CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP003409	Thermotoga sp. Cell2 chromosome, complete genome	8 crisprs	cas14k,DEDDh,cas3,cas3HD,cas6,csx1,cas10,csm2gr11,csm3gr7,csm4gr5,csm5gr7,csx22,cas7,cas5,cas4,cas1,cas2,csa3,WYL,cas14j	0	2	6	0

1. NZ_CP003409

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP003409_1

• CRISPR_ID: NZ_CP003409_1
• CRISPR_location: 520586-521233
• CRISPR_type: Orphan
• Repeat_type: III-A
• Spacer_info: 9 spacers

Consensus repeat of NZ_CP003409_1

Consensus_repeat	Method
GTTTCAATAGTTCCTTAGAGGTATGGAAA	CRT
GTTTCAATAGTTCCTTAGAGGTATGGAAAC	PILER-CR
GTTTCAATAGTTCCTTAGAGGTATGGAAAC	CRISPRCasFinder

spacers of NZ_CP003409_1

>1.1|520615|50|NZ_CP003409|CRT
AAACCAAGGGTTGGAAACCAAGAAAGAATTAAAAACCTGGGGGGAGGGGG
>1.2|520694|45|NZ_CP003409|CRT
AAACTAGAATCCAACGTCCTTGGGGAGGGAGGGGCTACATAACCC
>1.3|520768|36|NZ_CP003409|CRT
ACTCCTATCACAGCTCTTCGGCACTAAGACTCCCGT
>1.4|520833|37|NZ_CP003409|CRT
CTACCTATATATGTTTCAGCACAATAAAGGTACGGCA
>1.5|520899|37|NZ_CP003409|CRT
CTAAACTCTCTTTCCTCCTCTGATATATCCTCAGGTG
>1.6|520965|37|NZ_CP003409|CRT
CACGCACCGTTTCTCTTCAGAATCAGTGAAAGTGAGA
>1.7|521031|40|NZ_CP003409|CRT
CCCGTAGTCAAAATCGTAGAAACAGACAAGGTACCAACCG
>1.8|521100|38|NZ_CP003409|CRT
CGGAGTACCTTCCGCTTCTTCCAAGCAACGTGGTAGAG
>1.9|521167|37|NZ_CP003409|CRT
CGAAGACAACCAAAGTCTAAAACTCGGTTTTCCGTGG
>1.10|520770|34|NZ_CP003409|PILER-CR
TCCTATCACAGCTCTTCGGCACTAAGACTCCCGT
>1.11|520835|36|NZ_CP003409|PILER-CR
TACCTATATATGTTTCAGCACAATAAAGGTACGGCA
>1.12|520902|36|NZ_CP003409|PILER-CR
TAAACTCTCTTTCCTCCTCTGATATATCCTCAGGTG
>1.13|520969|36|NZ_CP003409|PILER-CR
ACGCACCGTTTCTCTTCAGAATCAGTGAAAGTGAGA
>1.14|521036|39|NZ_CP003409|PILER-CR
CCGTAGTCAAAATCGTAGAAACAGACAAGGTACCAACCG
>1.15|521106|37|NZ_CP003409|PILER-CR
GGAGTACCTTCCGCTTCTTCCAAGCAACGTGGTAGAG
>1.16|520769|35|NZ_CP003409|CRISPRCasFinder
CTCCTATCACAGCTCTTCGGCACTAAGACTCCCGT
>1.17|520834|36|NZ_CP003409|CRISPRCasFinder
TACCTATATATGTTTCAGCACAATAAAGGTACGGCA
>1.18|520900|36|NZ_CP003409|CRISPRCasFinder
TAAACTCTCTTTCCTCCTCTGATATATCCTCAGGTG
>1.19|520966|36|NZ_CP003409|CRISPRCasFinder
ACGCACCGTTTCTCTTCAGAATCAGTGAAAGTGAGA
>1.20|521032|39|NZ_CP003409|CRISPRCasFinder
CCGTAGTCAAAATCGTAGAAACAGACAAGGTACCAACCG
>1.21|521101|37|NZ_CP003409|CRISPRCasFinder
GGAGTACCTTCCGCTTCTTCCAAGCAACGTGGTAGAG
>1.22|521168|36|NZ_CP003409|CRISPRCasFinder
GAAGACAACCAAAGTCTAAAACTCGGTTTTCCGTGG

CRISPR arrays and Neighbor proteins around NZ_CP003409_1

CRISPR arrays

The CRISPR arrays of NZ_CP003409_1

>merge|NZ_CP003409|1|520586-521233|CRT,PILER-CR,CRISPRCasFinder
GTTTCATAAGTTCCCTAAGAGGGTATTGGAAACCAAGGGTTGGAAACCAAGAAAGAATTAAAAACCTGGGGGGAGGGGGTTTCAAATAGTTCCTTAAGAGGGTATGAAAAACTAGAATCCAACGTCCTTGGGGAGGGAGGGGCTACATAACCCGTTTCAATAGTTCCTTAGAGGGTATGGAAACTCCTATCACAGCTCTTCGGCACTAAGACTCCCGTGTTTCAATAGTTCCTTAGAGGTATGGAAACTACCTATATATGTTTCAGCACAATAAAGGTACGGCAGTTTCAATAGTTCCTTAGAGGTATGGAAACTAAACTCTCTTTCCTCCTCTGATATATCCTCAGGTGGTTTCAATAGTTCCTTAGAGGTATGGAAACACGCACCGTTTCTCTTCAGAATCAGTGAAAGTGAGAGTTTCAATAGTTCCTTAGAGGTATGGAAACCCGTAGTCAAAATCGTAGAAACAGACAAGGTACCAACCGGTTTCAATAGTTCCTTAGAGGTATGGAAACGGAGTACCTTCCGCTTCTTCCAAGCAACGTGGTAGAGGTTTCAATACTTCCTTAGAGGTATGGAAACGAAGACAACCAAAGTCTAAAACTCGGTTTTCCGTGGGTTTCAATACTTCCTTAGAGGTATGGAACC

>NZ_CP003409|1|1|520586-521232|CRT
GTTTCATAAGTTCCCTAAGAGGGTATTGG	AAACCAAGGGTTGGAAACCAAGAAAGAATTAAAAACCTGGGGGGAGGGGG
TTTCAAATAGTTCCTTAAGAGGGTATGAA	AAACTAGAATCCAACGTCCTTGGGGAGGGAGGGGCTACATAACCC
GTTTCAATAGTTCCTTAGAGGGTATGGAA	ACTCCTATCACAGCTCTTCGGCACTAAGACTCCCGT
GTTTCAATAGTTCCTTAGAGGTATGGAAA	CTACCTATATATGTTTCAGCACAATAAAGGTACGGCA
GTTTCAATAGTTCCTTAGAGGTATGGAAA	CTAAACTCTCTTTCCTCCTCTGATATATCCTCAGGTG
GTTTCAATAGTTCCTTAGAGGTATGGAAA	CACGCACCGTTTCTCTTCAGAATCAGTGAAAGTGAGA
GTTTCAATAGTTCCTTAGAGGTATGGAAA	CCCGTAGTCAAAATCGTAGAAACAGACAAGGTACCAACCG
GTTTCAATAGTTCCTTAGAGGTATGGAAA	CGGAGTACCTTCCGCTTCTTCCAAGCAACGTGGTAGAG
GTTTCAATACTTCCTTAGAGGTATGGAAA	CGAAGACAACCAAAGTCTAAAACTCGGTTTTCCGTGG
GTTTCAATACTTCCTTAGAGGTATGGAAC

>NZ_CP003409|1|1|520739-521167|PILER-CR
GTTTCAATAGTTCCTTAGAGGGTATGGAAAC	TCCTATCACAGCTCTTCGGCACTAAGACTCCCGT
GTTTCAATAGTTCCTTAGAGGTATGGAAACT	ACCTATATATGTTTCAGCACAATAAAGGTACGGCAG
TTTCAATAGTTCCTTAGAGGTATGGAAACTA	AACTCTCTTTCCTCCTCTGATATATCCTCAGGTGGT
TTCAATAGTTCCTTAGAGGTATGGAAACACG	CACCGTTTCTCTTCAGAATCAGTGAAAGTGAGAGTT
TCAATAGTTCCTTAGAGGTATGGAAACCCGT	AGTCAAAATCGTAGAAACAGACAAGGTACCAACCGGTTT
CAATAGTTCCTTAGAGGTATGGAAACGGAGT	ACCTTCCGCTTCTTCCAAGCAACGTGGTAGAGGTTTC
AATACTTCCTTAGAGGTATGGAAAC

>NZ_CP003409|1|1|520739-521233|CRISPRCasFinder
GTTTCAATAGTTCCTTAGAGGGTATGGAAA	CTCCTATCACAGCTCTTCGGCACTAAGACTCCCGT
GTTTCAATAGTTCCTTAGAGGTATGGAAAC	TACCTATATATGTTTCAGCACAATAAAGGTACGGCA
GTTTCAATAGTTCCTTAGAGGTATGGAAAC	TAAACTCTCTTTCCTCCTCTGATATATCCTCAGGTG
GTTTCAATAGTTCCTTAGAGGTATGGAAAC	ACGCACCGTTTCTCTTCAGAATCAGTGAAAGTGAGA
GTTTCAATAGTTCCTTAGAGGTATGGAAAC	CCGTAGTCAAAATCGTAGAAACAGACAAGGTACCAACCG
GTTTCAATAGTTCCTTAGAGGTATGGAAAC	GGAGTACCTTCCGCTTCTTCCAAGCAACGTGGTAGAG
GTTTCAATACTTCCTTAGAGGTATGGAAAC	GAAGACAACCAAAGTCTAAAACTCGGTTTTCCGTGG
GTTTCAATACTTCCTTAGAGGTATGGAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP003409.1|WP_038033549.1|515555_516833_+|NAD(P)/FAD-dependent-oxidoreductase	unknown	unknown	gnl|CDD|224171
NZ_CP003409.1|WP_038033536.1|527313_529269_+|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl|CDD|181342
NZ_CP003409.1|WP_004083197.1|523772_524108_+|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl|CDD|223672
NZ_CP003409.1|WP_038033547.1|517584_518700_-|ROK-family-transcriptional-regulator	unknown	unknown	gnl|CDD|224851
NZ_CP003409.1|WP_012895854.1|512457_513591_+|glutamine-amidotransferase-family-protein	unknown	unknown	gnl|CDD|238888
NZ_CP003409.1|WP_038033540.1|524153_525503_+|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl|CDD|273568
NZ_CP003409.1|WP_038033537.1|526170_526671_+|nitroreductase-family-protein	unknown	unknown	gnl|CDD|380325
NZ_CP003409.1|WP_012310607.1|518704_519925_-|glycosyltransferase	unknown	unknown	gnl|CDD|340823
NZ_CP003409.1|WP_012895855.1|511379_512057_-|response-regulator-transcription-factor	unknown	unknown	gnl|CDD|223816
NZ_CP003409.1|WP_038033558.1|509643_510198_+|thymidine-kinase	unknown	unknown	gnl|CDD|224352
NZ_CP003409.1|WP_008191950.1|516820_517558_+|hypothetical-protein	unknown	unknown	gnl|CDD|238481
NZ_CP003409.1|WP_004083204.1|526796_527348_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl|CDD|274317
NZ_CP003409.1|WP_004083227.1|515103_515559_+|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|319885
NZ_CP003409.1|WP_038033541.1|521342_522308_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223318
NZ_CP003409.1|WP_004083210.1|530312_531323_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|223912
NZ_CP003409.1|WP_038033555.1|510181_511399_-|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl|CDD|223715
NZ_CP003409.1|WP_038033534.1|529350_530316_+|redoxin-domain-containing-protein	unknown	unknown	gnl|CDD|380315
NZ_CP003409.1|WP_038033551.1|513583_515107_+|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl|CDD|223147
NZ_CP003409.1|WP_004083200.1|525479_526142_-|endonuclease-III-domain-containing-protein	unknown	unknown	gnl|CDD|225140
NZ_CP003409.1|WP_011943166.1|532396_533302_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP003409.1|WP_038033549.1|515555_516833_+|NAD(P)/FAD-dependent-oxidoreductase	gnl|CDD|224171	COG1251, NirB, NAD(P)H-nitrite reductase [Energy production and conversion].	1.08712e-84
NZ_CP003409.1|WP_038033536.1|527313_529269_+|anaerobic-ribonucleoside-triphosphate-reductase	gnl|CDD|181342	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
NZ_CP003409.1|WP_004083197.1|523772_524108_+|carboxymuconolactone-decarboxylase-family-protein	gnl|CDD|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	6.03237e-20
NZ_CP003409.1|WP_038033547.1|517584_518700_-|ROK-family-transcriptional-regulator	gnl|CDD|224851	COG1940, NagC, Transcriptional regulator/sugar kinase [Transcription / Carbohydrate transport and metabolism].	1.52285e-41
NZ_CP003409.1|WP_012895854.1|512457_513591_+|glutamine-amidotransferase-family-protein	gnl|CDD|238888	cd01907, GlxB, Glutamine amidotransferases class-II (Gn-AT)_GlxB-type. GlxB is a glutamine amidotransferase-like protein of unknown function found in bacteria and archaea. GlxB has a structural fold similar to that of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The GlxB fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.	1.42689e-110
NZ_CP003409.1|WP_038033540.1|524153_525503_+|dihydrolipoyl-dehydrogenase	gnl|CDD|273568	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase. This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.	0
NZ_CP003409.1|WP_038033537.1|526170_526671_+|nitroreductase-family-protein	gnl|CDD|380325	cd02150, nitroreductase, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers.	1.36347e-95
NZ_CP003409.1|WP_012310607.1|518704_519925_-|glycosyltransferase	gnl|CDD|340823	cd03792, GT4_trehalose_phosphorylase, trehalose phosphorylase and similar proteins. Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT4 family of glycosyltransferases.	0
NZ_CP003409.1|WP_012895855.1|511379_512057_-|response-regulator-transcription-factor	gnl|CDD|223816	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].	3.37318e-86
NZ_CP003409.1|WP_038033558.1|509643_510198_+|thymidine-kinase	gnl|CDD|224352	COG1435, Tdk, Thymidine kinase [Nucleotide transport and metabolism].	4.65829e-80
NZ_CP003409.1|WP_008191950.1|516820_517558_+|hypothetical-protein	gnl|CDD|238481	cd00981, arch_gltB, Archaeal-type gltB domain. This domain shares sequence similarity with a region of unknown function found in the large subunit of glutamate synthase, which is encoded by gltB and found in most bacteria and eukaryotes. It is predicted to be homologous to the C-terminal domain of glutamate synthase based upon sequence similarity coupled with genome organization data, showing that this domain is found in a gene cluster with other domains of Glts, which are annotated. This domain is found primarily in archaea, but is also present in a few bacteria, likely as a result of lateral gene transfer.	4.04526e-126
NZ_CP003409.1|WP_004083204.1|526796_527348_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl|CDD|274317	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of radical SAM enzymes related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	2.14837e-67
NZ_CP003409.1|WP_004083227.1|515103_515559_+|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|319885	cd10563, CooF_like, CooF, iron-sulfur subunit of carbon monoxide dehydrogenase. This family includes CooF, the iron-sulfur subunit of carbon monoxide dehydrogenase (CODH), found in anaerobic bacteria and archaea. Carbon monoxide dehydrogenase is a key enzyme for carbon monoxide (CO) metabolism, where CooF is the proposed mediator of electron transfer between CODH and the CO-induced hydrogenase, catalyzing the reaction that uses CO as a single carbon and energy source, and producing only H2 and CO2. The ion-sulfur subunit contains four Fe4/S4 and/or Fe3/S4 clusters which transfer the electrons in the protein complex during reaction.	1.75166e-65
NZ_CP003409.1|WP_038033541.1|521342_522308_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl|CDD|223318	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	1.8508e-156
NZ_CP003409.1|WP_004083210.1|530312_531323_-|ABC-transporter-permease	gnl|CDD|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.74909e-16
NZ_CP003409.1|WP_038033555.1|510181_511399_-|HAMP-domain-containing-histidine-kinase	gnl|CDD|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.94993e-52
NZ_CP003409.1|WP_038033534.1|529350_530316_+|redoxin-domain-containing-protein	gnl|CDD|380315	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to Burkholderia pseudomallei TdsD, may be involved in the processing of organosulfur compounds. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	5.95669e-81
NZ_CP003409.1|WP_038033551.1|513583_515107_+|4Fe-4S-dicluster-domain-containing-protein	gnl|CDD|223147	COG0069, GltB, Glutamate synthase domain 2 [Amino acid transport and metabolism].	0
NZ_CP003409.1|WP_004083200.1|525479_526142_-|endonuclease-III-domain-containing-protein	gnl|CDD|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	5.31762e-96
NZ_CP003409.1|WP_011943166.1|532396_533302_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.87897e-98

Protein sequences

>NZ_CP003409.1|WP_012310607.1|518704_519925_-|glycosyltransferase
MDVVLRERNIEEYRTIIGNEVDEIKKLAEPLKGKKVLHVNATAYGGGVAEILHNLVPLMRSVGLDARWRVIEAPDEFFNVTKKFHNTLQGADIEISEEEWNLYEEVCRKNAELIQDEELFVIHDPQPAALRKFVDLNDRKWIWRCHIDLSTPNMKVWQRFSQYLEGYDRLVFHLEEYFPQGWKERSIAFPPSIDPLSEKNRDLDEDTIRKTLERLEIDPERPLITVVSRFDPWKDLFSAIDVYRLVKKEIPEVQLAVVSAMATDDPEGWFFFEKVLRYAGTDEDIKFCTNLKGVGNKEVNAIQRATTVALHTATREGFGLVISEALYKRVPVVARPVGGVKIQVKHGENGYLAWEREDLAGYVVKLIKDEELRRKMGEKGRQTVVENFIITVHLKNYLKLFLDLLR
>NZ_CP003409.1|WP_038033547.1|517584_518700_-|ROK-family-transcriptional-regulator
MPSPLLRRENKIKILRYILRNGKTTRNQLASNLNLAHSTLSYIIDELLDEGFLVFEEIRKRRGRPYQILKVNPEKFTAIGVKVGREEVRGVLFDASMNPLKEHRVQILSGMRNNDGYTRALRETIEQLHSENLLGVGICSSGIVKEGKVIVSHVMNVKDWDPRKVLKDLERILVMNDSDALCREISQRVNADFLLVSYGIGIGASLWKDKRIHHLEMGHMLASSEGKCYCGQTGCLEYHSSEYAVLKSCLGKEIDFEDFITSEEEKYRQTIEELREKARKDFDSVKVHYEKAFKTFSVILGNVIMGSGVSRVFFAGEGVVNEEMIKILEEMVRARFNRDFVGEVQFQVADANWMFGAARAVVDKYLPYIVK
>NZ_CP003409.1|WP_008191950.1|516820_517558_+|hypothetical-protein
MVRIDAKGLHYKKLNDLIWEAIENGEEEIVLDNVCGQRYIGAGIRKKVKIEINGVPGNDLGVFMDGPEIIVNGNAQDGVGNTMNAGKIVVHGHAGDIIGYAMRGGHIYIKRNAGYRVGIHMKAYKENYPVVVIGGFARDFLGEYMAGGLLIVLGLEKDEDGNIAGNYVGTGMHGGEIFLRGTVEEHKLGKEVKIFQPTEEDINRIKPYVEEFCRLFDYDSEEILNGEFIILKPYTHRPYGRLYAY
>NZ_CP003409.1|WP_038033549.1|515555_516833_+|NAD(P)/FAD-dependent-oxidoreductase
MRYVIVGSGPAGLNAIEAIREVDKEGEILLITAEKYVGYSRPLITYLLGRKVTEEKMYYRTEDYLREMRVDIKPATRVEKVIPEEKTVVTDSGEEIRYDKLLIATGGKPFVPNIEGLTGKKGVFTFTTWEDEEKVEKYIEENDVKEAVVLGGGLIGLKTTEALMELGVKVTIVELADRILSVTFDRKASEIITEALKKEGCSVITNDTVVKVNGDDTVSSVVLKSGKEIPTKLLVIAIGVRPNVEFLKDSGIEINRGIVVNEMMETNVEGVYAAGDCTEFYDLIDGQRKTIAIWPVAVAQGRVAGYNMAGRNVRYPGGIPMNSVELAGIPTISVGHSNVEDDGYEILTFEEGNTYKKMVLKDNRLIGAILVNDIDRAGIYTGLILQKLDVSSFKDRLLDENFGLVYLPKEFRKKMLEGEIKIWLE
>NZ_CP003409.1|WP_004083227.1|515103_515559_+|4Fe-4S-dicluster-domain-containing-protein
MIAVRRILIREEYCMGCKLCEINCVAAQVGTGNLIKVYRYVPELPEPNVIVEEHDYVTFALQCRNCDDPSCLKACMTGAMHRDPKTGAIRVNQEKCVGCWMCVMACPFGVIRRNTKEKKVASKCDLCADRGTPGCVEGCPNEALVLVEVRE
>NZ_CP003409.1|WP_038033551.1|513583_515107_+|4Fe-4S-dicluster-domain-containing-protein
MAKRKVPPEFVVERDDYKCIRCLACVRVCSYGANFYDENANRVYTENTKCVGCHFCEAICPTEAITVRKNGFDIRPLAHWTPEHLIGIMKQAETGGVLLTSMGNDRPYFSYFDRIVLNASQVTNPSIDPLREPMEIRTYIGRKEEKLEIEEDEDGTVKLKTEIAPQLKLEVPVMFTAMSYGSISLNAILSLARAARTVGTFFNTGEGGLPKELREFKDNMIVQVASGRFGVSADYLNAGSAVEIKIGQGAKPGIGGHLPGEKVTEPISETRMIPVGTDALSPAPHHDIYSIEDLRQLIYAIKEATRYEKPVGVKIAAVHNVAPIAAGAVRAGADYIVIDGIRGGTGAAPKITRDHVGIPIEFAVAVVDQRLREEGIRHMASIVVAGGIRNSADVIKAIALGADAVYIGTAALISLGCHLCQTCYLGKCNWGIATQDPKLTKRLNPEIGARRAANLLRAWAHEIKEILGGMGINAIESLRGNREVLRGVGLHEYELKLLGIKPAGEAW
>NZ_CP003409.1|WP_012895854.1|512457_513591_+|glutamine-amidotransferase-family-protein
MSYDLPRLIPDKDFKVPSACGVSGIMNTSGKRFSGNMIVESMALMRERGNGLGAGYAAYGIYPELKDLYCFHMLYDSDLDKKNAEEYIKDHYEIIESEPIPTRKNPHIKEVHILWRYFLKPKFIPEDMSEEDFVVSTVMFINEKINGAFVMSSGKNMGVFKGVGFPEDIADFYRIDEYKGYIWTAHNRFPTNTVGWWGGAHPFGILDWTVVHNGEISSYGINRRFLEAYGYKCTLMTDTEVVAYLVDLFMRRFGYSPQLTAKILAAPLWKDIDLMPEEERKLYTALRMNYGGALLNGPFAIIVANNNMMMGLNDRIKLRPLVAATKDDFLYIASEESAIRVVCPEPDEVWAPKAGDPVVGVLKSARKTQVVLEGENG
>NZ_CP003409.1|WP_012895855.1|511379_512057_-|response-regulator-transcription-factor
MNVRVLVVEDERDLADLIAEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRENGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKSTKLVCGDLILDTATKKAYRGGKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLWSFDDEVFSDVLRSHIKNLRKKVDKGFKRKIIHTVRGIGYVARDE
>NZ_CP003409.1|WP_038033555.1|510181_511399_-|HAMP-domain-containing-histidine-kinase
MLPVTNEKKAFRKTQLIWTAVFTLSIVLIVAITVGAVFIVEKRRITTQFDGELRRTADLIERRLKAPGMMGMLRTFRGVDPLFVPRGEAFQFLFPSGEVFLEVGEQIGTPETPVEEGFSTEGNYRIFTKKIDLGDTTIFLRVGKDISDLIERSRRLLSMYLLVILFFAGGAAVFGYFVSSLVLLPVRNAYNSLKRFSMDASHELKTPLSVLRTSLDVLKYREDLPDDVKNKLGIMEKNVEKMSKQINQLLLLVKSESSFNGVVKERINLKEFLQQIVNEFKPKAESKGLVLEIDCPEDLFLETEKDTLRVILENLIDNAVKFTEKGKVIVGARKEGRLTIYVQDTGPGIPKKEQKRIFERFYRISRNTEGSGLGLSIVKELASRLKAKVILESEEGKGSTFKLVF
>NZ_CP003409.1|WP_038033558.1|509643_510198_+|thymidine-kinase
MSGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPKIDSRYHSTMIVSHSGNGVEAHVIERPEEIRKYIEEDTRGVFIDEVQFFSPGLFEVVKDLLDRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEEIDVGGQEKYIAVCRDCYNTLKKRV
>NZ_CP003409.1|WP_038033541.1|521342_522308_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MRFFVLGAGSWGTVFAQILHENGEEVVLWARRKEIVGLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAIPVQYIREHLLRLPVKPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTLAGENSKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQSMRDLMRRSLKDEFWAS
>NZ_CP003409.1|WP_004083197.1|523772_524108_+|carboxymuconolactone-decarboxylase-family-protein
MAAKEKLEQIQKQLQEIIGKAPEIGKFAEYVHAAESPKALDTKTKELISLGIAVAVRCEPCIVWHAGAAVRAGATEEEILDTIKVAVCMGGGPALMYGLKAYEIALEFLGK
>NZ_CP003409.1|WP_038033540.1|524153_525503_+|dihydrolipoyl-dehydrogenase
MYDAVIIGGGPGGYVCAIKLAQLGKKVALVEKDALGGTCTNRGCIPTKAMLTVSHLMDEMKEKASKYGLKVSGVEYDVAAIMKHVQKSVMMSRKGIEYLLKKNGVEVFKGTAVVENKNTVVVQETGEKLEAKNLVLAHGSVPSVFSPFDIDGVWTSDDVFNLKEFPKSLVIIGGGVIGVEFATFFGSFGVDVTIVEIAEHILPYEDSDVAEEVKKALKRKGVKILEKTKISSLSKVDDGFEVALENGETLKAEKVLLAAGRKPNIPEDVKALGVKIEKGVVTDSRMRTNVENVYAIGDIRSGIMLAHVAMYEGIVAAKNIAGEEEEMDYSAVPSIIFSSPEVASVGVREKDVNPEEVVISKFPVSANGRARTMLENIGFAKVIADKKDGTVLGMSIVSPSATDMIMEGVIAVKFRMKAEVLEKAIHPHPTLTETILGALEGVSGKPIHL
>NZ_CP003409.1|WP_004083200.1|525479_526142_-|endonuclease-III-domain-containing-protein
MRLTELYRKLLEIHGSVGKWWPGTPEEIVITAVLTQNTNWKNVERAMENIKNEVKGNNLLKELDSLPEEKVAELIRPAGFFNIKTKRLKELLKFLKEYNYNLSRLRDLPTHILRERLLKIKGIGKETADAILLYALEKPVFVVDSYTRRLLKRIFNIELNDYDEVQKLFMTHYPEDVRLYQEFHGLIVEHAKKFCSKTPKCGVCPLKKECCHVSQMNGFS
>NZ_CP003409.1|WP_038033537.1|526170_526671_+|nitroreductase-family-protein
MSIIYRRRSIRKYQKKDVPDELVKEIIRAAMHAPSACNQQPWHFVVIRNEETKKKIAEIHPHAQMSAEAPVVILVCGDPTLKKCKGYWVQDCSAAVENLLLRATELGLGAVWCGVYPREERVKAFRELLGIPEHVVPFAIVPVGYPAEQPAQVDRFKPERIHYEKW
>NZ_CP003409.1|WP_004083204.1|526796_527348_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MYVNRIGTFRDHPDLYGVSVYFQGCDAKPKCYMCHNPETWHLSEEYKRPSEVVTKIIDEKLSSLLRYFPKAALVFLGGEPLAPYNREEMLSLSKMFKEKYGERLTVVLFTWRLPKDIVKENLLKYVQYVDEFVMGRYLHTYRRDGFPASKNQIHIDRRTFERMIEAVLRRGHYEGSVFVRKRI
>NZ_CP003409.1|WP_038033536.1|527313_529269_+|anaerobic-ribonucleoside-triphosphate-reductase
MKVQYSFEREFEELMSDLLSKYGYEMFQMDGLGDQLDVVKFTEDFVRRGIIESTIDANANVRVTNISTYFIEISKPHTYLYSLYRIWQKMKEMFGKGVADEFVEAQINGAVYLHDRHHAALMPYCFAYTLKPIVEKGLPFIKTIKSEPAKHLSTFIQHVIQFVMFASNQSSGAVGLPDFFVWMWYFVKKDLKEGIIPRDKLDWYIEQHFQILTYSLNQPIRTTQSPYTNFTYLDRNYIKAIFEGERYPDGSLITDHVEDIIALQKHYWEWVSRERERQMFTFPVLTASLLYKDGKFLDEDSARFINKINMKWQDTNWYISDSIDAVASCCRLTSSTQTLKKFSLSSEEEEKLKGRMNSIGGSDLNIGSFKVITMNLPRIALESGGDREKYLQILRHRVQLIKKALAAVREIIKERISEGLLPLYENGLMLLNRQYGTIGVTGVWESASIMGLTTEDIDGLKYTEEGEVFVDNVLDTIREEAEKGYHEYGFTFNIEQVPAEKAAVTLAQKDRFLFGEKQPFEIYSNQWVPLMANTDVLNRIRYSGKWDKKVSGGAILHINLGESFKTEEESFNMVKMIADMGVMYFAFNTKISVCEDGHAFYGERCPACGKAKVDEYMRIVGYLVPVSAFNKERREIEYPRRQFYDSLTIRR
>NZ_CP003409.1|WP_038033534.1|529350_530316_+|redoxin-domain-containing-protein
MRVRHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGCTREAVEFSKENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLIEEDLPLNKHIEWRRARRALKKDRVPREELELLIKAAHLAPSCMNNQPWRFVVVDEEELLKKIHEALPGGNYWMKNAPALIAVHSKKDFDCALPDNRDYFLFDTGLAVGNLLVQATQMGLVAHPVAGYDPVKVKEILKIPEDHVLITLIAVGYLGDESELSEKHRELERSERVRKELSEIVRWNL
>NZ_CP003409.1|WP_004083210.1|530312_531323_-|ABC-transporter-permease
MSEFLALFSAMWKESWRDKISTFFSIAFPVMFLLIFGFLFGGSGNSVKTAVVTVDYDLSDFGDVYTSLEELKGYYHEVAVVEKERIIFIRNTTDEYYQSLLDSWEISLKNKVTRLLNGLNPVIMVKKEVLKTARELTSFDYTLTGVIAVSLLSIGLFGTVDVFSRYRERGFLKRLKATPVGNFSFVFGLISARMFYGILSTALIMLLGTLIFKASYELNVFLFLISVVSSVLSFIALGALISILFKKSDVATDAAVILFTIMMFLTGVYFPVSFLPDYLRVVSYFLPVKYGVELIRYSLGFEIFPFSRYLITAVIMFLAGLMFVFYTASLVLRKED
>NZ_CP003409.1|WP_011943166.1|532396_533302_-|ABC-transporter-ATP-binding-protein
MVVLHSKGGFFLEILKVVDLKKHYGDVKAVDGISFTVERGTVFSFLGPNGAGKTTTVEILESLRKKDSGEIYYFGERKDVLDRETKRKIGVCLQKSAFFENLTVWETLKLFRGLYGTGLDLKEVMGLFSLENIEKKMVKTLSGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQARRQIWDTIEHFKNLGKTIFLTTHYMEEAERLSDHVCIIDHGKIIAEGTPSSLISSSGLKTVVEFDCDQDVNVRYLEKKENHYVVETDAPEELIKDLLKNWNVSNIVIRKPNLEDVFLKLTGRDLRE

Crispr_ID: NZ_CP003409_2

• CRISPR_ID: NZ_CP003409_2
• CRISPR_location: 533397-534572
• CRISPR_type: Orphan
• Repeat_type: III-A
• Spacer_info: 17 spacers

Consensus repeat of NZ_CP003409_2

Consensus_repeat	Method
GTTTCCATACCTCTAAGGAACTATTGAAAC	CRISPRCasFinder
GTTTCCATACCCTCTAAGGAACTATTGAAAC	CRT
CAATAGTTCCTTAGAGGTATGGAAAC	PILER-CR
GTTTCCATACCTCTAAGGAACTATTGAAAC	CRISPRCasFinder

spacers of NZ_CP003409_2

>2.1|533427|37|NZ_CP003409|CRISPRCasFinder,CRT
TCGCAAAGAAATTCGAAACATTCGACGGAAAAATCGT
>2.2|533494|36|NZ_CP003409|CRISPRCasFinder,CRT
TCGGTTTGTGCACTATCACTTCTCCGCTTGAGAGCG
>2.3|533560|36|NZ_CP003409|CRISPRCasFinder,CRT
CCTGCTTAACGATATTATCTCAACAAAGCTTCTGGA
>2.4|533626|35|NZ_CP003409|CRISPRCasFinder,CRT
CTTAGGTCGTACCAATTAACACCATCTATTTTGCA
>2.5|533691|36|NZ_CP003409|CRISPRCasFinder,CRT
CGATGTCGCCGCCAAGTATTTCAGGGGTTTATCGGA
>2.6|533757|36|NZ_CP003409|CRISPRCasFinder,CRT
ATTCCCTATGCCTCTTGACATCTATAGCTATTCATG
>2.7|533823|36|NZ_CP003409|CRISPRCasFinder,CRT
TGTTCTGTTGTGGGATCGTATTTGAACTCACTCTCT
>2.8|533889|40|NZ_CP003409|CRT
GTGGGAAGGCGTGGACGTCATATTCATCGCACATTCCGCG
>2.9|533959|39|NZ_CP003409|CRT
CCGTGCTTGATGTCGTAGGCATCAGGGTTATGATGCCGA
>2.10|534028|40|NZ_CP003409|CRT,CRISPRCasFinder
GTCGATGTTCTTTAGGCGGATATAGATTTATCTCTACTTC
>2.11|534098|41|NZ_CP003409|CRT,CRISPRCasFinder
TGCTCTTCTGCCCCGGGGTACACAAAAATAAGTGTTGGCCG
>2.12|534169|38|NZ_CP003409|CRT,CRISPRCasFinder
CTGGCAGGAATGTATGCACCCGCCGCCCACAACTCCAG
>2.13|534237|37|NZ_CP003409|CRT,CRISPRCasFinder
CACCCGCAAGAGCACAGTCTATTACGCAGACAATTTT
>2.14|534304|37|NZ_CP003409|CRT,CRISPRCasFinder
ATGTATCAGTAGAAGGAAATTATGTAAGTCCATATGA
>2.15|534371|37|NZ_CP003409|CRT,CRISPRCasFinder
CCTCCACGTTGGGATTGGGATACCTCAAAGGGAATAT
>2.16|534438|37|NZ_CP003409|CRT,CRISPRCasFinder
CTGGTAAGTTTCATTGTAGATAAGGTATTCTTACACC
>2.17|534505|38|NZ_CP003409|CRT,CRISPRCasFinder
CTCCTACCGGTAAATGGTTCTTCGTTGTTCTCATCTTG
>2.18|533491|40|NZ_CP003409|PILER-CR
AAACTCGGTTTGTGCACTATCACTTCTCCGCTTGAGAGCG
>2.19|533558|40|NZ_CP003409|PILER-CR
AAACCCTGCTTAACGATATTATCTCAACAAAGCTTCTGGA
>2.20|533625|39|NZ_CP003409|PILER-CR
AAACCTTAGGTCGTACCAATTAACACCATCTATTTTGCA
>2.21|533691|40|NZ_CP003409|PILER-CR
AAACCGATGTCGCCGCCAAGTATTTCAGGGGTTTATCGGA
>2.22|533758|40|NZ_CP003409|PILER-CR
AAACATTCCCTATGCCTCTTGACATCTATAGCTATTCATG
>2.23|533825|40|NZ_CP003409|PILER-CR
AAACTGTTCTGTTGTGGGATCGTATTTGAACTCACTCTCT
>2.24|533892|44|NZ_CP003409|PILER-CR
AAACGTGGGAAGGCGTGGACGTCATATTCATCGCACATTCCGCG
>2.25|533963|42|NZ_CP003409|PILER-CR
AAACCGTGCTTGATGTCGTAGGCATCAGGGTTATGATGCCGA
>2.26|534032|44|NZ_CP003409|PILER-CR
AAACGTCGATGTTCTTTAGGCGGATATAGATTTATCTCTACTTC
>2.27|534103|45|NZ_CP003409|PILER-CR
AAACTGCTCTTCTGCCCCGGGGTACACAAAAATAAGTGTTGGCCG
>2.28|534175|42|NZ_CP003409|PILER-CR
AAACCTGGCAGGAATGTATGCACCCGCCGCCCACAACTCCAG
>2.29|534244|41|NZ_CP003409|PILER-CR
AAACCACCCGCAAGAGCACAGTCTATTACGCAGACAATTTT
>2.30|534312|41|NZ_CP003409|PILER-CR
AAACATGTATCAGTAGAAGGAAATTATGTAAGTCCATATGA
>2.31|534380|41|NZ_CP003409|PILER-CR
TTACCCTCCACGTTGGGATTGGGATACCTCAAAGGGAATAT
>2.32|534448|41|NZ_CP003409|PILER-CR
AAACCTGGTAAGTTTCATTGTAGATAAGGTATTCTTACACC
>2.33|534516|41|NZ_CP003409|PILER-CR
TAAACTCCTACCGGTAAATGGTTCTTCGTTGTTCTCATCTT

CRISPR arrays and Neighbor proteins around NZ_CP003409_2

CRISPR arrays

The CRISPR arrays of NZ_CP003409_2

>merge|NZ_CP003409|2|533397-534572|CRISPRCasFinder,CRT,PILER-CR,CRISPRCasFinder
GTTTCCGTACCTCTAAGGAAGTATTGAAACTCGCAAAGAAATTCGAAACATTCGACGGAAAAATCGTGTTTCCATACCTCTAAGGAACTATTGAAACTCGGTTTGTGCACTATCACTTCTCCGCTTGAGAGCGGTTTCCATACCTCTAAGGAACTATTGAAACCCTGCTTAACGATATTATCTCAACAAAGCTTCTGGAGTTTCCATACCTCTAAGGAACTATTGAAACCTTAGGTCGTACCAATTAACACCATCTATTTTGCAGTTTCCATACCTCTAAGGAACTATTGAAACCGATGTCGCCGCCAAGTATTTCAGGGGTTTATCGGAGTTTCCATACCTCTAAGGAACTATTGAAACATTCCCTATGCCTCTTGACATCTATAGCTATTCATGGTTTCCATACCTCTAAGGAACTATTGAAACTGTTCTGTTGTGGGATCGTATTTGAACTCACTCTCTGTTTCCATACCTCTAAGGAACTATTGAAACGTGGGAAGGCGTGGACGTCATATTCATCGCACATTCCGCGTCTTCCATACCTCTAGAGGAACTATTGAAACCGTGCTTGATGTCGTAGGCATCAGGGTTATGATGCCGAGTTTCCATACCTCTAAGGAACTATTGAAACGTCGATGTTCTTTAGGCGGATATAGATTTATCTCTACTTCGTTTCCATACCTCTAAGGAACTATTGAAACTGCTCTTCTGCCCCGGGGTACACAAAAATAAGTGTTGGCCGGTTTCCATACCTCTAAGGAACTATTGAAACCTGGCAGGAATGTATGCACCCGCCGCCCACAACTCCAGGTTTCCATACCTCTAAGGAACTATTGAAACCACCCGCAAGAGCACAGTCTATTACGCAGACAATTTTGTTTCCATACCTCTAAGGAACTATTGAAACATGTATCAGTAGAAGGAAATTATGTAAGTCCATATGAGTTTCCATACCTCTAAGGAACTATTGTTACCCTCCACGTTGGGATTGGGATACCTCAAAGGGAATATGTTTCCATACCTCTAAGGAACTATTGAAACCTGGTAAGTTTCATTGTAGATAAGGTATTCTTACACCGTTTCCATACCTCTAAGGAACTATTGTAAACTCCTACCGGTAAATGGTTCTTCGTTGTTCTCATCTTGTTTCCATACCTTCTAAGGAACTATTGAAAC

>NZ_CP003409|2|2|533397-533889|CRISPRCasFinder
GTTTCCGTACCTCTAAGGAAGTATTGAAAC	TCGCAAAGAAATTCGAAACATTCGACGGAAAAATCGT
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCGGTTTGTGCACTATCACTTCTCCGCTTGAGAGCG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CCTGCTTAACGATATTATCTCAACAAAGCTTCTGGA
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTTAGGTCGTACCAATTAACACCATCTATTTTGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	CGATGTCGCCGCCAAGTATTTCAGGGGTTTATCGGA
GTTTCCATACCTCTAAGGAACTATTGAAAC	ATTCCCTATGCCTCTTGACATCTATAGCTATTCATG
GTTTCCATACCTCTAAGGAACTATTGAAAC	TGTTCTGTTGTGGGATCGTATTTGAACTCACTCTCT
GTTTCCATACCTCTAAGGAACTATTGAAACGTGGGAAGGCGTGGACGTCATATTCATCGCACATTCCGCGTCTTCCATACCTCTAGAGGAACTATTGAAACCGTGCTTGATGTCGTAGGCATCAGGGTTATGATGCCGAGTTTCCATACCTCTAAGGAACTATTGAAAC	GTCGATGTTCTTTAGGCGGATATAGATTTATCTCTACTTC
GTTTCCATACCTCTAAGGAACTATTGAAAC	TGCTCTTCTGCCCCGGGGTACACAAAAATAAGTGTTGGCCG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTGGCAGGAATGTATGCACCCGCCGCCCACAACTCCAG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CACCCGCAAGAGCACAGTCTATTACGCAGACAATTTT
GTTTCCATACCTCTAAGGAACTATTGAAAC	ATGTATCAGTAGAAGGAAATTATGTAAGTCCATATGA
GTTTCCATACCTCTAAGGAACTATTGTTAC	CCTCCACGTTGGGATTGGGATACCTCAAAGGGAATAT
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTGGTAAGTTTCATTGTAGATAAGGTATTCTTACACC
GTTTCCATACCTCTAAGGAACTATTGTAAA	CTCCTACCGGTAAATGGTTCTTCGTTGTTCTCATCTTG


>NZ_CP003409|2|2|533397-534572|CRT
GTTTCCGTACCTCTAAGGAAGTATTGAAAC	TCGCAAAGAAATTCGAAACATTCGACGGAAAAATCGT
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCGGTTTGTGCACTATCACTTCTCCGCTTGAGAGCG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CCTGCTTAACGATATTATCTCAACAAAGCTTCTGGA
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTTAGGTCGTACCAATTAACACCATCTATTTTGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	CGATGTCGCCGCCAAGTATTTCAGGGGTTTATCGGA
GTTTCCATACCTCTAAGGAACTATTGAAAC	ATTCCCTATGCCTCTTGACATCTATAGCTATTCATG
GTTTCCATACCTCTAAGGAACTATTGAAAC	TGTTCTGTTGTGGGATCGTATTTGAACTCACTCTCT
GTTTCCATACCTCTAAGGAACTATTGAAAC	GTGGGAAGGCGTGGACGTCATATTCATCGCACATTCCGCG
TCTTCCATACCTCTAGAGGAACTATTGAAA	CCGTGCTTGATGTCGTAGGCATCAGGGTTATGATGCCGA
GTTTCCATACCTCTAAGGAACTATTGAAAC	GTCGATGTTCTTTAGGCGGATATAGATTTATCTCTACTTC
GTTTCCATACCTCTAAGGAACTATTGAAAC	TGCTCTTCTGCCCCGGGGTACACAAAAATAAGTGTTGGCCG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTGGCAGGAATGTATGCACCCGCCGCCCACAACTCCAG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CACCCGCAAGAGCACAGTCTATTACGCAGACAATTTT
GTTTCCATACCTCTAAGGAACTATTGAAAC	ATGTATCAGTAGAAGGAAATTATGTAAGTCCATATGA
GTTTCCATACCTCTAAGGAACTATTGTTAC	CCTCCACGTTGGGATTGGGATACCTCAAAGGGAATAT
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTGGTAAGTTTCATTGTAGATAAGGTATTCTTACACC
GTTTCCATACCTCTAAGGAACTATTGTAAA	CTCCTACCGGTAAATGGTTCTTCGTTGTTCTCATCTTG
TTTCCATACCTTCTAAGGAACTATTGAAAC

>NZ_CP003409|2|2|533464-534568|PILER-CR
GTTTCCATACCTCTAAGGAACTATTGA	AACTCGGTTTGTGCACTATCACTTCTCCGCTTGAGAGCGG
TTTCCATACCTCTAAGGAACTATTGAA	ACCCTGCTTAACGATATTATCTCAACAAAGCTTCTGGAGT
TTCCATACCTCTAAGGAACTATTGAAA	CCTTAGGTCGTACCAATTAACACCATCTATTTTGCAGTT
TCCATACCTCTAAGGAACTATTGAAAC	CGATGTCGCCGCCAAGTATTTCAGGGGTTTATCGGAGTTT
CCATACCTCTAAGGAACTATTGAAACA	TTCCCTATGCCTCTTGACATCTATAGCTATTCATGGTTTC
CATACCTCTAAGGAACTATTGAAACTG	TTCTGTTGTGGGATCGTATTTGAACTCACTCTCTGTTTCC
ATACCTCTAAGGAACTATTGAAACGTG	GGAAGGCGTGGACGTCATATTCATCGCACATTCCGCGTCTTCCA
TACCTCTAGAGGAACTATTGAAACCGT	GCTTGATGTCGTAGGCATCAGGGTTATGATGCCGAGTTTCCA
TACCTCTAAGGAACTATTGAAACGTCG	ATGTTCTTTAGGCGGATATAGATTTATCTCTACTTCGTTTCCAT
ACCTCTAAGGAACTATTGAAACTGCTC	TTCTGCCCCGGGGTACACAAAAATAAGTGTTGGCCGGTTTCCATA
CCTCTAAGGAACTATTGAAACCTGGCA	GGAATGTATGCACCCGCCGCCCACAACTCCAGGTTTCCATAC
CTCTAAGGAACTATTGAAACCACCCGC	AAGAGCACAGTCTATTACGCAGACAATTTTGTTTCCATACC
TCTAAGGAACTATTGAAACATGTATCA	GTAGAAGGAAATTATGTAAGTCCATATGAGTTTCCATACCT
CTAAGGAACTATTGTTACCCTCCACGT	TGGGATTGGGATACCTCAAAGGGAATATGTTTCCATACCTC
TAAGGAACTATTGAAACCTGGTAAGTT	TCATTGTAGATAAGGTATTCTTACACCGTTTCCATACCTCT
AAGGAACTATTGTAAACTCCTACCGGT	AAATGGTTCTTCGTTGTTCTCATCTTGTTTCCATACCTTCT
AAGGAACTATTG

>NZ_CP003409|2|3|533998-534572|CRISPRCasFinder
	TCGCAAAGAAATTCGAAACATTCGACGGAAAAATCGT
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCGGTTTGTGCACTATCACTTCTCCGCTTGAGAGCG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CCTGCTTAACGATATTATCTCAACAAAGCTTCTGGA
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTTAGGTCGTACCAATTAACACCATCTATTTTGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	CGATGTCGCCGCCAAGTATTTCAGGGGTTTATCGGA
GTTTCCATACCTCTAAGGAACTATTGAAAC	ATTCCCTATGCCTCTTGACATCTATAGCTATTCATG
GTTTCCATACCTCTAAGGAACTATTGAAAC	TGTTCTGTTGTGGGATCGTATTTGAACTCACTCTCT
GTTTCCATACCTCTAAGGAACTATTGAAACGTGGGAAGGCGTGGACGTCATATTCATCGCACATTCCGCGTCTTCCATACCTCTAGAGGAACTATTGAAACCGTGCTTGATGTCGTAGGCATCAGGGTTATGATGCCGAGTTTCCATACCTCTAAGGAACTATTGAAAC	GTCGATGTTCTTTAGGCGGATATAGATTTATCTCTACTTC
GTTTCCATACCTCTAAGGAACTATTGAAAC	TGCTCTTCTGCCCCGGGGTACACAAAAATAAGTGTTGGCCG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTGGCAGGAATGTATGCACCCGCCGCCCACAACTCCAG
GTTTCCATACCTCTAAGGAACTATTGAAAC	CACCCGCAAGAGCACAGTCTATTACGCAGACAATTTT
GTTTCCATACCTCTAAGGAACTATTGAAAC	ATGTATCAGTAGAAGGAAATTATGTAAGTCCATATGA
GTTTCCATACCTCTAAGGAACTATTGTTAC	CCTCCACGTTGGGATTGGGATACCTCAAAGGGAATAT
GTTTCCATACCTCTAAGGAACTATTGAAAC	CTGGTAAGTTTCATTGTAGATAAGGTATTCTTACACC
GTTTCCATACCTCTAAGGAACTATTGTAAA	CTCCTACCGGTAAATGGTTCTTCGTTGTTCTCATCTTG
TTTCCATACCTTCTAAGGAACTATTGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP003409.1|WP_004083185.1|542093_542552_-|arginine-repressor	unknown	unknown	gnl|CDD|130592
NZ_CP003409.1|WP_004083204.1|526796_527348_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	unknown	unknown	gnl|CDD|274317
NZ_CP003409.1|WP_038033536.1|527313_529269_+|anaerobic-ribonucleoside-triphosphate-reductase	unknown	unknown	gnl|CDD|181342
NZ_CP003409.1|WP_012310618.1|543448_543892_+|transcriptional-regulator	unknown	unknown	gnl|CDD|224237
NZ_CP003409.1|WP_004083197.1|523772_524108_+|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl|CDD|223672
NZ_CP003409.1|WP_011943172.1|543901_545011_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NZ_CP003409.1|WP_038033526.1|545150_547133_-|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|223910
NZ_CP003409.1|WP_038051465.1|535198_535927_+|sulfite-exporter-TauE/SafE-family-protein	unknown	unknown	gnl|CDD|376667
NZ_CP003409.1|WP_038033537.1|526170_526671_+|nitroreductase-family-protein	unknown	unknown	gnl|CDD|380325
NZ_CP003409.1|WP_011943166.1|532396_533302_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP003409.1|WP_004083187.1|537077_538868_-|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|234715
NZ_CP003409.1|WP_038033529.1|539101_542104_+|efflux-RND-transporter-permease-subunit	unknown	unknown	gnl|CDD|223911
NZ_CP003409.1|WP_008193527.1|536001_536589_+|phosphate-propanoyltransferase	unknown	unknown	gnl|CDD|237899
NZ_CP003409.1|WP_004083210.1|530312_531323_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|223912
NZ_CP003409.1|WP_038033540.1|524153_525503_+|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl|CDD|273568
NZ_CP003409.1|WP_038033541.1|521342_522308_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|223318
NZ_CP003409.1|WP_011943170.1|542723_543452_+|KaiC-domain-containing-protein	unknown	unknown	gnl|CDD|235281
NZ_CP003409.1|WP_038033534.1|529350_530316_+|redoxin-domain-containing-protein	unknown	unknown	gnl|CDD|380315
NZ_CP003409.1|WP_004083200.1|525479_526142_-|endonuclease-III-domain-containing-protein	unknown	unknown	gnl|CDD|225140
NZ_CP003409.1|WP_004083188.1|536618_537062_-|Hsp20/alpha-crystallin-family-protein	unknown	unknown	gnl|CDD|223149

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP003409.1|WP_004083185.1|542093_542552_-|arginine-repressor	gnl|CDD|130592	TIGR01529, Arginine_repressor., arginine repressor. This model includes most members of the arginine-responsive transcriptional regulator family ArgR. This hexameric protein binds DNA at its amino end to repress arginine biosyntheis or activate arginine catabolism. Some species have several ArgR paralogs. In a neighbor-joining tree, some of these paralogous sequences show long branches and differ significantly in an otherwise well-conserved C-terminal region motif GT[VIL][AC]GDDT. These paralogs are excluded from the seed and score in the gray zone of this model, between trusted and noise cutoffs. [Amino acid biosynthesis, Glutamate family, Regulatory functions, DNA interactions].	1.02883e-68
NZ_CP003409.1|WP_004083204.1|526796_527348_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein	gnl|CDD|274317	TIGR02826, hypothetical_protein, anaerobic ribonucleoside-triphosphate reductase activating protein. Members of this family represent a set of radical SAM enzymes related to, yet architecturally different from, the activating protein for the glycine radical-containing, oxygen-sensitive ribonucleoside-triphosphate reductase (RNR) as described in model TIGR02491. Members of this family are found paired with members of a similarly divergent set of anaerobic ribonucleoside-triphosphate reductases. Identification of this protein as an RNR activitating protein is partly from pairing with a candidate RNR. It is further supported by our finding that upstream of these operons are examples of a conserved regulatory element (described Rodionov and Gelfand) that is found in nearly all bacteria and that occurs specifically upstream of operons for all three classes of RNR genes. [Purines, pyrimidines, nucleosides, and nucleotides, 2'-Deoxyribonucleotide metabolism].	2.14837e-67
NZ_CP003409.1|WP_038033536.1|527313_529269_+|anaerobic-ribonucleoside-triphosphate-reductase	gnl|CDD|181342	PRK08271, PRK08271, anaerobic ribonucleoside triphosphate reductase; Provisional.	0
NZ_CP003409.1|WP_012310618.1|543448_543892_+|transcriptional-regulator	gnl|CDD|224237	COG1318, COG1318, Predicted transcriptional regulators [Transcription].	3.53308e-38
NZ_CP003409.1|WP_004083197.1|523772_524108_+|carboxymuconolactone-decarboxylase-family-protein	gnl|CDD|223672	COG0599, COG0599, Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown].	6.03237e-20
NZ_CP003409.1|WP_011943172.1|543901_545011_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	6.88254e-38
NZ_CP003409.1|WP_038033526.1|545150_547133_-|methyl-accepting-chemotaxis-protein	gnl|CDD|223910	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].	5.79444e-68
NZ_CP003409.1|WP_038051465.1|535198_535927_+|sulfite-exporter-TauE/SafE-family-protein	gnl|CDD|376667	pfam01925, TauE, Sulfite exporter TauE/SafE. This is a family of integral membrane proteins where the alignment appears to contain two duplicated modules of three transmembrane helices. The proteins are involved in the transport of anions across the cytoplasmic membrane during taurine metabolism as an exporter of sulfoacetate. This family used to be known as DUF81.	2.66145e-25
NZ_CP003409.1|WP_038033537.1|526170_526671_+|nitroreductase-family-protein	gnl|CDD|380325	cd02150, nitroreductase, nitroreductase family protein. A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers.	1.36347e-95
NZ_CP003409.1|WP_011943166.1|532396_533302_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.87897e-98
NZ_CP003409.1|WP_004083187.1|537077_538868_-|molecular-chaperone-DnaK	gnl|CDD|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP003409.1|WP_038033529.1|539101_542104_+|efflux-RND-transporter-permease-subunit	gnl|CDD|223911	COG0841, AcrB, Cation/multidrug efflux pump [Defense mechanisms].	0
NZ_CP003409.1|WP_008193527.1|536001_536589_+|phosphate-propanoyltransferase	gnl|CDD|237899	PRK15070, PRK15070, phosphate propanoyltransferase.	5.00867e-130
NZ_CP003409.1|WP_004083210.1|530312_531323_-|ABC-transporter-permease	gnl|CDD|223912	COG0842, COG0842, ABC-type multidrug transport system, permease component [Defense mechanisms].	1.74909e-16
NZ_CP003409.1|WP_038033540.1|524153_525503_+|dihydrolipoyl-dehydrogenase	gnl|CDD|273568	TIGR01350, Dihydrolipoyl_dehydrogenase, dihydrolipoamide dehydrogenase. This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.	0
NZ_CP003409.1|WP_038033541.1|521342_522308_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase	gnl|CDD|223318	COG0240, GpsA, Glycerol-3-phosphate dehydrogenase [Energy production and conversion].	1.8508e-156
NZ_CP003409.1|WP_011943170.1|542723_543452_+|KaiC-domain-containing-protein	gnl|CDD|235281	PRK04328, PRK04328, hypothetical protein; Provisional.	1.51705e-172
NZ_CP003409.1|WP_038033534.1|529350_530316_+|redoxin-domain-containing-protein	gnl|CDD|380315	cd02138, TdsD-like, nitroreductase similar to Burkholderia pseudomallei TdsD. A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to Burkholderia pseudomallei TdsD, may be involved in the processing of organosulfur compounds. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.	5.95669e-81
NZ_CP003409.1|WP_004083200.1|525479_526142_-|endonuclease-III-domain-containing-protein	gnl|CDD|225140	COG2231, COG2231, Uncharacterized protein related to Endonuclease III [DNA replication, recombination, and repair].	5.31762e-96
NZ_CP003409.1|WP_004083188.1|536618_537062_-|Hsp20/alpha-crystallin-family-protein	gnl|CDD|223149	COG0071, IbpA, Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones].	7.33553e-35

Protein sequences

>NZ_CP003409.1|WP_011943166.1|532396_533302_-|ABC-transporter-ATP-binding-protein
MVVLHSKGGFFLEILKVVDLKKHYGDVKAVDGISFTVERGTVFSFLGPNGAGKTTTVEILESLRKKDSGEIYYFGERKDVLDRETKRKIGVCLQKSAFFENLTVWETLKLFRGLYGTGLDLKEVMGLFSLENIEKKMVKTLSGGQLQRLAVAVAFINDPEIVFLDEPTTGLDPQARRQIWDTIEHFKNLGKTIFLTTHYMEEAERLSDHVCIIDHGKIIAEGTPSSLISSSGLKTVVEFDCDQDVNVRYLEKKENHYVVETDAPEELIKDLLKNWNVSNIVIRKPNLEDVFLKLTGRDLRE
>NZ_CP003409.1|WP_004083210.1|530312_531323_-|ABC-transporter-permease
MSEFLALFSAMWKESWRDKISTFFSIAFPVMFLLIFGFLFGGSGNSVKTAVVTVDYDLSDFGDVYTSLEELKGYYHEVAVVEKERIIFIRNTTDEYYQSLLDSWEISLKNKVTRLLNGLNPVIMVKKEVLKTARELTSFDYTLTGVIAVSLLSIGLFGTVDVFSRYRERGFLKRLKATPVGNFSFVFGLISARMFYGILSTALIMLLGTLIFKASYELNVFLFLISVVSSVLSFIALGALISILFKKSDVATDAAVILFTIMMFLTGVYFPVSFLPDYLRVVSYFLPVKYGVELIRYSLGFEIFPFSRYLITAVIMFLAGLMFVFYTASLVLRKED
>NZ_CP003409.1|WP_038033534.1|529350_530316_+|redoxin-domain-containing-protein
MRVRHFELLTDEGKTFTHVDLYGKYTILFFFPKAGTSGCTREAVEFSKENFEKAQVVGISRDSVEALKRFKEKNDLKVTLLSDPEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRLIEEDLPLNKHIEWRRARRALKKDRVPREELELLIKAAHLAPSCMNNQPWRFVVVDEEELLKKIHEALPGGNYWMKNAPALIAVHSKKDFDCALPDNRDYFLFDTGLAVGNLLVQATQMGLVAHPVAGYDPVKVKEILKIPEDHVLITLIAVGYLGDESELSEKHRELERSERVRKELSEIVRWNL
>NZ_CP003409.1|WP_038033536.1|527313_529269_+|anaerobic-ribonucleoside-triphosphate-reductase
MKVQYSFEREFEELMSDLLSKYGYEMFQMDGLGDQLDVVKFTEDFVRRGIIESTIDANANVRVTNISTYFIEISKPHTYLYSLYRIWQKMKEMFGKGVADEFVEAQINGAVYLHDRHHAALMPYCFAYTLKPIVEKGLPFIKTIKSEPAKHLSTFIQHVIQFVMFASNQSSGAVGLPDFFVWMWYFVKKDLKEGIIPRDKLDWYIEQHFQILTYSLNQPIRTTQSPYTNFTYLDRNYIKAIFEGERYPDGSLITDHVEDIIALQKHYWEWVSRERERQMFTFPVLTASLLYKDGKFLDEDSARFINKINMKWQDTNWYISDSIDAVASCCRLTSSTQTLKKFSLSSEEEEKLKGRMNSIGGSDLNIGSFKVITMNLPRIALESGGDREKYLQILRHRVQLIKKALAAVREIIKERISEGLLPLYENGLMLLNRQYGTIGVTGVWESASIMGLTTEDIDGLKYTEEGEVFVDNVLDTIREEAEKGYHEYGFTFNIEQVPAEKAAVTLAQKDRFLFGEKQPFEIYSNQWVPLMANTDVLNRIRYSGKWDKKVSGGAILHINLGESFKTEEESFNMVKMIADMGVMYFAFNTKISVCEDGHAFYGERCPACGKAKVDEYMRIVGYLVPVSAFNKERREIEYPRRQFYDSLTIRR
>NZ_CP003409.1|WP_004083204.1|526796_527348_+|anaerobic-ribonucleoside-triphosphate-reductase-activating-protein
MYVNRIGTFRDHPDLYGVSVYFQGCDAKPKCYMCHNPETWHLSEEYKRPSEVVTKIIDEKLSSLLRYFPKAALVFLGGEPLAPYNREEMLSLSKMFKEKYGERLTVVLFTWRLPKDIVKENLLKYVQYVDEFVMGRYLHTYRRDGFPASKNQIHIDRRTFERMIEAVLRRGHYEGSVFVRKRI
>NZ_CP003409.1|WP_038033537.1|526170_526671_+|nitroreductase-family-protein
MSIIYRRRSIRKYQKKDVPDELVKEIIRAAMHAPSACNQQPWHFVVIRNEETKKKIAEIHPHAQMSAEAPVVILVCGDPTLKKCKGYWVQDCSAAVENLLLRATELGLGAVWCGVYPREERVKAFRELLGIPEHVVPFAIVPVGYPAEQPAQVDRFKPERIHYEKW
>NZ_CP003409.1|WP_004083200.1|525479_526142_-|endonuclease-III-domain-containing-protein
MRLTELYRKLLEIHGSVGKWWPGTPEEIVITAVLTQNTNWKNVERAMENIKNEVKGNNLLKELDSLPEEKVAELIRPAGFFNIKTKRLKELLKFLKEYNYNLSRLRDLPTHILRERLLKIKGIGKETADAILLYALEKPVFVVDSYTRRLLKRIFNIELNDYDEVQKLFMTHYPEDVRLYQEFHGLIVEHAKKFCSKTPKCGVCPLKKECCHVSQMNGFS
>NZ_CP003409.1|WP_038033540.1|524153_525503_+|dihydrolipoyl-dehydrogenase
MYDAVIIGGGPGGYVCAIKLAQLGKKVALVEKDALGGTCTNRGCIPTKAMLTVSHLMDEMKEKASKYGLKVSGVEYDVAAIMKHVQKSVMMSRKGIEYLLKKNGVEVFKGTAVVENKNTVVVQETGEKLEAKNLVLAHGSVPSVFSPFDIDGVWTSDDVFNLKEFPKSLVIIGGGVIGVEFATFFGSFGVDVTIVEIAEHILPYEDSDVAEEVKKALKRKGVKILEKTKISSLSKVDDGFEVALENGETLKAEKVLLAAGRKPNIPEDVKALGVKIEKGVVTDSRMRTNVENVYAIGDIRSGIMLAHVAMYEGIVAAKNIAGEEEEMDYSAVPSIIFSSPEVASVGVREKDVNPEEVVISKFPVSANGRARTMLENIGFAKVIADKKDGTVLGMSIVSPSATDMIMEGVIAVKFRMKAEVLEKAIHPHPTLTETILGALEGVSGKPIHL
>NZ_CP003409.1|WP_004083197.1|523772_524108_+|carboxymuconolactone-decarboxylase-family-protein
MAAKEKLEQIQKQLQEIIGKAPEIGKFAEYVHAAESPKALDTKTKELISLGIAVAVRCEPCIVWHAGAAVRAGATEEEILDTIKVAVCMGGGPALMYGLKAYEIALEFLGK
>NZ_CP003409.1|WP_038033541.1|521342_522308_+|NAD(P)H-dependent-glycerol-3-phosphate-dehydrogenase
MRFFVLGAGSWGTVFAQILHENGEEVVLWARRKEIVGLINVSHTSPYVEESKITVRATNDLEEIKKEDILVIAIPVQYIREHLLRLPVKPSMVLNLSKGIEIKTGKRVSEIVEEILGCPYAVLSGPSHAEEVAKKLPTAVTLAGENSKELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGAFTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQSMRDLMRRSLKDEFWAS
>NZ_CP003409.1|WP_038051465.1|535198_535927_+|sulfite-exporter-TauE/SafE-family-protein
MIVLVFLGGILAGFLNVLAGGGSMITLPILTALGLGIDVANGTNRIAIILQNLVAIERFKAKKVLKIKEAILVALPAIVGAILGSSIAVQIEKEMLQKIVGVIFLVMAVSLVWKPRIWLEDRFVKRNWVLIYIVFFLIGIYGGFIQAGVGFLLMPAIALLLGYELVKTNAVKVFIVASYNIISLVIFILNGKVNFLYGFILALGNMTGAWLAATFSIKKGANWVRWIVFTAVIVVGIRYVFN
>NZ_CP003409.1|WP_008193527.1|536001_536589_+|phosphate-propanoyltransferase
MTKKEPGIIVGVSNRHVHLSKEDLEILFGKGYELTPIKDLRQPGQYAAKETVTIVGPKGAIENVRVLGPVRRETQVEISRTDAFKLGLRPPVRDSGDLEGTPGIVIIGPNGILVKEKGVIIAKRHIHMHPKDAEHYGVKDKDLVKVIVESGDRKLIFDDVLIRVREDFALEFHVDTDEANAAMLNTGDFVYIVEF
>NZ_CP003409.1|WP_004083188.1|536618_537062_-|Hsp20/alpha-crystallin-family-protein
MLLGRREDIFRPFRELQREIDRLFDDFFRTEVRPAKEFFAPDMDVYETDDEVVIEVEIPGIDRKDVKITVEENILKISGEKKLEREQKGKNYYYVERSAGKFERAIRLPDYVDVEKIKAEYKNGVLTIRVPKKEERKKKVIEVEVQE
>NZ_CP003409.1|WP_004083187.1|537077_538868_-|molecular-chaperone-DnaK
MAEKKEFVVGIDLGTTNSVIAWMKPDGTVEVIPNAEGSRVTPSVVAFTKSGEILVGEPAKRQMILNPERTIKSIKRKMGTDYKVRIDDKEYTPQEISAFILKKLKNDAEAYLGGEIKKAVITCPAYFNDAQRQATKEAGIIAGLEVLRIINEPTAAALAYGLDKAGKEEKVLVYDLGGGTFDVSILEIGEGVIEVIATAGNNHLGGDDFDQRLIDWMAEEFKKQHGIDLREDRQALQRLRDAAEKAKIELSTKMETDVSLPFIAVSPSGQPLHLEMRITRSLFESLTRDLVEMTRGPIEQALNDAKLSPQDIDEIILVGGMTRVPMVQRFIKEFFGKEPNKSVNPDEAVAIGAAIQAAILAGTEGAKGRDIVLVDVTPLTLGIEVKGGLFEPIIPRNTKIPVRKSKIFTTVEDGQTEVEIRVYQGERPIARENIFLGSFKLVGIPPAPRGVPQIEVTFDIDSDGIVHVSAKDLGSGKEQSMVVTGRHKLSEDEIKRMIEDAKRYEEQDKRLKEEIELKNRADDLAYSVEKTLKEHGDKIPADLKSRLEDMIRELRDAINRNDIPKVKMLFDDLQKESMKIGEYLYKSATGGETSNQ
>NZ_CP003409.1|WP_038033529.1|539101_542104_+|efflux-RND-transporter-permease-subunit
MKIAEISSRRPIAIFMPLTAVVFLGFISFQHLKLDLLPQIEYPYAAVITTYMGAGTEEVEELVTKPLEGYISSTPGVRRFTSMSMDSVSFILVEFDWNVKTSEAVGRLSRYVDLATRDLPEGANPVVVEFDPSLLPVYAFSTEDDYEDVVSKIKRLPEVASVEVMGKPEKIVEVILDQEKIKRFDVDPSLIETILSGNLVYPFGYVSDSEGNIYPVSVDGRFENIEDLKNTIVGFRGVKYQSLLQGKVPNILVPVRLRNIAEVNITNESVQGEVRVNGKKASLIAIYKRSGANTVKTVREIKRILRDSKINYIEAMNQAYYTERAIDNLLKNLLYGFIAAFVVVLIFLKDFTSTIVTSFSIPLSLTITFVLLYAFGLNLDTLTLGGLIMALGMLVDNSIVVFENIYRHRSLGDPIPDAARKGAGEVWLAILASTLTTVSVFLPMVFFTGFVVRLFKYFAIAFVFALSSSLFVSTVVVPAGTRWIKPRRGKLTEALQKHYRKALEWCLKRKKLVLVISFALVAISVIYLLSKPLGFLPSFQTNLMVIDVKLPSQSSYEKTTEAVEQIEDYLNKHRNEYKISSFDSEVGITNIYSQIMGRGQNEARIMVNLGGSRREFAKNREKLKNAISQLNIPEAKIEVLEQSQQIYEILGYPVTIEVRGDDLSLIQEKAKEIFERLRELQEVKKIQIRNSFEKEVLHVKIDRNKALMNGVVTGQVFLDLQTYLLGKKIGTLRTEEGTLPIVLKKAKSLSPEDLSKISLTGLKGDVSLGAVSNISRETLPSIVEHSDGERVVYVDLVSIEGSIGEVAKKVENLLNEIDLSGVKVEITGQKSFMDEAFSELQYVVYIAIALVYMILAAQFESFTLPFIIFFTIPFAVVGVAFAVFVNGYSLNVPVLVGLLTLSGTVVNNAIVMLTRIEQIRQEKGLLEATLEGAQSRLRPILMTTFTTIVALLPTALSHAEGSEIESPISWVVIFGMLISMLFTLFVIPVIYTAIRRKVRV
>NZ_CP003409.1|WP_004083185.1|542093_542552_-|arginine-repressor
MKISKKRRQELIRKIIHEKKISNQFQIVEELKKYGIKAVQPTVARDLKEIGAVKIMDESGNYVYKLLDETPVIDPWKELKRNFKSFVESIDRAGNLIVIKTIPGTASGIARVIDRLDIDEIVGTLAGDDTIFVAVRDPESCEKIVEKLSSIL
>NZ_CP003409.1|WP_011943170.1|542723_543452_+|KaiC-domain-containing-protein
MIKKVKTGIPGMDEILHGGIPERNIVLISGGPGTGKTIFSQQFIWNGLQMGEPGIYVALEEHPVQVKKNMEVFGWNVDPFEKEGKFAIVDAFTGGIGEYAEKEKYVVKDIDDVRELAEVLKRAVKETQAKRVVIDSVTTLYITKPAMARSIIFQLKRILSGLGCTSLFVSQVSVTEKGFGGPGVEHGVDGIIRLDLDEIDGELKRSLIVWKMRGTSHSMRRHPFEITDKGIVIHPSEGGEEK
>NZ_CP003409.1|WP_012310618.1|543448_543892_+|transcriptional-regulator
MKLNFNPVTKEEIHQLEIALLVGTLFRKEVLEEIRNSAERLTWVDSLAVAAGALARAKAGMTASEIAEELGRTEATIREHVKGETKAGKLVNETYELLKEGKLSVEGLIGEGIKVVTTTTGSDEKLQEVKKELEEIKQKLESVIQKL
>NZ_CP003409.1|WP_011943172.1|543901_545011_-|MFS-transporter
MFFLTNVFRSMGTMSFNLLIQLRMKEIGATLFMIGLLSSLQGAMNTFSNVFWGRISDKIGKRKVFIILSLVLASAFYPLYAVINVPSAFLFVSMIIAFFNGMYPPAAMALSSTAKRMSLGFSLYNSSNSLGMLLSRISIGFLLMFMDLKLAFVFFSIVVAVSVIPALGLKEEKIQKKKEEDFHFGRKVMEHGIWALYLGSLLRQMGTSGSMSLIAVYLNERFHYSASTIGFVTAVNPLIQIPSHFFFGKLVEKTDPKFISVLGIFMSSLVPFLMMIPENWAPVLAYAFLGASFGAFINGSNNFLGRRFHYLQRGRALGLLSSARFLGATIGPFLAGLLAEKSYSLMFSTLGLAVLSGGIVVLLFTKDGD
>NZ_CP003409.1|WP_038033526.1|545150_547133_-|methyl-accepting-chemotaxis-protein
MKNLPVFWKIMIIVLILGAGITFVGTLSTITIRSKMLEQTDMNLLTQSEGSADALWNFLQAHTQLVDLLSRDEGVINLYRDETNEEDVKSLFEKVLKSYPNVMNVYVGLKDGRMYLVPEQELPEGYDPRVRPWYKDAVAKLGKIVITDPYADASTGKTIITIAKAVQIGQEIVGVLGLDFDCSKLVDELFKKGVEKGYMSALVDENGTITLHSKKDYIGENIKDTDFFKKWHAGSESGVFGYVFDGIPRRTGYKKLPNGWIYAIVVPEEIVYSEVKESTVVLITITLVSLVAAIVFALFMSRRYISEPLKHLASISDKIAGGDLTVEIQLNSKDEIGKLGNALTHMVKSLREIALNIKNNSSEIKRNAESVASVAQEVSSTIEEVTSRVENVESNVSNTSASIQELTSGVEEVAASAQNVSRAAQDLSEKSTQVSESAKEGEKAIKEIVEMIKQARSRAEQTASVVEELNEHARNIGQILDTINSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEIRKLAEESKSATEKIGQILNQISQEVVKANEETRGTVQAVENISSSAEVVASQFDRIAQGISSIVSQIQNLAAIAEEQSAAAEEMSSAMDNASRSMVEVAKQMNEIAEAMKQQAKAVNTLSEAMNKLDQIAEKLEKGMEVFKL

Crispr_ID: NZ_CP003409_3

• CRISPR_ID: NZ_CP003409_3
• CRISPR_location: 566438-567196
• CRISPR_type: Orphan
• Repeat_type: III-A
• Spacer_info: 11 spacers

Consensus repeat of NZ_CP003409_3

Consensus_repeat	Method
GTTTCCATACCTCTAAGGAACTATTGAAAC	CRISPRCasFinder
GTTTCCATACCTCTAAGGAACTATTGAAAC	CRT
GTTTCAATAGTTCCTTAGAGGTATGGAAAC	PILER-CR

spacers of NZ_CP003409_3

>3.1|566468|35|NZ_CP003409|CRISPRCasFinder,CRT
TTAAGATGTCTATACCGGGCATTCTACAAAACAGC
>3.2|566533|36|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
AATTTGAGCCCGGGGAGGAGGATTTCGAATGGCTAC
>3.3|566599|37|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
GGGTAGAAGTTCCTGTTAATAGAGCTCAAGCCACACT
>3.4|566666|35|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
CAACTGGACGAACTCGCCGAAAGTCATAAAATGCA
>3.5|566731|36|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
TCATCCCTCTGTAGATGAAAAATCTCAGAAAGCTCA
>3.6|566797|36|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
TAGGTTGGGTGGTGTAGAATTTGACCTTTACCAGCA
>3.7|566863|36|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
GTTGGAAAGAGACGAAGAACTTATCAACATGATCAT
>3.8|566929|36|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
TAAACGCAAGAGTCGAAAAAGGTATCAAGAAAACCA
>3.9|566995|38|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
AGGAGGCGGTATTATGAAGTTGAGAGTGTATCGTATGT
>3.10|567063|38|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
GTTGTTAACTGGGCACGAGACTATTACTACTCATACCA
>3.11|567131|36|NZ_CP003409|CRISPRCasFinder,CRT,PILER-CR
TCTTCATCGAAAACACTTCTGCAAACAAGGGTGTTA

CRISPR arrays and Neighbor proteins around NZ_CP003409_3

CRISPR arrays

The CRISPR arrays of NZ_CP003409_3

>merge|NZ_CP003409|3|566438-567196|CRISPRCasFinder,CRT,PILER-CR
ATTTCCATGCCTCTAAGGAAGTATTGAAACTTAAGATGTCTATACCGGGCATTCTACAAAACAGCGTTTCCATACCTCTAAGGAACTATTGAAACAATTTGAGCCCGGGGAGGAGGATTTCGAATGGCTACGTTTCCATACCTCTAAGGAACTATTGAAACGGGTAGAAGTTCCTGTTAATAGAGCTCAAGCCACACTGTTTCCATACCTCTAAGGAACTATTGAAACCAACTGGACGAACTCGCCGAAAGTCATAAAATGCAGTTTCCATACCTCTAAGGAACTATTGAAACTCATCCCTCTGTAGATGAAAAATCTCAGAAAGCTCAGTTTCCATACCTCTAAGGAACTATTGAAACTAGGTTGGGTGGTGTAGAATTTGACCTTTACCAGCAGTTTCCATACCTCTAAGGAACTATTGAAACGTTGGAAAGAGACGAAGAACTTATCAACATGATCATGTTTCCATACCTCTAAGGAACTATTGAAACTAAACGCAAGAGTCGAAAAAGGTATCAAGAAAACCAGTTTCCATACCTCTAAGGAACTATTGAAACAGGAGGCGGTATTATGAAGTTGAGAGTGTATCGTATGTGTTTCCATACCTCTAAGGAACTATTGAAACGTTGTTAACTGGGCACGAGACTATTACTACTCATACCAGTTTCCATACCTCTAAGGAACTATTGAAACTCTTCATCGAAAACACTTCTGCAAACAAGGGTGTTAGTTTCCATACCTCTAAGGAACTATTGAAAC

>NZ_CP003409|3|4|566438-567196|CRISPRCasFinder
ATTTCCATGCCTCTAAGGAAGTATTGAAAC	TTAAGATGTCTATACCGGGCATTCTACAAAACAGC
GTTTCCATACCTCTAAGGAACTATTGAAAC	AATTTGAGCCCGGGGAGGAGGATTTCGAATGGCTAC
GTTTCCATACCTCTAAGGAACTATTGAAAC	GGGTAGAAGTTCCTGTTAATAGAGCTCAAGCCACACT
GTTTCCATACCTCTAAGGAACTATTGAAAC	CAACTGGACGAACTCGCCGAAAGTCATAAAATGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCATCCCTCTGTAGATGAAAAATCTCAGAAAGCTCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TAGGTTGGGTGGTGTAGAATTTGACCTTTACCAGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	GTTGGAAAGAGACGAAGAACTTATCAACATGATCAT
GTTTCCATACCTCTAAGGAACTATTGAAAC	TAAACGCAAGAGTCGAAAAAGGTATCAAGAAAACCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	AGGAGGCGGTATTATGAAGTTGAGAGTGTATCGTATGT
GTTTCCATACCTCTAAGGAACTATTGAAAC	GTTGTTAACTGGGCACGAGACTATTACTACTCATACCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCTTCATCGAAAACACTTCTGCAAACAAGGGTGTTA
GTTTCCATACCTCTAAGGAACTATTGAAAC

>NZ_CP003409|3|3|566438-567196|CRT
ATTTCCATGCCTCTAAGGAAGTATTGAAAC	TTAAGATGTCTATACCGGGCATTCTACAAAACAGC
GTTTCCATACCTCTAAGGAACTATTGAAAC	AATTTGAGCCCGGGGAGGAGGATTTCGAATGGCTAC
GTTTCCATACCTCTAAGGAACTATTGAAAC	GGGTAGAAGTTCCTGTTAATAGAGCTCAAGCCACACT
GTTTCCATACCTCTAAGGAACTATTGAAAC	CAACTGGACGAACTCGCCGAAAGTCATAAAATGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCATCCCTCTGTAGATGAAAAATCTCAGAAAGCTCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TAGGTTGGGTGGTGTAGAATTTGACCTTTACCAGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	GTTGGAAAGAGACGAAGAACTTATCAACATGATCAT
GTTTCCATACCTCTAAGGAACTATTGAAAC	TAAACGCAAGAGTCGAAAAAGGTATCAAGAAAACCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	AGGAGGCGGTATTATGAAGTTGAGAGTGTATCGTATGT
GTTTCCATACCTCTAAGGAACTATTGAAAC	GTTGTTAACTGGGCACGAGACTATTACTACTCATACCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCTTCATCGAAAACACTTCTGCAAACAAGGGTGTTA
GTTTCCATACCTCTAAGGAACTATTGAAAC

>NZ_CP003409|3|3|566503-567196|PILER-CR
GTTTCCATACCTCTAAGGAACTATTGAAAC	AATTTGAGCCCGGGGAGGAGGATTTCGAATGGCTAC
GTTTCCATACCTCTAAGGAACTATTGAAAC	GGGTAGAAGTTCCTGTTAATAGAGCTCAAGCCACACT
GTTTCCATACCTCTAAGGAACTATTGAAAC	CAACTGGACGAACTCGCCGAAAGTCATAAAATGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCATCCCTCTGTAGATGAAAAATCTCAGAAAGCTCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TAGGTTGGGTGGTGTAGAATTTGACCTTTACCAGCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	GTTGGAAAGAGACGAAGAACTTATCAACATGATCAT
GTTTCCATACCTCTAAGGAACTATTGAAAC	TAAACGCAAGAGTCGAAAAAGGTATCAAGAAAACCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	AGGAGGCGGTATTATGAAGTTGAGAGTGTATCGTATGT
GTTTCCATACCTCTAAGGAACTATTGAAAC	GTTGTTAACTGGGCACGAGACTATTACTACTCATACCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCTTCATCGAAAACACTTCTGCAAACAAGGGTGTTA
GTTTCCATACCTCTAAGGAACTATTGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP003409.1|WP_038033481.1|573417_574179_-|prephenate-dehydrogenase	unknown	unknown	gnl|CDD|223364
NZ_CP003409.1|WP_164819368.1|576702_576879_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_011943187.1|561197_562184_+|TolC-family-protein	unknown	unknown	gnl|CDD|224455
NZ_CP003409.1|WP_011943183.1|556266_557337_+|glycosyltransferase-family-4-protein	unknown	unknown	gnl|CDD|340831
NZ_CP003409.1|WP_011943195.1|571397_572159_-|shikimate-dehydrogenase	unknown	unknown	gnl|CDD|223247
NZ_CP003409.1|WP_012310631.1|563458_564466_+|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl|CDD|273776
NZ_CP003409.1|WP_011943196.1|572155_573421_-|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl|CDD|235037
NZ_CP003409.1|WP_004083125.1|574175_575192_-|3-deoxy-7-phosphoheptulonate-synthase	unknown	unknown	gnl|CDD|181535
NZ_CP003409.1|WP_128080910.1|558549_559719_-|iron-containing-alcohol-dehydrogenase	unknown	unknown	gnl|CDD|341465
NZ_CP003409.1|WP_038033486.1|562199_563462_+|TolC-family-protein	unknown	unknown	gnl|CDD|367035
NZ_CP003409.1|WP_039446204.1|559826_561032_-|threonine-ammonia-lyase	unknown	unknown	gnl|CDD|236182
NZ_CP003409.1|WP_012896285.1|568844_570323_-|bifunctional-shikimate-kinase-AroK/3-dehydroquinate-synthase-AroB	unknown	unknown	gnl|CDD|172457
NZ_CP003409.1|WP_004083158.1|558261_558468_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_038033483.1|565153_566368_+|FtsX-like-permease-family-protein	unknown	unknown	gnl|CDD|182528
NZ_CP003409.1|WP_011943194.1|570270_571401_-|chorismate-synthase	unknown	unknown	gnl|CDD|272865
NZ_CP003409.1|WP_008193575.1|564462_565167_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|213222
NZ_CP003409.1|WP_038033490.1|557350_558259_-|diacylglycerol-kinase-family-lipid-kinase	unknown	unknown	gnl|CDD|224513
NZ_CP003409.1|WP_011943191.1|567819_568422_+|LysE-family-transporter	unknown	unknown	gnl|CDD|280058
NZ_CP003409.1|WP_011943197.1|575448_576690_-|MFS-transporter	unknown	unknown	gnl|CDD|340863
NZ_CP003409.1|WP_011943198.1|576885_577386_-|hypothetical-protein	unknown	unknown	unknown

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP003409.1|WP_038033481.1|573417_574179_-|prephenate-dehydrogenase	gnl|CDD|223364	COG0287, TyrA, Prephenate dehydrogenase [Amino acid transport and metabolism].	1.65276e-64
NZ_CP003409.1|WP_011943187.1|561197_562184_+|TolC-family-protein	gnl|CDD|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	1.56892e-15
NZ_CP003409.1|WP_011943183.1|556266_557337_+|glycosyltransferase-family-4-protein	gnl|CDD|340831	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase. This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.	3.75297e-21
NZ_CP003409.1|WP_011943195.1|571397_572159_-|shikimate-dehydrogenase	gnl|CDD|223247	COG0169, AroE, Shikimate 5-dehydrogenase [Amino acid transport and metabolism].	1.6478e-82
NZ_CP003409.1|WP_012896285.1|568844_570323_-|bifunctional-shikimate-kinase-AroK/3-dehydroquinate-synthase-AroB	gnl|CDD|172457	PRK13951, PRK13951, bifunctional shikimate kinase AroK/3-dehydroquinate synthase AroB.	0
NZ_CP003409.1|WP_011943196.1|572155_573421_-|3-phosphoshikimate-1-carboxyvinyltransferase	gnl|CDD|235037	PRK02427, PRK02427, 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
NZ_CP003409.1|WP_004083125.1|574175_575192_-|3-deoxy-7-phosphoheptulonate-synthase	gnl|CDD|181535	PRK08673, PRK08673, 3-deoxy-7-phosphoheptulonate synthase; Reviewed.	0
NZ_CP003409.1|WP_128080910.1|558549_559719_-|iron-containing-alcohol-dehydrogenase	gnl|CDD|341465	cd08186, Fe-ADH-like, Iron-containing alcohol dehydrogenase. This family contains iron-containing alcohol dehydrogenase (ADH) which catalyzes the reduction of acetaldehyde to alcohol with NADP as cofactor. The ADH of hyperthermophilic archaeon Thermococcus hydrothermalis oxidizes a series of primary aliphatic and aromatic alcohols, preferentially from C2 to C8, but is also active towards methanol and glycerol, and is stereospecific for monoterpenes. It has been suggested that the type III ADHs in microorganisms are involved in acetaldehyde detoxication rather than in alcohol turnover.	0
NZ_CP003409.1|WP_038033486.1|562199_563462_+|TolC-family-protein	gnl|CDD|367035	pfam02321, OEP, Outer membrane efflux protein. The OEP family (Outer membrane efflux protein) form trimeric channels that allow export of a variety of substrates in Gram negative bacteria. Each member of this family is composed of two repeats. The trimeric channel is composed of a 12 stranded all beta sheet barrel that spans the outer membrane, and a long all helical barrel that spans the periplasm.	4.7086e-12
NZ_CP003409.1|WP_039446204.1|559826_561032_-|threonine-ammonia-lyase	gnl|CDD|236182	PRK08198, PRK08198, threonine dehydratase; Provisional.	0
NZ_CP003409.1|WP_011943197.1|575448_576690_-|MFS-transporter	gnl|CDD|340863	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters. This family is composed of Streptococcus pyogenes macrolide efflux protein A (MefA) and similar transporters, many of which remain uncharacterized. Some members may be multidrug resistance (MDR) transporters, which are drug/H+ antiporters (DHAs) that mediate the efflux of a variety of drugs and toxic compounds, conferring resistance to these compounds. MefA confers resistance to 14-membered macrolides including erythromycin and to 15-membered macrolides. It functions as an efflux pump to regulate intracellular macrolide levels. The MefA-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.14348e-72
NZ_CP003409.1|WP_038033483.1|565153_566368_+|FtsX-like-permease-family-protein	gnl|CDD|182528	PRK10535, PRK10535, macrolide ABC transporter ATP-binding protein/permease MacB.	2.22785e-53
NZ_CP003409.1|WP_011943194.1|570270_571401_-|chorismate-synthase	gnl|CDD|272865	TIGR00033, Chorismate_synthase, chorismate synthase. Homotetramer (noted in E.coli) suggests reason for good conservation. [Amino acid biosynthesis, Aromatic amino acid family].	6.61219e-168
NZ_CP003409.1|WP_008193575.1|564462_565167_+|ABC-transporter-ATP-binding-protein	gnl|CDD|213222	cd03255, ABC_MJ0796_LolCDE_FtsE, ATP-binding cassette domain of the transporters involved in export of lipoprotein and macrolide, and cell division protein. This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of lipoproteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyzes the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.	1.69942e-125
NZ_CP003409.1|WP_038033490.1|557350_558259_-|diacylglycerol-kinase-family-lipid-kinase	gnl|CDD|224513	COG1597, LCB5, Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase [Lipid metabolism / General function prediction only].	8.43665e-92
NZ_CP003409.1|WP_011943191.1|567819_568422_+|LysE-family-transporter	gnl|CDD|280058	pfam01810, LysE, LysE type translocator. This family consists of various hypothetical proteins and an l-lysine exporter LysE from Corynebacterium glutamicum which is proposed to be the first of a novel family of translocators. LysE exports l-lysine from the cell into the surrounding medium and is predicted to span the membrane six times. The physiological function of the exporter is to excrete excess l-Lysine as a result of natural flux imbalances or peptide hydrolysis; and also after artificial deregulation of l-Lysine biosynthesis as used by the biotechnology. industry for the production of l-lysine.	5.71854e-38
NZ_CP003409.1|WP_012310631.1|563458_564466_+|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl|CDD|273776	TIGR01730, COG0845:_Membrane-fusion_protein, RND family efflux transporter, MFP subunit. This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate].	4.16165e-34

Protein sequences

>NZ_CP003409.1|WP_038033483.1|565153_566368_+|FtsX-like-permease-family-protein
MEILKEVLRSLLANKMRTFLSMLGIVIGVTAVIMVMSLGAGMKESVTERLTSLGSNIIMITPGFTGGRGGTIAQSVESLEEDDVEDILKMCPSVDKAIGLVNGSFLVQYRETNTRSNVYSAPADIFHILNLKVSSGRTFSQEDNTANVAIIGQEVAYNLFGNENPLGKKIYLVQGNRKLVFEIIGIFERTGSILMFNPDNMILIPYETGKFRVFQTHGKVSMILATSKSADVAQRAVMEIDHLLYTKFHEEESYYNIINQQAILNVVSESVSIINLVLVAIAVVSLIVGGIGIMNIMLVSVVERTREIGIKMAIGASRLRILLEFLVESVVITFVAGAIGVALGILGSNTIVNTFGSQYGLKAVIDPLSVIVAFGVSASVGLFFGFYPAYRASRLSPIEALRYE
>NZ_CP003409.1|WP_008193575.1|564462_565167_+|ABC-transporter-ATP-binding-protein
MKKVMELVDVWKIYDLGEVKVEALRGVSFEVFEGEYVIIIGPSGSGKSTLLHILGCLDRPTKGKVLIEGEEVSRMGDRRLAQVRNRKIGFVFQSYNLLPRLTALENVELPMIYAGVPAKERKRRAKELLELVGLGDRLHHRPNQLSGGQQQRVAIARALANDPVFILADEPTGNLDTKTGEEILELFRKLHEMGKTLVVVTHNLEMVDEGTCIVRIRDGKIEGVERRGVVYGDT
>NZ_CP003409.1|WP_012310631.1|563458_564466_+|efflux-RND-transporter-periplasmic-adaptor-subunit
MKKWITLLIIAVLVVLVIVVIFLNRASAQTVSEKDATSTQAPVYLTYTVTKENETVEIVGQVTADTKKVTSKVSGDVLEIYVEEGDVVQVGQKIAKIDDTDYQISYLSALNSYKTSPTEINRLNLEKAKENLENTTVVSPVNGVVQSVNVDVGDSVSVGTSIVTIVETDTLRVEGSISEYDLKNVKEGMKAVFTFEQLGLTLTGKVKRISPVAETSGGVTVIPVEFSFDQIPPSLVIPGLTCDVEIIIKEATSSFFVPKEAVSQDQNGYYVMKQTPQGPQKVYVEVGEELNDKIEIKKGVSEGDVLLLIPSQQEIQRLRTRQGLPMFGPGGGRAR
>NZ_CP003409.1|WP_038033486.1|562199_563462_+|TolC-family-protein
MKRFFLVFLLVPVFLVGNVFDLFEENLKNSSGYWSSVEKFKEAQLNYKRYTNFWNPEISVSLGKTGITITEDGISDFSISPIVNFVNIYGFELGLSFPISVNTDDWSFNFEGTQLSVSRNLKTEYTVDKLKTEANYLSSKYSLKSTKNSIFIQTVQDIFDWYYYTKKIEILSQRLQVLNEKLSKAKDDDEKKALEKQILSTEQTLRSAEYSLQTIQTKNIDEEVYQKTRKFLEGVTLPATTLEYREDLKALELQKKAEEIEKKTWFLPYLPDLTFSFNYDFEENEWSIGIGFQMTLWDFGERKLEAEKRKSQLVSLEYQEKVRNIENSLSQELVNIANLESQLRQKEIELEDLEESSKTNDQLFRKGFLSEEDYTLSKLDYVEGTLEKENLENSLILEKLKYISILGYDLEKFLKEGDQN
>NZ_CP003409.1|WP_011943187.1|561197_562184_+|TolC-family-protein
MKNLFVVLLSLVSVLSFSVSLNDVLQTALASSTDYQIAQINLESATMDYEKAKLEATNKRSELSAELSYYNNLQSYRNSLKSAYQDVLGRIFNLLTADLSYEIAQLNFENAQEDYKTSQELFKKNLISENDLKDSELTLEEASNNLLSAQKDLEEAQKDYEEIFSVEVSEIELPLIDYQNLVSEDEYLDNLSSVKIAELNMKIAEYDLNNLSASASKYEQKKAELNYKKSKMNYDEALKEAKDSYKSTLDSLEIAFLNLKVLKEKVDLNENILKDYQERYEKGLISKKELNTQKINLLNTKKNYFNSLRSYYTSIVNFLIDAGKEVSF
>NZ_CP003409.1|WP_039446204.1|559826_561032_-|threonine-ammonia-lyase
MITLEDIKEAQRTLKNVVHRTALAYSSVLSEVTGGEIYLKMENLQKTGSFKIRGAYNKIAHLSEEERKRGVVAASAGNHAQGVALAAQIFGIPATIVMPKYAPLSKITKTRNLGAQVILEGNIFDEAYEAALRIQEKIGAVFVHPFNDPHVIAGQGTIGLEIMEDLPDVEVVVVPVGGGGLISGVSVAIKSMNPEVKVIGVQTENMPSMIASLRRGRAERVEGKPTLADGIAVKKPGDLTFELVKKYVDEMVVVNEEEIADAILFLLEQAKVVAEGAGAVGVAAVLNKLDVKGKKVAIVISGGNIDVNMIDRIINKGLVKSGRKVFIETFVMDRPGALKELLGIVAELGANVLSVFHNRSAKEVPIGFAKIELELETVDEKHVEEIERVLIAKGYEVRIVV
>NZ_CP003409.1|WP_128080910.1|558549_559719_-|iron-containing-alcohol-dehydrogenase
MRTKTTCYFGAGALAKIEDILDFLKERGIKSVVVVSDKVAYKVTGAWDKVKPALEKRGIEYVVYDDVTPNPTTEQINEATKKALEINAQAVIGIGGGSPIDTAKSVAILLEYPEKTAEELYEQKFIPEKAKPIIAINTTHGTGTEVDRFAVASILEKEYKPPIAYDCIYPTFSIDDPELTKSLPEKQSIYTSLDALNHITEAATTSLGNPFSINLARNTVELISEYLPEVLKKPDNLEARYFLMYASAIAGISFDNGMLHLTHALEHPLSAIKPDLPHGLGLAMLLPAVFKYTYKAKPQILAYVYQPIIPDLKGRPNEAEEAASKLEQWIFNLGVKEKLADVGFSEKDIPKLVRLAFETPALDLLLNLAPMKVDENLVEAIYKESLKPY
>NZ_CP003409.1|WP_004083158.1|558261_558468_-|hypothetical-protein
MRFVSDFLFFAGFGLLFIAIVFFDLGTRAIKKKQNQKKKFYDKKGWQFLSVSLGAFAVSILLALIGRG
>NZ_CP003409.1|WP_038033490.1|557350_558259_-|diacylglycerol-kinase-family-lipid-kinase
MVFLIYNPAAGGGRAGKIWDRVEDLLKKHGIDHKVAFTERPGHAMEISKKAFKEGYRRIAAFGGDGTVNEVVNGIFLNGYDLREVVFGWIPFGSGKDWARTIGVSLEIEEAIKTLKDGKEFVQDLGVGEYEKASGEIEKRAFVNVAGLFFDGFVTYRTNLLKRKNRVSYFSRIFSSIIEYDPPTARIQIDEKVWEKRVFSMNVGICKYNGGGMNQLPHAVPDDGLLAVTVINDIGKLRILANLHRVFNGKLLEHPGVEGYQAKKVVVEFQRDEPVEFDGESFWAKKIFFSIIPGVIRVLVKK
>NZ_CP003409.1|WP_011943183.1|556266_557337_+|glycosyltransferase-family-4-protein
MKIGFLSRWGATCGVGMHAEILAREFIRMGHEVVVFAPTEESASKEVKYYKRTEAQDPEFVKREIYTEVDNVTEEGWVKEEEILKENLDLLIIETFWRVPVKPLTRLIEKLKIPVISVFHEANIFKAREVVKLPCDKIVVFDRRFYDEILEFYEIPREKVEVISYPVMKPYDVEPERPVSEDKFLFFSFGRQPVEEYCDFLNALKKLRKRFDNVHYWIIRSDGRVDYEAEWITQWQKRPTVEKLYSYLKGSNVHLLPKGNTPNVVVSSTLYQIIASETPIVIRDSRFVETIETDAYGFGPIVKYRNIHDLVHKLELLMLDREQVEDIKKEVRVFVEKYGGDKIAQEFLDLAKTITK
>NZ_CP003409.1|WP_011943191.1|567819_568422_+|LysE-family-transporter
MISIFFGSFLVGLSGAVAPGPLMMIAISQSAKGWKNSIKLISGHVVLEAFLVLLLVLGFQWVLKSPLVTKVIGLLGGSFLAFMGISQLTAIKGEISQVEKNDLKIPLPITGALVSLSNPYFLLWWMSVGSAFLVKAQTSFLAGVTAFYFGHILSDILWYSLIGVFGNTILKSSRIYKIVMAVTGLFLIGFGLFFVLDSFR
>NZ_CP003409.1|WP_012896285.1|568844_570323_-|bifunctional-shikimate-kinase-AroK/3-dehydroquinate-synthase-AroB
MRIFLVGMMGSGKSTIGKRVSEVLDLQFIDMDEEIERREGRSVRRIFEEDGEEYFRLKEKELLRELVERDNVVVATGGGVVIDPENRELLKKEKTLFLYAPPEVLMERVTTENRPLLREGKERIREIWEKRKQFYAEFRRIDTSKLNEWETTALVVLEALDEKEISTIEKPHLVKIILGGFKRVRNEELVFTTERVEKIYGRYLPENRLLFPDGEEVKTLEHVSRAYYELVRMDFPRGKTIAGVGGGALTDFTGFVASTFKRGVGLSFYPTTLLAQVDASVGGKNAIDFAGVKNVVGTFRMPDYVIIDPTVTLSMDEGRFEEGVVEAFKMTILSGRGVELFDEPEKIEKRNLRVLSEMVKISVEDKARIVMEDPYDMGLRHALNLGHTLGHVYEMLEGVPHGIAVAWGIEKETMYLYRKGIVPKETMRWIVEKVKQIVPIPVPSVDVEKARNLILNDKKILKGSRVRLPYVKEIGKIEFLEVDPLELLEVVD
>NZ_CP003409.1|WP_011943194.1|570270_571401_-|chorismate-synthase
MRLTIAGDSHGKYMIAVLEGIPAGLKIDEEIIRRELFRRRNCYGRGKRMSMEEDAFEIVSGVWGGITTGAPVTILVPNKAGNPVKDVRSVPRPGHIDYAAFVKYKLPDLNVYVERSSARWTVALTAAGALLKSLLREFNIDVLGFVTRLGNVEAKNIPDNFEELRRKRDESAVFCPDPEATEGMISEIDRAKEEGNTLGGKVKVIARGVPAGIGSYSDLFKKLDSKIGSLFFAIPAVKGVVIGSEEMWYGFDYLDEFELEDGRIKRRTNNLGGIEGGITNGEDVWVNVFVKPIPTTGKPLNSVDLRTMEPAKTPYVRSDVTAVPPASVVCEAALAVVISDALLEHLGDGNIDDLKRRFGNENLPRWDDGFWKEYDR
>NZ_CP003409.1|WP_011943195.1|571397_572159_-|shikimate-dehydrogenase
MKFCIIGYPVSHSISPRLYNEYFKRAGMNHSYGMEEIPPESFDTEIRRILEEYDGFNATIPHKERVMRYVEPSEDAQRIKAVNCVFRGKGYNTDWVGVVKSLEGVEVKEPVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKIFSLDQLDEVVKKAKSLFNTTSVGMKGEKLTVSEASLKGLYLVYDVVYFETPLVSDAKRLGVEHVVKGNLMFYYQAMENLKIWGIYDERSFKEVFEEVLR
>NZ_CP003409.1|WP_011943196.1|572155_573421_-|3-phosphoshikimate-1-carboxyvinyltransferase
MKVLPAKKVEGVLSVPPDKSITHRALILSALAETESTLYNLLRCLDTERTHDILEKLGTRFEGDWEKMKVFPKPFAEPIEPLFCGNSGTTTRLMSGVLASYEMFTVLYGDSSLSRRPMRRVIEPLEMMGARFMARQNNYLPMAIKGNHLSGISYKTPVASAQVKSAVLLAGLRASGRTIVIEPAKSRDHTERMLKNLGVPVEVEGTRVVLEPATFRGFTMKVPGDISSAAFFVVLGAIHPNARITVTDVGLNPTRTGLLEVMKLMGANLEWEITEENLEPIGTVRVETSPNLKGVVVPEHLVPLMIDELPLVALLGVFAEGETVVRNAEELRKKESDRIRVLVENFKRLGVEIEEFKDGFKIVGKQSIKGGSVDPEGDHRMAMLFSIAGLVSEEGVDVKDHECVAVSFPNFYELLERVVIS
>NZ_CP003409.1|WP_038033481.1|573417_574179_-|prephenate-dehydrogenase
MKISVHGAGCIGGSIALKLKEKHHVTAFDRDEETMKALEENGIETVSKESDLYDTDLLVLALPMSVEERFLKETDFSGKILDVASVKTPFMEIARERGLNFTGGHPMAGNERKGKSGWDREMFDGKIFFLCSLDGKEDGMIENIVKDLGARPLWIDYRIHDEIVAAVSHVQYLISLSARYVGKPFEEYAGPGYLSNTRLSKQNMEMALDMIRYNKENILKYLEDARNFLNVLYHLTEKEDFENLKKVIREVIS
>NZ_CP003409.1|WP_004083125.1|574175_575192_-|3-deoxy-7-phosphoheptulonate-synthase
MIVVLKPGSTEEDIRKVVKLAESYNLKCHISKGQERTVIGIIGDDRYVVADKFESLDCVESVVRVLKPYKLVSREFHPEDTVIDLGDVKIGNGYFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSHSGGRRDLVIPLSRAAIAVGAHGIIVEVHPEPEKALSDGKQSLDFELFKELVQEMKKLADALGVKVN
>NZ_CP003409.1|WP_011943197.1|575448_576690_-|MFS-transporter
MNELLHWKRNFFLLALGRFVSILGSSIQAVAIPLFVLDLTHSGSAVALMTVAYMVPRILFTPIAGIVGDRGDRKFLMVSMDFLRGFLICFLALLAFRNSVTLPVLYVSQIAMAVMDNLFDIPTGAMFPDIVPQDFLMRANSIMGMVRIFPQILGPALGGVIYGFYGIAIVFLVNGVSFVLSAISEIFIVYSRKVEKKPAKFSQILEDLKEGFLFIWNHELIRTILIFALFLNLLISPLFMVVYPYTIREVMKFSAQEFGFLETSFTLGALLGNFLIASYLSKKNMWKAMKISIFLFELPIVFLGFLVMPDFSLNRLVLFSLFFITFLIMGFLNPIINVPLDTAFQKMTPSHIRARAFSFLILVANGVTPLGSVLYGYLVDRVPVHFLYYIVGALSFLVAVLLLVALRGKELPT
>NZ_CP003409.1|WP_164819368.1|576702_576879_-|hypothetical-protein
MKVYLMVSTILVVMLFSLIWLYVLFFSTVETAPSSPAVWELGVTETSSAMVPGSLQDR
>NZ_CP003409.1|WP_011943198.1|576885_577386_-|hypothetical-protein
MSEEIRKILEAVARGEISPEEGEMLIKAVQEKEREEIGPKGDFSEREGDYILGENEIVEEDLVLSKKKAIIRGKIKGDLALINCETFFSGEVEGDLAVIGGKIEFDGGTVKGDLALIGVKESGKTPVVEGDIARISNFFVSGILKMVSPFISNISVSSKKKVEGKE

Crispr_ID: NZ_CP003409_4

• CRISPR_ID: NZ_CP003409_4
• CRISPR_location: 925401-926563
• CRISPR_type: Orphan
• Repeat_type: III-A
• Spacer_info: 17 spacers

Consensus repeat of NZ_CP003409_4

Consensus_repeat	Method
GTTTCCATACCTCTAAGGAATTATTGAAAC	CRISPRCasFinder
GTTTCCATACCTCTAAGGAATTATTGAAAC	CRT
GTTTCAATAATTCCTTAGAGGTATGGAAA	PILER-CR

spacers of NZ_CP003409_4

>4.1|925431|37|NZ_CP003409|CRISPRCasFinder,CRT
AGCTTGAGGAGATTTACTCATCACCTGGATATGTTTA
>4.2|925498|36|NZ_CP003409|CRISPRCasFinder,CRT
AAACGGACGAACGGTGTCGGCCAAAGTAAGGAGGAT
>4.3|925564|37|NZ_CP003409|CRISPRCasFinder,CRT
ATAGGCTGGACAGGTGCATAGGCCTCTTCGAGTTCGA
>4.4|925631|37|NZ_CP003409|CRISPRCasFinder,CRT
CTGTCGAATCTTATTTTTGCTTTTCCTTGCAATACAT
>4.5|925698|36|NZ_CP003409|CRISPRCasFinder,CRT
TTACTCAAAGAGACATGCGCGAAATTATCCAAGGGT
>4.6|925764|37|NZ_CP003409|CRISPRCasFinder,CRT
GCTATTATGGTAGTAATTATAGATCTGTGTATCAGAT
>4.7|925831|42|NZ_CP003409|CRISPRCasFinder,CRT
TGTTCGTGAAACCCGAGTGGCTCATGGGTTGGCTACTCAACT
>4.8|925903|35|NZ_CP003409|CRISPRCasFinder,CRT
TTGGAGAGAGCAAGAGGCAAATACTACTACATGGT
>4.9|925968|36|NZ_CP003409|CRISPRCasFinder,CRT
AAGCAATTCCTGGAAGAGGGGGGAGATGATGCTTAA
>4.10|926034|35|NZ_CP003409|CRISPRCasFinder,CRT
GGCGCTAATGTCTTGACAAAGTTTGTCTCCAAAGG
>4.11|926099|36|NZ_CP003409|CRISPRCasFinder,CRT
TCGAGTTTCGTAGTATATTCCAAAAATTCTTCGCCG
>4.12|926165|36|NZ_CP003409|CRISPRCasFinder,CRT
AGTAACCTACAAATTGAAGTAGAAGGAGGTGTTGCA
>4.13|926231|38|NZ_CP003409|CRISPRCasFinder,CRT
ACGTTTCTTACACCTCTTCTCGAAGGTTCAGTCTTTCT
>4.14|926299|36|NZ_CP003409|CRISPRCasFinder,CRT
TACGTTAACATAAAATCCCCCCCTTCGATTATAAAT
>4.15|926365|36|NZ_CP003409|CRISPRCasFinder,CRT
TAAAGAAATGGTTGGAAGGCGGTGACGAGTATGAAG
>4.16|926431|37|NZ_CP003409|CRISPRCasFinder,CRT
TCTTGTGAACAACCTCGTTTCCGGAACACAGAACAAG
>4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT
GTTTTACAAAAAAGAATATTTTTTCAAAATCAACCG
>4.18|925431|38|NZ_CP003409|PILER-CR
AGCTTGAGGAGATTTACTCATCACCTGGATATGTTTAG
>4.19|925498|37|NZ_CP003409|PILER-CR
AAACGGACGAACGGTGTCGGCCAAAGTAAGGAGGATG
>4.20|925564|38|NZ_CP003409|PILER-CR
ATAGGCTGGACAGGTGCATAGGCCTCTTCGAGTTCGAG
>4.21|925631|38|NZ_CP003409|PILER-CR
CTGTCGAATCTTATTTTTGCTTTTCCTTGCAATACATG
>4.22|925698|37|NZ_CP003409|PILER-CR
TTACTCAAAGAGACATGCGCGAAATTATCCAAGGGTG
>4.23|925764|38|NZ_CP003409|PILER-CR
GCTATTATGGTAGTAATTATAGATCTGTGTATCAGATG
>4.24|925831|43|NZ_CP003409|PILER-CR
TGTTCGTGAAACCCGAGTGGCTCATGGGTTGGCTACTCAACTG
>4.25|925903|36|NZ_CP003409|PILER-CR
TTGGAGAGAGCAAGAGGCAAATACTACTACATGGTG
>4.26|925968|37|NZ_CP003409|PILER-CR
AAGCAATTCCTGGAAGAGGGGGGAGATGATGCTTAAG
>4.27|926034|36|NZ_CP003409|PILER-CR
GGCGCTAATGTCTTGACAAAGTTTGTCTCCAAAGGG
>4.28|926099|37|NZ_CP003409|PILER-CR
TCGAGTTTCGTAGTATATTCCAAAAATTCTTCGCCGG
>4.29|926165|37|NZ_CP003409|PILER-CR
AGTAACCTACAAATTGAAGTAGAAGGAGGTGTTGCAG
>4.30|926231|39|NZ_CP003409|PILER-CR
ACGTTTCTTACACCTCTTCTCGAAGGTTCAGTCTTTCTG
>4.31|926299|37|NZ_CP003409|PILER-CR
TACGTTAACATAAAATCCCCCCCTTCGATTATAAATG
>4.32|926365|37|NZ_CP003409|PILER-CR
TAAAGAAATGGTTGGAAGGCGGTGACGAGTATGAAGG
>4.33|926431|38|NZ_CP003409|PILER-CR
TCTTGTGAACAACCTCGTTTCCGGAACACAGAACAAGG
>4.34|926498|37|NZ_CP003409|PILER-CR
GTTTTACAAAAAAGAATATTTTTTCAAAATCAACCGG

CRISPR arrays and Neighbor proteins around NZ_CP003409_4

CRISPR arrays

The CRISPR arrays of NZ_CP003409_4

>merge|NZ_CP003409|4|925401-926563|CRISPRCasFinder,CRT,PILER-CR
TTTTTCGTACATTTAAGGAAGTATTGAAACAGCTTGAGGAGATTTACTCATCACCTGGATATGTTTAGTTTCCATACCTCTAAGGAATTATTGAAACAAACGGACGAACGGTGTCGGCCAAAGTAAGGAGGATGTTTCCATACCTCTAAGGAATTATTGAAACATAGGCTGGACAGGTGCATAGGCCTCTTCGAGTTCGAGTTTCCATACCTCTAAGGAATTATTGAAACCTGTCGAATCTTATTTTTGCTTTTCCTTGCAATACATGTTTCCATACCTCTAAGGAATTATTGAAACTTACTCAAAGAGACATGCGCGAAATTATCCAAGGGTGTTTCCATACCTCTAAGGAATTATTGAAACGCTATTATGGTAGTAATTATAGATCTGTGTATCAGATGTTTCCATACCTCTAAGGAATTATTGAAACTGTTCGTGAAACCCGAGTGGCTCATGGGTTGGCTACTCAACTGTTTCCATACCTCTAAGGAATTATTGAAACTTGGAGAGAGCAAGAGGCAAATACTACTACATGGTGTTTCCATACCTCTAAGGAATTATTGAAACAAGCAATTCCTGGAAGAGGGGGGAGATGATGCTTAAGTTTCCATACCTCTAAGGAATTATTGAAACGGCGCTAATGTCTTGACAAAGTTTGTCTCCAAAGGGTTTCCATACCTCTAAGGAATTATTGAAACTCGAGTTTCGTAGTATATTCCAAAAATTCTTCGCCGGTTTCCATACCTCTAAGGAATTATTGAAACAGTAACCTACAAATTGAAGTAGAAGGAGGTGTTGCAGTTTCCATACCTCTAAGGAATTATTGAAACACGTTTCTTACACCTCTTCTCGAAGGTTCAGTCTTTCTGTTTCCATACCTCTAAGGAATTATTGAAACTACGTTAACATAAAATCCCCCCCTTCGATTATAAATGTTTCCATACCTCTAAGGAATTATTGAAACTAAAGAAATGGTTGGAAGGCGGTGACGAGTATGAAGGTTTCCATACCTCTAAGGAATTATTGAAACTCTTGTGAACAACCTCGTTTCCGGAACACAGAACAAGGTTTCCATACCTCTAAGGAATTATTGAAACGTTTTACAAAAAAGAATATTTTTTCAAAATCAACCGGTTTCCATACCTCTAAGGAATTATTGAAAC

>NZ_CP003409|4|5|925401-926563|CRISPRCasFinder
TTTTTCGTACATTTAAGGAAGTATTGAAAC	AGCTTGAGGAGATTTACTCATCACCTGGATATGTTTA
GTTTCCATACCTCTAAGGAATTATTGAAAC	AAACGGACGAACGGTGTCGGCCAAAGTAAGGAGGAT
GTTTCCATACCTCTAAGGAATTATTGAAAC	ATAGGCTGGACAGGTGCATAGGCCTCTTCGAGTTCGA
GTTTCCATACCTCTAAGGAATTATTGAAAC	CTGTCGAATCTTATTTTTGCTTTTCCTTGCAATACAT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TTACTCAAAGAGACATGCGCGAAATTATCCAAGGGT
GTTTCCATACCTCTAAGGAATTATTGAAAC	GCTATTATGGTAGTAATTATAGATCTGTGTATCAGAT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TGTTCGTGAAACCCGAGTGGCTCATGGGTTGGCTACTCAACT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TTGGAGAGAGCAAGAGGCAAATACTACTACATGGT
GTTTCCATACCTCTAAGGAATTATTGAAAC	AAGCAATTCCTGGAAGAGGGGGGAGATGATGCTTAA
GTTTCCATACCTCTAAGGAATTATTGAAAC	GGCGCTAATGTCTTGACAAAGTTTGTCTCCAAAGG
GTTTCCATACCTCTAAGGAATTATTGAAAC	TCGAGTTTCGTAGTATATTCCAAAAATTCTTCGCCG
GTTTCCATACCTCTAAGGAATTATTGAAAC	AGTAACCTACAAATTGAAGTAGAAGGAGGTGTTGCA
GTTTCCATACCTCTAAGGAATTATTGAAAC	ACGTTTCTTACACCTCTTCTCGAAGGTTCAGTCTTTCT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TACGTTAACATAAAATCCCCCCCTTCGATTATAAAT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TAAAGAAATGGTTGGAAGGCGGTGACGAGTATGAAG
GTTTCCATACCTCTAAGGAATTATTGAAAC	TCTTGTGAACAACCTCGTTTCCGGAACACAGAACAAG
GTTTCCATACCTCTAAGGAATTATTGAAAC	GTTTTACAAAAAAGAATATTTTTTCAAAATCAACCG
GTTTCCATACCTCTAAGGAATTATTGAAAC

>NZ_CP003409|4|4|925401-926563|CRT
TTTTTCGTACATTTAAGGAAGTATTGAAAC	AGCTTGAGGAGATTTACTCATCACCTGGATATGTTTA
GTTTCCATACCTCTAAGGAATTATTGAAAC	AAACGGACGAACGGTGTCGGCCAAAGTAAGGAGGAT
GTTTCCATACCTCTAAGGAATTATTGAAAC	ATAGGCTGGACAGGTGCATAGGCCTCTTCGAGTTCGA
GTTTCCATACCTCTAAGGAATTATTGAAAC	CTGTCGAATCTTATTTTTGCTTTTCCTTGCAATACAT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TTACTCAAAGAGACATGCGCGAAATTATCCAAGGGT
GTTTCCATACCTCTAAGGAATTATTGAAAC	GCTATTATGGTAGTAATTATAGATCTGTGTATCAGAT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TGTTCGTGAAACCCGAGTGGCTCATGGGTTGGCTACTCAACT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TTGGAGAGAGCAAGAGGCAAATACTACTACATGGT
GTTTCCATACCTCTAAGGAATTATTGAAAC	AAGCAATTCCTGGAAGAGGGGGGAGATGATGCTTAA
GTTTCCATACCTCTAAGGAATTATTGAAAC	GGCGCTAATGTCTTGACAAAGTTTGTCTCCAAAGG
GTTTCCATACCTCTAAGGAATTATTGAAAC	TCGAGTTTCGTAGTATATTCCAAAAATTCTTCGCCG
GTTTCCATACCTCTAAGGAATTATTGAAAC	AGTAACCTACAAATTGAAGTAGAAGGAGGTGTTGCA
GTTTCCATACCTCTAAGGAATTATTGAAAC	ACGTTTCTTACACCTCTTCTCGAAGGTTCAGTCTTTCT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TACGTTAACATAAAATCCCCCCCTTCGATTATAAAT
GTTTCCATACCTCTAAGGAATTATTGAAAC	TAAAGAAATGGTTGGAAGGCGGTGACGAGTATGAAG
GTTTCCATACCTCTAAGGAATTATTGAAAC	TCTTGTGAACAACCTCGTTTCCGGAACACAGAACAAG
GTTTCCATACCTCTAAGGAATTATTGAAAC	GTTTTACAAAAAAGAATATTTTTTCAAAATCAACCG
GTTTCCATACCTCTAAGGAATTATTGAAAC

>NZ_CP003409|4|4|925402-926563|PILER-CR
TTTTCGTACATTTAAGGAAGTATTGAAAC	AGCTTGAGGAGATTTACTCATCACCTGGATATGTTTAG
TTTCCATACCTCTAAGGAATTATTGAAAC	AAACGGACGAACGGTGTCGGCCAAAGTAAGGAGGATG
TTTCCATACCTCTAAGGAATTATTGAAAC	ATAGGCTGGACAGGTGCATAGGCCTCTTCGAGTTCGAG
TTTCCATACCTCTAAGGAATTATTGAAAC	CTGTCGAATCTTATTTTTGCTTTTCCTTGCAATACATG
TTTCCATACCTCTAAGGAATTATTGAAAC	TTACTCAAAGAGACATGCGCGAAATTATCCAAGGGTG
TTTCCATACCTCTAAGGAATTATTGAAAC	GCTATTATGGTAGTAATTATAGATCTGTGTATCAGATG
TTTCCATACCTCTAAGGAATTATTGAAAC	TGTTCGTGAAACCCGAGTGGCTCATGGGTTGGCTACTCAACTG
TTTCCATACCTCTAAGGAATTATTGAAAC	TTGGAGAGAGCAAGAGGCAAATACTACTACATGGTG
TTTCCATACCTCTAAGGAATTATTGAAAC	AAGCAATTCCTGGAAGAGGGGGGAGATGATGCTTAAG
TTTCCATACCTCTAAGGAATTATTGAAAC	GGCGCTAATGTCTTGACAAAGTTTGTCTCCAAAGGG
TTTCCATACCTCTAAGGAATTATTGAAAC	TCGAGTTTCGTAGTATATTCCAAAAATTCTTCGCCGG
TTTCCATACCTCTAAGGAATTATTGAAAC	AGTAACCTACAAATTGAAGTAGAAGGAGGTGTTGCAG
TTTCCATACCTCTAAGGAATTATTGAAAC	ACGTTTCTTACACCTCTTCTCGAAGGTTCAGTCTTTCTG
TTTCCATACCTCTAAGGAATTATTGAAAC	TACGTTAACATAAAATCCCCCCCTTCGATTATAAATG
TTTCCATACCTCTAAGGAATTATTGAAAC	TAAAGAAATGGTTGGAAGGCGGTGACGAGTATGAAGG
TTTCCATACCTCTAAGGAATTATTGAAAC	TCTTGTGAACAACCTCGTTTCCGGAACACAGAACAAGG
TTTCCATACCTCTAAGGAATTATTGAAAC	GTTTTACAAAAAAGAATATTTTTTCAAAATCAACCGG
TTTCCATACCTCTAAGGAATTATTGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP003409.1|WP_004082449.1|917164_917653_+|NADH-dehydrogenase	unknown	unknown	gnl|CDD|224817
NZ_CP003409.1|WP_038033189.1|927198_928725_-|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase	unknown	unknown	gnl|CDD|236566
NZ_CP003409.1|WP_004082453.1|915350_916187_-|methyl-accepting-chemotaxis-protein	unknown	unknown	gnl|CDD|214599
NZ_CP003409.1|WP_004082424.1|932254_933421_+|type-III-PLP-dependent-enzyme	unknown	unknown	gnl|CDD|143482
NZ_CP003409.1|WP_011943484.1|919874_920303_+|DUF2202-domain-containing-protein	unknown	unknown	gnl|CDD|224548
NZ_CP003409.1|WP_004082422.1|933836_934112_-|hypothetical-protein	unknown	unknown	gnl|CDD|223920
NZ_CP003409.1|WP_004082421.1|934116_934932_-|septum-site-determining-protein-MinD	unknown	unknown	gnl|CDD|131023
NZ_CP003409.1|WP_010865024.1|923400_925353_+|IGHMBP2-family-helicase	unknown	unknown	gnl|CDD|273041
NZ_CP003409.1|WP_004082423.1|933422_933821_-|YjbQ-family-protein	unknown	unknown	gnl|CDD|376651
NZ_CP003409.1|WP_004082427.1|929532_930297_-|metallophosphoesterase-family-protein	unknown	unknown	gnl|CDD|378975
NZ_CP003409.1|WP_038037275.1|935021_937406_+|AAA-family-ATPase	unknown	unknown	gnl|CDD|379314
NZ_CP003409.1|WP_011943485.1|920338_921013_-|cyclase-family-protein	unknown	unknown	gnl|CDD|224790
NZ_CP003409.1|WP_004082426.1|930329_931724_-|glutamate--tRNA-ligase	unknown	unknown	gnl|CDD|234953
NZ_CP003409.1|WP_004082448.1|917655_918036_+|hypothetical-protein	unknown	unknown	gnl|CDD|225945
NZ_CP003409.1|WP_004082425.1|931820_932021_-|cold-shock-protein	unknown	unknown	gnl|CDD|224197
NZ_CP003409.1|WP_012310829.1|922366_923404_+|dipeptide-epimerase	unknown	unknown	gnl|CDD|239435
NZ_CP003409.1|WP_038033192.1|918054_919878_+|NADH-quinone-oxidoreductase-subunit-NuoF	unknown	unknown	gnl|CDD|224806
NZ_CP003409.1|WP_004082428.1|928799_929549_+|radical-SAM-protein	unknown	unknown	gnl|CDD|224769
NZ_CP003409.1|WP_038033193.1|916196_916961_-|FprA-family-A-type-flavoprotein	unknown	unknown	gnl|CDD|223503
NZ_CP003409.1|WP_038033191.1|921046_922363_+|transglutaminase-domain-containing-protein	unknown	unknown	gnl|CDD|376628

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP003409.1|WP_004082449.1|917164_917653_+|NADH-dehydrogenase	gnl|CDD|224817	COG1905, NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion].	1.62385e-76
NZ_CP003409.1|WP_038033189.1|927198_928725_-|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase	gnl|CDD|236566	PRK09558, ushA, bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed.	0
NZ_CP003409.1|WP_004082453.1|915350_916187_-|methyl-accepting-chemotaxis-protein	gnl|CDD|214599	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). Thought to undergo reversible methylation in response to attractants or repellants during bacterial chemotaxis.	3.55417e-51
NZ_CP003409.1|WP_004082424.1|932254_933421_+|type-III-PLP-dependent-enzyme	gnl|CDD|143482	cd00622, PLPDE_III_ODC, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase. This subfamily is composed mainly of eukaryotic ornithine decarboxylases (ODC, EC 4.1.1.17) and ODC-like enzymes from prokaryotes represented by Vibrio vulnificus LysineOrnithine decarboxylase. These are fold type III PLP-dependent enzymes that differ from most bacterial ODCs which are fold type I PLP-dependent enzymes. ODC participates in the formation of putrescine by catalyzing the decarboxylation of ornithine, the first step in polyamine biosynthesis. Members of this subfamily contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain, similar to bacterial alanine racemases. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Homodimer formation and the presence of the PLP cofactor are required for catalytic activity. Also members of this subfamily are proteins with homology to ODC but do not possess any catalytic activity, the Antizyme inhibitor (AZI) and ODC-paralogue (ODC-p). AZI binds to the regulatory protein Antizyme with a higher affinity than ODC and prevents ODC degradation. ODC-p is a novel ODC-like protein, present only in mammals, that is specifically exressed in the brain and testes. ODC-p may function as a tissue-specific antizyme inhibitory protein.	2.16025e-174
NZ_CP003409.1|WP_011943484.1|919874_920303_+|DUF2202-domain-containing-protein	gnl|CDD|224548	COG1633, COG1633, Uncharacterized conserved protein [Function unknown].	2.06588e-24
NZ_CP003409.1|WP_004082422.1|933836_934112_-|hypothetical-protein	gnl|CDD|223920	COG0851, MinE, Septum formation topological specificity factor [Cell division and chromosome partitioning].	0.000615691
NZ_CP003409.1|WP_004082421.1|934116_934932_-|septum-site-determining-protein-MinD	gnl|CDD|131023	TIGR01968, Septum_site-determining_protein_MinD, septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model. [Cellular processes, Cell division].	2.19095e-148
NZ_CP003409.1|WP_010865024.1|923400_925353_+|IGHMBP2-family-helicase	gnl|CDD|273041	TIGR00376, DNA-binding_protein_SMUBP-2, DNA helicase, putative. The gene product may represent a DNA helicase. Eukaryotic members of this family have been characterized as binding certain single-stranded G-rich DNA sequences (GGGGT and GGGCT). A number of related proteins are characterized as helicases. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP003409.1|WP_004082423.1|933422_933821_-|YjbQ-family-protein	gnl|CDD|376651	pfam01894, UPF0047, Uncharacterized protein family UPF0047. This family has no known function. The alignment contains a conserved aspartate and histidine that may be functionally important.	1.4098e-72
NZ_CP003409.1|WP_004082427.1|929532_930297_-|metallophosphoesterase-family-protein	gnl|CDD|378975	pfam12850, Metallophos_2, Calcineurin-like phosphoesterase superfamily domain. Members of this family are part of the Calcineurin-like phosphoesterase superfamily.	3.46972e-27
NZ_CP003409.1|WP_038037275.1|935021_937406_+|AAA-family-ATPase	gnl|CDD|379314	pfam13654, AAA_32, AAA domain. This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.	0
NZ_CP003409.1|WP_011943485.1|920338_921013_-|cyclase-family-protein	gnl|CDD|224790	COG1878, COG1878, Kynurenine formamidase [Amino acid transport and metabolism].	4.61462e-73
NZ_CP003409.1|WP_004082426.1|930329_931724_-|glutamate--tRNA-ligase	gnl|CDD|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP003409.1|WP_004082448.1|917655_918036_+|hypothetical-protein	gnl|CDD|225945	COG3411, COG3411, Ferredoxin [Energy production and conversion].	2.20196e-22
NZ_CP003409.1|WP_004082425.1|931820_932021_-|cold-shock-protein	gnl|CDD|224197	COG1278, CspC, Cold shock proteins [Transcription].	1.68316e-32
NZ_CP003409.1|WP_012310829.1|922366_923404_+|dipeptide-epimerase	gnl|CDD|239435	cd03319, L-Ala-DL-Glu_epimerase, L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.	2.84691e-127
NZ_CP003409.1|WP_038033192.1|918054_919878_+|NADH-quinone-oxidoreductase-subunit-NuoF	gnl|CDD|224806	COG1894, NuoF, NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit [Energy production and conversion].	0
NZ_CP003409.1|WP_004082428.1|928799_929549_+|radical-SAM-protein	gnl|CDD|224769	COG1856, COG1856, Uncharacterized homolog of biotin synthetase [Function unknown].	5.19577e-130
NZ_CP003409.1|WP_038033193.1|916196_916961_-|FprA-family-A-type-flavoprotein	gnl|CDD|223503	COG0426, FpaA, Uncharacterized flavoproteins [Energy production and conversion].	8.26081e-79
NZ_CP003409.1|WP_038033191.1|921046_922363_+|transglutaminase-domain-containing-protein	gnl|CDD|376628	pfam01841, Transglut_core, Transglutaminase-like superfamily. This family includes animal transglutaminases and other bacterial proteins of unknown function. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterized transglutaminase, the human blood clotting factor XIIIa'. On the basis of the experimentally demonstrated activity of the Methanobacterium phage pseudomurein endoisopeptidase, it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease.	1.40142e-23

Protein sequences

>NZ_CP003409.1|WP_010865024.1|923400_925353_+|IGHMBP2-family-helicase
MTVQQFIKKLVRLVELERNAEINAMLDEMKRLSGEEREKKGRAVLGLTGKFIGEELGYFLVRFGRRKKIDTEIGVGDLVLISKGNPLKSDYTGTVVEKGERFITVAVDRLPSWKLKNVRIDLFASDITFRRQIENLMTLSSEGKKALEFLLGKRKPEESFEEEFTPFDEGLNESQREAVSLALGSSDFFLIHGPFGTGKTRTLVEYIRQEVARGKKILVTAESNLAVDNLVERLWGKVSLVRIGHPSRVSSHLKESTLAHQIETSSEYEKVKKMKEELAKLIKKRDSFTKPSPQWRRGLSDKKILEYAEKNWSARGVSKEKIKEMAEWIKLNSQIQDIRDLIERKEEIIASRIVREAQVVLSTNSSAALEILSGIVFDVVVVDEASQATIPSILIPISKGKKFVLAGDHKQLPPTILSEDAKDLSRTLFEELITRYPEKSSLLDTQYRMNELLMEFPSEEFYDGKLKAAEKVRNITLFDLGVEIPNFGKFWDVVLSPKNVLVFIDTKNRSDRFERQRKDSPSRENPLEAQIVKEVVEKLLSMGVKEDWIGIITPYDDQVNLIRELIEAKVEVHSVDGFQGREKEVIIISFVRSNKNGEIGFLEDLRRLNVSLTRAKRKLIATGDSSTLSVHPTYRRFVEFVKKKGTYVIF
>NZ_CP003409.1|WP_012310829.1|922366_923404_+|dipeptide-epimerase
MSRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPSFRVNGERVEALLAIENAVREMITGIDVRNYARIFEITDRLFGFPSLKAAVQFATLDALSQELGTQVCYLLGGKRDEIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIVDANMGYTPKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVKIAESSGLKLMIGCMGESSLGINQSVHFALGTGAFEFHDLDSHLMLKEEVFRGKFIQDGPRMRVKDQ
>NZ_CP003409.1|WP_038033191.1|921046_922363_+|transglutaminase-domain-containing-protein
MEFLIYSLPEEVLREEMLGNFSVALKLIDDFLKKDLPLLQRERLIYEKERIERLLEDYPFTEKEAMEKMREMFEGFSEGEFQYLMNEGVLDYIVVEGEKRFERRFFHNLAFVRSEYRERLRKDERSEKARRILHERLERLIKGEDPKRYRIRARITLKLKETSSKHRVWLPFPKESLQIESVKLLRTSHKSYYISPNDVPQRTIYFEGEDSTFFVEFEYIVREWVNHVDPERVSEKVVGFEEFLKEEPPHIVFTPKLRWLTQTVVGSEVNPYLKAKRIYDWITLNVRYFYVKPYALYENITDFVVNNLKGDCGFQALLFITMCRIAGVPARWQSGWYINPIFGSPHDWALFYVEPYGWLPADLSFGGARRDNESFRSFYFGNLDGFRMVANDGFMKDFDPKTRFVRSDPTDNQVGEAESEEKRLPFESTIEVISFEEV
>NZ_CP003409.1|WP_011943485.1|920338_921013_-|cyclase-family-protein
MFIELSYPIEERMLTYPDNPPDYFEPKSRIEQGDAANTMMIHHFSHTGTHVDAPYHFCEEGWTLDQIPLEYFIFEKPLLVDREKKPMELFTIEDIEELDLNGVDLLMFRSGFAKLRRTDPATYRYMFPGISKELARFLRESVPSLKAVMLDFLSADPIVLGEKENYPAHRWLLSKKFSSKRPIIIFEDVNLEPVAGKKIKRVIALPLRFKGLDGGPVSVLAEVE
>NZ_CP003409.1|WP_011943484.1|919874_920303_+|DUF2202-domain-containing-protein
MIGPRDLLNIALRIESTGYSYYKNLTEKTEGETKALFERLAEQERDHSRKFKEILEKYEQDLNPSDEVLGYLEALAEISIFPKLEETPPDDLREAVRRAIEVEKDSIVFYSEILSYVPEKEPVQAIIDEEKKHLRDLLRLEV
>NZ_CP003409.1|WP_038033192.1|918054_919878_+|NADH-quinone-oxidoreductase-subunit-NuoF
MPLTTNTILICAGGACISAGEKSVKDAFEEELRKYGLDEVVRVIETGCMGACTLGPIAVIYPESVFYQKLTPDAAREIVEEHILKGRIVEKYLYKASEGKPVPRVHEEVPFFKKQVRIVTRNLGVIDPTKIEEYIARDGYFALAKALQMKPEDVIKEIKDSGLRGRGGAGFPTGLKWELAARQKAEKKFVVCNADEGDPGAFMDRSVLEGDPHAVIEGMAIAAYAIGAQKGFVYVRAEYPLAIERLNIALNQAREYGFLGGNIMGTDFSFDIEIRIGAGAFVCGEETALMASIEGERGQPKVKPPYPVEKGLWGYPTVINNVETLANVPWIIRNGAKEFRKYGTENSPGTKVFALAGKVKNTGLVEVPMGITLRELIYEIGGGIAGDKKLKAIQTGGPSGGCIPAEYVDTPVDFESLQKLGAIMGSGGMIVMDEDDCMVDVARFFLEFTVEESCGKCTPCREGTKKMLEILEKITSGEGTEKDIEELEKLAHVVKDTSLCGLGQTAPNPVLSTLRYFRDEYLAHVKEKRCPSKKCKALISYVIDPEKCVGCTACARVCPVQCISGQVRQPHVIDQAECVRCGSCIEVCRFGAISKVTPALPVEEAVE
>NZ_CP003409.1|WP_004082448.1|917655_918036_+|hypothetical-protein
MAKVKSLEELMKIKEQALKDLQLRGETGKRGKITVAMGTCGIAAGAKETLKAIVEALNEYNINDIAVVQSGCMGLCEVEPTVEVRLEGQEPVIYGRVTPENAKRIVKMHILEGRVVEDLVVKRGEA
>NZ_CP003409.1|WP_004082449.1|917164_917653_+|NADH-dehydrogenase
MVKSKEELFKELENFIEENGYEGKKDALIQVLHKAQELFGYLPADVLEYISDKLDVPLSKVYGVVTFYNFFSTKPKGKHQIKVCLGTACYVKGADRIFERFLEELKVNPDEPTSDGMFSVHGVRCLGACSMAPVVMVDEDDFYGRVTPDMVPQIISKYKREG
>NZ_CP003409.1|WP_038033193.1|916196_916961_-|FprA-family-A-type-flavoprotein
MFENEILFDNGQHKFLFLGWEEKEEEEIVQTNQYLILDGNEGILLDPGGAHVFPRVMSNVAEVVDLSSIRHIFYTHQDPDVTSGILLWLSICENAKIYISSLWVRFLPHFGIYDQKRIVPISDKGTKIKLLSGNELEILPAHFLHSTGNFVLYDPVAKILFSGDIGAAVFEKGKRYRYVDDFERHLPLMEAFHKRYMSSNTACKKWVDMVSKRKIDMIAPQHGAVFRGESVKKFLEWFRNLKCGVDLIDNLYSL
>NZ_CP003409.1|WP_004082453.1|915350_916187_-|methyl-accepting-chemotaxis-protein
MREREIVDKLTSAFFAENTIISFTSQLDEALTRKLRRMQRRIEEVKERFVNLNRLFQELVGDFQAKSDQLVSVIQDMEKISENIMEELKKSGTNVDQIVERVKEASSQIGETLENIRSIEKLIQNIMRIARETNILALNATIEAARAGEAGKGFMIVANEVQNLSNETNEVTKQIVEKAREILESSQRSLENLEFMANLFETVGKTLQNMVRFMENNVKLLQEVRNSLDTSKESLSEKSAEIDSATKVLEETAGGFTTINRVINSVITAQRKLKDLKI
>NZ_CP003409.1|WP_038033189.1|927198_928725_-|bifunctional-UDP-sugar-hydrolase/5'-nucleotidase
MRKFLVILLALLITALLLGARLTILHVNDTHGHAWAFDEYRNPGIGGLATIATIVEEVKREVESQGGYVIFLHAGDLNTGVPESDLQDAIPDIVGFNMMGLKAMAVGNHEFDNPREVLEKQMKFADFPFLSANIVKEDGEPFFKPYIVEDLGELKIAIIGFTTEETEILEPLYLEGLRFENALKVAQKIAPELKKQADVVIALAHLDWGEPKKEDITTTHQLAGVEGIDVVIAGHSHVLGSDVVEGKIIASAGEYGKYVGRLDLDIEDGKIVAWHWEAIPVNLKVYENEKYRYLGKPYLENRYVAKALEYFKKVGNEKLDTVIGETKIYLDGEREHVRSKSTNLANLIADAMRWKVGADIAFTNGGGIRASIKPGKITVRDILTVLPFGNTLYVLELTGEQIMKVLEYAATIPEGKGAFLQVSGLTWKIKDGKVVEVLVNGEPLDPEKKYKVVTNNYMAGGGDGYVMFKEWDGYDTGYLMSDAVIEYIQNVLNGKIEEYDDSQRYVRE
>NZ_CP003409.1|WP_004082428.1|928799_929549_+|radical-SAM-protein
MTVDPSHTIPVSVTGAFCSLNCPHCGAHYLRHMISVDEIPALVKKGYRSFLISGGMLPDGSIPFEKYYEHLKELKESHGLLYNFHVGFQKSKVAKELADVVSMDFFGDETVLKSIYGLALTPQEILDIAHFYENVVFHITVGITGGKITHEEKALEILSQETDTVVLNVFIPTPGTKFGKSFPPDLQEVVKLFEKARKLFKRVILGCMQPRGEYRKKLQSELKDLVDVITKPVGGTGEFKGCCAFIGRG
>NZ_CP003409.1|WP_004082427.1|929532_930297_-|metallophosphoesterase-family-protein
MRLAFFGDVHGNFEALKAVLEDMENKGVDEVFCLGDLVGYGPDPEAVVQTIMEKNIKTIMGNYDDAVGYSKESCGCSYAPGRETEVGDISLKWSIENTSEKTREFLRNLPKKLSFEVEGVRFLLVHGSPLNELLEYVKPNTPPDRLKKIVESVEENVVVNGHTHLPMVKWVMGKLVLNPGSAGRPKDGDPRASYMIVDVENGTVSFEIVRVRYDVKTTVEKIARNGLPVELATVLALGQTFDMGPGKVTFTLGR
>NZ_CP003409.1|WP_004082426.1|930329_931724_-|glutamate--tRNA-ligase
MVRVRFAPSPTGHLHVGGARTALFNWMFARKEGGKFILRIEDTDTERSSREYEQQILESLRWCGLDWDEGPDIGGDFGPYRQSERLEIYREYAEKLVEDKRAYYVVYDKEDPSKELFTTYEYPHEYKEKGHPVTIKFKVLPGKTSFEDLLKGYMEFDNSTLEDFIIMKSNGFPTYNFAVVVDDHLMRISHVFRGEDHLSNTPKQLMIYEAFGWEAPVFMHIPLILGSDRTPLSKRHGATSVEHFRREGILSRALMNYLALLGWRVEGDEIFTIEEKLQSFDPKDISNKGVIFDYQKLEWVNGKHMRRIDLEDLKREFIEWAKYAGKEIPSVDERYFSETLRICREKVNTLSQLYDIMYPFMNDDYEYEKDYVEKFLKREEAERVLEEAKKAFKDLNSWNMEEIEKTLRDLSEKGLASKKVVFQLIRGAVTGKLVTPGLFETIEVLGKERTLKRLERTLQFLKKT
>NZ_CP003409.1|WP_004082425.1|931820_932021_-|cold-shock-protein
MRGTVKWFDSKKGYGFITMENGEDIFVHWSAIQMDGFKTLRENETVEFEVQKGTKGPQAVNVRPVR
>NZ_CP003409.1|WP_004082424.1|932254_933421_+|type-III-PLP-dependent-enzyme
MMEYWIRRALEVVKTPFLLFDLSVVEKKYLEMKAALKKADIYYAVKANSHPRIISLLARLGSNFDVASKGEIEKLLALGVDGKRMSFGNTIKREEDIAFAYKNGIRLFAVDSEMEVEKVAINAPGSFVFVRVETDGADADWPLSRKFGTNPEHALQLLSYASKMKLIPAGLSFHVGSQNLNPESWKKAIEIAGRVFKKAMRSGLNLFLLNVGGGFPVQHTKPIPSMEEIGKAIEEAIDENLWFVHNLKVIAEPGRYMVGEAGWLVTKVLLKSERSGEKWVYIDAGVFHGLAETIQNFEYEIRVLGKEREELEEYHLAGPTCDSVDVIYDRIFLPKSITLNDLVCFINAGAYTVEYNTRFNGIEPPKMVFIEELTEISIEEKIKTRVLD
>NZ_CP003409.1|WP_004082423.1|933422_933821_-|YjbQ-family-protein
MLKRLTVRTSSRTQFVDITSEIVKFIEESKVRNGICVVFVPHTTAGITINENADPSVRQDIMNTLNKLVPPSAGYTHLEGNADSHIKASLVGSSVTLIIENGRPLLGTWQGIYFCEFDGPRTRSVYVKIVEG
>NZ_CP003409.1|WP_004082422.1|933836_934112_-|hypothetical-protein
MKFLFWEFGKKNKSRETAKKRLEQIVGTTKRRQMNITEIIPKEILDKNSDKIKERIASWLSETFNVEKEKIKIDLEEREGHVVIITNVFFK
>NZ_CP003409.1|WP_004082421.1|934116_934932_-|septum-site-determining-protein-MinD
MGNVIVVTSGKGGVGKTTITANLGCALAKLGEKVCLIDADIGLKNLDIVLGLENRIVYTMIDVVNGKVSPQEALVKHKMLKNLYLLPASQIATKEMISPNDMKAIVKELIPHFDYIIIDSPAGIERGFRNAVAPAERVLVVTTPELPAISDADRVIGLLENFGFSDEKINVIINRFKPHMVKKGEMLTTDDIKHTLSLEIIAVIPDSEDIIVASNTGIPVSLNGNSRISKNFENLARRIRGEGVPLENDFVTVSKGLIDTLKDFFSKLKRG
>NZ_CP003409.1|WP_038037275.1|935021_937406_+|AAA-family-ATPase
MIRKLRPDEINNFDLDFLNFQTTEEVPPNEGFIGQKRAKEAIETGIRIKEKGYNIFVTGVTGTGRRTFVQMMLQDVAKKLPAPNDWGYVYNFENPYEPKAISFKAGQGRRFKKRLEDLINEVVEALNKSFESEEFARKISEMEEKYALMRKQLWESLEAKASELGFVVQLTPAGVVMLPVVDGKPLPPEAVNALPDQAKREIEERQMKLKHLVDGTLYRIRKLDIEFRKSLEEFHKRTALFAIDPLFVEVESEFENEGVKEFLESVKKDIVENLLDFLRMDARERKEIYMRKYSLNLIVDNSDLTGAPVIYETNPTYSNLFGKIEYYVRGGFLHTDFSMIRPGSVHKANGGFLIVEAERLLSQPYAWYNLKRVLMESQISVENLEHTLGVSSTITLKPEKIPLDLKVVIIGTPYLYELLYELDPDFRKLFRIKAEFDWEIPRNELNVQKYVSFISSVCREKNLPHFDRGAVKRVIWYAMRNAGNSTKLSAVFGDIVNLIVESGELARLEGAEVTTSDHVLKSYQAMENRRNLLEEKYDEMIKTFDLMIEVTGSKVGQINGLTVLDLGDHSFGVPVKITAKVYLGRPGVVDIQREADLSGKIHSKAVLILEGFLGSRYAQDFPLSVSASISFEQVYSEVEGDSASLAEALALLSAISKVPIKQGIAVTGSINQHGEVQPVGGIVEKVEGFYRACKTRGFDGEQGVIIPKANAKNLVLKDEIIQAMKKGLFHIWTVETIDDAIEIVMGMKAGRVTKTGKFERNSVNYLVYRELKKMKKLLDGVPEERKKKKRKGKK

Crispr_ID: NZ_CP003409_5

• CRISPR_ID: NZ_CP003409_5
• CRISPR_location: 1030235-1032501
• CRISPR_type: TypeIII
• Repeat_type: NA
• Spacer_info: 34 spacers
• Cas_protein_info: cas2,cas1,cas4,cas3,cas5,cas7,csx22,csa3

Consensus repeat of NZ_CP003409_5

Consensus_repeat	Method
GTTTTTATCTTCCTAAGAGGAATATGAAC	PILER-CR
GTTTTTATCTTCCTAAGAGGAATATGAAC	CRISPRCasFinder
GTTTTTATCTTCCTAAGAGGAATATGAAC	CRT

spacers of NZ_CP003409_5

>5.1|1030264|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GCTTACTTCTTTGCATAAGTAGTTCTGGGAACTCCA
>5.2|1030329|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GATCGATGCCGATTTGCACTTTGTGTTCTGTTTTTTT
>5.3|1030395|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GACGGCACTGTGTTTCTGCACGGGAGGGCTGTAGTC
>5.4|1030460|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GCAGAAAAAGTTCGAACATCTTTCTGACCACAACTGC
>5.5|1030526|38|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
AGAATTTCAGCTATTTTGTACTGTGAAAGACCCATTTT
>5.6|1030593|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GATCCTTGTTGAATGGAAATTACTTGACTGGTTAAG
>5.7|1030658|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GATATACCCAGTGAAGGCATACGTTTCTCGATACGAA
>5.8|1030724|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
ATGACGAATGCCAGGATTGAGAGGACAGCGATGCTGA
>5.9|1030790|35|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GCAGATCACAGGTATAAGCGATGTGGACATACTGA
>5.10|1030854|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
ACTATATGTGGTATTCTATTTTTAAAGAACACAATA
>5.11|1030919|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GCTCCTAAAGCAAAGAGATCGTAGTACCATGTGTAGG
>5.12|1030985|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TAGAAAAATATGTACCAGAGGAGAAACTCAAAAGAA
>5.13|1031050|38|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GCTGGAACATACGAAACGATCTCCCTTTCGGACTACGC
>5.14|1031117|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
ACACCTTTGAAATTCGAATGTCAGATCGTTTCAATC
>5.15|1031182|39|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GACATAGACACAACACGAAGTTTCATAGGAAGGGTACTG
>5.16|1031250|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
AATGGAAACACCTGTAGCTTGAGAGTGAGAGTCTTTC
>5.17|1031316|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CCTTCATCTCCCTCCTTTTGCTTCTCCTCTCTGTAT
>5.18|1031381|35|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
AAAATGGCCTCTCTTGCTTGCTCTTTTTCTTCCTC
>5.19|1031445|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TATGTCGGCGTTTTCGAAAAGATCGTAGTCACCCCTG
>5.20|1031511|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TTTCTGTGTAAGCTTCTTGATCTCCTGTTCGATATTA
>5.21|1031577|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TCCACAGAGCAAAAGCGAATCTGAATGAGAAAGGAAG
>5.22|1031643|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TTTCGTCGTAGACAACTATCTCTCTTTTTACTGTCA
>5.23|1031708|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CTTTTCATAGACGATGTGGACACTGAAGGGAAAAGA
>5.24|1031773|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GTGATCTGCTGGGTGATGTACTTTCCGATCGAAAAGG
>5.25|1031839|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TATAATTCGAGAGTTAATTCTGTAGATGTTATGCTCA
>5.26|1031905|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CCGGGCAATTGTAATGGAGGTTGCAGAGGACGGTGCA
>5.27|1031971|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CATCAACACATACACCGATCTCTATTTGTATGTCGAA
>5.28|1032037|39|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TATGGCGCCGTCAACGCCGAATAGCGGTTATCAATCCAA
>5.29|1032105|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
ATTGGCTATATTCGCAAATCGCCTATATCCCTTGGCC
>5.30|1032171|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TGTGGAGACCGTTAGCAAGCCTGCGATTGACAACTAC
>5.31|1032237|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GCGAGTTGAAATTTCCCTACAAAGAATGGAAGGGAGC
>5.32|1032303|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
ATCAAAACAAGCAGTAACCGAAACCGCACAGCCTACT
>5.33|1032369|38|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TCGGAAAGCCCCAATTTGATATGAGTAGTAATAGCCTC
>5.34|1032436|37|NZ_CP003409|CRT
GGCGTGATGTGATAGATGGAAAGGTGAACCACTGCTA

CRISPR arrays and Neighbor proteins around NZ_CP003409_5

CRISPR arrays

The CRISPR arrays of NZ_CP003409_5

>merge|NZ_CP003409|5|1030235-1032501|PILER-CR,CRISPRCasFinder,CRT
GTTTTTATCTTCCTAAGAGGAATATGAACGCTTACTTCTTTGCATAAGTAGTTCTGGGAACTCCAGTTTTTATCTTCCTAAGAGGAATATGAACGATCGATGCCGATTTGCACTTTGTGTTCTGTTTTTTTGTTTTTATCTTCCTAAGAGGAATATGAACGACGGCACTGTGTTTCTGCACGGGAGGGCTGTAGTCGTTTTTATCTTCCTAAGAGGAATATGAACGCAGAAAAAGTTCGAACATCTTTCTGACCACAACTGCGTTTTTATCTTCCTAAGAGGAATATGAACAGAATTTCAGCTATTTTGTACTGTGAAAGACCCATTTTGTTTTTATCTTCCTAAGAGGAATATGAACGATCCTTGTTGAATGGAAATTACTTGACTGGTTAAGGTTTTTATCTTCCTAAGAGGAATATGAACGATATACCCAGTGAAGGCATACGTTTCTCGATACGAAGTTTTTATCTTCCTAAGAGGAATATGAACATGACGAATGCCAGGATTGAGAGGACAGCGATGCTGAGTTTTTATCTTCCTAAGAGGAATATGAACGCAGATCACAGGTATAAGCGATGTGGACATACTGAGTTTTTATCTTCCTAAGAGGAATATGAACACTATATGTGGTATTCTATTTTTAAAGAACACAATAGTTTTTATCTTCCTAAGAGGAATATGAACGCTCCTAAAGCAAAGAGATCGTAGTACCATGTGTAGGGTTTTTATCTTCCTAAGAGGAATATGAACTAGAAAAATATGTACCAGAGGAGAAACTCAAAAGAAGTTTTTATCTTCCTAAGAGGAATATGAACGCTGGAACATACGAAACGATCTCCCTTTCGGACTACGCGTTTTTATCTTCCTAAGAGGAATATGAACACACCTTTGAAATTCGAATGTCAGATCGTTTCAATCGTTTTTATCTTCCTAAGAGGAATATGAACGACATAGACACAACACGAAGTTTCATAGGAAGGGTACTGGTTTTTATCTTCCTAAGAGGAATATGAACAATGGAAACACCTGTAGCTTGAGAGTGAGAGTCTTTCGTTTTTATCTTCCTAAGAGGAATATGAACCCTTCATCTCCCTCCTTTTGCTTCTCCTCTCTGTATGTTTTTATCTTCCTAAGAGGAATATGAACAAAATGGCCTCTCTTGCTTGCTCTTTTTCTTCCTCGTTTTTATCTTCCTAAGAGGAATATGAACTATGTCGGCGTTTTCGAAAAGATCGTAGTCACCCCTGGTTTTTATCTTCCTAAGAGGAATATGAACTTTCTGTGTAAGCTTCTTGATCTCCTGTTCGATATTAGTTTTTATCTTCCTAAGAGGAATATGAACTCCACAGAGCAAAAGCGAATCTGAATGAGAAAGGAAGGTTTTTATCTTCCTAAGAGGAATATGAACTTTCGTCGTAGACAACTATCTCTCTTTTTACTGTCAGTTTTTATCTTCCTAAGAGGAATATGAACCTTTTCATAGACGATGTGGACACTGAAGGGAAAAGAGTTTTTATCTTCCTAAGAGGAATATGAACGTGATCTGCTGGGTGATGTACTTTCCGATCGAAAAGGGTTTTTATCTTCCTAAGAGGAATATGAACTATAATTCGAGAGTTAATTCTGTAGATGTTATGCTCAGTTTTTATCTTCCTAAGAGGAATATGAACCCGGGCAATTGTAATGGAGGTTGCAGAGGACGGTGCAGTTTTTATCTTCCTAAGAGGAATATGAACCATCAACACATACACCGATCTCTATTTGTATGTCGAAGTTTTTATCTTCCTAAGAGGAATATGAACTATGGCGCCGTCAACGCCGAATAGCGGTTATCAATCCAAGTTTTTATCTTCCTAAGAGGAATATGAACATTGGCTATATTCGCAAATCGCCTATATCCCTTGGCCGTTTTTATCTTCCTAAGAGGAATATGAACTGTGGAGACCGTTAGCAAGCCTGCGATTGACAACTACGTTTTTATCTTCCTAAGAGGAATATGAACGCGAGTTGAAATTTCCCTACAAAGAATGGAAGGGAGCGTTTTTATCTTCCTAAGAGGAATATGAACATCAAAACAAGCAGTAACCGAAACCGCACAGCCTACTAGTTTTATCTTCCTAAGAGGAATATGAACTCGGAAAGCCCCAATTTGATATGAGTAGTAATAGCCTCGTTTTTATCTTCCTAAGAGGAATATGAATGGCGTGATGTGATAGATGGAAAGGTGAACCACTGCTATTTTTTATCCTCCTAATGAGAAATCATAA

>NZ_CP003409|5|5|1030235-1032435|PILER-CR
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTTACTTCTTTGCATAAGTAGTTCTGGGAACTCCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATCGATGCCGATTTGCACTTTGTGTTCTGTTTTTTT
GTTTTTATCTTCCTAAGAGGAATATGAAC	GACGGCACTGTGTTTCTGCACGGGAGGGCTGTAGTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCAGAAAAAGTTCGAACATCTTTCTGACCACAACTGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	AGAATTTCAGCTATTTTGTACTGTGAAAGACCCATTTT
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATCCTTGTTGAATGGAAATTACTTGACTGGTTAAG
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATATACCCAGTGAAGGCATACGTTTCTCGATACGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATGACGAATGCCAGGATTGAGAGGACAGCGATGCTGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCAGATCACAGGTATAAGCGATGTGGACATACTGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ACTATATGTGGTATTCTATTTTTAAAGAACACAATA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTCCTAAAGCAAAGAGATCGTAGTACCATGTGTAGG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TAGAAAAATATGTACCAGAGGAGAAACTCAAAAGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTGGAACATACGAAACGATCTCCCTTTCGGACTACGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	ACACCTTTGAAATTCGAATGTCAGATCGTTTCAATC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GACATAGACACAACACGAAGTTTCATAGGAAGGGTACTG
GTTTTTATCTTCCTAAGAGGAATATGAAC	AATGGAAACACCTGTAGCTTGAGAGTGAGAGTCTTTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	CCTTCATCTCCCTCCTTTTGCTTCTCCTCTCTGTAT
GTTTTTATCTTCCTAAGAGGAATATGAAC	AAAATGGCCTCTCTTGCTTGCTCTTTTTCTTCCTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATGTCGGCGTTTTCGAAAAGATCGTAGTCACCCCTG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TTTCTGTGTAAGCTTCTTGATCTCCTGTTCGATATTA
GTTTTTATCTTCCTAAGAGGAATATGAAC	TCCACAGAGCAAAAGCGAATCTGAATGAGAAAGGAAG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TTTCGTCGTAGACAACTATCTCTCTTTTTACTGTCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CTTTTCATAGACGATGTGGACACTGAAGGGAAAAGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GTGATCTGCTGGGTGATGTACTTTCCGATCGAAAAGG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATAATTCGAGAGTTAATTCTGTAGATGTTATGCTCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CCGGGCAATTGTAATGGAGGTTGCAGAGGACGGTGCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CATCAACACATACACCGATCTCTATTTGTATGTCGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATGGCGCCGTCAACGCCGAATAGCGGTTATCAATCCAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATTGGCTATATTCGCAAATCGCCTATATCCCTTGGCC
GTTTTTATCTTCCTAAGAGGAATATGAAC	TGTGGAGACCGTTAGCAAGCCTGCGATTGACAACTAC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCGAGTTGAAATTTCCCTACAAAGAATGGAAGGGAGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATCAAAACAAGCAGTAACCGAAACCGCACAGCCTACT
AGTTTTATCTTCCTAAGAGGAATATGAAC	TCGGAAAGCCCCAATTTGATATGAGTAGTAATAGCCTC
GTTTTTATCTTCCTAAGAGGAATATGAAT

>NZ_CP003409|5|6|1030235-1032435|CRISPRCasFinder
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTTACTTCTTTGCATAAGTAGTTCTGGGAACTCCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATCGATGCCGATTTGCACTTTGTGTTCTGTTTTTTT
GTTTTTATCTTCCTAAGAGGAATATGAAC	GACGGCACTGTGTTTCTGCACGGGAGGGCTGTAGTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCAGAAAAAGTTCGAACATCTTTCTGACCACAACTGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	AGAATTTCAGCTATTTTGTACTGTGAAAGACCCATTTT
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATCCTTGTTGAATGGAAATTACTTGACTGGTTAAG
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATATACCCAGTGAAGGCATACGTTTCTCGATACGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATGACGAATGCCAGGATTGAGAGGACAGCGATGCTGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCAGATCACAGGTATAAGCGATGTGGACATACTGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ACTATATGTGGTATTCTATTTTTAAAGAACACAATA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTCCTAAAGCAAAGAGATCGTAGTACCATGTGTAGG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TAGAAAAATATGTACCAGAGGAGAAACTCAAAAGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTGGAACATACGAAACGATCTCCCTTTCGGACTACGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	ACACCTTTGAAATTCGAATGTCAGATCGTTTCAATC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GACATAGACACAACACGAAGTTTCATAGGAAGGGTACTG
GTTTTTATCTTCCTAAGAGGAATATGAAC	AATGGAAACACCTGTAGCTTGAGAGTGAGAGTCTTTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	CCTTCATCTCCCTCCTTTTGCTTCTCCTCTCTGTAT
GTTTTTATCTTCCTAAGAGGAATATGAAC	AAAATGGCCTCTCTTGCTTGCTCTTTTTCTTCCTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATGTCGGCGTTTTCGAAAAGATCGTAGTCACCCCTG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TTTCTGTGTAAGCTTCTTGATCTCCTGTTCGATATTA
GTTTTTATCTTCCTAAGAGGAATATGAAC	TCCACAGAGCAAAAGCGAATCTGAATGAGAAAGGAAG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TTTCGTCGTAGACAACTATCTCTCTTTTTACTGTCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CTTTTCATAGACGATGTGGACACTGAAGGGAAAAGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GTGATCTGCTGGGTGATGTACTTTCCGATCGAAAAGG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATAATTCGAGAGTTAATTCTGTAGATGTTATGCTCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CCGGGCAATTGTAATGGAGGTTGCAGAGGACGGTGCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CATCAACACATACACCGATCTCTATTTGTATGTCGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATGGCGCCGTCAACGCCGAATAGCGGTTATCAATCCAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATTGGCTATATTCGCAAATCGCCTATATCCCTTGGCC
GTTTTTATCTTCCTAAGAGGAATATGAAC	TGTGGAGACCGTTAGCAAGCCTGCGATTGACAACTAC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCGAGTTGAAATTTCCCTACAAAGAATGGAAGGGAGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATCAAAACAAGCAGTAACCGAAACCGCACAGCCTACT
AGTTTTATCTTCCTAAGAGGAATATGAAC	TCGGAAAGCCCCAATTTGATATGAGTAGTAATAGCCTC
GTTTTTATCTTCCTAAGAGGAATATGAAT

>NZ_CP003409|5|5|1030235-1032501|CRT
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTTACTTCTTTGCATAAGTAGTTCTGGGAACTCCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATCGATGCCGATTTGCACTTTGTGTTCTGTTTTTTT
GTTTTTATCTTCCTAAGAGGAATATGAAC	GACGGCACTGTGTTTCTGCACGGGAGGGCTGTAGTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCAGAAAAAGTTCGAACATCTTTCTGACCACAACTGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	AGAATTTCAGCTATTTTGTACTGTGAAAGACCCATTTT
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATCCTTGTTGAATGGAAATTACTTGACTGGTTAAG
GTTTTTATCTTCCTAAGAGGAATATGAAC	GATATACCCAGTGAAGGCATACGTTTCTCGATACGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATGACGAATGCCAGGATTGAGAGGACAGCGATGCTGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCAGATCACAGGTATAAGCGATGTGGACATACTGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ACTATATGTGGTATTCTATTTTTAAAGAACACAATA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTCCTAAAGCAAAGAGATCGTAGTACCATGTGTAGG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TAGAAAAATATGTACCAGAGGAGAAACTCAAAAGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCTGGAACATACGAAACGATCTCCCTTTCGGACTACGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	ACACCTTTGAAATTCGAATGTCAGATCGTTTCAATC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GACATAGACACAACACGAAGTTTCATAGGAAGGGTACTG
GTTTTTATCTTCCTAAGAGGAATATGAAC	AATGGAAACACCTGTAGCTTGAGAGTGAGAGTCTTTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	CCTTCATCTCCCTCCTTTTGCTTCTCCTCTCTGTAT
GTTTTTATCTTCCTAAGAGGAATATGAAC	AAAATGGCCTCTCTTGCTTGCTCTTTTTCTTCCTC
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATGTCGGCGTTTTCGAAAAGATCGTAGTCACCCCTG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TTTCTGTGTAAGCTTCTTGATCTCCTGTTCGATATTA
GTTTTTATCTTCCTAAGAGGAATATGAAC	TCCACAGAGCAAAAGCGAATCTGAATGAGAAAGGAAG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TTTCGTCGTAGACAACTATCTCTCTTTTTACTGTCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CTTTTCATAGACGATGTGGACACTGAAGGGAAAAGA
GTTTTTATCTTCCTAAGAGGAATATGAAC	GTGATCTGCTGGGTGATGTACTTTCCGATCGAAAAGG
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATAATTCGAGAGTTAATTCTGTAGATGTTATGCTCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CCGGGCAATTGTAATGGAGGTTGCAGAGGACGGTGCA
GTTTTTATCTTCCTAAGAGGAATATGAAC	CATCAACACATACACCGATCTCTATTTGTATGTCGAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	TATGGCGCCGTCAACGCCGAATAGCGGTTATCAATCCAA
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATTGGCTATATTCGCAAATCGCCTATATCCCTTGGCC
GTTTTTATCTTCCTAAGAGGAATATGAAC	TGTGGAGACCGTTAGCAAGCCTGCGATTGACAACTAC
GTTTTTATCTTCCTAAGAGGAATATGAAC	GCGAGTTGAAATTTCCCTACAAAGAATGGAAGGGAGC
GTTTTTATCTTCCTAAGAGGAATATGAAC	ATCAAAACAAGCAGTAACCGAAACCGCACAGCCTACT
AGTTTTATCTTCCTAAGAGGAATATGAAC	TCGGAAAGCCCCAATTTGATATGAGTAGTAATAGCCTC
GTTTTTATCTTCCTAAGAGGAATATGAAT	GGCGTGATGTGATAGATGGAAAGGTGAACCACTGCTA
TTTTTTATCCTCCTAATGAGAAATCATAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP003409.1|WP_038033128.1|1020214_1020685_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_038033120.1|1028882_1029866_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	gnl|CDD|187853
NZ_CP003409.1|WP_038033105.1|1041736_1042756_-|N-acetyl-gamma-glutamyl-phosphate-reductase	unknown	unknown	gnl|CDD|234761
NZ_CP003409.1|WP_029682939.1|1032846_1033152_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_162178952.1|1026117_1028352_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	gnl|CDD|273707
NZ_CP003409.1|WP_038033129.1|1019399_1020215_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_038033123.1|1024217_1025276_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	pfam01905_cas7_CAS-I	gnl|CDD|274215
NZ_CP003409.1|WP_011943634.1|1018842_1019418_+|hypothetical-protein	csx22	mkCas0064_csx22_CAS-III-A	unknown
NZ_CP003409.1|WP_052123909.1|1028354_1028873_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	gnl|CDD|366863
NZ_CP003409.1|WP_038033109.1|1038520_1039678_-|aspartate-aminotransferase-family-protein	unknown	unknown	gnl|CDD|235056
NZ_CP003409.1|WP_012310895.1|1034656_1035508_+|GGDEF-domain-containing-protein	unknown	unknown	gnl|CDD|143635
NZ_CP003409.1|WP_038033106.1|1040526_1041720_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	unknown	unknown	gnl|CDD|376687
NZ_CP003409.1|WP_011943618.1|1038318_1038501_+|hypothetical-protein	unknown	unknown	gnl|CDD|238698
NZ_CP003409.1|WP_081980988.1|1023091_1024225_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1	unknown	unknown	unknown
NZ_CP003409.1|WP_012310898.1|1037410_1038232_+|DMT-family-transporter	unknown	unknown	gnl|CDD|273359
NZ_CP003409.1|WP_081952598.1|1035583_1036219_+|YkgJ-family-cysteine-cluster-protein	unknown	unknown	gnl|CDD|223799
NZ_CP003409.1|WP_052123910.1|1036824_1037073_-|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	gnl|CDD|197713
NZ_CP003409.1|WP_038033119.1|1029875_1030157_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	gnl|CDD|187856
NZ_CP003409.1|WP_038033122.1|1025272_1026055_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	gnl|CDD|273860
NZ_CP003409.1|WP_012310897.1|1036492_1036810_-|hypothetical-protein	unknown	unknown	unknown

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP003409.1|WP_038033120.1|1028882_1029866_+|type-I-B-CRISPR-associated-endonuclease-Cas1	cas1	cd09722_cas1_CAS-I-B	5.2e-137	451.0	8.6
NZ_CP003409.1|WP_162178952.1|1026117_1028352_+|CRISPR-associated-helicase-Cas3'	cas3	COG1203_cas3_CAS-I	3.7e-77	254.9	5.2
NZ_CP003409.1|WP_038033123.1|1024217_1025276_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	cas7	pfam01905_cas7_CAS-I	3.5e-73	240.6	0.4
NZ_CP003409.1|WP_038033119.1|1029875_1030157_+|CRISPR-associated-endonuclease-Cas2	cas2	cd09725_cas2_CAS-I:CAS-II:CAS-III:CAS-V	1.5e-26	87.2	0.4
NZ_CP003409.1|WP_038033122.1|1025272_1026055_+|type-I-B-CRISPR-associated-protein-Cas5	cas5	cd09658_cas5_CAS-I-B	1.8e-50	166.3	0.7
NZ_CP003409.1|WP_011943634.1|1018842_1019418_+|hypothetical-protein	csx22	mkCas0064_csx22_CAS-III-A	6.4e-133	434.8	0.3
NZ_CP003409.1|WP_052123909.1|1028354_1028873_+|CRISPR-associated-protein-Cas4	cas4	pfam01930_cas4_CAS-I	4.3e-51	168.0	2.5
NZ_CP003409.1|WP_052123910.1|1036824_1037073_-|helix-turn-helix-transcriptional-regulator	csa3	COG0640_csa3_CAS-I-A	9.4e-19	62.7	0.2

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP003409.1|WP_038033120.1|1028882_1029866_+|type-I-B-CRISPR-associated-endonuclease-Cas1	gnl|CDD|187853	cd09722, Cas1_I-B, CRISPR/Cas system-associated protein Cas1. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas1 is the most universal CRISPR system protein thought to be involved in spacer integration; Cas1 is metal-dependent deoxyribonuclease, also binds RNA; Shown to possess a unique fold consisting of a N-terminal beta-strand domain and a C-terminal alpha-helical domain.	3.61692e-172
NZ_CP003409.1|WP_162178952.1|1026117_1028352_+|CRISPR-associated-helicase-Cas3'	gnl|CDD|273707	TIGR01587, CRISPR-associated_endonuclease/helicase_Cas3, CRISPR-associated helicase Cas3. This model represents the highly conserved core region of an alignment of Cas3, a protein found in association with CRISPR repeat elements in a broad range of bacteria and archaea. Cas3 appears to be a helicase, with regions found by pfam00270 (DEAD/DEAH box helicase) and pfam00271 (Helicase conserved C-terminal domain). Some but not all members have an N-terminal HD domain region (pfam01966) that is not included within this model.	3.38234e-65
NZ_CP003409.1|WP_038033123.1|1024217_1025276_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR	gnl|CDD|274215	TIGR02585, conserved_protein, CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This clade is a member of the DevR family (TIGR01875) and includes the DevR protein of Myxococcus xanthus, a protein whose expression appears to be regulated through a number of means, including both location and autorepression; DevR mutants are incapable of fruiting body development.	1.01448e-66
NZ_CP003409.1|WP_052123910.1|1036824_1037073_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|197713	smart00418, HTH_ARSR, helix_turn_helix, Arsenical Resistance Operon Repressor.	5.52905e-17
NZ_CP003409.1|WP_052123909.1|1028354_1028873_+|CRISPR-associated-protein-Cas4	gnl|CDD|366863	pfam01930, Cas_Cas4, Domain of unknown function DUF83. This domain has no known function. The domain contains three conserved cysteines at its C-terminus.	1.6042e-54
NZ_CP003409.1|WP_038033109.1|1038520_1039678_-|aspartate-aminotransferase-family-protein	gnl|CDD|235056	PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.	0
NZ_CP003409.1|WP_012310898.1|1037410_1038232_+|DMT-family-transporter	gnl|CDD|273359	TIGR00950, Uncharacterized_inner_membrane_transporter_YicL, Carboxylate/Amino Acid/Amine Transporter. [Transport and binding proteins, Amino acids, peptides and amines].	1.19488e-09
NZ_CP003409.1|WP_011943618.1|1038318_1038501_+|hypothetical-protein	gnl|CDD|238698	cd01407, SIR2-fam, SIR2 family of proteins includes silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation, where the acetyl group from the lysine epsilon-amino group is transferred to the ADP-ribose moiety of NAD+, producing nicotinamide and the novel metabolite O-acetyl-ADP-ribose. Sir2 proteins, also known as sirtuins, are found in all eukaryotes and many archaea and prokaryotes and have been shown to regulate gene silencing, DNA repair, metabolic enzymes, and life span. The most-studied function, gene silencing, involves the inactivation of chromosome domains containing key regulatory genes by packaging them into a specialized chromatin structure that is inaccessible to DNA-binding proteins. The oligomerization state of Sir2 appears to be organism-dependent, sometimes occurring as a monomer and sometimes as a multimer.	0.000679217
NZ_CP003409.1|WP_038033106.1|1040526_1041720_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ	gnl|CDD|376687	pfam01960, ArgJ, ArgJ family. Members of the ArgJ family catalyze the first EC:2.3.1.1 and fifth steps EC:2.3.1.35 in arginine biosynthesis.	0
NZ_CP003409.1|WP_012310895.1|1034656_1035508_+|GGDEF-domain-containing-protein	gnl|CDD|143635	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain. Diguanylate-cyclase (DGC) or GGDEF domain: Originally named after a conserved residue pattern, and initially described as a domain of unknown function 1 (DUF1). This domain is widely present in bacteria, linked to a wide range of non-homologous domains in a variety of cell signaling proteins. The domain shows homology to the adenylyl cyclase catalytic domain. This correlates with the functional information available on two GGDEF-containing proteins, namely diguanylate cyclase and phosphodiesterase A of Acetobacter xylinum, both of which regulate the turnover of cyclic diguanosine monophosphate. Together with the EAL domain, GGDEF might be involved in regulating cell surface adhesion in bacteria.	7.90912e-64
NZ_CP003409.1|WP_081952598.1|1035583_1036219_+|YkgJ-family-cysteine-cluster-protein	gnl|CDD|223799	COG0727, COG0727, Predicted Fe-S-cluster oxidoreductase [General function prediction only].	1.88189e-05
NZ_CP003409.1|WP_038033105.1|1041736_1042756_-|N-acetyl-gamma-glutamyl-phosphate-reductase	gnl|CDD|234761	PRK00436, argC, N-acetyl-gamma-glutamyl-phosphate reductase; Validated.	0
NZ_CP003409.1|WP_038033119.1|1029875_1030157_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|187856	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas2 is present in majority of CRISPR/Cas systems along with Cas1; RNAse specific to U-rich regions; Possesses an RRM/ferredoxin fold.	6.22428e-29
NZ_CP003409.1|WP_038033122.1|1025272_1026055_+|type-I-B-CRISPR-associated-protein-Cas5	gnl|CDD|273860	TIGR01895, conserved_hypothetical_protein, CRISPR-associated protein Cas5, subtype I-B/TNEAP. CRISPR is a term for Clustered Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR associated) proteins. This family is represented by TM1800 from Thermotoga maritima. It is related to TIGR01868 (CRISPR-associated protein, CT1976 family).	2.78666e-57

Protein sequences

>NZ_CP003409.1|WP_038033119.1|1029875_1030157_+|CRISPR-associated-endonuclease-Cas2
MRVILVYDISTETKEGVRRLNRVRKIARRYLDHVQKSVFEGELTEGEIEKLKFELQCIIDNDEDFVIIYKMPPSIMIERDILTNTDDPTSNFI
>NZ_CP003409.1|WP_038033120.1|1028882_1029866_+|type-I-B-CRISPR-associated-endonuclease-Cas1
MGKNYYVFSSGRIRRRENSILIEYQDRDGKQQKRFIPVENVEQIFFLGEVDLNSKFLDFAAKNNIVLHFFNYYGYYTGSFYPREKFLSGELLVRQVEHYLDSEKRLSLARKFVEGAIHNFKRNIEKRGFDIVSKISEYQERIKHVATIPELMSCEAHARKLYYSIWEDITGWPFEERSMQPPLNELNALISFGNSLTYSIVLKELYHTHLNPTVSYLHEPGTKRFSLALDISEIFKPIFVDRIIFKLINLRKIKREKHFLQESNGVFLNDEGRRIFVEEFENMLQQTVLHRKLKRKVKYQSFIRLEAYKIIKHLLGEDEYRPLKVWW
>NZ_CP003409.1|WP_052123909.1|1028354_1028873_+|CRISPR-associated-protein-Cas4
MEDFDMLNVSGTMVSYYFTCKRKLWLFAKNIDMEQTQPTTDLIIGKLLNFERFKRERHKEIEIEDCMIDFLTFRGEVIVHETKKSKKFEEAHVWQTKYYMFVLRKYGLNVTHGVIHYPKLMRKLEVNFEDGDEEKIQNALIEIKQIVSKKIPPPVLNRSFCKKCSYYELCYV
>NZ_CP003409.1|WP_162178952.1|1026117_1028352_+|CRISPR-associated-helicase-Cas3'
MEVLENLQVDSGVKELVRKAILYHDLGKVIYAFQRKVGGNVPEDGIPNVPHSFLSIAFIPENTLRELGEGLSRIFLSAVLYHHWRETYLDYLFGRKKESVCKAYKRLLEVGDEIVRLLKEEMRDLCEIELNRPLCEYLSHNSIIDSGLVFPPHLISLLPSIILKELNIKDENYKRYIITSGTVMRADRFASYVETAGNKELLKKADKRLEGDQLETVRRYLERISSKVWQLDLLKDCRGENIILVAPTGTGKTEFALMWSKGKTLFTLPLQSATNMMYERVKNYFGEENVGLLHSDSAVYLFFSSFLKNSFEDREGEVLQIVEQSRFFSYPFVISTGDQVFPSALKYPGYEMIYSILANSYLVIDEIQAYSPEAAAIIVKTAEDVKLLGGRFLIMTATLPGFIRNEILKRAELEEKNIKDVYESIPQGNLLRNLVKVERSLDPVEKAVEFFKEGWRVLIVRNTVRNAIETYRKLVEELGKEDVLLIHSRMTLEDRRKVEKTLEDYRPGEKGRNIILVSTQVVEASMDIDFDILLTDIAPADSLVQRMGRICRKREWTEEFPNTFIYAGSNEKERKELITGVYSEEVVSATLKSLKDMFDIEKPFKLDELSKRKWVEDTYQALSQESNYLKKFRETLDVLDSGYSSEKKHEAHKIFRRVASMSVVPENLKEDLKCELKSVLSYFNFRQVTAKYLVDVPLHHIKSGALEPLEVEAENEQVLKWASALYVLKGSRYEKGLGIFLEEK
>NZ_CP003409.1|WP_038033122.1|1025272_1026055_+|type-I-B-CRISPR-associated-protein-Cas5
MKLLRIEIRASTAHFAIPFFIFERKTFPIPMYSTAIGLICNILNDDSKIESFLNSEFSMAIVGNHEGVVEEYTWLRNLKKDSHIEKFKILKNREINHGIEHPGGQMPTRIQTLVNPRINLFIKAREDVLEMIKQSLENSEYISKIHLGRSEDTVDEINYEFVNCEKKKVFSTGGYTWIPSPEFAGEVCDNYDELYQEIIGSSYKVSSIYTIKNNKRVFDIIPAKLFYGSIPLVHFDVPEILSWNNIPIFLAKIRKSDRGG
>NZ_CP003409.1|WP_038033123.1|1024217_1025276_+|type-I-B-CRISPR-associated-protein-Cas7/Cst2/DevR
MNDVKAITATVVFEASAVNRDENIANNIQSLKKLRREDGVYTFFSRSSMRHHIFNALVRKHGWKPAEVTKDQDVIQFDIKEESILTSEELDFFGYMGTFKEDKSSKKKNNEEKGVSLSRKAPVGLTKAVSMERWEGDMAFYANHDLVQRAREKGEEANPNPFSKEEHFSFYKYSVVVDLENIGKDVVFITEKEKEKLKKLFGVDKLFGVDIKEGEYPFQKGKILIEKSEKAYKISVLLNEKEKQKRLGQFFDVIMNGFEIHSSTESWCVAPVFIIIAFTRLPVTLFNPYVRLDRGKIDVETISQIAKGNTNIKDYRMWGIPSILKGSSEKLCTGLNDLNEWLREVIGGEENS
>NZ_CP003409.1|WP_081980988.1|1023091_1024225_+|type-I-B-CRISPR-associated-protein-Cas8b1/Cst1
MKIPQIKKKSKELLSKFDGRDLEEIRNLLLQFEKEKFRSHLSEIICSIFRKPNLSGSERCFLCGNPLEVSESISIRQRKQFSRILFKEFSSSEGKFPNSFWNISNEYHLCDLCSQLALFRHFVFPKNSEKEIFVNVPSFKAIWYLNEAIKAYRDLNVELSVSRAVAEVHMKLQRLLGVWERQNVEIVNYDGKSYSVYYMPQRTIDLLLNTRIASILNFINSIKIFEAVIYPERLSKLIEVEYLLLKYILKPGDNSKIKEYIEVFDPKKKGDYARVIPELFQEARNTLGVETVVPVWKMRELGREVSQLFERTKYRLLELIRLAKKDEVYHLLLKTYMANKKPFPEELNRVFSEDDENFKNLMFSYVSGIISGGEENE
>NZ_CP003409.1|WP_038033128.1|1020214_1020685_-|hypothetical-protein
MHVKKVAYGGLISALVVLLLYIGNFTKSKIFFAALSSVFTGVLVELFGVGSVPIIIATNVLVFLLVPNPGYASLFFVLSFYGFLRKKPILIRFLYLNASTLLLVLFASKFFNAELPDVSFFLYALGFLGVQVAFFVYDYLYNRILQEFLRIIRRKN
>NZ_CP003409.1|WP_038033129.1|1019399_1020215_-|hypothetical-protein
MFGYIKPLKCELKVKEYEEFRRYYCGVCKALKKYSIIPRFLLTYEAASLGLLFSSLNNSDLKRKRELCIFTLKKVDFYSSSEIDEVARIFVALLREKLKDNYIDRKNPVYLFASAFLKKDPEISRLFENFYEMERKEQDFEILAEKQGKIVGTILSKMVKEETQRKILYYLGLSLGKWLYIIDALDDFEKDKRKNVFNPLVKKYNGDLEKARSELRPQLKKCIDEMWKAYDLLDIKRNKTILDNIVYLGIPFITENVLIGKTCNLNHSTIL
>NZ_CP003409.1|WP_011943634.1|1018842_1019418_+|hypothetical-protein
MVGRFPIYVEEEFISDEKKWEFVLSKIESIDPAVASFVEEAPDGTMRVIGPFRARSGYALVISSPLSSLFHFLVLNVPRVLNAVVKPGRAYVEIYEKRDLFDSPGVFTLKVKGAKGFSLKQTKEDMKLFLGVEVEPAFQPVSLRSTKNGVIMTLKTLTPETTALVKLSRLCGTGENRRYGHGDVEIYRIVE
>NZ_CP003409.1|WP_029682939.1|1032846_1033152_+|hypothetical-protein
MIFVGDISTLDMCRRNHAGEIKLKDVLTKNEGLQRLQKLRWWYLYEVPATMAGLAVPAAKRVKTELKTPSDLWILIDNKWLVFQIEAEKKPTKRSEPFTSQ
>NZ_CP003409.1|WP_012310895.1|1034656_1035508_+|GGDEF-domain-containing-protein
MNNGHFEFLKKVFYSLQPVIGFVLLESDSENGKLSVRVSEGKVPPFFKEGFFFTSEELTHLINVCSSTSAIISVLKDSKYRRSLILYLKRPLSKDALLLIQTLLTTFEREDLSFGIKELEYMAYHDPLTGLPNRRYLFELGKRYLDLAKREGKKVFVLFMDLAGFKAINDTYGHLVGDEILRTVSKRILDRVRRSDVVARYGGDEFTILLYDMKEEYLKSFLERILSAFREPVRVRNTVLTVASNIGVAGFPEDGENLEELLKVADMRMYKAKGMRALYLLRS
>NZ_CP003409.1|WP_081952598.1|1035583_1036219_+|YkgJ-family-cysteine-cluster-protein
MERLIELSSQVIKLYEELDGIQKDLPTCGGCRECCNTPSVNIEATVLEFIPLAIHLLQNDSIEKWLEILENVDELDRCVLFDPHSERGGCSYHSFRPLVCRLFSGSYVLRKEKPEVWGCKYLKPVLSSLIESLPNCSEVYSKLLAIDFFLAQERYPINIALKKALEYVYYRIFPVFNFKNAWGKSKKEKGCLFDIPSIMAPPRGFEPLPLA
>NZ_CP003409.1|WP_012310897.1|1036492_1036810_-|hypothetical-protein
MSWRGWLVLIFSLWLIVASLIPGIVGSKGANIADFLIVGVVLLIAGIFMLGTSKVAGWIELLLGIWLIIAAFIPGITGSKGAALANGLVVGIIALIFAFFDRKKQ
>NZ_CP003409.1|WP_052123910.1|1036824_1037073_-|helix-turn-helix-transcriptional-regulator
MFSNPTRLRILLLLSKKEMCVGKIAEILRMDQSAVSAQLKVLRHLNLVKAKRHGRYMRYKLNNKHVKNVLREGFKYVLKISQ
>NZ_CP003409.1|WP_012310898.1|1037410_1038232_+|DMT-family-transporter
MKPVFYLLLSVLAASFSGILIKLSSLPPATIAFYRVFIASLFFFLVKRRVELFSLKKEVLSLAAGFFLAMHFFFWVSAFNHTTVAGAVIPLTLQPVLTGLLSWLVYGERLGPFRIVTGSTVVAGVVLALAGKEGFSGISRGDLLAVIGVVFFCGYLVLGRYLNRAMGSMNFSLKTHALASTVLAFLVPSFRVVEAREWFILIGLGVGCSFLGYLFINLSLKYLPSSVVGVVLVGEPVLSILWSFLLLGETVTFFEIIGFIVAVVGLVLFILKT
>NZ_CP003409.1|WP_011943618.1|1038318_1038501_+|hypothetical-protein
MPYIYRCKKCGAIYYSATSIEYQLNKYCEKCGGELEQLGEEGEVMEMEKEEEESKKKKKK
>NZ_CP003409.1|WP_038033109.1|1038520_1039678_-|aspartate-aminotransferase-family-protein
MYLMNTYSRFSATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTFGGNVFFANTGTEANEAAIKIARKYGKKKSEKKYKILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFNNIEDLRKKMSEDVCAVFLEPIQGESGIVPATKEFLEGARKLCDEYDALLVFDEVQCGMGRTGKLFAYQRYGVVPDVLTTAKGLGGGVPIGAVIVNERADVLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEFDLVADVRGMGLMIGIQFREEVNNREIATKCFENKLLVVPAGNNTIRLLPPLTVEYGEIDLAVETLKKVLREI
>NZ_CP003409.1|WP_038033106.1|1040526_1041720_-|bifunctional-glutamate-N-acetyltransferase/amino-acid-acetyltransferase-ArgJ
MFTPKGFRFAGVHCKIKKKRRDLGIIFSEAPCVAAGVFTTNVVKAAPVIYDMEILKKNPNGIRAIVVNSGVANACTGEQGMINARRMAEKAAEELGVPVESVLVSSTGVIGVQLPMDKVENGIEEAVKVLSNDPLPFAEAIMTTDTKVKMHSTKVTIDGKEITVLGIAKGSGMIHPNMATMLSFITTDAKISEEALKKLLKLSVDDSYNMIDVDGDTSTNDMVIVLANGLAGNTTIQPETDGFWKLYEAVHEVNQVLAEKIVEDGEGATKVMEVHVVNAPDMKSARLIARSIVSSNLVKTAVYGEDANWGRIIAAAGYSGATFDPDKLDLFFESEAGRIKVAENGQGVPFDEEEAKKILSEKKIRIILDMKQGKETAKAWGCDLTEKYVEINGRYRT
>NZ_CP003409.1|WP_038033105.1|1041736_1042756_-|N-acetyl-gamma-glutamyl-phosphate-reductase
MIRAGIIGVTGYTGLELVRLLKSHPEVKITYLSSRTYAGKKLEEVFPSTLEDSVLSEFDPEEVSKNCDVLFTALPAGASYDLVKEIEGVRVIDLGADFRFDNPKVYKEWYEKELPGYENVKRVYGLPELHREEIKNAQVVGNPGCYPTSVILALAPALKHNLVDPETILVDAKSGVSGAGRKEKVDYLFSEVNESLRPYNVAKHRHVPEMEQELEKISGKKVNVVFTPHLVPMTRGILSTIYVKTDKSLEEIYEAYLEFYRNEPFVHVLPTGIYPSTKWCYGSNHVFIGMQMEERTNTLILMSAIDNLVKGASGQAVQNMNIMFGLAETKGLEFTPIYP

Crispr_ID: NZ_CP003409_6

• CRISPR_ID: NZ_CP003409_6
• CRISPR_location: 1169718-1171014
• CRISPR_type: Orphan
• Repeat_type: III-A
• Spacer_info: 19 spacers

Consensus repeat of NZ_CP003409_6

Consensus_repeat	Method
GTTTCAATAATTCCTTAGAGGTATGGAAAC	PILER-CR
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CRISPRCasFinder
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CRT

spacers of NZ_CP003409_6

>6.1|1169748|35|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GATTCCAAAAAGTTCGTTCTGTTGCATACACTTCA
>6.2|1169813|35|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CTCCCGAGTAGAGATTGTAATAGGTGTTTATCTCT
>6.3|1169878|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CACGGAACGTTTTATGTGAAAGATCACGGTCGAGAC
>6.4|1169944|38|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TAGCACCATTCCACAGCCATTTTCAACTACTTTCATGT
>6.5|1170012|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GCGTTGACTTTTACGATATTGAATCCAACTTCATCA
>6.6|1170078|38|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TCTTCACATTTGAGATAGAACCAACAAAGGACGCAAAA
>6.7|1170146|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GTCGGCTCTTCTTCTGCGAGCTTTTCCCACTCGGCTT
>6.8|1170213|38|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
AGTTACATCTACGTTACAAAATAGGCAATAGGCGGCTA
>6.9|1170281|39|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
AAACGTATGTCATCGAATTGCGCTTCACAAGGTCACGGG
>6.10|1170350|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
ACGGCATAGGCTTTGACCATGCAAGGGCTTTGGACTA
>6.11|1170417|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TTTGTATTTCAGATGGTTTTGCCATACTCTGAACCA
>6.12|1170483|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TTGCTTCGACCATATGGCCAAATCTTGCTCGAATCT
>6.13|1170549|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CCTGGTAAGAGTTCTCTATACAGTTGTAATGCATCTT
>6.14|1170616|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
GCTACAGCAACGAGGTCGCACGCTAGGGCTTTGACG
>6.15|1170682|38|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
TTTTTTCGGGGGCTTTCCCGCTACTCTGGGCTTTCATT
>6.16|1170750|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CGGTGGGAATGCTGAGAGATTTGGGAAACGTTTTTGT
>6.17|1170817|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
AGTGCGTTCTGAAAACCCGTGATGGATTCATTGTCG
>6.18|1170883|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
ATTTCTCAAGTCTATTCATTTTGTCAGTCAGCCTGA
>6.19|1170949|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
AAATTTTGTCTTCGTTTTTGTCTTGTAAGGTGATAT

CRISPR arrays and Neighbor proteins around NZ_CP003409_6

CRISPR arrays

The CRISPR arrays of NZ_CP003409_6

>merge|NZ_CP003409|6|1169718-1171014|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATAATTCCTTAGAGGTATGGAAACGATTCCAAAAAGTTCGTTCTGTTGCATACACTTCAGTTTCAATAATTCCTTAGAGGTATGGAAACCTCCCGAGTAGAGATTGTAATAGGTGTTTATCTCTGTTTCAATAATTCCTTAGAGGTATGGAAACCACGGAACGTTTTATGTGAAAGATCACGGTCGAGACGTTTCAATAATTCCTTAGAGGTATGGAAACTAGCACCATTCCACAGCCATTTTCAACTACTTTCATGTGTTTCAATAATTCCTTAGAGGTATGGAAACGCGTTGACTTTTACGATATTGAATCCAACTTCATCAGTTTCAATAATTCCTTAGAGGTATGGAAACTCTTCACATTTGAGATAGAACCAACAAAGGACGCAAAAGTTTCAATAATTCCTTAGAGGTATGGAAACGTCGGCTCTTCTTCTGCGAGCTTTTCCCACTCGGCTTGTTTCAATAATTCTTTAGAGGTATGGAAACAGTTACATCTACGTTACAAAATAGGCAATAGGCGGCTAGTTTCAATAATTCCTTAGAGGTATGGAAACAAACGTATGTCATCGAATTGCGCTTCACAAGGTCACGGGGTTTCAATAATTCCTTAGAGGTATGGAAACACGGCATAGGCTTTGACCATGCAAGGGCTTTGGACTAGTTTCAATAATTCCTTAGAGGTATGGAAACTTTGTATTTCAGATGGTTTTGCCATACTCTGAACCAGTTTCAATAATTCCTTAGAGGTATGGAAACTTGCTTCGACCATATGGCCAAATCTTGCTCGAATCTGTTTCAATAATTCCTTAGAGGTATGGAAACCCTGGTAAGAGTTCTCTATACAGTTGTAATGCATCTTGTTTCAATAATTCCTTAGAGGTATGGAAACGCTACAGCAACGAGGTCGCACGCTAGGGCTTTGACGGTTTCAATAATTCCTTAGAGGTATGGAAACTTTTTTCGGGGGCTTTCCCGCTACTCTGGGCTTTCATTGTTTCAATAATTCCTTAGAGGTATGGAAACCGGTGGGAATGCTGAGAGATTTGGGAAACGTTTTTGTGTTTCAATAATTCCTTAGAGGTATGGAAACAGTGCGTTCTGAAAACCCGTGATGGATTCATTGTCGGTTTCAATAATTCCTTAGAGGTATGGAAACATTTCTCAAGTCTATTCATTTTGTCAGTCAGCCTGAGTTTCAATAATTCCTTAGAGGTATGGAAACAAATTTTGTCTTCGTTTTTGTCTTGTAAGGTGATATGTTTCAATAATTCCTTAGAGGTATGGAAAC

>NZ_CP003409|6|6|1169718-1171014|PILER-CR
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GATTCCAAAAAGTTCGTTCTGTTGCATACACTTCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTCCCGAGTAGAGATTGTAATAGGTGTTTATCTCT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CACGGAACGTTTTATGTGAAAGATCACGGTCGAGAC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TAGCACCATTCCACAGCCATTTTCAACTACTTTCATGT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GCGTTGACTTTTACGATATTGAATCCAACTTCATCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TCTTCACATTTGAGATAGAACCAACAAAGGACGCAAAA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GTCGGCTCTTCTTCTGCGAGCTTTTCCCACTCGGCTT
GTTTCAATAATTCTTTAGAGGTATGGAAAC	AGTTACATCTACGTTACAAAATAGGCAATAGGCGGCTA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AAACGTATGTCATCGAATTGCGCTTCACAAGGTCACGGG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	ACGGCATAGGCTTTGACCATGCAAGGGCTTTGGACTA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTTGTATTTCAGATGGTTTTGCCATACTCTGAACCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTGCTTCGACCATATGGCCAAATCTTGCTCGAATCT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CCTGGTAAGAGTTCTCTATACAGTTGTAATGCATCTT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GCTACAGCAACGAGGTCGCACGCTAGGGCTTTGACG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTTTTTCGGGGGCTTTCCCGCTACTCTGGGCTTTCATT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CGGTGGGAATGCTGAGAGATTTGGGAAACGTTTTTGT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AGTGCGTTCTGAAAACCCGTGATGGATTCATTGTCG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	ATTTCTCAAGTCTATTCATTTTGTCAGTCAGCCTGA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AAATTTTGTCTTCGTTTTTGTCTTGTAAGGTGATAT
GTTTCAATAATTCCTTAGAGGTATGGAAAC

>NZ_CP003409|6|7|1169718-1171014|CRISPRCasFinder
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GATTCCAAAAAGTTCGTTCTGTTGCATACACTTCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTCCCGAGTAGAGATTGTAATAGGTGTTTATCTCT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CACGGAACGTTTTATGTGAAAGATCACGGTCGAGAC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TAGCACCATTCCACAGCCATTTTCAACTACTTTCATGT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GCGTTGACTTTTACGATATTGAATCCAACTTCATCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TCTTCACATTTGAGATAGAACCAACAAAGGACGCAAAA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GTCGGCTCTTCTTCTGCGAGCTTTTCCCACTCGGCTT
GTTTCAATAATTCTTTAGAGGTATGGAAAC	AGTTACATCTACGTTACAAAATAGGCAATAGGCGGCTA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AAACGTATGTCATCGAATTGCGCTTCACAAGGTCACGGG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	ACGGCATAGGCTTTGACCATGCAAGGGCTTTGGACTA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTTGTATTTCAGATGGTTTTGCCATACTCTGAACCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTGCTTCGACCATATGGCCAAATCTTGCTCGAATCT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CCTGGTAAGAGTTCTCTATACAGTTGTAATGCATCTT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GCTACAGCAACGAGGTCGCACGCTAGGGCTTTGACG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTTTTTCGGGGGCTTTCCCGCTACTCTGGGCTTTCATT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CGGTGGGAATGCTGAGAGATTTGGGAAACGTTTTTGT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AGTGCGTTCTGAAAACCCGTGATGGATTCATTGTCG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	ATTTCTCAAGTCTATTCATTTTGTCAGTCAGCCTGA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AAATTTTGTCTTCGTTTTTGTCTTGTAAGGTGATAT
GTTTCAATAATTCCTTAGAGGTATGGAAAC

>NZ_CP003409|6|6|1169718-1171014|CRT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GATTCCAAAAAGTTCGTTCTGTTGCATACACTTCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTCCCGAGTAGAGATTGTAATAGGTGTTTATCTCT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CACGGAACGTTTTATGTGAAAGATCACGGTCGAGAC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TAGCACCATTCCACAGCCATTTTCAACTACTTTCATGT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GCGTTGACTTTTACGATATTGAATCCAACTTCATCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TCTTCACATTTGAGATAGAACCAACAAAGGACGCAAAA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GTCGGCTCTTCTTCTGCGAGCTTTTCCCACTCGGCTT
GTTTCAATAATTCTTTAGAGGTATGGAAAC	AGTTACATCTACGTTACAAAATAGGCAATAGGCGGCTA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AAACGTATGTCATCGAATTGCGCTTCACAAGGTCACGGG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	ACGGCATAGGCTTTGACCATGCAAGGGCTTTGGACTA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTTGTATTTCAGATGGTTTTGCCATACTCTGAACCA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTGCTTCGACCATATGGCCAAATCTTGCTCGAATCT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CCTGGTAAGAGTTCTCTATACAGTTGTAATGCATCTT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	GCTACAGCAACGAGGTCGCACGCTAGGGCTTTGACG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	TTTTTTCGGGGGCTTTCCCGCTACTCTGGGCTTTCATT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CGGTGGGAATGCTGAGAGATTTGGGAAACGTTTTTGT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AGTGCGTTCTGAAAACCCGTGATGGATTCATTGTCG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	ATTTCTCAAGTCTATTCATTTTGTCAGTCAGCCTGA
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AAATTTTGTCTTCGTTTTTGTCTTGTAAGGTGATAT
GTTTCAATAATTCCTTAGAGGTATGGAAAC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP003409.1|WP_038034674.1|1179274_1180423_-|exonuclease-SbcCD-subunit-D	unknown	unknown	gnl|CDD|223497
NZ_CP003409.1|WP_038033060.1|1163366_1164635_+|alpha-amylase	unknown	unknown	gnl|CDD|200452
NZ_CP003409.1|WP_011943680.1|1174656_1175490_-|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein	unknown	unknown	gnl|CDD|235747
NZ_CP003409.1|WP_004082152.1|1164649_1164931_+|DUF503-domain-containing-protein	unknown	unknown	gnl|CDD|224467
NZ_CP003409.1|WP_012310999.1|1166612_1167434_-|carboxylating-nicotinate-nucleotide-diphosphorylase	unknown	unknown	gnl|CDD|272894
NZ_CP003409.1|WP_011943678.1|1172756_1173266_-|dihydrofolate-reductase	unknown	unknown	gnl|CDD|223340
NZ_CP003409.1|WP_038034678.1|1176111_1176735_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_012310993.1|1159652_1161314_+|phosphodiester-glycosidase-family-protein	unknown	unknown	gnl|CDD|378342
NZ_CP003409.1|WP_011943677.1|1171137_1172721_-|bifunctional-aspartate-carbamoyltransferase-catalytic-subunit/aspartate-carbamoyltransferase-regulatory-subunit	unknown	unknown	gnl|CDD|237369
NZ_CP003409.1|WP_012896366.1|1165511_1166168_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_011943679.1|1173253_1174660_-|NADPH-dependent-glutamate-synthase	unknown	unknown	gnl|CDD|183780
NZ_CP003409.1|WP_012896369.1|1180807_1183171_-|endopeptidase-La	unknown	unknown	gnl|CDD|223542
NZ_CP003409.1|WP_029683603.1|1180424_1180811_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_038033061.1|1158351_1159656_+|pyrimidine-nucleoside-phosphorylase	unknown	unknown	gnl|CDD|223291
NZ_CP003409.1|WP_038033058.1|1168347_1169073_-|aspartate-dehydrogenase	unknown	unknown	gnl|CDD|237342
NZ_CP003409.1|WP_011943681.1|1175473_1176094_-|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|224054
NZ_CP003409.1|WP_012311000.1|1167438_1168335_-|quinolinate-synthase-NadA	unknown	unknown	gnl|CDD|236489
NZ_CP003409.1|WP_012896370.1|1183124_1183610_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl|CDD|223873
NZ_CP003409.1|WP_038033059.1|1164931_1165528_+|HD-domain-containing-protein	unknown	unknown	gnl|CDD|224627
NZ_CP003409.1|WP_012896363.1|1161313_1163365_+|elongation-factor-G	unknown	unknown	gnl|CDD|237186

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP003409.1|WP_038034674.1|1179274_1180423_-|exonuclease-SbcCD-subunit-D	gnl|CDD|223497	COG0420, SbcD, DNA repair exonuclease [DNA replication, recombination, and repair].	6.74616e-65
NZ_CP003409.1|WP_038033060.1|1163366_1164635_+|alpha-amylase	gnl|CDD|200452	cd11313, AmyAc_arch_bac_AmyA, Alpha amylase catalytic domain found in archaeal and bacterial Alpha-amylases (also called 1,4-alpha-D-glucan-4-glucanohydrolase). AmyA (EC 3.2.1.1) catalyzes the hydrolysis of alpha-(1,4) glycosidic linkages of glycogen, starch, related polysaccharides, and some oligosaccharides. This group includes firmicutes, bacteroidetes, and proteobacteria. The Alpha-amylase family comprises the largest family of glycoside hydrolases (GH), with the majority of enzymes acting on starch, glycogen, and related oligo- and polysaccharides. These proteins catalyze the transformation of alpha-1,4 and alpha-1,6 glucosidic linkages with retention of the anomeric center. The protein is described as having 3 domains: A, B, C. A is a (beta/alpha) 8-barrel; B is a loop between the beta 3 strand and alpha 3 helix of A; C is the C-terminal extension characterized by a Greek key. The majority of the enzymes have an active site cleft found between domains A and B where a triad of catalytic residues (Asp, Glu and Asp) performs catalysis. Other members of this family have lost the catalytic activity as in the case of the human 4F2hc, or only have 2 residues that serve as the catalytic nucleophile and the acid/base, such as Thermus A4 beta-galactosidase with 2 Glu residues (GH42) and human alpha-galactosidase with 2 Asp residues (GH31). The family members are quite extensive and include: alpha amylase, maltosyltransferase, cyclodextrin glycotransferase, maltogenic amylase, neopullulanase, isoamylase, 1,4-alpha-D-glucan maltotetrahydrolase, 4-alpha-glucotransferase, oligo-1,6-glucosidase, amylosucrase, sucrose phosphorylase, and amylomaltase.	5.93895e-159
NZ_CP003409.1|WP_011943680.1|1174656_1175490_-|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein	gnl|CDD|235747	PRK06222, PRK06222, sulfide/dihydroorotate dehydrogenase-like FAD/NAD-binding protein.	2.14622e-169
NZ_CP003409.1|WP_004082152.1|1164649_1164931_+|DUF503-domain-containing-protein	gnl|CDD|224467	COG1550, COG1550, Uncharacterized protein conserved in bacteria [Function unknown].	8.45038e-39
NZ_CP003409.1|WP_012310999.1|1166612_1167434_-|carboxylating-nicotinate-nucleotide-diphosphorylase	gnl|CDD|272894	TIGR00078, Probable_nicotinate-nucleotide_pyrophosphorylase, nicotinate-nucleotide pyrophosphorylase. Synonym: quinolinate phosphoribosyltransferase (decarboxylating) [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides].	1.66809e-123
NZ_CP003409.1|WP_011943678.1|1172756_1173266_-|dihydrofolate-reductase	gnl|CDD|223340	COG0262, FolA, Dihydrofolate reductase [Coenzyme metabolism].	1.4204e-38
NZ_CP003409.1|WP_012310993.1|1159652_1161314_+|phosphodiester-glycosidase-family-protein	gnl|CDD|378342	pfam09992, NAGPA, Phosphodiester glycosidase. This is a family conserved from bacteria to humans. The structure of a member from Bacteroides has been crystallized and modelled onto the luminal region of the human member of the family, the transmembrane glycoprotein N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase. There is some conservation of potentially functional residues, implying that in the bacterial members this family acts in some way as a phosphodiester glycosidase. The human protein is also present, so the eukaryotic members are likely to be catalyzing the second step in the formation of the mannose 6-phosphate targeting signal on lysosomal enzyme oligosaccharides.	2.89361e-21
NZ_CP003409.1|WP_011943677.1|1171137_1172721_-|bifunctional-aspartate-carbamoyltransferase-catalytic-subunit/aspartate-carbamoyltransferase-regulatory-subunit	gnl|CDD|237369	PRK13376, pyrB, bifunctional aspartate carbamoyltransferase catalytic subunit/aspartate carbamoyltransferase regulatory subunit; Provisional.	0
NZ_CP003409.1|WP_011943679.1|1173253_1174660_-|NADPH-dependent-glutamate-synthase	gnl|CDD|183780	PRK12831, PRK12831, putative oxidoreductase; Provisional.	0
NZ_CP003409.1|WP_012896369.1|1180807_1183171_-|endopeptidase-La	gnl|CDD|223542	COG0466, Lon, ATP-dependent Lon protease, bacterial type [Posttranslational modification, protein turnover, chaperones].	0
NZ_CP003409.1|WP_038033061.1|1158351_1159656_+|pyrimidine-nucleoside-phosphorylase	gnl|CDD|223291	COG0213, DeoA, Thymidine phosphorylase [Nucleotide transport and metabolism].	0
NZ_CP003409.1|WP_038033058.1|1168347_1169073_-|aspartate-dehydrogenase	gnl|CDD|237342	PRK13303, PRK13303, aspartate dehydrogenase.	5.40643e-115
NZ_CP003409.1|WP_011943681.1|1175473_1176094_-|ABC-transporter-ATP-binding-protein	gnl|CDD|224054	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms].	3.92331e-70
NZ_CP003409.1|WP_012311000.1|1167438_1168335_-|quinolinate-synthase-NadA	gnl|CDD|236489	PRK09375, PRK09375, quinolinate synthase NadA.	2.81898e-159
NZ_CP003409.1|WP_012896370.1|1183124_1183610_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl|CDD|223873	COG0802, COG0802, Predicted ATPase or kinase [General function prediction only].	3.81394e-48
NZ_CP003409.1|WP_038033059.1|1164931_1165528_+|HD-domain-containing-protein	gnl|CDD|224627	COG1713, COG1713, Predicted HD superfamily hydrolase involved in NAD metabolism [Coenzyme metabolism].	6.22297e-74
NZ_CP003409.1|WP_012896363.1|1161313_1163365_+|elongation-factor-G	gnl|CDD|237186	PRK12740, PRK12740, elongation factor G-like protein EF-G2.	0

Protein sequences

>NZ_CP003409.1|WP_038033058.1|1168347_1169073_-|aspartate-dehydrogenase
MTVLIIGMGNIGKKLVELGNFEKIYAYDRISKDIPGVVRLGEFQVPSDVSTVVECASPEAVKEYSLQILKSPVNYIIISTSAFADEVFRERFFNELKNSPARVFFPSGAIGGLDVLSSIKDFVENVRIETIKHPKSLGLDLKGKTVVFEGSVEEASKLFPRNINVASTIGLVVGFEKVKVTIVADPDANHNVHIVRISSAIGNYEFKIENIPSPENPKTSMLTVYSILRTLRNLESKIVFG
>NZ_CP003409.1|WP_012311000.1|1167438_1168335_-|quinolinate-synthase-NadA
MVDEILKLKKEKGYIILAHNYQIPELQDIADFVGDSLQLARKAMELSEKKILFLGVDFMAELVKILNPDKKVIVPDRSATCPMANHLTPEIIREYREKFPDVPVVLYVNSTSECKALADVICTSANAVEVVKKLDSSVVIFGPDRNLGEYVAEKTGKKVITIPENGHCPVHQFNAESIDAVRKKYPDAKVIVHPESPKPVRDKADYVGSTGQMEKIPEKDPSRIFVIGTEIGMIHKLKKKFPDREFVPLEMAVCVNMKKNTLENTLHALQTESFEVILPKEVIEKAKKPILRMFELMG
>NZ_CP003409.1|WP_012310999.1|1166612_1167434_-|carboxylating-nicotinate-nucleotide-diphosphorylase
MEKILDLLMSFVKEDEGKLDLASFPLRNTTTSAHLLLKAENVVASGIEVSRMFLEKMGLLSKFRVEDGEYLEKAGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHAKIAATRKTLPGLGVLQKIAVVHGGGDPHRLDLSGCVMIKDNHLKMYGSVERAVQEVRKIIPFTTKIEVEVENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITEENVSLYDFETVDVISSSRLTLQEVFVDLSLEIQR
>NZ_CP003409.1|WP_012896366.1|1165511_1166168_+|hypothetical-protein
MKRSSKIVLVVVLIAVALTAVLFLYYRSFLTSSDYRAAEVHYLFRVGDNSYFVRIDDSKRMVFVVSFPKESFNPERREAIISERPLSDLEKMENLLEVKAERAFYSVMSEEEFLKLCQNLLGKQCESFPDFVKEFSKRKLKFFDFLFVGSWLKKFGFNNLNRFSLYKFFEKISNYAVDVFEAPTVTEKPILIEVQGKKYERLYLDSEKLKAISEEMKR
>NZ_CP003409.1|WP_038033059.1|1164931_1165528_+|HD-domain-containing-protein
MVVITNELESIMERLLSRKRINHVRSVVEFSRKLGEMYGADSNKIELAALSHDLFRDVPPRKLLKMAQAYGLKISELERTHPVLLHGKVAAEFLKRRFNVEDEEVLNAVAYHTSGHVSFRTVGKILFIADSLEFTRDFPGVDELRRIAFRNLEEGFFQVLKNKIFYAVGKNYLLIPETVELWNSILMRRGGLVDEEVE
>NZ_CP003409.1|WP_004082152.1|1164649_1164931_+|DUF503-domain-containing-protein
MSVGVVSLRVRLFGVRSLKEKRGILKRLMNDLRKKYNISISEVGAHDSKSFFEIGIAMVNTDRAVIERVFDSIIDYLDLYPGMEVEEIEREVW
>NZ_CP003409.1|WP_038033060.1|1163366_1164635_+|alpha-amylase
MNFKRLIIYEAFARAYPGEKGKKFDSLIKDLERLKGMGINTVWLMPIHPTGIEGRKGTLGSPYAIRDYYEIDPFIGTKDDFKRFVKRAHELNMYVLMDMVLNHAAADNVLVRKHPEWFLRDENGNPTRKVPDWTDIVDFDYSNGELRKYMINMMKYWVEEFDVDGFRCDVAGLVPLDFWLQARKELDPVKRLIWLSETHDPYMYQAFDITYDYDGYYRFRDFIEGRGSLREYVDFLRMQDHIYPRGYIKMRFLENHDQPRIAKFIEEDSLIHWIAFLFTFKGVPLVHNGQEYGLKEDVDIFNEYTLPFPMEENRVSILHRKLAHYRYGTGVFTEGEMLFVKNDQPEKVISYLWRYENRYILCVLNPLLENTKVTLDFSGIWESACIHSKNVFNDEIVRVPVKNSRAIVEIGKEPLILSFVLY
>NZ_CP003409.1|WP_012896363.1|1161313_1163365_+|elongation-factor-G
MGGLQNVRSATLIGHNGSGKSLLLAQILYKSGLIDKADTKYVDYDPVEEEKGASFSSHVASLEWKGKKVYLIDTPGFSDFISEVINGIFVSENIISVVNAVAGVEIQTERTWNMADEMKKPIIVFVNQMDKERANFENVVAELKERFSRKIVPVVVPIGAAENFEGVVDLLKKKVYRYDGDKVQEEDMPENFNDMRSEILEDIVEQDEELMMRYLDGEEIGYDELMRVLRESYKKGEIVPVLSGSALKGIGLDLLLDYLGDIGVSPEEAPSYKALLEDGTEIEVKFSEEEPFCAYIFKSVVDQFVGRITFAKVIAGVLRSGDTIVNVQKDVSEKLGHIYVPILKQQKEVESAGPGEIVVLLKLKEGAVGETLAHRDRRVKIVPPAFPEPMFSRSVHPKSKSDIDKISNGLSRLSDSDPTFVWEYDSETGETVVSGLGAMHLDVMIERLKKIFGVDVEVGKPKIAYRETITTTAVAEHKHKKQTGGHGQYGHVKIQLEPLPRGQGYEFVDKIVGGVIPRNFIPSVDKGIREAMKKGVLAGYPVTDVRVILFDGSYHEVDSSDISFQIAAIQAFKKGMEAAKPVILEPIMEVEVFVPEENAGDVMGEISSRRGRPLGMEPSGKGMVKVKAEVPLAEMLDFSSKLSSITSGRGYFTMRFQRYEIVPPNIQEKIIEERRREMQEQEK
>NZ_CP003409.1|WP_012310993.1|1159652_1161314_+|phosphodiester-glycosidase-family-protein
MKQIILVLLIFASVVFGSYLISGGKAFPLRTVFSEGIYYVCAEDLAPAGVGYIHSNGYHYIVYDNHVLFIKEHETIFDFVEKLSPPIFADGLLFVPIDALKKVMEGYQVYTKGEKVLIYDSLPIVLSAAKEKNGVTITYTGTIVPDMVSVEKSMGKVRINLSPVVVSLPNVSEDIKVELEKNGLSFVVDVGNFYPDVEYSIGDGKLLFRFLLVEGFFGRQEVADGVVFERKIEEFDEGEKTVVNYLIMDPEKVTIKPVVVENGFGTIERLDEMVKRVGGIAGINGNYFDPITKFPIGLVVIDGKPYSAMFSGRPVFAITEDNEVFIGRVIVDVTLMVKDVLFLVKGINTLGEGEVLVYTKEFSKEIPKKDDKIYFVVKDNKVSQIGYKSHAENSEYVVSISKKYEEYLSDLKEGDEVYISLQPNIPLRIKQAVEGGPLLIQNGAPIPDALEEKARYGGGIAYAKAPRTVIATKDGKLWFLVFEGYNHITRGLTYDELVDFLVSRGFEDAMCVDGGSSSVMAVAGSLFGRTENSTAAIPVGIVVWEKKKTEVGE
>NZ_CP003409.1|WP_038033061.1|1158351_1159656_+|pyrimidine-nucleoside-phosphorylase
MRAYDVILKKRNGEKLSREEIEFMVGGYVKGEIPDYQMAAFLMAVYFRHLDEEETYYFTETMMRSGEVLDLSEIPGTKVDKHSTGGVGDKTTLVVAPLVASAGVPVAKMSGRALGHTGGTIDKLESIPGFRTELSLEEFIENVKKYGIAIVGQTGNLVPADKKIYALRDATATVDEISLIASSIMSKKLAGGSDAFVLDVKFGTGAFMKGFEDAKKLAFLMLRIAQQHGKKAAAVLSNMDQPLGRAVGNSLEVIEAIETLKGNGPEDLKELSLTLGALMLELAGVANFEEGKKILRKKLETGEALDKFRLLVKAQGGDERVVDDPWRVLPVAGQVVDFSAEREGYVSKIDAEKVGAASMLLGAGRKKKEDRIDHSVGIIVEKKLGDSVKKGETIARLFVSDRSDVESALKLLREAYVISDSPSEPPRVVEEVIK
>NZ_CP003409.1|WP_011943677.1|1171137_1172721_-|bifunctional-aspartate-carbamoyltransferase-catalytic-subunit/aspartate-carbamoyltransferase-regulatory-subunit
MKRDFLGRTLAVIEDLSVEEQMFLYEKTRELKQRWYNGEDVSDFRIKKRNVGIYIVFVEPSTRTKESFINAAKFHSGPNVKVNVFDSEHSSFNKQESYTDTFSMLTGYSDYSIFVVRTRLEGVCRLLERRISEFASRNGIEVPSFINAGDGKHEHPTQELLDEYTFLEQNGFDNSFIHVALVGDLLHGRTVHSKVNGLKIFKNVKVDLVAPEELMMPEHYVEKMKKNGFEVRIFSSIREYLSQKDVAKIWYFTRLQLERMGEDILEKVHILREAVTFKKEYLDALPEGVKFYHPLPRHKVYPTIPNFLDTLPLNGWETQARNGYWVRIVLLSMFGGALEAPFDTSKKEEKPEEDFIIPAPITHGSKGVQKEGKRGIKPIENGTVIDHIAKGKTPEEIYSTIVKIRKILRLYDVDSADGIFRSSDGNFKGYISLPDRYLSKREIKKLSAISPNTTVNIIKNSTVVEKYRIKLPPTIYGFEELRCKNENCITNPAHGENASPSFVRDEKGQFICEYCETPHSFEEIWSI
>NZ_CP003409.1|WP_011943678.1|1172756_1173266_-|dihydrofolate-reductase
MAKVIFVLAMDVSGKIASSVEGWNSFEDRKNFREITTEIGNVVMGRVTFEEIGRPLPERLNVVLTRRRRSSNDPSLVFFNGSPGDVVKFLEGKGYEKVAVIGGKTVFTEFLREKLVDELFVTVEPYVFGKGIPFFDEFEGYFPLKLLEMRRLNERGTLFLKYSVEKSHR
>NZ_CP003409.1|WP_011943679.1|1173253_1174660_-|NADPH-dependent-glutamate-synthase
MKNRKTPMKEQSPESRRRNFEEVALGYTLEEAVAEAQRCLQCPTHPCVSGCPVGIDIPGFIRKLREGKLEESYRILKSYNNLPAVCGRVCPQEVQCESRCVVGKMKDSEPVAIGRLERFVADWAAENLEEEVKPLAGSKKEKVAVVGSGPAGLTAAADLAKMGYHVDVFEAFHKPGGVLVYGIPEFRLPKGIVEREVNYIRKLGVNFYLNTVVGKTVKVKELLSEYDAVFIGTGAGTPKFMGIPGTNLNGVYSANEFLTRVNLMKAYLFPEYDTPIRVGKKVAVIGAGNTAMDAARSALRLGAEKVYIVYRRTEREMPARREEYHHALEEGIEFLWLTLPIRYIGDANGNVEAVECVRMELKEADGSGRPRPVPIEGSNFILEVDMVIEAIGQGPNRVLLSEFPGLKLNEHGYIKADEDTGATSVKGVFAGGDIVTGAATVIKAMGAGKKAAQFIHSYLTGEWNPWQK
>NZ_CP003409.1|WP_011943680.1|1174656_1175490_-|sulfide/dihydroorotate-dehydrogenase-like-FAD/NAD-binding-protein
MNEIVKKTKIAEDVFDFWVHSPSVSKEAGPGQFVVIRLHEKGERIPLTVADTRPEKGLFRMVVKVVGKTTHELSLKKEGDTILDVVGPLGNPSEIKNYGNVLLVGGGVGIATLYPIAKALKNVGNNITTVLGARTKDYLIMVDEFKKISDVLLVTDDGSAGMKGVVTDAMDKLFRERKFDICWAVGPTIMMKFCTLKAREFGVPIWVSLNPIMVDGTGMCGACRVTVSGQIKFACVDGPEFRGEEVDWDELLKRLAQYREQEKISYERFLRAAGESE
>NZ_CP003409.1|WP_011943681.1|1175473_1176094_-|ABC-transporter-ATP-binding-protein
MKKSYGKKKVLDGVSFSLEKGKSLGIVGQNSAGKTTLLKILATILKPDEGRLFLFEKDALKDLSYIRKRIAFVPEFPALLEELTVRENLLFFSRLRGVKMESFIVSEFMLEPFMGTLVRNASKGVKQRTALAAALFGNPELLILDEPTSGLDVESASIVRSKLKRLKEEGITVIISSHIREDIEELCDEILVINGESGGSNLERDR
>NZ_CP003409.1|WP_038034678.1|1176111_1176735_-|hypothetical-protein
MSDEKRRKKEELIERIVSEKGEEAFPKLLELLEDEDPEVKEIVSEVFYRLGDRAREFLFNEIQKRRERGFEKNDITNLYIIDILGDLGEKRMKNVLYELMERYDSEEALLIIYEALAKIGEGEVFLPELEYLMFEDAYRKELCEQVAMVLANIPTERSLRILLKALKNKEFSEGQKEFFRRAVEMILYRKPELSKYVTDEERKELGL
>NZ_CP003409.1|WP_038034674.1|1179274_1180423_-|exonuclease-SbcCD-subunit-D
MKELRILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKRGVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAPVVVLPGNHDWKGLKLFGNFITSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDFRFFLESRLNKLYEEALKKEDFAIFMGHFTVEGLSGYAGIEQGREIIINRALIPSVVDYAALGHIHSFREIQKQPLTIYPGSLIKIDFGEEADEKGAVFVELKRGEPPRYERIDVVPLPLKTLYYKKIDTSALKSIRDFCRNFPGYVRVVYEEDFGILPDLMGEIDNLVKIERKSKREIEEVLRESPEEFKEELDKLDYFELFKEYLKKREENHEKLLKILDELLDEVKKSEA
>NZ_CP003409.1|WP_029683603.1|1180424_1180811_-|hypothetical-protein
MKRDIFYVIILTVFAVLFMLTYFSYRNLAVKLTRMEKTLKAYELYIFSDYESFENYVKKEGLKIEGMELLKEKKARSLIAEGKDLFETANYGEALVFFEKALNLSDNEEIKKIASFYLEECRKKLAGD
>NZ_CP003409.1|WP_012896369.1|1180807_1183171_-|endopeptidase-La
MPKKSKDTEKSFKILEKYASQQEKELEIPDSLPCIPLRNGMGVFPNTVVPFYVGRTGSLIALEEAMEKYNRLLLVVNQKDPSVETPEPEDLYKVGTVVKVLQIMKLPDDTFKVLVEGLERAQIEEFVSTDPFFLTKIKILKVKYRKTKKLEALMRSVKDKAVRYFNLTHRFPQETLVTLKEMQDPDKLADFVASILPVPLETKQELLETIHPLERLEKILSILVKEIEILEIEEEIEKKVKDRIEKTQREYVLREKLRAIKEELGAEEELEIKELYEKVEKGDYPDYVKEKAYKEIQRLEKMSPYSAEATVVRTYLDWLLNLPWSAASEDRLDIKEAGKILDKNHYGLEEVKERILEYLVARKFSKNLKAPILCLVGPPGVGKTSLGRTIAEAMGRKFGRMSLGGLRDEAEIKGHRRTYVGALPGRIIQIIRRLGTKNPVILLDEVDKMGISFQGDPASALLEVLDPEQNKDFVDHYLEVPFDLSQVLFITTANVLHTIPPALRDRMEIIEIPGYSDPEKYHIARDYIIPKIAQAYGLSKVMFTPGAIKKIIREYTKEAGVRNLERVIEKVIRKSLVKGEKKSFKITTKDIEELLGPPVFKEEEILEEDTVGAVTGLAWTPVGGSVLIVESLLVPGKGNLILTGNMGDVMKESARIALSVVRKMCGEECREVFEKNDIHIHVPEGAVPKDGPSAGITITVALYSAVTGKKVRRDVAMTGEITLRGKILPVGGIREKLLAAKRAGIKKVILPSRNRPDVEKIPKEYLNGMEIVYCSEIQEVLKEAIVR
>NZ_CP003409.1|WP_012896370.1|1183124_1183610_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MRHLRFKNLTEEQLKRLAKILTGNLKGGEVVILSGNLGAGKTTFVKGMIRAIGLDEKMVKSPTFTLMNVYPGLKTIYHLDLYRLQDSDFLSLDVEDILEDEDGIMVVEWGDLFDGFWPEDSIKVKIEIADESHRNVEILIPEEVNFLAEKIERYRKELQNT

Crispr_ID: NZ_CP003409_7

• CRISPR_ID: NZ_CP003409_7
• CRISPR_location: 1271883-1272251
• CRISPR_type: Orphan
• Repeat_type: III-A
• Spacer_info: 5 spacers

Consensus repeat of NZ_CP003409_7

Consensus_repeat	Method
GTTTCCATACCTCTNAAGGAACTATTGAAAC	CRT
AGTTTCAATAGTTCCTTAGAGGTATGGAAAC	PILER-CR
GTTTCCATACCTCTAAGGAACTATTGAAACT	CRISPRCasFinder

spacers of NZ_CP003409_7

>7.1|1271913|37|NZ_CP003409|CRT
CGAACAGGCAGTTGGTAGACCCCACAGAACGGCGCGT
>7.2|1271980|37|NZ_CP003409|CRT
TGTGCCATTTGCCAATTTCTGCACTTAGATCGAATCC
>7.3|1272047|36|NZ_CP003409|CRT
TCAGCGTGTTCTTCGTGTGTTTCAACTTTTCAACTA
>7.4|1272113|36|NZ_CP003409|CRT
TTGAAGTCTGGGTAGGAGAACCGTACGAAATAATCA
>7.5|1272179|42|NZ_CP003409|CRT
TGTGCCCCCACCATGTATAGCCACGAAATCTTCGTGACACCA
>7.6|1271981|36|NZ_CP003409|PILER-CR,CRISPRCasFinder
GTGCCATTTGCCAATTTCTGCACTTAGATCGAATCC
>7.7|1272048|35|NZ_CP003409|PILER-CR,CRISPRCasFinder
CAGCGTGTTCTTCGTGTGTTTCAACTTTTCAACTA
>7.8|1272114|35|NZ_CP003409|PILER-CR,CRISPRCasFinder
TGAAGTCTGGGTAGGAGAACCGTACGAAATAATCA
>7.9|1272180|41|NZ_CP003409|PILER-CR,CRISPRCasFinder
GTGCCCCCACCATGTATAGCCACGAAATCTTCGTGACACCA

CRISPR arrays and Neighbor proteins around NZ_CP003409_7

CRISPR arrays

The CRISPR arrays of NZ_CP003409_7

>merge|NZ_CP003409|7|1271883-1272251|CRT,PILER-CR,CRISPRCasFinder
GTTTCCATACCTCATAAGGAAGTATTGAAACGAACAGGCAGTTGGTAGACCCCACAGAACGGCGCGTGTTTCCATACCTCTAAGGAACTATTGAAACTGTGCCATTTGCCAATTTCTGCACTTAGATCGAATCCGTTTCCATACCTCTAAGGAACTATTGAAACTCAGCGTGTTCTTCGTGTGTTTCAACTTTTCAACTAGTTTCCATACCTCTAAGGAACTATTGAAACTTGAAGTCTGGGTAGGAGAACCGTACGAAATAATCAGTTTCCATACCTCTAAGGAACTATTGAAACTGTGCCCCCACCATGTATAGCCACGAAATCTTCGTGACACCAGTTTCCATACCTCTAAGGAACTATTGAAACC

>NZ_CP003409|7|7|1271883-1272250|CRT
GTTTCCATACCTCATAAGGAAGTATTGAAA	CGAACAGGCAGTTGGTAGACCCCACAGAACGGCGCGT
GTTTCCATACCTCTAAGGAACTATTGAAAC	TGTGCCATTTGCCAATTTCTGCACTTAGATCGAATCC
GTTTCCATACCTCTAAGGAACTATTGAAAC	TCAGCGTGTTCTTCGTGTGTTTCAACTTTTCAACTA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TTGAAGTCTGGGTAGGAGAACCGTACGAAATAATCA
GTTTCCATACCTCTAAGGAACTATTGAAAC	TGTGCCCCCACCATGTATAGCCACGAAATCTTCGTGACACCA
GTTTCCATACCTCTAAGGAACTATTGAAAC

>NZ_CP003409|7|7|1271950-1272251|PILER-CR
GTTTCCATACCTCTAAGGAACTATTGAAACT	GTGCCATTTGCCAATTTCTGCACTTAGATCGAATCC
GTTTCCATACCTCTAAGGAACTATTGAAACT	CAGCGTGTTCTTCGTGTGTTTCAACTTTTCAACTA
GTTTCCATACCTCTAAGGAACTATTGAAACT	TGAAGTCTGGGTAGGAGAACCGTACGAAATAATCA
GTTTCCATACCTCTAAGGAACTATTGAAACT	GTGCCCCCACCATGTATAGCCACGAAATCTTCGTGACACCA
GTTTCCATACCTCTAAGGAACTATTGAAACC

>NZ_CP003409|7|8|1271950-1272251|CRISPRCasFinder
GTTTCCATACCTCTAAGGAACTATTGAAACT	GTGCCATTTGCCAATTTCTGCACTTAGATCGAATCC
GTTTCCATACCTCTAAGGAACTATTGAAACT	CAGCGTGTTCTTCGTGTGTTTCAACTTTTCAACTA
GTTTCCATACCTCTAAGGAACTATTGAAACT	TGAAGTCTGGGTAGGAGAACCGTACGAAATAATCA
GTTTCCATACCTCTAAGGAACTATTGAAACT	GTGCCCCCACCATGTATAGCCACGAAATCTTCGTGACACCA
GTTTCCATACCTCTAAGGAACTATTGAAACC

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP003409.1|WP_012896425.1|1274853_1275738_+|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl|CDD|235107
NZ_CP003409.1|WP_012311107.1|1277103_1278309_+|aspartate-kinase	unknown	unknown	gnl|CDD|235843
NZ_CP003409.1|WP_012311104.1|1280567_1280978_+|transcriptional-repressor	unknown	unknown	gnl|CDD|223806
NZ_CP003409.1|WP_012311110.1|1273176_1274154_+|aspartate-semialdehyde-dehydrogenase	unknown	unknown	gnl|CDD|237845
NZ_CP003409.1|WP_038034576.1|1265575_1266436_+|flagellar-basal-body-P-ring-formation-protein-FlgA	unknown	unknown	gnl|CDD|224181
NZ_CP003409.1|WP_004081886.1|1272934_1273159_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_012311106.1|1278318_1279479_+|diaminopimelate-decarboxylase	unknown	unknown	gnl|CDD|273415
NZ_CP003409.1|WP_004081933.1|1263001_1264012_+|rod-shape-determining-protein	unknown	unknown	gnl|CDD|237564
NZ_CP003409.1|WP_012311108.1|1275734_1276385_+|4-hydroxy-tetrahydrodipicolinate-reductase	unknown	unknown	gnl|CDD|223366
NZ_CP003409.1|WP_038034573.1|1270082_1270907_-|endoglucanase	unknown	unknown	gnl|CDD|366751
NZ_CP003409.1|WP_011943752.1|1266432_1267032_+|flagellar-L-ring-protein-FlgH	unknown	unknown	gnl|CDD|224974
NZ_CP003409.1|WP_081952600.1|1270903_1271680_-|endoglucanase	unknown	unknown	gnl|CDD|366751
NZ_CP003409.1|WP_012311011.1|1264783_1265569_+|flagellar-basal-body-rod-protein-FlgG	unknown	unknown	gnl|CDD|183687
NZ_CP003409.1|WP_038034575.1|1268305_1269631_-|B12-binding-domain-containing-radical-SAM-protein	unknown	unknown	gnl|CDD|223963
NZ_CP003409.1|WP_012311105.1|1279479_1280553_+|amidohydrolase	unknown	unknown	gnl|CDD|349882
NZ_CP003409.1|WP_011943750.1|1264016_1264766_+|flagellar-basal-body-rod-protein-FlgF	unknown	unknown	gnl|CDD|227125
NZ_CP003409.1|WP_011943753.1|1267042_1268038_+|flagellar-basal-body-P-ring-protein-FlgI	unknown	unknown	gnl|CDD|235399
NZ_CP003409.1|WP_011943765.1|1274158_1274869_+|diaminopimelate-epimerase	unknown	unknown	gnl|CDD|223331
NZ_CP003409.1|WP_010865352.1|1276377_1277088_+|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-acetyltransferase	unknown	unknown	gnl|CDD|132571
NZ_CP003409.1|WP_011943754.1|1268048_1268318_+|hypothetical-protein	unknown	unknown	gnl|CDD|378407

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP003409.1|WP_012896425.1|1274853_1275738_+|4-hydroxy-tetrahydrodipicolinate-synthase	gnl|CDD|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	6.91611e-165
NZ_CP003409.1|WP_012311107.1|1277103_1278309_+|aspartate-kinase	gnl|CDD|235843	PRK06635, PRK06635, aspartate kinase; Reviewed.	0
NZ_CP003409.1|WP_012311104.1|1280567_1280978_+|transcriptional-repressor	gnl|CDD|223806	COG0735, Fur, Fe2+/Zn2+ uptake regulation proteins [Inorganic ion transport and metabolism].	6.20648e-34
NZ_CP003409.1|WP_012311110.1|1273176_1274154_+|aspartate-semialdehyde-dehydrogenase	gnl|CDD|237845	PRK14874, PRK14874, aspartate-semialdehyde dehydrogenase; Provisional.	3.95728e-153
NZ_CP003409.1|WP_038034576.1|1265575_1266436_+|flagellar-basal-body-P-ring-formation-protein-FlgA	gnl|CDD|224181	COG1261, FlgA, Flagellar basal body P-ring biosynthesis protein [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones].	9.72808e-50
NZ_CP003409.1|WP_012311106.1|1278318_1279479_+|diaminopimelate-decarboxylase	gnl|CDD|273415	TIGR01048, Diaminopimelate_decarboxylase, diaminopimelate decarboxylase. This family consists of diaminopimelate decarboxylase, an enzyme which catalyzes the conversion of diaminopimelic acid into lysine during the last step of lysine biosynthesis. [Amino acid biosynthesis, Aspartate family].	0
NZ_CP003409.1|WP_004081933.1|1263001_1264012_+|rod-shape-determining-protein	gnl|CDD|237564	PRK13930, PRK13930, rod shape-determining protein MreB; Provisional.	0
NZ_CP003409.1|WP_012311108.1|1275734_1276385_+|4-hydroxy-tetrahydrodipicolinate-reductase	gnl|CDD|223366	COG0289, DapB, Dihydrodipicolinate reductase [Amino acid transport and metabolism].	9.48176e-91
NZ_CP003409.1|WP_038034573.1|1270082_1270907_-|endoglucanase	gnl|CDD|366751	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12.	5.15493e-27
NZ_CP003409.1|WP_011943752.1|1266432_1267032_+|flagellar-L-ring-protein-FlgH	gnl|CDD|224974	COG2063, FlgH, Flagellar basal body L-ring protein [Cell motility and secretion].	3.68741e-57
NZ_CP003409.1|WP_081952600.1|1270903_1271680_-|endoglucanase	gnl|CDD|366751	pfam01670, Glyco_hydro_12, Glycosyl hydrolase family 12.	1.34312e-74
NZ_CP003409.1|WP_012311011.1|1264783_1265569_+|flagellar-basal-body-rod-protein-FlgG	gnl|CDD|183687	PRK12693, flgG, flagellar basal body rod protein FlgG; Provisional.	1.32045e-145
NZ_CP003409.1|WP_038034575.1|1268305_1269631_-|B12-binding-domain-containing-radical-SAM-protein	gnl|CDD|223963	COG1032, COG1032, Fe-S oxidoreductase [Energy production and conversion].	7.89532e-67
NZ_CP003409.1|WP_012311105.1|1279479_1280553_+|amidohydrolase	gnl|CDD|349882	cd03886, M20_Acy1, M20 Peptidase Aminoacylase 1 family. Peptidase M20 family, Aminoacylase 1 (ACY1; hippuricase; acylase I; amido acid deacylase; IAA-amino acid hydrolase; dehydropeptidase II; N-acyl-L-amino-acid amidohydrolase; EC 3.5.1.14) subfamily. ACY1 is the most abundant of the aminoacylases, a class of zinc binding homodimeric enzymes involved in the hydrolysis of N-acetylated proteins. It is encoded by the aminoacylase 1 gene (Acy1) on chromosome 3p21 that comprises 15 exons. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity; substrates include indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine). ACY1 appears to physically interact with Sphingosine kinase type 1 (SphK1) and may influence its physiological functions; SphK1 and its product sphingosine-1-phosphate have been shown to promote cell growth and inhibit apoptosis of tumor cells. Strong expression of the human gene and its mouse ortholog Acy1 in brain, liver, and kidney, suggest a role of the enzyme in amino acid metabolism of these organs. Defects in ACY1 are the cause of aminoacylase-1 deficiency (ACY1D), resulting in a metabolic disorder manifesting encephalopathy and psychomotor delay.	4.37527e-135
NZ_CP003409.1|WP_011943750.1|1264016_1264766_+|flagellar-basal-body-rod-protein-FlgF	gnl|CDD|227125	COG4786, FlgG, Flagellar basal body rod protein [Cell motility and secretion].	3.8116e-83
NZ_CP003409.1|WP_011943753.1|1267042_1268038_+|flagellar-basal-body-P-ring-protein-FlgI	gnl|CDD|235399	PRK05303, flgI, flagellar basal body P-ring protein FlgI.	5.44187e-153
NZ_CP003409.1|WP_011943765.1|1274158_1274869_+|diaminopimelate-epimerase	gnl|CDD|223331	COG0253, DapF, Diaminopimelate epimerase [Amino acid transport and metabolism].	1.96771e-70
NZ_CP003409.1|WP_010865352.1|1276377_1277088_+|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-acetyltransferase	gnl|CDD|132571	TIGR03532, DapD_Ac, 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. This enzyme is part of the diaminopimelate pathway of lysine biosynthesis. Alternate name: tetrahydrodipicolinate N-acetyltransferase. Note that IUBMB lists this alternate name as the accepted name. Unfortunately, the related succinyl transferase acting on the same substrate (EC:2.3.1.117, TIGR00695) uses the opposite standard. We have decided to give these two enzymes names which more clearly indicated that they act on the same substrate.	4.10628e-120
NZ_CP003409.1|WP_011943754.1|1268048_1268318_+|hypothetical-protein	gnl|CDD|378407	pfam10135, Rod-binding, Rod binding protein. Members of this family are involved in the assembly of the prokaryotic flagellar rod.	3.12866e-07

Protein sequences

>NZ_CP003409.1|WP_081952600.1|1270903_1271680_-|endoglucanase
MVVLMTKPGTSDFVWNGIPLSMELNLWNIKEYSGSVAMKFDGEKITFDADIQNLSPKEPERYILGYPEFYYGYKPWENHTAEGSKLPVPVSSMKSFSVEVSFDIHHEPSLPLNFAMETWLTREKYQTEASIGDVEIMVWFYFNNLTPGGEKIEEFTIPFVLNGESVEGTWELWHAEWGWDYLAFRLKDPVKKGRVKFDVRHFLDAAGKALSSSARVKDFEDLYFTVWEIGTEFGSPETKSAQFGWKFENFSIDLEVRE
>NZ_CP003409.1|WP_038034573.1|1270082_1270907_-|endoglucanase
MRWAVLLMVVFSALLFSSEVVLTSVGATDISFNGFPVTMELNFWNVKSYEGETWLKFDGEKVEFYADLYNIVLQNPDSWVHGYPEIYYGYKPWAGHNSGVEFLPVRVKDLPDFYVTLDYSIWYENNLPINLAMETWITKSPDQTSVSSGDAEIMVWFYNNVLMPGGQKVDEFTTTVEINGVKQETKWDVYFAPWGWDYLAFRLTTPMKEGKVKINVKDFVQKAAEVVKKHSTRIDNFEELYFCVWEIGTEFGDPNTTTAKFGWTFRDFSVEVVK
>NZ_CP003409.1|WP_038034575.1|1268305_1269631_-|B12-binding-domain-containing-radical-SAM-protein
MRVLLINPYSGGYYYRLGAVYPPLGLMYISSSLKRKGHSVALIDMNVEKFDLERFNFRDYDVVGISADTVRFPVVERIAEKAKAQNVTVVMGGPHTTACYHEILQKGLCDYVVLGEGERAFSDLVESIASSEKYPLIPGVAYMKDGEVIALPSRFLENLDDLPFPDREKVHLYRTKFAGERATSLITSRGCPFNCEFCSASQFIGRRIRWRSIENVIDELKILKKLGYGSVIFFDDNFTINPKRVVNLCEEMMRKDLRFKWWAFSRADELLGREDMVEAMSKAGCRMLFIGFESANDEVLEEYGKNLKSDIAFDVMNLLKKYKIDVFASFVIGALKDTRKTIEKTVKLAKKLKASIVQFSILTPYPGTVLFEKLKHLIFEKDWRKFDGTHLVFKHPNFSPKELRRLFIKAYYAVYTSPRLIFRRGIPFLVRLLSHREAYSL
>NZ_CP003409.1|WP_011943754.1|1268048_1268318_+|hypothetical-protein
MFVYGVSSNIKNLRDASIEFVSDLFYRIFKEMYESIPKYDLVPETTAEKWFKEMLLQEYSKHAAEQSPLADMVMKSLGGKKISSLPQRE
>NZ_CP003409.1|WP_011943753.1|1267042_1268038_+|flagellar-basal-body-P-ring-protein-FlgI
MKKRLAVLLVIVLTITFSFSVTTRIKDIAFFRGARDNQLFGIGLVVGLNGTGDSGNVNSPLLLEMMKKFGVQVSENDLKSKNTALVMVLADIPPFAKEGMRIDCVVASIADAKSLAGGYLLQTPLYGADGKVYAVAQGSVIIGGEDVKLSSNLQKRYRVVGYLPEGAIVERDIPSDMLDGDSVTILLRQPDITTAARVARAINEKFEMDLAKAIDPSAIKLTVPNAFQDDLITFLSLVEEIEVQPDVPARIVVNERTGTVLFGGDVKLSDFVISYGNFTISVTGGKIGDKDATISNLVSALKAAGATPQDIIAILQVIYESGYITGELIIM
>NZ_CP003409.1|WP_011943752.1|1266432_1267032_+|flagellar-L-ring-protein-FlgH
MKKISIVLLIVFVTSIFPFSIWNSAGESEYKNLLSIQKASKVGDILTIVIRESNNVSSERESLEIQKTLLNILGNVVNAAAGVNLNNFIPINNNSPERQRGGKVQSSVVAKISAVVVDIDPYGNLVVEGRKTIKVDKDYQEIIVKGKVRPDDIEIGNEVDSSKLADSEIWVNGKLVFSEEPGKESFFDKILAFLAGLFT
>NZ_CP003409.1|WP_038034576.1|1265575_1266436_+|flagellar-basal-body-P-ring-formation-protein-FlgA
MKVLLVLMVLISSFLFSETLTLKETLLASPGVLFLDDITIEKVESEKSLMILLPGLEYLVTRDLLRTKFPEYDFTGPESVRITVEGSSSLKNTVFEEIGKKAETEDFEAFVVKTFGTLPEKFEPQTIRVTKISKNLFSVFLRFPETYVTLNMLLRKERNVVVLKRNINVGDVIKEEDVRLEKKNVFEIYGEPFFDVSEVVGKISRRYLKEGTVLTADMVKDPPDVVKGQVVPAYVDMGSIKVTTFVEVLENGYLGETVRAMNVESRKYVFGRVERGPVLRILEVVE
>NZ_CP003409.1|WP_012311011.1|1264783_1265569_+|flagellar-basal-body-rod-protein-FlgG
MMISLYSAATGMSAQQFKLDTIANNLANVDTTGYKKVRAEFQDLLYQYVKNAGTPTAATSSLPTGLYVGHGVRTAATTRIFTLGNFEQTGNALDLAIAGDGFFQIQLQDGRIAYTRDGSFKIDSEGRIVTSNGLLLVPEITIPENAVSINVSPDGIVSAELQDGTIQELGTITLVRFVNPSGLKSIGDNLYIATPASGDPIEGVPGQDGFGAIKQGFLEKSNVDVVREMVDMITAQRAYEFNSRVIQTADEMLRTATNVKR
>NZ_CP003409.1|WP_011943750.1|1264016_1264766_+|flagellar-basal-body-rod-protein-FlgF
MTRGIYNAAMGMLVDMAKLDRIANDLANVDTAGYKQDREAFRAYLRREVFRQEPDPVESRTKKVPIGPLEYATVLDEVRTDLSQGPVEKTDVPYHLAINGEGFFRIEFNGGEYYTRNGEFTVNSEGYIVTNYGGYLLDENGERVRFFDDFTVDEEGYVRDAYGNIVTRIGVYNLENPEKFGNTLFTGENPSPSENFRIMQGYVEKSNVDALKAMVDMISAMRHYELSQRAVTVNDELNGKLINSLASLK
>NZ_CP003409.1|WP_004081933.1|1263001_1264012_+|rod-shape-determining-protein
MPRGDIGIDLGTASIIVYKRGEGIVLHEPSVVAISEKTGEIVAIGEEAKKMLGKTPEGLKAIRPMKDGVIADYRMIEAIIRNFLKKIIGRFSFVKPSLIIGVPTKITEVEKRAVFEAGLNAGARRVHIVSEPIAAAIGAGIDVMASEGNMVVDIGGGTTDIAVISLGGTVVGESVRMAGDAMDEAIVKFIRKKYGLIIGESTAEEIKKRIGKTHPAFENYEIEIKGRDVVTGLPRTDRVSSEDVREAIEPIIFALLTKLKNVLERTPPELSADIINNGIRLTGGGALLRGLDRTIYDEIHVKTIVADDPITCVARGTGILLEDEKLLKTVCETYSR
>NZ_CP003409.1|WP_004081886.1|1272934_1273159_+|hypothetical-protein
MSRLSHQGRNRGRLKGEGAEGCRVPPALHAWGYGEYPYHCHGGLSVESRSGLESEKDFRPDLASLRGAKRRFFY
>NZ_CP003409.1|WP_012311110.1|1273176_1274154_+|aspartate-semialdehyde-dehydrogenase
MKVGVVGATGEVGRTMVKVLEEFNVPVTELRLFASERSVGKEIEFKGEKFKVELLTEESMKWKCDYLLFSAGASVSRKFAPIAAENGVTVIDNSSAFRMEKEIPLVVPEVNAHLLKGYTGIIANPNCSTIQMILSIYKLHEVYGIEEIFVSTYQSVSGAGHKGIEELLAQERGENVMKVFPKPIHRNVIPLIGDIQENLFSQEEMKMVNETRKILNDYSIRVYPTTVRVPVLYGHSEAIMVRFKKPYESLEKVREVIASGEDVVVTDDLITPVDVAGKNETYVCRLRAADERSILFWNVADNIRVGAATNAVRILLKHAEMNGKV
>NZ_CP003409.1|WP_011943765.1|1274158_1274869_+|diaminopimelate-epimerase
MCYSANGNTFLIVDNTQKRIPEEKKPDFVRENVGDLDGVIFVELVDGKYFMDYYNRDGSMAAFCGNGARAFSQYLIDRGWIKEKEFTFLSRAGEIKVIVDDSIWVRMPGVSEKKEMKVDDYEGYFVVVGVPHFVMEVKGIDELDVEKLGRDLRYKTGANVDFYEVLPDRLKVRTYERGVERETKACGTGVTSVFAVYRDKTGAKEVKIQVPGGTLFLKEENGEIFLRGDVKRCSEE
>NZ_CP003409.1|WP_012896425.1|1274853_1275738_+|4-hydroxy-tetrahydrodipicolinate-synthase
MFRGVGTAIVTPFKNGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIKEANPDIDQIDRTVSLTKQARSDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSREVHRKLRPLMKALFAETNPIPVKAALNLMGFIENELRLPLVPASEKTVELLRNVLKESGLL
>NZ_CP003409.1|WP_012311108.1|1275734_1276385_+|4-hydroxy-tetrahydrodipicolinate-reductase
MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEELGSPDVVVDFSSPEALPKTVELCKKYRAGLVLGTTALKEEHLQMLRELSKEVPVVQAYNFSIGINVLKRFLSELVKVLEDWDVEIVETHHRFKKDAPSGTAILLESALGKSVPIHSLRVGGVPGDHVVVFGNIGETIEIKHRAISRTVFAIGALKAAEFLVGKDPGMYSFEEVIFGGE
>NZ_CP003409.1|WP_010865352.1|1276377_1277088_+|2,3,4,5-tetrahydropyridine-2,6-dicarboxylate-N-acetyltransferase
MSELDAREIIEMIAKAKKKTPIVAYIKGDLAGIDFSSFKFFGDERFGILFGEYEDFKKLLEEHREKIEDYHLEVKARNSALPLADLTKYKARIEPGAIIRDMVEIGEGAVIMMGAVINVGAVIGEGTMIDMNAVVGGRAIIGKKCHIGAGAVIAGVIEPPSAKPVVIEDEVLVGANAVILEGVTVGKGAVVAAGAVVTKDVPPYTVVAGVPARVIKQIDEKTKEKTKIVDELRNLE
>NZ_CP003409.1|WP_012311107.1|1277103_1278309_+|aspartate-kinase
MNVVVQKYGGSSVATPERIKNVAQRIKKKVDEGYKVVVVVSAMGKTTDNLIKLAKEISPRPDSRELDMLLATGEQVSAALLSMALKDFGVKAKSLNAFQVKIKTTPHHTSARIVDIDDSVIRENLKDYDVLVVTGFQGVNEHGDLTTLGRGGSDTSAVALAAKLRVPCEIYSDVDGIYTCDPRVHPRAKKLAYITYDEALELTALGAKVLHSRSVEIAKKYGIPIYCASSFTEEEGTMVVERLPEWLEEPVVTGATISHGQIKVSISFLPKDVKYITAIFEEVGKRALNVDMISLVPSNGKVFLSFTILEDHKEDLDEALKEALRDVEGWKSTYEGGFAKLSIVGVGMRTSPGVAARFFEALERAGVTPELVTTSEIKISCLVPEEKAEKALKSVIEEFEL
>NZ_CP003409.1|WP_012311106.1|1278318_1279479_+|diaminopimelate-decarboxylase
MDILRKVAEIHGTPTYVYFEETLRKRSRLVKEVFEGVNLLPTFAVKANNNPVLLRILREEGFGMDVVTKGELLAAKLAGVPSRSIVWNGNGKSRDQMEYFLREDVRIINVDSFEEMEIWKELNPEGVEYFIRVNPEVDAKTHPHISTGLKKHKFGIPLEDLDSFMERFGSMNIRGLHVHIGSQITRVEPFVEAFNKVVRASERYGFEEINIGGGWGINYSGEELDLSSYREKVVPALKRFKRVIIEIGRYIVAPSGYLLLRVVLVKRRHNKAFVVVDGGMNALIRPALYSAYHRIFVLGKQGKEMRADVVGPLCESGDVIAYDRELPEVEPGDIIAVENAGAYGYTMSNNYNSTTRPAEVLVGENGRISLIRRRETEMDIFKDVVM
>NZ_CP003409.1|WP_012311105.1|1279479_1280553_+|amidohydrolase
MNEIELRHILHMNPELSFKEYNTKETLRRAVIEIGYDKIIEVAGTGLVIEKKETEDPYVVLRADMDALPIKEETGWEFASRNEYMHACGHDFHMSALYGAMKRLRNVKKNFLFVFQPAEETGGGAKKVVDFLRYRYEIKAAVGFHVTDEYDAGTVASRPGVLFASATEFDVYFKGVPAHVAFAEKGKDALKTAVSFLGWLYNKKWNALVGVGKISGGRARNIVPDEIKLEGTIRSEALRITEEVISDMVKQLGELKEETGVGFAVERGSVYPEVRVNQNLFETLRATCQRLGFSFVECDMKWTGEDFGYFSQVFPSLSFWFGVGEGERFGLHHPRFLPNDRYIPMAADLLAELAMVI
>NZ_CP003409.1|WP_012311104.1|1280567_1280978_+|transcriptional-repressor
MTTDEIIERLKSKKVKLTTQRMEIIKFVSEMKEGHFEAKEIFAVLSKKIPSLSIATLYSVLYLLVDLGVIYAFSDGQKTIFDFNPEPHGHFICRECGKIEDVEIRELKLGEIKGKREKIELVIKGVCEECLKKVKD

Crispr_ID: NZ_CP003409_8

• CRISPR_ID: NZ_CP003409_8
• CRISPR_location: 1364282-1364643
• CRISPR_type: Orphan
• Repeat_type: III-A
• Spacer_info: 5 spacers

Consensus repeat of NZ_CP003409_8

Consensus_repeat	Method
GTTTCAATAATTCCTTAGAGGTATGGAAAC	PILER-CR
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CRISPRCasFinder
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CRT

spacers of NZ_CP003409_8

>8.1|1364312|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CGGAATACGTTATGTCTAGTACCGACGCTATACCGC
>8.2|1364378|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
AATATTTCTCACCTTCCTTTTCAACAACCGATATGTC
>8.3|1364445|37|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CTCGAGCTGTTCTGATACCACTTCTTTCTTATCTCTC
>8.4|1364512|36|NZ_CP003409|PILER-CR,CRISPRCasFinder,CRT
CTACTTCGCAGCCGTGTATGGTAGAAAGCCGCAGCG
>8.5|1364578|36|NZ_CP003409|CRISPRCasFinder,CRT
ATTCCGACGCCGGAGACATACCAATCGTGGTACATC

CRISPR arrays and Neighbor proteins around NZ_CP003409_8

CRISPR arrays

The CRISPR arrays of NZ_CP003409_8

>merge|NZ_CP003409|8|1364282-1364643|PILER-CR,CRISPRCasFinder,CRT
GTTTCAATAATTCCTTAGAGGTATGGAAACCGGAATACGTTATGTCTAGTACCGACGCTATACCGCGTTTCAATAATTCCTTAGAGGTATGGAAACAATATTTCTCACCTTCCTTTTCAACAACCGATATGTCGTTTCAATAATTCCTTAGAGGTATGGAAACCTCGAGCTGTTCTGATACCACTTCTTTCTTATCTCTCGTTTCAATAATTCCTTAGAGGTATGGAAACCTACTTCGCAGCCGTGTATGGTAGAAAGCCGCAGCGGTTTCAATAATTCCTTAGAGGTATGGAAACATTCCGACGCCGGAGACATACCAATCGTGGTACATCGTTTCAATACATCCTTAGAAGCACAAAAAA

>NZ_CP003409|8|8|1364282-1364577|PILER-CR
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CGGAATACGTTATGTCTAGTACCGACGCTATACCGC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AATATTTCTCACCTTCCTTTTCAACAACCGATATGTC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTCGAGCTGTTCTGATACCACTTCTTTCTTATCTCTC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTACTTCGCAGCCGTGTATGGTAGAAAGCCGCAGCG
GTTTCAATAATTCCTTAGAGGTATGGAAAC

>NZ_CP003409|8|9|1364282-1364643|CRISPRCasFinder
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CGGAATACGTTATGTCTAGTACCGACGCTATACCGC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AATATTTCTCACCTTCCTTTTCAACAACCGATATGTC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTCGAGCTGTTCTGATACCACTTCTTTCTTATCTCTC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTACTTCGCAGCCGTGTATGGTAGAAAGCCGCAGCG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	ATTCCGACGCCGGAGACATACCAATCGTGGTACATC
GTTTCAATACATCCTTAGAAGCACAAAAAA

>NZ_CP003409|8|8|1364282-1364643|CRT
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CGGAATACGTTATGTCTAGTACCGACGCTATACCGC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	AATATTTCTCACCTTCCTTTTCAACAACCGATATGTC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTCGAGCTGTTCTGATACCACTTCTTTCTTATCTCTC
GTTTCAATAATTCCTTAGAGGTATGGAAAC	CTACTTCGCAGCCGTGTATGGTAGAAAGCCGCAGCG
GTTTCAATAATTCCTTAGAGGTATGGAAAC	ATTCCGACGCCGGAGACATACCAATCGTGGTACATC
GTTTCAATACATCCTTAGAAGCACAAAAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP003409.1|WP_128080970.1|1366650_1366803_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_039446229.1|1361641_1362412_+|inositol-monophosphatase	unknown	unknown	gnl|CDD|223559
NZ_CP003409.1|WP_038034465.1|1365530_1366514_-|ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|213232
NZ_CP003409.1|WP_038034495.1|1359150_1359768_+|CDP-alcohol-phosphatidyltransferase-family-protein	unknown	unknown	gnl|CDD|223632
NZ_CP003409.1|WP_012896473.1|1356748_1356976_-|hypothetical-protein	unknown	unknown	gnl|CDD|224817
NZ_CP003409.1|WP_012311126.1|1373723_1374776_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP003409.1|WP_038034493.1|1362413_1363712_+|glycoside-hydrolase-family-32-protein	unknown	unknown	gnl|CDD|224536
NZ_CP003409.1|WP_038034462.1|1367709_1368864_-|alanine--glyoxylate-aminotransferase-family-protein	unknown	unknown	gnl|CDD|223153
NZ_CP003409.1|WP_012311055.1|1360528_1361485_+|SufD-family-Fe-S-cluster-assembly-protein	unknown	unknown	gnl|CDD|223791
NZ_CP003409.1|WP_038034463.1|1366783_1367704_-|3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl|CDD|240628
NZ_CP003409.1|WP_038034467.1|1364755_1365526_-|ABC-transporter-permease	unknown	unknown	gnl|CDD|130314
NZ_CP003409.1|WP_038034460.1|1369069_1369627_+|ribosome-recycling-factor	unknown	unknown	gnl|CDD|178850
NZ_CP003409.1|WP_011943842.1|1353566_1354052_-|NADH-quinone-oxidoreductase-subunit-NuoE	unknown	unknown	gnl|CDD|376507
NZ_CP003409.1|WP_011943844.1|1355190_1356756_-|4Fe-4S-binding-protein	unknown	unknown	gnl|CDD|226972
NZ_CP003409.1|WP_038034497.1|1357243_1358392_+|inositol-3-phosphate-synthase	unknown	unknown	gnl|CDD|224180
NZ_CP003409.1|WP_038034457.1|1370316_1371129_+|phosphatidate-cytidylyltransferase	unknown	unknown	gnl|CDD|366491
NZ_CP003409.1|WP_029683704.1|1354064_1355204_-|SpoIIE-family-protein-phosphatase	unknown	unknown	gnl|CDD|369272
NZ_CP003409.1|WP_011943862.1|1374731_1375604_-|Hsp33-family-molecular-chaperone-HslO	unknown	unknown	gnl|CDD|224200
NZ_CP003409.1|WP_038034455.1|1371125_1373717_+|alanine--tRNA-ligase	unknown	unknown	gnl|CDD|234701
NZ_CP003409.1|WP_012311056.1|1359800_1360532_+|ABC-transporter-ATP-binding-protein	unknown	unknown	gnl|CDD|223473

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP003409.1|WP_038034462.1|1367709_1368864_-|alanine--glyoxylate-aminotransferase-family-protein	gnl|CDD|223153	COG0075, COG0075, Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism].	0
NZ_CP003409.1|WP_039446229.1|1361641_1362412_+|inositol-monophosphatase	gnl|CDD|223559	COG0483, SuhB, Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family [Carbohydrate transport and metabolism].	2.91486e-88
NZ_CP003409.1|WP_038034465.1|1365530_1366514_-|ATP-binding-cassette-domain-containing-protein	gnl|CDD|213232	cd03265, ABC_DrrA, Daunorubicin/doxorubicin resistance ATP-binding protein. DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.	5.64763e-150
NZ_CP003409.1|WP_038034495.1|1359150_1359768_+|CDP-alcohol-phosphatidyltransferase-family-protein	gnl|CDD|223632	COG0558, PgsA, Phosphatidylglycerophosphate synthase [Lipid metabolism].	5.16123e-17
NZ_CP003409.1|WP_012896473.1|1356748_1356976_-|hypothetical-protein	gnl|CDD|224817	COG1905, NuoE, NADH:ubiquinone oxidoreductase 24 kD subunit [Energy production and conversion].	2.00028e-23
NZ_CP003409.1|WP_038034493.1|1362413_1363712_+|glycoside-hydrolase-family-32-protein	gnl|CDD|224536	COG1621, SacC, Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism].	7.8654e-166
NZ_CP003409.1|WP_012311055.1|1360528_1361485_+|SufD-family-Fe-S-cluster-assembly-protein	gnl|CDD|223791	COG0719, SufB, Cysteine desulfurase activator SufB [Posttranslational modification, protein turnover, chaperones].	3.55762e-69
NZ_CP003409.1|WP_038034463.1|1366783_1367704_-|3-phosphoglycerate-dehydrogenase	gnl|CDD|240628	cd05303, PGDH_2, Phosphoglycerate dehydrogenase (PGDH) NAD-binding and catalytic domains. Phosphoglycerate dehydrogenase (PGDH) catalyzes the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDH comes in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence.	2.2809e-158
NZ_CP003409.1|WP_038034467.1|1364755_1365526_-|ABC-transporter-permease	gnl|CDD|130314	TIGR01247, drrB, daunorubicin resistance ABC transporter membrane protein. This model describes daunorubicin resistance ABC transporter, membrane associated protein in bacteria and archaea. The protein associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc. [Transport and binding proteins, Other].	3.93492e-87
NZ_CP003409.1|WP_038034460.1|1369069_1369627_+|ribosome-recycling-factor	gnl|CDD|178850	PRK00083, frr, ribosome recycling factor; Reviewed.	2.76762e-90
NZ_CP003409.1|WP_011943842.1|1353566_1354052_-|NADH-quinone-oxidoreductase-subunit-NuoE	gnl|CDD|376507	pfam01257, 2Fe-2S_thioredx, Thioredoxin-like [2Fe-2S] ferredoxin.	4.41759e-76
NZ_CP003409.1|WP_011943844.1|1355190_1356756_-|4Fe-4S-binding-protein	gnl|CDD|226972	COG4624, COG4624, Iron only hydrogenase large subunit, C-terminal domain [General function prediction only].	2.23416e-97
NZ_CP003409.1|WP_038034497.1|1357243_1358392_+|inositol-3-phosphate-synthase	gnl|CDD|224180	COG1260, INO1, Myo-inositol-1-phosphate synthase [Lipid metabolism].	2.59066e-156
NZ_CP003409.1|WP_038034457.1|1370316_1371129_+|phosphatidate-cytidylyltransferase	gnl|CDD|366491	pfam01148, CTP_transf_1, Cytidylyltransferase family. The members of this family are integral membrane protein cytidylyltransferases. The family includes phosphatidate cytidylyltransferase EC:2.7.7.41 as well as Sec59 from yeast. Sec59 is a dolichol kinase EC:2.7.1.108.	4.99573e-63
NZ_CP003409.1|WP_029683704.1|1354064_1355204_-|SpoIIE-family-protein-phosphatase	gnl|CDD|369272	pfam07228, SpoIIE, Stage II sporulation protein E (SpoIIE). This family contains a number of bacterial stage II sporulation E proteins (EC:3.1.3.16). These are required for formation of a normal polar septum during sporulation. The N-terminal region is hydrophobic and is expected to contain up to 12 membrane-spanning segments.	4.07301e-08
NZ_CP003409.1|WP_011943862.1|1374731_1375604_-|Hsp33-family-molecular-chaperone-HslO	gnl|CDD|224200	COG1281, COG1281, Disulfide bond chaperones of the HSP33 family [Posttranslational modification, protein turnover, chaperones].	9.63655e-115
NZ_CP003409.1|WP_038034455.1|1371125_1373717_+|alanine--tRNA-ligase	gnl|CDD|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	0
NZ_CP003409.1|WP_012311056.1|1359800_1360532_+|ABC-transporter-ATP-binding-protein	gnl|CDD|223473	COG0396, sufC, Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones].	2.23417e-97

Protein sequences

>NZ_CP003409.1|WP_038034493.1|1362413_1363712_+|glycoside-hydrolase-family-32-protein
MFKPNYHFFPITGWMNDPNGLIFWKGKYHMFYQYNPRKPEWGNICWGHAVSDDLVHWKHLPVALYPDDETHGVFSGSAVEKDGKMFLVYTYYRDPAHNKGEKETQCVAMSENGLDFVKYDGNPVISKPPEEGTHAFRDPKVNRSNGKWRMVLGSGKDEKIGRVLLYTSDDLFHWKYEGVIFEDGTTKEIECPDLVRIGEKDILIYSITSTNSVLFSMGELKEGKLNVEKRGLLDHGTDFYAAQTFFGTDRVVVIGWLQSWLRTGLYPTKREGWNGVMSLPRELYVENNELKVKPVDELLALRKRKVFETAKSGTFSLDVGDNSYEIVCEFGGEIELRMGNESEEVVITKSRDELIVDTTRSGVSGGEVRKATVEDEATNRIRAFLDSCSVEIFFNDSIAFSFRIHPEKVYNVLTVKSNQVKFEVFELENIWL
>NZ_CP003409.1|WP_039446229.1|1361641_1362412_+|inositol-monophosphatase
MDRLDFSIKLLRKVGHLLMIHWGRVDNVEKKTGFKDIVTEIDREAQRMIVDEIRKFFPDENIMAEEGIFEKGDRLWIIDPIDGTINFVHGLPNFSISLAYVENGEVKMGVVHAPALNETLYAEEGSGAFFNGERIRVSENASLEECVGSTGSYVDFTGKFIERMEKRTRRIRILGSAALNAAYVGAGRVDFFVAWRINPWDIAAGLIIVKEAGGMVTDFSGKEANAFSKNFIFSNGLIHDEVLKVVNEVVEEIGGK
>NZ_CP003409.1|WP_012311055.1|1360528_1361485_+|SufD-family-Fe-S-cluster-assembly-protein
MIVKDYRKEFETLAKAYEKAGGDVSKFLDRRIASIIISGDKVIGLNGVEGVELTPHRIENGVQVDMRIKEGVVVEYPVHVCTGYLEKKGLQRVVFNIRLEKNAKAIFVAHCVFPWTEDFTHDALMNVELEEGAWMEYHDEHMHSETGSINLITRSIARVGEGAVYRNTFTLVKTRIGTLRVFMDASLEKDAVGELYTKVKAIEDDDVEVKEILRLNGMGARGLAKTNAVAIDRAKVSVVNEVYGNAPHTRGHVECLEIAKGDGVDVRALPVLVVKNDSSELTHEASIGRVNAKQLETLMAKGLTEEEATEMIIKGILT
>NZ_CP003409.1|WP_012311056.1|1359800_1360532_+|ABC-transporter-ATP-binding-protein
MLELIDVWYEVEGKAILKGINARFEKQRVYSILGTNGAGKSTLAYLIMGLEGYRPTRGKILLDGEDITDLSVTERAKRGITLMWQEPARFTGIKIRDYLTLGGRRKVSKEELERVLELVGLNSALYLERNVDEKLSGGERKRVELASILLMKPRYTILDEPDSGIDIMSLEMIEKVLSELVNAGGSVILVTHREEIALESDYAFLICHGSILKEGNPSEIVQFYKNSCDRCDHPNEPSGEMIV
>NZ_CP003409.1|WP_038034495.1|1359150_1359768_+|CDP-alcohol-phosphatidyltransferase-family-protein
MLRKSTDGWISSLTNRRFSSRITNLILEKNWQITPNQMSFISFLVGVLAFPFYLLKVPWIAGILVQVSSVLDGVDGELARARNVSSNWGAFFDTMLDRFVDILAVLGLSLYGYLKDGPSLSLLFWSVLAVSGSLMVSYLHSVGKVFGTHPALVGKLSGFASRDVRLFVVFVFSLFGMYLPALVVISILSYVYTTGKFVELLVLNR
>NZ_CP003409.1|WP_038034497.1|1357243_1358392_+|inositol-3-phosphate-synthase
MVKVLILGQGYVASTFVAGLEKLRKGEIEPYGVPLARELPIDFKDIKIVGSYDVDRAKIGKKLSEVVKQYWNDVDSLTSDPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTLVKEWTELDPDVIVNTCTAEAFIPFGNKEDLLKAIENNDKERLTATQVYAYAAALYANKRGGAAFVNVIPTFIANDPAFVELAKENNLVVFGDDGATGATPFTADVLSHLAQRNRYVKDVAQFNIGGNMDFLALTDDGKNKSKEFTKSSIVKDILGYDAPHYIKPTGYLEPLGDKKFIAIHIEYMSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRKEFGTVYPVNAFYMKNPGPAEEKNIPRIIAYEKMRIWAGLKPKWL
>NZ_CP003409.1|WP_012896473.1|1356748_1356976_-|hypothetical-protein
MIVRVCMGSSCHLKGSYEVVRRFQELQKKYNFKLYGSLCFGNCSQGVCVEIDGQLFSRVTPENAEEILKRVLQNG
>NZ_CP003409.1|WP_011943844.1|1355190_1356756_-|4Fe-4S-binding-protein
MAELIFSRETDCRYCYKCLRNCPVKAISFKSGKSTVLEEECVFCGLCLDICPQNARSYRKDVGRFLSLSRPFLVSIAPSFFAYFENPLRVIGILKEMGAVVVQETAVGAEIVSRRYEEVFEKHPGPLITTACPVVVNLAEKHFPNVLKYFAPVDSPLMAHAKFLKTRYGDFPIVFVGPCIAKKSESDLVDVALTFEELEEILEEREGKEALPDGPYPDRARFYPTTDGIGYTVSVPWEKKLVVEGIENLMRVFSRIDEYKSVFIEASACYGSCLNGPVMKKKSNGKERLLEWQKKLPKEPKVNHLKIDTFRSYRNKSRNVEVPEEEIKKVLVSIGKDDPSKELNCGACGYDSCREKARAVVLGKAEKEMCFVYLLDLVKSSSYRVVEESPNAVFVLKDEKVIYRNRVAGELIQKDPGILECAKGSVGETLNIEGKRFFFVKEFSLEDGEEVIMLVDITQEKLKDEELDKVKKETLRKVEEMLNKQMRIAQEIAGILGESIAETKSSFMELKRFMEGENADL
>NZ_CP003409.1|WP_029683704.1|1354064_1355204_-|SpoIIE-family-protein-phosphatase
MLTCDVFFASKNKKGEEVCGDSIKVKRESEKIVVSISDGLGSGIKASILSTLTSTIASTMLIKGLPVADVFRTILATLPICRVRKISYSNLCSVVCDFKNNTCTVVEYEFPVVMLFKGERRVFPEKLELEIEGKKVFVWQFQPEAGTLLFLATDGLSQAGMGTDLFPLGFGVENIEKEMKHLLKNHVSPENIVRHFVKLAEKLDQEVRGDDTLVACLNFREKRILNLFVGPPEDRKKDEEYVKAFLSLPGKKIVCGGTTGQIFERVTGKKVEIDLYTLSENSPPVGYMEGIDLMTEGIVTLTQVFRYLEGQSDELGYGAKFIVKSLLEADEINFFVGRAINPAHQNPLFSHDISLKFRLVKDIAQILRERGKIVNVQYC
>NZ_CP003409.1|WP_011943842.1|1353566_1354052_-|NADH-quinone-oxidoreductase-subunit-NuoE
MERHFEKVEEILKKYGYKRENLIKILLEIQEIYRYLPEDVINYVSTAMGIPPAKIYGVATFYAQFSLKPKGKYAIMVCDGTACHMAGSPEVLKAIEEETGLTPGNVTEDLMFSLDQVGCLGACALAPVMVINGEVYGNLTADKVKEILRKIKEKERESANV
>NZ_CP003409.1|WP_038034467.1|1364755_1365526_-|ABC-transporter-permease
MAAFVTMIYRQFMRFLRSRSRVIGMIINPLIWIIFFGLGWSKVFDNPWAKMMFGGVDYLTYLAPGIFAMTVFNMSFISGVSLIWDKQFGFFKEVLVAPSSRRLSITGRIVGDAIVTVLQGLIILVFNYFLAESLKISGLLPALAVGFLMSVTIASFGIALALKMESTEGFQMIMMALMMPLVFLSGAMYPIDSMPNWMKALAYINPLTYAVDASRGYLVGEKVMKFSFGLDWGILSILMLVGLILAMESFERARIS
>NZ_CP003409.1|WP_038034465.1|1365530_1366514_-|ATP-binding-cassette-domain-containing-protein
MEDIIVVENLVKKFGDFEAVKGVSFSVKKGEVFAFLGPNGAGKTTTIHMLTTLLKPTSGKAWVAGHDVLKEPREVRRKIGIVFQDQSLDRELTAYENMYIHGKIYGYGGEKLKKRILELLEFVELLEFKDKPVKTFSGGMARRLEIARSLIHEPEVLFLDEPTIGLDPHTRAHMWEYISKMKKEHNMTIFLTTHYMDEAEQLADRVAIIDHGKIIALGTPTELKRMVGKEIIYVRFSEAVECLEGEFIESCKKLPDGRLELNVEDSGRAIPKIFELAQQKGLKIEEITYHKPTLNDVFLHLTGRELREEGPENSFKTMARMRMRMRR
>NZ_CP003409.1|WP_128080970.1|1366650_1366803_+|hypothetical-protein
MERVRDFFVLLFCVLLFTYEFLALNVRIMFRSVKKKKSRETTPGFKFPVL
>NZ_CP003409.1|WP_038034463.1|1366783_1367704_-|3-phosphoglycerate-dehydrogenase
MARYRVHVNDPLDKEATQLLMSKDELEVTSEHLEKDELMKIIPEVDVLVVRSATKVTADIIEAGKNLKIIARAGIGLDNIDVQKAKEKGIKVLNTPGASAPSVAELAMGLMLACARHIARATISLKEGKWEKKALNGKELLGKTLGLIGFGNIGQEVAKRALAFGMKIIAYDPAKPETDLPIEYVDLDTLFKESDFISLHVPLTESTRHIINRESIAKMKDGVIIVNTARGGTIDEEALYEALVSGKVYAAGLDVFEVEPPTDEIRKKLLSLDNVVATPHIGASTDEAQNRVGIELVEKIFKELGI
>NZ_CP003409.1|WP_038034462.1|1367709_1368864_-|alanine--glyoxylate-aminotransferase-family-protein
MGKFLKKHYIMAPGPTPVPNDILTEGAKETIHHRTPQFVSIMEETLESAKYVFQTKNNVYAFASTGTGAMEAAVVNLVSPGDKVIVVVAGKFGERWKELCQAYGADIVEIALEWGDAVTPEQIEEALNKNPDAKVIFTTYSETSTGTVIDLEGIARVTKEKDVVLVTDAVSALGAEPLKMDEWGVDVVVTGSQKGLMLPPGLALISLNDKAWELVEKSRSPRYYFDLRAYRKSYPDNPYTPAVNMIYMLRKALQMIKEEGIENVWERHRILGDATRAAIKALGLELLSKRPGNVVTAVKVPEGIDGKQIPKIMRDKYGVSIAGGQGKLKGKIFRIAHLGYMSPFDTITAISALEFTLKELGYEFELGAGVKAAEAVFAKEFIGE
>NZ_CP003409.1|WP_038034460.1|1369069_1369627_+|ribosome-recycling-factor
MVNPIIKEAKEKMKRTLEKIEDELRKMRTGKPSPAILEEIKVDYYGVPTPVNQLATISVSEERTLVIKPWDKSVLSLIEKAINASDLGLNPINDGNVIRLVFPSPTTEQREKWVKKAKEIVEEGKIAIRNIRREILKKIKEDQKEGLIPEDDAKRLENEIQKLTDEFIEKLDEVFEIKKEEIMEF
>NZ_CP003409.1|WP_038034457.1|1370316_1371129_+|phosphatidate-cytidylyltransferase
MDDLKTRVITASVVAPFVVLCFVSYESLIGLVSAIVILAGYELITLEMKERDARFFYVILLALYPVLYGLVFEEPTQPLSILFITGVVFSLITDKAPSQVFKTVAAFSIALIYVTFFLSFFLPIYRDFGAANALLVLTSTWVFDSFAYFTGLKFGRTRISPRYSPRKSLEGVIGGFLGVVIYTFLYRLVVNDLLSVNVIGFGTFLPFAATVAVMDTFGDIFESALKRHYGVKDSGKTLPGHGGMLDRIDGLLFVAPVSYIVFKILEGVVR
>NZ_CP003409.1|WP_038034455.1|1371125_1373717_+|alanine--tRNA-ligase
MRYMTSEEIREAFLKFFEKKGHKILPSASLIPDDPQLLFTVAGMVPFKPIFWGKVEPVYTRVATCQKCLRTVDIENVGKTPRHHTFFEMLGNFSFGDYFKEEAIEWAWEFLTQVLGVPEEKLWVSVYEEDEEAFRIWNEKIGLPEKKILRMGKEDNFWGPAGPTGPCGPDTEIFYDTGYSKGCPEGEECTPANSEGRFVEIWNLVFTEYYQDEEGKLHPLPRKNIDTGAGLERFCAMMQGVYSNFDTDLFQPIINRIEELTGVGYKTDEEKDVSIRVIADHIRAITFLISEGVFPSNEGRGYVLRRIIRRAMRHGILLGMSEPFLYRIVDAVVEKMGKVYPEIVRGEGMVKEVLSAEENRFLKTLEQGMKVFDEIVEKKGKIDSEDAFRLYDTYGLPLELTLEIAKEKGVEVDVQEFNKYMEEQQRKSRAAMGDVEFARRYEYLEKLPKDFRIEFTGYEKLEDEGEVVLIARDDETVEEASEGTVEVVFSRTPFYAEKGGQVSDTGMVEWRDGKALVEYVFEASEGVIVQRIKILDGTLRRGQKVVLRVDKKRRESTMRNHTATHLLHAALKKVLGDHVRQAGSLVAPDRLRFDFTHFKGLSSSEIEQVEDLVNEWIMEAIPVEVRYTSYEEAVKSGVVALFTEKYGDVVRVVEVPGVSKELCGGTHVKNTGQIGLFKIISEESVSSGVRRIEAVTGFSALELLRNQKKLIDQLKEILGAREDELTDRVLSLREKVKELEKKLSQGRISEKMITMKQLEDGVKVFHGVFEGVEAKHLGGIADNVLKKEGEGIVILFSKFENKVFLVVKVSENLLDRYDASSIARNIAKELGGSGGGRKNFAQAGGRHPERIKDVLERLEEFLR
>NZ_CP003409.1|WP_012311126.1|1373723_1374776_+|hypothetical-protein
MELVVDARELKEWVYLLDKLVGTTEPTARFLSFFYRDGLWVSASDNCAKVEIFLGEIPRFEDSRIVSLDLVKYFLSDVKVSDVRITVLQERLVLKAGNEVLDVRCKTGEIPPGDGEEEFLCTLTKREFEGALNFASSNLDEGEFLILLFEEKDVLMFGASAGIMTLAQISTIPKKPFSTKIPYVTVRHIFKALQRLDVQTLDFYEKSGKLVVKYPHFVMEVCGDEVGEEEIKKLRALLKEKTAERIDARRQVLAKLVRKAAVLSRGDYATISRRGESLKVQVKRKNLSYTAELFVESGRDFVVVFPSKKLRSALARMDTERIFLEITERFLKISNFSGTRVIYLELEEFF
>NZ_CP003409.1|WP_011943862.1|1374731_1375604_-|Hsp33-family-molecular-chaperone-HslO
MIYYGTMFDHKVRFSIVRMREVVEEARNRHSLSYLATVVLGRALIGAALVTPWLAEKERWTLDIEGNGPIRRVVAQSTSEFTVRGYVANPKVELPLNEKGKFDVAGAIGQGVLRVVRDLGLKTPFVSQLPLVSGEIAEDLAYYFAVSEQIPSAFSIGVLVDSGGVKIAGGFAVQIIDRTLEQEKVELIERNIKNLPYITELFQKAEPLDVLERIFGEKVGFVETAEIRYKCDCNREKAKNALLVLDKKELEDMRKEGKGEVVCKWCNTKYVFSEEELEELLKFKVDNSGS

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP003409_4	4.34|926498|37|NZ_CP003409|PILER-CR	926498-926534	37	NC_017073	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC3, complete sequence	71712-71748	8	0.784
NZ_CP003409_4	4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT	926498-926533	36	NC_017073	Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC3, complete sequence	71712-71747	9	0.75
NZ_CP003409_4	4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT	926498-926533	36	NZ_CP031836	Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence	180063-180098	9	0.75
NZ_CP003409_4	4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT	926498-926533	36	NZ_CP020458	Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence	193395-193430	9	0.75
NZ_CP003409_4	4.34|926498|37|NZ_CP003409|PILER-CR	926498-926534	37	NZ_CP031836	Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence	180063-180099	10	0.73
NZ_CP003409_4	4.34|926498|37|NZ_CP003409|PILER-CR	926498-926534	37	NZ_CP020458	Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence	193395-193431	10	0.73
NZ_CP003409_4	4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT	926498-926533	36	NZ_CP009417	Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence	200415-200450	11	0.694
NZ_CP003409_4	4.34|926498|37|NZ_CP003409|PILER-CR	926498-926534	37	NZ_CP009417	Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence	200414-200450	11	0.703

1. spacer 4.34|926498|37|NZ_CP003409|PILER-CR matches to NC_017073 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC3, complete sequence) position: , mismatch: 8, identity: 0.784

gttttacaaaaaagaatattttttcaaaatcaaccgg-	CRISPR spacer
attttacaaaaaagaatattttat-gaaaccatcgcgc	Protospacer
.********************* * .***.** *  * 

2. spacer 4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT matches to NC_017073 (Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC3, complete sequence) position: , mismatch: 9, identity: 0.75

gttttacaaaaaagaatattttttcaaaatcaaccg	CRISPR spacer
attttacaaaaaagaatattttatgaaaccatcgcg	Protospacer
.********************* * *** .    **

3. spacer 4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.75

gttttacaaaaaagaatattttttcaaaatcaaccg	CRISPR spacer
gcgtcataaaagataatattttttcaaaatcaataa	Protospacer
*. *.*.****.* *******************. .

4. spacer 4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT matches to NZ_CP020458 (Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence) position: , mismatch: 9, identity: 0.75

gttttacaaaaaagaatattttttcaaaatcaaccg	CRISPR spacer
gcgtcataaaagataatattttttcaaaatcaataa	Protospacer
*. *.*.****.* *******************. .

5. spacer 4.34|926498|37|NZ_CP003409|PILER-CR matches to NZ_CP031836 (Lactobacillus amylolyticus strain L5 plasmid p1, complete sequence) position: , mismatch: 10, identity: 0.73

gttttacaaaaaagaatattttttcaaaatcaaccgg	CRISPR spacer
gcgtcataaaagataatattttttcaaaatcaataat	Protospacer
*. *.*.****.* *******************. . 

6. spacer 4.34|926498|37|NZ_CP003409|PILER-CR matches to NZ_CP020458 (Lactobacillus amylolyticus strain L6 plasmid pL6-1, complete sequence) position: , mismatch: 10, identity: 0.73

gttttacaaaaaagaatattttttcaaaatcaaccgg	CRISPR spacer
gcgtcataaaagataatattttttcaaaatcaataat	Protospacer
*. *.*.****.* *******************. . 

7. spacer 4.17|926498|36|NZ_CP003409|CRISPRCasFinder,CRT matches to NZ_CP009417 (Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.694

gttttacaaaaaagaatattttttcaaaatcaaccg	CRISPR spacer
aaattacaataaagaatattttttgaaaagagtcat	Protospacer
.  ****** ************** ****  . *  

8. spacer 4.34|926498|37|NZ_CP003409|PILER-CR matches to NZ_CP009417 (Jeotgalibacillus malaysiensis strain malaysiensis plasmid unnamed, complete sequence) position: , mismatch: 11, identity: 0.703

gttttacaaaaaagaatattttttcaaaatcaaccgg	CRISPR spacer
aaattacaataaagaatattttttgaaaagagtcatg	Protospacer
.  ****** ************** ****  . *  *

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	503336 : 512057	11	Bacillus_phage(42.86%)	NA	NA
DBSCAN-SWA_2	882699 : 890206	9	Bacillus_phage(33.33%)	transposase	NA
DBSCAN-SWA_3	992855 : 1001455	10	Staphylococcus_phage(37.5%)	transposase	NA
DBSCAN-SWA_4	1150735 : 1158347	10	Bacillus_phage(28.57%)	NA	NA
DBSCAN-SWA_5	1472936 : 1490850	16	Bacillus_phage(25.0%)	NA	NA
DBSCAN-SWA_6	1622603 : 1632271	10	Phaeocystis_globosa_virus(14.29%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP003409|503336:512057|DBSCAN-SWA
TTCATTCTCCACCGGTTCCTATGAGTTCTTTTTTCAACACCCAGATCTGGTTTGGCAGGTAATTGATCGGATTCACGGCTTTCTCATTCACTCTAACCTCGAAATGAAGGTGAGGCCCTGTACTCAAACCGGTGTTTCCAACCCTTCCTATTATCTGACCTTTCTTTACGTACTGACCCTCGTATACATCTATTTGGGAAAGATGCCCGTATATGTGTTCGTAAGAAGCAGATTTTATTTTTATCATGAGACCGTACCCGCCGTTTTCCCCGGCGAACTCCACCACTCCGCTTTCAGCAGCGAATATGGGTGTACCCTCAGGTGCCGATATATCAATTCCTGAGTGAAAGGAATATTTCCCGGTTATGGGGTGAGTCCTCCAGCCAAAACCGGAGGAAATGACACCATAAACAGGCCAGATGAAGAATTTCTCATCGTTGAACGCCTTTCCAATGATACTTTCAGGTATGAACAGCTTCTGTCCCGCATATATGGTGTAAGACTTGAGCTGATTCGCTTCCTTTATGAAAGTAGCGGTTGTGAAGAACCTTTTTGCAATAGTATCGAGGGTGTCTCCTTTTTTTACTGTGTAGAGGTAGCCAGGCGGCTGAGGAATCACGATCTCCTGCCCCACTCTGAGATTGTGAGGGTCGAGTCCGGGATTCCAGTCAAGAAGAAGAGAGGGGGAAATCCCAAAGTTGAGGGATATACTGTAAAGGGTGTCGTTCTTCTGGACCTTGTAATGAATCAGGAAGTAGGATGAGAATCCGTGTACGAAAAAGACAACAAGAAAAAGCAAAAAGAAGCCTCTCTTCATCCTCCCCATCCTTTCATACGAGTTCTATCAGCTTCTCAGGTATTTTATAGGCCGGAAGAACGTAATCAGAGTAACCTTCTTCGATCACCGACTTGGGCATTCCAAAGACGACACATGTTTCTTTATCTTCGGCTATTACCGTTCCACCGTAAAACTTGACCTTGAATGCTCCCTTGGTGCCATCTTTGCCCATACCCGTGAGAATCACAGCTATCGTTTTGGATTTGTATATCTCCGCTGCTTTGTCCAGGGTGAAATCCACCGATGGCCTCACGTTGTTTATTTTATCAGACTTGTCCAGGAAGAAAAAAACCTTGCCGTTCTGGGCTTTCAAACCAAGATGGAAGTCCCCGGGAGCGATATAAACAAAACCGGGCTTGACCTCTTCTCCGTCTTCAGCCTCTTTCACGGTGAGTTCAGAGGTGCTATCCAGCCTCATTGCGAGCGATTTTGTGAAACCAGGAGGCATGTGCTGGACCACAACTATTGGAGCTGGGAAGTTTTTCGGAAGGTTTGGGATGATCATGTCGAGCGATCTGGGCCCTCCGGTTGAGGAACCTATAACCACGATTTTCCCACTTACAGCTGGTTTGGTTATGGTGAGCCGTGAAACCTTCGGCCTGAAAAGAAGCGTTCGTGGATCCACGTTCATCGCCTGTCTGATCTTTTCCAGAAGTTCCGGGGCAACTTGTCTGAAAGTGAGAGAAACCGAACCGTGCGGCTTGGTGATGAAATCCACCGCACCGTTTCTGAGAGCTTCTATTGTGATCGCCGCGCCTTCTTCCGTCAAACTGTTCACCATGATGACTCGTGTGGGGACTTTTTTCATGATGAGTTTCAGCGCTTCAATTCCGTTCAGATTCGGCATTTCGATGTCCATGGTTATGACGTCTGGTTTGAGTTCTACAGCCTTTTCAACGGCTTCCAAACCGTCTTTAGCGAATCCCACTACCTTCATGTCTGGCTGAGAATCTATGATATCTTTGAGTACCATCCTCATGAACGCCGAGTCATCTACCACCAGTACTCTTATCACCCTGTCTGTCATTTCTGTACCTCCTCATGGAAAAAGAGATTACAGGAAAGAATATCAAAACACCAGAAACGAAGAACTTGGCAAACGAAGGTTCCCAGGAGAAAAGAGCTTTTCCCAGTATCAAAATACCCACAACCACTGAAAAAAGTGAATACCAGAGAACCACACCGGCCGCTATATCTTTCACGAGCTTTACCGATTCACTGTACTCCTTGAAGAAAAGATCGAGAAATTTTTCCACCACCGTGTTGAGAAGCTCCGCTCCAATGACAGAGAATATGGCAAAGTATATCCACAAAAGATCATTCGCACTCAACGGCAAAAAGAGAGAAAAAATAGCCACAACGATCCCTATGAAGAAATGTATTTTGAGATTTCTCTCAAGTTTTAAGGCATTTTCTATTCCTTCAAAGGCGTTTTTGAAGGATTTCAAAATATTATTCGAATCCCGCTGCAAGCCTCTTCCACACCCTCTCTGTTTTTATCTTGAACTGTTTTTCGAACATGTTGTAGCCGAACTCCAAAGCCTTCAGGTTTATGTCCCACAGAGGCCTCCTCACGTGATCTTTCAGTGCTCTTTTCAAAGAATCGAGCTTCACTATGTTACAAACTTTGGCAAGTACCCCCACCATTATGACGTTAGAAACCATAGCCGTCTTGAATTCTGAAATGGCCCTTTCTGTAGCGGGTACAAACAGAATCTTTCGGGTTATTCTCTTTACGAAGTCAGGAACGTTCTTCACAAAAGTTTGATCGAGAATGACCACACCGTTTACTTTCACCGACTTGTAAAGCTCGTCCATCGCTTTCTGATGAAGAATACACACAATGTCGAAATATTCACTCTCTGGATAGTCTATCGGTGAGTCGTCGTAAAGCACGTCGCAGTAACTGACATCTCCTCTCACCTGAGCGCTGTAAGACTGCGTTTGGACAACCCATTTACCTTCATAAACGAGAGCCTTCGCGAGTATCAAACCCGCCAGTATGTTTCCCTGTCCGCTGATACCCGCTATTCGTATGGAAACAGGCTCTGTCATTCCATCGCACCTTCTTTTCTGGTCAAACGCCTGTAAACAGTCAGAAAGTCTTCTTTTTCTTCCTCACGGAAGATTCCTATCTTTATTTTACCTTCTTCGGGTCGTTCCAGAAAACACGTGTTGTTCTTGAAGTATTCCATCATCTGATGAGGTTCGGGCATGCCGTTGTACCGTCCAAAGTAGGTGTGACAGTTCGTTAGAACGTCAACAACAGAAATTCCCCGGTGCTGAAGGGCCTTTTTTAGGACTCTCACCAGGTGATCGTAGTGATAAACGGTACTTCTCGCAACGAAAGTGGCTCCAGCGGAGAGAGCTATCTCCACCGCGTCGAACGGTTTTTCAAAGGCCCCAAGAGGAGTTGTCGAAGTCTGATAATACTGAGGAGTCGTTGAAGAAACCTGGCCACCTGTCATGCCGTATATCATGTTGTTGAAAATGACAACGGTTATATCTATGTTCCTCCTACACGCGTGTATGAAATGGTTCCCACCTATCGAGAGAATGTCTCCGTCTCCTCCCATCACAACCACTTCGAAATCCGGCTTTGCCAGCTTCACTCCCGTTGCGAAGGCGATTGCCCTTCCATGAAGGGTGTGCAACGTGTTGAAATCGAGGTACCCTGTAGCCCTCGAGGAACAACCGATTCCAGACACCACAGCCACTTTTTCTTTTGGAAGTGCGAGGTCATCCACGGCTTCCAGGAACGCTTTCAGGACTATTCCGTTCCCACAACCCGGGCACCAGACGCTCGGCCACCTGCCCGGCCTGAGGTAAGAAATGAGTCTTTCCGTCTTCACATCTCATCACCTACAAAGCGAACACTTTCCACTCCCGTGAACTTGAAGAAGAAATCTGTCAGAGGATCAGGATAATCCTTCTCGTAAACGACTCTCTTTATTCCAGCGTTAACTATGAGTCTTGCACAGATTGAACACGGTTTGTGCGTGACATATATGGTAGCACCGTTGACCGCTATACCGAACTTTGCCGCTTGCATCAATGCGTTCTGCTCCGCGTGTAGCGCGTAGCATATCTCCTGGTGTTCTCCAGAATTTATTTCAAGGTCATCGCGGATACATCCGATTTCGTTGCAGTGGGGAAATTTCGAGGGAGGCTGGTTGTATCCGGTGGCGAGGATTCTGTGATCTTTCACAATCACAGCTCCCACTTTTCTGTGAACACAGGTCGATCGCTCACTAACCATCCTGGCAATCCTCATGAAGTAGGAGTCCCAGGATTCTCTACTATCCGGTTTCTTCTCTATTTTCAGATTGTTCAGGTATTCCTCCAGCCTGTCTTTCACAAACTCACCCTTATGAGATTGTATCACAAACAAAAGCGAGGGCTTTACGTGCCCTCGCCTTCTGTAGTATAATTTCAATCCCAGACGTCGTTTCAAGGGAGGCCGAAAAAAGGGGAGGAGGTTTCTCCTCCCGAAAGGAAACCTTATCCTATGGCCTCCCGTCCTCTTTCTCCCGTTCTGATCCTAATGCAATCCAGCAGATCCAGCACAAAAATTTTCCCATCTCCTATGTTTCCTGTCCTTGCTCCTTTTTGAATCGCCTCGATAGTTGGTTCAACGAATTCTTCATTGACCGCTATGAGAAGCATCACCTTTTTGAGAAGATTCACCTCTTCTACTTCACCTCGATACGTTTCTGTGTATCCCTTCTGTTGACCACATCCAAGAACGTTCATGACAGTCATCTTGTAAATCTGAGCATCGAAAAGTGCCTTTTTCACATCCGGTAACTTGTGGGGTTGTATAACAGCTATGATCAGTTTCATACTGTCACCTCCTTCATCTTGTGGTGAAGATTTCAAAATCAGCGTATCCTTCCATGCCGTGCTCCTCTATATCCAGCCCCTTCAACTCTATGTCTCTGTCCACCCTCAAGCCAATTGTCTTTTTGATGAACCAGAAAACAAGGAAACTGGTCACTACTGTCCAGGCAAACACACTGACCACCCCCAGAAACTGAACTCCAAGTTGATGCACTCCTCCTCCGAAGAAGAGTCCGTTCACATCCCCCATCCCGCTTGCAAGAGCGTACTTGCTCTCCGCAAAGAGCCCCACGGCGAGAGTCCCCCAAGCACCGTTGACACCGTGAACGGATATGGCCCCAACGGGATCGTCGATTTTCAAAACTTTGTCGAAGAACTCAACCGCAAACACTACGAGCACCCCTCCGATCGCTCCTATGATCAAAGAACTCACAGGAGACACCACAGCACACGGTGCGGTGATGGCAACAAGGCCAGCAAGAGCACCGTTCATCGTCATACTCGCATCCGGCTTTCCATATTTTGCCCATACGGTGAACATCGCGGCAAGTGCTCCAGTGGCGGCAGCGAGGTTGGTGTTCAATATGATCATCCCTATCGCACCGTTCGTTCCGGCAAGGGTACTCCCTCCATTGAACCCGAACCATCCAAACCAGAGGATGAAGGTTCCGAGAGCAGCAAGAGGAATGTTGTGCCCTGGAATAGGCATGGGATTCCCCTGACTGTCGTACTTTCCAAACCTGGGCCCAAGAAGAGCCGCACCTATCATGGCAGCCCATCCACCAACAGAATGAACAACTGTGGAACCTGCAAAATCGATAAAACCTTTCTGTGCAAGCCATCCTCCTCCCCAGATCCACCTTCCAACAACCGAATAGATGATTCCTGTTATGAAACCTGTGTAAGCGAGGTACGCGGAAAACTTAGTGCGCTCTGCCATCGCTCCGGACACAATCGTCGCGGCCGTACCTGCGAAAGCCATCTGAAACATCCACATGGCAAAATCCCAGAGACCTTCTTTTGTGGAGGGATCAAAGGTGAGAGGATGTTTCCCGAACATAATCCAGTAACCGAAGATGAAGAAGACCACAGATCCGATCGCAAAATCCATGAGGTTTTTCATGAGCACATTCACCGTGTTCTTTGCGCGGGTGAAACCGGACTCTACCATGGCAAAACCCGCCTGCATGAAGAAGACCAGCGCTGCGGAAATGAGGATCCAGACCATGTCGAGTGACCAGCCGACATCTGTGACACCGTTCTGGGCGAAACCCACAGAAAGAAAAGCAAGAACTAGCAACAAGGAAAAAACTCTCTTTCGCATAAAAACACCTCCTTTTGGTAAATATGTTTGTTGACTCTTTTAAGATTAATTCTCTATCAATATGATACAAATAAACAATATTCTTGAAAAACAAAAAACAAACACCATGGGGTTCGTTTTCTTGAGGGTACAAACCCCATGTTGGATTGGATATTTATTACTAATTTCCGGGAATAAATTTCTGGAGGATTTTATATGTCTCAATACTATCAATTCAAAAAACCGCTGTCAATTATGAGAATGTTTCAGTTTGACTGGGAAGATTGTTAACACTCCGGGTTGTATAATCGTCGGGGAGGGATCGACATGTCGGGAAAATTGACCGTAATCACGGGTCCCATGTACTCCGGAAAGACAACCGAGCTTCTCTCCTTTGTGGAGATATACAAACTGGGAAAGAAAAAAGTCGCTGTTTTTAAACCAAAAATCGACAGCAGATATCACTCCACCATGATCGTCTCTCATTCTGGAAACGGTGTTGAAGCACACGTGATAGAACGTCCTGAGGAAATTCGAAAGTACATCGAAGAAGACACCCGGGGAGTTTTCATAGATGAGGTGCAGTTCTTCAGCCCCGGTTTGTTTGAAGTGGTGAAAGATCTTCTCGACAGAGGAATAGATGTTTTCTGTGCGGGACTCGATCTCACACACAAGCAAAATCCCTTTGAAACAACCGCTCTGCTTCTCAGCCTCGCCGACACCGTGATCAAAAAGAAGGCAGTCTGTCACCGATGTGGTGAGTACAACGCTACTCTCACATTAAAAGTAGCAGGAGGCGAAGAAGAAATAGACGTTGGGGGACAGGAGAAATACATTGCGGTCTGCAGGGATTGTTACAACACCCTCAAAAAACGAGTTTGAAGGTGCTACCTTTTCCTTCTTCGCTTTCAAGAATTACCTTCGCTTTCAATCTGGAAGCGAGTTCTTTGACTATGGAAAGGCCAAGTCCAGAACCCTCTGTGTTTCTGGATATTCTGTAGAATCTCTCAAAGATTCTCTTCTGTTCTTTTTTCGGAATTCCAGGTCCTGTGTCCTGAACGTAGATGGTTAATCTACCTTCCTTTCTTGCACCGACGATCACTTTCCCTTTCTCTGTGAACTTCACAGCGTTATCGATCAGATTCTCCAGTATCACCCTCAAGGTATCTTTCTCGGTTTCTAAAAATAGATCTTCTGGGCAATCTATTTCCAGCACCAAACCCTTTGATTCTGCTTTCGGTTTGAATTCATTCACGATCTGCTGGAGAAACTCCTTGAGGTTTATTCTCTCTTTCACAACACCGTTGAAAGAACTTTCGCTTTTCACGAGAAGAAGGAGCTGATTTATTTGTTTACTCATCTTCTCGACGTTCTTTTCCATTATGCCCAGCTTGTTTTTCACATCATCTGGTAAATCTTCTCGATACTTCAAAACATCGAGACTTGTTCTCAGAACAGAGAGAGGTGTTTTCAGTTCATGGGAGGCGTCCATCGAGAATCTTTTCAGGCTGTTGTAGGCATTCCTCACGGGAAGCAGAACCAGGCTGGACACGAAATATCCGAATACAGCGGCTCCCCCCGCAAAAAACAGAATCACGAGCAAATACATGGAAAGAAGTCTTCTGCTTCGCTCTATGAGATCGGAGATGTCCTTTCCCACCCTCAGGAATATTGTGGTGTCTCCCAGATCTATCTTTTTGGTGAAAATCCTGTAGTTCCCTTCCGTGGAAAACCCCTCTTCCACGGGAGTTTCGGGAGTTCCTATCTGTTCTCCCACCTCCAGAAAGACCTCTCCCGAGGGAAACAGAAACTGAAACGCCTCACCACGTGGAACAAAGAGAGGATCCACTCCTCTAAACGTGCGGAGCATGCCCATCATACCGGGCGCTTTCAGTCTTCTTTCGATGAGATCCGCTGTTCTCCTCAGTTCACCATCGAATTGGGTGGTTATTCTTCTCTTTTCTACAATGAAAACAGCGCCCACCGTGATGGCCACTATGAGAACTATAGAGAGTGTGAACACGGCCGTCCAGATAAGCTGTGTTTTTCTGAATGCCTTCTTCTCATTCGTCACGGGCAACATAACCGATACCTCTCACCGTGTGAATTATTTTCCTTTTAAACCCTTTGTCCACTTTCTTCCTCAAATTCTTTATATGACTTCTCAAAACATCGGAGAAAACTTCATCATCGAAGCTCCACAGGTGTTCCTGGAGCTCCTCCTTTGTGACAACTCTGTTTTTGTTCATCACAAGGTATTCCAAAATTTGGTACTCCTTCTTTGTCAAATCTATTTCTTTACCGCCCCTGTATGCCTTTTTAGTGGCTGTATCCAAAATCAAGTCACCGCACACGAGTTTTGTGCTTTTGCTTTCGCTTTTTCTTCTGATGAGAGCTCTCACCCTGGCTATGAGCTCTCTGAGATCGAAAGGTTTGGGAAGGTAATCGTCCGCCCCCATGTTGAGACCCTTCACACGGTACTCTACATCTGAAAGAGCTGTGAGCATCAAAACGGGGGTGTTCACTCCGTTTTCCCTCATAGACTTCAGGATCTCCCACCCATCGTGGACGGGAAGCATTATATCAAGAATCACAACATCGAAAGGTTCGTTCAGAGCCATGTACATACCCTCTTCTCCATCGTAACAAACATCGACGGTGAACATTTCTTTCTTTAAAGCCTCGGCTATCAGATCGGCGAGATCTCTTTCGTCTTCTACCACAAGAACTCTCACGTTCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP003409|503336:512057|511379_512057_-|WP_012895855.1|DBSCAN-SWA
MNVRVLVVEDERDLADLIAEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRENGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKSTKLVCGDLILDTATKKAYRGGKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLWSFDDEVFSDVLRSHIKNLRKKVDKGFKRKIIHTVRGIGYVARDE
>NZ_CP003409|503336:512057|507674_508016_-|WP_011943147.1|DBSCAN-SWA
MKLIIAVIQPHKLPDVKKALFDAQIYKMTVMNVLGCGQQKGYTETYRGEVEEVNLLKKVMLLIAVNEEFVEPTIEAIQKGARTGNIGDGKIFVLDLLDCIRIRTGERGREAIG
>NZ_CP003409|503336:512057|505625_506228_-|WP_004083247.1|DBSCAN-SWA
MTEPVSIRIAGISGQGNILAGLILAKALVYEGKWVVQTQSYSAQVRGDVSYCDVLYDDSPIDYPESEYFDIVCILHQKAMDELYKSVKVNGVVILDQTFVKNVPDFVKRITRKILFVPATERAISEFKTAMVSNVIMVGVLAKVCNIVKLDSLKRALKDHVRRPLWDINLKALEFGYNMFEKQFKIKTERVWKRLAAGFE
>NZ_CP003409|503336:512057|506224_507025_-|WP_004083245.1|DBSCAN-SWA
MKTERLISYLRPGRWPSVWCPGCGNGIVLKAFLEAVDDLALPKEKVAVVSGIGCSSRATGYLDFNTLHTLHGRAIAFATGVKLAKPDFEVVVMGGDGDILSIGGNHFIHACRRNIDITVVIFNNMIYGMTGGQVSSTTPQYYQTSTTPLGAFEKPFDAVEIALSAGATFVARSTVYHYDHLVRVLKKALQHRGISVVDVLTNCHTYFGRYNGMPEPHQMMEYFKNNTCFLERPEEGKIKIGIFREEEKEDFLTVYRRLTRKEGAME
>NZ_CP003409|503336:512057|509643_510198_+|WP_038033558.1|DBSCAN-SWA
MSGKLTVITGPMYSGKTTELLSFVEIYKLGKKKVAVFKPKIDSRYHSTMIVSHSGNGVEAHVIERPEEIRKYIEEDTRGVFIDEVQFFSPGLFEVVKDLLDRGIDVFCAGLDLTHKQNPFETTALLLSLADTVIKKKAVCHRCGEYNATLTLKVAGGEEEIDVGGQEKYIAVCRDCYNTLKKRV
>NZ_CP003409|503336:512057|504165_505200_-|WP_038033563.1|DBSCAN-SWA
MTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAVELKPDVITMDIEMPNLNGIEALKLIMKKVPTRVIMVNSLTEEGAAITIEALRNGAVDFITKPHGSVSLTFRQVAPELLEKIRQAMNVDPRTLLFRPKVSRLTITKPAVSGKIVVIGSSTGGPRSLDMIIPNLPKNFPAPIVVVQHMPPGFTKSLAMRLDSTSELTVKEAEDGEEVKPGFVYIAPGDFHLGLKAQNGKVFFFLDKSDKINNVRPSVDFTLDKAAEIYKSKTIAVILTGMGKDGTKGAFKVKFYGGTVIAEDKETCVVFGMPKSVIEEGYSDYVLPAYKIPEKLIELV
>NZ_CP003409|503336:512057|507021_507531_-|WP_004083243.1|DBSCAN-SWA
MKDRLEEYLNNLKIEKKPDSRESWDSYFMRIARMVSERSTCVHRKVGAVIVKDHRILATGYNQPPSKFPHCNEIGCIRDDLEINSGEHQEICYALHAEQNALMQAAKFGIAVNGATIYVTHKPCSICARLIVNAGIKRVVYEKDYPDPLTDFFFKFTGVESVRFVGDEM
>NZ_CP003409|503336:512057|505162_505645_-|WP_011943146.1|DBSCAN-SWA
MQRDSNNILKSFKNAFEGIENALKLERNLKIHFFIGIVVAIFSLFLPLSANDLLWIYFAIFSVIGAELLNTVVEKFLDLFFKEYSESVKLVKDIAAGVVLWYSLFSVVVGILILGKALFSWEPSFAKFFVSGVLIFFPVISFSMRRYRNDRQGDKSTGGR
>NZ_CP003409|503336:512057|508029_509337_-|WP_029683380.1|DBSCAN-SWA
MRKRVFSLLLVLAFLSVGFAQNGVTDVGWSLDMVWILISAALVFFMQAGFAMVESGFTRAKNTVNVLMKNLMDFAIGSVVFFIFGYWIMFGKHPLTFDPSTKEGLWDFAMWMFQMAFAGTAATIVSGAMAERTKFSAYLAYTGFITGIIYSVVGRWIWGGGWLAQKGFIDFAGSTVVHSVGGWAAMIGAALLGPRFGKYDSQGNPMPIPGHNIPLAALGTFILWFGWFGFNGGSTLAGTNGAIGMIILNTNLAAATGALAAMFTVWAKYGKPDASMTMNGALAGLVAITAPCAVVSPVSSLIIGAIGGVLVVFAVEFFDKVLKIDDPVGAISVHGVNGAWGTLAVGLFAESKYALASGMGDVNGLFFGGGVHQLGVQFLGVVSVFAWTVVTSFLVFWFIKKTIGLRVDRDIELKGLDIEEHGMEGYADFEIFTTR
>NZ_CP003409|503336:512057|503336_504152_-|WP_038033565.1|DBSCAN-SWA
MKRGFFLLFLVVFFVHGFSSYFLIHYKVQKNDTLYSISLNFGISPSLLLDWNPGLDPHNLRVGQEIVIPQPPGYLYTVKKGDTLDTIAKRFFTTATFIKEANQLKSYTIYAGQKLFIPESIIGKAFNDEKFFIWPVYGVISSGFGWRTHPITGKYSFHSGIDISAPEGTPIFAAESGVVEFAGENGGYGLMIKIKSASYEHIYGHLSQIDVYEGQYVKKGQIIGRVGNTGLSTGPHLHFEVRVNEKAVNPINYLPNQIWVLKKELIGTGGE
>NZ_CP003409|503336:512057|510181_511399_-|WP_038033555.1|DBSCAN-SWA
MLPVTNEKKAFRKTQLIWTAVFTLSIVLIVAITVGAVFIVEKRRITTQFDGELRRTADLIERRLKAPGMMGMLRTFRGVDPLFVPRGEAFQFLFPSGEVFLEVGEQIGTPETPVEEGFSTEGNYRIFTKKIDLGDTTIFLRVGKDISDLIERSRRLLSMYLLVILFFAGGAAVFGYFVSSLVLLPVRNAYNSLKRFSMDASHELKTPLSVLRTSLDVLKYREDLPDDVKNKLGIMEKNVEKMSKQINQLLLLVKSESSFNGVVKERINLKEFLQQIVNEFKPKAESKGLVLEIDCPEDLFLETEKDTLRVILENLIDNAVKFTEKGKVIVGARKEGRLTIYVQDTGPGIPKKEQKRIFERFYRISRNTEGSGLGLSIVKELASRLKAKVILESEEGKGSTFKLVF

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_038033565.1|503336_504152_-	M23 family metallopeptidase	A0A7K9	Microcystis_virus	7.5e-20	43.9
WP_038033563.1|504165_505200_-	chemotaxis response regulator protein-glutamate methylesterase	B5LWA6	Feldmannia_species_virus	3.5e-06	41.9
WP_011943146.1|505162_505645_-	diacylglycerol kinase family protein	NA	NA	NA	NA
WP_004083247.1|505625_506228_-	oxoacid ferredoxin oxidoreductase subunit gamma	NA	NA	NA	NA
WP_004083245.1|506224_507025_-	2-oxoacid:ferredoxin oxidoreductase subunit beta	NA	NA	NA	NA
WP_004083243.1|507021_507531_-	deoxycytidylate deaminase	A7KUY9	Bacillus_phage	8.5e-30	44.4
WP_011943147.1|507674_508016_-	P-II family nitrogen regulator	NA	NA	NA	NA
WP_029683380.1|508029_509337_-	ammonium transporter	H8ZJB2	Ostreococcus_tauri_virus	1.7e-74	42.7
WP_038033558.1|509643_510198_+	thymidine kinase	Q6GYZ9	Mycoplasma_phage	2.3e-28	37.7
WP_038033555.1|510181_511399_-	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	3.6e-18	31.8
WP_012895855.1|511379_512057_-	response regulator transcription factor	W8CYM9	Bacillus_phage	4.6e-31	34.6

Sequences of DBSCAN-SWA_2

Nucleotide sequences of DBSCAN-SWA_2

>NZ_CP003409|882699:890206|DBSCAN-SWA
AGTGTCAAGATATGTGATCAGAACCTACAAAGTCCCTGTGCCGGTGGAATTGTATCCTTTGTGTTCCGAGCTGAACAGGATCGCCGCTCGGATCTACAACAAAACCATGTCGCTGGTCAAAAAGATCAAAAACAAGAAAGGTTTTTGGCTCTCACCGAACACAGCGCAAAAATACATCCTTCGCTGGTCGAGCGCTATCGATATCCACACTCACTCCAAACAAGCCATGGTCCAGCTGTACTTTCAGGCACTCAATAGCTACTTTGTTGCAGTCAAAACAAATCCACATGCAAAACCGCCATACAAGAGGAAAAATTTTCTGCCGTTCATTTGGAAAAATCAAGCCATCAAGCTTTTGCCAGATGGGAAGGTCAAGCTCTCGATGGGACGCAATCGAGAGCCATTTGTAATCCCCACAACGTTGCCAGCCGGTACAACAATCAGGCAAGCCAAGTTGGTTTACGAAGCCGGTCGGTATTATCTTCACCTTGCGATAGAGGTGAAGAGTGAGCACAAGAGAGGCCAGAGCCAGAAAGTTATGTCCGTAGACGTCGGAATACTCCGCCCGATAACCTGTTTCGATGGTTCTGAGGTGATTTCATATCACGGTGGTGTTCTCAACAGCATACTCAGATACCGAAACAAAAGACTAGCAGATATCCAGGGGGCTTTGAGTCGATGCCAAAAGGGCTCACGAAGGTATAAAAAACTGTCGAGAGCCAAAAGAAGGGTGCTGTACAAGACGAGAAACCAAATCAACGACGTGCTCCACAAAATCACGAGCCACTTCATCGGTTTATGCGTGCAAAAGAACATAAGCACCATTGTCGTCGGAGACATTACGAACATAAGAGAACGCACAAACGGCAACGATAATTTCAATCAAAAACTGCACCAATGGGCCTTCAGAAAGCTCATGAGCCAGATAGAATACAAAGCGCAAATATTCGGCATCGAGGTTGTGCGCATTTCTGAAGCGCATACAAGCAAAACGTGTCCTGTATGCGGCACTCAAAACAGGCCGTCTGGACGAAATTACAAGTGCGCCGGCTGCGGTTTTGAGTATCACAGGGACGGAGTTGGAGCAATCAACATTTGGAAAAGGTATCTTGGGACGAAGTCCCAAGTAGTAGCGGGCTTGGCACCCGCCAGAGGTGTGAGGTTTAACCCGCACCTCTGTGGCTATGGAGCGATTAGCGCTCCATGGAAGGCAGCCTAAGAGCTGCCAAGAATCCCATCCCCTTCAGGGGATTGGGAGTGTCAAAAGAACCTTATCGGATGGTGAAAACAGGTGAGAAAAGTACTTGTCAAGGAGTTCTCTGAGCCTTGTGCTGGCTTCCTCGTAGTTGGAGACGTTCAGGAACCAGACCTTTTCCAGATGACATCCCTCCCGTCTTTTATGGTCTCGATACCGGATGGGATATTGAGCTTTCCTTCTTTTAGTATTTCGATTATGAGATCTTTTGGGAGAGCCGTTTCGATCCATATTTCGGAGATATCGACGATTTTTAACTCACGGACCGCTATTTTCTGAAGTGCTTTTTCTATTCCTTTCACGTATTTTTCCTTGTCCATCCACATCACCCCAAAACAAAAAGGGGGCATATGCCCCCTTCGTTTCTATGGATTTCATCAGAAGTTGATTTCAAAGTTTCCTCCAACGGGGATTGCGATCACGTTGTTTTTCTCGTAGATTCTCATTTCAACACCTGCACCGAGTCCAACTACGAGTCCTTCAAAGTCTCTTGTGTAGCTGGCACCAACACCAAAGACCCAACCGAATTTACCAAAATCGAACTTGGCCATAGGCCAGCTGGGTCCACCGAATCCCCTTATGACAACTCTGGATTCTCTGTCGAGTTCAATGGAGTATTTGAAAACAGCAAACAGATCGAGTGCGTTCTGACTCGGAGTAGCATCAACAGAGAAAAGAGGAGTAGCATCAGTACCAAGAAGATAAGCAAAACCAAGCCCAAGACCCAGCTCCATATTTTCTGCTACCGGATATGTGAGATCGAGACCAAAATCCAAGTAATTAGCGGCCGTAGCATCGGAAGTTGTAGATGTCGCAGAAACAACAAAATTATAATTCCCAAAAACGCTGACCTTCAGATCCTCCAGCGAGAAAGCGAAAGCTCCCACTGCCACTACCGCGAGAAGAATCACAAGAAGCTTTTTCATGAAAACTCCCTCCCTGTAATGAAATTTTCCGTGTTCAATTATAACACACAGAAGTGGTAAAATATCAAGACAGAGGTGGTGATTTTGAGTCCGGAGAAGTTTCTGCTAAGGTACGCTAAAAAATACTGGTATCTTTTTCTTGTAGGAACTGTACTATCTCTGATTCTCACAGTGATGGAAATCCTCCCACCCCGTTTGATGAAAACGGCGATAGATAAGTTTCTTGTGGAAAGTACTTTATCTTCGTTTGAGCGTTTGAACGGCATTGTAATAACGGCCTTTATAATTTTAGGAATTCGCGTCCTTTCCTTTCTGGTGGGGTTTGCGAGTTCTTATGTAACAGGGTATGCAGGCTCAAAGATAGTCCTTCTGATGAGAAAAGACGTGTTTTCCCATGTCATTTCACTTCCGTATTCTTTTTTCACAGGAATACCTTCCGGAGTAGTTACCACCAGGATCGTTAACGACACACAGAATATCCAGGAGTTCTTCTCTTCTGTTGTGACCAGTGTGATTATGGATGTTCTCCTTTTGGGAGCGGTCGTTGTTTCTCTCATTCAGCTCAGTCGAGAGCTTTTTGGCCACGTCTATTACCTTTTGCCTTTGATCGTCATTTCGATCCTCCTGTTCAGATACTTCGACAGGAGGGCTTATCGCAAGGTCAGAACCAACCTCGCCCGCCTCAACGCCTTCCTGGCAGAGCACATAGCAGGTATCAACGTGATAAAAATCTTGAATCTGGAAAAACACAAAGAAAAGGAGTTTTCCACAGTGGCCACAGAGTATTACAGATCTCTGATGGAACAACTCTACGTTTTCGGAGTCTTTCGTCCTCTCATGGATTTTCTTTACTTTCTGGGAGTGAGTCTTGTTTTGTGGTACGGTGCCAGGTATATCGCGAATAAAACCCTTGGATTCGGTTCTCTGTACGCTTTTGTATCTTACCTCGATATGTTCTTCAGGCCTCTCAGAGACCTTTCCGAAAAGTACGATATAATCCAGAACTCCATGGCATCCTCCGAGAAAATTTTGAACCTCTTAAAAGAAGAACCAGAGGTCATAGGAAATCCAAATGGACCGAATGAAATATCGAAAGGTCGTGTTCGTTTTGAGAACGTGTGGTTTTCGTACGACGGAAAGAACTGGGTGCTGAAGGACATAAACTTGGATTTTCAACCAGGGAAACTGTACGCGATAGTGGGAGAAACAGGTGGTGGGAAATCCACTCTCATGAGCCTGATAAACGGTCTTTATATACCGCAGAAGGGAAATATATTCATCGATGAGATTCCGCTTCTGGAGTACAATTTAAAACTTGTGAGAAAACAGATAGCAGCTGTACCGCAGGATGTTCTGTTGTTCAGCGGAACGATCCTCGATAACATCAGGCTTTTCGATGAGAGCATACCAGAAGAACGAGTTCTCGAAGCACTGAAAAGAGTCCATGCTCTGGATATAATAGAGAGGTTACCCGGAGGTGTTTACTACGAAATAGTCGAAAGAGGAACCACTCTCTCAGCAGGCGAAAGGCAACTCATAGCGCTCGCAAGAGCCGTTTTGTTTGACGCGAAGATCTTCATTCTTGATGAAGCGACGAGCAACGTGGATGTTATAACAGAGACGAAGATTCAGGAGGCTTTAGAAGAGCTTTCAAAAGACAGGACAGTGATAATGATCGCACACAGACTCTCTACTGTGAAAGACGTCGATGAGATAGTGGTAGTCCACAATGGTAGGATTGTAGAGAAAGGCAATCACTATGAACTGTTAGAGAAGAGAGGATTTTACTACAACCTTTACAAGATACAGTTCGAAAATGCGTAGGGAGGGAAAACAATGGACAGATCAGAAAGATTGATTCAACTCATCTCCGAAAAAGAAGCAGACGCTTTTCTGATAATGAACATAGAAAACTCTGCCAGGGCATCTTCAGTTTACTTTTCCGGATTCACCGGATCTTTTTCCATCATTCTCATCTCCGAAAACACAAGGCTTCTCATAACCGACTCCAGATACACAGTTCAAGCCAAGCAGGAAACGGATTTCGAGGTGAGGGAAGTAAAAGGTGGGGATTTCATTGATGTTCTCAAAAAAACGGTGAATGATCTGAAAATAAAAACGATTGCTTTGGAAGAAGAAAGGGTTTCTCTTTCACTTTTCCGGAGGATTTCGAGTGCCTTTGGAGATAGAAAGTTCATAGGAATAGATGATGAAGTCAAGCAGATGAGGATGGTGAAAGACGAAGGAGAAATCGAGAAGATAAAACAGGCAATAGAGATCTCTGAAAGAGCCTTCCTCGAAACGGTACAGCAGATCAGAGCTGGAATGACAGAAAAAGAGATCGCCGCCCTTCTCGAATACACGATGAGAAAAGAAGGAGCGGAGGGTGTAGCTTTTGACACCATAGTGGCTTCAGGCTGTAGATCCGCTCTTCCGCACGGTAAAGCCTCAGACAAAGTAGTTGAGAGAGGGGACGTGATTGTGATAGACTTCGGGGCCACATATGAGAATTACTGTGCTGATATCACCCGTGTTGTTTCCATAGGAGAACCATCCGACGAAGTAAAGGAAGTTCACAGTATAGTTCTCGAAGCACAGGAAAGGGCTCTCAAAATTGCAAAGGCAGGTGTGACGGGAAAACTACTCGATTCGGTTGCCAGGGAATTTATACGGGAAAAAGGTTACGGTGAGTTCTTCGGACACAGTTTGGGACACGGGATAGGCCTCGAAGTACACGAAGGACCAGCCATCAGCTTCAGAAACGATTCTCCACTTCCAGAAAACGTTGTTTTCACCGTAGAACCCGGAATTTATCTGGAGGGAAAGTTCGGTATAAGGATAGAAGAAGACGTGGTCTTGAGAGAGCAGGGCTGTGAAATACTCACTACTCTGCCGAGATCTATCTTCGTCGTCTGAGATCTTCCAGTAGTTCTCTCACTGTCTTTCCCATCACAGGATGGATTAAATCTGGAGCTATCTCGCACAGTGGTTCCAGGACAAACGTTCTGTTGTGCGCATCGGGATGGGGTATTATGAGGTCTTCTTCGCTGAGAACAAGATCTTCATAGAATACGATGTCGAGATCGATGATCCTGGGTCCCCACCGTATCGTTCTCACTCTTCCCATGTTTCTCTCTATTTGAAGAAGTGTATTCAGCAGTTCGTGAGGAGAAAGCGGTGTTTGTGCGATACAAACCGCGTTCAGGAACCTCGGTTGATCTTCGTAGCCGTATGGTTCTGTTTCGATTATGGAGGATACTGTTTCTACCTTTATATTTCTCTTGTTCATTTCCTCAAGGGCTTTTTCTATGTTTCTCTGCCTGTCACCGAGGTTGCTTCCAAGCGCTATTACAACCTTTGCCAGAGTATCGCCTCCATCATTCTTATCACCCTCTTGTTAGGGAGGACATCGTGTACCCGAATTATATCTACTCCTTTCATCGTGCAGTACGCGGTGACCGCAAGAGTACCTTCAAGTCTTTCTTCGGGGGGCACGTTTCCCAAGGTGATTCCTATGAAAGATTTTCTTGAAGCACCTATGAGGATGGGCAGTTTTAACTCTTTGAATTCGTCGATCCTTCGAAGAATTTCGAGGTTGTCTTCGTATCTTTTTCCAAACCCGATACCCGGGTCCAGAACGATCTGGTTCACACCTTTTTCTTTTAGATACTCTATTTTTTCTGTGAAGTACTCTTTTATCTCCTTCACCACATCTTCGTAATGAGGATTTTCCTGCATCGTCTTTGGCGTTCCTTTTATGTGCATGAGAACGTAAGGGACGTTGTTTTCAGAAACTACTCTGACGATATCCGGTTCGAATTGATAACCGCTGATATCGTTTACGATATCCGCTCCGGCTTCAAGAGCTTTCAAAGCCACCCTCCACCTGTATGTATCTACGGAAATCGGAACGTCGGTTATCGATCTGATCGCTCTTATCACGGGAATCACTCTGTTCAATTCTTCTTCCTCATCGACGGGATCTGATCCGGGACGGGTGGACATTCCTCCCACGTCTATTATGTCAGCACCTTCTTCTATCATCTTCTTTGCGGTTTCCACCGCTTCGAGTACGCTCTGTTTTCTGGAATCAGCGAAGAAGGAGTCCGGTGTGACGTTTATTATTCCCATAACCATCGTTCTTCCAAACTCGATCTTTCTGTTCCATGGAGTTGTGTAAACCACGTTTCATCCCTCCAGAACGAAATCTCCTTTTTCTACACAGGCGAACGCGTTGTGGTTGTGTATGCTTTCCATACTTTCCACGTAGACTCTGTACCAGGTGATCCTTGGATCTTTCTCCAGTTCCAGTGCCACGTCTCTTGCCACATCCTCTACGAATCGGGGATTCTCATAAGCCTTTTCCGTGACGAACTTTTCGTCCGGCCTCTTCAGCAGGGTGTAAAGAGGAGAGCTTGCGTTTTTCTCCGCTATTTCTACCAGATCTTCGAACCAGATGAACTTTCTGGTTTTCACCGTTATTTCAACGAAAGCCCTCTGGTTGTGAGCACCGTAATCGCTGATCTCTTTTGAACACGGGCAGAGTGTGTGGACAGGTGTTCTGACCCCAATTTTGAAAGAAAAATTCTTCTCCTTTTCTGCTTCAACGAAGCAGTCCACTTTCAACGGCGATTTCTTTCTGGAAACAGGAGACTCCTTCCATATGAAGTAAGGAAAGTGGATCTCCAGGTGTGCCCTCTTTGCTTCCATGATTTCTATGAGATCATCCAGAATCTCTTCGAAGATTTGAGGAGTTATCACTTCCAGTTTGTTTAGAACTTCTATGAATCTGCTCATGTGTATTCCTCTTTTTTCACGGTGAAGATCCACTGAACAGCTAATCTGAGCAACGGTGGACTGGTATCCATCTTCCTTGAGAATCACCTTGAGAGGCCAGTGCAGATCTTTTATTCCCACCTTTTTTAGAGGGACCATCCTTGGGTCTTTTTCGTTCTGAACATCCTTCAAACCTTCTCACCCCTGTACACAACACCGCTCGTTTCTGTCTCCCACAGTTCTATCTCGTGGAGCCTGACACCGCGTTTTTCCATCTCTTTTGAGAGCTGATCCCATATCCATATCGCTACTCTTTCCGTGGTGGGCTGGTCGAACATGTCGTTGAGATACGAGTGATCGAGTTTAGAAATAACCAGCTCTTCGACGATTTTTTTCAGCTCGGCAAAATCCATGACCATCTCTTCTTCGTTCAGAGGACCTTCTATCTTAACAACGAGTCTGTAGGTGTGACCGTGGAGTCTCTCACACTTTCCAAGGTACCTGGTCAGATTGTGTGCGGCTTCAAAAGAAAATTTCTTCACCAAGATCAT

Protein sequences of DBSCAN-SWA_2

>NZ_CP003409|882699:890206|888227_889064_-|WP_004082506.1|DBSCAN-SWA
MVYTTPWNRKIEFGRTMVMGIINVTPDSFFADSRKQSVLEAVETAKKMIEEGADIIDVGGMSTRPGSDPVDEEEELNRVIPVIRAIRSITDVPISVDTYRWRVALKALEAGADIVNDISGYQFEPDIVRVVSENNVPYVLMHIKGTPKTMQENPHYEDVVKEIKEYFTEKIEYLKEKGVNQIVLDPGIGFGKRYEDNLEILRRIDEFKELKLPILIGASRKSFIGITLGNVPPEERLEGTLAVTAYCTMKGVDIIRVHDVLPNKRVIRMMEAILWQRL
>NZ_CP003409|882699:890206|884054_884273_-|WP_004082515.1|DBSCAN-SWA
MDKEKYVKGIEKALQKIAVRELKIVDISEIWIETALPKDLIIEILKEGKLNIPSGIETIKDGRDVIWKRSGS
>NZ_CP003409|882699:890206|889067_889847_-|WP_004082504.1|DBSCAN-SWA
MKDVQNEKDPRMVPLKKVGIKDLHWPLKVILKEDGYQSTVAQISCSVDLHREKRGIHMSRFIEVLNKLEVITPQIFEEILDDLIEIMEAKRAHLEIHFPYFIWKESPVSRKKSPLKVDCFVEAEKEKNFSFKIGVRTPVHTLCPCSKEISDYGAHNQRAFVEITVKTRKFIWFEDLVEIAEKNASSPLYTLLKRPDEKFVTEKAYENPRFVEDVARDVALELEKDPRITWYRVYVESMESIHNHNAFACVEKGDFVLEG
>NZ_CP003409|882699:890206|884330_884879_-|WP_004082513.1|DBSCAN-SWA
MKKLLVILLAVVAVGAFAFSLEDLKVSVFGNYNFVVSATSTTSDATAANYLDFGLDLTYPVAENMELGLGLGFAYLLGTDATPLFSVDATPSQNALDLFAVFKYSIELDRESRVVIRGFGGPSWPMAKFDFGKFGWVFGVGASYTRDFEGLVVGLGAGVEMRIYEKNNVIAIPVGGNFEINF
>NZ_CP003409|882699:890206|886715_887795_+|WP_038033248.1|DBSCAN-SWA
MDRSERLIQLISEKEADAFLIMNIENSARASSVYFSGFTGSFSIILISENTRLLITDSRYTVQAKQETDFEVREVKGGDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEGVAFDTIVASGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFGHSLGHGIGLEVHEGPAISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLREQGCEILTTLPRSIFVV
>NZ_CP003409|882699:890206|889843_890206_-|WP_004082502.1|DBSCAN-SWA
MILVKKFSFEAAHNLTRYLGKCERLHGHTYRLVVKIEGPLNEEEMVMDFAELKKIVEELVISKLDHSYLNDMFDQPTTERVAIWIWDQLSKEMEKRGVRLHEIELWETETSGVVYRGEKV
>NZ_CP003409|882699:890206|882699_883917_+|WP_039446211.1|transposase|DBSCAN-SWA
MSRYVIRTYKVPVPVELYPLCSELNRIAARIYNKTMSLVKKIKNKKGFWLSPNTAQKYILRWSSAIDIHTHSKQAMVQLYFQALNSYFVAVKTNPHAKPPYKRKNFLPFIWKNQAIKLLPDGKVKLSMGRNREPFVIPTTLPAGTTIRQAKLVYEAGRYYLHLAIEVKSEHKRGQSQKVMSVDVGILRPITCFDGSEVISYHGGVLNSILRYRNKRLADIQGALSRCQKGSRRYKKLSRAKRRVLYKTRNQINDVLHKITSHFIGLCVQKNISTIVVGDITNIRERTNGNDNFNQKLHQWAFRKLMSQIEYKAQIFGIEVVRISEAHTSKTCPVCGTQNRPSGRNYKCAGCGFEYHRDGVGAINIWKRYLGTKSQVVAGLAPARGVRFNPHLCGYGAISAPWKAA
>NZ_CP003409|882699:890206|887778_888243_-|WP_012310812.1|DBSCAN-SWA
MAKVVIALGSNLGDRQRNIEKALEEMNKRNIKVETVSSIIETEPYGYEDQPRFLNAVCIAQTPLSPHELLNTLLQIERNMGRVRTIRWGPRIIDLDIVFYEDLVLSEEDLIIPHPDAHNRTFVLEPLCEIAPDLIHPVMGKTVRELLEDLRRRR
>NZ_CP003409|882699:890206|884963_886703_+|WP_038033247.1|DBSCAN-SWA
MSPEKFLLRYAKKYWYLFLVGTVLSLILTVMEILPPRLMKTAIDKFLVESTLSSFERLNGIVITAFIILGIRVLSFLVGFASSYVTGYAGSKIVLLMRKDVFSHVISLPYSFFTGIPSGVVTTRIVNDTQNIQEFFSSVVTSVIMDVLLLGAVVVSLIQLSRELFGHVYYLLPLIVISILLFRYFDRRAYRKVRTNLARLNAFLAEHIAGINVIKILNLEKHKEKEFSTVATEYYRSLMEQLYVFGVFRPLMDFLYFLGVSLVLWYGARYIANKTLGFGSLYAFVSYLDMFFRPLRDLSEKYDIIQNSMASSEKILNLLKEEPEVIGNPNGPNEISKGRVRFENVWFSYDGKNWVLKDINLDFQPGKLYAIVGETGGGKSTLMSLINGLYIPQKGNIFIDEIPLLEYNLKLVRKQIAAVPQDVLLFSGTILDNIRLFDESIPEERVLEALKRVHALDIIERLPGGVYYEIVERGTTLSAGERQLIALARAVLFDAKIFILDEATSNVDVITETKIQEALEELSKDRTVIMIAHRLSTVKDVDEIVVVHNGRIVEKGNHYELLEKRGFYYNLYKIQFENA

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039446211.1|882699_883917_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A1P8DJG9	Virus_Rctr71	1.8e-17	30.0
WP_004082515.1|884054_884273_-	hypothetical protein	NA	NA	NA	NA
WP_004082513.1|884330_884879_-	outer membrane beta-barrel protein	NA	NA	NA	NA
WP_038033247.1|884963_886703_+	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	9.3e-44	29.4
WP_038033248.1|886715_887795_+	aminopeptidase P family protein	A0A0P0I8D7	Acinetobacter_phage	5.8e-20	34.3
WP_012310812.1|887778_888243_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	S4VNV0	Pandoravirus	8.0e-19	40.8
WP_004082506.1|888227_889064_-	dihydropteroate synthase	A0A0B5J4J5	Pandoravirus	2.3e-24	29.1
WP_004082504.1|889067_889847_-	GTP cyclohydrolase I FolE2	NA	NA	NA	NA
WP_004082502.1|889843_890206_-	6-carboxytetrahydropterin synthase QueD	J9PV91	Bacillus_phage	7.1e-15	34.4

Sequences of DBSCAN-SWA_3

Nucleotide sequences of DBSCAN-SWA_3

>NZ_CP003409|992855:1001455|DBSCAN-SWA
GATGATTGAGCAAGGAATTCTTTTGAGAATAGAAAATGTAACTAAAATTTTTAGAATTGGTGGAAGAATAACTGGTTCTAAGTTGGTGGCTGTTAGTAACGCTAATATCGAGATGGAAGGAAGTAAACCGGAAATTTTCGCACTTGCTGGTGAAAGTGGGAGCGGCAAAACTACTTTGGCTAGAATGATACTTGGACTTATAGAACCTTCATCGGGAAGGATTATTTTCAAAGGAAGAGATATAAATACCCTAAAAAACAGGAAAGATAAACTTTGGTTTAAAAGAGAAGTGCAGCCGATATTTCAAAATCCTTTTGAGGCTTTCAATCCTTTAAAAAAAGTAGAATCATATTTATTTGAGACCGCCAAAAATCTGCTTTTGTTAAAAACAAAGGATGAAGTTTTGGAGAATATATCGCAAGCTGTAAAAGCGGTAGGAATGAGTCTCGAGGAGATAAAGGATAGATATCCAAGCGAATTTTCAGGTGGTCAATTGCAGAGACTTTCAATAGCAAGAGCTTTGGTAGCAAAACCCTCACTTCTTATAGCAGATGAACCTGTTTCAATGGTTGATGCATCTCTTAGAATGTCCATTTTAAATCTTTTTAGGAATCTAAACAAAGATCACGGAGTGTCAATCATATATATCACGCATGATCTAGCGACTGCTTATTACGTAAGCGACAGGATCGCTATTATGTTTAGAGGAGTAATTGTGGAACTTGGACCAGTTGATGAAGTACTTTCCAAACCTTATCATCCCTACACGCAGCTGCTTTTAGAATCCATTCCAAAACCAGATCCAGATAGAAAATGGGAAAGGAGGATCAAACTTTCTGATATGGAAGTAAAAGAATATAGTCTTGTGGGATGTAAATTCGTTACTAGATGTCCTTATGCTAAAGAAATTTGTAAGAAGAAAGAACCACCATTTGTTCATGTGGAAAAGGGTAGATCAGTAAAGTGTTTTTTGTATTCTAATGGAACCATAAAAATCTCTGAGGAGGTGTGAATATATGCCATCTGTGAAGATCGGTATCATCGGTGCGGGGAGCGCGGTATTCTCTTTGAGGCTTGTGAGTGATCTTTGCAAAACGCCGGGACTCTCTGGCAGCACGGTCACCCTCATGGATATCGACGAAGAAAGACTCGACGCTGTTCTGACCATCGCGAAAAAATACGTTGAAGAAGTGGGAGCGGATCTGAAATTCGAAAAAACCATGAATTTAGATGACGTCATCATCGACGCGGATTTTGTGATAAACACAGCAATGGTGGGTGGCCATACCTACTTGGAGAAAGTCAGACAGATCAGTGAGAAATACGGCTACTACAGAGGAATAGACGCTCAGGAGTTTAACATGGTCTCCGACTACTACACCTTCTCCAACTACAACCAGCTCAAGTACTTCGTTGACATAGCAAGGAAGATAGAGAAGCTCTCCCCAAAAGCCTGGTACTTGCAGGCAGCGAACCCCGTTTTCGAGGGAACAACCCTTGTGACAAGAACGGTTCCCATAAAGGCAGTGGGATTCTGCCATGGACACTACGGCGTGATGGAGATCGTAGAGAAACTGGGGCTGGAAGAAGAAAAAGTAGATTGGCAGGTCGCAGGAGTGAACCACGGTATCTGGCTGAATAGGTTCAGATACAACGGGGAGAACGCGTATCCCCTCCTTGACAGGTGGATCGAGGAAAAATCAAAAGATTGGAAACCAGAGAACCCCTTCAACGACCAGCTCTCTCCCGCCGCGATAGACATGTACAGATTCTACGGTGTGATGCCCATCGGTGACACCGTGAGAAACTCTTCGTGGAGGTACCACAGGGATCTTGAGACCAAGAAGAAGTGGTACGGTGAACCCTGGGGAGGAGCAGATTCTGAAATAGGCTGGAAATGGTACCAAGACACGCTTGGAAAGGTCACGGAGATCACAAAGAAGGTGGCAAAGTTCATCAAAGAAAATCCGTCCGTGAGGCTCTCCGACCTTGGAAGTGTTCTGGGGAAAGACCTCTCAGAAAAGCAGTTTGTGCTCGAAGTGGAGAAAATTCTCGATCCAGAAAGAAAGAGTGGAGAGCAGCACATCCCATTCATCGATGCGCTGCTGAACGATAACAAGGCAAGATTCGTGGTGAACATACCAAATAAAGGTATCATTCACGGAATAGACGATGACGTGGTTGTTGAAGTCCCAGCCCTTGTGGACAAGAACGGAATCCATCCCGAGAAGATCGAACCACCGCTTCCAGATCGCGTGGTCAAGTACTACCTGAGACCCAGAATCATGAGGATGGAAATGGCTCTGGAGGCGTTCCTCACGGGGGACATAAGGATCATAAAAGAACTTCTCTACAGAGATCCAAGGACAAAGAGCGATGAACAGGTAGAAAAGGTGATCGAGGAGATCCTCGCACTTCCAGAAAACGAAGAGATGCGGAAACATTATCTGAAGAGATGAAAGGATCTGAAAGGGGCCTGAAAGGCCCCTTTATGTATAATATAATGTGTTGGAAAATCCAAAGAAGATAGTGGGGGAAAAGATGAGTTCTCTTAAAAAAGAACTTTTCTGGAAGATAACAATAGCTCTTATCGTTGCATTTGTTGTGATATGTGTTCTGAGTATCTTTCAGCTTTACTTTTCCGGAATAAAAACTGCCCGTGATTTCATAAGAAACGTGAACAATACTGTGACGTCCTTCATAAACGGATATTTCAGAAAATTCTATGTTGTTGATGTTTTGAGCCGCATTCCTGAAGTACGATATGCACCTTATCTGACCGATGAGGAAAGACGAAAAGTGTTGGAAATCTACAGAATTTTCCAGGAGGCAGACAGAGATATATACTATCTGTACTCGGGATACGAGAATGGACTTCTTCTGATCAACGATTACGAACCCGCAGAAGGATACGATCCAAGAGTAAGACCCTGGTACAGAGCCGCCCTCGAATCCCGACCTAAACCCACCGGTGGGATTCCCTACAGGGAGTTCAAAACAAAAGAGCTTTTGTTTTCCGTGAGCAAGGTGATCACGGACGACGAGGGAAACGTGACCGGTGTGATATCTGTTGAAACACTCCTGGAGAGACTTTTGAGTAATTTTCCTCATTCTTTTGATAACCATGAAACTGTGACAGAACCCCAACCACGCAAGCTATTCCCCTTCAGGGGGATAGGTTTGTTGTGGTGTTAATTATCTTATGATATAATTGAATGGGGTGATAGGTATGCATATCAAGAAGACAAGGTGGAGTCATTATAATCTGAACTATCATTTTGCGTGGATACCTAAATACCGCAGAAAAATCCTGGTCGGCTCCATAGCTGAAGAACTTGAACGAATACTCCGCAACACAGCAAAACAACACGGAATAGAAATACTGGCCCTCTCTATTCAGCCTGATCATGTTCATTTGTTTGTATCGGCGCCTCCAAGATTTTCACCGGCTGAGATAGCAAACCTGTTCAAGGGCGTTTCAGCGAGGAAACTGCTGGAGAAATTTCCAGAGCTTAGAACCAAAGAGGGCCTTTGGGCTCGAAGTTACTACGTTGGAACAGCCGGTAATGTTTCTGAAGAAACTATCAGGAGGTACATCGAGGAATGTCAAGACGTGTGATACGAACCTACAAACTCGCCGTACCAGGACACCTGAGTCAAACATGCGAAGAACTCAACCGCACTGCAGCAAGAATCTACAACAAAACGATGTCTCTTGTGCGAAAGATACACCAAAAGAAAGGCTTCTGGCTGTCCTGGCCCACCGCAGACAAATACATCCTCCGCTGGGCAGAAAACATCAAAATCCACGTCCACTCAAAGCAGGCATTTGTTCAGCTCTACTTTCAAGCCCTCAAAGGGTACTTCAAAGCAACCAAAAAGAATCCAGATGCAAAACCTCCCTACAAGAAAAAACGCTATCTGCCGTTCATATGGAAAGAAAGCGCTGTAAAACTTCTGCCAGACGGTACCCTAAGACTGTCTTTGGGCAAAGAACGAGAATCATTTGTTGTACAAACACCTCTCAAACCTCCCCTTCGCATCAAACAGGCAAGACTTGTCTTTGAAGATGGATACTATCTCCACCTTGCGATAGAGGTGGAGATTGAAGAGAAGAATGCTGGCTCTGGTGTTATGGCGGTCGACCTTGGAGTGCTCCGTCCCATTACGTGCTTTGATGGAAAAGAAGTCATCAGCTACCACGGAGGAGTCCTCAGCAGCACTCTTCGCTATCGAAACAAACGCCTTGCAAGTTTTCAGTCTGCCATAGCAGAGTGCAAGAAGGGATCAAGAAGGTACAACAAGCTTGTTCGTGCAAAGAAAAGAGTCCTGAGACGGCTCAGAAACCAGATCAACGACATCATGCACAAGATCACAAGTAACTTCATCGGACTGTGCCTCAGAAAGCAAATCAGAACCATCGTGATAGGAGACGTCACAGGGATCAGAGAAAGAGCGGACTACAGCGACAACGCGAACCAGAAGATCCACCAGTGGCAGTTCAGAAAACTCATCGAGATGATAAGGTACAAAGCAGAGCAGTTCGGAATCGAAGTGAAACTCATCTCAGAAGCGAATACAAGCAAGACGTGCCCTGTCTGTGGTGCAAAGAACAAGCCGAATGGAAGAAGATACCACTGCAAAGCCTGNGGTTTTGAGTATCACAGGGACGGAGTTGGAGCAATCAACATCTGGAAAAGGTATCCTGGCACAGGCCAGGTAGTAGCGGGCTTGGCCCCCGTCAGAGGTGTGAGGTTTCATCCACACCTCTGTGGCCATGGAGCATCTTTGGCTCCATGGAAGGTGGCCTGAGAGCCACCAAAAGTCCCATCCCCTTCAGGGGATTGGGAGGAGGTCAAGTGATTGCGAGGTGGGGTGGAGAAGAGTTTTTGATCCTCTGTCCTGAAACGAAGTTGAACGAAGCGGTGAGCCTCGCTGAGAGAATCAGGACTAAGATCGAGAAAGAAGTCTTTGAAAACGGCTTGAATGTAACCGTGAGCATCGGTGTTTGCGAAATGAAAGATCATGAGACAATAGACGATCTTCTCAAAGAAGCAGACGATAACCTCTATCTGGCAAAACAGCGTGGAAAAAACAGAGTGATCGGCAGATGAAGTTAAAAGATCTGTTCACCTTCTGGAAATAAATCCTTGATAGAATGGAGAAAACTGAATACAAAAGAAACGCTCTCGGGGCAGGGTGGAATTCCCGACCGGCGGTGAAAGCCCGCGAGCCCTCTCAGGAGGGTTGACCCGGTGGAATTCCGGGGCCGACGGTGAAAGTCCGGATGGGAGAGAGCGTGATGTGGAGATTATATGGGACCCGAGAGGGTCCCTTTTCTTTTACACAGGGAGGGTGTTGTATGTATGAAACTTTCATGAAAAGAGCGATAGAGCTTGCAAAGAAAGGACTTGGAAGGGTGAATCCCAACCCACCAGTTGGTGCGGTCGTTGTGAAAGACGGCAGGATAATCGCGGAGGGTTTTCATCCCTATTTTGGAGGTCCGCACGCTGAAAGGATGGCAATAGAAAGTGCAAGAAAGAAAGGAGAAGATTTACGAGGTGCAACTCTCATAGTTACCCTTGAACCCTGTGATCATCATGGAAAGACACCTCCATGCACGGATCTGATCATAGAAAGTGGAATAAAAACCGTTGTGATTGGAACAAGGGATCCAAATCCTGTTTCGGGAAACGGTGTGGAAAAATTCAGAAATCACGGTATTGAAGTGATAGAAGGTGTTTTGGAAGAAGAGGTGAAAAAGCTGTGTGAGTTTTTCATCACTTATGTGACAAAGAAAAGGCCGTTCGTTGCGCTGAAGTACGCGTCCACCTTAGATGGGAAAATAGCTGATCACAGAGGAGATTCCAAGTGGATCACAGACAAACTCAGATTCAAGGTTCACGAGATAAGAAACATCTACTCTGCTGTTCTCGTCGGTGCTGGAACGGTTTTGAAGGACAATCCTCAGCTAACCTGCAGACTGAAAGAAGGCAGAAATCCTGTGAGGGTGATCCTCGACAGAAAGGGTGTTTTGAGTGGGAAAGTGTTCAGAGTGTTCGAAGAAAACGCTCGGGTGATCGTTTTCACAGAAAGTGAAGAGGCGGAATATCCACCACACGTGGAGAAGGCCCTGAGCGATTGTTCTGTGGAGAGTATATTGAGAAATCTGTATGAAAGGGATATCGATTCTGTCTTGGTGGAAGGCGGATCGAAGGTGTTCAGTGAATTTTTGGATCACGCAGATGTGGTTTTTGGTTTTTATTCGACGAAGATTTTCGGAAAGGGGCTTGATGTCTTCTCCGGTTATCTGTCAGATGTTTCGGTTCCTCCGAAGTTCAAAGTGGTGAACGTGGAGTTTTCCGATTCGGAGTTTCTGGTGGAGATGAGACCGTGTTCACGGGAATAGTTCAGAAGGTGGAAAGAGGGCACATCAGAGGAGAGAGGATCTTCTTCAAAAGAACGTGGGAAGTGAAACTGGGAGAGAGTATAGCGGTGAACGGTGTGTGTCTGACTGTCTCCGGGCTTTCAGAAGAAGAGTACTGGTTCGATGTGGGTGAGGAAACGAGGAGGAGAACCAATCTTTTCGTTTCTCGTTTTTACAATCTTGAAAAATCTCTGGCTCTCGGCAGCAGAGTTGAAGGACACCTGGTAACAGGCCATGTGGACGGTACCGTCAGGTTTGTCGGAATGGAAAGGCGCGGAAACAGCTATTTCATGTTCTTTTCGATGCCGTCGGAAAGATGGGCGATCGTTCCAAAAGGTTCTATCACGTTGAACGGTATCAGCCTCACCGTCGTTGAAACTTCTCTGGACACGTTCAGTGTTCAGGTGATCCCACACACGTTCGAGAACACGAACCTCCAGTATCTGGTGCCCGGAGATCCCGTTAACTACGAGATCGATATCATCGCTCGCTACCTGAAAGGGGTGATAGACCGTGGAAGAACTGAGAGAGGCTTTTGAGGAAGGAAAGCCCGTCATTTTGATCGACAGAAATAGAGAGAACGAAGCAGATTTCGTTTTTCCCGCTCAACTGATCACCGAAGACGTTGTGAGCTTTTTCGTTACATACGGGAAGGGACTCTTCTGTGTTACAGCCGACGAGGAAGATCTTTTGAAGAGAGGGTTCGTAAAACTTTCCTCGAACTACGGAGCGAACTACTTCGTGCCGGTGGACTGGGGCACTGGCACGGGGATTTCAGCGTTGGAGAGGGCAGAAACGTGCAGAAAGCTTGCAGAAGGCAGGTATTTTCATGAGTTCAGATACCCGGGTCACGTCACGGTGATAGGAGGAATCGGTTTCCAGAGACGAAAAGGACACACGGAGGCATCTCTGGAAATTTCTGAGCTCGCGGGCTTCAGCCGTCACGCCGTGATCGTGGAAATTCTGGATGAGAAGGGAAATTCTCACAATTTGGATTATGTTTTGAAGCTCTCAGAAAAATTTTCCCTCCCCGTTCTGGAGATGGACGATGTCTGGCGTGAATTTGTGAAGAGAAAGCTTCTCATGAAGAAAAAAGCAGAAGCAACACTTCCAACGGATTTCGGTGTCTTCAAGGTTGTTTCTTTCGAAAACCACCTCGATGGCAAAGAACACTTCGCAATCGTTAAGGAACCCCTCGAAGATCCCGTTGCTGTGAGAATACACTCCGAATGCGTGACCGGGGATGTTCTCTCTTCTTTGAGGTGTGACTGCGGTTCACAGCTGGCGAATTTTCTCAGATACATGTCAGCTCACGGAGGTATCCTGATCTATTTGAGACAGGAAGGGAGAGGAATCGGCCTTTCGAACAAAATTGCAGCCTATTCTCTTCAGGACAAAGGTTTGGACACGGTGGAGGCAAACAGAGTTCTTGGTTTTTCTGAAGACGAAAGAGATTACGCACCGGCGGTGCAGATCTTGAAAGCCCTTGGCATCGAAAGGGTTCTTCTCTTCACCAACAACCAAAGAAAGACGGTTGGTCTTGAAAAATACGGGATCGAAGTTGTCGAAACGAAGAGACTGTACGGAAGAGTAACACCTCACAACAGGTTCTATCTTTCGACAAAAATGAAAAAGCTCGGACACGAACTCGAAGAAATCTTCAGGGAGGTGAATTCATGAAGGTTGTTCAGGGAGACTACAGAGGAGAAGGTTTGAAGATAGCCGTAGTCGTTCCTAGGTTCAACGACCTTGTCACTTCGAAACTCCTCGAGGGAGCGCTCGACGGGCTGAAAAGACACGGTGTCTCAGACGAGAACATAACGGTTGTGAGAATTCCGGGAAGTATGGAAGCGATATACACGCTCAAGAGACTCCTCGATCTCGGTGTGCATGATGCTATAATCGTTCTCGGTGCTGTGATAAGGGGAGAGACGTACCACTTCAACGTGGTGGCGAACGAGATAGGTAAAGCAGTGGCGCAGTTCAACATGACCTCTGATATTCCTATTGTTTTCGGCGTTCTCACCACGGACACCCTTGAACAGGCCCTCAACAGAGCCGGAGCAAAGAGTGGAAACAAAGGTTTTGAAGCAGCGATGGTAGCGATCGAAATGGCAAATCTCAGAAAGAGACTCAGGAGGGATGTTTTTGAATCTGATAGCAACGGCAGGTAA

Protein sequences of DBSCAN-SWA_3

>NZ_CP003409|992855:1001455|1000957_1001455_+|WP_004082371.1|DBSCAN-SWA
MKVVQGDYRGEGLKIAVVVPRFNDLVTSKLLEGALDGLKRHGVSDENITVVRIPGSMEAIYTLKRLLDLGVHDAIIVLGAVIRGETYHFNVVANEIGKAVAQFNMTSDIPIVFGVLTTDTLEQALNRAGAKSGNKGFEAAMVAIEMANLRKRLRRDVFESDSNGR
>NZ_CP003409|992855:1001455|999247_999820_+|WP_004082373.1|DBSCAN-SWA
MFTGIVQKVERGHIRGERIFFKRTWEVKLGESIAVNGVCLTVSGLSEEEYWFDVGEETRRRTNLFVSRFYNLEKSLALGSRVEGHLVTGHVDGTVRFVGMERRGNSYFMFFSMPSERWAIVPKGSITLNGISLTVVETSLDTFSVQVIPHTFENTNLQYLVPGDPVNYEIDIIARYLKGVIDRGRTERGF
>NZ_CP003409|992855:1001455|993870_995313_+|WP_038033159.1|DBSCAN-SWA
MPSVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAVLTIAKKYVEEVGADLKFEKTMNLDDVIIDADFVINTAMVGGHTYLEKVRQISEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPVFEGTTLVTRTVPIKAVGFCHGHYGVMEIVEKLGLEEEKVDWQVAGVNHGIWLNRFRYNGENAYPLLDRWIEEKSKDWKPENPFNDQLSPAAIDMYRFYGVMPIGDTVRNSSWRYHRDLETKKKWYGEPWGGADSEIGWKWYQDTLGKVTEITKKVAKFIKENPSVRLSDLGSVLGKDLSEKQFVLEVEKILDPERKSGEQHIPFIDALLNDNKARFVVNIPNKGIIHGIDDDVVVEVPALVDKNGIHPEKIEPPLPDRVVKYYLRPRIMRMEMALEAFLTGDIRIIKELLYRDPRTKSDEQVEKVIEEILALPENEEMRKHYLKR
>NZ_CP003409|992855:1001455|995458_996049_+|WP_029683532.1|DBSCAN-SWA
MICVLSIFQLYFSGIKTARDFIRNVNNTVTSFINGYFRKFYVVDVLSRIPEVRYAPYLTDEERRKVLEIYRIFQEADRDIYYLYSGYENGLLLINDYEPAEGYDPRVRPWYRAALESRPKPTGGIPYREFKTKELLFSVSKVITDDEGNVTGVISVETLLERLLSNFPHSFDNHETVTEPQPRKLFPFRGIGLLWC
>NZ_CP003409|992855:1001455|996083_996473_+|WP_008194358.1|transposase|DBSCAN-SWA
MHIKKTRWSHYNLNYHFAWIPKYRRKILVGSIAEELERILRNTAKQHGIEILALSIQPDHVHLFVSAPPRFSPAEIANLFKGVSARKLLEKFPELRTKEGLWARSYYVGTAGNVSEETIRRYIEECQDV
>NZ_CP003409|992855:1001455|997650_997968_+|WP_038033145.1|DBSCAN-SWA
MEGGLRATKSPIPFRGLGGGQVIARWGGEEFLILCPETKLNEAVSLAERIRTKIEKEVFENGLNVTVSIGVCEMKDHETIDDLLKEADDNLYLAKQRGKNRVIGR
>NZ_CP003409|992855:1001455|996457_997666_+|WP_039446217.1|transposase|DBSCAN-SWA
MSRRVIRTYKLAVPGHLSQTCEELNRTAARIYNKTMSLVRKIHQKKGFWLSWPTADKYILRWAENIKIHVHSKQAFVQLYFQALKGYFKATKKNPDAKPPYKKKRYLPFIWKESAVKLLPDGTLRLSLGKERESFVVQTPLKPPLRIKQARLVFEDGYYLHLAIEVEIEEKNAGSGVMAVDLGVLRPITCFDGKEVISYHGGVLSSTLRYRNKRLASFQSAIAECKKGSRRYNKLVRAKKRVLRRLRNQINDIMHKITSNFIGLCLRKQIRTIVIGDVTGIRERADYSDNANQKIHQWQFRKLIEMIRYKAEQFGIEVKLISEANTSKTCPVCGAKNKPNGRRYHCKAXGFEYHRDGVGAINIWKRYPGTGQVVAGLAPVRGVRFHPHLCGHGASLAPWKVA
>NZ_CP003409|992855:1001455|992855_993866_+|WP_012896045.1|DBSCAN-SWA
MIEQGILLRIENVTKIFRIGGRITGSKLVAVSNANIEMEGSKPEIFALAGESGSGKTTLARMILGLIEPSSGRIIFKGRDINTLKNRKDKLWFKREVQPIFQNPFEAFNPLKKVESYLFETAKNLLLLKTKDEVLENISQAVKAVGMSLEEIKDRYPSEFSGGQLQRLSIARALVAKPSLLIADEPVSMVDASLRMSILNLFRNLNKDHGVSIIYITHDLATAYYVSDRIAIMFRGVIVELGPVDEVLSKPYHPYTQLLLESIPKPDPDRKWERRIKLSDMEVKEYSLVGCKFVTRCPYAKEICKKKEPPFVHVEKGRSVKCFLYSNGTIKISEEV
>NZ_CP003409|992855:1001455|998216_999263_+|WP_038033144.1|DBSCAN-SWA
MYETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYFGGPHAERMAIESARKKGEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNPVSGNGVEKFRNHGIEVIEGVLEEEVKKLCEFFITYVTKKRPFVALKYASTLDGKIADHRGDSKWITDKLRFKVHEIRNIYSAVLVGAGTVLKDNPQLTCRLKEGRNPVRVILDRKGVLSGKVFRVFEENARVIVFTESEEAEYPPHVEKALSDCSVESILRNLYERDIDSVLVEGGSKVFSEFLDHADVVFGFYSTKIFGKGLDVFSGYLSDVSVPPKFKVVNVEFSDSEFLVEMRPCSRE
>NZ_CP003409|992855:1001455|999794_1000961_+|WP_038033143.1|DBSCAN-SWA
MEELREAFEEGKPVILIDRNRENEADFVFPAQLITEDVVSFFVTYGKGLFCVTADEEDLLKRGFVKLSSNYGANYFVPVDWGTGTGISALERAETCRKLAEGRYFHEFRYPGHVTVIGGIGFQRRKGHTEASLEISELAGFSRHAVIVEILDEKGNSHNLDYVLKLSEKFSLPVLEMDDVWREFVKRKLLMKKKAEATLPTDFGVFKVVSFENHLDGKEHFAIVKEPLEDPVAVRIHSECVTGDVLSSLRCDCGSQLANFLRYMSAHGGILIYLRQEGRGIGLSNKIAAYSLQDKGLDTVEANRVLGFSEDERDYAPAVQILKALGIERVLLFTNNQRKTVGLEKYGIEVVETKRLYGRVTPHNRFYLSTKMKKLGHELEEIFREVNS

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012896045.1|992855_993866_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	9.6e-17	33.2
WP_038033159.1|993870_995313_+	alpha-glucosidase/alpha-galactosidase	NA	NA	NA	NA
WP_029683532.1|995458_996049_+	chemotaxis protein	NA	NA	NA	NA
WP_008194358.1|996083_996473_+|transposase	IS200/IS605 family transposase	W0UUZ0	Sulfolobus_monocaudavirus	8.4e-38	56.8
WP_039446217.1|996457_997666_+|transposase	IS200/IS605 family element transposase accessory protein TnpB	A0A0A8WI33	Clostridium_phage	1.6e-39	32.4
WP_038033145.1|997650_997968_+	GGDEF domain-containing protein	A0A127AWB9	Bacillus_phage	1.4e-06	41.0
WP_038033144.1|998216_999263_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	A0A2H4PQS8	Staphylococcus_phage	1.5e-52	37.2
WP_004082373.1|999247_999820_+	riboflavin synthase	A0A2I2L4R9	Orpheovirus	8.6e-23	35.5
WP_038033143.1|999794_1000961_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	A0A2H4PQS2	Staphylococcus_phage	2.3e-67	37.9
WP_004082371.1|1000957_1001455_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	2.2e-30	44.7

Sequences of DBSCAN-SWA_4

Nucleotide sequences of DBSCAN-SWA_4

>NZ_CP003409|1150735:1158347|DBSCAN-SWA
GATGAAGATAACGCTGAATAGCGTTTCCTTCAGATACAACGGAGACTACGTTTTGAAGGACGTGAACGCCGAGTTCGAAACGGGGAAGATCTACGTTGTGGTGGGAAAAAACGGCTCCGGGAAGACCACCCTTTTGAAGATCCTCGCAGGACTCCTGGAAGCCGAGGGAGAGATTTTCCTGGACGGTTCACCAGCGGATCCGTTTCTTTTGAGAAAGAACGTGGGCTACGTCTTCCAGAATCCGTCTTCACAGATCATAGGTGCCACCGTGGAGGAGGACGTGGCCTTTTCGCTGGAGATAATGGGGCTCGACGAGAGCGAAATGAGAAAGAGAATAAAGAAGGTCCTGGAACTGGTGGGACTCTCCGGTCTCGAAAAGGAAGACCCGCTGAACCTTTCAGGAGGCCAGAAACAGAGGCTTGCGATTGCCTCGATGCTCGCTCGGGATACACGCTTTCTCGCTTTAGATGAACCGGTTTCCATGCTGGACCCTCCCTCTCAGAGGGAGATATTTCAGGTGCTCGAGAGCCTCAAGAATGAAGGAAAGGGAATAATACTGGTAACACACGAGCTGGAGTATCTGGATGATATGGACTTCATACTCCACATCTCGAATGGTACAATCGATTTCTGTGGAAGCTGGGAGGAATTCGTGGAGAGAGAGTTCGACGATGTGGAGATTCCTTTCAAGTGGAAACTCTGGAAGAAATGTGGGAAGATAAACCTGTGGGAGGATCGGTATGAGAATTCTGGTAACCAACGACGACGGGATACAGTCTAAGGGGATCATCGTCCTCGCAGAGCTTCTTTCCGAGGAACACGAGGTTTTCGTGGTGGCTCCAGATAAAGAAAGGAGCGCAACTGGTCACAGCATCACCATACACGTTCCGCTCTGGATGAAGAAGGTTTTCATCTCAGAGAGGGTGGTTGCGTACTCCACCACAGGAACGCCCGCGGACTGTGTGAAACTCGCCTACAACGTGGTCATGGATAAAAGGGTCGATCTCATCGTGAGTGGTGTGAACAGGGGGCCCAACATGGGCATGGATATTCTCTACTCTGGGACGGTCTCGGGTGCGATGGAAGGTGCCATGATGAACATTCCTTCGATTGCCATATCGAGTGCTAACTACGAGAGTCCCGATTTCGAAGGAGCGGCACGTTTTTTGATCGACTTTCTGAAAGAATTCGACTTCTCACTCCTCGATCCTTTCACCATGCTGAACATAAACGTACCTGCTGGTGAGATAAAGGGATGGAGATTCACAAGGCAGAGCAGAAGAAGGTGGAACGATTACTTCGAAGAGAGAGTCTCACCCTTTGGGGAGAAGTACTACTGGATGATGGGAGAGGTCATCGAAGACGACGATAGAGACGATGTTGACTACAAGGCGGTTAGAGAAGGGTACGTCTCCATCACTCCGATACATCCCTTTCTCACGAACGAACAGTGTCTGAAGAAGTTAAGGGAGGTGTACGACTGATGTACAGAATAAGAGTCTTTGGAGATCCCGTCTTGAGAAAGAGGGCAAAACCCGTTACAAAGTTCGACGAGAACCTGAAAAAGACCATAGAAAGAATGATAGAGACGATGTATCACTACGACGGTGTGGGACTCGCGGCACCGCAGGTTGGAATATCTCAGAGGTTCTTCGTCATGGACGTTGGAAATGGTCCGGTTGCCGTGATAAATCCGGAGATTCTTGAAATCGATCCAGAAACTGAAGTAGCAGAAGAGGGGTGCCTCAGCTTTCCCGAGATCTTCGTCGAGATAGAAAGGAGCAAAAGAATAAAGGTCAAATACCAGAACACAAGGGGAGAATACGTGGAAGAAGAACTGGAAGGTTACGCTGCAAGGGTTTTTCAGCACGAGTTCGATCATCTGAACGGAGTTTTGATCATCGATCGAATCAGTCCAGCGAAGCGCCTTTTGCTCAGAAAGAAACTCATGGACATAGCAAGAACCGTTAAGAGATGAGGAGGGAAGAGACGTGAAAAGGTGGTTGCTTTTGATTTCCTTGATGGTGTTCTCCGCGGTTGTGTTTTCGTTCTCCGCACCCGTTGATTCTCCAAGGGTTTCGGCAACTTTCGGTGAGTACAGAGGGAGTGGAAACAGAGGACCTCATTTTCACATGGGAATCGACTTTTCTACGGGATTGAAAGAAGGAGTTCCCATATACGCCTCCGAGAGAGGCTGGCTCGTCAGAATCGAAATAGACGAGGACGATATATACGGCTACACAGTGGTTCTGGAACACGAGAATGGATACAGAACGCTCTACGCCCATCTGAGCAGATTCTCGAAAAAACTGGAAACGGTAGCGAGTTCTTTGAAACAAGAGTTCGGGAATGTGAGGATCGTCGTGAACTTCCCTGAGAAAGAGATCTGGTTCGAAAAAGGTGAAGTCGTCGGATACTCAGGAACCACAGGAGAGGCACCCATTCCCCACGCACACTTCGAGATAAGAGACAGGAACGAGGAAGTTTCCTACGACCCTTCGACTTTCTTGAACCTTCCAAAACCCGTGGATGAGGATATTGTTCTGGAAAAAATAAAGATAGGAGACAGTGTGTACGATTTCGTCGAGGGGAGGACGTACCCGTTCAGTGGAAATTTCCCGGATCTTGCGATCAAAGCCTATTCGAAAGGGTTCAACAACACGTTAGGACTCAAGAAGATCTCACTCCTTTTGGAAGGTGAAGAGATCTATCAGATCTCTTTCGATCAGATTCCCTGGTCCGAGTTCACAAACGTCTGGGGAGTGTACGATAGGAAGTCCGTTTCGGCCGCGTACAGGTTTGAGCTCTGGTACAAATTGTTCCCCGAAACGTTTTCTTCGATGATAAAGGTGAACAAATTTCCCGAATTGGGAAAAGCCCCAGATTTTGCCAAATACACAGTCGTTATTGAAGATATCTGGGGCATGAAGAAGGAATTTTCTTTCTACCTGCAGCGGAGGTGAAATCATGCTCTTTCTGTTTTTTGGGAAAAAAAAGAAAGACCTGAACAAAAATCCGTTTTACAGGGAAAAAGGGGCTCTTGTAATTTACATAAAATGTGACAGATGTGGGGAAGTCTTCAGAAGTCATCTGAGAACGGGGTACGATTTCATCGTGGATTACGATAACCCGGGCGTTCCTTACAAGATAGACAAGCTCTATGTGGGTTCAAAATGTCCCAACAAGATACATCTTGTTGCGACCTTCACGTCTTCTTATAAACCGGTGTCTGTTTCTCTGGAGGGTGGAACTTTTATAACCCGAGAAGAATTTGAAGAATCGCAAAAACAATGATGTAACCTTTTTTAAGAAAGATTGTGATAAACTATCAAGGCTGTTATAAGATCAGCGAAAGGAGGATGGGAGATGAGAAGACTTTTCACCAGCGAGAGCGTAACAGAAGGGCATCCGGACAAAATCGCCGACCAGATTTCCGACGCCATACTCGACGCCATGCTCGAGCAGGATCCAAGGAGCAGGGTTGCCGTTGAAACACTCGTAACAACAGGGCTTGTCATCATCGCGGGAGAGGTTACCACCAGAGCTTATGTTGAGATCCCCGATATAGCGAGAAAGACCATTCTGGAGATAGGATACACGAGGGCGAAGTACGGATTCGATGGGGAAACCTGCGGAGTGCTCACCAGCATCCACAGTCAGTCTCCTGACATAGCTCTCGGTGTAGACAAGGCGCTCGAGGTCAAAACAGGAGAGGAAGTGGCTGACGAGTTCGAGGCGCTCGGAGCTGGCGACCAGGGAATCATGTTCGGCTACGCCACCAACGAAACCCCTGAGTACATGCCCCTTCCCATAACTCTCGCCCACAAACTCGCCATGAGACTCGCTGAGGTCAGAAAGAACGGGACTCTTCCTTTCCTCAGGCCAGATGGAAAGACACAGGTGACCATAGAATACGAGGACGACAAACCAGTCCGTGTCGACACAGTGCTTATTTCAACTCAGCACGATCCGGATATCTCCCAGGCAGATCTGAGAGAGGCGATAATAGAACACGTCATAAATCCTGTGATTCCAGAACAGTACAGGGACGACAAAATGAAGATACTGGTGAATCCAACAGGAAGATTCGTTCTTGGAGGTCCCATGGCCGACACGGGGCTCACAGGGAGAAAGATCATCGTTGACACTTACGGTGGTTGGGTACCCCACGGCGGAGGGGCGTTCAGCGGAAAAGATCCCACAAAGGTTGACAGATCGGCTCACTATATGGCAAGATATGTAGCGAAGAACGTTGTGGCTGCAGGTCTTGCGGACAAGTTCCTCATACAGCTTTCTTACGCTATAGGTGTCGCGAAACCCGTTTCCATAATGATCGACACGTATGGAACCGCGAAGGTGGATGAAGACAAACTTCTCAAGGTGATCACTGAACTGTTCGATTTCAGACCGGGTGCGATCATAAAGAAACTGAATCTTTTGAGACCTATTTACAGGAAAACAGCCGCCTACGGTCACTTTGGAAGGAACGAAGAGGAATTCACATGGGAGAAACTCGACATGGTAGATGAGTTGAAAAGAGCTTTCAATATGTAAGGGAGGGATCAAGTAGTGCCGAATATCAAATCTGCAAAGAAAAGGGTCAGAGTTTCTGAAAAGAGAAGACTCAGAAACAAGGCTTACAAGACTTTCTTCAAGAACAGAATAAAAGAGGTTCTCAAAGCTATCGAGAACAAAGAACCGAAAGAAGTCGTTCTTGAACTCACCAGGAAAGCGCAGGCTGCCATAGACAAAGCCGTTTCCAAGGGAGTCATCCACAAGAATCAGGGTGCGAGAAGAAAAGCGAGACTTTTCGAGAAGGTGAACGAATACCTGAGAACTCTCGAAACAATTCAGGAGTGAATTTCTTGCTGTTTTTGAAAGCTGGCCCCCTTGCGGGGCATTTCTGATTTTAAAGGGAGGGATTGTGCGTGGAGGGGTTGATAGGGGATTTCTTCAGGTTGATTATTAAAAACTGGTATTTTTCCCTACCCGCCGCTCTTTTTCTCATGTTCGCTGCCAGGTATGTTGAACACATAGCTTTTGCGGTGATCGGTTTTGTAATCGGTATCAACTTCGTGTTTCCTCTTCTTTCGAATATCGAATTTCTCAAATCCTATCTCACGAATGAGAATGTGAAGGTTGTTGTACTGGTGGCAACAGGTGTTTTAACCGCAGTTGTGCTTTACGTTCTGTACAGATACCTGGTGTTCCTCGCTGCTCTCGTCACCGTGACCTTCGTCGCTTACTACGTTATAAACTTTCTGGTGAGTTCTTTTAACCTTCAAAGTGTTCAGTACATGAACTGGATAACGTTTGGACTTTCCGTTTTCATTGGACTTTTAGCTGGATTGACTGCTTACCGCAAGGAAAAAGAATTTGCGAGAATCCTCTCAGTTGTGGTGGGTGCTGCGATTTTTTCAGTGCTGGTTTTGTTCTACCTTTCCGGACTCTTTGGTGTGGAGTTTAAACCGGAATCTCTCTTTGCGAACAAGATGATGATCTTCTTCTACGTGTCTCTTTTTCTGCTCTTTCTGTTTCTTTCTGCATGGTTCACTTTCAGGAAAAGATCCTATCAAAAAACTAGTTCGTAAATGTTAAAATAGTATAGAAACCAGATCTGAAAGGAGGTGTACCCCCTCGGGGGATCGAAGATGGCGAAAAAGAAGATTCTGGTGGTTGACGACGACCCGGCAATTCTCGAGCTGGTAGGATACAACCTTTCCAAAGAAGGATACGAGGTGCTCAAGGCTTACGATGGAGAAGAAGCACTCAAAATTGCCAACGACGAGGATGTGGATATGTTCATAGTGGATATCATGCTTCCTGGAATTGACGGTTTCGAGCTGGTCAGGAAGATCAGGGCTATAGAGAAATACAAGAACACCCCCGTGATCTTCCTGAGCGCGAAGGGAGAAGAATTCGACAAGGTGCTTGGGCTGGAGCTCGGTGCGGACGACTACATCACCAAGCCGTTCAGCGTGAGAGAGCTTCTTGCGAGGGTGAAGGCTATATTCAGAAGGCTTTCCACCGCTACTCAGAGCAAGGAAGAAAGGCCTAAGAAGATCATAGCCAAGGATCTTGAAATCGATGTGGAAAAGTACGAAGTGAAAGTGAGAGGGAAAAAAGTGAACCTCACTCCTCTCGAATTTGAACTGCTCCGATTCCTCGCGGAAAACGAAGGAAAAGTTTTCAGCAGGGATGTTCTCCTTGATAAACTCTGGGGATACGATTATTACGGAGATACGAGAACTGTAGATGTTCACATAAGAAGGCTGAGAACGAAGATAGAAGAAGATCCTTCGAATCCGAAATACATAATCACTGTGAGAGGAAAGGGATACAAATTCAGGGATCCCGGAAAGGAAGACTGATCAATGAGTATTTTCCTGTTTGTCGTAGTAGCTGTTCTATTCGTCCTGCTCTTTTTGGTGTTCAGGAAGCGCCTATCTGAGTACAGAATCTTCATCGAAAAGCTGTCAGATATGCTGGGGGAAAAGGACGTTCCCCCGCTTTATCTTTTCGAGAGACTGAAAAAGTACGTAGACAATCTGAAAGAAACAATTTCGCGTGTTGAGGTGAACAGAGACAACTTCCTCACGATTTTGAGCAGCCTCAGTGAACCCATATTCATTCTGGATCGAGAGGGGAAGATCACGTTTTTGAACGAAATTGCCCGTGAACTTGTGCAGGGCAGGATCAATCCCGAAGGAAGGCCTTATTACGAAATATTTGAAGATTACTACATAAACGAGATGGTGGAAGAGACCATCAAAAGTGAAGAACCGCAGGAAGGAACTCTCGTTACCTATGTTGGTAACGAAAAGAAATACTTCCATGTGAAGGTGATACCCGTCGAGCTGAAGAGCGGCGACAAAATCTTTGTCATTCTCTTCCACGATGTGACCAAGGAAAGAAAGCTCGACGAGATGAGAAGAGAATTCATAGCCACAGTTTCACACGAACTCAGAACTCCCCTCACTTCCATCCACGGTTATGCGGAAACGCTCCTTGAAGATGATCTGGAGGACAAAGAACTGGTCAAAAGGTTTTTGAAGATCATAGAGGAAGAATCCGCTCGAATGACACGCCTCATCAACGATCTTCTCGACCTTGAGAAAATGGAAGAAAGTGAAGTCAATTTTGAAATGAAAGATGTGGATCTGTGTGAAGTGGTAGAATACGTTTACAAAATCATACAGCCAACAGCTGAGGAGAACGAAGTGGATCTCATCGTTGAATGCGAGGATGTTGTGGTTAAGGGAAACAAAGAAAGGCTGATTCAGATGCTCCTGAATCTTGTGGACAACGCTGTTAAATACACATCTTTGAAGGAAAAAGGAGAAAAGAAGGTCTGGGTGAGGGCCTACGATACACCGGACTGGGTGGTTGTTGAGGTAGAAGACACGGGACCTGGAATACCTAAGGAATCCCAGAGCAGAATCTTCGAAAAGTTCTACAGAGTTGATAAAGCGCGTTCCAGAAAGATGGGCGGAACAGGTTTGGGTCTCACGATAGTGAAAACGATCGTTGACAAGCATGGAGGAAAGATAGAGGTTGAGAGTGAGATCAACCAGGGAACGGTGATGAGAGTTTTCCTGCCGAAAAGAGGGTGA

Protein sequences of DBSCAN-SWA_4

>NZ_CP003409|1150735:1158347|1157108_1158347_+|WP_038033062.1|DBSCAN-SWA
MSIFLFVVVAVLFVLLFLVFRKRLSEYRIFIEKLSDMLGEKDVPPLYLFERLKKYVDNLKETISRVEVNRDNFLTILSSLSEPIFILDREGKITFLNEIARELVQGRINPEGRPYYEIFEDYYINEMVEETIKSEEPQEGTLVTYVGNEKKYFHVKVIPVELKSGDKIFVILFHDVTKERKLDEMRREFIATVSHELRTPLTSIHGYAETLLEDDLEDKELVKRFLKIIEEESARMTRLINDLLDLEKMEESEVNFEMKDVDLCEVVEYVYKIIQPTAEENEVDLIVECEDVVVKGNKERLIQMLLNLVDNAVKYTSLKEKGEKKVWVRAYDTPDWVVVEVEDTGPGIPKESQSRIFEKFYRVDKARSRKMGGTGLGLTIVKTIVDKHGGKIEVESEINQGTVMRVFLPKRG
>NZ_CP003409|1150735:1158347|1154100_1155288_+|WP_004082170.1|DBSCAN-SWA
MRRLFTSESVTEGHPDKIADQISDAILDAMLEQDPRSRVAVETLVTTGLVIIAGEVTTRAYVEIPDIARKTILEIGYTRAKYGFDGETCGVLTSIHSQSPDIALGVDKALEVKTGEEVADEFEALGAGDQGIMFGYATNETPEYMPLPITLAHKLAMRLAEVRKNGTLPFLRPDGKTQVTIEYEDDKPVRVDTVLISTQHDPDISQADLREAIIEHVINPVIPEQYRDDKMKILVNPTGRFVLGGPMADTGLTGRKIIVDTYGGWVPHGGGAFSGKDPTKVDRSAHYMARYVAKNVVAAGLADKFLIQLSYAIGVAKPVSIMIDTYGTAKVDEDKLLKVITELFDFRPGAIIKKLNLLRPIYRKTAAYGHFGRNEEEFTWEKLDMVDELKRAFNM
>NZ_CP003409|1150735:1158347|1152725_1153697_+|WP_004082174.1|DBSCAN-SWA
MKRWLLLISLMVFSAVVFSFSAPVDSPRVSATFGEYRGSGNRGPHFHMGIDFSTGLKEGVPIYASERGWLVRIEIDEDDIYGYTVVLEHENGYRTLYAHLSRFSKKLETVASSLKQEFGNVRIVVNFPEKEIWFEKGEVVGYSGTTGEAPIPHAHFEIRDRNEEVSYDPSTFLNLPKPVDEDIVLEKIKIGDSVYDFVEGRTYPFSGNFPDLAIKAYSKGFNNTLGLKKISLLLEGEEIYQISFDQIPWSEFTNVWGVYDRKSVSAAYRFELWYKLFPETFSSMIKVNKFPELGKAPDFAKYTVVIEDIWGMKKEFSFYLQRR
>NZ_CP003409|1150735:1158347|1156385_1157105_+|WP_011943665.1|DBSCAN-SWA
MAKKKILVVDDDPAILELVGYNLSKEGYEVLKAYDGEEALKIANDEDVDMFIVDIMLPGIDGFELVRKIRAIEKYKNTPVIFLSAKGEEFDKVLGLELGADDYITKPFSVRELLARVKAIFRRLSTATQSKEERPKKIIAKDLEIDVEKYEVKVRGKKVNLTPLEFELLRFLAENEGKVFSRDVLLDKLWGYDYYGDTRTVDVHIRRLRTKIEEDPSNPKYIITVRGKGYKFRDPGKED
>NZ_CP003409|1150735:1158347|1155303_1155594_+|WP_038033063.1|DBSCAN-SWA
MPNIKSAKKRVRVSEKRRLRNKAYKTFFKNRIKEVLKAIENKEPKEVVLELTRKAQAAIDKAVSKGVIHKNQGARRKARLFEKVNEYLRTLETIQE
>NZ_CP003409|1150735:1158347|1155662_1156325_+|WP_004082166.1|DBSCAN-SWA
MEGLIGDFFRLIIKNWYFSLPAALFLMFAARYVEHIAFAVIGFVIGINFVFPLLSNIEFLKSYLTNENVKVVVLVATGVLTAVVLYVLYRYLVFLAALVTVTFVAYYVINFLVSSFNLQSVQYMNWITFGLSVFIGLLAGLTAYRKEKEFARILSVVVGAAIFSVLVLFYLSGLFGVEFKPESLFANKMMIFFYVSLFLLFLFLSAWFTFRKRSYQKTSS
>NZ_CP003409|1150735:1158347|1151474_1152218_+|WP_038033064.1|DBSCAN-SWA
MRILVTNDDGIQSKGIIVLAELLSEEHEVFVVAPDKERSATGHSITIHVPLWMKKVFISERVVAYSTTGTPADCVKLAYNVVMDKRVDLIVSGVNRGPNMGMDILYSGTVSGAMEGAMMNIPSIAISSANYESPDFEGAARFLIDFLKEFDFSLLDPFTMLNINVPAGEIKGWRFTRQSRRRWNDYFEERVSPFGEKYYWMMGEVIEDDDRDDVDYKAVREGYVSITPIHPFLTNEQCLKKLREVYD
>NZ_CP003409|1150735:1158347|1150735_1151515_+|WP_004082181.1|DBSCAN-SWA
MKITLNSVSFRYNGDYVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLEAEGEIFLDGSPADPFLLRKNVGYVFQNPSSQIIGATVEEDVAFSLEIMGLDESEMRKRIKKVLELVGLSGLEKEDPLNLSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQVLESLKNEGKGIILVTHELEYLDDMDFILHISNGTIDFCGSWEEFVEREFDDVEIPFKWKLWKKCGKINLWEDRYENSGNQRRRDTV
>NZ_CP003409|1150735:1158347|1153701_1154028_+|WP_011943663.1|DBSCAN-SWA
MLFLFFGKKKKDLNKNPFYREKGALVIYIKCDRCGEVFRSHLRTGYDFIVDYDNPGVPYKIDKLYVGSKCPNKIHLVATFTSSYKPVSVSLEGGTFITREEFEESQKQ
>NZ_CP003409|1150735:1158347|1152217_1152712_+|WP_004082176.1|DBSCAN-SWA
MYRIRVFGDPVLRKRAKPVTKFDENLKKTIERMIETMYHYDGVGLAAPQVGISQRFFVMDVGNGPVAVINPEILEIDPETEVAEEGCLSFPEIFVEIERSKRIKVKYQNTRGEYVEEELEGYAARVFQHEFDHLNGVLIIDRISPAKRLLLRKKLMDIARTVKR

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004082181.1|1150735_1151515_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	2.4e-23	35.6
WP_038033064.1|1151474_1152218_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	1.4e-36	34.3
WP_004082176.1|1152217_1152712_+	peptide deformylase	A0A067XQZ3	Caulobacter_phage	1.8e-21	44.7
WP_004082174.1|1152725_1153697_+	M23 family metallopeptidase	A0A7K9	Microcystis_virus	5.1e-07	32.0
WP_011943663.1|1153701_1154028_+	hypothetical protein	NA	NA	NA	NA
WP_004082170.1|1154100_1155288_+	methionine adenosyltransferase	A0A2H4PQS6	Staphylococcus_phage	2.0e-138	65.3
WP_038033063.1|1155303_1155594_+	30S ribosomal protein S20	NA	NA	NA	NA
WP_004082166.1|1155662_1156325_+	hypothetical protein	NA	NA	NA	NA
WP_011943665.1|1156385_1157105_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.5e-43	44.3
WP_038033062.1|1157108_1158347_+	PAS domain-containing protein	W8CYF6	Bacillus_phage	3.3e-35	36.7

Sequences of DBSCAN-SWA_5

Nucleotide sequences of DBSCAN-SWA_5

>NZ_CP003409|1472936:1490850|DBSCAN-SWA
AATGGAGCCCATCATTGAGATCGAAAACTTCAGCGCTTACTACGGCGAGAAGATAGCCGTCAAGAACGTGACGATGAAGATCTTCAAAAACCAGATAACCGCCATAATAGGTCCCTCCGGATGCGGTAAAACAACTCTCCTGAGGAGCATCAACAGGATGAACGATCATCTGCCTGGATTCAGGGTTGAAGGGAAGATATACTTCAAGGGACAGGACATCTACGATCCACAGCTCGACGTGACGGAGTACAGAAAGAGAGTCGGTATGGTCTTCCAGAAACCGACACCTTTTCCCATGTCGATCTACGACAACGTCGCGTTCGGCCCCAGGATACACGGGGTGAAGAGCAAACACATTCTCGACCGGATAGTAGAGGAATCATTGAAAAAGGCAGCCCTATGGGACGAGGTGAAGTCAGAACTGAACAAATCTGGTACGAGACTCTCCGGCGGTCAGCAGCAGAGGCTCTGCATAGCGAGAGCACTCGCCGTTGAACCCGAGGTGATTCTTCTCGATGAGCCGACATCGGCCCTCGATCCCATAGCGACTCAGAGGATAGAAAAGCTTCTGGAAGAACTCTCTGAGAATTACACCATCGTGATCGTCACACACAACATCGGCCAGGCGATAAGAATAGCGGACTACATAGCGTTCATGTACAGAGGAGAACTCATCGAATACGGACCAACGAGGGAGATCGTGGAGAGACCGAAGAACAGGCTCACCGAGGAGTACCTGACAGGAAAAATCGGATGATGGAGGCGGAAAGTATGGTCGATCACGTTCACTTCGAAAGGGAACTCACACTTCTCAAGTCTGATGTCTCGAAGATGCTCTTTCTGGTCTCTGAATCTTTGAACGACGCGATAGAGAGCCTCGAGACGATGAATGAGACGCTCGCCAGGAAGGTCCTCGAGTCGGACGATATGATAGACGAACTGAACAGGGAGATAGAAGAAAAAGCTTACCAGATCATAGCGAGGTACAACCCCATCCTGAAACAGCTCAGGTACATCATCACCATCTTGAAATTTTCAAACGATCTGGAGAGGATAGGAGATCTCTCCTGCAACATAGCTGAGAAGTGTCTCTTTCTCTCTGAAGAGAAGATCAAATTCGAAATGCTCAAGGAACTCAAAGACATGTTCGGAAGCACCCTGAAGGTGGTTCAGGACGCTTTCAAGGCCTTCGTTGAAGAAGATGTGGATCTGGCTTTCAGGCTCTGGAAGTTCGACGATGTGATAGACGAGATGGAAAAGAAGATCAGAAGAATCGTGGTGGAAAGAATAAGGGAGGGAAACATCTCGGCCGAGCTGGCGCTGGTTTACATACTCATCGCAAGAGACCTTGAGAGGGTGGGAGATCACGCCAACAACCTCTGTGAGGAGGTCATATACATAGAAACGGGAAAAAACATGAAGGAATTCCTGAGGGGTGTTGAGAGTGGGAGTGAAGGTGCTGATAGCTGAAGACGACGAAGACATAAGGAGCGTGTTGAAGAGATACCTGGAAACCGAAGGATACGAGTGCGACGAAGCAGAGTCCCTTTTCGATCTCAAGAAAAAACTCTCTGAAGGAACGTACAACGTGCTTCTCCTCGATCTCATGTTTCCCGACGGTGTGGCGATGGACGAAATTCCCGAGATGAAAGTTTCTCACCCGGAAATGGCCATCATCATCATCTCGGCAAGGGACAGGGACATGGACCGCATCTTTGGAATAGAGCTCGGAGCGGATGATTACGTGACAAAACCTTTCAATCCAAGGGAAGTTCTCGCACGTGTGAAAGCGGTTCTGAGAAGGATGGGGAAAGAACAGAAGGTACTGAGATTTGGAAGACTCGAGATCTTTCCAGAGGATTACATAGTCAGATACGATGGAAAAAACGTTGAGATGACAGCCAAAGAGTTCGAGCTTTTGAAACTCCTCGCCACGACCCCGAACAAGGTCTTTTCAAGAGAGGAGATCCTGAACAGGGTGTGGGGAGACGATTACGTCTCTGACAGGGTAGTGGATGTCCACATCAGCGCCATTCGATCGAAGATAGGAAAGGGATGGATAAAAACGGTGAGGGGATTGGGATACAAGTTTTCAACACGGGGTGATGAGGGTGATAGAGCTTGAAGATCTCGATCATATCAGAGAAGCGATCGTGATACTGAAGGGCCTGGAAGTGGAAGGTGCGAACAAACCGGGTGAGAAACTCGGCTTCAAAAAGGGAAAGAATCTGATGTCGATCTTCACGTGCAAGGAAATGGATAGATTCATCAGAGATGTTCAAGAAAGAAAGAATTTCTCCCTTGAAACAAACGCCTATTTTTTTGAACTCCACTCGAAAAGGTTCGTCTCCCTCCGCTACCTTCCGAAGAAGAGTCTTCTCTTTGTGAACGATCTCACCGAGGAGAGAACTCTCAGCGAGGCAAAACTCGATTTTGTAACGGCCGTCTCCCACGAGCTGTTCACACCTCTTTCTGCGTCAAAGGCAAACGTTTTTCTTCTGAAGGACATAGAAAACGATCCAGAAAAACTCGAAATACTCGGAAAAGTTGAGCGCTCCTTGGACAGAATGGAAACGATCATCAGACAGCTCAAGGTGCTCACCATGATACAGCTGAGACTTTACGAACTCAAGATGGAGCACATTCCTGTCGAAGAAGTCGTTCACATGGTCTTGGAAGAGCTTCGAGAAAAGATCGAGTCAAAGAAGATCAAGGTAAACGTTTTTGTGGATGTTGAAACAATCGAAACTGACAGGTTCGTGTTCCACACGATCTTGAAGAACCTCGTTTCAAACGCCGTGAAGTACTCTTATCCCGATTCTGTGGTGGAGATTTCTATCACCGGTGAAAGACTGAGTGTGAAAGATCAGGGAATCGGTATCAAAGAAGAGGAGAAGAGCAGGATATTCGAGCGCTTCTACAGAGGTTCAGAAGCACTCAAGATGGCGCCCGGTTCTGGCCTGGGACTTTCCATAGTGAAACACCTGTGCGACACGATAGGTTACAGGCTGGAAGTGAACTCTCAGTGGCTCGTTGGATCAGAGTTCATCGTTCACTTCAAATGATGAACTCCTCTTCTTCCCACGTTTTCCCCTCCGGGTTGTGCCACCCGCCTTCTCTCGTGCACCAGGCCGGAAGCGGAAACTTCACCGTGAGAGGAAGGTTCAAGAACGGCTGATCTATGATCACTTCTCCCTGTCTCAAGAGTGCTGCTTTTCTCTTGTAGTGCTCTGTGAGATGCGAGTATTCGGGTTTTATGAGTTCGGCTCCTTTCTGCCTGCCCACAACCACCGTAGCGGCTTGCGTGATTACCCTGTAATCCACTTCGGAAGCGGTCTGTTCGGCTCCAATGAGGATCACTCTGAAAGATCTTCCTCTTTCCGCCACATCTCTGAAGATGTTCGCAAGGGCTCCTCCGCCGTGTCTTGGTGCGTACTTGTTCAGCTCGTCCAGGAAAATGAAAACGGGCTGGGTGAAACCGCTGTTTCTTTCTTTTTCTCTCATTACCTCGGAAAGAATCGCACCTACAACGAACGCCTGTGCGCGTTCTCTCAACTTCGAAATGTCGATGACTGTGACCCTTCCCGGCACGTTCCAGTCGATCCGATAGTTGGTCTGCCACGGTTCCACTTTCAGAGGCGGTTTCACCCAGAGTCTGTCGAAGTCCATCTTTTGAGCGGCTTTCAATCTCCTGATCAGCATCCCGATCGTCTGCTTCTGGACGTGTTCTCCCAGGAGATACTCTCTTGTCCTTCCACCTTCTCCAAGATCTTTTATCAAACTATCGAGATCAAGTGGAAGATCCACGACTTCACCTTTCTTCATCACCACTTCGCGCAGTGCTTCTGACGGCAGTTTTTTTCTGTCAACGATGTATCCCTCTTTCAGAAATTCCTGGTACATCTCTTCCATTCTCTGGGAAAGGTGCTCCTGGAGGGACCAGACCGCGAGCTGAAAGTTCTGGTTTCTCGTCATCTCATCTGGATCGAACATGAGTTCCAGAAGGTTCATTTCGACGATGTCGAACACGTCCCAGCCGTAAACGTTCACACCGATCAATCTCTTGTTGACATCCGGTATGTAAGCTCCCTTCTCCCTGCTGGGAGCGTAGAATGCGACATTTTCAAAAGGTTTTGGTTCAATGCCGAGAACCCTGTACATTTCATCCCATTTCTCCCTTTCTGAATACCACTCCTTCGAAATGCGATCGAGAAACAGCAGACTCTCTCCCTTCACGTTGAAGATGATGTATCTCGCCTCTCTCAGCTCTCTCATCAAATCTCCATCGTTTTTGCTGGACGTTTCTATCATCGACTTGACGAGGAACGTGGTGTAAGACGTTTTCGCCGCAACACCGGACTGTCCGGAGACGTTTATGTGGGCTCCGTTGTCTCCCAGGATGTATCTCAAATCGAGATAAGCCGGCCTTCCGTTCTTCAGCAAGCCAACTGGCAGTGCAACGTTCTTTCTCTTCAACTCATCGAATCCAAGGGCGATGTCTATCTCCTCATCTCCGACGAGAAAGACGGGGGAGCCTATGTTTGGAGGGATCTCCGGAGCGTCTTCGAGGAGCTTGTCTCCTTCTTTCAGAAACGATCTTGTCACCTTCACCTTCGCGATGTATATCGGATAGGCAGGTTTCAACTTCTCGAGTGCAACTTCCTCTTCGTAGCCGTTTCTCAAATCTCCATCCCATCTGTTCTGTATATCAACGATCATTCCGTACGTGACGACGGTGCCGTACCCCGTGAGGTACTCAACCTTCACAACATCCTCTATCTGAGCGAATACCTTGTACGCTTCTCCTGGCTTTTCGGCGGTCATTCGAACGAAGAATTCGTACGGACTGGACTGGAATATACCGGTGACAACCCCTATCTTTCTTCCGCTCATTTACCTATCCCTCCTCGATGAGCTGTTTTCTGTACATTCTACTGTACATGCCATCCCTGATCATCAATTCCTCGTGAGTGCCCTCTTCTATCACTCTTCCCTCGTGCAAGACATATATCCTGTCGGCGTTTTTCAACACCTTCAATCGATGTGTTATGACGACGATCGTTTTTCCTTTCATTCCTTTTCTGATCGAATCTATGATCCTCTCTTCGGTTTCAGGGTCAACGGCCGAGAGACAGTCGTCGAATATGTAAACTTCGAAATCTCTTATGAGAGCGCGGGCTATGGTGATTCTCTGTTTCTGACCGCCCGAAAGCGTCACACCTCTTTCCCCAACGATCGTGTCGAATTTTTCTGGAAAGCTCATGATATCGTCGTAGACGGCCGCAAGTTTTGTCACTTCTTCGATCTTTTTCTCATCGACGTTTTCCAAACCGACCGTTATGTTGTTTCTCACCGTGTCTGAGAACAGAAACGTTTCCTGCGGAACCAGAGTGACGATGGATCTGATATTCTCCGAAGAAACGTCGTTTATGTCCACACCGTTTATGAATATCTTTCCCCTTTCCACCGGATAGAGCTTCACGAGAAGCTTTGCTATCGTGGACTTTCCACTTCCAACACTGCCGGCGATGCCTATCATTTCTCCCCTGTTTATCTTCATGGTGACGTTTTTCAGAACTTCACGTTCTGTTCCGGGGTATCTGTAGGTCAGGTTTCTCACTTCAAAACTTTCAAAGTGATCTATCCTGATCGGCTTCTCGGGTTCTTTAACTTCGGGTTGAGCGGTGAAGATCGTGTCCAGACGTCTCATAGCCGCTCTTCCCCTCTGGAACAGATCCACCATGAAACCGTAGGCCATCATCGGCCAGACGAGCATTCCAAGGTAAGAATTGAAGGCTATGAAATCACCGAGAGAGATCTTCCCGTTTATAACGGCTCTTCCACCGTAGAGAAGGGCGAGGAAAAAAGCGGTCGAAGCGATAAGATTGATGAGGGGCCTGAAAACGCTGGAGACTTTGATTGCACTGAGAGTGTCTTCGTAGTTTTTGAGTGCCCTGTTTTCAAATATCTTGAATGAGACGTCTTCCACCGAGAAGCTCTTCACAATGCGCACACTCGAAATCGTTTCTTCGGTGAACCCGGAAAGTTCCGAGAAGGATCTCTGAACTTCCGATACTTTTCTGTGTATGAGTCGTCCAAAGCTCATCGAAACAGGGGCAAGAAGCAAAAGCGGCGCAAAGCTGATCCAGGAGAGCTTCCAACCCACGTTACCTATCATGAAGAAAAAGACCATCACGATCATGATGAAAGAATCGAAGAAGAGTATCGCACCCTGGCCGAGCACTCTTCTCAGAAGGCTCAGATCGTTGGTGAACCTTGCCATGAGTTCACCGCTTTTCATTCGATCGAAGAAACCGGGAGTGAGACTGAGCAGCTTTGAGAACATCTTGTTCGATGTCTCGAGGAAAAACTTTCTTGCAGTGCCACCAAAGAAGAATCTCCAGAAGAACCTTCCAATAAACATCCCGCTCGCGGCGGCCATCACCCAAAACAACATTATTTTGAGTGTATCGAAGTTCATCGTTTCTGTGTTCAGCATGTCAACGATCTTTCCGATGACACGTGGAATGTAGACTTGAAGGAGGTCCACCGCGATGAGTGAAAGAACACCGAGAAGGTATTTGTGCCAGTTTCTCTTCAGGAAATCAACGAGAATTGAGGAAGTCTTCAATTCTATCCAGCGCCTCCGTAAGTCTTTCTATAGATGTGGCAAAAGAAAGCCTCACAAATCCAGGCTTCAGAAAAGCGGATCCTGGAACGAGTGCAACCTTCTTTTCTTCGAGGAGCCTTTCACAGAATTTCACATCGTCACCCCGGACTTTGAAAAAGAGGTAGAACGCACCTTCTGGTTCCACGAACTTAACACCCATCTTTTTCAATCTTTCCACCACGAAATTTTTTCTTTCTTTAAAGGTCTGAACCATGTAAGAGTTGTCCACTTCCAGAGCCTTCAAGGCGGCGTACTGTGCTACCGTGTTGATACAGGAGGTGGTGTGAGACTGGATCTTCGACACAGCGGTCGCTACTTTTTCGCTCGATATCAGGTAACCCACCCTCCAGCCGGTCATGGAGTGAGACTTCGAGAAGCCGTTTATGTAAACTATCCGGTCGAATCCTTCAGAAACATCGAGTATCGATGTGAATTCATCCGTGTAAACAAGGGAATCGTAGACTTCGTCGCTGATTATGTAGAAATTCCTCTTCTTGGCAAGTCTCACAAGTCCTTCAAGGAACTCTCTTCTGTACACCACACCAGTGGGATTGTTCGGCGAGTTGATAAGAACGGCTTTCGTTTTCCCAACAAGAAGCCCTTCCACCTCTTCCAGACTGGGCTGGAAATTTTTACTCATGAACGTCTCAACCACGTTCACCGTGCCACCAGCAAGGATGATCTGAGGAATGTAGCTGACCCAGACGGGAGAAAACACGATCACTTCGTCACCGGGATCGAGAAGGGCCATGAAAGCATTGAACAGAGCCTGTTTCGCTCCATTCGTCACCACGACCTGATCCGGTGAGATATCTTTTTTGTATCTCTCGCCTATCCTTTTCGCTATACCCTCTCTGAGTTCGTAGATACCACGAGGATCTGTGTATTTCACTTCTCCTTTCTGGAGAAATCTCATCGCTTCTTCCACGACGGGTTCCGGTGTGGGAAAATCCGGCTCACCAGCCGTTAGATTGATCACGTCTTCTCCCTTTTTTATGAGGGCTTTGGCCTTCGCGTCGAGTTCCATGGTTTTCGATATGGGAATCTCTGATATTCTCCTGGATACCATTTAGAAACCCCCTGGTCGTGGTTTCATATTTAATACTACCACAAAGATCCGATTTAGACAGGTTAAACTTCTCATGTTATTCTTTTAAAAGAAAGGAGGAGTAAGGAATGGAAGCGGTGATTTTCGACATGGATGGAGTGCTCATGGACACAGAGCCTCTCTACTTCGAAGCTTACAGAAGAGTCGCGGAAAGCTATGGAAAACCTTACACGGAGGATCTCCACAGGAGAATAATGGGAGTTCCTGAAAGAGAAGGTCTTCCCATCCTCATGGAAGCTCTGGAGATAAAAGATTCTCTGGAGAACTTCAAAAAGAGGGTCCACGAAGAAAAAAAGCGCGTTTTCTCTGAGCTTCTCAAGGAAAATCCGGGTGTAAGAGAGGCGCTCGAGTTCGTAAAGAGCAAAAGAATAAAACTCGCGCTCGCAACCTCCACACCACAGCGAGAAGCGCTGGAGAGATTGAGAAGACTCGATCTCGAAAAGTACTTCGACGTCATGGTGTTCGGTGATCAGGTGAAGAACGGAAAGCCTGATCCAGAGATATACCTTCTCGTTCTGGAAAGGTTGAATGTGGTCCCAGAGAAGGTTGTGGTCTTCGAAGACTCAAAGAGCGGTGTTGAAGCCGCAAAAAGCGCCGGCATAGAAAGAATCTATGGAGTCGTTCACTCTTTGAACGACGGTAAAGCGCTTCTTGAAGCGGGTGCGGTTGCTCTGGTGAAACCCGAGGAAATCCTGAACGTTCTCAAAGAGGTTCTTTAAATCTGTTCGTGATCGGCATTCTCCAGTCTTTCCCAAAAGCTCTCGTGGAGATCTTCACGCCGATAGCGGCCTGTTTTCTCTTGTATTCGTTCTTTCGTATCATTTCCGTCACGTCGAGCACGGTCTTCCTGTCGAAGCCTTTTGATGCGATTTCTTCTGGATCGAGCCCTTCTTCTATGTAGAGTCTCAGTATTTCATCGAGCACCTCGTACGGTGGTAGTTTCTCCTGGTCCGTCTGGCCCGGCCTGAGCTCCGCCGTTGGGGGTTTCACGAAGATGTTTTCCGGAATGATCTCTTTTCCTCTCCAGCTGTTGTACCATCTTCCTATTCTGTAAACGTCTGTCTTGTAAACATCCTTTATAACGGCGAATCCTCCCGCCATGTCTCCGTAGAGAGTCGCGTATCCCGTTGCCATCTCGCTTTTGTTTCCCGTTGTGAGAACGAGCCATCCGAACTTGTTGGAAAGTGCCATGAGGTAGTTTCCTCTGATCCTCGCCTGAAGATTCTCTTCGGTTATATCTGGTTCTCGCCCAGCGAAAACGCCTTTGAGTGTTTCGAGGTAGGAGTGAAACACATCCGTGATGGGAATGATGAAAGTCTCTATGCCCAGATTTTTTGCCAGTGTTTGCGCGTCTTCGATACTTTCTTTTGAGGTGTACATGGACGGCATGAGGACACCTTTCACGTTCTCTTTTCCCAGGGCTTCTGTTGCTATGACCGCGACGAGGGAAGAGTCCATTCCCCCACTGAGCCCTATCACGACCTTTTCAAAACCGTTTTTCCTCACGTAGTCTCTCAGACCCGTGATCAGAGCCCTGAACATCTCTTCTTCTCTCACAGGAAGAGGATTCACCACCGGTTCAAAATGCCCGGATTTCTCCCGGAGATTTCCCGCTTCCACGGTTTTCACCGGATAGTTCTGAGTCTTCATGTACCTTCTTCTAGGATCTACCAGTGAGACTCTGAGGTTCTCGTCCAGATCCAGATCCACCGTGATGATCTCCTCTTCGAAGAGCTTTCCGTAGTTTATGACCTCTCCTGAAGCGTCAACCACCATGCTTCCTCCATCGAAGACGAGTTCGTCCTGACCCCCGACCATGTTGCAGTAGGCCATGGCCACGTGATAGTCGTAAGCCTTCATGGAAAGATAGTCCTTTCTCAGAACAGGTTTCCCCACGTGGTAGGGAGAAGCCGAAAGATTCGCTATGAGATGAACTCCCTCACCCAAGGAAAGCGAGGCGCTCGGTTCCACTGGATTCCAAATGTCTTCGCAGATGGTAACTCCCACTTTGATGTTGCCTATTTTCACGACGAGGAGTTCCTCTCCGGGTTTGAAGTATCTTCTCTCATCGAAAACCCCGTAGTTCGGCAGAGATATCTTCCTGTACACTCCAAGGATCTCACCGTCTTTCACAACTGCGGCGGCGTTGTACGCATCCTCGTCGCTGTCTATGAAGCCCATCAAGACGGTAACACCGAGATTTCTTGTATGCTGAGCGAACTTCTGGAGGTATTTTCTGTTCTCTCTGAGGAATGAGAGCCTGAGCATGAGGTCTTCGGGAGGATAACCGGGAAGAAAGAGCTCCGGGAAGACAAGGAGATCACTTCCCCGGTCTTCCGCCACTCTGAGGGCTTCTATTGCCTTCTTCAGATTTCCCTCGAAGTCTCCAAGGGTCGGATTAAGCTGAGCCAGTGTCACTCTCAGTCTTTTCATAGGATCCCTCCATTATCCGGTACATCGAGTAGACCAGAACGACTCTCAAGAGATTCGATATTATGGAACCCAGGTACGGTATGAACCAGACGATGAACACAACGGCTGCAGCGAGGAAAACGTCCACCGTCTTTTCCCCTTTGAACACCATTCTGTAGTTCTTTTCCAGGACGCTGGAAGGAGATTCGTCTTTAGCGGAGAGCAGGGGAACAAAGAAGAGAAACATGAAGGCCACAAAACCGGGAAGGACAAACAAAGAAAAACCAGCACTTATAGTCAACCCGTAAAACGCTGAAAACACGAGAAGACTGAGAAGATTTTCTCTTCTTCTTGGAACCAGAAGTAGTCCCATCAACAATGCGAGCAGTACCTCTTCAAAGAGTTTTATGACGAAGAAATCGAAGCTCAGAAAATCGTACTTTCCGGCAAAGATGTAAAGCACTTCCGTCACAAACCCCAGAACGAGAGCCATAACGCTTATCACAGCGAGTTTTGTATTTTGAACTATCTCCCTGAATCCTTTAACGAAACTCTCGATCACACTTATCCCCCCTCACCTCCGTACTCGATTCTCCAGTCTGAGGATACCTTCCCAACGACTGTTCCATCCACTCTGGCCAGAACCTCGTCCACCTTTTGTTTTTCCACGATCAGAAACATTCCAACACCCATGTTGAAGGTGTTGACCGCTTCGTTGAAGTCTACATATTTCAATATCCAATCAACGAAGTCCCTCTTTGGTAGAGAAACGTGCGCCCCAAGCTTTCCGAGGACTCTCTTCAGCGCCCTCACCACTCCCCCGCCGGTCACGTGTGCGATCCCTTTCACCAGGTCGAACAACTCGATGACTTCTCTGTATATGCGTGTTCCTTTCAGGAGTTCAAAGGGAAGTTCCTCGATCTTTATGGATTCCTCCTTTATGATCCTTCTTATGAGTGACCAGCCGTTCGAGTGGAACCCCGATGACGGAATACCAACGATCACATCCCCTTCTTTTATCTTATCAACCGGTATCCGTTTTTCTAAAACGCCGACAGCGAACCCCACAGCGTCCCAGTCTCCACGATACACATCGGGCATCTCAGCGGTCTCACCGCCCACCAGTTTCACATCCACGCTGTCAAGGACGTTTACGAGCTCTTTTATGAACGACTCGTGTTCTTCGGAGATTCTCTCGACCCCAAGGTAGTCCAGAAAGGCCACAGGCCTCGCTCCCACGCAGACCAGATCGTTGTAGTTCATACCCACAAGGTCCTCAGCCGCGTAGCGCCAGGTCCCATGCTTTCTGTGAAGGATGAGTTTGGTGCCGATCCCATCGGCCGTTACAACAACGGGAGGAGTTGTGATCGTGAGTATGGAAGCGTATCCCGTGGGCTCTTTCATCACCCATTCAGGAAGTTTTACAGCGCTTTTTATAGTTTTTGCGAAGCTTTCTCCCCTCTCGACATCGACTCCTGCTTCTCTGTAAGTGTATTTCATAAAGCGATATCCCTCCTGTAGGTCTTACCTTCGAAGTGGACCTTTTCCGCGAGTTCGTAAGCCTTTCTTCGTGCCTCTTCCTTCGTTTCTCCTGTTCCCATACAGTGAAGAACACGGCCGCCATTGGTCACAAGTTTTCCATCTTTCTCCGCGACTCCCGCGAAGAATATGAGACCTTCTTCGGGAAGGGTGATCTCTTTGCCCTTTTCGGGAGCGTCGGGATAGCCCCTCGCTGCGAGAACCACGTCCACGGCGAATCCACGCGGTTCCACCGGCTCCATTTTACCACCGCGGTATCCCTCGAGAACCGCGTTGACAAATCCTTCGGGATTCAACGTCACTATCACTTCTGTTTCTGGATCGCCCAGTCTCACATTGTACTCGAGTATGTAGGGATCACCATCGTGGAGCATGAGACCCAAGTAGAGGAACCCCCGGTACGCGTAGCCTTCTTTCTCCACTCCCCACAGAGTCTTATCGAAGAGCTCTTCGATCTTTTTGATCGTATCGGAAGGGATTTCTACAGGCCCCCAGGAGCCCATACCTCCCGTGTTCGGTCCCCTGTCACCGTCCATCAGTCTCTTGTAATCTCTGACGAAGGGAAGGATCACGAAATTTCTTCCATTCACAACCGCCATGGCGGAAAGCTCGTTCCCGGCGAGAAATTCATCTATCACAACAGGGCCTTTCACACCTTTTATGAGCTCTCCGATGATGAGTTTCGATCCCTTTTCGATGGTTTCTTCCTTAGAGTCGAGGATCAGAACACCCTTTCCTCGAGCGAGCCCGTCCGCCTTTATCACGTAAGGAGGAGAGAATTTTTTTATCTTCTCTCTCAATTCCTCTGGAGTTTCTGCCACTTCGAAACGAGCGGTTCTTATACCGTACTTCTTCATGAACCTTTTGGCATAGACCTTGGATCCTTCGAGCCTTGCGACCTCTTTCACCGGGCCAAAGACGTTGGATCTCCAGTTCGAGACCCCTTCTACCAGGAATTCCTCGGATCCCGGTATCACGATGTCTTCTTCGGGAATGGCTTTCAAGGTTTTTTCCCCTTCATAGGGATGGTTCGTTCCATCTCTCTTCGTTCCGGCGTTTCCCGGATAGAAGTGGACTTCGTACCCCTGCTTTGCGAAAGCCCATCCTATCGCGTGTTCCCTTCCTCCAGAACCGAGTATGTGTACCCTCACCGCTTTCACCCCTCAGTGCCTGAAAACCCTGCTCGGAGCTTTGTAGAACGTGATTCCAAGTTCTCTGGCTTTTTCGATCACTTCTTCGTCTCTTATGGATCCGAGAGGAGCGACCACCGCTTTCACACCAGCCTGAGCGAGTATTTCGAGCGAGTCCGGGAACGGGAAGAACGCATCGGAAGCCGCAACCGCTCCCTTCGCTTTTTCTCCTGCCATCACGGTGGCGATCCAGGCAGCTCTCTTTCTCGAAGGCTGCCCGCTCCCTATTCCCACAGTTACACCGTCTTTTGCTATGAGAACAGCGTTGGATTTCGCTCCTTCCACAACACGGTAAGCGAATTCCAGATCCTCAAGCTCTTTTTCCGAGAGAGGCTCTCCAACTACCAGTTCAAAATTCCCTTCGGGGTACTTTCTTTCACTCAGGACGAGAGAACCGAATGCCATCTTTCCAGCCCACGAAGCGTAATCCCCAGGCTTCAAGAGACGCACTTTTTTCTTAGAGAGAACCTCGATCGCTTCCTGTGTGAAGGAAGGTGCCACGATCACCTCGAGGTACTTTTTCAATGACTTCGCAACTTCTTCGTCCATTTCGAAGTTCACGGCCAGGATCCCTCCAAAACTGGATTCGTCGTCCGCCTCGATGGCCTTCTTCACGATTTCCACTTTGTCTTCTCCTATCGCAGCACCACAGGGAGATTGGTGTTTCACCACAACCGCACCCATCCTCGGCAGGTTCTTCGCCATGAACCACGCGTTTTCCGCGTCTAAGATGTTGTTGAATGAGATTGTCTTTCCTTCGTGCAGAATCTCAAAAGCTGGTTTTCCATACACAAACGCTTTTTCGTGAGGGTTCTCTCCGTACCTCAGCTGAAGATCTTCCCTCTTGAAGGCGAGAGAAATACCCTCGACAAACTGGTTGGCCCTTATCGAATCGTACACACTGGTGAACGCAAAGGTCATTCCAGCGAGGTACTTTCTCGTCTCTTCGTCGTCTATCTCAATCGCGAGTTTGAGTGTTTCCATGTCGAAAGCGGGTTTCACCTTTTTCCAGTTTTTGGCAGCTGCTCGAAGAAGAGCGACTCCTCCTATGTCGATGTCTGGGGGTGGATATAGGTCCACAAAGACCACATCCCATCTGGGTTCCGGTCCGAGGATGCCGGCGAATATCTCCGGGTGGAGGGTCTTCACGAGCCCTCCGAGGAGATTCTCGAAACCCGTTATGGTGCTCACGTCGTTTGCTTCTATTCCGTTTGATTTCAAAAACTTGGCGGTGCCGGAGCTCGCCCAGATCTCCCAGCCTTTTTCGTGGAGTTCTCTCAGAATATCCAGATATTTTTCTTTCTCGTAGAGACTAACCAATATCCTCTTCAAGGATAACCCTCCTTCCTTCGATCTTCCATTTTCCTTCCAGTACCTTTTGAATGACGAGCGGATAATACCGATGTTCTATCTTATGGATCTCTTCTTCCAGTCTTTCGAGAGACCAGTCTTTCTTTATTTCAACTGCTTTCTGAAAGATGATGGGACCGGTGTCGACTCCCTCATCAACGAAGTGGATGGTGATTCCTGTGACCTTCACACCGTATTCGTAGGCCTTCTCGATGGCGTGGGTCCCGGGGAACGCGGGAAGAAGCGAAGGGTGGATGTTGACGATCTTCCACTTCCACCTTTCGACGATCTCCGCCGGAAGAATCCTCATGAAACCGGCGAGGACCACGAGGTCGGGATTCAACTCTTCGAGTCTTTTTTTCAGAGACTCTGCCCAGGGTTTCTCGAGCCTTTCCCAGGGGATCTGCAGTCTTTTCGCTCGCTCTATTGCGTAGCAGTTTCTGTCCACAAGGAGCATCTGGATTTCCGCACTCAATTCACCGCTTCGCGCTGCGTTCACGATCGCTTCGAAATTGCTTCCGTTTCCCGAAGCGAGAACGACTATTCGTGGAGGTACTCCCCGCTGAAGCACGCTACACACAGTTCACTCCTCCCAATGGCTCTTTTCAACCCTTCGAGTGAAAGGTAAAAGAGAGAGTCTGCGTTGACTATTTTTTTCACTTCTTCCACGGCACGTTCTCCCGCGACGAGCTCTTTCTTTCTGGCGGTATCTATTCCGTAGAAACAGGGAAAACGTACAGGTGGAGAGTGTATGCCAACGTGTACTTCCTTCGCACCCGCCTCTCTCAATATCTTCACGATGATGCCCATGGTTGTTCCTCTGACGATCGAATCATCGATTACAACAACCCTCTTTCCACTCACAACGTCTTCTATGGGGACGAGTTTTTTCTTGACGATCTTTTCCCTGTCCACCGGCATGATGAAACTTCTTCCCACATATCTGTTCCTCATGAGACCGATGTCGAGAGGTATACCCGAAGCCGAAGAAAATCCCATCGCTCCGGAAAGTCCGGAGTCCAGCACCGGAACGACCACGTCCGCTTCTATCGGGTTTTCTCTGTAGAGTTCTTCACCCATTCTGTAACGGGCTATGTGTACACTCTGATCGAGAAAGTGACTGTCCGGCCTCGCGAAATAGATGAATTCGAAGGAGCAGAACCGCTTTTCTTTTTTGGAGAACCTCACCGTTTCTGTGCCTTTGTTCGAGAAGAACACGACCGTTCCAGAGGGAACTTCTTCTATGTCTTCCACACCTATCGCTTTCAGCGCTGCGTCTTCCGATGCCACAACGATTCCATCACCGTATTTTCCATAGAACAGGGGACGGACGCCGTATGGGTCTCTCGCCGCAGCGAGGAATTCTTCGTGTAGAATGAGAAGTGAGTAGGCAAGAGGGACTTTCTTCAGCGCTTTCACTATGGACTCTTTCAGGTCACCTTCAGACATCGAGATGAGATGAAGGAAGACCTCCGAGTCGAGCGAGCTCTGGAAAACCGCTCCTTTTTCTTTGAGCATCTCTATCCACTTTTCGCCGTTGGGTATGTTTCCGTTGTGAGCGATCGCGAGCCTTCCCTTTCTCGTGAACGCCACGATTGGCTGAATGTCCTCGAGCGATCCTGCCGTGGAGTACCTTACGTGTCCAATACCCTTTTCAGCGTCTTCCCACCTGTCTTCGGTGAGAACGGTGTCTACGAGTCCTTTTCCTTTTATCGTTTTGAACCCGTCTACCACAACACCCACACTTTCCTGTCCTCTATGCTGAAGACCGAGAAGCACGTCGTGAAGGACAGAAAAGGCATCTTTCACATTCCAGACTCCTGCGATTCCGCACATATCATCACCTCGAGAGCGTTCCGATCTCCTTCACAGGAACATCGACTACGGGAGTTCTCTCAGAGAAGACGAGCACCATCTGATGCGCCGGCCTCACTTCTGGCAGTTTCACTTCGATCTTCAAGCCGTACTCTCTGAAAGTCTCCACGTGAGTTCTCGTCAGAAGCTGTGACGAAGAGAGGATGAAAGCACCTTCTTCTGAGAGTTTTCTTATGGCTCTCCAGAGTTCTTTTTCCCTTTCGAGTTCGAAGTCGTTCCATCCCACCGCGAACACCTTCGAAGGCTTCGGTTTTGCCACTTTCTGCGGGTTCACCTTCCCCAACATTCCCACAACCAGGGTGGGTGGAATGGGTTTTCCCTGGTACGTGTTGTAGAGAGAAGCGTTTCCCGATGCAACGGGAACACCGGAGAATTCGCAAGCGTTCTTGAGAGCGGTCATCATGGCCGAAAGTCCCACCGGATCAACATCGGGATCCCCGTAGTTCACGCAGTTCGTTATAGCGAGGGGTTCCGCACCAACGCTGAGCGTCTTTCTCACACTCTCGAGCACGGCTATGAAGGTTCCCCAGTAGGTATCCTGAAGAGCCAGATCCGCCCTGCTGTGTGTGACGAGGGAGTACCCCCCGTCTCTCTTTATTCTCATCACGGCCGCGCCGAATCCGGGTGGAACCACGGTATCCGTTCCGACCATGTGATCGTACTGCTCGAAGACTTCCCTCGCGTTCACCTCTTCGAATTCCACCCTTTTGAACTCTGGGATCTTTCCGGGTATGTATTCGACTATGTCCTCTTCTGGGGCGTTTGCGAGGAGCTGGACGGGAACTTCCATGACGAGATCGTTTCTGTACATCACCCTGTAAACTGGTTCTTCTATCACTTCGGCAACGACATCGCCGAAAAGAAGGTGCTTCCTGGCTATTTCCAGAATGCGGCTCGCCTTCTGAGGTGATGTGACGACCGCCATTCTTTCTTGGCTTTCGCTTATGAGGATTTCCCAGGGCTCCATATCCGGTTCTCTCAGGGGAACACGGTCCAGATGAACGATCGCTCCGAGATTCCCCTTCGCTACGAGTTCCGAAGTTGCGGACAGCACACCGCCCGCTCCCAGATCCTGAGCTCCTTCCACGAGTCCCTCTTCCACCATCTCCAGGAACGCTTCTATGAGCATCTTTTCAGCGAACGGGTCACCAACCTGAATTGAAAGCTTGGTTGCCTTATCACCCGTGAGATCCTCCGAAGCGAAAGACGCCCCGTGGATTCCGTCCCTTCCTGTGGCTCCTCCGAAGATCACTATGACCTGTCCCGGTCTCGATGCTTTCGAATCGACCAGCATGTCGTTTCTCACAACACCCGCTGCGAGCACGTTCACGAGGGGGTTGTGCGCGTATAGTGAGGAGATCCTGAGTTCTCCACCGACCGTTGGAACGCCTATGGAATTACCGTAATCGGCTATTCCCTCTATGATACCGTCTATGATTCGGGACATGTGGAGTGAATCGAATATGGCCGTTGGGCGGGCTCCCATCGCGAGGACGTCTCTGATGATTCCACCGACACCCGTTGCTGCACCGTTGTAAGGTTCTATCGCACTCGGGTGATTGTGGCTCTCTATCTTGAAAGCAACGGAATAGTAATCATCCAGGTTCACCACACCCGCGTTTCCCTCAAAACCCGTTTTCGGTAATCTTCTTATGTATTTCTTCGTGTGGGAGTATCCACAGTGTTCGCTCCACATGACTGAAAAAGCCTGAAGCTCGACGAAGGTGGGTTCTCTTCCAAGCTTCTCCTTGAGAATGTTCAGATATCTCAA

Protein sequences of DBSCAN-SWA_5

>NZ_CP003409|1472936:1490850|1475992_1477828_-|WP_011943943.1|DBSCAN-SWA
MSGRKIGVVTGIFQSSPYEFFVRMTAEKPGEAYKVFAQIEDVVKVEYLTGYGTVVTYGMIVDIQNRWDGDLRNGYEEEVALEKLKPAYPIYIAKVKVTRSFLKEGDKLLEDAPEIPPNIGSPVFLVGDEEIDIALGFDELKRKNVALPVGLLKNGRPAYLDLRYILGDNGAHINVSGQSGVAAKTSYTTFLVKSMIETSSKNDGDLMRELREARYIIFNVKGESLLFLDRISKEWYSEREKWDEMYRVLGIEPKPFENVAFYAPSREKGAYIPDVNKRLIGVNVYGWDVFDIVEMNLLELMFDPDEMTRNQNFQLAVWSLQEHLSQRMEEMYQEFLKEGYIVDRKKLPSEALREVVMKKGEVVDLPLDLDSLIKDLGEGGRTREYLLGEHVQKQTIGMLIRRLKAAQKMDFDRLWVKPPLKVEPWQTNYRIDWNVPGRVTVIDISKLRERAQAFVVGAILSEVMREKERNSGFTQPVFIFLDELNKYAPRHGGGALANIFRDVAERGRSFRVILIGAEQTASEVDYRVITQAATVVVGRQKGAELIKPEYSHLTEHYKRKAALLRQGEVIIDQPFLNLPLTVKFPLPAWCTREGGWHNPEGKTWEEEEFII
>NZ_CP003409|1472936:1490850|1489044_1490850_-|WP_038034355.1|DBSCAN-SWA
MRYLNILKEKLGREPTFVELQAFSVMWSEHCGYSHTKKYIRRLPKTGFEGNAGVVNLDDYYSVAFKIESHNHPSAIEPYNGAATGVGGIIRDVLAMGARPTAIFDSLHMSRIIDGIIEGIADYGNSIGVPTVGGELRISSLYAHNPLVNVLAAGVVRNDMLVDSKASRPGQVIVIFGGATGRDGIHGASFASEDLTGDKATKLSIQVGDPFAEKMLIEAFLEMVEEGLVEGAQDLGAGGVLSATSELVAKGNLGAIVHLDRVPLREPDMEPWEILISESQERMAVVTSPQKASRILEIARKHLLFGDVVAEVIEEPVYRVMYRNDLVMEVPVQLLANAPEEDIVEYIPGKIPEFKRVEFEEVNAREVFEQYDHMVGTDTVVPPGFGAAVMRIKRDGGYSLVTHSRADLALQDTYWGTFIAVLESVRKTLSVGAEPLAITNCVNYGDPDVDPVGLSAMMTALKNACEFSGVPVASGNASLYNTYQGKPIPPTLVVGMLGKVNPQKVAKPKPSKVFAVGWNDFELEREKELWRAIRKLSEEGAFILSSSQLLTRTHVETFREYGLKIEVKLPEVRPAHQMVLVFSERTPVVDVPVKEIGTLSR
>NZ_CP003409|1472936:1490850|1485827_1487186_-|WP_004080014.1|DBSCAN-SWA
MKRILVSLYEKEKYLDILRELHEKGWEIWASSGTAKFLKSNGIEANDVSTITGFENLLGGLVKTLHPEIFAGILGPEPRWDVVFVDLYPPPDIDIGGVALLRAAAKNWKKVKPAFDMETLKLAIEIDDEETRKYLAGMTFAFTSVYDSIRANQFVEGISLAFKREDLQLRYGENPHEKAFVYGKPAFEILHEGKTISFNNILDAENAWFMAKNLPRMGAVVVKHQSPCGAAIGEDKVEIVKKAIEADDESSFGGILAVNFEMDEEVAKSLKKYLEVIVAPSFTQEAIEVLSKKKVRLLKPGDYASWAGKMAFGSLVLSERKYPEGNFELVVGEPLSEKELEDLEFAYRVVEGAKSNAVLIAKDGVTVGIGSGQPSRKRAAWIATVMAGEKAKGAVAASDAFFPFPDSLEILAQAGVKAVVAPLGSIRDEEVIEKARELGITFYKAPSRVFRH
>NZ_CP003409|1472936:1490850|1474379_1475060_+|WP_004080003.1|DBSCAN-SWA
MGVKVLIAEDDEDIRSVLKRYLETEGYECDEAESLFDLKKKLSEGTYNVLLLDLMFPDGVAMDEIPEMKVSHPEMAIIIISARDRDMDRIFGIELGADDYVTKPFNPREVLARVKAVLRRMGKEQKVLRFGRLEIFPEDYIVRYDGKNVEMTAKEFELLKLLATTPNKVFSREEILNRVWGDDYVSDRVVDVHISAIRSKIGKGWIKTVRGLGYKFSTRGDEGDRA
>NZ_CP003409|1472936:1490850|1477832_1479566_-|WP_012311194.1|DBSCAN-SWA
MKTSSILVDFLKRNWHKYLLGVLSLIAVDLLQVYIPRVIGKIVDMLNTETMNFDTLKIMLFWVMAAASGMFIGRFFWRFFFGGTARKFFLETSNKMFSKLLSLTPGFFDRMKSGELMARFTNDLSLLRRVLGQGAILFFDSFIMIVMVFFFMIGNVGWKLSWISFAPLLLLAPVSMSFGRLIHRKVSEVQRSFSELSGFTEETISSVRIVKSFSVEDVSFKIFENRALKNYEDTLSAIKVSSVFRPLINLIASTAFFLALLYGGRAVINGKISLGDFIAFNSYLGMLVWPMMAYGFMVDLFQRGRAAMRRLDTIFTAQPEVKEPEKPIRIDHFESFEVRNLTYRYPGTEREVLKNVTMKINRGEMIGIAGSVGSGKSTIAKLLVKLYPVERGKIFINGVDINDVSSENIRSIVTLVPQETFLFSDTVRNNITVGLENVDEKKIEEVTKLAAVYDDIMSFPEKFDTIVGERGVTLSGGQKQRITIARALIRDFEVYIFDDCLSAVDPETEERIIDSIRKGMKGKTIVVITHRLKVLKNADRIYVLHEGRVIEEGTHEELMIRDGMYSRMYRKQLIEEG
>NZ_CP003409|1472936:1490850|1483689_1484625_-|WP_004080012.1|DBSCAN-SWA
MKYTYREAGVDVERGESFAKTIKSAVKLPEWVMKEPTGYASILTITTPPVVVTADGIGTKLILHRKHGTWRYAAEDLVGMNYNDLVCVGARPVAFLDYLGVERISEEHESFIKELVNVLDSVDVKLVGGETAEMPDVYRGDWDAVGFAVGVLEKRIPVDKIKEGDVIVGIPSSGFHSNGWSLIRRIIKEESIKIEELPFELLKGTRIYREVIELFDLVKGIAHVTGGGVVRALKRVLGKLGAHVSLPKRDFVDWILKYVDFNEAVNTFNMGVGMFLIVEKQKVDEVLARVDGTVVGKVSSDWRIEYGGEGG
>NZ_CP003409|1472936:1490850|1481415_1483146_-|WP_004080010.1|DBSCAN-SWA
MKRLRVTLAQLNPTLGDFEGNLKKAIEALRVAEDRGSDLLVFPELFLPGYPPEDLMLRLSFLRENRKYLQKFAQHTRNLGVTVLMGFIDSDEDAYNAAAVVKDGEILGVYRKISLPNYGVFDERRYFKPGEELLVVKIGNIKVGVTICEDIWNPVEPSASLSLGEGVHLIANLSASPYHVGKPVLRKDYLSMKAYDYHVAMAYCNMVGGQDELVFDGGSMVVDASGEVINYGKLFEEEIITVDLDLDENLRVSLVDPRRRYMKTQNYPVKTVEAGNLREKSGHFEPVVNPLPVREEEMFRALITGLRDYVRKNGFEKVVIGLSGGMDSSLVAVIATEALGKENVKGVLMPSMYTSKESIEDAQTLAKNLGIETFIIPITDVFHSYLETLKGVFAGREPDITEENLQARIRGNYLMALSNKFGWLVLTTGNKSEMATGYATLYGDMAGGFAVIKDVYKTDVYRIGRWYNSWRGKEIIPENIFVKPPTAELRPGQTDQEKLPPYEVLDEILRLYIEEGLDPEEIASKGFDRKTVLDVTEMIRKNEYKRKQAAIGVKISTRAFGKDWRMPITNRFKEPL
>NZ_CP003409|1472936:1490850|1479540_1480674_-|WP_011943945.1|DBSCAN-SWA
MVSRRISEIPISKTMELDAKAKALIKKGEDVINLTAGEPDFPTPEPVVEEAMRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKERKNFVVERLKKMGVKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLNSR
>NZ_CP003409|1472936:1490850|1483111_1483687_-|WP_038034358.1|DBSCAN-SWA
MIESFVKGFREIVQNTKLAVISVMALVLGFVTEVLYIFAGKYDFLSFDFFVIKLFEEVLLALLMGLLLVPRRRENLLSLLVFSAFYGLTISAGFSLFVLPGFVAFMFLFFVPLLSAKDESPSSVLEKNYRMVFKGEKTVDVFLAAAVVFIVWFIPYLGSIISNLLRVVLVYSMYRIMEGSYEKTESDTGSA
>NZ_CP003409|1472936:1490850|1472936_1473692_+|WP_004079999.1|DBSCAN-SWA
MEPIIEIENFSAYYGEKIAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHLPGFRVEGKIYFKGQDIYDPQLDVTEYRKRVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHILDRIVEESLKKAALWDEVKSELNKSGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIVERPKNRLTEEYLTGKIG
>NZ_CP003409|1472936:1490850|1475040_1476000_+|WP_004080004.1|DBSCAN-SWA
MRVIELEDLDHIREAIVILKGLEVEGANKPGEKLGFKKGKNLMSIFTCKEMDRFIRDVQERKNFSLETNAYFFELHSKRFVSLRYLPKKSLLFVNDLTEERTLSEAKLDFVTAVSHELFTPLSASKANVFLLKDIENDPEKLEILGKVERSLDRMETIIRQLKVLTMIQLRLYELKMEHIPVEEVVHMVLEELREKIESKKIKVNVFVDVETIETDRFVFHTILKNLVSNAVKYSYPDSVVEISITGERLSVKDQGIGIKEEEKSRIFERFYRGSEALKMAPGSGLGLSIVKHLCDTIGYRLEVNSQWLVGSEFIVHFK
>NZ_CP003409|1472936:1490850|1480781_1481432_+|WP_004080009.1|DBSCAN-SWA
MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALEIKDSLENFKKRVHEEKKRVFSELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFGDQVKNGKPDPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAGAVALVKPEEILNVLKEVL
>NZ_CP003409|1472936:1490850|1487744_1489040_-|WP_004080018.1|DBSCAN-SWA
MCGIAGVWNVKDAFSVLHDVLLGLQHRGQESVGVVVDGFKTIKGKGLVDTVLTEDRWEDAEKGIGHVRYSTAGSLEDIQPIVAFTRKGRLAIAHNGNIPNGEKWIEMLKEKGAVFQSSLDSEVFLHLISMSEGDLKESIVKALKKVPLAYSLLILHEEFLAAARDPYGVRPLFYGKYGDGIVVASEDAALKAIGVEDIEEVPSGTVVFFSNKGTETVRFSKKEKRFCSFEFIYFARPDSHFLDQSVHIARYRMGEELYRENPIEADVVVPVLDSGLSGAMGFSSASGIPLDIGLMRNRYVGRSFIMPVDREKIVKKKLVPIEDVVSGKRVVVIDDSIVRGTTMGIIVKILREAGAKEVHVGIHSPPVRFPCFYGIDTARKKELVAGERAVEEVKKIVNADSLFYLSLEGLKRAIGRSELCVACFSGEYLHE
>NZ_CP003409|1472936:1490850|1487166_1487784_-|WP_012311197.1|DBSCAN-SWA
MCSVLQRGVPPRIVVLASGNGSNFEAIVNAARSGELSAEIQMLLVDRNCYAIERAKRLQIPWERLEKPWAESLKKRLEELNPDLVVLAGFMRILPAEIVERWKWKIVNIHPSLLPAFPGTHAIEKAYEYGVKVTGITIHFVDEGVDTGPIIFQKAVEIKKDWSLERLEEEIHKIEHRYYPLVIQKVLEGKWKIEGRRVILEEDIG
>NZ_CP003409|1472936:1490850|1484621_1485815_-|WP_004080013.1|DBSCAN-SWA
MRVHILGSGGREHAIGWAFAKQGYEVHFYPGNAGTKRDGTNHPYEGEKTLKAIPEEDIVIPGSEEFLVEGVSNWRSNVFGPVKEVARLEGSKVYAKRFMKKYGIRTARFEVAETPEELREKIKKFSPPYVIKADGLARGKGVLILDSKEETIEKGSKLIIGELIKGVKGPVVIDEFLAGNELSAMAVVNGRNFVILPFVRDYKRLMDGDRGPNTGGMGSWGPVEIPSDTIKKIEELFDKTLWGVEKEGYAYRGFLYLGLMLHDGDPYILEYNVRLGDPETEVIVTLNPEGFVNAVLEGYRGGKMEPVEPRGFAVDVVLAARGYPDAPEKGKEITLPEEGLIFFAGVAEKDGKLVTNGGRVLHCMGTGETKEEARRKAYELAEKVHFEGKTYRRDIAL
>NZ_CP003409|1472936:1490850|1473706_1474405_+|WP_004080001.1|DBSCAN-SWA
MVDHVHFERELTLLKSDVSKMLFLVSESLNDAIESLETMNETLARKVLESDDMIDELNREIEEKAYQIIARYNPILKQLRYIITILKFSNDLERIGDLSCNIAEKCLFLSEEKIKFEMLKELKDMFGSTLKVVQDAFKAFVEEDVDLAFRLWKFDDVIDEMEKKIRRIVVERIREGNISAELALVYILIARDLERVGDHANNLCEEVIYIETGKNMKEFLRGVESGSEGADS

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_004079999.1|1472936_1473692_+	phosphate ABC transporter ATP-binding protein	F2Y2R6	Organic_Lake_phycodnavirus	2.9e-18	31.3
WP_004080001.1|1473706_1474405_+	phosphate signaling complex protein PhoU	NA	NA	NA	NA
WP_004080003.1|1474379_1475060_+	response regulator transcription factor	W8CYM9	Bacillus_phage	2.8e-28	32.6
WP_004080004.1|1475040_1476000_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	2.6e-16	28.7
WP_011943943.1|1475992_1477828_-	ATP-binding protein	A0A139ZPI2	Marinitoga_camini_virus	1.6e-30	28.0
WP_012311194.1|1477832_1479566_-	ABC transporter ATP-binding protein	W8CYL7	Bacillus_phage	2.8e-40	26.7
WP_011943945.1|1479540_1480674_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_004080009.1|1480781_1481432_+	HAD family phosphatase	G3MA51	Bacillus_virus	1.8e-08	25.4
WP_004080010.1|1481415_1483146_-	NAD+ synthase	A0A2L0UZF5	Agrobacterium_phage	1.1e-92	36.6
WP_038034358.1|1483111_1483687_-	hypothetical protein	NA	NA	NA	NA
WP_004080012.1|1483689_1484625_-	phosphoribosylformylglycinamidine cyclo-ligase	A0A0E3HQK7	Synechococcus_phage	1.4e-38	35.5
WP_004080013.1|1484621_1485815_-	phosphoribosylamine--glycine ligase	NA	NA	NA	NA
WP_004080014.1|1485827_1487186_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	Q58MG4	Prochlorococcus_phage	1.2e-41	39.1
WP_012311197.1|1487166_1487784_-	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.9e-26	39.5
WP_004080018.1|1487744_1489040_-	amidophosphoribosyltransferase	A0A0M3SGR2	Mollivirus	9.6e-46	32.5
WP_038034355.1|1489044_1490850_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	1.9e-79	34.1

Sequences of DBSCAN-SWA_6

Nucleotide sequences of DBSCAN-SWA_6

>NZ_CP003409|1622603:1632271|DBSCAN-SWA
GTCAACCGTTCAGCCACCTCTCGACCACCTCTTTTCCGGTAAAGAAGAGAGCGTCCGCGTAAGAAAGGTCATCGAACCTGAATTCATCTCCCACTTCTAGTTCTGCTCCCTCGAACCAGACAAGGTAATTCTCAGGAACAACAATTCTCGATGGTTTCAACCTTTCAATTACCTTCTTCATCGTTGTTTTCCTCACACTGTCACCGAGAGATGGATCGAGGGGACCCGCGACCACGTACTTTCGTAGCTCAACGGGAACGTGATATCCTATTCTGATCACTTTTGTCCCCCAGCCCTCAAAAATGCAGACGAGATCAGAACAGATATCTACCGCTTCTTCGACATTCAAAGGTGTGTACTCTCCTTCTTCCATCATCCTGTGGAGTTCTGTCCCTTCGAAAACGAGTGTCGGGTGTATTCTCACCATATCCGCTCCACATTCTACGGTCCTCAGCGCGGACAGGATTTCCCCTCTTCGATCACTTCCCGGAAGTCCTACCATCAGATGAACACTGAGAACGAATCCGTTCTTTTTGATGAGTTTGCAGGCTCTCTCAGCTTCTTCGGAGGTGTAACCTCTCTTCGACCTCTCGAGCACCTCATCCAAGAAAGACTGTACTCCTATTTCGATCACGTTCACTCCGTATTTCTTCAAAATCTTCAGTTTTCTTTCGTTTATCTCGTCCGGGCGCGTCGAGACTCTGATCGACTTCACCACAGGGAATCTCTTCACGAATCTCAGGTACTCTTCCATCTTTTCCTCTGAGAGACCGGTGAACGTTCCTCCGTAGAATCCCAGTTCGTATTCATTCGACGTTCTGGAGTACTCTTCTATGATTCGTGCGATATCATCGAGAGACGGGACTTTTGTCTGTCCCGTGGCTTTTATCTGGTCACAGAAGACACACCTTCTCTTACAACCCGCGTACGGAAGAAAAACGGGAATTATCTTCATGCTCTCTCCTTCAAAAGCTTTTCGTAGGCGATTCTTGCAGCCTCCTTTTCCGCTTCTTTCTTTGTTCTACCCCTGCCCGTGGCGATGGTCTTCCCATCCACCCTCACTTCCACAACAAAAATCCTGTCACCATCGTTTTTTTCTGTTCTCACCAGTACATATTCTGGTGGCACCTTGTGTTCGCTCTGAACTATTTCCTGGAGAGCCGTTTTGTAGTCGAAGAGCATTTCACCCTTCATGATCTTTTCTATGTAGAACTCGAATTCCTGCTCAAATAGCTCCTTTATCTTCTCATAGCCCTGATCGAGGTATATGGCAGCCAGAAGCGCTTCGAACGCGTCGGCGAGTATGGAATCTCTATCACGTCCACCAGTTTTTTCCTCTCCCTTTCCAAGGAACAAGAATTTGCCAAGATTCATCTTCCTGGAAACCAGGGCGAGAACTTCTTCGCTCGCCGCTGCGGATTTCACCCGGGCCAGGTCCCCCACTTCCGCTTCCGGATACTTTTTGTAAAGTATTTCGCACACGAAGAGTTCTAGAACGGCGTCCCCCAGAAACTCCAGCTTTTCGTTCGATTCCACGTTCTTTCTTCCCGCTTGATTTTGCTCGTTCGCGTAAGAACTGTGGCACAGAGCCCGAAAGAGAAGTTCTTCGTTCTTGAAGTTGATTCCTGTTTTTTTCTGAAACTCCTCCACGATCTTTCTCTCACTCTCGTTCAACGAACATCACCTCTTTCAAAACATCACCTTCCAGCGAGCAGAGGTAGTATTTTTTCTCATCCGTATCGATGATACCAAAAGTCGGACCGACCTCAGATTTTGGAAGAGAAACCGATCCCGGATTCAAAAGCAGCACCCCTTCGCACCTTTCTGCCAGAGGAACGTGAGTGTGACCGAAAAGAACTACACTGCATCCATGAGCCTGTGCCAGACTCACAGGATCTCCTCCTTCGTATTCGAACTGGTCGCCGTGAACAAGGAGTATCTTTACATCTCCTAAAAATTCCATTCCGATCCTGGGCATTTCCGGAATTTCCAGAACCCTTATGTCCACATCTGCATCACAATTTCCGCGTATGTACTTCACACGGTGTTTCTTCAAAAGTGATGAGAGTTCCTTTGGACTGTATCCCTCGGGAAGCGGATTTCTGGGGCCGTGGTAGAGAACATCACCAAGATGCCAGATTTCATCGAAATTCCCCGCACTTTTCAAAGCTTTCTCTGTGCAAGAAAGTGAACCGTGGGTATCCGAGATCACAAGAATCCTCAAGGTCAACCCCTCCTGATAACGAACTTTCCCGATAGAACAGAAATGGAGAACAAAACAACTGTCCAGAGCGAGACGACAAAGATCGAACGATTATCGATTGTGTGCTCCAGCTGGTATACCCTGAGGGCGTACATGGTTCTGAACACGGGCGTCGACATGGCGATTCTTCGGAGGATATCTGGCAAATTGCTTATAGGAATGGCAAAACCGCTTGAGAACAGGGATATTCCTATAACAGAAACACCGAGTATGTTTGCAAGACTCTTGTCGGGAGAAATGGAAGAAACCAGAAAACCCACGGACGTGTGAAGAAGAGCGTTGAGAAGGATGAGAACAGACGTAACGAAGAAGCCCAGGTTGTCTCCAGTCAGTATCACCGTCAGGGCGTAGGCTATGAAAGAAACGGAAGCTCCAATGACGGTGTAAGCAAGTATCTTCCCGCAGGCGTATTTCCGTGCCGGAAGGTTGTACACGAGGAACATCTCGTGCAGGTTTTTCTCTCTGTCGAGAAAGGTGGAGACACTCGCCAGTGATACGGTTATCAAAATCGCCGTGAAAAAGACGATGAAAGGGGAGATGAGATCAGAAAATCTGAGTTCTGAGTCTTTCAATGTCAATCTGGGTACGGGATAATCGGACTCTGTGAATATGTACCGGAGCACCTTGGGATCGAAGAAGGCACTTCCCTGGAAATCTGCCAGAACGGAATCGAGAACGTTGTATATCGCGGCGGCGAGGTGAAGATCGATGGGACTCGGGATGAAGATCATCTGGGTTGGCTGTTTGGAATACAGTTTCGCCGCGAAGCCCTTTGGAATCACTATGACCGCGTTCAGCTTTCCTTCCTTCAGAAGTTTTTCGTAGTTCTGATCGACTTTCACTATGTTTTCCTGTCTCAGGATGGTTCCAATGAATCTCATGACGAGGGAGGACCAGATGCTGTTGTCTTCGTTGTATATTCCGAGCTTCATCGTCTGAAGGTTGTACCCCTGCATGAAGAGAAGAGAGATCAGCACAACCAGAACGGGTGCAGCGATTATCATCATCAGTGAAGATCTTTTCTTCAAGATCCTCTTCAGTTCCACAATGGCTATTCTAAACATCGAGTTTCCACCTTCTTTCAACTTCCCTCACCACGTCTCTGTGGATTTCCTCTATGGAGCGTTTTCCATCCAGCACCACGATCCTTTCGGGATGTTCTCTGGCAAGCACGAGGTAGCCTTCCCTTACATGTTCGAGAAACTCTCTTTTTTCAAAGCGGTTGAGTTCTCCTTTTCTTTTGAGGGCCGTTTCGACGTCCACGTCTATGTAGAAAGTTAGGTCAGGAATCAGTCCATCCGTGGCAAGATCGTTCAACTCCTCCACGATCTCTTTTCCCAGGTTTCTTCCAAAACCCTGGTATGCAACACTGGAGTCCGTGTATCTGTCAAGAAGAACGGCGTATCCTTCGGAAAGGTACTGTTTTATTTCTGTCACAAGAAGATTTCTTGAAGCGAGAAATAGGAAGAGCTCAGCTTTGGGAGTTACTTCTTCCTCCAGAAGAATCTTTCTGATCTTCTCCCCCGTCTCCGTTCCGCCCGGCTCTCTCTTCAAGATCACTTTCTTTCCTCTCTTCTCCAGGTATTGAGCCAGAAGTTGGATCTGTGTGCTCTTCCCGGATCCGTCTATTCCCTCGAACGTTATGAACATTCCTTCCCCTCCTGGTCATAAGGATGAAGGCGACAAGATTGTTGGTGATATGGTACAGAACAGCGGGAAACAGAGATCCACTGACGGCTGCGCTGTGAGCGAATATGAGTGCGACGACGAATCTGTATATGAGGTTCGCAAAGGAAAATCTTTCGAAGCCCACGATCACGTTGAAGAGGTGAAGGAAAGAAAAACGAGTGCGTTGGTCCATATGTCGTTTCCGTTCAGTTTCAAAAAAACTCCCCTGAAGAACAATTCTTCCGAGAAAGGAGACAGAAAAACCACCGAAACCATCACGATGAAGCGGTTCATGAAGGGTGGAAATCGAACTTCACTGCCTCCTAAGAAAAACACGTTCACGAAGAGGAGAATCAGGAACCAGTGTAGATCGACAAAGCTTACTCTGAACGATGGAACGTATCGAAAGGCCACACACACCGTCACAGCGCCGGCGAGTCCCAGCAGGGACTGATAGAAGATCGCCTTCTCGAATCGGCGTATCCTGAAGAGATTTATCGAAAACATGAACGCAAGATACAAAGCAAGGGCTATTATCGAGTAAAGAACGCTCACGGCTTCACCTCACAGCAGTGTTGCTATCATGACCGCCTTTATGGTGTGCTTTCTGTTCTCCGCCTCGTCCCAGACCCTGCTCTGTTTTCCCTCGATCACCTCGTAGGTGACCTCCTGGCCCTTCACTGCGGGGAGGCAGTGCATGAAAATCGTTTCCGATTTACCCGTCATTTCCATCACTCTCTCGTTCACCTGATAAGGTTTTAAAAGAGCCATTCTTTCCTTTTCTTTGTCTTCCTCACCCATGGATGCCCACACGTCCGTGTAGATAACATCGGCACTTGCGAGTGCTTCTTCCAGATTTGACGTGAAAGAAACGCTCCCATCGGTTTCTTTCGCGATCTCCTGACACCTTTCGAATATGTCAGATCTGGGCTTGAGTTCTTCGGGACCACACGCCACGAAATTCATCCCCATCTTCGCACAGGCAATCATGAGGGAGGTCGCAACGTTGTTTCTGGTGTCCCCCATGAAAACAACCTTTACACCCTTCAATCTTCCGAAATTCTCCTCTATGGTCATCAGGTCGGCGAGCGCCTGTGTTGGGTGGAACTCGTCGGTGAGTCCGTTGTACACGGGAACACCGGAGTACTCAGCCAGCTTTTCCACAGTCTCCTGTTTGTAGCCCCTGAACATGATGGCGTCCACCATTCTTCCAAGGACGCGTGCGGTGTCCTCGAGAGATTCTTTCGCTCCAAGGTGTATGTCGTTCGGTGAGAGAAAGATCGGATGTCCTCCTTCTTCTGCAAAAGCGGTTTCAAAGGCGAGTCTCGTTCTCGTTGATCTCTTCTCGAAGATCATGGCGAGGGTCATTCCTTTGAACCTTTCGGTTCTCAGTTTGGATCTGCTTTCCATCTTCACCTGCTCTGAGATATCGAGAAGGTATCTGATCTCTTCAGGAGAAAAATCAAGAAGAGTGAGGAGAGATCTCCCTTTCAGATTCACAGACACACTTCACACCTCCACTATATCCTCGAGTTTTTCACCTGTGGATATGTACCTTACCGGTCTTCCTGTCTCTCTTTCTATGAAATCAACAAAGCGCTCGAAGTTCTTGTCTTCCAGAGATTTCCAGCCATCGAAGACTTCGTAGACAGGCTCTTTCTTTTCCAGATCTCTGAGTGAAACGAGATCTCTTCCATCGGAGTAGCGCACGCAGACCTTGATCTTTTCAAAACCGTTCAGCACATCTGCCTTGGTCATGACCAGAGAGTCGACACCGGAGATCTCAATGGCGTACCTGAGGAGCGGCAGATCGAGCCAGCCGCATCTCCTCGGCCGACCGGTCGTGGAACCGTATTCGTGTCCCGCTTTTCTCAACTTCTCTCCTTCTTCTCCTGTGAGCTCCGTCGGGAAGGGACCTTCCCCGACTCGTGTTGTGTACGCCTTGAAGACACCTAAAACTTCATCTACTTCTACAGGAAAGCCCATTCCCGCGCTCACGCCTGAGGAGGAACAGTTCATGCTCGTGACGTACGGGTACGTTCCCACGTCCAGATCCAGAAGAACCCCCTGTGTTCCTTCGAAGAGAACGCTCTTCTCTTCGAGGATTCTTTTCAACTGGACCGGTGAAACGACAAAGTCTTTTATTGTCTCATAGAAGGTGGAAAGATCTCCCATCATTTTCTCTGCGTCGAAATCCACCCCGTAGATCTTCTTCAAAGAGAGGTTCTTTTCGAGGAAATATCTGAGTTTTTCTTCGTTGCCGAGCTCTGCAACTCTCACGTTCACCCTCATAACCCTGTCAGCGCAAGCGGGACCTATTCCTCTTTTCGTAGTGCCTATTTTCAACACTTCGTCTATTATCCTGTCCATTTCTTTGTGCACTGGAAGAACCACGTGTGCGCTCTCAGAGATGAAGATTTCACCTGAATAATCGGGAAATTTCTCTTTCAATTCCCTCAATTCTTCTGTCAGCACCTGAGGATCCAGGAGAACACCGCTTCCTATGGCGATTCCTCTGTTTTTTGTGAAATCGGCCGAAGGGAGGAGGTGGTGTATCACCTTGAAATTTCCATAATTCACAGTGTGCCCGGCATTCGCTCCGCCCGAAAATCTCGCCACGATATCGTGGTATCTGGAAAGATACGTTACCACCTTGCCCTTTCCTTCGTCTCCCCATTGAAGACCCACCACAACGCGGTTCATTCGCTTCACTCCTTTTCAAAGCGTTCGAAGATGTGGTCCACGTGTTTCAAGTAGTAAGAGATATCGAAGAGTTCTTCGAGCTCTTCTTTGGTAACCAGTTTCTTAACCTCTTCATCCTCGAGGAGGTACTCGAGGAAGTGTTTTTCGGAGTTCCAGGTTTTCAGAGCGTTCCTCTGGACAATATCGTAAGCCTCTTTCCTTGTGAGTCCTTTCTCTATGAGTTTCAGCAGGACTCTCTGGGAGAACACGAGACCCTTTGTGAGATCTATGTTCTTCTTCATTCTTTCCTCGTTCACCTTCATGTTCCTCACCACGTTTGTGGCCGTGACGATCATGTAGTAAAGAGTCTGTGTGGCGTCGGGAAAAACGTATCTTTCAACGGAGGAGTGAGAAATGTCCCTCTCGTGCCAGAGCGCGATGTTTTCAAGGGAAGGATCGACGTACGCCCTCATCATTCTGGAAAGTCCCGTGAGTCGCTCGCAGGTGATGGGATTCTTCTTGTGGGGCATGGCACTCGAACCCCTCTGACCTTTCCTGAACGGTTCCTCCACCTCGAGCACTTCCGTTCTCTGAAGATGTCTGATCTCGACAGCGATCCTTTCTATCCCCGCTGCCACGATCGCGAGCGTGGACAGATAGAAAGCGTGACGATCCCTCGGGACAACCTGTGTGGAGACGGGTTCAGGTTTCAAGCCCAGGTACGAAAGCGCTTTTTCCTCCACCTCCGGTGGTACGTTTGCGTAGTTTCCAACAGCTCCACTGATCTTACCGTAAGAAACTTCCTCTATCGCCCTCTCAAGGCGTTGAACGTTCCTTTTCATCTCGGAATACCATCCGAGGACCTTCAAGCCGAAGGAGGTGGGTTCCGCGTGGACTCCGTGTGTTCTTCCGATGGTGGGGGTGTGTTTGTATCGATTCGCGACTTCCCAGAGCACGTCGCAGAACTCTTTTAGAGACTCTAACAGGATTTTCCCCGCTTCCACGAGAGCGAGGGAATTTGCGGTGTCGAGAACATCTGACGAAGTGAGACCGTAGTGGAAGAATCTCGAGTCTTCTCCTATCATCGATCCGATTCCTTCGACGAACGCCACCACATCGTGGTTCGTTCTCTCTTCTATCTTTTTGAACAGTTCCACATCTATCTTAGCGTTGTTCCTTATTCTCTCTGTCACTCCCTTCGGAATCGTTCCCAGTTCTTCGTACGCCCTCGTCACTGCCAGTTCCACTTCCAGCCATCTTCTGTACTTCGCTTCCTCCGTCCAGAGATCCTTCATCGGTGACAGCGAATACCTTTCTACCATCTTTTTCCCTCCCAAACAGATCTCTTATGAACACGAGCGCAACAACAGGAAAAACAAGATAAGAAGCCGTTGGATATTTAATACTCGCCACCTTCCACAACGCCATCGCAACGAGAAACCAGAAAAGCGATTTGAGAGGTATGTTCACGGCTTTTTTCTTTGCAAAACTGGTGACGATCAGAGGAAAGAAAGACAGCACCAGAAACAACTCGGCTCGATCGTAATTTGTTCCTTTCAAATATTCGAACCCCTCGAGGACGAGGAGAAAGATCAGACTCACATGAAACAGGGTCTTTTCTCTCTCACTTCTGGTGAAGAAGAAAATAACAGAAGCAATAAGAGCGAGTATCGATACAAAAGTACTGTCTTTCCAGGAGAGAACAGCGAAGATCAGAGAAAGTCCCAGGCCTAACATCATCGATCCCCTTTCACGAGAGTCACAGCAGTTTCCACATGGTAAGTCTGAGGAAACATGTCGAAAGGCTTCACCCTGACAATAGAATAGCCGTTCTCCACCAGCACCTTGAGGTCTCTCACCAGAGTAGAAGGCTCACATGAGACGTAAACGATCCTTTCGGGTGAAAGTCTCGCTATTTCTTTCATCGCTTCTGGACCCGCACCTGATCTCGGTGGGTCCAGGATTATCCTGTCTGCCCTTCCGCTGTAGTTTTTCAGAAAGTCCAGCACATCCTGTTCCACGTATTCTATGTTCCTTCTGCTGTTTATGTTCGCGTTAGCCTTTCCAGCCTTCACAGCGACCCTGCTGGATTCAACGGAGATCACCCTCGCTGCCGAAAAGGAAGTTCTCACGGAAAACGTACCGATACCCGCGTACAGATCCAGCACCACCTCGTTACCCTGAAGTGCCAGTTCTCTGTACACGTGATCTATCAGTTTGGATGTGATGGAGTAGTTGCTCTGGAAAAAGGCGGTCGGTGGAATTTGAAACCTTTCCCAGTCGAACTCTTCCACAATTACTCCTTCACCGTAGAGGGTTCTGTACGGTCCCCTTAGGACCACAGAGTCTTTAGAGTTCATCACATGAATGATGGAGTGAATCTTTGGAAATCTCTTTAACACAGCGCGAACCAGATCTCTTCCCCAGGGAAAGGATTCCGTCTTCGTCACAAAGATCACCATGAACTGGTCCGTGCTGAATGCGTACCTGATCACGAGGTGCTTGAGCACTCCCTTCCTCGTTTCCCAGTTGTAAACAGGAATGTTGAGTACCTGAACGGCCTCTTTTACAGTGTTCAGAATCTCACCCGTGCCTTCCGGTGCCACCTCACAGTCTTTTATGTCAATCACAAAATCGGAGTTTCTCTTTTTCAACCCCAATTTTCTTCCCTGAAAATGAAACTCCATTTTCGTCCTGTAGTGAAAAACAAGATCACTCGGCTCCACATCTTCCACTTCTACCTTCAGATTTGAGCGTTCGAAAAGATCGATCAATACCTCCTTTTTGTAACGAAGCTGGGTTTCATACTTCACATCCATCCAGTGACAGCCACCGCATCTTCCGAAGTACCTGCAGGGTGGTTTTGTTCGATCTTCGGATTCTTTCAGAAGGGAAACAACCTTTCCAAAAGAAAAATCCCTTTTCTCTCTGTAGGTCTTTATCAGGACTTCCTCACCGGGATACGCTCCTTCTACGAGAACTACCTTGCCGTTCGAAAGATGGGCAAGGCCGTAACCTCCGTTGATCATCTTCTGTATCCTCACCTGCTCCAGCAT

Protein sequences of DBSCAN-SWA_6

>NZ_CP003409|1622603:1632271|1624828_1625929_-|WP_038034230.1|DBSCAN-SWA
MFRIAIVELKRILKKRSSLMMIIAAPVLVVLISLLFMQGYNLQTMKLGIYNEDNSIWSSLVMRFIGTILRQENIVKVDQNYEKLLKEGKLNAVIVIPKGFAAKLYSKQPTQMIFIPSPIDLHLAAAIYNVLDSVLADFQGSAFFDPKVLRYIFTESDYPVPRLTLKDSELRFSDLISPFIVFFTAILITVSLASVSTFLDREKNLHEMFLVYNLPARKYACGKILAYTVIGASVSFIAYALTVILTGDNLGFFVTSVLILLNALLHTSVGFLVSSISPDKSLANILGVSVIGISLFSSGFAIPISNLPDILRRIAMSTPVFRTMYALRVYQLEHTIDNRSIFVVSLWTVVLFSISVLSGKFVIRRG
>NZ_CP003409|1622603:1632271|1624262_1624826_-|WP_012311294.1|DBSCAN-SWA
MRILVISDTHGSLSCTEKALKSAGNFDEIWHLGDVLYHGPRNPLPEGYSPKELSSLLKKHRVKYIRGNCDADVDIRVLEIPEMPRIGMEFLGDVKILLVHGDQFEYEGGDPVSLAQAHGCSVVLFGHTHVPLAERCEGVLLLNPGSVSLPKSEVGPTFGIIDTDEKKYYLCSLEGDVLKEVMFVERE
>NZ_CP003409|1622603:1632271|1622603_1623557_-|WP_012311292.1|DBSCAN-SWA
MKIIPVFLPYAGCKRRCVFCDQIKATGQTKVPSLDDIARIIEEYSRTSNEYELGFYGGTFTGLSEEKMEEYLRFVKRFPVVKSIRVSTRPDEINERKLKILKKYGVNVIEIGVQSFLDEVLERSKRGYTSEEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECGADMVRIHPTLVFEGTELHRMMEEGEYTPLNVEEAVDICSDLVCIFEGWGTKVIRIGYHVPVELRKYVVAGPLDPSLGDSVRKTTMKKVIERLKPSRIVVPENYLVWFEGAELEVGDEFRFDDLSYADALFFTGKEVVERWLNG
>NZ_CP003409|1622603:1632271|1627097_1628039_-|WP_038034227.1|DBSCAN-SWA
MSVNLKGRSLLTLLDFSPEEIRYLLDISEQVKMESRSKLRTERFKGMTLAMIFEKRSTRTRLAFETAFAEEGGHPIFLSPNDIHLGAKESLEDTARVLGRMVDAIMFRGYKQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIEENFGRLKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDIFERCQEIAKETDGSVSFTSNLEEALASADVIYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHCLPAVKGQEVTYEVIEGKQSRVWDEAENRKHTIKAVMIATLL
>NZ_CP003409|1622603:1632271|1629241_1630537_-|WP_029682909.1|DBSCAN-SWA
MVERYSLSPMKDLWTEEAKYRRWLEVELAVTRAYEELGTIPKGVTERIRNNAKIDVELFKKIEERTNHDVVAFVEGIGSMIGEDSRFFHYGLTSSDVLDTANSLALVEAGKILLESLKEFCDVLWEVANRYKHTPTIGRTHGVHAEPTSFGLKVLGWYSEMKRNVQRLERAIEEVSYGKISGAVGNYANVPPEVEEKALSYLGLKPEPVSTQVVPRDRHAFYLSTLAIVAAGIERIAVEIRHLQRTEVLEVEEPFRKGQRGSSAMPHKKNPITCERLTGLSRMMRAYVDPSLENIALWHERDISHSSVERYVFPDATQTLYYMIVTATNVVRNMKVNEERMKKNIDLTKGLVFSQRVLLKLIEKGLTRKEAYDIVQRNALKTWNSEKHFLEYLLEDEEVKKLVTKEELEELFDISYYLKHVDHIFERFEKE
>NZ_CP003409|1622603:1632271|1623553_1624276_-|WP_012311293.1|DBSCAN-SWA
MNESERKIVEEFQKKTGINFKNEELLFRALCHSSYANEQNQAGRKNVESNEKLEFLGDAVLELFVCEILYKKYPEAEVGDLARVKSAAASEEVLALVSRKMNLGKFLFLGKGEEKTGGRDRDSILADAFEALLAAIYLDQGYEKIKELFEQEFEFYIEKIMKGEMLFDYKTALQEIVQSEHKVPPEYVLVRTEKNDGDRIFVVEVRVDGKTIATGRGRTKKEAEKEAARIAYEKLLKERA
>NZ_CP003409|1622603:1632271|1626680_1627088_-|WP_039446235.1|DBSCAN-SWA
MSVLYSIIALALYLAFMFSINLFRIRRFEKAIFYQSLLGLAGAVTVCVAFRYVPSFRVSFVDLHWFLILLFVNVFFLGGSEVRFPPFMNRFIVMVSVVFLSPFSEELFFRGVFLKLNGNDIWTNALVFLSFTSST
>NZ_CP003409|1622603:1632271|1625921_1626515_-|WP_012311296.1|DBSCAN-SWA
MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEEEVTPKAELFLFLASRNLLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDLATDGLIPDLTFYIDVDVETALKRKGELNRFEKREFLEHVREGYLVLAREHPERIVVLDGKRSIEEIHRDVVREVERRWKLDV
>NZ_CP003409|1622603:1632271|1630951_1632271_-|WP_038034225.1|DBSCAN-SWA
MLEQVRIQKMINGGYGLAHLSNGKVVLVEGAYPGEEVLIKTYREKRDFSFGKVVSLLKESEDRTKPPCRYFGRCGGCHWMDVKYETQLRYKKEVLIDLFERSNLKVEVEDVEPSDLVFHYRTKMEFHFQGRKLGLKKRNSDFVIDIKDCEVAPEGTGEILNTVKEAVQVLNIPVYNWETRKGVLKHLVIRYAFSTDQFMVIFVTKTESFPWGRDLVRAVLKRFPKIHSIIHVMNSKDSVVLRGPYRTLYGEGVIVEEFDWERFQIPPTAFFQSNYSITSKLIDHVYRELALQGNEVVLDLYAGIGTFSVRTSFSAARVISVESSRVAVKAGKANANINSRRNIEYVEQDVLDFLKNYSGRADRIILDPPRSGAGPEAMKEIARLSPERIVYVSCEPSTLVRDLKVLVENGYSIVRVKPFDMFPQTYHVETAVTLVKGDR
>NZ_CP003409|1622603:1632271|1628042_1629236_-|WP_012311298.1|DBSCAN-SWA
MNRVVVGLQWGDEGKGKVVTYLSRYHDIVARFSGGANAGHTVNYGNFKVIHHLLPSADFTKNRGIAIGSGVLLDPQVLTEELRELKEKFPDYSGEIFISESAHVVLPVHKEMDRIIDEVLKIGTTKRGIGPACADRVMRVNVRVAELGNEEKLRYFLEKNLSLKKIYGVDFDAEKMMGDLSTFYETIKDFVVSPVQLKRILEEKSVLFEGTQGVLLDLDVGTYPYVTSMNCSSSGVSAGMGFPVEVDEVLGVFKAYTTRVGEGPFPTELTGEEGEKLRKAGHEYGSTTGRPRRCGWLDLPLLRYAIEISGVDSLVMTKADVLNGFEKIKVCVRYSDGRDLVSLRDLEKKEPVYEVFDGWKSLEDKNFERFVDFIERETGRPVRYISTGEKLEDIVEV

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012311292.1|1622603_1623557_-	radical SAM protein	R4TX69	Phaeocystis_globosa_virus	2.2e-10	29.3
WP_012311293.1|1623553_1624276_-	ribonuclease III	A0A2K9L5P0	Tupanvirus	3.0e-20	28.3
WP_012311294.1|1624262_1624826_-	phosphodiesterase	NA	NA	NA	NA
WP_038034230.1|1624828_1625929_-	ABC transporter permease	NA	NA	NA	NA
WP_012311296.1|1625921_1626515_-	dTMP kinase	M1PSC7	Streptococcus_phage	5.6e-33	41.9
WP_039446235.1|1626680_1627088_-	hypothetical protein	NA	NA	NA	NA
WP_038034227.1|1627097_1628039_-	ornithine carbamoyltransferase	M1I6M4	Paramecium_bursaria_Chlorella_virus	1.4e-22	29.3
WP_012311298.1|1628042_1629236_-	adenylosuccinate synthase	L7Y4J5	Megavirus	1.1e-51	33.5
WP_029682909.1|1629241_1630537_-	adenylosuccinate lyase	A0A1B3B081	Gordonia_phage	1.0e-18	28.5
WP_038034225.1|1630951_1632271_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	A0A2K5B251	Erysipelothrix_phage	4.7e-48	27.5