulfonamide resistance protein), and the uncharacterized inner membrane transport protein YdhC. EmrD is a proton-dependent secondary transporter, first identified as an efflux pump for uncouplers of oxidative phosphorylation. It expels a range of drug molecules and amphipathic compounds across the inner membrane of E. coli. Similarly, MdfA is a secondary multidrug transporter that exports a broad spectrum of structurally and electrically dissimilar toxic compounds. These MDR transporters are drug/H+ antiporters (DHA) belonging to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.67416e-83
NZ_CP018906.1\|WP_035166554.1\|858151_859105_-\|cation-transporter	gnl\|CDD\|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	3.86119e-62
NZ_CP018906.1\|WP_035166563.1\|867831_869307_-\|anthranilate-synthase-component-I-family-protein	gnl\|CDD\|223225	COG0147, TrpE, Anthranilate/para-aminobenzoate synthases component I [Amino acid transport and metabolism / Coenzyme metabolism].	1.06099e-132
NZ_CP018906.1\|WP_035166558.1\|861653_863594_+\|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG	gnl\|CDD\|235362	PRK05192, PRK05192, tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG.	0
NZ_CP018906.1\|WP_035166570.1\|874027_875233_+\|cation:proton-antiporter	gnl\|CDD\|223551	COG0475, KefB, Kef-type K+ transport systems, membrane components [Inorganic ion transport and metabolism].	2.1602e-59
NZ_CP018906.1\|WP_035166546.1\|854838_856182_-\|chromosomal-replication-initiator-protein-DnaA	gnl\|CDD\|273037	TIGR00362, DnaA, chromosomal replication initiator protein DnaA. DnaA is involved in DNA biosynthesis; initiation of chromosome replication and can also be transcription regulator. The C-terminal of the family hits the pfam bacterial DnaA (bac_dnaA) domain family. For a review, see Kaguni (2006). [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP018906.1\|WP_052127742.1\|865191_865812_+\|signal-peptidase-I	gnl\|CDD\|274044	TIGR02227, Inactive_signal_peptidase_IA., signal peptidase I, bacterial type. This model represents signal peptidase I from most bacteria. Eukaryotic sequences are likely organellar. Several bacteria have multiple paralogs, but these represent isozymes of signal peptidase I. Virtually all known bacteria may be presumed to A related model finds a simlar protein in many archaea and a few bacteria, as well as a microsomal (endoplasmic reticulum) protein in eukaryotes. [Protein fate, Protein and peptide secretion and trafficking].	7.77336e-37
NZ_CP018906.1\|WP_035166562.1\|867251_867848_-\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	2.60414e-88

>NZ_CP018906.1|WP_035166558.1|861653_863594_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-enzyme-MnmG
MESLRVSDVKQSYRGEDYDVIVVGAGHAGCEAALAAARMGNRTLLMTINLDMVAFMPCNPSIGGPAKGIVVREVDALGGEMGHNIDKTYVQMRMLNTGKGPAVQALRAQADKHAYHAEMKDTLENEPNLTLRQGIVDDLIVEDGECRGVITNTGAKYSAKAVVIAAGTAARGKIIIGELMYASGPNNSQPAEKLTANLEKLGFDLERFKTGTPPRVDGTTIDYGKTEEQPGDEQPNHFSYETPDSEYIDVKNQLSCWLTYTNEKTHEIIKENLDRAPMFTGVIEGVGPRYCPSIEDKIVRFADKSRHQLFLEPEGRKTEEWYVQGLSTSMPEEVQQKIVHSIAGLENAQMMRPGYAIEYDVVAPYQLKPTLETKLLKNLYTAGQTNGTSGYEEAAGQGIIAGINAGRRALGKEPFVLKRNEAYIGVMIDDLVTKGTKEPYRLLTSRAEYRLLLRNDNADMRLTEKGHELGLISEDRYENFLAKKSAVESELDRLNSIRIKPSDKVNEFVQAHGDKPLQDGVLAAVFLRRPYVDYKTLMQFIDAPEVSLDHRVVEQVEIRTKYAGYIAKAEANVDKMKRMEEKHIPDRIDYAAIDGIATEARQKLAKIQPQTIAQASRISGVNPSDIAILSVYIQQGKIAKIDAQGA
>NZ_CP018906.1|WP_035166557.1|860225_861620_+|tRNA-uridine-5-carboxymethylaminomethyl(34)-synthesis-GTPase-MnmE
MVLTTTELDTIAAISTPPGEGGISIIRVSGEEALNVAEKLYRGKDISKVASNTINYGHIIDPESGEEVDEVMLSVMKAPRTYTMEDIIEINCHGGIVATNRILQLVLSNGARMAEPGEFTKRAFLNGRIDLSQSEAVMDLIEAKTDQSMKAAISQLDGNLSHLIRNLRQDILDVLAQVEVNIDYPEYDDVETMTSRLLRDKAVDVHARIDQLLKTAKQGKILRDGLATSIIGRPNVGKSSLLNHLLHEDKAIVTDIPGTTRDVLEEYVNVRGVPLKLIDTAGIRDTEDKVEKIGVDRSRKAIDSADLVLLVINASEPLTGEDRELIEKTSGKQRIVVLNKTDLPIKLDLEELKRLTGGKNMISTSAIEANGLQELEELIAKMFFEEGIENSQNNVMVTNARHIGLLNQANQSLNSVINGLDQGMPVDLVQIDMTHCWDLLGEITGDSYQDELIDQLFTQFCLGK
>NZ_CP018906.1|WP_035166556.1|859311_860058_+|protein-jag
MTTYSGKTIEEAIANGLKDLSLTRDQASVAVKVQPRNGFFGIGRKLAQVEITKKEEPKTEENNQASVKIVNQTFTVAGFDQAPTEDEDSEEQNEEKLQDIVTDLSTYLNDVIDAMGFEHTLSTDLKNHHSLYVNIDTAEEKQSLLIGRHGRTINAMQGLAQIYVNRLGANNLNVVLDIANYRARRSEALAQLAEKTARNAIANGKPVYLNPMPAFERKEIHNVLADNDHVITYSTGREPHRVIVVAPK
>NZ_CP018906.1|WP_035166554.1|858151_859105_-|cation-transporter
MSNSGQYDAGRNVLLDWNKRIKKLYQAQKITYINLFTYSAIMTAELIIGYMTHLTVLIADGLNNLTGVCGALILIFGLHMAVKPPDKSHVLGHWQFENVAALLSAAIMFAVSIQIFISGFESLQRYFAGETINPNLWSLGISLISGVLITGLALINSHQGFKLNNTALTASGKDLQSDAITSFGTFLSICGAYLGLKWLDGIATLIVGGFILHASITIFRTTIMKLTEGFDPQVIDKYSETVSNVDGVLGVQSIEPRYLGDQVVIQVGIYLADHTDLNTSYVIGERVENALMETYDILDADVKAYPLSLKKKQDVAD
>NZ_CP018906.1|WP_191982097.1|857284_858073_+|membrane-protein-insertase-YidC
MTLILTACSNAPITSHSKGLWDGLVVLNFSRAIIWLSKFFSDNYGIGIIVFTIIVRIIILPLMIYQTRSMRKTQEIQPQLKALQQKYSSRDAETMQKLQAEQKKLYSEAGVNPVAGCLPLVVQMPIIFALYQAIWRTEILRSGSFMWLQLGHKDPYFILPILAAIFTFLSSWLAMKGQPESNSMTTMMTVGMPVVILITAINLPSALSLYWVVTNAFQVGQTLVIQNPWKIRREREAKENEEKERKRAIQRAMKKAKKSKRK
>NZ_CP018906.1|WP_035166550.1|856874_857234_+|ribonuclease-P-protein-component
MRKSYRVKKEADFQEVFETHNSVANRQFVVYSLDKPGQLHFRVGISVGKKIGNAVHRNWVKRRIRQSIFELKPDLRQDVDFIVIARPSTDQMAMKDVKSGLIHVLKLANLLDQDYDSEE
>NZ_CP018906.1|WP_035166548.1|856685_856820_+|50S-ribosomal-protein-L34
MKRTYQPKKRHRARVHGFRKRMSTSNGRKVLARRRQKGRKSLTA
>NZ_CP018906.1|WP_035166546.1|854838_856182_-|chromosomal-replication-initiator-protein-DnaA
MPDKEALWSELSEKFRANTPKLSFETWIEPVKPVNFDGSTLTLSLPSELHRDYWEKQLAPNLIEYAFVLTKGNIEPKFVLDSDVKASTDDKSDIPEAKKKPESYAFSKEGHLNPHYTFDTFIIGKGNQMAHAAALIVSEEPGKLYNPLFFYGGVGLGKTHLMQAIGNKLVADRPDAKVKYVTSEAFTNDFINAIQTNQTEEFRQEYRNVDILMVDDIQFFADKEATQEEFFHTFNDLYNDDKQIVLTSDRVPQEIPKLQDRLVSRFAWGLPVDITPPDLETRIAILQNKAEIDNLEIPSETINYIANQVDSNVRELEGVLSRVQAYSKLKGEPITTDLAYEALKGLKLETKSHQLSIVDIQSKVADYFHVSVNDLKGKKRLASIVMPRQIAMYLARELTNNSLPKIGKEFGGKDHTTVIHAYEKIAEKIKIDTDLRKEITDLKKGLG
>NZ_CP018906.1|WP_035166545.1|853509_854649_-|DNA-polymerase-III-subunit-beta
MKFTISKSAFIKGLNTVSRAISTKTTIPILTGLKIVATNQSLILTGSDADISIETTIKTSDPDNLLAVESEGAIVLPARFFTEIVKKLPEDTLTIEVTDNFQTVITSGSASFTINGLDANNYPHLPEIDSSNSLPVAGDVLKQIISETVVAVSNQESRPILTGVHFTMDQDNILAVATDSHRLSQRKVALKQPFENSYDFVLPGKSLAELSKMIDDSKDDILLSVTENQALFVVGDTLFYSRLLEGNYPDTSRLIPDSFDTRVSFDASALLSTVERASLLSHESRNNVIKMIIEPDEKKVTIYGNSPDVGVVQENIDPISLEGNQLEISFNPDYMKDALRSLSQTSINVDFTSALRPFTLMPTEDGESFIQLITPIRTF
>NZ_CP018906.1|WP_191982088.1|853036_853267_-|S4-domain-containing-protein-YaaA
MKKEILIDGEYITLGQLLKEESIISSGGQAKWFLRETAVDVNGEPENRRGKKLRDGDNVSVPDVGLFFIRSKQESE
>NZ_CP018906.1|WP_035166559.1|863830_865027_-|multidrug-effflux-MFS-transporter
MKSNISGKKQAWLAFILGTVSATGPLSMDMYLPALPQMATDLHTQVSVLQLSLSACLIGLALGQLIVGPLSDKFGRKKPLIIGFALFGIVSLMISMTNSITLLIGLRFIQGLAGSSGQVLSRAIARDLFSGPLLTKFYSMLSAVNGIFPVLSPVIGGIIIQYTSWQGIFVVLAVIGLLVVLALFCGIKETLPTNERTDGGFISTIASIGALVKNGRFLRLIISAGLVTGGLFAYISASSFVFQDYFNMSVQNFSFLYALNGIGIAIGSIIPGFLASRVPETKQTKIVLMTAFISSLLLVGSWYTFRSLPIVIVLVFLIVTQFGVLFTLTTSIVMNIGSRNGGSISALFGLAQNGTGSLMSPIVGLFGTATYLPMAVAIAICMILSFTLFSTLNMKPQR
>NZ_CP018906.1|WP_052127742.1|865191_865812_+|signal-peptidase-I
MSKKSKAEQKPNSKFAEAMSWIIPIVVGVLVALLLRQFVVTFARVDGPSMEPNLVNNERMIVWRQAKVKHLSVIVFDAHGVDPEATKPNTDYVKRVIGMPGDTVSSRNGNIYVNGKKINQNFINKYQRTTGTGNWDLKSLSKSWSRHTNSVKVPKGEYFALGDHRSVSNDGRYWGFIPKKKVLGVAKTFFWETNKTKRNNVNNLAY
>NZ_CP018906.1|WP_035166560.1|865884_866526_+|hypothetical-protein
MVDLDKLYRILSQHLGPSGWWPADSKREIIIGAILVQNTNWNNAALGLVSLKAKTAFEPKNILSLSQSELMEIIKSSGFYKNKSRAILATFEWLNNEGWDYDEIRDRYGDNLRQQLLKIPGIGQETADVFQVYIFDKPVFIADSYTRRLFSKLGYRKTKTYQDLWRQVKLPASFSYQDAQEFHGLIDNFGKQYLRYAGQFEKSFLNNKDVKHS
>NZ_CP018906.1|WP_078256912.1|866545_867190_-|histidine-phosphatase-family-protein
MKTVYLVRHGQTILNRFRRMQGWVDSPLTEAGERQASATGKLLSQVHFDLALSSDMMRAIRTRDLILAENTASTVTPIIDKNFREVYFGSFEGIDSVLTWNQIGGPHGSFDQDVLIKKYDTFKVRDFMHDADPFKEAETGDDLKHRIQLAFSDVQKQLKDGETALVVSHGTFIRNVATLYSKPGGFVEQPQNGSIAVLDVTAEPELLKYNQTEI
>NZ_CP018906.1|WP_035166562.1|867251_867848_-|aminodeoxychorismate/anthranilate-synthase-component-II
MNFLIDNYDSFSYNLSQLIGTLTNGNVTVLKNDDPQLDHLEDLNPERIILSPGPGRPEDAGKLMEVLDKFIGKTPILGVCLGHQAIAEAYGGKVVHANKLMHGKPSNITVLEQNQLFNDCPSSFTAARYHSLVVSHGPLPIDLSVSAVSEDREIMAIADEERAVYGIQFHPESIMTDTSVANQIVSNFLATSPVTVQA
>NZ_CP018906.1|WP_035166563.1|867831_869307_-|anthranilate-synthase-component-I-family-protein
MNIENLLNLKQDYALLPITIEFKDTNFDALSIMREFQIAGKPSLMMTGKPKQNEDGYTFICVDPEASYTYRNGKLTIDNFTGDLKTTATPLHPFVENLLEQNRTPRLAGLPPFTGGVVGYFGYDYSRYATTASITQVTDPHELADADLMLVKTVVAYNHTSQQVTIIKLVNASRVEELFEKTTAELNKFKQRIMSPTTQIPIKAPELSPLKLQFSLAEFSKKVAATKQHIVDGDIFQLILSNPHMATIKGSLLGSARRFFNQNPSPYQFYFHHDDFESVGASPETLITKRQESLFSYPLAGTRRRGKTAAEDQQLAKELQTSEKELSEHNMLIDLGRNDLGRVSEFGSVNVISARNLLKFSSVMHLGSVIESQAAKDITAMDIVDSVLPAGTLSGAPKVSAMQIIAKLENNKRGIYGGGIGYLGFNGDLDLCIGIRLAYRKGNHLIIHSGAGIVADSVAKYEYQEFNNKARGVINSLYPVSEEENAHEFSN
>NZ_CP018906.1|WP_035166565.1|870062_871073_+|3-deoxy-7-phosphoheptulonate-synthase
MIIVIKPGNEAMVHEISQRFANKADVFTHGNRVAIQGADRDCLSAEELAATQEIIENHPAAIQGSRVFHPEDTVIETAHSLIGGDNFTMMAGPCSVESLAHVRKMAAVAKQGGATVLRGGAFKPRTSPYSFQGLGEPGLKFLRQAADEFGMDVLTEVMDEDHVEMVGKYTDIFQIGARNMQNFSLLKAVGKTNIPVMLKRGMSATVDDILNAAEYIAAGGNEQIMIAERGIRTFDNKYTRNTLDVGSVPVLQKLSHYPVIVDPSHAAGHTEFVTREALAGVAIGASGLVVEIHDDPAHAFSDGAQALKPDEFQAMADKAFAIRSLVKPNQKAEVNA
>NZ_CP018906.1|WP_035166567.1|871072_872158_+|3-dehydroquinate-synthase
MEILDVNIPSHPYQVKIGRNLLASTGSLVASVWQPRKVALISDDNVAPLYQEKVAESLTKSGFTVCAYRFPAGEQSKSLDVLGELATQMTDDGFNRDDGVIALGGGVTGDLAGFVAASYMRGLPLIQIPTSFLAQVDSSVGGKTAVDLGTTKNILGAFLQPDLVIVDPETLKTLDQRDLVEGYGEVVKVAGLTDHDIWSLVKMINSPTDILKNSEKLSELAIKYKAEVVEADEKEGGLRQVLNFGHTIGHAVEALSDGKLRHGEAVAIGMVAISQVFTDHGLTPATVTEQLKERLASVNLPVEMPSVSPKQVLAKVKNDKKNHDGKLNLVFLKEIGGPAIKSVDLEDVADFLGLTSDASSH
>NZ_CP018906.1|WP_035166569.1|872625_874005_+|branched-chain-amino-acid-transport-system-II-carrier-protein
MNNQETKLGMKHYIIIGSMLFGMFFGAGNLIFPIHLGQLAGSNWLIAGIGFLLTGTLLPLLAIIAISVTRSSGIYDLAKPIGSKYATFFMLLVCATLGPLFATPRTATVPFQIGFASHLSKADQPLWLFIYSLIFFGITYWASRKPTNIINTIGKLLNPAFLILLAIIFGFAFSQPIHGGNSMTPSTGYGNAAMLNGFLQGYNTMDCIAGLLFGIAIVTAIKGLGAKSPRQISMTTLKSGLLGIGLEAIIYIGLIWLGSTSLSMFKTSIDGGIAFNQIANHYLGMTGQIILAIMATLTCLTTAVGLSASFSEALHRKFPNISYRTFNIMAVGFSFAFANVGLDTIIAWSTPMLMFLYPLAITLIILSITSPLFNKDRRVYIWTTIFTIIPAILDAIASAPAIISKSAIAQGILKLDNFLPGASLGMDWLLPAGIGLAIGLIIHFATSFSGEKATEIEHE
>NZ_CP018906.1|WP_035166570.1|874027_875233_+|cation:proton-antiporter
MDFIGALCFLLIVSTLCGHLANRFKIPAVIGQIGAGIIIGPAVLNLIQPTSAINLFSNIGVIVLMFIGGIGSNLELLKKYLRPAIIVAVIGVIFPVIMIGIALIWFNFSMFEAIFIGVIFSATSVSISVEVLKDYHSLNTKEGATILGAAVADDIIGVVLLSIMVSLIGTIKGGQSVDFSKFGVLFIGQVIFVAVTYFMMKWIVPYLMGISEKLLMSSSPTIVCIVICLFMAWLAEKVGLSGAVGAFFGGIAVSKTAEAKLIESHVESIGYAVFVPVFFISIGLKMSFSGIGQSLGLVIVLTALACASKLLGCGLGSVVSGNSLRSSYLIGSGMISRGEMGLITAQIGFSQHIISSQYYSAVILVIILTTLIAPLLIKHSLHGLKNQDSVISDSELADGTK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP018906_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP018906_4

1407760-1407853

Orphan

Consensus_repeat	Method
TAGTTTGATATTCAAACTAATTTA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP018906_4

>merge|NZ_CP018906|4|1407760-1407853|CRISPRCasFinder
TAGTTTGATATTCAAACTAATTTATATTATCATGACTAACGTCCGTTAAGGGCGTTTTATTTTTACCTAATAGTTTGATATTCAAACTAAATTT

>NZ_CP018906|4|4|1407760-1407853|CRISPRCasFinder
TAGTTTGATATTCAAACTAATTTA	TATTATCATGACTAACGTCCGTTAAGGGCGTTTTATTTTTACCTAA
TAGTTTGATATTCAAACTAAATTT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP018906.1\|WP_078256985.1\|1399719_1400541_+\|glycine/betaine-ABC-transporter	unknown	unknown	gnl\|CDD\|270357
NZ_CP018906.1\|WP_035168236.1\|1402641_1403358_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP018906.1\|WP_035168250.1\|1409851_1410088_+\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP018906.1\|WP_035168233.1\|1400750_1401410_+\|deoxyribose-phosphate-aldolase	unknown	unknown	gnl\|CDD\|234784
NZ_CP018906.1\|WP_035168231.1\|1398774_1399626_+\|proline/glycine-betaine-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226644
NZ_CP018906.1\|WP_035168229.1\|1397582_1398782_+\|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|226643
NZ_CP018906.1\|WP_035168239.1\|1404343_1405645_+\|pyrimidine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180387
NZ_CP018906.1\|WP_035168260.1\|1413472_1413889_+\|beta-hydroxyacyl-ACP-dehydratase	unknown	unknown	gnl\|CDD\|238615
NZ_CP018906.1\|WP_035168253.1\|1410105_1411014_+\|ACP-S-malonyltransferase	unknown	unknown	gnl\|CDD\|223408
NZ_CP018906.1\|WP_191982102.1\|1403390_1404320_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|225263
NZ_CP018906.1\|WP_035168405.1\|1412997_1413468_+\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	unknown	unknown	gnl\|CDD\|235777
NZ_CP018906.1\|WP_035168243.1\|1407891_1408338_+\|3-hydroxyacyl-ACP-dehydratase-FabZ	unknown	unknown	gnl\|CDD\|234568
NZ_CP018906.1\|WP_152639006.1\|1405785_1407699_+\|S8/S53-family-peptidase	unknown	unknown	gnl\|CDD\|173788
NZ_CP018906.1\|WP_035168248.1\|1408834_1409818_+\|ketoacyl-ACP-synthase-III	unknown	unknown	gnl\|CDD\|236475
NZ_CP018906.1\|WP_035168262.1\|1413907_1415281_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	unknown	unknown	gnl\|CDD\|236307
NZ_CP018906.1\|WP_035168256.1\|1411018_1411750_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	unknown	unknown	gnl\|CDD\|235500
NZ_CP018906.1\|WP_035168245.1\|1408358_1408838_+\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|197670
NZ_CP018906.1\|WP_035168234.1\|1401436_1402645_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP018906.1\|WP_035168227.1\|1395960_1397328_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|225174
NZ_CP018906.1\|WP_035168258.1\|1411763_1412993_+\|beta-ketoacyl-ACP-synthase-II	unknown	unknown	gnl\|CDD\|274452

Protein	Function_ID	Function_description	E-value
NZ_CP018906.1\|WP_078256985.1\|1399719_1400541_+\|glycine/betaine-ABC-transporter	gnl\|CDD\|270357	cd13639, PBP2_OpuAC_like, Substrate binding domain of Lactococcus lactis ABC-type transporter OpuA and related proteins; the type 2 periplasmic binding protein fold. This subfamily is part of a high affinity multicomponent binding-protein-dependent transport system specific to betaine compounds for osmoregulation. The periplasmic substrate-binding domain, which is often fused to the permease component of the ATP-binding cassette transporter complex, is involved in uptake of osmoprotectants (also termed compatible solutes) such as glycine betaine and proline betaine. Many microorganisms accumulate these compatible solutes in response to high osmolarity to offset the loss of cell water. This domain belongs to the type 2 periplasmic binding fold protein superfamily (PBP2). The PBP2 proteins are typically comprised of two globular subdomains connected by a flexible hinge and bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	1.84623e-76
NZ_CP018906.1\|WP_035168236.1\|1402641_1403358_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	1.56766e-144
NZ_CP018906.1\|WP_035168250.1\|1409851_1410088_+\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	3.02219e-17
NZ_CP018906.1\|WP_035168233.1\|1400750_1401410_+\|deoxyribose-phosphate-aldolase	gnl\|CDD\|234784	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional.	5.07149e-111
NZ_CP018906.1\|WP_035168231.1\|1398774_1399626_+\|proline/glycine-betaine-ABC-transporter-permease	gnl\|CDD\|226644	COG4176, ProW, ABC-type proline/glycine betaine transport system, permease component [Amino acid transport and metabolism].	4.28565e-131
NZ_CP018906.1\|WP_035168229.1\|1397582_1398782_+\|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein	gnl\|CDD\|226643	COG4175, ProV, ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism].	0
NZ_CP018906.1\|WP_035168239.1\|1404343_1405645_+\|pyrimidine-nucleoside-phosphorylase	gnl\|CDD\|180387	PRK06078, PRK06078, pyrimidine-nucleoside phosphorylase; Reviewed.	0
NZ_CP018906.1\|WP_035168260.1\|1413472_1413889_+\|beta-hydroxyacyl-ACP-dehydratase	gnl\|CDD\|238615	cd01288, FabZ, FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.	9.70872e-45
NZ_CP018906.1\|WP_035168253.1\|1410105_1411014_+\|ACP-S-malonyltransferase	gnl\|CDD\|223408	COG0331, FabD, (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism].	1.65731e-88
NZ_CP018906.1\|WP_191982102.1\|1403390_1404320_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|225263	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription].	2.31269e-99
NZ_CP018906.1\|WP_035168405.1\|1412997_1413468_+\|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein	gnl\|CDD\|235777	PRK06302, PRK06302, acetyl-CoA carboxylase biotin carboxyl carrier protein.	2.2049e-44
NZ_CP018906.1\|WP_035168243.1\|1407891_1408338_+\|3-hydroxyacyl-ACP-dehydratase-FabZ	gnl\|CDD\|234568	PRK00006, fabZ, 3-hydroxyacyl-ACP dehydratase FabZ.	2.79496e-76
NZ_CP018906.1\|WP_152639006.1\|1405785_1407699_+\|S8/S53-family-peptidase	gnl\|CDD\|173788	cd04056, Peptidases_S53, Peptidase domain in the S53 family. Members of the peptidases S53 (sedolisin) family include endopeptidases and exopeptidases sedolisin, kumamolysin, and (PSCP) Pepstatin-insensitive Carboxyl Proteinase. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of Asn in subtilisin. The stability of these enzymes may be enhanced by calcium, some members have been shown to bind up to 4 ions via binding sites with different affinity. Some members of this clan contain disulfide bonds. These enzymes can be intra- and extracellular, some function at extreme temperatures and pH values. Characterized sedolisins include Kumamolisin, an extracellular calcium-dependent thermostable endopeptidase from Bacillus. The enzyme is synthesized with a 188 amino acid N-terminal preprotein region which is cleaved after the extraction into the extracellular space with low pH. One kumamolysin paralog, kumamolisin-As, is believed to be a collagenase. TPP1 is a serine protease that functions as a tripeptidyl exopeptidase as well as an endopeptidase. Less is known about PSCP from Pseudomonas which is thought to be an aspartic proteinase.	2.5302e-78
NZ_CP018906.1\|WP_035168248.1\|1408834_1409818_+\|ketoacyl-ACP-synthase-III	gnl\|CDD\|236475	PRK09352, PRK09352, beta-ketoacyl-ACP synthase 3.	6.68806e-154
NZ_CP018906.1\|WP_035168262.1\|1413907_1415281_+\|acetyl-CoA-carboxylase-biotin-carboxylase-subunit	gnl\|CDD\|236307	PRK08591, PRK08591, acetyl-CoA carboxylase biotin carboxylase subunit; Validated.	0
NZ_CP018906.1\|WP_035168256.1\|1411018_1411750_+\|3-oxoacyl-[acyl-carrier-protein]-reductase	gnl\|CDD\|235500	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated.	8.52212e-111
NZ_CP018906.1\|WP_035168245.1\|1408358_1408838_+\|MarR-family-transcriptional-regulator	gnl\|CDD\|197670	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein.	6.22484e-16
NZ_CP018906.1\|WP_035168234.1\|1401436_1402645_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP018906.1\|WP_035168227.1\|1395960_1397328_+\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|225174	COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis].	4.09319e-164
NZ_CP018906.1\|WP_035168258.1\|1411763_1412993_+\|beta-ketoacyl-ACP-synthase-II	gnl\|CDD\|274452	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II. 3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model. [Fatty acid and phospholipid metabolism, Biosynthesis].	0

>NZ_CP018906.1|WP_152639006.1|1405785_1407699_+|S8/S53-family-peptidase
MKIGKYKLASLVIAATIGLGVSSQTVSAKKKDSDKGYDIQKILDKLNGKGSKLSPKKTIIIDVFLKPKNEAKMSSQIYAVNTPGTSDFKHFYTPQRFAQEFGQSEQTANQFKRYFTKYKLSTHRYQNGLVLRIKGKVSNINRALNTNLQTARYHEDPVQFSAKKPKMPKSLSQHVLAILGITNFNPKANMAKFINHKKQKQTHHKQKVFSKYAPTKFTRHYNLDSLSSQGQEGQGQTMGIITFAGFNKQDVSHFWKHENVPASTKRVSIKKLANPVATTSDTKTNKLETTLDVEQAGAVAPKANVRVYQANFNDVGLVNTFATAFDENKAQSLSMSWGISEYMTHYLKNHKMWTPEYAKIMNIILAQGALQGVSTFVASGDSGAYNQGVGGKIGPFSIPNFNTYANFPSDSPWVTSTGGTTLPFKKKLAKDLSIDVKRERTWGGDYMYPAFQKRRSFFTKNIKNALLLTKIFAGGGGGISSLYNTPLYQEQVPGVNTFNARQYLSITLQPKINPVLVSGTDYGRNYPDLSANADPMTGYQMYQKSLGGWNVIGGTSVVAPQFSGATAVMNSGRTSRMGFWNPQIYKLAQDKINTPFTVLDSTTNNSNLYYTGQPGKPYNQASGLGTVNFEKLFSTFK
>NZ_CP018906.1|WP_035168239.1|1404343_1405645_+|pyrimidine-nucleoside-phosphorylase
MRMVDIIHAKRSGEELTDEQIQFFVDGVVSGSIPDYQTSALLMAIYFQGMTEEEQSSLTMKMMESGDHLDLSSIPGVKVDKHSTGGVGDKVSIPLAAVVAALGIPVPMISGRGLGHTGGTLDKLEAIPGYQVEISESEFIDQVKKEKCAIVGATGNIAPADKKIYALRDVTDTVDSIPLIAGSIMSKKIASGTDALVIDVKTGAGAFMKTIEDSRNLAKALVGIGKGVGMKCMALITDMNQPLGNAIGNALEIKESIELLKNNGPEDLVDLTTTIGGYMAVMGDVADTPEAGKQLCAEVIANGKALASFKAMVAAQHGDAKVVDDPDSVLPQAKYKIDLPAKESGVISKIVADEVGVASMLLGGGRQKADDKLDYSVGIYLHHKVGDQVNSGEPLLTIYSNREDVDDIKDLLYSNIEVSSSAQKPTLIYETIE
>NZ_CP018906.1|WP_191982102.1|1403390_1404320_+|helix-turn-helix-domain-containing-protein
MDKLKQSLQAAEMYYQDNASQSEIAKSLGVSRPTVSRLLQYAKDAGIVKIQIVNPVVSAQVLADKLVEKYGVEVHVVSNNYLGNITTQDSVGAYAADYLTTIVKPQDVIGIGWGKTIHNVTEHLEPQSVPGVRVVQLKGSVSYSNQKTYAHESVNELANAYQVAPEYLPLPVIFDNEETKEMVEQDRYISSILELGKRANIALFTVGTVRSEALIFQLGYFNDREIKQLQNAAVGDIVSRFIDEDGQVVNSEIDSRTVGITLDDLKNKEHAILVAYGNQKAAGVNAVLKAGYANCVIVDQTLAQLLLDF
>NZ_CP018906.1|WP_035168236.1|1402641_1403358_+|purine-nucleoside-phosphorylase
MSTHIGANKGDIAETVLMPGDPLRAKFIAENYLDNVVQYSSVRNMFGFTGTYKGKRISVQGSGMGIPSLAIYTTELIKEYGVKTIYRVGSCGGMSPDVHMRDVILGQAGTTDSSIIENTFGPNMYYSPIADFGLLDSAYHTAEEMGINTKVGNIFAADRFYNDEIDIQKLIDYGVLATEMETSGLYLLAAKHHIRALTILTVSDHLLSGEAMSAKDRETSFDEMIRLALNTAVKNIEE
>NZ_CP018906.1|WP_035168234.1|1401436_1402645_+|phosphopentomutase
MTKKYKRIFGIVLDSVGTGEAFDAEKYGDVGSDTLGHVGEAYKGDLKIPNLQKLGIANLRDKPILGVDKVDKPIGYFGKMKEISAGKDSMDGHWEMMGLPVEKPLDTFPNGFPDSIIKQIEDFSGRKVIGNRPESGTKIIAELGEDQMKTGDLIVYTSGDSVLQIAAHEDVIPLDELYKICKFARSIVNGPEYTVGRIIARPYVGPDKDHFTRTANRHDFTLEPTGTTDLDYLQKAGVHTVGIGKINDIFSGHGIDEGYHNESNMDGMDHVDHVMAEDFEGFCLTNLVDFDAMYGHRRNPIGFGQALMDFDQRLEKVLNNLKDDDLLLITADHGNDPGFKGTDHTREYVPLLAYSPSMTDTGSLGVRETFADFGATVLENFGVTGNPVGTSFLDELKQGATQ
>NZ_CP018906.1|WP_035168233.1|1400750_1401410_+|deoxyribose-phosphate-aldolase
MTLTNEELAKYLDHTNLKPDATREYIIKTCEEAAKYNTASVCVNSHWIPLVAEQLQNTDVNPITVVGFPLGETNTETKVFEAQTAIDDGAEEVDMVLNIGELIGGNTKFVTEDIKAVADAVHEKGKLLKVILETSYLNNDQIVAGSKASETAGADYVKTSTGFSSAGAKLDDVKLMRQTVGDRLGVKASGGIHSKEEALAMIDAGASRLGVSATVKILS
>NZ_CP018906.1|WP_078256985.1|1399719_1400541_+|glycine/betaine-ABC-transporter
MAKYNPKKPVGEQVDYTITGIDAGAGIMASTQKAIKAYGLDKDNWQLQTSSTAAMTSTLDKAYKKKLPIVITGWTPHWMFTKYKLKFLKDPKNVYGKAEDIHTVTRKNLQKDRPEAYKMLDRFHWTPEQMSSVMIKVNNGESPEKAAKNWIKNNPKQVAQWTKGIKHVKGQSFKMTYVAWDSEIASTNVVAEVLKSLGYKVTIQAMEMQPMWAAVAGNDADAMVSAWLPNTSAVFYKDYRSKIEDLGINLRGAKVGLAVPYYMKNINSIEDLK
>NZ_CP018906.1|WP_035168231.1|1398774_1399626_+|proline/glycine-betaine-ABC-transporter-permease
MNNIPQLPVAKWIDSLVDWLSGFEGFFNAITNFIGGIVDGFQWIFDLIPAWLFIILIVGFTYYLLRNRKHWSLIIFEIIGLIYVWNQGYWRDMTQTLTLVLTSSLIALVIGIPIGIWMAKSNVVQMIAKPILDFMQTMPAFVYLIPAVAFFGIGMVPGVIASVIFAMPPTVRMTNLGIRQVPTDLIEAADSYGSTSWQKLIKVQLPLAKSTLMAGVNQSMMLSLSMVVIASMIGAMGLGNKVYFAVGRNDAGSGFAAGLAIVILAIILDRVTQAINKKPADKS
>NZ_CP018906.1|WP_035168229.1|1397582_1398782_+|glycine-betaine/L-proline-ABC-transporter-ATP-binding-protein
MTIKLQVQNLTKIFGRRIGRAKELIDAGKSKAEILEQTGATVGVENASFEVNEGEIFVIMGLSGSGKSTMIRMINRLIEPTSGNILIDGQDLTGLSKKELLDVRRQKMSMVFQNFALFPNRTIVENTAYGLEVKGVDKAERLKKAHDALELVGLHGYDDQLPTQLSGGMQQRVGLARALANDSEILLMDEAFSALDPLNRKDMQNELLDLQENLHKTIVFISHDLNEALRIGDRIMIMKDGEVVQTGTPEEILTKPANEYVERFIEDVDRTKVLTASNVMIRPNTVNIDKDGPRIAIRRMRENEISSVYVVNSKREFVGIVDAKHALELIESGERKLDSIVERDIPTTSPDTPITTIMDQISKSPFPYAVVDEQKHLLGIIIRGAVLGAISGNEVVEGE
>NZ_CP018906.1|WP_035168227.1|1395960_1397328_+|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MKFTAPVAKNEKYEVIIEDLTYEGLGFAKIDDFPIFIENALVGEKIITLITKVKKNFAFGRTDEIITESPDRVHGIAKAYTQTGITPLQHLKYPAQLRFKQHQIQVDFDKLKVPAEVNETIGMDDPFHYRNKAQIPVRMLNGKLSTGFYKKHSHEMIPLEDFKIQDERIDKAVLIVRDILRKFQVNPYDERNHTGVIRNIMVRVGKYTDQMMIVLVTRTKKLPSTEEITREINEQIPGLTSLIQNVNSEKTNVVLGKKNIVLSGSDRIHDQLMGLDFEISANSFYQVNPVQTEKLYKLAIEKAELTKDDVVIDAYSGIGTISLSVAKAVNKVYGVEIVEDAVTDAKTNAMINGIKNVEFVVNKAEDQMAKWQADGLKPDVVIVDPPRKGLAESLIESVAEMNPKRVVYVSCNPATLARDVKLFGDFGYELNQPIQPVDQFPQTVHIESISVLEKK
>NZ_CP018906.1|WP_035168243.1|1407891_1408338_+|3-hydroxyacyl-ACP-dehydratase-FabZ
MSVLDASEIMDLIPNRYPILFMDKVDELEPGKSITVTKNVTINEEFFQGHFPGNPVMPGVLIIESLAQAASILILKSEEFAGKTAYLGAIDNAKFRKVVRPGDVLKLHVEMEKVRSNMGTVKCSANVDEKTACSCKLTFIVADADKKI
>NZ_CP018906.1|WP_035168245.1|1408358_1408838_+|MarR-family-transcriptional-regulator
MDQVLDRRKEEEHSDFKFISDSMIDIYDSIMRIEESEIRKSRFKDVTAKELHLIHAIGLHAHKTTSEVANYLKLSKGTLTANINTLERKGYVKRVPNQVDRRIINLELTDKGRILFRAHSAFHSALVKSVLDGFSDDNVEIIEQVLKRLLGFIDEVSDK
>NZ_CP018906.1|WP_035168248.1|1408834_1409818_+|ketoacyl-ACP-synthase-III
MKYENVSVLQSARKIPARVVTNDELSEMMDTSDEWITQRTGIKRRHVADGETTTSLSVDVSRELLANANVAPEEIDYIVVATMSPDFLTPSVAATVQGEIGATNAVSFDLNAACSGFSYGLSVVQKLLVSDEPKKAILIGGEVLSKLIDWHDRSTAVLFGDGAAGMLLTNSATETGAILGSDLRTLGELGKYLTAGQTGETTPFQTDQPEFSRFFAMNGRRVYNFAVKNVPISIEAALKQANLTLADVDHFVLHQANVRIVERIAEKLEVDFDKFDTNIDEYGNTAAASEPILFDELVQKGKINRGDVVVLSGFGGGLTIGTIILKY
>NZ_CP018906.1|WP_035168250.1|1409851_1410088_+|acyl-carrier-protein
MTKEEVFNKVKEIIVDQLDVDADKVTETTNFKNDLDLDSLDIFEVVDKIEDSYDIEIETDDGMETVGQLVDYVVKKAE
>NZ_CP018906.1|WP_035168253.1|1410105_1411014_+|ACP-S-malonyltransferase
MKLGYLFSGQGSQFKEMGQDLYKAEPVYKDTVDEAAEILGMDLANSAVFDDPDNVQVAILTMSTGIFRLLNQDLGNPVAAAGLSLGEYSALVAASAISFDDALPLVHDRSQYMDEAGKANPGVMAAVLNADSEVLTTALKVGSEAGRVYPANYNTDSQIVIGGDEAGVNAASTYLKEHGVKRVVPLKVAVASHTPLMSSAADKLGLRLENVDFSEPAFPVISNTTSTPFTLSDVKDVLKRQLVNPTHFSDGVQAITDLSADTLVEIGPGTTLTKLAKKINRGVDTYHVDSVETLAELREKLG
>NZ_CP018906.1|WP_035168256.1|1411018_1411750_+|3-oxoacyl-[acyl-carrier-protein]-reductase
MTDDKKVALVTGAAKGIGLATAKRLSDDGYTVAINTHSELSDDQRAELKKAGYDFEAVVGDVSDDDSAKAMVDTVFEKFGRIDVLVNNAGITRDKLLTRIKADDFKAVIDTNLVGTFNMTKYAMKYMQKQRSGAIVNLSSISGLHGNIGQANYSASKAGVVGLTKTAAREGALRGIRVNAVAPGMVRTDMVEAMSEKRQQEFADTIPLKRFGNVKEIADTVSFLVNNEYITGQVVTVDGGLTI
>NZ_CP018906.1|WP_035168258.1|1411763_1412993_+|beta-ketoacyl-ACP-synthase-II
MTRVVVTGMGTVNPLGNDVKSFLDNMFDSKVGISKITKFDATETGITVAGEVKDFDPTVRMDKKAARRNDAFSNYAVYSAKEAMEMAGLNEDNVDPYMLGVIYGSGIGGLTTIEEQVIKMHDKGPKRVSPLFVPNSIANMAAGNIAIEFNALNTSQAVVTACSSGTNAIGNAFEFIKSGKADVMIAGGAEASVNEIGISGFAALTALTKSEDPMNASIPFDKDRNGFVLGEGAGTLILESYDHAKARGANILCEIVGYGTTSDAYHMTAPDPEGKGAMRAMQQAIDEANIPASDVDYINAHGTSTKANDSAESKAIADVFKDNDYVKVSSTKSMTGHLLGAAGAIEAVAVVGSIQRNQMPVNVGVKNQDEECPVDLVTEDNKKGAVNVAISNSFGFGGHNAVLAFKGVE
>NZ_CP018906.1|WP_035168405.1|1412997_1413468_+|acetyl-CoA-carboxylase-biotin-carboxyl-carrier-protein
MDEKEIERLMDKFDQSSLMNFELQNEDFKLALSKREEGDTTIIGNPGVADQGTTQSETVATDANSQEAATPVVDDANLAEIKAPLVGVVYFAPSPDKPAFKKVGDHVSKGEVVCVIEAMKMINEVKSDIDGVIKNALVGDGAMVEFDQPIFSVEKE
>NZ_CP018906.1|WP_035168260.1|1413472_1413889_+|beta-hydroxyacyl-ACP-dehydratase
MDLNVQDVIPQRYPFQMIDYFNEVNPGESASATKLITINEWFFANQPHDHLVVPRPILIESVAQTGVAAILSMDDYKGKNVFFGGIRSAKFHDDFRPGDKLVMSVKLQKLKLNVGVGHGEISRDGEVIAEADLVFAIE
>NZ_CP018906.1|WP_035168262.1|1413907_1415281_+|acetyl-CoA-carboxylase-biotin-carboxylase-subunit
MFKKVLVANRGEIAVQIIRALHDMDIVAVAVYSSADQDSLFVSLADEAVKIGGPQPSESYLNMAEIISAANLTGCEAIHPGYGFLSENAEFAALCEECHINFIGPDSDIITLMGDKSNARIAMKKAGVPVIPGSDGVVNDVATAKQIADEIGYPVLLKSAAGGGGKGIREVDEPDELESAFLSTQQEARISYDDDDIYVEKLLTHTKHIEMQVIADNFGDVVYLPERDCSLQRNHQKVIEESPCTLISQEEREMLGGIVTKATKSLKYTNTGTFEFLMDQDHNFYFMEMNTRLQVEHTVTEEVTGLELIKAMILVANGDRLPFAQADATVKGYAIECRLNAENPYQGFAPQPGKIDHLYLPVGTMGVRFDSGIIQGSFISPFYDSMIAKVIVHLDNREIAVKKMKRVLSELEIGGVTTNQDFLAEIIHSDGFAGGKFDTNFIEDEILGNRRVTNGAK

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP018906_2	2.4\|379910\|22\|NZ_CP018906\|CRISPRCasFinder	379910-379931	22	NZ_LR215032	Mycoplasma gallopavonis strain NCTC10186 plasmid 2	174056-174077	1	0.955
NZ_CP018906_1	1.2\|379502\|22\|NZ_CP018906\|CRISPRCasFinder	379502-379523	22	NZ_CP016890	Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence	296392-296413	2	0.909
NZ_CP018906_1	1.2\|379502\|22\|NZ_CP018906\|CRISPRCasFinder	379502-379523	22	NZ_CP034470	Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence	543480-543501	2	0.909
NZ_CP018906_1	1.2\|379502\|22\|NZ_CP018906\|CRISPRCasFinder	379502-379523	22	NZ_CP034475	Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence	263276-263297	2	0.909
NZ_CP018906_1	1.2\|379502\|22\|NZ_CP018906\|CRISPRCasFinder	379502-379523	22	NZ_CP031650	Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence	151131-151152	2	0.909
NZ_CP018906_2	2.4\|379910\|22\|NZ_CP018906\|CRISPRCasFinder	379910-379931	22	MN693498	Marine virus AFVG_25M563, complete genome	29324-29345	2	0.909
NZ_CP018906_2	2.4\|379910\|22\|NZ_CP018906\|CRISPRCasFinder	379910-379931	22	MF974398	Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence	46153-46174	2	0.909
NZ_CP018906_2	2.4\|379910\|22\|NZ_CP018906\|CRISPRCasFinder	379910-379931	22	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	3188-3209	2	0.909
NZ_CP018906_2	2.4\|379910\|22\|NZ_CP018906\|CRISPRCasFinder	379910-379931	22	NZ_CP030149	Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence	40021-40042	2	0.909
NZ_CP018906_2	2.4\|379910\|22\|NZ_CP018906\|CRISPRCasFinder	379910-379931	22	MN036233	Leviviridae sp. isolate H2_Bulk_36_scaffold_25_e_142 hypothetical protein (H2Bulk3625e142_000001) gene, partial cds; and hypothetical protein (H2Bulk3625e142_000002), hypothetical protein (H2Bulk3625e142_000003), and RNA-dependent RNA polymerase (H2Bulk3625e142_000004) genes, complete cds	1152-1173	2	0.909
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP016613	Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence	1524392-1524416	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	CP023013	Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence	1103996-1104020	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP049790	Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence	949612-949636	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP049794	Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence	1722242-1722266	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP049788	Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence	1030422-1030446	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022766	Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence	1174080-1174104	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP039340	Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence	1760961-1760985	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP021763	Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence	1188997-1189021	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP015116	Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence	1361492-1361516	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP016555	Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence	707511-707535	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP049792	Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence	1497403-1497427	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052069	Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence	1106528-1106552	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP016915	Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence	1545111-1545135	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP025986	Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence	1411314-1411338	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022769	Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence	1181831-1181855	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP015851	Ralstonia solanacearum strain YC40-M plasmid, complete sequence	1290794-1290818	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022773	Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence	896686-896710	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022783	Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence	1109707-1109731	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022795	Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence	1106413-1106437	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052071	Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence	1069435-1069459	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP032696	Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence	291246-291270	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022482	Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence	1918609-1918633	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP009763	Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence	1077269-1077293	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	CP023015	Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence	882994-883018	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022779	Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence	1181820-1181844	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052075	Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence	1069402-1069426	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052085	Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence	1164466-1164490	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052095	Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence	1192074-1192098	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052105	Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence	1069403-1069427	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052077	Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence	1085983-1086007	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052087	Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence	1164466-1164490	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052097	Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence	1192074-1192098	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052115	Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence	1069416-1069440	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052127	Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence	1164466-1164490	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052079	Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence	1086006-1086030	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052089	Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence	1164470-1164494	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052093	Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence	1192074-1192098	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052101	Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence	1192074-1192098	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052099	Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence	1192074-1192098	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052107	Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence	1069416-1069440	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022781	Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence	862169-862193	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052117	Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence	1069405-1069429	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052125	Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence	1086006-1086030	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022793	Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence	1104622-1104646	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022785	Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence	1085289-1085313	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022787	Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence	1132956-1132980	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP022756	Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence	1179400-1179424	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052129	Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence	993093-993117	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052121	Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence	1069405-1069429	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052123	Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence	1086006-1086030	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052131	Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence	1164465-1164489	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	CP011998	Ralstonia solanacearum strain YC45 plasmid, complete sequence	534094-534118	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052073	Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence	1069401-1069425	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052081	Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence	1086006-1086030	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052083	Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence	1086006-1086030	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052109	Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence	1069416-1069440	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052091	Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence	1192075-1192099	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052111	Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence	852934-852958	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052103	Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence	1069427-1069451	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052119	Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence	1069405-1069429	5	0.8
NZ_CP018906_2	2.1\|379772\|25\|NZ_CP018906\|CRISPRCasFinder	379772-379796	25	NZ_CP052113	Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence	852934-852958	5	0.8

1. spacer 2.4|379910|22|NZ_CP018906|CRISPRCasFinder matches to NZ_LR215032 (Mycoplasma gallopavonis strain NCTC10186 plasmid 2) position: , mismatch: 1, identity: 0.955

ggcagcttttgcagcatttgca	CRISPR spacer
ggcagcttttgcagcttttgca	Protospacer
*************** ******

2. spacer 1.2|379502|22|NZ_CP018906|CRISPRCasFinder matches to NZ_CP016890 (Pantoea agglomerans strain C410P1 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

agccgacgttgcggcagctgac	CRISPR spacer
tgccgacgttgcagcagctgac	Protospacer
 ***********.*********

3. spacer 1.2|379502|22|NZ_CP018906|CRISPRCasFinder matches to NZ_CP034470 (Pantoea agglomerans strain CFSAN047153 plasmid pCFSAN047153_1, complete sequence) position: , mismatch: 2, identity: 0.909

agccgacgttgcggcagctgac	CRISPR spacer
tgccgacgttgcagcagctgac	Protospacer
 ***********.*********

4. spacer 1.2|379502|22|NZ_CP018906|CRISPRCasFinder matches to NZ_CP034475 (Pantoea agglomerans strain CFSAN047154 plasmid pCFSAN047154_1, complete sequence) position: , mismatch: 2, identity: 0.909

agccgacgttgcggcagctgac	CRISPR spacer
tgccgacgttgcagcagctgac	Protospacer
 ***********.*********

5. spacer 1.2|379502|22|NZ_CP018906|CRISPRCasFinder matches to NZ_CP031650 (Pantoea agglomerans strain TH81 plasmid unnamed1, complete sequence) position: , mismatch: 2, identity: 0.909

agccgacgttgcggcagctgac	CRISPR spacer
tgccgacgttgcagcagctgac	Protospacer
 ***********.*********

6. spacer 2.4|379910|22|NZ_CP018906|CRISPRCasFinder matches to MN693498 (Marine virus AFVG_25M563, complete genome) position: , mismatch: 2, identity: 0.909

ggcagcttttgcagcatttgca	CRISPR spacer
agcagcatttgcagcatttgca	Protospacer
.***** ***************

7. spacer 2.4|379910|22|NZ_CP018906|CRISPRCasFinder matches to MF974398 (Leptospira mayottensis 200901116 plasmid p2_L200901116, complete sequence) position: , mismatch: 2, identity: 0.909

ggcagcttttgcagcatttgca	CRISPR spacer
agcagcttttgcagcattggca	Protospacer
.***************** ***

8. spacer 2.4|379910|22|NZ_CP018906|CRISPRCasFinder matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 2, identity: 0.909

ggcagcttttgcagcatttgca	CRISPR spacer
agcagcttttgcagcattggca	Protospacer
.***************** ***

9. spacer 2.4|379910|22|NZ_CP018906|CRISPRCasFinder matches to NZ_CP030149 (Leptospira mayottensis strain MDI272 plasmid p_Lmay_MDI272_tenre, complete sequence) position: , mismatch: 2, identity: 0.909

ggcagcttttgcagcatttgca	CRISPR spacer
agcagcttttgcagcattggca	Protospacer
.***************** ***

10. spacer 2.4|379910|22|NZ_CP018906|CRISPRCasFinder matches to MN036233 (Leviviridae sp. isolate H2_Bulk_36_scaffold_25_e_142 hypothetical protein (H2Bulk3625e142_000001) gene, partial cds; and hypothetical protein (H2Bulk3625e142_000002), hypothetical protein (H2Bulk3625e142_000003), and RNA-dependent RNA polymerase (H2Bulk3625e142_000004) genes, complete cds) position: , mismatch: 2, identity: 0.909

ggcagcttttgcagcatttgca	CRISPR spacer
ggcagcatttgcagcatttgcc	Protospacer
****** **************

11. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP016613 (Ralstonia solanacearum FJAT-91 plasmid unnamed1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

12. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to CP023013 (Ralstonia solanacearum strain T110 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

13. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP049790 (Ralstonia solanacearum strain 202 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

14. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP049794 (Ralstonia solanacearum strain 204 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

15. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP049788 (Ralstonia solanacearum strain B2 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

16. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022766 (Ralstonia solanacearum strain T78 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

17. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP039340 (Ralstonia solanacearum strain UW386 plasmid pUW386, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

18. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP021763 (Ralstonia pseudosolanacearum strain RS 476 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

19. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP015116 (Ralstonia solanacearum strain EP1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

20. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP016555 (Ralstonia solanacearum FJAT-1458 plasmid plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

21. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP049792 (Ralstonia solanacearum strain 203 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

22. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052069 (Ralstonia solanacearum strain FJAT91.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

23. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP016915 (Ralstonia solanacearum strain CQPS-1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

24. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP025986 (Ralstonia solanacearum strain RSCM plasmid p-unname2, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

25. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022769 (Ralstonia solanacearum strain T60 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

26. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP015851 (Ralstonia solanacearum strain YC40-M plasmid, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

27. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022773 (Ralstonia solanacearum strain T42 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

28. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022783 (Ralstonia solanacearum strain SL3755 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

29. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022795 (Ralstonia solanacearum strain SL2330 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

30. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052071 (Ralstonia solanacearum strain FJAT454.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

31. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP032696 (Rhizobium jaguaris strain CCGE525 plasmid pRCCGE525b, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
catgccggcagcaattgctgcactg	Protospacer
 .*  *******************.

32. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022482 (Ralstonia solanacearum strain HA4-1 plasmid HA4-1MP, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

33. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP009763 (Ralstonia solanacearum OE1-1 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

34. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to CP023015 (Ralstonia solanacearum strain T25 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

35. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022779 (Ralstonia solanacearum strain SL3882 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

36. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052075 (Ralstonia solanacearum strain FJAT448.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

37. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052085 (Ralstonia solanacearum strain FJAT15353.F8 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

38. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052095 (Ralstonia solanacearum strain FJAT15340.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

39. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052105 (Ralstonia solanacearum strain FJAT15252.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

40. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052077 (Ralstonia solanacearum strain FJAT445.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

41. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052087 (Ralstonia solanacearum strain FJAT15353.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

42. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052097 (Ralstonia solanacearum strain FJAT15304.F6 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

43. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052115 (Ralstonia solanacearum strain FJAT1463.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

44. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052127 (Ralstonia solanacearum strain FJAT1303.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

45. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052079 (Ralstonia solanacearum strain FJAT445.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

46. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052089 (Ralstonia solanacearum strain FJAT15353.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

47. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052093 (Ralstonia solanacearum strain FJAT15340.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

48. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052101 (Ralstonia solanacearum strain FJAT15304.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

49. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052099 (Ralstonia solanacearum strain FJAT15304.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

50. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052107 (Ralstonia solanacearum strain FJAT15249.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

51. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022781 (Ralstonia solanacearum strain SL3822 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

52. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052117 (Ralstonia solanacearum strain FJAT1463.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

53. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052125 (Ralstonia solanacearum strain FJAT1452.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

54. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022793 (Ralstonia solanacearum strain SL2729 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

55. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022785 (Ralstonia solanacearum strain SL3730 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

56. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022787 (Ralstonia solanacearum strain SL3300 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

57. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP022756 (Ralstonia solanacearum strain T117 plasmid unnamed, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

58. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052129 (Ralstonia solanacearum strain FJAT1303.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

59. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052121 (Ralstonia solanacearum strain FJAT1458.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

60. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052123 (Ralstonia solanacearum strain FJAT1452.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

61. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052131 (Ralstonia solanacearum strain FJAT1303.F8 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

62. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to CP011998 (Ralstonia solanacearum strain YC45 plasmid, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

63. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052073 (Ralstonia solanacearum strain FJAT448.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

64. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052081 (Ralstonia solanacearum strain FJAT442.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

65. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052083 (Ralstonia solanacearum strain FJAT442.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

66. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052109 (Ralstonia solanacearum strain FJAT15249.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

67. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052091 (Ralstonia solanacearum strain FJAT15340.F6 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

68. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052111 (Ralstonia solanacearum strain FJAT15244.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

69. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052103 (Ralstonia solanacearum strain FJAT15252.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

70. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052119 (Ralstonia solanacearum strain FJAT1458.F50 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

71. spacer 2.1|379772|25|NZ_CP018906|CRISPRCasFinder matches to NZ_CP052113 (Ralstonia solanacearum strain FJAT15244.F1 plasmid Plas1, complete sequence) position: , mismatch: 5, identity: 0.8

agttgcggcagcaattgctgcacta	CRISPR spacer
aggtgcggcagcaattgctgctgcg	Protospacer
** ******************  ..

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

697588 : 706123

Synechococcus_phage(50.0%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035166378.1\|697588_698173_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	7.7e-27	34.8
WP_035166379.1\|698175_699192_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3F760	Synechococcus_phage	4.9e-69	47.4
WP_035166380.1\|699196_700636_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.4e-50	33.3
WP_035166381.1\|700620_702840_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.2e-134	38.8
WP_035166382.1\|702832_703516_-	phosphoribosylformylglycinamidine synthase subunit PurQ	NA	NA	NA	NA
WP_035166383.1\|703512_703779_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA
WP_035166384.1\|703781_704507_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	H8ZMN3	Synechococcus_phage	3.0e-44	41.3
WP_035166385.1\|704517_705651_-	5-(carboxyamino)imidazole ribonucleotide synthase	NA	NA	NA	NA
WP_035166386.1\|705631_706123_-	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.3e-21	43.9

DBSCAN-SWA_2

1901601 : 1909794

Staphylococcus_phage(28.57%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_035167126.1\|1901601_1902447_-	DegV family protein	A0A0N9SI50	Staphylococcus_phage	3.6e-17	38.5
WP_035167125.1\|1902538_1903027_-	dihydrofolate reductase	F8SJN4	Pseudomonas_phage	2.4e-18	35.6
WP_035167124.1\|1903037_1903988_-	thymidylate synthase	A0A0N9SH48	Staphylococcus_phage	7.2e-123	65.0
WP_035167122.1\|1904003_1905899_-	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	1.5e-55	29.2
WP_035167120.1\|1905899_1907126_-\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.3e-44	50.0
WP_035167118.1\|1907246_1908137_+	YitT family protein	M1Q1P6	Streptococcus_phage	5.2e-59	40.8
WP_035167116.1\|1908190_1909453_-	tetratricopeptide repeat protein	NA	NA	NA	NA
WP_035167114.1\|1909518_1909794_-	HU family DNA-binding protein	A0A0H3UZA0	Geobacillus_virus	8.0e-27	70.8

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP018906

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection