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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP021080 Streptomyces pluripotens strain MUSC 135 chromosome, complete genome 3 crisprs cas3,csa3,RT,DEDDh,WYL,cas4,Cas9_archaeal,c2c9_V-U4,DinG 0 1 6 0

Results visualization

1. NZ_CP021080
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021080_1 1661535-1661619 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021080_2 3686567-3686664 Orphan NA
1 spacers

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP021080_3 5951667-5951753 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP021080_1 1.1|1661563|29|NZ_CP021080|CRISPRCasFinder 1661563-1661591 29 NZ_CP026382 Sphingopyxis sp. MG plasmid pCMS1, complete sequence 63136-63164 6 0.793

1. spacer 1.1|1661563|29|NZ_CP021080|CRISPRCasFinder matches to NZ_CP026382 (Sphingopyxis sp. MG plasmid pCMS1, complete sequence) position: , mismatch: 6, identity: 0.793

ggttcgggtttcctgctcggttcgggttt	CRISPR spacer
gcgctgggtttcctgcacggttcgggatt	Protospacer
*  ..*********** ********* **

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 739292 : 879245 107 Tupanvirus(27.27%) protease,transposase,integrase attL 809464:809523|attR 827698:828679
DBSCAN-SWA_2 2157468 : 2237611 59 Streptococcus_phage(18.18%) protease,tRNA,transposase,integrase,holin attL 2187574:2187593|attR 2222351:2222370
DBSCAN-SWA_3 3161776 : 3196316 29 Mycobacterium_phage(50.0%) protease,transposase,holin NA
DBSCAN-SWA_4 3942355 : 3982962 34 Catovirus(20.0%) tRNA,transposase,integrase attL 3967888:3967931|attR 3978584:3978627
DBSCAN-SWA_5 5053415 : 5108828 47 uncultured_virus(50.0%) protease,transposase NA
DBSCAN-SWA_6 7220451 : 7295824 56 Mycobacterium_phage(22.22%) integrase,transposase,bacteriocin attL 7281008:7281024|attR 7299526:7299542
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage