CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP009889	Pseudoalteromonas sp. OCN003 chromosome 2, complete sequence	2 crisprs	WYL,DEDDh,cas3,DinG	0	1	0	0
NZ_CP009888	Pseudoalteromonas sp. OCN003 chromosome 1, complete sequence	1 crisprs	csa3,WYL,cas3,DEDDh,DinG	1	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009889_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009889_1

122073-122317

Orphan

Consensus_repeat	Method
TAGTTAGTAAAATTATGATCTTTA	CRISPRCasFinder

4 spacers

DEDDh

The CRISPR arrays of NZ_CP009889_1

>merge|NZ_CP009889|1|122073-122317|CRISPRCasFinder
TAGTTAGTAAAAATATGATCTATAGCGTGGCATTGCATTAAAAATTACTAACTAGTTGGTAAAAATGTGATCTCAAATGTCAAAAAACAGCGTTTAGCTGACTAATGTTAGTAAAAAGCTGATCTGTTGGTTGATAAATACCCTTAATTTTAACTTTAGTTAGTAAAATTATGATCTTTATAAAACGAATAGTTAGTAAAAATGTGATCTATCATTTTCATAGTTAGTAAAAATATGATCTTTAA

>NZ_CP009889|1|1|122073-122317|CRISPRCasFinder
TAGTTAGTAAAAATATGATCTATA	GCGTGGCATTGCATTAAAAATTACTAAC
TAGTTGGTAAAAATGTGATCTCAA	ATGTCAAAAAACAGCGTTTAGCTGACTA
ATGTTAGTAAAAAGCTGATCTGTT	GGTTGATAAATACCCTTAATTTTAACTT
TAGTTAGTAAAATTATGATCTTTA	TAAAACGAATAGTTAGTAAAAATGTGATCTATCATTTTCA
TAGTTAGTAAAAATATGATCTTTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009889.1\|WP_040134814.1\|133987_135799_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173789
NZ_CP009889.1\|WP_040134793.1\|116666_117878_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP009889.1\|WP_040134795.1\|117894_118596_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP009889.1\|WP_040134803.1\|127756_128563_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009889.1\|WP_040134796.1\|119313_120987_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|270371
NZ_CP009889.1\|WP_040134810.1\|130370_132269_-\|beta-ketoacyl-synthase	unknown	unknown	gnl\|CDD\|238424
NZ_CP009889.1\|WP_040134786.1\|109568_111731_-\|hypothetical-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NZ_CP009889.1\|WP_040134812.1\|132397_133390_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227311
NZ_CP009889.1\|WP_040134802.1\|126735_127458_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP009889.1\|WP_052141085.1\|118817_119153_+\|DUF3718-domain-containing-protein	unknown	unknown	gnl\|CDD\|378871
NZ_CP009889.1\|WP_040134800.1\|124488_126657_+\|malate-synthase-G	unknown	unknown	gnl\|CDD\|235097
NZ_CP009889.1\|WP_040134809.1\|129535_130159_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
NZ_CP009889.1\|WP_040134807.1\|129280_129514_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009889.1\|WP_040134791.1\|115767_116394_-\|uridine-kinase	unknown	unknown	gnl\|CDD\|235492
NZ_CP009889.1\|WP_040134798.1\|121249_121834_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009889.1\|WP_040134805.1\|128786_129029_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009889.1\|WP_040134790.1\|114516_115746_-\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP009889.1\|WP_081991159.1\|111859_113368_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP009889.1\|WP_081991161.1\|113379_114156_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223904
NZ_CP009889.1\|WP_040136825.1\|122627_124235_-\|isocitrate-lyase	unknown	unknown	gnl\|CDD\|180592

Protein	Function_ID	Function_description	E-value
NZ_CP009889.1\|WP_040134793.1\|116666_117878_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP009889.1\|WP_040134795.1\|117894_118596_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	5.96036e-147
NZ_CP009889.1\|WP_040134796.1\|119313_120987_+\|OmpA-family-protein	gnl\|CDD\|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	9.20014e-71
NZ_CP009889.1\|WP_040134810.1\|130370_132269_-\|beta-ketoacyl-synthase	gnl\|CDD\|238424	cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.	2.9605e-78
NZ_CP009889.1\|WP_040134786.1\|109568_111731_-\|hypothetical-protein	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	3.85572e-52
NZ_CP009889.1\|WP_040134812.1\|132397_133390_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.89517e-66
NZ_CP009889.1\|WP_040134802.1\|126735_127458_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	1.0437e-127
NZ_CP009889.1\|WP_052141085.1\|118817_119153_+\|DUF3718-domain-containing-protein	gnl\|CDD\|378871	pfam12514, DUF3718, Protein of unknown function (DUF3718). This domain family is found in bacteria and viruses, and is approximately 70 amino acids in length. There is a single completely conserved residue C that may be functionally important.	4.36282e-15
NZ_CP009889.1\|WP_040134800.1\|124488_126657_+\|malate-synthase-G	gnl\|CDD\|235097	PRK02999, PRK02999, malate synthase G; Provisional.	0
NZ_CP009889.1\|WP_040134809.1\|129535_130159_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	1.86769e-47
NZ_CP009889.1\|WP_040134791.1\|115767_116394_-\|uridine-kinase	gnl\|CDD\|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	9.96156e-128
NZ_CP009889.1\|WP_040134814.1\|133987_135799_+\|S8-family-serine-peptidase	gnl\|CDD\|173789	cd04059, Peptidases_S8_Protein_convertases_Kexins_Furin-like, Peptidase S8 family domain in Protein convertases. Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.	7.8923e-95
NZ_CP009889.1\|WP_040134790.1\|114516_115746_-\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	0
NZ_CP009889.1\|WP_081991159.1\|111859_113368_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	2.28143e-05
NZ_CP009889.1\|WP_081991161.1\|113379_114156_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223904	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms].	8.42686e-11
NZ_CP009889.1\|WP_040136825.1\|122627_124235_-\|isocitrate-lyase	gnl\|CDD\|180592	PRK06498, PRK06498, isocitrate lyase; Provisional.	0

>NZ_CP009889.1|WP_040134798.1|121249_121834_+|hypothetical-protein
MEALKVKNNIDQAIDALSLPSAELLEEMQALGIELPDKPSVSKKVDLTTINSTVLTTHLTELFLDKNKLLKTFSEFSLSEQVALRAFLYNLIPMLHLPPASIIEKMQQEGVFDVLIGEQDKAQAVKDKIAALNAEKEQNKLNAVKERLAKLSDTPKQCADELKIARVKSNLNKATSQTQTAELIDIKSKIAQLG
>NZ_CP009889.1|WP_040134796.1|119313_120987_+|OmpA-family-protein
MEHEKTLLIDQIISTAKREFDIDLVKEKLLSEEEYRTLVFTELNSLENAELNRLIGSFNQANQTQPSASSRDEVLDSKRNKGLLIAASVAVITLSVIGAWFGLSGKSEQPNKVVAVPAKVVSQKSPEMTKPKAIEAEPEQIFKPLFAIHGSNTIGEKLAPALLKAYFEEQGASDIDWQQGGIATERTMQFDMDGEKLAIGLAAHGSSTAFKALNANMAQIGMSSRKIKTSEIEALKGQSGDLSKLGNEHIIALDGLAIIVNQNNPLKAITTETLSRIFSGEISNWAEIGGEQAPIKVLARDNNSGTFDTFKSLVLKKYGRKLTASAERFESSSELSERVSQDDFAIGFIGLNYIRYSKALAIADSNETKAIYPTRFTIATEDYPLARRLYLYTPTNSATQIKDFANFAISDRGQEIVQSLGLISQSIRVEDVASSELAPDKYNQYAKLAKRLSLNFRFNYATRDLDNKGKRDLQRLVSFVEQNPSKKLVLMGFSDSIGARDKNTLLSLSRAKSVEQELNARGINVYAVEGFGEDMPLANNDNEVGRERNRRVEVWVL
>NZ_CP009889.1|WP_052141085.1|118817_119153_+|DUF3718-domain-containing-protein
MKALALTAVSVSLLAVPTMATAFNKSTIESVLVQTCKDVKSNKVYKLKANLKENHLRVHVINEKLMCNGESVYDFAMTHNADKTAKMLRTGSVSIQDVALNNADKIWVWLD
>NZ_CP009889.1|WP_040134795.1|117894_118596_+|purine-nucleoside-phosphorylase
MSTPHINAQLNDFAETVLMPGDPLRAKHIAETFLDDAREVTSVRNILGYTGTYNGKPVSIMASGMGIPSMSIYARELIVSYGVKNLIRIGTCGGIGSDIKIRDVIFAQGASTDSNVNRARVQGYDFAAIADFDLLVNGVEAAKRLGISAKVGNVFTTDTFYQASTDLYQQLDKLGVLAVDMETAGLYGVAAEYGANAMALFTVSDHVITGEATPSEERQNSFNEMVKIALESI
>NZ_CP009889.1|WP_040134793.1|116666_117878_+|phosphopentomutase
MARALILMADSLGIGAAPDAESFGDKGANTLAHLLAAYHGETGQKLALPNLSKLGLIDACEEASNTSCQVAERNAPIAAYGYAKEISSGKDTPSGHWEMAGVPVLFDWGYFHDKQNSFPEAFIEEFIKRANLPGILGNCHSSGTVILESLGEEHMLTGKPICYTSTDSVFQIACHEESFGLERLYEICEIARELLDEYNIGRVIARPFLGDAADNFARTGNRRDYSVLPPAPTLLDKLAADNGAVISIGKISDIYAHQGITEKHKAPGLENLMAKTAEVFGSANDHSLTFVNLVDFDEKFGHRRDAIGYAKALKQLDDYLPEFLALLGKDDVLMITADHGCDPTWQGTDHTREYVPVIAYTPGMNAVNLGERGTFADIGQTLAQWFSLEPLEYGNSFKSQLGS
>NZ_CP009889.1|WP_040134791.1|115767_116394_-|uridine-kinase
MTRTIIAIAGASASGKSLFSQTIYNELVNELAPGAIAIIEEDAYYRDQSHLPFEHRTQTNYDHPDAFEHELLLTHLNQLKAGEPVDIPVYDYAKHTRSDQTRRVQPAKILIVEGILLLSDPQLCEEFNIKVFIDTPLDICLMRRMQRDLEERGRSLQSVIEQYQATVRPMFYQFIDPSKHNADVVVTRGGRNRVAIDILKSKIKQLLQ
>NZ_CP009889.1|WP_040134790.1|114516_115746_-|NupC/NupG-family-nucleoside-CNT-transporter
MTSLMSLVGIASLLAIAFICSTNRKKINLRTVGGAFALQVLIGAFVLYVPAGREVLNSISVGVANVISYANDGIRFLFGGLAGDEIEGIGFVFAIKVLPVIVFFSALVAVLYHLRIMDWIIKILGGGLQKLLGTSKPESLSATANIFVGQTEAPLVVKPFIATMTRSELFAVMVGGLATVAGSILAGYVSLGVELKYLIAASFMAAPGGFLMAKMMVPETETPKQDLNELDSSDEKPVNVIDAAAGGALNGMQLAMNVGAMLLAFVALIALSNGLVGWIGGWFDNPDLTIQQILGYAFAPIAWLLGIPWSEAQLAGSFIGQKLVVNEFVAYLDFMNYQAQLSEHTKAVVTFALCGFANLSSIAILLGGIGGMAPSRRKDIAQLGLRAVLAGSMANLMSAAIAGFFLSIA
>NZ_CP009889.1|WP_081991161.1|113379_114156_+|ABC-transporter-substrate-binding-protein
MSSLFWTTLIYYFIKEVFVLKRIFAASLLVISCSSNAGAIKFGFNQQHYSPYVIHDDNFTSQSGIVFDMSMAIAEEAGFVAKLISLPRKRIEGFLVEGKIDAQCHTNPSWYQHPDLVWSEALYRDSDVVISNHNFASLNEFFDSKGFKLGTVLGYKYPEIAPYFASGNIKRFNSTTSKGSFARFIRGELDGFVTSLTEANYLVQLKRFNVLEINKNQIYCSFSPKLKEEKRKRLLSAAETLKMNGEFERILAKYIKQE
>NZ_CP009889.1|WP_081991159.1|111859_113368_+|VCBS-repeat-containing-protein
MFIHIQGSNMKIITALIVTLGLASTASLAKSKNSLFNEVAIETELTLSQPVYPIDLLPNPGKELMLIGTLDGQQYIDIYGASESALYNRIKRVSVPNSMLGFDVTQWQNAQQQVYLFSAEAIYQLQLEKDQSIERIIDIQTYLKKDNAQHLSKMNFVHNVNVDQKADFLTTDLNASFLYLSDDSGYNKVNLDLPARLVIEGHSAEIDPPRFAFFDTNEDQVSELIGFQNGELKLLPSINSANAQAIKLKDDIMVDDWWHTKDADGESLDQSNLVYRKLERIEDVNHDGIFDLVVRFTKSSGALDRQNDYEIYLGAIESGKIVFQQDTTSLIQDEGTLTDLTFVDINGDKQLEVLVSGFDIGVSQIIGALLSGSISQDVHLFYQNEQGRFSPKNKITREVELSFSISKGRSGSPVVLFADVNGDGKKDWVLSDEQKAVNVYLAKNYRDFERRATKFKTTLPMMGRRVVSADLNQDGKDDLVMSYGRLDEEKMRNTIKILFAQS
>NZ_CP009889.1|WP_040134786.1|109568_111731_-|hypothetical-protein
MKELPEKYYLSHFVEFVTFIKTTSAHLLATAELDFISHFETLNEDAQCMLVRIVNRKSPFIRKDTLTYNEINDSATAINILRKAGFVARISKHTLSDFFSQLNKQDLIDLCASLALDKPVKSATKSKWLNFVLNNQNSGLSYENVKKHPVLTSHIYFAKQSTFSYLLFLYFGHLSGRLNQFSLRDLGVMQTQGVQQQQANFSDIDEAKSAFLHATLFNDIKQADKTDIPSLTTLALKLLETELPIGYLASQKYHHGLYKLAIALIADNTELGERLLSESQHPAAKEKYIRLLYKSGRIALCETLLLDILDDPESETLLLFAEDFYALKFNQKRTSLLTDVLRDSPTPIALDEAYLGHVENGVKDRYIKQKKQCYFTENKLWRALFALTFWHELYQHPESKRANEFSYFPKVLKENSFFHSLESEIKQKLAQLNNKERFINYIATTILEHSGEPNGLFYWHPELSEVLTHFLHHAPINAVHNHLLNMAQLFKELSDGYPDLMIINNGELYFEEIKAPGDSLRRNQLISIKHLINAGFKVKIQRTEWRFNTEQSYVVVDIETTGGKKEHHRITEIGMVRIEQGVITDTWQTLVNPERHIPKMITELTGISNEMVKDAPLFEHIAEKLNTFSQNAIFVAHNVNFDYGFIRQEFARLNQKYTRAKICTVQQARKYLPGHQSYSLGKLCADLNIELKNHHRALDDATAAAKILLHINDVRIKLGE
>NZ_CP009889.1|WP_040136825.1|122627_124235_-|isocitrate-lyase
MATQLTYQQEIDRIATLKEVGEKKWQNINPESAARMRLQNRFQNGLEIARYTADIMRKDMEAYDQDPSQYTQSLGCWHGFIGQQKMISIKKHFQNNTDRRYLYLSGWMVAALRSEFGPLPDQSMHEKTSVAALIEELYTFLRQADARELGGYFRELDAARKAGDSAAEQTALEKINDHKTHVVPIIADIDAGFGNEEATYLLAKKMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHEDFLAKINAVRYAFLELGVDNGVIVARTDSLGAGLTKQIAVSNEPGDLGDQYNAFLDVEEIESTDIKNGDVILNRNGKLVRPKRLPSNLFQFRQGTGEERCVLDCITSLQNGADLLWIETEKPHVGQIGAMVNEIRKVIPNAKLVYNNSPSFNWTLNFRQQVFDAMVEEGKDVSQYNRDQLMSVEYDNTELAVLADEKIRTFQADAAREAGIFHHLITLPTYHTAALSTDNLAKEYFGEQGMLGYVKNVQRQEIRQGIACVKHQNMAGSDMGDDHKEYFSGDAALKAAGEDNTMNQFS
>NZ_CP009889.1|WP_040134800.1|124488_126657_+|malate-synthase-G
MTTRIHHAGLAVDPSLYAFINHQVIPGTGVDVEHFWQGFAKIVSEMTPINRALLVKRDDLQVQIDQYHQAHSNFDFEHYKQFLQQIGYLKEAPNDVTISTQKVEPEIANMAGPQLVVPVSNARFALNAANARWGSLYDALYGTDAISYENGREVGNAYNPVRGNAVIDFGREFLDQALPLSYGSHKDASDYAIVDGKLIVTLNNVSQSGLQSPEQLVGYNGTKQQPKELILQNNGLHIIIQFDENHQIGKQDSAHIKDVVLESALTTIMDCEDSVAAVDAEDKLGVYSNWLGLNKGDLSVEFEKGGKVLTRALNPDKSYVDLSGKEQSLKGRSLMLVRNVGHLMTNPAIIDKNGDEIFEGIMDAVITSLIALHDLRGNGKAGNSRADSINIVKPKMHGPEEVAYANTLFSKVENLLNLPENTLKMGIMDEERRTSVNLAACIFEAKERVIFINTGFLDRTGDEIHTSMLAGPMLPKEQIKAQKWIGAYENNNVDVGLACGLSGKAQIGKGMWPMPDEMAKMLAQKTAHVQSGANTAWVPSPTAATLHALHYHQQDVFSLQQEIKQRVAANVDDILCPPLHPEPKSMTQDDIQNELNNNAQGILGYMVRWVEQGVGCSKVPDINNIGLMEDRATLRISSQHMTNWLCHGICNEKQIVDTLQAMAKVVDKQNEGDENYRNMADNYAQSVAFQAALELVLTGTKQPNGYTEPVLHRRRLEFKAAH
>NZ_CP009889.1|WP_040134802.1|126735_127458_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAFEVRKNAMAKTAAAKTKVNSKYGKEIYVAAKNGGAELDTNLTLKRLIEKAKKDQVPAHVIDKAIEKAKGGAGEDYQPARYEGFGPGNCMVIIDCLTDNPNRTIKDVRLAFTKTNSKIGGPGTAAHSFDHQAVFAFAGDNDEEVLEALMMADVDVTDVEVEDGVVSVFAPHTEFFNVKTALADAFPDVKLDVEEITFVPQTNVDIEGDDIPLFQKFMDMLNDSDDVQNIYHNAIVKD
>NZ_CP009889.1|WP_040134803.1|127756_128563_-|hypothetical-protein
MTLHGFEIKLGQNYSDLPLDQSGTLTSVAPGGTSISLAHDINDSFRLSLDYIDWDKTHISGKLNDLTIDSTSYAATLSYFVDNFALSANYTYWQSDYSEILIDLPIVKQSTYAPSYGVSLGYGIFWQDWVIEPAISLQYNEWRYRDKLVNNDLGFSLSDSLEDESVVISGLLSASKVVQMTEEEYLLIGGIMRWNALFHGDGPEKPEGVLSFAGRQSHTVNSDDDFAELSFFITYDITAQWMIELDTSVAFLPQDNYSSFSWRVGYRF
>NZ_CP009889.1|WP_040134805.1|128786_129029_+|hypothetical-protein
MEYFILAKNREIAAIPADRKLFLTYQKLGYRFVEKTQSCDEKTALANAQRKYNHTRNYKLIFSLVTVFLAYWLYFYLLLA
>NZ_CP009889.1|WP_040134807.1|129280_129514_+|hypothetical-protein
MDFYILKKGDELKAIPADKAICKSYEKSGYSYIDKVAACTEQAAINKLKGKTFETLKGPLIRLSVVIFALALLWWVS
>NZ_CP009889.1|WP_040134809.1|129535_130159_-|lytic-transglycosylase-domain-containing-protein
MNNKLLALLLCFAFSVSAKPIYQYVKSDGSIAFTDRKPVKHSYSIYRTGCYACQLRSSLNWHKIPIYPDKYHLEIAKASKQHNVDPALVRAMIHAESAFKANARSKKGAIGLMQLMPATAKYMGVKRPNLPAQNIFGGVKYLSYLLDKFNGNVRLATAAYNAGPSTIKKYKGIPPFAETKAYVERVGILHNRYRVALNKKKRKISPS
>NZ_CP009889.1|WP_040134810.1|130370_132269_-|beta-ketoacyl-synthase
MTALPIVVGMGGINAAGRTSGHQGFRRIVLDKLTQEARQETFLGLATLMNLVRQENGALIDHENQPITASNIESKYGEQILAGTLIRKIEDNHFDVDATHGHQKMTVLPAEGEQIVFETSARHLPTPLPRDWHVESLESGKVKVSISGELSLKHDTFRDNPIKAAGQFPTGFDPSTLYNSRYQPRGLQATIFAATDAIKSTGLDWDAVLAVVDPDQIGTYSASVAGQMQEEAFGGMMKNRLKGDRVSTKNLALGLNTMSTDFINAYVTGNVGTTFTTSGACATFLYNLRAAVHDIKAGRTRVAIVGSVDCAITPEIVEGFGNMSALANVDGLKKLDNSDTPDLRRTSRPFGENCGFTIGEGAQFAVLMDDTLALELGADVMGSVPDVFVNADGIKKSITAPGPGNYITMAKSVALASSILGEEAVQKRSYILAHGSSTPQNRVTESIIYDRVAKAFNIDNWKLAAPKAFVGHTIGPASGDQMAMALGIFSHNIMPGITTINKVADDVFADRLDIRTEHYACESQDIAFINSKGFGGNNATAPMFSASVTLDMLTKRHGETAMANYRDKLTTTKQQQDAYSDAANSGDYQLIYRFGDGLIDENEIELTQEILSLPGFAQSVKLKATNPFDDMV
>NZ_CP009889.1|WP_040134812.1|132397_133390_+|helix-turn-helix-domain-containing-protein
MTKMTKVRLLLYPQVLATSVTLPVEMLKAGDASNYKRHGTSLDIKFVSTEQTIIKCRAGCAFVPDLTVNNDDEADFIIVPGIWRNPRPVIKHNQTAISYLARQWQQGATIVGVGTGNCLLAEAGLLDNHAATTHWHYAKQFRKDYPRVNLKPEFFITQSERIFCAASLNSLADIMVHLIAQLYGREAAQNVERNFSHEIRKPYEEQRYLEGAVDRHPDELIAQIQFWLKNNLTSDFSLHDVAEQFGISQRTLSRRFKAATGSTANHYLQKMRLEMAQELLSSTNLTVQDVAVEVGYIDQGYLTKVFKRELNQTPSDYRLLVRKKLFKTDS
>NZ_CP009889.1|WP_040134814.1|133987_135799_+|S8-family-serine-peptidase
MKIKTPLLAASLIIACTPAIAKITDSTFPLVTGDPLVSQQWHLQNTGQTGFSQSSGVAGNDLDLDFTHLMGIKGRGITVSIIDSGVEIDHPDLRTNVVDGSINLGDGSNYPQDDDGHGTSVSGLIAATEANGLGGRGVAPHANIIGFNYLPNQTVGNWLVAHGLSEDFRQLDRFTDPRVFNQSYGSTPASPRVHDYSLDPWQELQDSVYQDITENSHWGRGSVYVKSAGNSFEVYNAFYRGYRILVLPYENNQFFNNQGLPFHNANISSDNTNHWNLVVSALNAEGKLSSYSSVGSNVFVAAPGGEFGEAAPAMVTIDLQGCDAGSNVAGEHGNALHGGSELDPNCDYTGTMNGTSSAAPNTSGAIANIMSANHALDARAIRHILAQTARKTDVEHPGVDLTFENANGELVTYNAIPAWQTNAAGYNFHQYYGFGAVDVDDAVYKALFTPAAPLPEQVITPWQLQTANVEIPDASLVGATSALSFEQDVTVEAVQVKLNIDHSRLRDLAIELISPSGTRSILMSARTGWLSSTQGGYTDTLLLSNHFYGESAKGEWQLKVIDTDKGNSFTLGYNAAIGLIGFNRDNNTENGMLKDWSLRVIGH

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Crispr_ID: NZ_CP009889_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009889_2

122426-122492

Orphan

Consensus_repeat	Method
TAGTTAGTAAAATTATGATCTTTA	CRISPRCasFinder

1 spacers

DEDDh

The CRISPR arrays of NZ_CP009889_2

>merge|NZ_CP009889|2|122426-122492|CRISPRCasFinder
TAGCTAGTAAAATAGCGATCTGTGATTATTGCTAACCATATGTTACTTAGTAAAAATATGATCTGAT

>NZ_CP009889|2|2|122426-122492|CRISPRCasFinder
TAGCTAGTAAAATAGCGATCTGTG	ATTATTGCTAACCATATGT
TACTTAGTAAAAATATGATCTGAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009889.1\|WP_040134814.1\|133987_135799_+\|S8-family-serine-peptidase	unknown	unknown	gnl\|CDD\|173789
NZ_CP009889.1\|WP_040134793.1\|116666_117878_+\|phosphopentomutase	unknown	unknown	gnl\|CDD\|235430
NZ_CP009889.1\|WP_040134795.1\|117894_118596_+\|purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|180275
NZ_CP009889.1\|WP_040134803.1\|127756_128563_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009889.1\|WP_040134796.1\|119313_120987_+\|OmpA-family-protein	unknown	unknown	gnl\|CDD\|270371
NZ_CP009889.1\|WP_040134810.1\|130370_132269_-\|beta-ketoacyl-synthase	unknown	unknown	gnl\|CDD\|238424
NZ_CP009889.1\|WP_040134786.1\|109568_111731_-\|hypothetical-protein	DEDDh	cd06127_DEDDh_CAS-I	gnl\|CDD\|176648
NZ_CP009889.1\|WP_040134812.1\|132397_133390_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|227311
NZ_CP009889.1\|WP_040134802.1\|126735_127458_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	unknown	unknown	gnl\|CDD\|237084
NZ_CP009889.1\|WP_052141085.1\|118817_119153_+\|DUF3718-domain-containing-protein	unknown	unknown	gnl\|CDD\|378871
NZ_CP009889.1\|WP_040134800.1\|124488_126657_+\|malate-synthase-G	unknown	unknown	gnl\|CDD\|235097
NZ_CP009889.1\|WP_040134809.1\|129535_130159_-\|lytic-transglycosylase-domain-containing-protein	unknown	unknown	gnl\|CDD\|381594
NZ_CP009889.1\|WP_040134807.1\|129280_129514_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009889.1\|WP_040134791.1\|115767_116394_-\|uridine-kinase	unknown	unknown	gnl\|CDD\|235492
NZ_CP009889.1\|WP_040134798.1\|121249_121834_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009889.1\|WP_040134805.1\|128786_129029_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009889.1\|WP_040134790.1\|114516_115746_-\|NupC/NupG-family-nucleoside-CNT-transporter	unknown	unknown	gnl\|CDD\|224883
NZ_CP009889.1\|WP_081991159.1\|111859_113368_+\|VCBS-repeat-containing-protein	unknown	unknown	gnl\|CDD\|379232
NZ_CP009889.1\|WP_081991161.1\|113379_114156_+\|ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223904
NZ_CP009889.1\|WP_040136825.1\|122627_124235_-\|isocitrate-lyase	unknown	unknown	gnl\|CDD\|180592

Protein	Function_ID	Function_description	E-value
NZ_CP009889.1\|WP_040134793.1\|116666_117878_+\|phosphopentomutase	gnl\|CDD\|235430	PRK05362, PRK05362, phosphopentomutase; Provisional.	0
NZ_CP009889.1\|WP_040134795.1\|117894_118596_+\|purine-nucleoside-phosphorylase	gnl\|CDD\|180275	PRK05819, deoD, DeoD-type purine-nucleoside phosphorylase.	5.96036e-147
NZ_CP009889.1\|WP_040134796.1\|119313_120987_+\|OmpA-family-protein	gnl\|CDD\|270371	cd13653, PBP2_phosphate_like_1, Substrate binding domain of putative ABC-type phosphate transporter, a member of the type 2 periplasmic binding fold superfamily. This subfamily contains uncharacterized phosphate binding domains found in PstS proteins that serve as initial receptors in the ABC transport of phosphate in eubacteria and archaea. After binding the ligand, PstS interacts with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis. The PstS proteins belong to the PBP2 superfamily of periplasmic binding proteins that differ in size and ligand specificity, but have similar tertiary structures consisting of two globular subdomains connected by a flexible hinge. They have been shown to bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap.	9.20014e-71
NZ_CP009889.1\|WP_040134810.1\|130370_132269_-\|beta-ketoacyl-synthase	gnl\|CDD\|238424	cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.	2.9605e-78
NZ_CP009889.1\|WP_040134786.1\|109568_111731_-\|hypothetical-protein	gnl\|CDD\|176648	cd06127, DEDDh, DEDDh 3'-5' exonuclease domain family. DEDDh exonucleases, part of the DnaQ-like (or DEDD) exonuclease superfamily, catalyze the excision of nucleoside monophosphates at the DNA or RNA termini in the 3'-5' direction. These proteins contain four invariant acidic residues in three conserved sequence motifs termed ExoI, ExoII and ExoIII. DEDDh exonucleases are classified as such because of the presence of specific Hx(4)D conserved pattern at the ExoIII motif. The four conserved acidic residues are clustered around the active site and serve as ligands for the two metal ions required for catalysis. Most DEDDh exonucleases are the proofreading subunits (epsilon) or domains of bacterial DNA polymerase III, the main replicating enzyme in bacteria, which functions as the chromosomal replicase. Other members include other DNA and RNA exonucleases such as RNase T, Oligoribonuclease, and RNA exonuclease (REX), among others.	3.85572e-52
NZ_CP009889.1\|WP_040134812.1\|132397_133390_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|227311	COG4977, COG4977, Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain [Transcription].	2.89517e-66
NZ_CP009889.1\|WP_040134802.1\|126735_127458_-\|YebC/PmpR-family-DNA-binding-transcriptional-regulator	gnl\|CDD\|237084	PRK12378, PRK12378, YebC/PmpR family DNA-binding transcriptional regulator.	1.0437e-127
NZ_CP009889.1\|WP_052141085.1\|118817_119153_+\|DUF3718-domain-containing-protein	gnl\|CDD\|378871	pfam12514, DUF3718, Protein of unknown function (DUF3718). This domain family is found in bacteria and viruses, and is approximately 70 amino acids in length. There is a single completely conserved residue C that may be functionally important.	4.36282e-15
NZ_CP009889.1\|WP_040134800.1\|124488_126657_+\|malate-synthase-G	gnl\|CDD\|235097	PRK02999, PRK02999, malate synthase G; Provisional.	0
NZ_CP009889.1\|WP_040134809.1\|129535_130159_-\|lytic-transglycosylase-domain-containing-protein	gnl\|CDD\|381594	cd00254, LT-like, lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.	1.86769e-47
NZ_CP009889.1\|WP_040134791.1\|115767_116394_-\|uridine-kinase	gnl\|CDD\|235492	PRK05480, PRK05480, uridine/cytidine kinase; Provisional.	9.96156e-128
NZ_CP009889.1\|WP_040134814.1\|133987_135799_+\|S8-family-serine-peptidase	gnl\|CDD\|173789	cd04059, Peptidases_S8_Protein_convertases_Kexins_Furin-like, Peptidase S8 family domain in Protein convertases. Protein convertases, whose members include furins and kexins, are members of the peptidase S8 or Subtilase clan of proteases. They have an Asp/His/Ser catalytic triad that is not homologous to trypsin. Kexins are involved in the activation of peptide hormones, growth factors, and viral proteins. Furin cleaves cell surface vasoactive peptides and proteins involved in cardiovascular tissue remodeling in the TGN, at cell surface, or in endosomes but rarely in the ER. Furin also plays a key role in blood pressure regulation though the activation of transforming growth factor (TGF)-beta. High specificity is seen for cleavage after dibasic (Lys-Arg or Arg-Arg) or multiple basic residues in protein convertases. There is also strong sequence conservation.	7.8923e-95
NZ_CP009889.1\|WP_040134790.1\|114516_115746_-\|NupC/NupG-family-nucleoside-CNT-transporter	gnl\|CDD\|224883	COG1972, NupC, Nucleoside permease [Nucleotide transport and metabolism].	0
NZ_CP009889.1\|WP_081991159.1\|111859_113368_+\|VCBS-repeat-containing-protein	gnl\|CDD\|379232	pfam13517, VCBS, Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella. This domain of about 100 residues is found in multiple (up to 35) copies in long proteins from several species of Vibrio, Colwellia, Bradyrhizobium, and Shewanella (hence the name VCBS) and in smaller copy numbers in proteins from several other bacteria. The large protein size and repeat copy numbers, species distribution, and suggested activities of several member proteins suggests a role for this domain in adhesion (TIGR).	2.28143e-05
NZ_CP009889.1\|WP_081991161.1\|113379_114156_+\|ABC-transporter-substrate-binding-protein	gnl\|CDD\|223904	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms].	8.42686e-11
NZ_CP009889.1\|WP_040136825.1\|122627_124235_-\|isocitrate-lyase	gnl\|CDD\|180592	PRK06498, PRK06498, isocitrate lyase; Provisional.	0

>NZ_CP009889.1|WP_040134798.1|121249_121834_+|hypothetical-protein
MEALKVKNNIDQAIDALSLPSAELLEEMQALGIELPDKPSVSKKVDLTTINSTVLTTHLTELFLDKNKLLKTFSEFSLSEQVALRAFLYNLIPMLHLPPASIIEKMQQEGVFDVLIGEQDKAQAVKDKIAALNAEKEQNKLNAVKERLAKLSDTPKQCADELKIARVKSNLNKATSQTQTAELIDIKSKIAQLG
>NZ_CP009889.1|WP_040134796.1|119313_120987_+|OmpA-family-protein
MEHEKTLLIDQIISTAKREFDIDLVKEKLLSEEEYRTLVFTELNSLENAELNRLIGSFNQANQTQPSASSRDEVLDSKRNKGLLIAASVAVITLSVIGAWFGLSGKSEQPNKVVAVPAKVVSQKSPEMTKPKAIEAEPEQIFKPLFAIHGSNTIGEKLAPALLKAYFEEQGASDIDWQQGGIATERTMQFDMDGEKLAIGLAAHGSSTAFKALNANMAQIGMSSRKIKTSEIEALKGQSGDLSKLGNEHIIALDGLAIIVNQNNPLKAITTETLSRIFSGEISNWAEIGGEQAPIKVLARDNNSGTFDTFKSLVLKKYGRKLTASAERFESSSELSERVSQDDFAIGFIGLNYIRYSKALAIADSNETKAIYPTRFTIATEDYPLARRLYLYTPTNSATQIKDFANFAISDRGQEIVQSLGLISQSIRVEDVASSELAPDKYNQYAKLAKRLSLNFRFNYATRDLDNKGKRDLQRLVSFVEQNPSKKLVLMGFSDSIGARDKNTLLSLSRAKSVEQELNARGINVYAVEGFGEDMPLANNDNEVGRERNRRVEVWVL
>NZ_CP009889.1|WP_052141085.1|118817_119153_+|DUF3718-domain-containing-protein
MKALALTAVSVSLLAVPTMATAFNKSTIESVLVQTCKDVKSNKVYKLKANLKENHLRVHVINEKLMCNGESVYDFAMTHNADKTAKMLRTGSVSIQDVALNNADKIWVWLD
>NZ_CP009889.1|WP_040134795.1|117894_118596_+|purine-nucleoside-phosphorylase
MSTPHINAQLNDFAETVLMPGDPLRAKHIAETFLDDAREVTSVRNILGYTGTYNGKPVSIMASGMGIPSMSIYARELIVSYGVKNLIRIGTCGGIGSDIKIRDVIFAQGASTDSNVNRARVQGYDFAAIADFDLLVNGVEAAKRLGISAKVGNVFTTDTFYQASTDLYQQLDKLGVLAVDMETAGLYGVAAEYGANAMALFTVSDHVITGEATPSEERQNSFNEMVKIALESI
>NZ_CP009889.1|WP_040134793.1|116666_117878_+|phosphopentomutase
MARALILMADSLGIGAAPDAESFGDKGANTLAHLLAAYHGETGQKLALPNLSKLGLIDACEEASNTSCQVAERNAPIAAYGYAKEISSGKDTPSGHWEMAGVPVLFDWGYFHDKQNSFPEAFIEEFIKRANLPGILGNCHSSGTVILESLGEEHMLTGKPICYTSTDSVFQIACHEESFGLERLYEICEIARELLDEYNIGRVIARPFLGDAADNFARTGNRRDYSVLPPAPTLLDKLAADNGAVISIGKISDIYAHQGITEKHKAPGLENLMAKTAEVFGSANDHSLTFVNLVDFDEKFGHRRDAIGYAKALKQLDDYLPEFLALLGKDDVLMITADHGCDPTWQGTDHTREYVPVIAYTPGMNAVNLGERGTFADIGQTLAQWFSLEPLEYGNSFKSQLGS
>NZ_CP009889.1|WP_040134791.1|115767_116394_-|uridine-kinase
MTRTIIAIAGASASGKSLFSQTIYNELVNELAPGAIAIIEEDAYYRDQSHLPFEHRTQTNYDHPDAFEHELLLTHLNQLKAGEPVDIPVYDYAKHTRSDQTRRVQPAKILIVEGILLLSDPQLCEEFNIKVFIDTPLDICLMRRMQRDLEERGRSLQSVIEQYQATVRPMFYQFIDPSKHNADVVVTRGGRNRVAIDILKSKIKQLLQ
>NZ_CP009889.1|WP_040134790.1|114516_115746_-|NupC/NupG-family-nucleoside-CNT-transporter
MTSLMSLVGIASLLAIAFICSTNRKKINLRTVGGAFALQVLIGAFVLYVPAGREVLNSISVGVANVISYANDGIRFLFGGLAGDEIEGIGFVFAIKVLPVIVFFSALVAVLYHLRIMDWIIKILGGGLQKLLGTSKPESLSATANIFVGQTEAPLVVKPFIATMTRSELFAVMVGGLATVAGSILAGYVSLGVELKYLIAASFMAAPGGFLMAKMMVPETETPKQDLNELDSSDEKPVNVIDAAAGGALNGMQLAMNVGAMLLAFVALIALSNGLVGWIGGWFDNPDLTIQQILGYAFAPIAWLLGIPWSEAQLAGSFIGQKLVVNEFVAYLDFMNYQAQLSEHTKAVVTFALCGFANLSSIAILLGGIGGMAPSRRKDIAQLGLRAVLAGSMANLMSAAIAGFFLSIA
>NZ_CP009889.1|WP_081991161.1|113379_114156_+|ABC-transporter-substrate-binding-protein
MSSLFWTTLIYYFIKEVFVLKRIFAASLLVISCSSNAGAIKFGFNQQHYSPYVIHDDNFTSQSGIVFDMSMAIAEEAGFVAKLISLPRKRIEGFLVEGKIDAQCHTNPSWYQHPDLVWSEALYRDSDVVISNHNFASLNEFFDSKGFKLGTVLGYKYPEIAPYFASGNIKRFNSTTSKGSFARFIRGELDGFVTSLTEANYLVQLKRFNVLEINKNQIYCSFSPKLKEEKRKRLLSAAETLKMNGEFERILAKYIKQE
>NZ_CP009889.1|WP_081991159.1|111859_113368_+|VCBS-repeat-containing-protein
MFIHIQGSNMKIITALIVTLGLASTASLAKSKNSLFNEVAIETELTLSQPVYPIDLLPNPGKELMLIGTLDGQQYIDIYGASESALYNRIKRVSVPNSMLGFDVTQWQNAQQQVYLFSAEAIYQLQLEKDQSIERIIDIQTYLKKDNAQHLSKMNFVHNVNVDQKADFLTTDLNASFLYLSDDSGYNKVNLDLPARLVIEGHSAEIDPPRFAFFDTNEDQVSELIGFQNGELKLLPSINSANAQAIKLKDDIMVDDWWHTKDADGESLDQSNLVYRKLERIEDVNHDGIFDLVVRFTKSSGALDRQNDYEIYLGAIESGKIVFQQDTTSLIQDEGTLTDLTFVDINGDKQLEVLVSGFDIGVSQIIGALLSGSISQDVHLFYQNEQGRFSPKNKITREVELSFSISKGRSGSPVVLFADVNGDGKKDWVLSDEQKAVNVYLAKNYRDFERRATKFKTTLPMMGRRVVSADLNQDGKDDLVMSYGRLDEEKMRNTIKILFAQS
>NZ_CP009889.1|WP_040134786.1|109568_111731_-|hypothetical-protein
MKELPEKYYLSHFVEFVTFIKTTSAHLLATAELDFISHFETLNEDAQCMLVRIVNRKSPFIRKDTLTYNEINDSATAINILRKAGFVARISKHTLSDFFSQLNKQDLIDLCASLALDKPVKSATKSKWLNFVLNNQNSGLSYENVKKHPVLTSHIYFAKQSTFSYLLFLYFGHLSGRLNQFSLRDLGVMQTQGVQQQQANFSDIDEAKSAFLHATLFNDIKQADKTDIPSLTTLALKLLETELPIGYLASQKYHHGLYKLAIALIADNTELGERLLSESQHPAAKEKYIRLLYKSGRIALCETLLLDILDDPESETLLLFAEDFYALKFNQKRTSLLTDVLRDSPTPIALDEAYLGHVENGVKDRYIKQKKQCYFTENKLWRALFALTFWHELYQHPESKRANEFSYFPKVLKENSFFHSLESEIKQKLAQLNNKERFINYIATTILEHSGEPNGLFYWHPELSEVLTHFLHHAPINAVHNHLLNMAQLFKELSDGYPDLMIINNGELYFEEIKAPGDSLRRNQLISIKHLINAGFKVKIQRTEWRFNTEQSYVVVDIETTGGKKEHHRITEIGMVRIEQGVITDTWQTLVNPERHIPKMITELTGISNEMVKDAPLFEHIAEKLNTFSQNAIFVAHNVNFDYGFIRQEFARLNQKYTRAKICTVQQARKYLPGHQSYSLGKLCADLNIELKNHHRALDDATAAAKILLHINDVRIKLGE
>NZ_CP009889.1|WP_040136825.1|122627_124235_-|isocitrate-lyase
MATQLTYQQEIDRIATLKEVGEKKWQNINPESAARMRLQNRFQNGLEIARYTADIMRKDMEAYDQDPSQYTQSLGCWHGFIGQQKMISIKKHFQNNTDRRYLYLSGWMVAALRSEFGPLPDQSMHEKTSVAALIEELYTFLRQADARELGGYFRELDAARKAGDSAAEQTALEKINDHKTHVVPIIADIDAGFGNEEATYLLAKKMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHEDFLAKINAVRYAFLELGVDNGVIVARTDSLGAGLTKQIAVSNEPGDLGDQYNAFLDVEEIESTDIKNGDVILNRNGKLVRPKRLPSNLFQFRQGTGEERCVLDCITSLQNGADLLWIETEKPHVGQIGAMVNEIRKVIPNAKLVYNNSPSFNWTLNFRQQVFDAMVEEGKDVSQYNRDQLMSVEYDNTELAVLADEKIRTFQADAAREAGIFHHLITLPTYHTAALSTDNLAKEYFGEQGMLGYVKNVQRQEIRQGIACVKHQNMAGSDMGDDHKEYFSGDAALKAAGEDNTMNQFS
>NZ_CP009889.1|WP_040134800.1|124488_126657_+|malate-synthase-G
MTTRIHHAGLAVDPSLYAFINHQVIPGTGVDVEHFWQGFAKIVSEMTPINRALLVKRDDLQVQIDQYHQAHSNFDFEHYKQFLQQIGYLKEAPNDVTISTQKVEPEIANMAGPQLVVPVSNARFALNAANARWGSLYDALYGTDAISYENGREVGNAYNPVRGNAVIDFGREFLDQALPLSYGSHKDASDYAIVDGKLIVTLNNVSQSGLQSPEQLVGYNGTKQQPKELILQNNGLHIIIQFDENHQIGKQDSAHIKDVVLESALTTIMDCEDSVAAVDAEDKLGVYSNWLGLNKGDLSVEFEKGGKVLTRALNPDKSYVDLSGKEQSLKGRSLMLVRNVGHLMTNPAIIDKNGDEIFEGIMDAVITSLIALHDLRGNGKAGNSRADSINIVKPKMHGPEEVAYANTLFSKVENLLNLPENTLKMGIMDEERRTSVNLAACIFEAKERVIFINTGFLDRTGDEIHTSMLAGPMLPKEQIKAQKWIGAYENNNVDVGLACGLSGKAQIGKGMWPMPDEMAKMLAQKTAHVQSGANTAWVPSPTAATLHALHYHQQDVFSLQQEIKQRVAANVDDILCPPLHPEPKSMTQDDIQNELNNNAQGILGYMVRWVEQGVGCSKVPDINNIGLMEDRATLRISSQHMTNWLCHGICNEKQIVDTLQAMAKVVDKQNEGDENYRNMADNYAQSVAFQAALELVLTGTKQPNGYTEPVLHRRRLEFKAAH
>NZ_CP009889.1|WP_040134802.1|126735_127458_-|YebC/PmpR-family-DNA-binding-transcriptional-regulator
MGRAFEVRKNAMAKTAAAKTKVNSKYGKEIYVAAKNGGAELDTNLTLKRLIEKAKKDQVPAHVIDKAIEKAKGGAGEDYQPARYEGFGPGNCMVIIDCLTDNPNRTIKDVRLAFTKTNSKIGGPGTAAHSFDHQAVFAFAGDNDEEVLEALMMADVDVTDVEVEDGVVSVFAPHTEFFNVKTALADAFPDVKLDVEEITFVPQTNVDIEGDDIPLFQKFMDMLNDSDDVQNIYHNAIVKD
>NZ_CP009889.1|WP_040134803.1|127756_128563_-|hypothetical-protein
MTLHGFEIKLGQNYSDLPLDQSGTLTSVAPGGTSISLAHDINDSFRLSLDYIDWDKTHISGKLNDLTIDSTSYAATLSYFVDNFALSANYTYWQSDYSEILIDLPIVKQSTYAPSYGVSLGYGIFWQDWVIEPAISLQYNEWRYRDKLVNNDLGFSLSDSLEDESVVISGLLSASKVVQMTEEEYLLIGGIMRWNALFHGDGPEKPEGVLSFAGRQSHTVNSDDDFAELSFFITYDITAQWMIELDTSVAFLPQDNYSSFSWRVGYRF
>NZ_CP009889.1|WP_040134805.1|128786_129029_+|hypothetical-protein
MEYFILAKNREIAAIPADRKLFLTYQKLGYRFVEKTQSCDEKTALANAQRKYNHTRNYKLIFSLVTVFLAYWLYFYLLLA
>NZ_CP009889.1|WP_040134807.1|129280_129514_+|hypothetical-protein
MDFYILKKGDELKAIPADKAICKSYEKSGYSYIDKVAACTEQAAINKLKGKTFETLKGPLIRLSVVIFALALLWWVS
>NZ_CP009889.1|WP_040134809.1|129535_130159_-|lytic-transglycosylase-domain-containing-protein
MNNKLLALLLCFAFSVSAKPIYQYVKSDGSIAFTDRKPVKHSYSIYRTGCYACQLRSSLNWHKIPIYPDKYHLEIAKASKQHNVDPALVRAMIHAESAFKANARSKKGAIGLMQLMPATAKYMGVKRPNLPAQNIFGGVKYLSYLLDKFNGNVRLATAAYNAGPSTIKKYKGIPPFAETKAYVERVGILHNRYRVALNKKKRKISPS
>NZ_CP009889.1|WP_040134810.1|130370_132269_-|beta-ketoacyl-synthase
MTALPIVVGMGGINAAGRTSGHQGFRRIVLDKLTQEARQETFLGLATLMNLVRQENGALIDHENQPITASNIESKYGEQILAGTLIRKIEDNHFDVDATHGHQKMTVLPAEGEQIVFETSARHLPTPLPRDWHVESLESGKVKVSISGELSLKHDTFRDNPIKAAGQFPTGFDPSTLYNSRYQPRGLQATIFAATDAIKSTGLDWDAVLAVVDPDQIGTYSASVAGQMQEEAFGGMMKNRLKGDRVSTKNLALGLNTMSTDFINAYVTGNVGTTFTTSGACATFLYNLRAAVHDIKAGRTRVAIVGSVDCAITPEIVEGFGNMSALANVDGLKKLDNSDTPDLRRTSRPFGENCGFTIGEGAQFAVLMDDTLALELGADVMGSVPDVFVNADGIKKSITAPGPGNYITMAKSVALASSILGEEAVQKRSYILAHGSSTPQNRVTESIIYDRVAKAFNIDNWKLAAPKAFVGHTIGPASGDQMAMALGIFSHNIMPGITTINKVADDVFADRLDIRTEHYACESQDIAFINSKGFGGNNATAPMFSASVTLDMLTKRHGETAMANYRDKLTTTKQQQDAYSDAANSGDYQLIYRFGDGLIDENEIELTQEILSLPGFAQSVKLKATNPFDDMV
>NZ_CP009889.1|WP_040134812.1|132397_133390_+|helix-turn-helix-domain-containing-protein
MTKMTKVRLLLYPQVLATSVTLPVEMLKAGDASNYKRHGTSLDIKFVSTEQTIIKCRAGCAFVPDLTVNNDDEADFIIVPGIWRNPRPVIKHNQTAISYLARQWQQGATIVGVGTGNCLLAEAGLLDNHAATTHWHYAKQFRKDYPRVNLKPEFFITQSERIFCAASLNSLADIMVHLIAQLYGREAAQNVERNFSHEIRKPYEEQRYLEGAVDRHPDELIAQIQFWLKNNLTSDFSLHDVAEQFGISQRTLSRRFKAATGSTANHYLQKMRLEMAQELLSSTNLTVQDVAVEVGYIDQGYLTKVFKRELNQTPSDYRLLVRKKLFKTDS
>NZ_CP009889.1|WP_040134814.1|133987_135799_+|S8-family-serine-peptidase
MKIKTPLLAASLIIACTPAIAKITDSTFPLVTGDPLVSQQWHLQNTGQTGFSQSSGVAGNDLDLDFTHLMGIKGRGITVSIIDSGVEIDHPDLRTNVVDGSINLGDGSNYPQDDDGHGTSVSGLIAATEANGLGGRGVAPHANIIGFNYLPNQTVGNWLVAHGLSEDFRQLDRFTDPRVFNQSYGSTPASPRVHDYSLDPWQELQDSVYQDITENSHWGRGSVYVKSAGNSFEVYNAFYRGYRILVLPYENNQFFNNQGLPFHNANISSDNTNHWNLVVSALNAEGKLSSYSSVGSNVFVAAPGGEFGEAAPAMVTIDLQGCDAGSNVAGEHGNALHGGSELDPNCDYTGTMNGTSSAAPNTSGAIANIMSANHALDARAIRHILAQTARKTDVEHPGVDLTFENANGELVTYNAIPAWQTNAAGYNFHQYYGFGAVDVDDAVYKALFTPAAPLPEQVITPWQLQTANVEIPDASLVGATSALSFEQDVTVEAVQVKLNIDHSRLRDLAIELISPSGTRSILMSARTGWLSSTQGGYTDTLLLSNHFYGESAKGEWQLKVIDTDKGNSFTLGYNAAIGLIGFNRDNNTENGMLKDWSLRVIGH

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	MK327932	Escherichia phage vB_EcoM_G2248, complete genome	89980-90007	5	0.821
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	MT840189	Bacteriophage sp. Joined_contig_348 genomic sequence	11347-11374	6	0.786
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NC_017232	Borreliella afzelii PKo plasmid lp17, complete sequence	23501-23528	6	0.786
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	436367-436394	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NZ_CP011350	Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence	755875-755902	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NZ_CP013056	Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence	75428-75455	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NZ_AP014866	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence	55541-55568	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NZ_CP004876	Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence	90110-90137	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NC_017203	Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence	127268-127295	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NC_020384	Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence	131492-131519	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NZ_CP015152	Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence	127158-127185	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NZ_CP004861	Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence	89842-89869	7	0.75
NZ_CP009889_1	1.3\|122201\|28\|NZ_CP009889\|CRISPRCasFinder	122201-122228	28	NZ_CP010091	Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence	84115-84142	7	0.75

1. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to MK327932 (Escherichia phage vB_EcoM_G2248, complete genome) position: , mismatch: 5, identity: 0.821

ggttgataaatacccttaattttaactt	CRISPR spacer
gggataaaaatacccttaattttacctt	Protospacer
**   * ***************** ***

2. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to MT840189 (Bacteriophage sp. Joined_contig_348 genomic sequence) position: , mismatch: 6, identity: 0.786

ggttgataaatacccttaattttaactt	CRISPR spacer
tgttgataaattccattaattttaataa	Protospacer
 ********** ** **********.

3. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NC_017232 (Borreliella afzelii PKo plasmid lp17, complete sequence) position: , mismatch: 6, identity: 0.786

ggttgataaatacccttaattttaactt	CRISPR spacer
ttctaataaaaacccttaattttaattt	Protospacer
  .*.***** **************.**

4. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

5. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NZ_CP011350 (Bacillus thuringiensis strain YC-10 plasmid pYC1, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

6. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NZ_CP013056 (Bacillus thuringiensis strain YWC2-8 plasmid pYWC2-8-1, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

7. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NZ_AP014866 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK2, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

8. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NZ_CP004876 (Bacillus thuringiensis serovar kurstaki str. HD-1 plasmid pBMB299, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

9. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NC_017203 (Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT281, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

10. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NC_020384 (Bacillus thuringiensis serovar thuringiensis str. IS5056 plasmid pIS56-285, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

11. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NZ_CP015152 (Bacillus thuringiensis strain Bc601 plasmid pBTBC2, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

12. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NZ_CP004861 (Bacillus thuringiensis serovar kurstaki str. YBT-1520 plasmid pBMB293, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

13. spacer 1.3|122201|28|NZ_CP009889|CRISPRCasFinder matches to NZ_CP010091 (Bacillus thuringiensis serovar galleriae strain 4G5 plasmid pBMB267, complete sequence) position: , mismatch: 7, identity: 0.75

ggttgataaatacccttaattttaactt	CRISPR spacer
tattgataaaaaccctttattttaaagg	Protospacer
 .******** ****** *******

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP009888

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP009888_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP009888_1

922909-923164

Orphan

Consensus_repeat	Method
TGGTGCCCAACGCGTATCAAATCGGCTCCCGCAACCATTTCTTGTTTTTCCCTTAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP009888_1

>merge|NZ_CP009888|1|922909-923164|PILER-CR
GTGCCTAACGCGTATCAAATCCGGCTCCCGCAACCATTTCTTGTTTTTCTCTTATAATCCTAATTTAATAATCAAACTTACTTTGCCCTACGGTCGTCGTTGGTGCCCAACGCGTATCAAATCGGCTCCCGCAACTATTTCTTATTTTTCCATATAATTCAAATTTATTAATCAAGTATATTTCGCCCTACGGTCGTCGTTGGTGCCCAACGCATATCAAATCGGCTCCCGCAACCATTTCTTGTTTTTCCCTTAT

>NZ_CP009888|1|1|922909-923164|PILER-CR
GTGCCTAACGCGTATCAAATCCGGCTCCCGCAACCATTTCTTGTTTTTCTCTTATAA	TCCTAATTTAATAATCAAACTTACTTTGCCCTACGGTCGTCGTTG
GTGCCCAACGCGTATCAAATCGGCTCCCGCAACTATTTCTTATTTTTCCATATAATT	CAAATTTATTAATCAAGTATATTTCGCCCTACGGTCGTCGTTGGTGC
CCAACGCATATCAAATCGGCTCCCGCAACCATTTCTTGTTTTTCCCTTAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP009888.1\|WP_038639108.1\|916260_918591_+\|fatty-acid-cis/trans-isomerase	unknown	unknown	gnl\|CDD\|369142
NZ_CP009888.1\|WP_081991004.1\|927376_927865_-\|TIGR02444-family-protein	unknown	unknown	gnl\|CDD\|378196
NZ_CP009888.1\|WP_038639119.1\|920425_921082_-\|GMP/IMP-nucleotidase	unknown	unknown	gnl\|CDD\|237882
NZ_CP009888.1\|WP_038639132.1\|924409_925615_-\|membrane-dipeptidase	unknown	unknown	gnl\|CDD\|366534
NZ_CP009888.1\|WP_038639110.1\|918707_919208_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009888.1\|WP_038639143.1\|930304_931285_-\|vegetatible-incompatibility-protein-HET-E-1	unknown	unknown	gnl\|CDD\|238121
NZ_CP009888.1\|WP_038642998.1\|930095_930308_-\|SlyX-family-protein	unknown	unknown	gnl\|CDD\|377222
NZ_CP009888.1\|WP_038639129.1\|923749_924361_-\|DnaJ-domain-containing-protein	unknown	unknown	gnl\|CDD\|378839
NZ_CP009888.1\|WP_038639105.1\|915882_916260_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP009888.1\|WP_038639113.1\|919256_919877_+\|dUTP-diphosphatase	unknown	unknown	gnl\|CDD\|370103
NZ_CP009888.1\|WP_052140890.1\|915155_915770_-\|LemA-family-protein	unknown	unknown	gnl\|CDD\|377192
NZ_CP009888.1\|WP_010562181.1\|929855_930056_+\|YheV-family-putative-metal-binding-protein	unknown	unknown	gnl\|CDD\|226060
NZ_CP009888.1\|WP_038639140.1\|927827_929756_-\|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl\|CDD\|236729
NZ_CP009888.1\|WP_038639137.1\|925994_926975_-\|hydrolase	unknown	unknown	gnl\|CDD\|182883
NZ_CP009888.1\|WP_038642995.1\|921142_921697_+\|ADP-compounds-hydrolase-NudE	unknown	unknown	gnl\|CDD\|183303
NZ_CP009888.1\|WP_038639135.1\|925758_925992_-\|YheU-family-protein	unknown	unknown	gnl\|CDD\|179903
NZ_CP009888.1\|WP_038639126.1\|923282_923747_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP009888.1\|WP_038639116.1\|919925_920237_-\|cytochrome-c	unknown	unknown	gnl\|CDD\|365823
NZ_CP009888.1\|WP_052140889.1\|913271_915152_-\|M48-family-metallopeptidase	unknown	unknown	gnl\|CDD\|320699
NZ_CP009888.1\|WP_038639122.1\|921719_922511_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	unknown	unknown	gnl\|CDD\|224139

Protein	Function_ID	Function_description	E-value
NZ_CP009888.1\|WP_038639108.1\|916260_918591_+\|fatty-acid-cis/trans-isomerase	gnl\|CDD\|369142	pfam06934, CTI, Fatty acid cis/trans isomerase (CTI). This family consists of several fatty acid cis/trans isomerase proteins which appear to be found exclusively in bacteria of the orders Vibrionales and Pseudomonadales. Cis/trans isomerase (CTI) catalyzes the cis-trans isomerisation of esterified fatty acids in phospholipids, mainly cis-oleic acid (C(16:1,9)) and cis-vaccenic acid (C(18:1,11)), in response to solvents. The CTI protein has been shown to be involved in solvent resistance in Pseudomonas putida.	0
NZ_CP009888.1\|WP_081991004.1\|927376_927865_-\|TIGR02444-family-protein	gnl\|CDD\|378196	pfam09523, DUF2390, Protein of unknown function (DUF2390). Members of this family are bacterial hypothetical proteins, about 160 amino acids in length, found in various proteobacteria, including members of the genera Pseudomonas and Vibrio. The C-terminal region is poorly conserved and is not included in the model.	5.84464e-25
NZ_CP009888.1\|WP_038639119.1\|920425_921082_-\|GMP/IMP-nucleotidase	gnl\|CDD\|237882	PRK14988, PRK14988, GMP/IMP nucleotidase; Provisional.	3.60045e-94
NZ_CP009888.1\|WP_038639132.1\|924409_925615_-\|membrane-dipeptidase	gnl\|CDD\|366534	pfam01244, Peptidase_M19, Membrane dipeptidase (Peptidase family M19).	4.16838e-106
NZ_CP009888.1\|WP_038639122.1\|921719_922511_+\|3'(2'),5'-bisphosphate-nucleotidase-CysQ	gnl\|CDD\|224139	COG1218, CysQ, 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase [Inorganic ion transport and metabolism].	1.12142e-93
NZ_CP009888.1\|WP_038639143.1\|930304_931285_-\|vegetatible-incompatibility-protein-HET-E-1	gnl\|CDD\|238121	cd00200, WD40, WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.	1.74856e-35
NZ_CP009888.1\|WP_038642998.1\|930095_930308_-\|SlyX-family-protein	gnl\|CDD\|377222	pfam04102, SlyX, SlyX. The SlyX protein has no known function. It is short less than 80 amino acids and is found close to the slyD gene. The SlyX protein has a conserved PPH(Y/W) motif at its C-terminus. The protein may be a coiled-coil structure.	1.94154e-20
NZ_CP009888.1\|WP_038639129.1\|923749_924361_-\|DnaJ-domain-containing-protein	gnl\|CDD\|378839	pfam12339, DNAJ_related, DNA-J related protein. This domain family is found in bacteria, and is approximately 130 amino acids in length. The family is found in association with pfam00226. There is a conserved YYLD sequence motif. Mostof the sequences in this family are annotated as DNA-J related proteins but there is little publication to back this up.	4.19236e-14
NZ_CP009888.1\|WP_038639137.1\|925994_926975_-\|hydrolase	gnl\|CDD\|182883	PRK10985, PRK10985, putative hydrolase; Provisional.	4.36095e-123
NZ_CP009888.1\|WP_052140890.1\|915155_915770_-\|LemA-family-protein	gnl\|CDD\|377192	pfam04011, LemA, LemA family. The members of this family are related to the LemA protein. LemA contains an amino terminal predicted transmembrane helix. It has been predicted that the small amino terminus is extracellular. The exact molecular function of this protein is uncertain.	8.8155e-62
NZ_CP009888.1\|WP_038639140.1\|927827_929756_-\|ATP-binding-cassette-domain-containing-protein	gnl\|CDD\|236729	PRK10636, PRK10636, putative ABC transporter ATP-binding protein; Provisional.	0
NZ_CP009888.1\|WP_010562181.1\|929855_930056_+\|YheV-family-putative-metal-binding-protein	gnl\|CDD\|226060	COG3529, COG3529, Predicted nucleic-acid-binding protein containing a Zn-ribbon domain [General function prediction only].	1.80963e-22
NZ_CP009888.1\|WP_038642995.1\|921142_921697_+\|ADP-compounds-hydrolase-NudE	gnl\|CDD\|183303	PRK11762, nudE, adenosine nucleotide hydrolase NudE; Provisional.	1.73531e-112
NZ_CP009888.1\|WP_038639135.1\|925758_925992_-\|YheU-family-protein	gnl\|CDD\|179903	PRK04966, PRK04966, hypothetical protein; Provisional.	2.29632e-36
NZ_CP009888.1\|WP_038639126.1\|923282_923747_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	4.9751e-12
NZ_CP009888.1\|WP_038639116.1\|919925_920237_-\|cytochrome-c	gnl\|CDD\|365823	pfam00034, Cytochrom_C, Cytochrome c. The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, pfam06181, has now been merged into this family.	2.41659e-07
NZ_CP009888.1\|WP_052140889.1\|913271_915152_-\|M48-family-metallopeptidase	gnl\|CDD\|320699	cd07340, M48B_Htpx_like, Peptidase M48 subfamily B HtpX-like membrane-bound metallopeptidase. This HtpX family of peptidase M48 subfamily B includes uncharacterized HtpX homologs and consists of proteins smaller than Ste24p, with homology restricted to the C-terminal half of Ste24p. HtpX expression is controlled by the Cpx stress response system, which senses abnormal membrane proteins. HtpX participates in the proteolytic quality control of these misfolded proteins by undergoing self-degradation and collaborating with FtsH, a membrane-bound and ATP-dependent protease, to eliminate them. HtpX, a zinc metalloprotease with an active site motif HEXXH, has an FtsH-like topology, and is capable of introducing endoproteolytic cleavages into SecY (also an FtsH substrate). However, HtpX does not have an ATPase activity and will only act against cytoplasmic regions of a target membrane protein. Thus, HtpX and FtsH have overlapping and/or complementary functions, which are especially important at high temperature; in E. coli and Xylella fastidiosa, HtpX is heat-inducible, while in Streptococcus gordonii it is not.	3.33423e-78
NZ_CP009888.1\|WP_038639113.1\|919256_919877_+\|dUTP-diphosphatase	gnl\|CDD\|370103	pfam08761, dUTPase_2, dUTPase. 2-Deoxyuridine 5-triphosphate nucleotidohydrolase (dUTPase) catalyzes the hydrolysis of dUTP to dUMP and pyrophosphate (EC:3.6.1.23). Members of this family have a novel all-alpha fold and are unrelated to the all-beta fold found in dUTPases of the majority of organisms. This family contains both dUTPase homologs of dUTPase including dCTPase of phage T4.	1.13647e-44

>NZ_CP009888.1|WP_038639122.1|921719_922511_+|3'(2'),5'-bisphosphate-nucleotidase-CysQ
MKEFIEPCIQIAQHAGDAILEVYHQDDIELCEKSDNTPVTKADLAANEVLLAGLKALSPDIPIMSEETPIPSLEQRENWERYWLLDPLDGTGEFVLKSGDFAVNIALVENNKPVFGVIFWPTEGVTYWAMADLGAFKRENGEDTKIQVQRQSELKLAVSRRQNIATVSKYIEQEFDTLPLGSCSLKACAIAEGRADAFMRIGPTGEWDTGASQIIVEMAGGKLFDAEFNPITYNQRETTENPDFIITGDQSYPWQEMIKPHKR
>NZ_CP009888.1|WP_038642995.1|921142_921697_+|ADP-compounds-hydrolase-NudE
MPDKKGLTLPEVTRIDEVSHSKLFTVEALDLTFSNGEKRQYERIKGGSRGAVLVVPIDAENNLILVREYCAGTHDYQLGFPKGLIDPGETPVQAGNRELKEEAGFGAKQFAELKLVSLAPSYFNAKMHILLAQSLYPEKLAGDEPEPLEVVKWPLNDWQSLLQQTDFTEARSVAALLLAKQHLS
>NZ_CP009888.1|WP_038639119.1|920425_921082_-|GMP/IMP-nucleotidase
MLNWQEIDTILFDMDGTLLDLHFDNHYWLELIPQKLAEKHGISKEQAFEALSKKYQKVEGQIEWYCLDYWQQELDLPIVELKQEIKHLITVREDVPEFLQALKKAGKTLILLTNAHPDSLSLKIEQTAFDVHLDALISTHEFGVSKESQSLWQQVEQKLGFDKERTLFVDDSLAVLDAAKLYGIKHLLAVANPDSTKETRTLPGYISIEDYRSLLPIR
>NZ_CP009888.1|WP_038639116.1|919925_920237_-|cytochrome-c
MFKIGVMIFLFLIVTACNDDAHDHPSIKSGQALYEYHCAGCHRQSGKGNFLKGIPANIGTGLEEWQLVHKMKQGESNTKMPVFKTMSKGEATKIAEYITSHSH
>NZ_CP009888.1|WP_038639113.1|919256_919877_+|dUTP-diphosphatase
MSANVNKICTMLEMQNAMNTKVHAEWFNQGFEWYRAIWVECAEMLDHYGWKWWKKQTPDTEQVILELVDIFHFGLSLRIDGTTSYQEIAEQLTSELEQPTQAEDFKQTLELLAASAVANKTFDAAAFAGCMAQIGMDIDDLYRGYVGKNTLNFFRQDHGYKDGSYIKVWHGQEDNEHLVEVVKSLDINQANFADLVYQGLKERYPA
>NZ_CP009888.1|WP_038639110.1|918707_919208_+|hypothetical-protein
MKILLAICILVLPFFAKADKVQRKCYSSDGTVKFTTRRCAPGEREEIINSGQSLIQFAQKASNNVTGLNSGFDNSDLTYFLKQNYSQTAWSENIIRSYLEPKEAVVVVDTFRIYKLEEICQATMNWIDQYPHSRFDLSSMRLEFNTGETFAARYVKKSQCDFELRQ
>NZ_CP009888.1|WP_038639108.1|916260_918591_+|fatty-acid-cis/trans-isomerase
MRKFVVLLLILVVSGCTVMAVNNWQQKYGSPEVKQRIVDSQTDQGQFYHDAVKPVLESRCVVCHGCYDAPCQLKLTSPAGIDRGVSKQVVYDGTRLVAATPHRLFVDAQSTSQWRDLGFSPVLNEYPESPTNNLAASVLYNSLLVKKSNPLPQVAKLGSEYDFSLDRSANCASIENYRDTVAKQPNLGMPYGFPAISDDEFNVLQHWLMQGAKMASLAPVDEYTHQQVKKWEAFLNQDSAKHQLMSRYIYEHWFLTNIYFTNANDVTYYKLVRSKTPPGEPIEVIATRRPFDDPKVERVYYRLTRNQASILAKNHIPLALNNKELARLHQLFLETNYEVAQLPSYQVEVASNPFKSFAQIPTEVKYQFLLDHAQTIIMGFIKGPVCRGQVALNVINDHFWVAFVEPKRVGNANMDEFFHQMDDYLAMPAQEQSNALPISSWLKYSRLQAKFLEQKNAKMNTSFADGKGLDMSLVWQGEGHNDNAALTIFRHFDSATVVKGFVGQAPKTMWVLDYSLFERIHYLLVAGFDVYGNVGHQLITRLYMDFLRMEGEQNFLAFLPPEERKKLNAHWYREAPKSLVEYLKSNEQFNQPSGVEFSSDDLQGELYSKIKQHLAAVLNTRYELDNDGVSQALEQLNRLPNTAVEQLAQVSFILVKDGDKHTSYSLLHHNAHLNISSLLNEGAQRAPKEDTASLVNGFIGDYPAVLFYLEKEQVDEFVGKLQAVNSEKSYIALKNQFAIRRTHPEFWRYSDILHKTAKQALTVEYGIFDYNRFENK
>NZ_CP009888.1|WP_038639105.1|915882_916260_+|hypothetical-protein
MEHDNLATESVDIPVFFLAPDAPISEDAEPAFFVSMALTEMVMAEMCQKINDEETHTVFLSDYALLDVNATWQAVVEQVESAQLHLKKGPQLAVMVCTQTGEQFISPWLEFAPEFDLGLDDEDVE
>NZ_CP009888.1|WP_052140890.1|915155_915770_-|LemA-family-protein
MTSVIDNFFTTLGIFLLILAIAAVFIIVIFNTLVKYRNFVVNAFAQIDVQLHRRHDLIPNLVNTCKAYLDHEHATLKQVTEARNAALSCLEQAKQAPSNGSLIKKLAGAENMLTQALSGLQVTIEDYPELKANETVKNLHEELVSTENKIAFARQAYNDEVMQYNTYKQSFPNNIVAAKFGHKDDASMLELAQSEYRQAPSVQL
>NZ_CP009888.1|WP_052140889.1|913271_915152_-|M48-family-metallopeptidase
MKNFFQQQAENRRASALLVCLFCLAVALIVVIAQWFFGLIFDARIASNLNLILYRGWDVFREQNPYQWHLPSAVITFSLIAITGIYKYRQLRVGGGQIAKQLGATRVQPNTFHPLEKQLLNVVEEMAIAARTTVPSVYIQLHQSQVNAFAAGHTNHNAVISVTRGALEKLTRDELQAVVAHEFSHIVNGDIKLNNRLVAATFAISFIGLLGEWILQHAATSRRGRNNSSGFELVAAIILISYGYIGTLLADFIKAAICRRREYLADANACQFNRNPEALANALKVAAGLRLPHRNAHYHQYSHLFFNQTRTPWVSSFSTHPPIIKRIQKLQPSFKAPTDGFKERTNVANYQAMQLTATREYFSENTIPIIKPSVRANTDHLSAKLSQLVHDPYSCFTLIPMLLLSDDFELRSNQLNNLLSSQYVDAFTLDIAEAELAKLCNKQRFELIELAAPSIDCLPRKQKDELANLCWQIILMVDNKQINLPLNHQLLVWLYLEIILMQTTRAKNKLLLKTRNTKQLIQAWRYFVSLVAIIGHNDIQDQQHAFVATCQQFNMKGLTALPITQFDSQSAHQMLAALISLPVKNRNAFLQAIEFTANWDNEINEAEQTMLYSFALLLDLPSAVTD
>NZ_CP009888.1|WP_038639126.1|923282_923747_-|GNAT-family-N-acetyltransferase
MLTFSQIAPELIPLSLLLEADPDEQKIRTYLSNSFCFAATQDINLAGACVFKEQSSQCIELMNIAVVPSHQALGIGSKLLAFAISELKQSDFLRIEVGTGTFGHQLGFYQKLGFRVDSIIKNHFLDNYSKPIFENGIQHKDMLRLVLCLQDRKI
>NZ_CP009888.1|WP_038639129.1|923749_924361_-|DnaJ-domain-containing-protein
MNNLENSLESISFSLQQAIFDLLLQSPNCKLNHIFSHLKEQKLLISLDKDPEQNLFKQNFLVMNALFNLQTDANALGYAVVIDSINIQLICYQEKQLSDTNSKLADYYLDFSNIAISNEEIKSLLDSFWHYYTARNHFELHDVNDAFDVLGLPNNATLKQVKRAWYKIALTSHPDKTASHNSDNYLAANSAYQALLKHFSRTK
>NZ_CP009888.1|WP_038639132.1|924409_925615_-|membrane-dipeptidase
MKYLIKTSLIASALALTFTSNAAEFKASEKAIKLAQENLLIDTHIDVPYRIYHKWDDVSKATEGGDFDYPRGVKGGLNVPFMSIYIPANLEFEGKGKSYQLANQLIDGMEALAQRAPDKFAIATSTSDVEAQFKQGLMSLAMGMENGSPMEGEMANLKHFFDRGVRYITLAHSQSNHISDSSYDIRRKWKGLSPFGKELVKEMNNIGMLIDVSHISDDAFYQVMELSKVPVIASHSSLRKYTPGFERNMDDKMLLALKENGGVIQINFGSSFVTSAAGAWGDKMKAARKQAKEEFGENAPQVKDFRKAYVAKNPYPFASLEQVLNHIDHVVKLIGIDYVGIGSDYDGVGDSLPIGLKDVASYPNLVQGLLDRGYSDSDIIKLLGGNTMRVWRQAEAYAKKH
>NZ_CP009888.1|WP_038639135.1|925758_925992_-|YheU-family-protein
MIVPIDQIDPDTLTNLIKEFVLREGTDYGEEEAALEQKIEQVKMQLKTGTAVLVFSELHETINIMPASDFQSHVDYE
>NZ_CP009888.1|WP_038639137.1|925994_926975_-|hydrolase
MDHNFKPAWWMSNRHAQTILPRFFRPTLAIDYHIEEIATPDDDFLQLIWSKEHIVADEKPLAIVLHGLEGNIDSFYAKGMMKALSLAGFDVVLLHFRNCGYKANLQARAYHSGETTDLHFLVNTLKQRFPSKPLMAVGFSLGGNVLTKYLGEYEHNSQLNAAAVVSAPFALASSCKVIQKSCFKLYQKYLLDRLKKSTARKLEHLKDSINLTAKQLENIYDLWEFDNKVTAPLHGFIDAADYYLKSSGKQYLKRITTPTLVIHAKDDPMLSQEAIPKQEDVSNAVKLMVSKKGGHVGFISGKNPFRPIFWLEQQVPHFFQQQLLSK
>NZ_CP009888.1|WP_081991004.1|927376_927865_-|TIGR02444-family-protein
MRKLNLQHNLQTDRLWQFSLDYYSKSAHSSALLTLQDSYGANVNLCLLLIYLQMHNLPIDVSQIDALHSEVSFFNKTYTSPLRQTRSLFKLSLQELPNYPALRAHLLNAELELEKHEQQILINAYNKTKQQNPDAKLALHYYLSNTLHVSKTDLDQTLIQLS
>NZ_CP009888.1|WP_038639140.1|927827_929756_-|ATP-binding-cassette-domain-containing-protein
MIQISNLELLRGGKPLLKNTNATLFPGHKVGLVGNNGCGKSSLFALLRNELTPDMGECLIPKEWRIASVKQETPGLAISALEYVLQGYQDYYALREQLHLAEQNNDGAKQAEIHLALEEMQAYHIEAKASELLHGLGFMQGQISLPVKDFSGGWRMRLNLAQALLQEADLLLLDEPTNHLDLDAVYWLEKFLKSYPGTLILISHDREFLDAIVGEIWHVYQQQIHSYKGNYSQFERIKAEKLAQQQSNFEKQQEQIAHLENFIRRFKAKASKAKQAQSRVKALERMEKLAPAHIDSPFNFSFKEPPSLPNPLVTLEKVKAGYGDVTIIQDIKLNLVPGSRIALLGKNGAGKSTLIKLLAGELAPQAGEFVHHQGLRIGYFAQHQLESLDPSASPLLHLQRLDKKASEQELRDFLGCFAFHGDKALDPVAPFSGGEKARLVLALLVYQKPNILLLDEPTNHLDLEMRHALVMALQGFEGAMVTVSHDRHLLKNTSDQFYLVNDGQVTQLGYEIEDYYAWLANKDSNKTGESKTTTLENKPNKVQNRKEQKRLEAEFRAKMQPLKREIAKLEKQLETVSEQLQVAENALADASIYQEENKTELTKQLAEQAKLAPQLNDIEESLLEKLEQLETEEAEFAAQFAD
>NZ_CP009888.1|WP_010562181.1|929855_930056_+|YheV-family-putative-metal-binding-protein
MKQKKRFIAGATCPECKKQDTMMLYKEMDVEKVECVECGHTMTQAEGQVQASTRQFEQVIGVFKPE
>NZ_CP009888.1|WP_038642998.1|930095_930308_-|SlyX-family-protein
MSNLEARITELEMKVAYQDETIDILNDEIKQHQVTMAKMSRQIELVGEKLKEMKPSSVVSQELETPPPHY
>NZ_CP009888.1|WP_038639143.1|930304_931285_-|vegetatible-incompatibility-protein-HET-E-1
MKPYRLTLIIFMLFTLTACDKPNSLPNNAQEHAVQGSYAAALNNKGTLAIVSSINHGVSVWNLNDNALLYQWSHQQDTDNLVLAIDISDDDKFAVTADRTNFAVWSLESGENIGFWKIQESSIRDIAISNNGRYVLYGRGDGKVIHVDLNSGRRIEFLGHTEKVNAVDLSPNGFYALTGANDYTAYLWDTRSAQVIHRFTHPSRVTQVALDREGRKAFTADSQKQASIWNLQNGSQMANLQFNARQKVFSAVRFNSDTSLLATGSPARTIALWDTSNGKQLQTWRVAPRQGSRPKSAVVYDIAFSDNGNLISESSNGLSETWQMNK

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP009888_1	1.2\|923068\|47\|NZ_CP009888\|PILER-CR	923068-923114	47	NZ_CP009888.1	922860-922906	1	0.979

1. spacer 1.2|923068|47|NZ_CP009888|PILER-CR matches to position: 922860-922906, mismatch: 1, identity: 0.979

ataattcaaatttattaatcaagtatatttcgccctacggtcgtcgt	CRISPR spacer
ataattcaaacttattaatcaagtatatttcgccctacggtcgtcgt	Protospacer
**********.************************************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1821327 : 1846482

Vibrio_phage(28.57%)

protease,capsid,portal,integrase,terminase

attL 1822544:1822558|attR 1837058:1837072

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038640794.1\|1821327_1823286_+\|protease	ATP-dependent zinc metalloprotease FtsH	A0A0P0BXI2	Ostreococcus_lucimarinus_virus	1.0e-115	47.5
1822544:1822558	attL	NA	NA	NA	NA
WP_038640796.1\|1823335_1824184_+	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	1.1e-21	29.1
WP_038640798.1\|1824173_1825532_+	phosphoglucosamine mutase	NA	NA	NA	NA
WP_038640800.1\|1825594_1826344_+	triose-phosphate isomerase	NA	NA	NA	NA
WP_038640801.1\|1826346_1826703_+	preprotein translocase subunit SecG	NA	NA	NA	NA
WP_052140945.1\|1826841_1828092_-\|integrase	site-specific integrase	A0A2H4JGM5	uncultured_Caudovirales_phage	1.3e-76	42.1
WP_038640804.1\|1828072_1828276_-	hypothetical protein	NA	NA	NA	NA
WP_081991035.1\|1828272_1828854_-	adenine methylase	A0A2I7RS54	Vibrio_phage	7.3e-62	62.5
WP_038640809.1\|1828840_1829749_-	recombination-associated protein RdgC	A0A067ZG66	Vibrio_phage	6.1e-63	44.4
WP_038640811.1\|1829836_1830106_-	hypothetical protein	NA	NA	NA	NA
WP_052140946.1\|1830116_1830716_-	single-stranded DNA-binding protein	R9TR60	Vibrio_phage	3.5e-51	54.5
WP_038640814.1\|1831277_1831739_+	hypothetical protein	NA	NA	NA	NA
WP_038640815.1\|1831740_1832043_+	hypothetical protein	NA	NA	NA	NA
WP_038640817.1\|1832139_1832601_-	hypothetical protein	NA	NA	NA	NA
WP_038640819.1\|1832781_1832994_+	hypothetical protein	NA	NA	NA	NA
WP_052140948.1\|1834007_1834667_+	hypothetical protein	A0A2H4J1B6	uncultured_Caudovirales_phage	5.5e-13	47.1
WP_038640821.1\|1834663_1834912_+	hypothetical protein	NA	NA	NA	NA
WP_038640823.1\|1835061_1836300_+\|integrase	tyrosine-type recombinase/integrase	A0A2D1GND4	Pseudomonas_phage	1.2e-50	33.7
WP_038640825.1\|1836353_1836578_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_038640827.1\|1836555_1836927_+	hypothetical protein	NA	NA	NA	NA
WP_038640829.1\|1836962_1837931_-	hypothetical protein	NA	NA	NA	NA
1837058:1837072	attR	NA	NA	NA	NA
WP_038640830.1\|1838349_1838781_+	M15 family peptidase	A0A2I7QMX7	Vibrio_phage	2.6e-24	46.3
WP_038640832.1\|1838777_1839359_+	alpha/beta hydrolase	NA	NA	NA	NA
WP_038640834.1\|1839351_1839642_+	hypothetical protein	NA	NA	NA	NA
WP_038640836.1\|1839803_1840118_+	hypothetical protein	NA	NA	NA	NA
WP_038640837.1\|1840117_1840549_+	hypothetical protein	NA	NA	NA	NA
WP_038640839.1\|1840670_1841096_+\|terminase	phage terminase small subunit P27 family	A0A1J0GV10	Halomonas_phage	5.1e-20	46.0
WP_038640841.1\|1841099_1842812_+\|terminase	terminase large subunit	A0A1J0GUY5	Halomonas_phage	2.3e-220	64.0
WP_038640843.1\|1842963_1844211_+\|portal	phage portal protein	Q6UAX8	Klebsiella_phage	2.4e-126	57.6
WP_038640845.1\|1844214_1845129_+	S49 family peptidase	Q7Y411	Yersinia_phage	2.4e-59	42.9
WP_038640847.1\|1845201_1846482_+\|capsid	phage major capsid protein	Q6UAX6	Klebsiella_phage	4.2e-118	54.7

DBSCAN-SWA_2

2942119 : 2951627

Staphylococcus_phage(14.29%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_010561687.1\|2942119_2942584_-	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	3.3e-33	51.3
WP_038642463.1\|2942681_2943794_-	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	M4QPK3	Synechococcus_phage	3.2e-37	37.5
WP_038642465.1\|2943818_2944478_-	riboflavin synthase	A0A2I2L4R9	Orpheovirus	9.0e-24	34.9
WP_038642467.1\|2944479_2945601_-	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A1V0SE20	Indivirus	3.2e-53	36.1
WP_038642469.1\|2945605_2946055_-	transcriptional regulator NrdR	NA	NA	NA	NA
WP_010561692.1\|2946124_2947381_-	serine hydroxymethyltransferase	A0A219Y950	Aeromonas_phage	6.2e-98	53.9
WP_052141014.1\|2947580_2949809_-	patatin	A0A1V0SFX9	Hokovirus	4.3e-09	27.2
WP_038642471.1\|2949953_2951627_+	energy-dependent translational throttle protein EttA	A0A1V0SKJ1	Klosneuvirus	2.7e-40	25.7

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP009889

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CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP009888

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection