CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP010327	Myroides sp. A21 chromosome, complete genome	6 crisprs	cas3,RT,DEDDh,WYL,csa3,PD-DExK	0	0	2	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP010327_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010327_1

999960-1000166

Orphan

Consensus_repeat	Method
GTTTACGGTGAACGGTTTACAGTTTACAGTTGCTCTCGACATCTATAAACAGA	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP010327_1

>merge|NZ_CP010327|1|999960-1000166|PILER-CR
GTTTACGGTGAACGGTTTACAGTTTACAGTTGCTTTCTACATCTATAAACAGACCGTTGACCTATGTTCTTATTTTGGTTTACGGTGAACGGTATACAGTTTACAGTTGCTCTCGACACCTATAAACAGACCGTTGACCTATGTTCTTATTTTGGTTTATGGTGAACTGTTTACAGTTTACAGTTGCTCTCGACATCTATAAACAGA

>NZ_CP010327|1|1|999960-1000166|PILER-CR
GTTTACGGTGAACGGTTTACAGTTTACAGTTGCTTTCTACATCTATAAACAGA	CCGTTGACCTATGTTCTTATTTTG
GTTTACGGTGAACGGTATACAGTTTACAGTTGCTCTCGACACCTATAAACAGA	CCGTTGACCTATGTTCTTATTTTG
GTTTATGGTGAACTGTTTACAGTTTACAGTTGCTCTCGACATCTATAAACAGA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010327.1\|WP_006259837.1\|1008396_1008936_+\|CopD-family-protein	unknown	unknown	gnl\|CDD\|367596
NZ_CP010327.1\|WP_006259828.1\|1000298_1000670_-\|four-helix-bundle-protein	unknown	unknown	gnl\|CDD\|319869
NZ_CP010327.1\|WP_006259823.1\|993949_995155_+\|tetracycline-resistance-MFS-efflux-pump	unknown	unknown	gnl\|CDD\|340946
NZ_CP010327.1\|WP_006259819.1\|987970_989953_-\|DNA-primase	unknown	unknown	gnl\|CDD\|235551
NZ_CP010327.1\|WP_006259829.1\|1000817_1001798_-\|oxygen-dependent-coproporphyrinogen-oxidase	unknown	unknown	gnl\|CDD\|376494
NZ_CP010327.1\|WP_006259826.1\|998377_998740_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006259836.1\|1007375_1008392_+\|ferrochelatase	unknown	unknown	gnl\|CDD\|234585
NZ_CP010327.1\|WP_006259830.1\|1001925_1002285_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006259825.1\|997849_998260_-\|c-type-cytochrome	unknown	unknown	gnl\|CDD\|227001
NZ_CP010327.1\|WP_039328658.1\|1002351_1003380_-\|uroporphyrinogen-decarboxylase	unknown	unknown	gnl\|CDD\|238368
NZ_CP010327.1\|WP_006259834.1\|1005015_1006266_-\|glutamyl-tRNA-reductase	unknown	unknown	gnl\|CDD\|234592
NZ_CP010327.1\|WP_006259833.1\|1004084_1005014_-\|hydroxymethylbilane-synthase	unknown	unknown	gnl\|CDD\|234612
NZ_CP010327.1\|WP_006259822.1\|992342_993692_-\|SWIM-zinc-finger-family-protein	unknown	unknown	gnl\|CDD\|309540
NZ_CP010327.1\|WP_006259824.1\|995683_997285_-\|fumarate-hydratase	unknown	unknown	gnl\|CDD\|237955
NZ_CP010327.1\|WP_039328652.1\|990046_991024_-\|polyprenyl-synthetase-family-protein	unknown	unknown	gnl\|CDD\|173833
NZ_CP010327.1\|WP_006262354.1\|1006498_1007371_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP010327.1\|WP_006259818.1\|987463_987943_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006259821.1\|991130_992171_-\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|223890
NZ_CP010327.1\|WP_006262347.1\|998878_999871_-\|porphobilinogen-synthase	unknown	unknown	gnl\|CDD\|236450
NZ_CP010327.1\|WP_006259832.1\|1003417_1004083_-\|uroporphyrinogen-III-synthase	unknown	unknown	gnl\|CDD\|119440

Protein	Function_ID	Function_description	E-value
NZ_CP010327.1\|WP_006259837.1\|1008396_1008936_+\|CopD-family-protein	gnl\|CDD\|367596	pfam03653, UPF0093, Uncharacterized protein family (UPF0093).	2.26822e-43
NZ_CP010327.1\|WP_006259828.1\|1000298_1000670_-\|four-helix-bundle-protein	gnl\|CDD\|319869	cd16377, 23S_rRNA_IVP_like, 23S rRNA-intervening sequence protein and similar proteins. A family of functionally uncharacterized bacterial proteins, some of which are encoded by an atypically large intervening sequence present within some 23S rRNA genes. The distantly related bAvd protein, which also forms a homopentamer of four-helix bundles, has been suggested to interact with nucleic acids and a reverse transcriptase.	1.87124e-44
NZ_CP010327.1\|WP_006259823.1\|993949_995155_+\|tetracycline-resistance-MFS-efflux-pump	gnl\|CDD\|340946	cd17388, MFS_TetA, Tetracycline resistance protein TetA and related proteins of the Major Facilitator Superfamily of transporters. This subfamily is composed of tetracycline resistance proteins similar to Escherichia coli TetA(A), TetA(B), and TetA(E), which are metal-tetracycline/H(+) antiporters that confer resistance to tetracycline by an active tetracycline efflux, which is an energy-dependent process that decreases the accumulation of the antibiotic in cells. TetA-like tetracycline resistance proteins belongs to the Eukaryotic Solute carrier 46 (SLC46)/Bacterial Tetracycline resistance (TetA) -like (SLC46/TetA-like) family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	2.80685e-129
NZ_CP010327.1\|WP_039328658.1\|1002351_1003380_-\|uroporphyrinogen-decarboxylase	gnl\|CDD\|238368	cd00717, URO-D, Uroporphyrinogen decarboxylase (URO-D) is a dimeric cytosolic enzyme that decarboxylates the four acetate side chains of uroporphyrinogen III (uro-III) to create coproporphyrinogen III, without requiring any prosthetic groups or cofactors. This reaction is located at the branching point of the tetrapyrrole biosynthetic pathway, leading to the biosynthesis of heme, chlorophyll or bacteriochlorophyll. URO-D deficiency is responsible for the human genetic diseases familial porphyria cutanea tarda (fPCT) and hepatoerythropoietic porphyria (HEP).	3.43587e-177
NZ_CP010327.1\|WP_006259829.1\|1000817_1001798_-\|oxygen-dependent-coproporphyrinogen-oxidase	gnl\|CDD\|376494	pfam01218, Coprogen_oxidas, Coproporphyrinogen III oxidase.	0
NZ_CP010327.1\|WP_006262347.1\|998878_999871_-\|porphobilinogen-synthase	gnl\|CDD\|236450	PRK09283, PRK09283, porphobilinogen synthase.	0
NZ_CP010327.1\|WP_006262354.1\|1006498_1007371_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.83032e-26
NZ_CP010327.1\|WP_006259825.1\|997849_998260_-\|c-type-cytochrome	gnl\|CDD\|227001	COG4654, COG4654, Cytochrome c551/c552 [Energy production and conversion].	4.84752e-12
NZ_CP010327.1\|WP_006259834.1\|1005015_1006266_-\|glutamyl-tRNA-reductase	gnl\|CDD\|234592	PRK00045, hemA, glutamyl-tRNA reductase; Reviewed.	2.78677e-103
NZ_CP010327.1\|WP_006259833.1\|1004084_1005014_-\|hydroxymethylbilane-synthase	gnl\|CDD\|234612	PRK00072, hemC, porphobilinogen deaminase; Reviewed.	4.33503e-109
NZ_CP010327.1\|WP_006259822.1\|992342_993692_-\|SWIM-zinc-finger-family-protein	gnl\|CDD\|309540	pfam04434, SWIM, SWIM zinc finger. This domain is found in bacterial, archaeal and eukaryotic proteins. It is predicted to be organized into two N-terminal beta-strands and a C-terminal alpha helix, thus possibly adopting a fold similar to that of the C2H2 zinc finger (pfam00096). SWIM is thought to be a versatile domain that can interact with DNA or proteins in different contexts.	0.00135108
NZ_CP010327.1\|WP_006259824.1\|995683_997285_-\|fumarate-hydratase	gnl\|CDD\|237955	PRK15389, PRK15389, fumarate hydratase; Provisional.	0
NZ_CP010327.1\|WP_039328652.1\|990046_991024_-\|polyprenyl-synthetase-family-protein	gnl\|CDD\|173833	cd00685, Trans_IPPS_HT, Trans-Isoprenyl Diphosphate Synthases, head-to-tail. These trans-Isoprenyl Diphosphate Synthases (Trans_IPPS) catalyze head-to-tail (HT) (1'-4) condensation reactions. This CD includes all-trans (E)-isoprenyl diphosphate synthases which synthesize various chain length (C10, C15, C20, C25, C30, C35, C40, C45, and C50) linear isoprenyl diphosphates from precursors, isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). They catalyze the successive 1'-4 condensation of the 5-carbon IPP to allylic substrates geranyl-, farnesyl-, or geranylgeranyl-diphosphate. Isoprenoid chain elongation reactions proceed via electrophilic alkylations in which a new carbon-carbon single bond is generated through interaction between a highly reactive electron-deficient allylic carbocation and an electron-rich carbon-carbon double bond. The catalytic site consists of a large central cavity formed by mostly antiparallel alpha helices with two aspartate-rich regions (DDXX(XX)D) located on opposite walls. These residues mediate binding of prenyl phosphates via bridging Mg2+ ions, inducing proposed conformational changes that close the active site to solvent, protecting and stabilizing reactive carbocation intermediates. Farnesyl diphosphate synthases produce the precursors of steroids, cholesterol, sesquiterpenes, farnsylated proteins, heme, and vitamin K12; and geranylgeranyl diphosphate and longer chain synthases produce the precursors of carotenoids, retinoids, diterpenes, geranylgeranylated chlorophylls, ubiquinone, and archaeal ether linked lipids. Isoprenyl diphosphate synthases are widely distributed among archaea, bacteria, and eukareya.	6.95508e-88
NZ_CP010327.1\|WP_006259836.1\|1007375_1008392_+\|ferrochelatase	gnl\|CDD\|234585	PRK00035, hemH, ferrochelatase; Reviewed.	1.90667e-129
NZ_CP010327.1\|WP_006259819.1\|987970_989953_-\|DNA-primase	gnl\|CDD\|235551	PRK05667, dnaG, DNA primase; Validated.	1.61635e-172
NZ_CP010327.1\|WP_006259821.1\|991130_992171_-\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|223890	COG0820, COG0820, Predicted Fe-S-cluster redox enzyme [General function prediction only].	2.78192e-133
NZ_CP010327.1\|WP_006259832.1\|1003417_1004083_-\|uroporphyrinogen-III-synthase	gnl\|CDD\|119440	cd06578, HemD, Uroporphyrinogen-III synthase (HemD) catalyzes the asymmetrical cyclization of tetrapyrrole (linear) to uroporphyrinogen-III, the fourth step in the biosynthesis of heme. This ubiquitous enzyme is present in eukaryotes, bacteria and archaea. Mutations in the human uroporphyrinogen-III synthase gene cause congenital erythropoietic porphyria, a recessive inborn error of metabolism also known as Gunther disease.	2.56511e-32

>NZ_CP010327.1|WP_006262347.1|998878_999871_-|porphobilinogen-synthase
MFPLQRGRRLRTNESIRSLVRETIVTPQDFMFPMFIAEGTNVQEAIPSMPGMFRRSVDLTVKEVKELYALGIRAVNIYVKVSDHLKDNAGTEAWNPNGLMQTAIKAIKDACPGMIVMPDVALDPYSIYGHDGIIENGVVVNDPTVDALTKMSVSHAEAGADFVAPSDMMDGRILRMREALDQSGFTNVGIMSYSAKYASAFYGPFRDALDSAPRADVEIPKDKKTYQMDYANRIEAVKEALYDVEEGADILMVKPGMAYLDIVREVKDAVNVPVAVYQVSGEYAMVKAASERGWLDHDQIMMEQLTCIKRAGASIISTYFAKEASILLNK
>NZ_CP010327.1|WP_006259826.1|998377_998740_-|hypothetical-protein
MTPDFKNKTYRLAEFILLVKDRKERTTEYDPAYQYAIYAVEDEADVELEIYVGDPVEVTEDDEEIYPDAVTELDMWYLCSDEDIQDVVDLAVSQKPTVTVEELIMALDYYLTIDDFIDFD
>NZ_CP010327.1|WP_006259825.1|997849_998260_-|c-type-cytochrome
MTKIIKTSLLLLATISVVACGGKDDKTQPEAVYESERGEVAEMTMSEKIKLGEDIFKGKGNCASCHQTDKKIIGPSVKEILQVYDKHNADLVSFLRGNEEPIVDPSQFIIMQANLEITKKFSDLEMEALIAYMRSL
>NZ_CP010327.1|WP_006259824.1|995683_997285_-|fumarate-hydratase
MDFIYQDPYPIQKDDTQYKKISSDYVKVEKLGDREILVVDPKAIEMIAETAMTDVSFMLRTSHLEKLKAILDDPEATDNDRFVAYNLLQNAKVAVEGQLPSCQDTGTAIVVAKKGENVYTGSNDAESLSKGIFETYQKKNLRYSQIVPISMFEEKNSGSNLPAQIDIYATQGAKYEFLFLAKGGGSANKTFLYQKTKSLLNDKNLTEFIKEKIMDLGTAACPPYHLALVIGGTSAEANLAAVKKASAGYYDNLPTSGNMGGQAFRDLEWEKKLQLICQESKIGAQFGGKYFTHDVRVIRLPRHAASCPVGLGVSCSADRNIKAKITAEGLFVEQLETDPGRFLPAVAPHLEEPVVIDLDKPMKEQLAELTKHPIKTRVMLNGTVIVARDIAHAKIQEMLDNGQEMPEYFKNHPVYYAGPAKTPDGMPSGSFGPTTAGRMDPYVDSFQAVGGSMIMLAKGNRSQAVTNACKKHGGFYLGSIGGPAAILAKENILSVEVVDFPELGMEAVRKIVVKDFPAFIITDDKGNDFFADL
>NZ_CP010327.1|WP_006259823.1|993949_995155_+|tetracycline-resistance-MFS-efflux-pump
MQSNKINSIVIFITITIILDSAGFGIIFPVLPELLEHVLHADLSTAAKYGGVLTLAYAFMQFIFAPILGIISDRYGRRRVLLLSLFGFSIDCFIMALAHSYWLLFISRLIAGVTGATFAVASATITDVTDEDNRTKYFGYLNAAFNIGFIIGPLVGGLLGEYHFTYPFYFAGILGLLNVLYGYFFFPETNTSRSLKRLSLKEISPLQSLKSIKRFKQLSLLFIVFFLLSAASHSMESTWSFYTMIQFDWSKQQVGLSLTIIGIIGFLVQAYLLQYLSTKLSDQRLVYIGLLTCFIGLLLLSYCVTEIQLWVGITLYLLGSIQQTGFQSMLSKSLDQQHQGELQGVLGSLNGLTTIVAPPVFTYCFYLYTQDNTLPYLPGIAFAIAALLLLISLLLLLRHKK
>NZ_CP010327.1|WP_006259822.1|992342_993692_-|SWIM-zinc-finger-family-protein
MNDLLSYIYNNPSSLTKGKGGDELFLAKYSEIQKKTDAPCFFWGNVKDPFIMARCLITLSNVVKSSFNLSPADLAKLKDPIATAGDGRVRFEGFSHCAGVYARVDVLPDGLDGEFLENGTTNVDFNQPMLTALNSIKQKENVLLSIGQKEVSIQTEDKKIVERKVPLPIKWIKGLSTVQIYLSKAEKVHTFNKIQTQQLFRGIPKGAIKTDYYLTVRGNMPVFTPVKSANAVCVGGIHRLRLLEPLLPYIDTMQVYPHPDMQSTTWQLYFGDIRFSLSLSREAFRGFSGEGAALESLIDDVDDEWIDAMDKYAYANQRFNPTMFAMEEGMSFTDADSLTGRLAAMGLLGFDLDDNAFFYRRLPFKLERILSLNPRLKNAEKLIAENKVEIISDANGRVEARVEGTGGVRHTVILDGDQERCTCEWYGKYQGDRGMCKHVLAVKKVTVKG
>NZ_CP010327.1|WP_006259821.1|991130_992171_-|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MQIDKKDIRSLSKEQLRDFFVSQGDKAFRGNQVYEWLWSKGAHSFEDMSNLSLATREMLDANFVINHIKVDSMQVSTDGTIKNGVKLHDGLIVESVLIPTETRTTACVSSQVGCSLDCEFCATARLKRMRNLNPDEIYDQVLTIDQQSRQNHGHPLSNIVFMGMGEPLMNYNNVQKAIEKITSEEGLGMSPKRITVSTSGLPKMIKKLADDGVKFKLAVSLHSAIEETRNRIMPFTKNFPLTELRESLQYWYSKTKSRVTYEYVIWKGINDDKASVDALVKFCKYVPCKVNLIEYNPIDDGEFQQADERATNSYIAALEKNDITVVVRRSRGKDIDAACGQLANKS
>NZ_CP010327.1|WP_039328652.1|990046_991024_-|polyprenyl-synthetase-family-protein
MNIVQQIKQPIQNEMELFEKKFRNSMTTKVALLNRITYYIVNRKGKQMRPMFVFLVAKMVAGEVNERTYRGASVIELIHTATLVHDDVVDDSNKRRGFFSLNALWKNKIAVLVGDYLLAKGLLLSIDNGDFDLLRIISVAVREMSEGELLQIEKARRLDITEEVYYEIIRQKTATLIAACCSLGAAAVDPDNAELIEKMRKFGELIGMAFQIKDDLFDYTDGPIGKPTGIDIKEQKMTLPLIYTLNTCEPKEKKWLINSVKNHNEDKRRVKEVIAFVKQKGGLEYATTKMVEYQQEALNILQEFPESTYREALFTMVNYVIERKK
>NZ_CP010327.1|WP_006259819.1|987970_989953_-|DNA-primase
MISKSTIDAVFDAARVEEVIGDFVTLKKSGSNYKGLSPFVNEKTPSFMVSPVKQIWKDFSSGKGGNAISFIMEHEHFSYPEAIRYLAKKYGIEIEETEQSDEEKEQLNEKESMFIVSEFAKKYFEETLFNAEEGKAIGMTYFKERGFTQETIKEFGLGYSPDQWSAFTDAALQKGYSLEYLEKTGLTIVKEDRKFDRFKGRVMFPIQSMSGRVLGFGGRILITDKKAAKYLNSPESDIYHKSKVLYGIYHAKQEIAKQDNCFLVEGYTDVIQMHQTGIKNVVASSGTALTPDQIRLISRLTKNITMLFDGDAAGIRASLRGVDLILEAGMNVRVCPLPDGEDPDSFARKHSKEQLDEYFKNNATDFIRYKANLLMGEAKNDPIKKAELIRDMVQSISKIPDQIQREIYVQECARIMDISEDVIFNSLAQIGRKELAEANKKYTQERKQMEVVHSEQQPKEAIDPQYNLERKIIEILLLYGNMEELFIELLLDVNEDNEVIEVEHKVEQKVYERIYLSLQEDEVQLTNPMFKVIYKDIMDYYHHNAWDLEKYLKTLDPEMAQEVTNIIMEDEKEALHNWESQNIIVKQKEQGVSQYVTETILTLRMFLLNTMIEKYKVKLKDSDEKRSYEMLTLIMDYTSLMNMFSKRLGQVTSRFKTIED
>NZ_CP010327.1|WP_006259818.1|987463_987943_+|hypothetical-protein
MKKFLLFLLTILSISLAGCSSDDDYCGNETYRSLQLNETPNFSPLNFYVKGLKGDSFIVIRNERDFQNRVHGAQYYRNVIDWRYDELIIGQKYEERFSKIIDISTFYKESCNYNFQNILNVEIKVNKGYRYNGYITYHTIVPKTKSEQYDVITTVQFYN
>NZ_CP010327.1|WP_006259828.1|1000298_1000670_-|four-helix-bundle-protein
MIDYRNYNVWKLSHELVLKIYPLLNLYPKYEERNLIDQIRRAVVSIPTNIAEGCGKDTQKELVRYLYIASGSAHEVEYLIFLSKDLGYLNENDFYSVQNDIVSIKKMLVVLIKRIRETMDSKK
>NZ_CP010327.1|WP_006259829.1|1000817_1001798_-|oxygen-dependent-coproporphyrinogen-oxidase
MAELRNNSFFNDEYPDRERICTIYNMKEQFYQYIQQLQDTITKGLEDIDGKAKFQEDLWERPEGGGGRTRVIENGAVFEKGGVNISAVHGPLPVAMQKYFNVGDVDFFACGLSLVIHPKSPMVPTVHANWRYFEMYDKEGTVVRSWFGGGQDLTPYYLFDEDATHFHTVCKTACDKHNPAFYPLYKKQCDEYFWNAHREEARGIGGLFFDRLEVTEEMSMQQWYDFVTEVGDSFLEAYAPIVERRMDTPYSNEHRTWQEIRRGRYVEFNLVHDKGTLFGLKTNGRIESILMSLPPHVQWVYDHHPEENSWEEKLLKVLANPVDWMK
>NZ_CP010327.1|WP_006259830.1|1001925_1002285_-|hypothetical-protein
MLNKGTKSEEERRIESIVQKLSSIGFTPEDKKFIEDLDVELQKIGLSYEQLLITEGKDLALHLHKFNFPWDKMEEFTDLLVKWSSQEPLLKAKAKAVYQYIQDESKAFSFNIMTKISRL
>NZ_CP010327.1|WP_039328658.1|1002351_1003380_-|uroporphyrinogen-decarboxylase
MIKNDLFLRALKGETVERPPVWMMRQAGRYLPEFRELRDKYDFFTRCRMPEIAAEITVQPIRIVKPDAAILFSDILVVPQAMNIDVEMRPGVGPWVPNPIRSAKDVEQVIVPNIEETLGYVMDAIKVTKEMLNDEVPLIGFAGSPWTIFCYAVEGKGSKSFDLAKGMCFSDPVAAHTLLQKITDTTILYLKEKVKAGVNAVQIFDSWGGMLSPVDYQEFSWQYINQIVEALADITPVIVFGKGCWFALPEMAKSKASALGVDWTCSPQNARLFTGGDITLQGNFDPSRLMSPIPTIKKMVHEMIDAFGKDKYIVNLGHGILPHIPVDHAKAFIEAVKEYEHK
>NZ_CP010327.1|WP_006259832.1|1003417_1004083_-|uroporphyrinogen-III-synthase
MSFNPTILSTRKIKASVLDTVALGKVHLVEQDYILTEHLVFDLDAVHEYVLFTSQNAVKSVISQGYREVLNKKPALCVGIKTKELLEENGWEVKAWAHYAKELAPIIVQDYKDRYITFFSGSIRRDLLPDAFRANGVVFNEFTVYQTVLNPVKNEYKIDGLCFYSPSAIESYLQQNSITTEVCFCIGDTTAEPLKGVTQNIVIAKQPTVEATLQACVDYYK
>NZ_CP010327.1|WP_006259833.1|1004084_1005014_-|hydroxymethylbilane-synthase
MGRIIRIGTRDSELAMWQAKTVEQSLQKLGYKTELVPVKSTGDLVLDKPLYEMGITGIFTKTLDVAMIKKEVDIAVHSMKDVPTALPQGIVQGAVLKRANTVDILLHKGDTSFMSEEVEAVVATGSLRRKAQWLNRFPKHTTVDLRGNVNTRMEKLQNSDWNGAIFASAGLDRIKKKPSNFINLDWMIPAPAQGAMVVVVNADDNHALDAVAQLNDYETEMTTYIERQFLRTLEGGCTAPIGALATYNDHDDTINFKGVLFSLDGQQKFEVNKVVDIAEWKKLGFFAAKEILENGGSELMETLRQQLKK
>NZ_CP010327.1|WP_006259834.1|1005015_1006266_-|glutamyl-tRNA-reductase
MDKIDKTKPATFYAVGLSYKKADAEMRGKFSLSDEAKDNLLTQAKNEGIESLIVISTCNRTEIFGFAQHPFELIKLLCDNSNGTVDDFRNVAYVYKTKEAIEHLFRVGTGLDSQILGDFEIISQIKNAFYLAKEKELTTNYFERLVNAVIQASKRIKNETELSSGATSVSFASVQYIMDHVEDISNKNILLFGTGKIGRNTCENLVKHTKNDHITLINRTKEKALEVAGKFNLIVKDYADLQAEIRKSDVLIVATGAQKPTVDKALLNLTKPLVILDLSIPKNVSDDVTEIEGVELIHLDYLSQMTDKTIERRREFIPQAEEIIEEIMSEFIAWTKMRKFAPTIHALKSKLEQIKDGELDYHKKKYDNFDSEQAELISMRIIQKITTHFANHLRHEDTVVDQSIEWIEKVFHIESN
>NZ_CP010327.1|WP_006262354.1|1006498_1007371_+|helix-turn-helix-transcriptional-regulator
MSPTEEIIIDDNFSILRFENNLTENITFQREMGTDVIQFYFGLKGSAKFVFNQGAYSLPLNEEKFLILYNPQKQLPVHLEISPNTWVISVLISIKKFHALFSTEAEFIGFLTGENRDKKYYSEEEITPSMAIVLNQLFNFYMNPTIKKLYYTGKTYELLSLLFNQNEDQNIENCPFLSDEDDVVKIKKAKDIIISKMAEPPTLQELADSVGINIKKLKMGFKQIYGDSVFSFLFDYKMEYARKLLDNGSYNVNEVGLKIGYSSASHFIAAFKKKFGTTPKKYLMSLNTNN
>NZ_CP010327.1|WP_006259836.1|1007375_1008392_+|ferrochelatase
MQGILLVNLGSPKSPTAKDVKPYLGEFLMDERVIDMPYILRSLLVKGIILNTRPKKSAEAYSKIWWKEGSPLIVISERQQKKVQAKVDIPVALAMRYGEPSIQTGLQELKDKGIDDVLMIPLYPQFAMATTETINVLAEEVRQKYFPQMKVTSFPAFYNKKEYVDALAHTIQGHLEGYDYDHIVFSYHGVPERHIRKSDVTKGHCTIDGSCCQTASKAHEFCYRHQCLETTRQVVEKLNIPADKYTNSFQSRLGMDKWLQPPTDATVNGLAEKGIKKLAVVTPAFVADCLETLEEIGMEAHDEFLKHGGEEFRTIPCMNDDDMWIDAMVTWIKEWQNK
>NZ_CP010327.1|WP_006259837.1|1008396_1008936_+|CopD-family-protein
MLYLYLKALHIIFIVCWFAGLFYIVRLFVYYSETKDMPEVQSNILRDQYTIMTNRLWNIITWPAAVLATIFGIWMLIAIPAWLSQPWMHVKLLFVVALIAYHLKCHQFVKQINNRTMTKTSSFFRIWNEGATLILFSVVFLVILKSTFNWIFGVVGLVGLSILLMLGIRLYKRIRDSRK

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Crispr_ID: NZ_CP010327_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010327_2

1732708-1732797

Orphan

Consensus_repeat	Method
TTTTTATTTGATGGTTATTTGATA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010327_2

>merge|NZ_CP010327|2|1732708-1732797|CRISPRCasFinder
TTTTTATTTGATGGTTATTTGATACAAACCTAGTTTTAAAAGTTAAACTACTTAAAATCAGTTGTTTTTTTATTTGATGGTTATTTGATA

>NZ_CP010327|2|1|1732708-1732797|CRISPRCasFinder
TTTTTATTTGATGGTTATTTGATA	CAAACCTAGTTTTAAAAGTTAAACTACTTAAAATCAGTTGTT
TTTTTATTTGATGGTTATTTGATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010327.1\|WP_006257441.1\|1739935_1740328_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|376719
NZ_CP010327.1\|WP_039328444.1\|1726302_1727820_-\|IS66-family-transposase	unknown	unknown	gnl\|CDD\|376980
NZ_CP010327.1\|WP_006260546.1\|1737829_1738117_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP010327.1\|WP_006257449.1\|1734988_1735288_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184361
NZ_CP010327.1\|WP_006257461.1\|1721273_1721567_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_039328803.1\|1733545_1734058_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_036496800.1\|1729594_1730821_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271185
NZ_CP010327.1\|WP_006257460.1\|1721813_1722689_+\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|131350
NZ_CP010327.1\|WP_039328805.1\|1735386_1736295_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379044
NZ_CP010327.1\|WP_006257459.1\|1722877_1723252_-\|DUF983-domain-containing-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257458.1\|1723389_1724118_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_039328445.1\|1728207_1728495_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_039328804.1\|1734060_1734987_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_CP010327.1\|WP_039328801.1\|1732890_1733361_-\|JAB-domain-containing-protein	unknown	unknown	gnl\|CDD\|163702
NZ_CP010327.1\|WP_006257457.1\|1724447_1725038_+\|cytochrome-b/b6-domain-containing-protein	unknown	unknown	gnl\|CDD\|376516
NZ_CP010327.1\|WP_006257444.1\|1739463_1739865_-\|methylmalonyl-CoA-epimerase	unknown	unknown	gnl\|CDD\|319912
NZ_CP010327.1\|WP_039328812.1\|1738208_1739033_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006260545.1\|1736489_1737731_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273716
NZ_CP010327.1\|WP_039330381.1\|1727869_1728154_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	unknown	unknown	gnl\|CDD\|377551
NZ_CP010327.1\|WP_039328800.1\|1731016_1732132_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718

Protein	Function_ID	Function_description	E-value
NZ_CP010327.1\|WP_039328444.1\|1726302_1727820_-\|IS66-family-transposase	gnl\|CDD\|376980	pfam03050, DDE_Tnp_IS66, Transposase IS66 family. Transposase proteins are necessary for efficient DNA transposition. This family includes IS66 from Agrobacterium tumefaciens.	2.944e-111
NZ_CP010327.1\|WP_006257449.1\|1734988_1735288_-\|hypothetical-protein	gnl\|CDD\|184361	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ.	0.000125586
NZ_CP010327.1\|WP_006257441.1\|1739935_1740328_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|376719	pfam02033, RBFA, Ribosome-binding factor A.	3.51365e-31
NZ_CP010327.1\|WP_039328805.1\|1735386_1736295_-\|hypothetical-protein	gnl\|CDD\|379044	pfam13155, Toprim_2, Toprim-like. This is a family or Toprim-like proteins.	2.26785e-15
NZ_CP010327.1\|WP_036496800.1\|1729594_1730821_+\|site-specific-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.77224e-33
NZ_CP010327.1\|WP_006257460.1\|1721813_1722689_+\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|131350	TIGR02297, AraC-type_DNA-binding_domain-containing_protein, 4-hydroxyphenylacetate catabolism regulatory protein HpaA. This putative transcriptional regulator, which contains both the substrate-binding, dimerization domain (pfam02311) and the helix-turn-helix DNA-binding domain (pfam00165) of the AraC famil, is located proximal to genes of the 4-hydroxyphenylacetate catabolism pathway.	1.02145e-25
NZ_CP010327.1\|WP_039328801.1\|1732890_1733361_-\|JAB-domain-containing-protein	gnl\|CDD\|163702	cd08071, MPN_DUF2466, Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.	1.21465e-46
NZ_CP010327.1\|WP_039328804.1\|1734060_1734987_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	5.14244e-13
NZ_CP010327.1\|WP_006260546.1\|1737829_1738117_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.84193e-06
NZ_CP010327.1\|WP_006257457.1\|1724447_1725038_+\|cytochrome-b/b6-domain-containing-protein	gnl\|CDD\|376516	pfam01292, Ni_hydr_CYTB, Prokaryotic cytochrome b561. This family includes cytochrome b561 and related proteins, in addition to the nickel-dependent hydrogenases b-type cytochrome subunit. Cytochrome b561 is a secretory vesicle-specific electron transport protein. It is an integral membrane protein, that binds two heme groups non-covalently. This is a prokaryotic family. Members of the 'eukaryotic cytochrome b561' family can be found in pfam03188.	5.17006e-08
NZ_CP010327.1\|WP_006257444.1\|1739463_1739865_-\|methylmalonyl-CoA-epimerase	gnl\|CDD\|319912	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE). MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.	4.01437e-55
NZ_CP010327.1\|WP_006260545.1\|1736489_1737731_-\|hypothetical-protein	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	0.00192142
NZ_CP010327.1\|WP_039330381.1\|1727869_1728154_-\|IS66-family-insertion-sequence-element-accessory-protein-TnpB	gnl\|CDD\|377551	pfam05717, TnpB_IS66, IS66 Orf2 like protein. This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.	8.45259e-34
NZ_CP010327.1\|WP_039328800.1\|1731016_1732132_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.00594e-35

>NZ_CP010327.1|WP_039328800.1|1731016_1732132_+|Fic-family-protein
MDYNLEKAVDYHYGVFPPKSIDYTLFIQELVRATDALARFDQMLKNLHNTEILLAPLRNQEAVISSRIEGTISTMDEILQYEADHEGEDITTAKTDVIETILYQRALKNAQSALESGYDFSLSFLKQMHQQLLYLGRGANKSPGEFKKEQNYLADRLKREIQFIPIRPENLVDGLEQLFKFLENSDFPPLIKTAIMHLEFEALHPFKDGNGRIGRMLITLNLWREKILSEPHFYISGYFEENKDEYIEQMRNVSKTKDWNEWILFFLKAVENQAIKNLEIAESIKSLYETTKTEFSELLSSKWNIEILDFIFTYPVFRNNKFVSTTKIPNATAVLMIKKLVDNGYLVLREESSGRRAAMYSFEPLMKLVRV
>NZ_CP010327.1|WP_036496800.1|1729594_1730821_+|site-specific-integrase
MKTSLKIVLKKTKLSDGTYPINLRVTINRRSKFYKTPYSTAPKFWNAKVGEFTSKFPNFLQANRILSTLKQDASKVLDLMIEQEKEFTLEVFDSLLRPEKVEIVKFVAFFQNRIEQFKEAGQVSSASSYNDSLKALKRFKPGVIKYEFSQIDYSFLVAFEADLRSRGCTNGGIGIYMRNIRAIYNSAIKSKIASLENYPFRDYVISKLKSTKIKKALTKEELQLLLDYDFSENTEGAKVLYTYLFSFFCRGMNFTDIAELKWDDINSNRFSYIRNKTGVAINVKIPENKDLDTILNYFRIYRPFDTDYIFSILDKDLSLYTKEELRARKSSVRDYYNKQLNIIAKECGIKTKITFYTARHTFATLSLKKGVNLYMLKQAFGHQSIKTTEAYVEDFNREELDQAFENLF
>NZ_CP010327.1|WP_039328445.1|1728207_1728495_-|hypothetical-protein
MSKQEIMYSHVEDWKASGLTQSKYCESAGINLATFSYWVVKYKNKTVEDGASNFIAIGKTSKTEGTEYEIVYPNGVKLRVKTKDLSDLYSLVNLV
>NZ_CP010327.1|WP_039330381.1|1727869_1728154_-|IS66-family-insertion-sequence-element-accessory-protein-TnpB
MRKSFDSLCGLVQNELNQVAHNGSVYVFINRRCNQMKLLHWETGRFVLYHKRLEQGTFAFPSHNKSQISWSDLVLMIEGIQVIKSSQKRRFSMK
>NZ_CP010327.1|WP_039328444.1|1726302_1727820_-|IS66-family-transposase
MEIDLENLSKQELLTLIKQQSKTISKQEQENIKLEEKATKYEYLFKQLQRMKFGQSRERFEDPNQTQLPLDVEPEVMQEQEEVIKQEITYSRQKKKHPGRAKLPDHLPVEEIEIYPEGDFSDKICIGKETTDVLDYVPGYFKIKRYIRYKYATKDKDNTQISIALLPERIIDKGIPSEGLLSTILVDKYVDHLPLHRQKQRFSRENIDIASSTIDGWAAQCMDALKPLYEKLVMDIKNEGYLQVDETTIKVLDEKKKDKSHLGYYWVYHAPISKLVMFNYSPTRASSAALPILENFKGYLQTDGYAGYKAYGNKSGVTHLGCWAHARREFERALDNDKTRAQHVLVEIQKLYAVERQVKEQNLTPDQIKELRLKESLPIINELGKYMFTQMKLTLPKSQIGKAFAYSQTRWDNLSAYLYNGNLQIDNNLVENAIRPVALGRKNYLFAGSHDAAQRAAMAYTFFANCKKHDVNPYQWLKYVLENIQSINHKNITDLYPHNYKDLIG
>NZ_CP010327.1|WP_006257457.1|1724447_1725038_+|cytochrome-b/b6-domain-containing-protein
MRMRGECYSLAFRVLHWSIAFVMLGMLITILLRYTWLNKEGMSEIIMEYCTSQEVNMTKEKAIVLAKRLRALMWEWHVYLGYTLMGLVFVRIILGMMGRVPFLNPFKRGIILNTRIRAVIYLVFYVCVVISIVSGVVLALDIETAYNNEIKSIHFGSIYYFVTYLVIHFIGVLFAELSSDNGIVSRMINGKSKYDL
>NZ_CP010327.1|WP_006257458.1|1723389_1724118_-|hypothetical-protein
MKKILLLFVILMSISTSYGQRKSKKQEEPVKKIEYLDIVQILSNKDELKLTQKQVGALTIKNEYIKRDLQNLNSKTKMQEVEKNMHQRQLFAGYDNFVNRTLNEDQLESWNVIKKEIAASEEESTDLKTEMAALDSAYKAELKEVYRKYSKDRKLYYASRNVVRKQYDADKLRIYKKYNQAVEEEGEEGDKVLTLEEIANLYKEYDDYYNEPTQANPLEYLDVKEEYSNETEEITSEEEGEY
>NZ_CP010327.1|WP_006257459.1|1722877_1723252_-|DUF983-domain-containing-protein
MSYISKVISGKCPNCGKEHIFHDKGNPITFKMPKMTKECGSCGYNFHRETGFYFGAMYMSYALTVAEMVTVMVLRLIINHLFDLNITMLHAFIAIVFVIFILWTFNYRLSRIMWLNLFYKKDEQ
>NZ_CP010327.1|WP_006257460.1|1721813_1722689_+|helix-turn-helix-domain-containing-protein
MKDITILQMRDLTEEVKGADFYANTIPQHLITNHNHVEKPHRHDFYVCMIFTKGFGTHEIDFQSYEIQPGMVFMLAPGQTHSWILSGDIDGYIFFHTQEYFDLFFVRETIREYPVFRSAYYPNGFLLNEESSVLVENLMKRMTDEVSQPNWKKNFSLVNLASLFYIECNRQLLEGNSFSAVPNLQYNQHLHHFENLLEKNFRTEKSAAVYAEWMNMTQKHLNRVCKTLLDKTTTDIIIDRIVLEAKRMLIYTGKSFSEIAMMLGYDDYSYFSKVFKKRTGISPKEFLKKYV
>NZ_CP010327.1|WP_006257461.1|1721273_1721567_-|hypothetical-protein
MKYILPILMVLGLASCGGGETKKTDLETIDKQSAREVTIKSVVAGDSILHITSQKIWANGQLVTQKTDTIKTAKEVSAWGDTKPTSLVKVPIYVTVE
>NZ_CP010327.1|WP_039328801.1|1732890_1733361_-|JAB-domain-containing-protein
METTVLNKDWLIASEVELIYKSKVKASKRPQITSSYSAYQIALKAWDGNKIELLEQFKVLMLSNNNKVLGVLEASTGGITATIVDLRIIFSALLKANATAFIIIHNHPSGKLDPSDADRQITRKIKEASKILDITLLDHLIITEESYYSFADEGTL
>NZ_CP010327.1|WP_039328803.1|1733545_1734058_-|hypothetical-protein
MAKKQPTLTELTELLFQQVVHLQEKLKQNITLQTQLSNRINNIEVKVNVSELHKIESNNRQRLQDDFTAFQSTLYDTKEDLLKIYRAISHKKMFYIIALNIFLLLTSGLSIYVAIKKSIHYSDYNQLIENNKKSNLELMYLNQFFKENPKNFEVYKKWKISSENNTKKPL
>NZ_CP010327.1|WP_039328804.1|1734060_1734987_-|relaxase/mobilization-nuclease-domain-containing-protein
MIAKAKTCIGGAALFNYVINPNKGYELARNNLSGETPKDMYQTMQILQNQNTRCKNNTISVVISPTIEDSRKMTDQDLENLVKDFLVGLKLNPKDAQYIAYLHTEKEHKHIHILINRIDENGKALKDNYIGFQAQSIAHEIALKYNWTSIRQENINRKELLKTNQKQTAEIIKKAHYFVLKERPKNLDQYINMMLAHQIEVKPTVNKQGNIQGYRFIHLPTNTNLKASEVDRNLKLNELFENNIPKPNNDLFHTVLYKDQDKQICFENWNTNTVSLFSFLNAYGNYYEDYMPDITKKKKRKQTQTLNL
>NZ_CP010327.1|WP_006257449.1|1734988_1735288_-|hypothetical-protein
MKREHKIEFRVTLTESLLIKNKAKKIGCSVSEYLRSTALGYSVSYKLTQDEIETYKLLNKFADNFRRIGNLFKLGDTTKVKESTIETANLIRAHLEKLK
>NZ_CP010327.1|WP_039328805.1|1735386_1736295_-|hypothetical-protein
MNTQEAKNISIISILDSLGIKPTKINDKQAWYHSPFRAENTPSFSVSVTKNVFYDFGDSTYKGNVIDFVMLYYKCDIKEALKILANNSFSVHQQLFNPQVNQDEKDYEITAIKPLRNKYLIYYIKQRGLCIKTTQRYCKEIHYILKDKAYYAIGFQNELDGVELRNKYVQMCFGSKYPTYINNDSSTVFLFEAFIDFLSFITLKPNLEHRFDYIILNSVNTLESTLIQSSNKFLYKTLDDSETFESKYKTIVACFDNDTAGDKATEKLIAAFPLITKDARAKYKDYKDVNDYLLSINRDKLT
>NZ_CP010327.1|WP_006260545.1|1736489_1737731_-|hypothetical-protein
MNTTATEYIRIGTEYYAIRKKNVNGKEIIVERKLWRKSEIITDFGKDIIKELPKFFGYKCEPNHIHYTHFIGDYFNSYSPILYNIDTTSELSLNSLKEQIPITYYFLQHIFGNQYLLAIDYFKILLFYPEQILPIIVLVSRNRETGKTTFLNWIKEIFDKNAVFVKANAFTEKFNSEMDSKLLLLIEEVKSENKDIVEAIKYISTAMYQSIEYKGQEKVEQKSFLKIIMTSNHEHNFLKIDKEETRFWVIKVPPIRKRSTEFFTKLIQEIPIFLNYLYRVPFTTEKKTRMWFTPETLHTEALHKLKHDVDLQNKNLVLDILDIIFNEFDMDQIDTTPSDINALLNYYNRGHNITMREIQTILENIALVRSTNSNNYERVKIEDSTLKRTIHKGKYYRISKETLLNQMTDEINN
>NZ_CP010327.1|WP_006260546.1|1737829_1738117_-|helix-turn-helix-domain-containing-protein
MTTLKIIQELNEIKLMITKGNQFQKEIFTIKDLMAYTGFSDSTIHKLTSKNLIPHHKPTNGTLFFDRLEIVEWIKQYRVFTDQEVLSQFSKQLKK
>NZ_CP010327.1|WP_039328812.1|1738208_1739033_-|hypothetical-protein
MNTIIETPFFFFHQKLEKLKSVTLSKKFTYIIAALLPIISLVTSTFQLPYFYSISKWYILLPLTALICSILLLSAAINFHKGQNIFLISHLSLIYKESFKSFKNSKEYLLISPSKKTITINITTPSKKKQEQKKDNVFVFSTAHQAIIKETLYELKKEVINDDTTMEDFKRVIESCISKKTDNPDSSIKLELQSQHCAMFLEAFFIPFVHLFTLHKTTLKESCRYFKYATVEDYSAINYDSINKKGRKLITNAHKETYAKILENVKSQLSKKLS
>NZ_CP010327.1|WP_006257444.1|1739463_1739865_-|methylmalonyl-CoA-epimerase
MRKIEHIGIAVKDLEASNALFEKLFGAPAYKEEAVESEGVKTSFFMNGPNKIELLEATNPDSPIAKFLEKKGEGIHHIAFDVEDIEAEMKRLAAEGFTLLNEIPKKGADNKLVAFLHPKTTNGVLIELCQEIK
>NZ_CP010327.1|WP_006257441.1|1739935_1740328_+|30S-ribosome-binding-factor-RbfA
METNRQKKMGALLQKDIVDILQGEVRKNGITNLVISVSKVNITSDLSVARVYLSIFPIDKGEELLKGIKSNAPLIKHELAQRVKHQMRKVPDLLFYVDDSLEYIDQIDKALTGDENPIANPDLLEKRKKK

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Crispr_ID: NZ_CP010327_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010327_3

1739219-1739366

Orphan

Consensus_repeat	Method
GTGGTCCCACCTGGGCTCGAACCAGGGACTTACTGATTATGAGTCAG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010327_3

>merge|NZ_CP010327|3|1739219-1739366|CRISPRCasFinder
GTGGTCCCACCTGGGCTCGAACCAGGGACTTACTGATTATGAGTCAGTTACTCTAACCAGCTGAGTTATAGGACCGCTCATTTTGAGCGAAAAATTTCGTGGTGGTCCCACCTGGGCTCGAACCAGGGACTTGCTGATTATGAGTCAG

>NZ_CP010327|3|2|1739219-1739366|CRISPRCasFinder
GTGGTCCCACCTGGGCTCGAACCAGGGACTTACTGATTATGAGTCAG	TTACTCTAACCAGCTGAGTTATAGGACCGCTCATTTTGAGCGAAAAATTTCGTG
GTGGTCCCACCTGGGCTCGAACCAGGGACTTGCTGATTATGAGTCAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010327.1\|WP_006257439.1\|1741957_1744468_+\|sel1-repeat-family-protein	unknown	unknown	gnl\|CDD\|276807
NZ_CP010327.1\|WP_039328812.1\|1738208_1739033_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257449.1\|1734988_1735288_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|184361
NZ_CP010327.1\|WP_006257441.1\|1739935_1740328_+\|30S-ribosome-binding-factor-RbfA	unknown	unknown	gnl\|CDD\|376719
NZ_CP010327.1\|WP_039328805.1\|1735386_1736295_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|379044
NZ_CP010327.1\|WP_036496800.1\|1729594_1730821_+\|site-specific-integrase	unknown	unknown	gnl\|CDD\|271185
NZ_CP010327.1\|WP_039328803.1\|1733545_1734058_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_039328801.1\|1732890_1733361_-\|JAB-domain-containing-protein	unknown	unknown	gnl\|CDD\|163702
NZ_CP010327.1\|WP_039328804.1\|1734060_1734987_-\|relaxase/mobilization-nuclease-domain-containing-protein	unknown	unknown	gnl\|CDD\|367497
NZ_CP010327.1\|WP_006260546.1\|1737829_1738117_-\|helix-turn-helix-domain-containing-protein	unknown	unknown	gnl\|CDD\|378935
NZ_CP010327.1\|WP_006257437.1\|1746248_1747325_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257436.1\|1747327_1748389_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257433.1\|1751181_1753551_-\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|379720
NZ_CP010327.1\|WP_006257435.1\|1748491_1749682_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257444.1\|1739463_1739865_-\|methylmalonyl-CoA-epimerase	unknown	unknown	gnl\|CDD\|319912
NZ_CP010327.1\|WP_006260545.1\|1736489_1737731_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273716
NZ_CP010327.1\|WP_006257440.1\|1740329_1741535_+\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|226957
NZ_CP010327.1\|WP_006257434.1\|1750083_1751082_+\|2-hydroxyacid-dehydrogenase	unknown	unknown	gnl\|CDD\|240659
NZ_CP010327.1\|WP_006257438.1\|1744467_1746246_+\|HSP90-family-protein	unknown	unknown	gnl\|CDD\|237603
NZ_CP010327.1\|WP_039328800.1\|1731016_1732132_+\|Fic-family-protein	unknown	unknown	gnl\|CDD\|225718

Protein	Function_ID	Function_description	E-value
NZ_CP010327.1\|WP_006257439.1\|1741957_1744468_+\|sel1-repeat-family-protein	gnl\|CDD\|276807	sd00010, SLR, Sel1-like repeat. Sel1-like repeats (SLRs) share similar alpha-helical conformations with Tetratricopeptide repeats (TPRs), but with different consensus sequence lengths and superhelical topologies. SLRs contain 36 to 44 amino acids and are present in bacteria and eukaryotes but not in archaea. SLR proteins are involved in a variety of functions, and many serve as adaptor proteins for the assembly of macromolecular complexes. The SLR family was named after the Caenorhabditis elegans Sel1 protein which is predicted to fold into 11 SLRs, a transmembrane domain, and an N-terminal signal sequence. The human Sel1L protein contains an additional fibronectin type-II domain and an N-terminal PEST sequence. Its downregulation is associated with the development of breast and pancreatic carcinomas.	1.58515e-28
NZ_CP010327.1\|WP_006257449.1\|1734988_1735288_-\|hypothetical-protein	gnl\|CDD\|184361	PRK13877, PRK13877, conjugal transfer transcriptional regulator TraJ.	0.000125586
NZ_CP010327.1\|WP_006257441.1\|1739935_1740328_+\|30S-ribosome-binding-factor-RbfA	gnl\|CDD\|376719	pfam02033, RBFA, Ribosome-binding factor A.	3.51365e-31
NZ_CP010327.1\|WP_039328805.1\|1735386_1736295_-\|hypothetical-protein	gnl\|CDD\|379044	pfam13155, Toprim_2, Toprim-like. This is a family or Toprim-like proteins.	2.26785e-15
NZ_CP010327.1\|WP_036496800.1\|1729594_1730821_+\|site-specific-integrase	gnl\|CDD\|271185	cd01185, INTN1_C_like, Integrase IntN1 of Bacteroides mobilizable transposon NBU1 and similar proteins, C-terminal catalytic domain. IntN1 is a tyrosine recombinase for the integration and excision of Bacteroides mobilizable transposon NBU1 from the host chromosome. IntN1 does not require strict homology between the recombining sites seen with other tyrosine recombinases. This family belongs to the superfamily of DNA breaking-rejoining enzymes, which share the same fold in their catalytic domain and the overall reaction mechanism. The catalytic domain contains six conserved active site residues. Their overall reaction mechanism involves cleavage of a single strand of a DNA duplex by nucleophilic attack of a conserved tyrosine to give a 3' phosphotyrosyl protein-DNA adduct. In the second rejoining step, a terminal 5' hydroxyl attacks the covalent adduct to release the enzyme and generate duplex DNA.	4.77224e-33
NZ_CP010327.1\|WP_039328801.1\|1732890_1733361_-\|JAB-domain-containing-protein	gnl\|CDD\|163702	cd08071, MPN_DUF2466, Mov34/MPN/PAD-1 family. Mov34 DUF2466 (also known as DNA repair protein RadC) domain of unknown function contains the signature JAB1/MPN/Mov34 metalloenzyme (JAMM) motif, EXnHS/THX7SXXD, which is involved in zinc ion coordination and provides the active site for isopeptidase activity. However, to date, the name RadC has been misleading and no function has been determined.	1.21465e-46
NZ_CP010327.1\|WP_039328804.1\|1734060_1734987_-\|relaxase/mobilization-nuclease-domain-containing-protein	gnl\|CDD\|367497	pfam03432, Relaxase, Relaxase/Mobilisation nuclease domain. Relaxases/mobilisation proteins are required for the horizontal transfer of genetic information contained on plasmids that occurs during bacterial conjugation. The relaxase, in conjunction with several auxiliary proteins, forms the relaxation complex or relaxosome. Relaxases nick duplex DNA in a specific manner by catalyzing trans-esterification.	5.14244e-13
NZ_CP010327.1\|WP_006260546.1\|1737829_1738117_-\|helix-turn-helix-domain-containing-protein	gnl\|CDD\|378935	pfam12728, HTH_17, Helix-turn-helix domain. This domain is a DNA-binding helix-turn-helix domain.	1.84193e-06
NZ_CP010327.1\|WP_006257433.1\|1751181_1753551_-\|TonB-dependent-receptor	gnl\|CDD\|379720	pfam14905, OMP_b-brl_3, Outer membrane protein beta-barrel family. This family includes proteins annotated as TonB dependent receptors. But it is also likely to contain other membrane beta barrel proteins of other functions.	8.21956e-78
NZ_CP010327.1\|WP_006257444.1\|1739463_1739865_-\|methylmalonyl-CoA-epimerase	gnl\|CDD\|319912	cd07249, MMCE, Methylmalonyl-CoA epimerase (MMCE). MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.	4.01437e-55
NZ_CP010327.1\|WP_006260545.1\|1736489_1737731_-\|hypothetical-protein	gnl\|CDD\|273716	TIGR01613, putative_primase, phage/plasmid primase, P4 family, C-terminal domain. This model represents a clade within a larger family of proteins from viruses of bacteria and animals. Members of this family are found in phage and plasmids of bacteria and archaea only. The model describes a domain of about 300 residues, found generally toward the protein C-terminus. [DNA metabolism, DNA replication, recombination, and repair, Mobile and extrachromosomal element functions, Prophage functions].	0.00192142
NZ_CP010327.1\|WP_006257440.1\|1740329_1741535_+\|ABC-transporter-permease	gnl\|CDD\|226957	COG4591, LolE, ABC-type transport system, involved in lipoprotein release, permease component [Cell envelope biogenesis, outer membrane].	1.29143e-38
NZ_CP010327.1\|WP_006257434.1\|1750083_1751082_+\|2-hydroxyacid-dehydrogenase	gnl\|CDD\|240659	cd12183, LDH_like_2, D-Lactate and related Dehydrogenases, NAD-binding and catalytic domains. D-Lactate dehydrogenase (LDH) catalyzes the interconversion of pyruvate and lactate, and is a member of the 2-hydroxyacid dehydrogenase family. LDH is homologous to D-2-hydroxyisocaproic acid dehydrogenase (D-HicDH) and shares the 2-domain structure of formate dehydrogenase. D-2-hydroxyisocaproate dehydrogenase-like (HicDH) proteins are NAD-dependent members of the hydroxycarboxylate dehydrogenase family, and share the Rossmann fold typical of many NAD binding proteins. HicDH from Lactobacillus casei forms a monomer and catalyzes the reaction R-CO-COO(-) + NADH + H+ to R-COH-COO(-) + NAD+. D-HicDH, like the structurally distinct L-HicDH, exhibits low side-chain R specificity, accepting a wide range of 2-oxocarboxylic acid side chains. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain.	0
NZ_CP010327.1\|WP_006257438.1\|1744467_1746246_+\|HSP90-family-protein	gnl\|CDD\|237603	PRK14083, PRK14083, HSP90 family protein; Provisional.	0
NZ_CP010327.1\|WP_039328800.1\|1731016_1732132_+\|Fic-family-protein	gnl\|CDD\|225718	COG3177, COG3177, Fic family protein [Function unknown].	1.00594e-35

>NZ_CP010327.1|WP_039328812.1|1738208_1739033_-|hypothetical-protein
MNTIIETPFFFFHQKLEKLKSVTLSKKFTYIIAALLPIISLVTSTFQLPYFYSISKWYILLPLTALICSILLLSAAINFHKGQNIFLISHLSLIYKESFKSFKNSKEYLLISPSKKTITINITTPSKKKQEQKKDNVFVFSTAHQAIIKETLYELKKEVINDDTTMEDFKRVIESCISKKTDNPDSSIKLELQSQHCAMFLEAFFIPFVHLFTLHKTTLKESCRYFKYATVEDYSAINYDSINKKGRKLITNAHKETYAKILENVKSQLSKKLS
>NZ_CP010327.1|WP_006260546.1|1737829_1738117_-|helix-turn-helix-domain-containing-protein
MTTLKIIQELNEIKLMITKGNQFQKEIFTIKDLMAYTGFSDSTIHKLTSKNLIPHHKPTNGTLFFDRLEIVEWIKQYRVFTDQEVLSQFSKQLKK
>NZ_CP010327.1|WP_006260545.1|1736489_1737731_-|hypothetical-protein
MNTTATEYIRIGTEYYAIRKKNVNGKEIIVERKLWRKSEIITDFGKDIIKELPKFFGYKCEPNHIHYTHFIGDYFNSYSPILYNIDTTSELSLNSLKEQIPITYYFLQHIFGNQYLLAIDYFKILLFYPEQILPIIVLVSRNRETGKTTFLNWIKEIFDKNAVFVKANAFTEKFNSEMDSKLLLLIEEVKSENKDIVEAIKYISTAMYQSIEYKGQEKVEQKSFLKIIMTSNHEHNFLKIDKEETRFWVIKVPPIRKRSTEFFTKLIQEIPIFLNYLYRVPFTTEKKTRMWFTPETLHTEALHKLKHDVDLQNKNLVLDILDIIFNEFDMDQIDTTPSDINALLNYYNRGHNITMREIQTILENIALVRSTNSNNYERVKIEDSTLKRTIHKGKYYRISKETLLNQMTDEINN
>NZ_CP010327.1|WP_039328805.1|1735386_1736295_-|hypothetical-protein
MNTQEAKNISIISILDSLGIKPTKINDKQAWYHSPFRAENTPSFSVSVTKNVFYDFGDSTYKGNVIDFVMLYYKCDIKEALKILANNSFSVHQQLFNPQVNQDEKDYEITAIKPLRNKYLIYYIKQRGLCIKTTQRYCKEIHYILKDKAYYAIGFQNELDGVELRNKYVQMCFGSKYPTYINNDSSTVFLFEAFIDFLSFITLKPNLEHRFDYIILNSVNTLESTLIQSSNKFLYKTLDDSETFESKYKTIVACFDNDTAGDKATEKLIAAFPLITKDARAKYKDYKDVNDYLLSINRDKLT
>NZ_CP010327.1|WP_006257449.1|1734988_1735288_-|hypothetical-protein
MKREHKIEFRVTLTESLLIKNKAKKIGCSVSEYLRSTALGYSVSYKLTQDEIETYKLLNKFADNFRRIGNLFKLGDTTKVKESTIETANLIRAHLEKLK
>NZ_CP010327.1|WP_039328804.1|1734060_1734987_-|relaxase/mobilization-nuclease-domain-containing-protein
MIAKAKTCIGGAALFNYVINPNKGYELARNNLSGETPKDMYQTMQILQNQNTRCKNNTISVVISPTIEDSRKMTDQDLENLVKDFLVGLKLNPKDAQYIAYLHTEKEHKHIHILINRIDENGKALKDNYIGFQAQSIAHEIALKYNWTSIRQENINRKELLKTNQKQTAEIIKKAHYFVLKERPKNLDQYINMMLAHQIEVKPTVNKQGNIQGYRFIHLPTNTNLKASEVDRNLKLNELFENNIPKPNNDLFHTVLYKDQDKQICFENWNTNTVSLFSFLNAYGNYYEDYMPDITKKKKRKQTQTLNL
>NZ_CP010327.1|WP_039328803.1|1733545_1734058_-|hypothetical-protein
MAKKQPTLTELTELLFQQVVHLQEKLKQNITLQTQLSNRINNIEVKVNVSELHKIESNNRQRLQDDFTAFQSTLYDTKEDLLKIYRAISHKKMFYIIALNIFLLLTSGLSIYVAIKKSIHYSDYNQLIENNKKSNLELMYLNQFFKENPKNFEVYKKWKISSENNTKKPL
>NZ_CP010327.1|WP_039328801.1|1732890_1733361_-|JAB-domain-containing-protein
METTVLNKDWLIASEVELIYKSKVKASKRPQITSSYSAYQIALKAWDGNKIELLEQFKVLMLSNNNKVLGVLEASTGGITATIVDLRIIFSALLKANATAFIIIHNHPSGKLDPSDADRQITRKIKEASKILDITLLDHLIITEESYYSFADEGTL
>NZ_CP010327.1|WP_039328800.1|1731016_1732132_+|Fic-family-protein
MDYNLEKAVDYHYGVFPPKSIDYTLFIQELVRATDALARFDQMLKNLHNTEILLAPLRNQEAVISSRIEGTISTMDEILQYEADHEGEDITTAKTDVIETILYQRALKNAQSALESGYDFSLSFLKQMHQQLLYLGRGANKSPGEFKKEQNYLADRLKREIQFIPIRPENLVDGLEQLFKFLENSDFPPLIKTAIMHLEFEALHPFKDGNGRIGRMLITLNLWREKILSEPHFYISGYFEENKDEYIEQMRNVSKTKDWNEWILFFLKAVENQAIKNLEIAESIKSLYETTKTEFSELLSSKWNIEILDFIFTYPVFRNNKFVSTTKIPNATAVLMIKKLVDNGYLVLREESSGRRAAMYSFEPLMKLVRV
>NZ_CP010327.1|WP_036496800.1|1729594_1730821_+|site-specific-integrase
MKTSLKIVLKKTKLSDGTYPINLRVTINRRSKFYKTPYSTAPKFWNAKVGEFTSKFPNFLQANRILSTLKQDASKVLDLMIEQEKEFTLEVFDSLLRPEKVEIVKFVAFFQNRIEQFKEAGQVSSASSYNDSLKALKRFKPGVIKYEFSQIDYSFLVAFEADLRSRGCTNGGIGIYMRNIRAIYNSAIKSKIASLENYPFRDYVISKLKSTKIKKALTKEELQLLLDYDFSENTEGAKVLYTYLFSFFCRGMNFTDIAELKWDDINSNRFSYIRNKTGVAINVKIPENKDLDTILNYFRIYRPFDTDYIFSILDKDLSLYTKEELRARKSSVRDYYNKQLNIIAKECGIKTKITFYTARHTFATLSLKKGVNLYMLKQAFGHQSIKTTEAYVEDFNREELDQAFENLF
>NZ_CP010327.1|WP_006257444.1|1739463_1739865_-|methylmalonyl-CoA-epimerase
MRKIEHIGIAVKDLEASNALFEKLFGAPAYKEEAVESEGVKTSFFMNGPNKIELLEATNPDSPIAKFLEKKGEGIHHIAFDVEDIEAEMKRLAAEGFTLLNEIPKKGADNKLVAFLHPKTTNGVLIELCQEIK
>NZ_CP010327.1|WP_006257441.1|1739935_1740328_+|30S-ribosome-binding-factor-RbfA
METNRQKKMGALLQKDIVDILQGEVRKNGITNLVISVSKVNITSDLSVARVYLSIFPIDKGEELLKGIKSNAPLIKHELAQRVKHQMRKVPDLLFYVDDSLEYIDQIDKALTGDENPIANPDLLEKRKKK
>NZ_CP010327.1|WP_006257440.1|1740329_1741535_+|ABC-transporter-permease
MKFSLYIAKRYAFSKSKSKAINVITTISSVGIVVSAMAMFIVLSVFSGLKAYSLSFVDDLDPDLKVFTPKGKSFVVEDRQILDLEESGYFKGVAKVVEDRLLFSFKDKQAVSMIKGIDSDFVNVTDFDEKVEYGSWLEPDTDDAVVGVGMSHLLSMGLFDTENAFEALALKPGKGTIENPEDAFIKRHLNPTGVYVLGNDDLDNKYVFVDIDNARALLNIPTTEVTNLELAIAEGVSEGKAIQKIKEVLGEEYIVKNKTQLNDGLYRMLNMENLVVYLIFVLVVIMALFTLVGSMIMIILEKQPNIKTLNQIGVPVSDLRKIFLFQGLIICVLGSVIGLVLGGIVVSLQVAFGFISIREGLAYPVAFNWVNIFVVLVSIIVLGLLASLVSSSRVNNSYLKL
>NZ_CP010327.1|WP_006257439.1|1741957_1744468_+|sel1-repeat-family-protein
MEYLNYVREFANDSVSITAHAEEFLNKNDYSNPHEWYKAHAICMLAEQIGKNNEVLEKLYDQLNEDSNCLHSSMSLSDEDYADWFTDVKALNDIFIDRGYKHAYAYQYELFINSRYGFRDEERAVGYLKKGVELGDDLCKCYVGYAMYYGTQGYEKDEEGAVTILKTAVDGERANIANLFLLNIEFRGCTSGEEGKAVVEKFSELINVKKRGLYILADYYLREDDNVSAEAALKDGIANNSAYCKYLLGMMACNGRFEELGYTEEQGRELLADAYDYGITHAGYVLGYSYFYPRTEGLEAKQEAGIEMFKKAIAYYSSEATLELAIIYLYNEDFKDIAKGMEFLDRGVEYKYDRAMSEKGFVLLDFEEVERDVEGGKAMLEQAMAAGNDYAPYRLGLAYQNADFEEEADYEKALYLFELAAERNNLSGLELAGRYHRFGYAGEPNLEKAVSYYQRGIEYFNSNYCKVELAMLLERGEGIEQDVAEAARLYEDALNEGYTYAAIRLGFIYEEGSIGEPDYAKARAHFELAAEQDMAEGVYHLARCYRYGTGGEENQEKSFELFSKALELGFVDANVDIALFYEEGINGGEPDYEKAFEYMIVGAEAGFNYAQYKVGVYYSYGYLAETNVELGKEWFEKSVESGSPLGMLSLGDYYLYGYGEEKEYDKAFEYYIAAEERNYISEGLGICYQFGLGVEVDEVKAFHYYKLAADRQYDSAIFRLGLCYFYGNGTERDLVEAFHYLKQVADRGNMDAASYVGLMLVKGDGAEKDPEYGVSYLIQAAEAGFDMAQYELANCYLKGEGVPQSDDSAMEWYQQAAENGNEDAQKIVGGPRKRRR
>NZ_CP010327.1|WP_006257438.1|1744467_1746246_+|HSP90-family-protein
MENQKQFQFQVNMKGMIELLSEHIYSSPTVFVRELLQNGMDAVTVRKGIDESFKGKINITFEGDRLIFQDNGVGLTHDDVHQFLSVIGQSSKRGELADKDLIGKFGIGLLSCLVVSEAIVVESRSLYKDESVRWTGKADGTYEVEMIPLLDEVGTKVILDAKKAWRSLFKRDEVKQNVLFYGSALPIEVNLIEKGEVEQCLDGNPVWLDNESSKEQLLDYGKEVFKTKFLDVFRLYSEAGEIQGVAYIIPNKVNTTATKEHKIFLKKMYLCDQATNLLPEWTSFVRCIFNSNALQPTASRESLMNNAVLQESKKELSECFKDYLKTLSITNPEILEKIISIHHMFIKALAASDNEIMTMFEDYLPFETNQGMMAFGEIKETYKNIYYTPSLDDYRQIRRIAGSQNKLVINAAYSYETDLIEKLKRSHAELKLERIAPNDILEEFEDAIEDSQRIENFIDKANKILKRHFCRAEVKRFEPKDTTAIYIANEDALTSKNIQSLSQTSNPFASTLQHFKKKEEVMPTLCFNQQSELVEKVMLIDDDELFEALINVLYVQALMLGGYTINKREMDTFNDALYQFMILGMSNFLPKF
>NZ_CP010327.1|WP_006257437.1|1746248_1747325_+|hypothetical-protein
MYRLEIQKLLLAIDENLDDQELCLSFIRQGIQIADKHNDLDWGVELRYSLIHEERATSGCTESVLAFAWILDVCDRYPERFHESEFLLEYEWMLCSAYSNASLSTEQILAVADDLYTRLERNHISKRGYYFTMAEYVQNIGDYAKGEEYIKLAMQEPYDDENIEIMEYDYRIENLVLMGRFDEAIVLMEQVELKKLSDFALPFETYCAMAYCMAKVEDVRASIYLEKAKASFETLREVNSSMLYSMTRLMYAMYLLKDSVMWSTFERIADWEIDAEDDLQFMLSRHAALICAQGGVIALDLSPRLSYYEPNGKYDLTQLYEYYDNIATRLGLQFDSRNGSDFCSKEYKELKMMNGIKV
>NZ_CP010327.1|WP_006257436.1|1747327_1748389_+|hypothetical-protein
MNYNLEIQKILLKVEELPSFSDKVKALKEAIALADKHNDLDWGFDLRLTLIQKERNTSKCEESFPAFAWILNASDSNEDYFDESEFLWEYKWMFCSAYRNASISLEQIKEIGDDLRRRLTKNGYSDRAYYNVMTGYALHLRDYKLAQEYIRLADEEILDDMANCPACELDTKVETLLDLGHIDESLVKAQDLINKKLTCYSMPFQTFCSFANKLYDAGDDRASIYFDKALEEYHAHDQYDSSVGYSMGELVSYMAKTKHPEMWSFFSRICEWQLGAEDIHIYNFAKAMAPLMKGEGEVTLSLSPLLPYYQESGVYKLSDLYTYFKDTAYDYANRFDQRNHNTNFIQEVDKALN
>NZ_CP010327.1|WP_006257435.1|1748491_1749682_-|hypothetical-protein
MIAKIQLKLNNDVLLTVIKMVKHTDDYIVENVTDALLISIKEDLINKLEDKAKTIQKQVSILDHNKKHSLVLKYHEAYSMYKLLEAVHEKELFNDNLHIKKIKRLISELHNKLDIFAKEEDITIIDEDLVEDNPIEVTETKPERILVLEGVEDAHTVDPNQVEIPILFDMTDAFSDHEEEINMPNEELSHEVISTMPNTLEELFTPSVEEEIIPDNELPLDHNSYLEKEMDVTEETIGSTEESNTTSETFPTQETIYSTEEDLFMTSIPESQPKLDWERITTEDPSPSSEKKNTAEQVTFSDPKYNELFNIAKTGINVDEQDLINHEPIISSQPEQEMNTLLTEEEDIPYSQDVMQIEIFDVEMIEVEPSERKEKKEKKKEKKIVKAEQDGQISLF
>NZ_CP010327.1|WP_006257434.1|1750083_1751082_+|2-hydroxyacid-dehydrogenase
MKIAFFSTQPYDVTFFDKENKQFGFELEYFETGLDEQTVNVITEGTDVVCVFVNDKVDAEVISNLAKKNVKYIALRCAGFNNVDLDAAHQHNIRVCRVPAYSPEAVAEHTLAMLFTINRKIHKAYNRVREQNFSLNGLLGTNIYKKTVGIIGTGNIGAVFCRMMKALGTEVLAYDIYKNEQLEAEGIRYVELEELFTKSDIISLHCPLTPDTMHLINEDTISKMKDGVMLINTSRGKLIDTHAIIQGLRAKKIGALGIDVYEQEEKVFFRDLSGTILEDERLQLLTSFPNVLVTAHQAFFTDEALTQIAFITLDNLKQLKTNNEIVGRNAEL
>NZ_CP010327.1|WP_006257433.1|1751181_1753551_-|TonB-dependent-receptor
MKNLFTLLLTILCSQFILAQSSIKGTVVDQSDKPVDYAEIQLFRPNDTFVKQSFSDETGLFSMEDIAKGDYVLKIFHLGQLVSEQQLAVQSDVDLKNISVKNEQQLDEIVLHAEKRLVERKVDRLVYNTANSIASQGMDALEALATTPMVKVQNDKISISGKNNVRIMVDDRMLELQGDALTNYLRTLRSDDIEKIEVITTPSAKYEASGNAGIINIILKKNKRMGVYGTVSSNYSYNNYNSGGGNGSLNYQNKKWSVMLKGNINNSNNSNTNDNTYQDDKRYLGNNSLNESSYKNRGASITTNYQLTDNAVIGGSYNYTKFSGDPRAFTTSTYKSYPFTATDSIINSVNRSYTKNNYHTANLFFDQKLDTLGSKIAIGANYFSNSPDQSFDIKEFDNSSVLRRYNTYTNTLKYSVYSLNADLTYHLPWAEVEFGAKYTTYDNKAQVTYFNIKNGNATLDPLKSNRFNYTEDNYAAYLSFTKQLTEKWSVKGGMRYEQTEAKGHQLDNNEKFTKSYGKWFPTAYVSFTPNETHSFSFNYSKRINRPYSNVLNPFKYYSNSYTYHQGNPELNPSYTNNYELSYVYNGALSVNLNYYHMTDQFDYMNKYVDGVFMSSTYNMLNSDNYGVDISYNNAITAWWETNSGLEYIMSSPYYRNEAATQVGLKGNLFDYYSQNTFSVNNAKTLKLLLNWYHQIPHKEDNTRYSSYSSLSFGAKLALLDKKLNINMTMQDIFNTGKSNGTSYYKDNVQSFKNSWNSRRFSISASYTFGNSKNKKAIQEANFEDKNRSN

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Crispr_ID: NZ_CP010327_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010327_4

1895227-1895431

Orphan

Consensus_repeat	Method
TTTTTCTTACAGGTGGCTTAATAGGTGGAACGCCCCAATCATCTTTTTC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010327_4

>merge|NZ_CP010327|4|1895227-1895431|CRISPRCasFinder
ATTTTCTTACAGGTGGTTTAATAGGTGGAACGCCCCAATCATCTTTTTCTATTTCTTGGTCGTTTATATTATTCATTGTTTTTCTTACAGGTGGCTTAATAGGTGGAACGCCCCAATCATCTTTTTCTATTTCTTGGTCGTTTATATTATTCATTATTTTTCTTACAGGTGGTTTAATAGGTGGAACGCCCCAATCATCTTTTTC

>NZ_CP010327|4|3|1895227-1895431|CRISPRCasFinder
ATTTTCTTACAGGTGGTTTAATAGGTGGAACGCCCCAATCATCTTTTTC	TATTTCTTGGTCGTTTATATTATTCATTGTTTTTCTTACAGGTGGCTTAATAGGTGGAACGCCCCAATCATCTTTTTCTATTTCTTGGTCGTTTATATTATTCATTA
TTTTTCTTACAGGTGGTTTAATAGGTGGAACGCCCCAATCATCTTTTTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010327.1\|WP_006257316.1\|1888628_1889951_+\|trigger-factor	unknown	unknown	gnl\|CDD\|272913
NZ_CP010327.1\|WP_039328844.1\|1905548_1912430_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274730
NZ_CP010327.1\|WP_006257301.1\|1900563_1902159_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|129794
NZ_CP010327.1\|WP_006260559.1\|1891981_1892320_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257319.1\|1885241_1886495_+\|transporter	unknown	unknown	gnl\|CDD\|367457
NZ_CP010327.1\|WP_006257320.1\|1884140_1884920_+\|glutamate-racemase	unknown	unknown	gnl\|CDD\|234851
NZ_CP010327.1\|WP_006257307.1\|1897244_1898033_-\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP010327.1\|WP_006257318.1\|1886513_1888142_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257311.1\|1892467_1893139_-\|response-regulator-transcription-factor	unknown	unknown	gnl\|CDD\|225107
NZ_CP010327.1\|WP_039328842.1\|1904313_1905546_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|376421
NZ_CP010327.1\|WP_006257310.1\|1893131_1894877_-\|tetratricopeptide-repeat-containing-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|226951
NZ_CP010327.1\|WP_006257308.1\|1895821_1896754_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_039328840.1\|1902878_1904309_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257315.1\|1890044_1890704_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	unknown	unknown	gnl\|CDD\|184722
NZ_CP010327.1\|WP_006257304.1\|1899500_1900574_+\|HlyD-family-secretion-protein	unknown	unknown	gnl\|CDD\|224482
NZ_CP010327.1\|WP_006257306.1\|1898163_1899501_+\|TolC-family-protein	unknown	unknown	gnl\|CDD\|224455
NZ_CP010327.1\|WP_006257317.1\|1888174_1888531_+\|phage-holin-family-protein	unknown	unknown	gnl\|CDD\|377198
NZ_CP010327.1\|WP_039328846.1\|1912434_1913349_+\|pentapeptide-repeat-containing-protein	unknown	unknown	gnl\|CDD\|224276
NZ_CP010327.1\|WP_039328848.1\|1913620_1913980_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006257314.1\|1890707_1891949_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	unknown	unknown	gnl\|CDD\|235422

Protein	Function_ID	Function_description	E-value
NZ_CP010327.1\|WP_006257316.1\|1888628_1889951_+\|trigger-factor	gnl\|CDD\|272913	TIGR00115, tig, trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome. [Protein fate, Protein folding and stabilization].	7.61981e-42
NZ_CP010327.1\|WP_039328844.1\|1905548_1912430_+\|hypothetical-protein	gnl\|CDD\|274730	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain. This model represents a conserved unique core sequence shared by large numbers of proteins. It is occasional in the Archaea Methanosarcina barkeri) but common in bacteria and eukaryotes. Most fall into two large classes. One class consists of long proteins in which two classes of repeats are abundant: an FG-GAP repeat (pfam01839) class, and an RHS repeat (pfam05593) or YD repeat (TIGR01643). This class includes secreted bacterial insecticidal toxins and intercellular signalling proteins such as the teneurins in animals. The other class consists of uncharacterized proteins shorter than 400 amino acids, where this core domain of about 75 amino acids tends to occur in the N-terminal half. Over twenty such proteins are found in Pseudomonas putida alone; little sequence similarity or repeat structure is found among these proteins outside the region modeled by this domain.	2.82871e-14
NZ_CP010327.1\|WP_006257301.1\|1900563_1902159_+\|hypothetical-protein	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	1.99965e-11
NZ_CP010327.1\|WP_039328842.1\|1904313_1905546_+\|hypothetical-protein	gnl\|CDD\|376421	pfam00932, LTD, Lamin Tail Domain. The lamin-tail domain (LTD), which has an immunoglobulin (Ig) fold, is found in Nuclear Lamins, Chlo1887 from Chloroflexus, and several bacterial proteins where it occurs with membrane associated hydrolases of the metallo-beta-lactamase,synaptojanin, and calcineurin-like phosphoesterase superfamilies.	4.89534e-07
NZ_CP010327.1\|WP_006257319.1\|1885241_1886495_+\|transporter	gnl\|CDD\|367457	pfam03349, Toluene_X, Outer membrane protein transport protein (OMPP1/FadL/TodX). This family includes TodX from Pseudomonas putida F1 and TbuX from Ralstonia pickettii PKO1. These are membrane proteins of uncertain function that are involved in toluene catabolism. Related proteins involved in the degradation of similar aromatic hydrocarbons are also in this family, such as CymD. This family also includes FadL involved in translocation of long-chain fatty acids across the outer membrane. It is also a receptor for the bacteriophage T2.	2.82927e-61
NZ_CP010327.1\|WP_006257320.1\|1884140_1884920_+\|glutamate-racemase	gnl\|CDD\|234851	PRK00865, PRK00865, glutamate racemase; Provisional.	5.91096e-99
NZ_CP010327.1\|WP_006257317.1\|1888174_1888531_+\|phage-holin-family-protein	gnl\|CDD\|377198	pfam04020, Phage_holin_4_2, Mycobacterial 4 TMS phage holin, superfamily IV. These proteins are predicted transmembrane proteins with probably four transmembrane spans. The 1.E.40 is represented by the mycobacterial 4 phage holin, but it also contains many cyanobacterial. proteobacterial and firmicute proteins. Holins are encoded within the genomes of Gram-positive and Gram-negative bacteria as well as in those of the bacteriophage of these organisms. The primary function of holins appears to be transport of murein hydrolases across the cytoplasmic membrane to the cell wall where these enzymes hydrolyze the cell wall polymer as a prelude to cell lysis. When chromosomally encoded the enzymes are therefore autolysins. Holins may also facilitate leakage of electrolytes and nutrients from the cell cytoplasm, thereby promoting cell death. Some may catalyze export of nucleases.	1.07371e-23
NZ_CP010327.1\|WP_039328846.1\|1912434_1913349_+\|pentapeptide-repeat-containing-protein	gnl\|CDD\|224276	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown].	4.65396e-07
NZ_CP010327.1\|WP_006257311.1\|1892467_1893139_-\|response-regulator-transcription-factor	gnl\|CDD\|225107	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription].	8.1389e-13
NZ_CP010327.1\|WP_006257310.1\|1893131_1894877_-\|tetratricopeptide-repeat-containing-sensor-histidine-kinase	gnl\|CDD\|226951	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms].	1.4426e-18
NZ_CP010327.1\|WP_006257315.1\|1890044_1890704_+\|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP	gnl\|CDD\|184722	PRK14514, PRK14514, ATP-dependent Clp endopeptidase proteolytic subunit ClpP.	6.59816e-125
NZ_CP010327.1\|WP_006257304.1\|1899500_1900574_+\|HlyD-family-secretion-protein	gnl\|CDD\|224482	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms].	3.46105e-70
NZ_CP010327.1\|WP_006257306.1\|1898163_1899501_+\|TolC-family-protein	gnl\|CDD\|224455	COG1538, TolC, Outer membrane protein [Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion].	5.36154e-24
NZ_CP010327.1\|WP_006257307.1\|1897244_1898033_-\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	1.04305e-24
NZ_CP010327.1\|WP_006257314.1\|1890707_1891949_+\|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX	gnl\|CDD\|235422	PRK05342, clpX, ATP-dependent Clp protease ATP-binding subunit ClpX.	0

>NZ_CP010327.1|WP_006257310.1|1893131_1894877_-|tetratricopeptide-repeat-containing-sensor-histidine-kinase
MKRTLLTSYSSNFLWIIILSFLVCSCNKSDDTKVIDLKKLDSAYHYQQKADSLYHLNQLDSAFNNYLKSNQLFKHLAKTESITYNNLRISTIYLIAGDPNSAQEILVNEISQTNNISPTFKNYIYSILATCYSELIDYDLSNKYAYKSLRISNISVEAKAIINNNIASNYISLKEYTKAIDILQDILSSNVFKEMPLEQARCLNNLGKALYLQDKSQGLKELEEALAIRLNDINQNDIYRSYINLAEYYTLNKDYHSAHDYALKAYEITTTNKNKKDKLQALEYLIKSSTDSPSKYYADYIDLSKEIATETQQAKNQFAKIRYDFEQHEQENIKLKLDLQHSELVSARSKNALYVSLLCLLAGGVITSFIYRRIKHRHRLDKIQQSYLTETKIAKKIHDELANDVFNALTYTQNFNLQTPETKNHLLSDLESIYKKARNISLQHSSIATDETFVTHLTNLFNEYTTANCQIIISGLDNFDFSLLDKNQKITIYRVIQELLVNMKKHSMATIVVFKFSEDKKHFKIFYSDNGVGIIQEDIKSKNGLSNVENRITNIGGTFIFDSTNKLGVKYNIQLPKKNYV
>NZ_CP010327.1|WP_006257311.1|1892467_1893139_-|response-regulator-transcription-factor
MFKKILVVEDYDSINIGIVQALSDNIPQVEVYSTKYCDDAWLKIQGAKNNNSPFDLIISDLSFQEDYRETKLKGGADLIKLIREQDDNLKIIVYSIENRFIEVSELIDDLKVNAYISKGRNSIKELLAAITYIQQEEKPYLSPDIKDVKDNPVTLVLQEEDLTILRLLAEGYSQSEMSHKFKEDNLSIASTSSIEKRISRLRVSFNAKNTTHLIGIVKDMGII
>NZ_CP010327.1|WP_006260559.1|1891981_1892320_-|hypothetical-protein
MQKYVYLLVISFFLLFSGCNEGRYTVMEPTEEDKAYQVEIDSILTIYSQHASIYSEIYPKALYGNKEALKRYSDLMLDINVLDNKLNLLINQNRITSNQLKKYMKLRKQFTQ
>NZ_CP010327.1|WP_006257314.1|1890707_1891949_+|ATP-dependent-Clp-protease-ATP-binding-subunit-ClpX
MAKEEMSCSFCGRAKSDTNILIAGIDAHICDRCVEQAYGIVLEEQQSKHLSDLSSDLLLKKPMEIRAFLDEYVIGQDQTKKVMSVAVYNHYKRLLQEMNGDDQDIEIEKSNILMVGQTGTGKTLVAKTIARMLNVPLAIVDATVLTEAGYVGEDVEGILTKLLQAADYDVEKAERGIIFIDEIDKIARKSDNPSITRDVSGEGVQQALLKLLEGSIVNVPPKGGRKHPDQKFIEVNTKNILFVAGGAFDGIERLISKRLNMQAVGYKSTVEGDQVDRTNLMQYIIPKDIKDYGLIPEIIGRLPVLTHMDPLDKTTLRAILTEPKNALIKQYEKLFEMDGIKFSITDEALDYIVDKALEYKLGARGLRSLCEAILTDAMYELPSQDGVKELNVDKDYTAQALNKNLLQRLEVAS
>NZ_CP010327.1|WP_006257315.1|1890044_1890704_+|ATP-dependent-Clp-endopeptidase-proteolytic-subunit-ClpP
MDFGKEFQKFATKHQGINSMYYDKIVSSMTPYIIEERQMNVASMDVFSRLMMDRIIFMGTAIDDYVANIIQAQLLFLESVDNEKDISIYVNSPGGGVYAGLGIYDTMQLIKPDVATICTGMAASMGAVLLCAGAAGKRSALPHSRVMIHQPLGGAQGQASDIEITAREILKLKDELYEIISKHSGQSMEKVHHDSDRDYWMIAQEAKEYGMIDEVLIRK
>NZ_CP010327.1|WP_006257316.1|1888628_1889951_+|trigger-factor
MNITRNNVDALNAIVTIELAKEDYQGNVDNVLSNYKKNANVPGFRKGAVPMSLIVKQYGKAVLFEEVNKILQEKLSNYLVEEKLDILGNPLPVANDINWDADVLKFDFELGLAPEFSLDLEGKNKIKKFKVVADDAMLDEQVEFIQKQYGKMISKEVVEETSEMVGTFANEEEGINNEVKIAVSDIRTKTNQKKFIGKKVGDQVTVSTKGLFEDDHKLMEVLAVDHDKVHGLEIDVVFTINEINETEKAELNQELFDKLFGEGVVTSVEQLKEKIKEDAEKQFASQADQKFLNDVYEHLLENTSFELPAAFLTKWLMDAGETPMTAEEAAAEYTKSEKGLRYQLVEGKVMSQYDLQLNFEEIKEYTTKLIKDQMAQFGQMDPEAKVVEDIVARVMTNQDEVRRISEQVMNEKVLALFNDKVKAEVKEVSYKDFVKEMYGE
>NZ_CP010327.1|WP_006257317.1|1888174_1888531_+|phage-holin-family-protein
MGFIIRLLITTGLVVLLANILPGVFVESFTTGLWVAVALGILNMFLRPILVFMTLPATIVTMGLFLLVINAVIIQLAAYFVNGFTVSGFWTALLFSVVLTFCQSVVNGFLQKDEPRRG
>NZ_CP010327.1|WP_006257318.1|1886513_1888142_+|hypothetical-protein
MKKRYLLLLPAIALLASCEPSIKDEIDGGTYYAGEADFSSYVAVGNSLTAGFMDGTVFKSGQKNSFPNILATQFKIVGGGEFTQPLFEDDMNDVGGLLFAGQENPGFPTRMIVNMMPGADGQAIGPQNIDRAVTIEATKQQKKAYHNAGVPGAKTFHLIAPGYGNPSGLLTTPATANPYFVRTATADNATVLGDAMSLKPTFFTNWIGANDVLAYATSGGEGVDQNKAGGTNPAMYGSNDITHAGVFKQVYEQITNTLTSEGAKGIVATIPDVTAIPFFTTVPYNPLSPKLIGEGNIDQLNSLIGLLKQILAKGGQGDRLQLISKTSANPLLIQDKTLADMSALLEGGVTQVVGAGLFPVKLTPEQIKFIAMSYGQARHATAKDLMLLTSKAQIGASLPQSTGNPTMDAMLKKGVSFPISDSFVLNPTEQANIKEATVQFNSIIKATATSKGLAVADMNDILNKAVSGLRVEDGQIYTANYFQGMGNLNTVMFSLDGVHLNGRGYAFIASEILRSINKHYKASIPLVNPAVYPGPTLMVGNK
>NZ_CP010327.1|WP_006257319.1|1885241_1886495_+|transporter
MIRKILSLSLLTLISTSAFAGGYRVAMQGNKQLAMGHTGVAVISSGAESLFFNPAASVYLEDKFNFSGGVSVLVADTKFQNKTYGWENETRNPGTPFYAYGTYKATDWMTVGLAIYSPYGSKVEWDKDWQGSHLVNNIDLKAIYFQPTVAIKVSKHFSFGGGPIFVNGGVTFNKNLSRSMTDEQGNRTNVTVEAKNVTAWGWTAGYMVNVDDHLRLGLNYRSKIVMDEKSGKSKFYDVPGYGQGLFKNGKIKAEMPLPAELAVGASYTWNKWLFAFDYNRTFWNAYKALEIEFVDNPTIGTSVNPRNYKDSSTYRLGLQYTMNDQLTLRAGWYYDESPVQEGYFAPETPRNDSRAYTGGFSYKFKNGIAIDMSLTYLHFSDTNSSYDYFMEDGQNVSFGGTYKSSVISGGLGVSYSF
>NZ_CP010327.1|WP_006257320.1|1884140_1884920_+|glutamate-racemase
MTKNNPIGLFDSGIGGTTIWQEINLLMPNEDTIFIGDQLYAPYGIKTKQEIIDLSLKNVEYLVSLNCKIVVVACNTATTNAISEMRARCHIPIIGIEPAIKPATILTKTSKIGILATKGTITSDFFTSKVKMYPDIEIIEQIGYNLVNLIENGGIHSQEMKDLLRSYLEPMVEKGIDTLVLGCTHYPYLIPIIETIIPKEIKIIDSGKAVAKQTKKILEELDLLTTRESKGTNYFFSNTDTSILKTFVPSNGIVEYRSF
>NZ_CP010327.1|WP_006257308.1|1895821_1896754_+|hypothetical-protein
MTLLTINDYTDSLKKHINKVQDLPQYTVLLSPSPAQLRNYCIGLCREDLSPDDKIILKDFFRGDSTELNDIVNSINRFELGWFKPIQSFLGKKTDTSKNHAVLEMVALMYDYEPRPYGKFRKSSVEIEEGSVADNQADSIIVEEKREAVEEKTIEDNIPPVQSFAESLPTTTPKNKFKRNLVIFTVIIIGLLGVGSLVSSMLSNDQCMKWEGDRYVAYDCGEATIKSFAGVSNEPVPYDKSILKNFKQISVDCDTEFFRKGKPKVWFVKTGEGKHDYFNNPGTGVHPISGKSLRPITQYHLNKYIYSKCK
>NZ_CP010327.1|WP_006257307.1|1897244_1898033_-|helix-turn-helix-transcriptional-regulator
MKIIDSLEFIDSIEEGVFINHEKSTKRYPLHQHQKGQLTYVEGGITYVTVDNVTYVVPAKYFFWIPEGVPHILRLSNSATVLHSLYFYISDDDKDPFYTTLGIYAASDLLIEMIAYTVCWHDKMVNQDTPNFVFLQALKNILPTFINKNIQLQLPFSDNPRITKITDYLDSSFGLPLTLTDISNKFNMSERSVSRLFQAELQISFLQYLKALRIVKAIELLMKTEHSVSEIANTVGYVTLGAFSNAFCEFTGTRPLEMRKNK
>NZ_CP010327.1|WP_006257306.1|1898163_1899501_+|TolC-family-protein
MKLGDFHLLAVLTSCVTMGYCQSTTLSISNKDTIQLSIQEIWEQTDLGSKRSLIQAKELQIRKENTDDARISRYPVFNAFGKAEKASNIPVYTNGIFNKPEQHDVIHTLYNTGVSMYLNLYSGNRQNLEIEERKTLEAKANIEADMTKSEVRLEAIKSYLALAKLTRFKKVITQDIAEHKEQLIEIEHLYKNGVVLKSDVLRATMEISKREMTLVQLQNDLSIENQKLVILTGRKDTDFIKPQDSFNEELFLESYDEALDIALEHGFKHLLSEESLVLSEIEQKKVKANTKPSIGLIGNFTMANPQIFLYPYNPSWYSLGTIGVQVSFPISNLYQNVHKVRSRALEHEKEELQHQYVQDQIKEEVQQAYLRYQESLVQIEVCTKNKEYAAENARITKSTYFNKISLLTDLLDADVQHLQTQFELEAAKLDSIYKYYTLQFAKGLL
>NZ_CP010327.1|WP_006257304.1|1899500_1900574_+|HlyD-family-secretion-protein
MDIKTRIKITDRLITRITRYLASIIILIGSLWGIHTLWMYWKYEQTNDAQVQEYINPVISRVGGFLTEVRFEENQIVNKGDTLLVVDNREYTYDQATTSAEIAKQYALIKELDARQYTLSQTAAAAKSQIQGRESKYHQQELDYQRYKKLYEEDAATAQMLEEKQAQLNIGQSDYNTSVEHARAATASIADIEAQKQVLLKEITRLQELEKYKNLTVGYTVITAPYRGRMGKRSIDLGQMISVGQVLTYIVNDETPKWIIANFKETQIRNIQIGHQVEVVADAYPDRQFIGKVISIAPATGSSFSLLPPDNATGNFVKIVQRIPVRIEIISPADSEELLKAGMNVNVFIAKKQSNAK
>NZ_CP010327.1|WP_006257301.1|1900563_1902159_+|hypothetical-protein
MQNNEASQLFVDWIPEWMIHVILFVLLMPSIVLFFLPAANATAAAGYFGCDPRDIQFSVSLLYAGFVSFYSLERRFFTYLATKEYFILFNVLQIVGCIVLYNVQALCIVFPVRFLQGMLFASTVNLSISTLYVRLDSSKAREISFSCFYGILICATPFNQLITSDLVDQYDYSFLYKIASFSFIPGLILIMLTMRFVRLQRKLPLYSLDWESFVLFAVVVVLFGYLTIYGQQYYWFADRDIRLIGLTILITLFFFVWRQKHLKRPYINWHVWKYRNFKIGLFLLFILYICRFASGITNTHFINSLHLDPRHLSYLNSFNLIGLVTGVILACVWLINRRPMRFIWSLGFIALFLFHVGMYMQFAPSANPDDYYLLLFCQGLGVGVLMVPIIVYCVTSVPVSLSASAAAVCLGVRYFGYTCSIAIMNYYSLYSSNRHLSRFSDYLNIANPILETKLTQNTMKLKSRGMPSSIAEKASEKIMLSDLSKQIELRYAMDYFEILSLLLLVIIILVLFTPYLSKTWVYLKSKSVSPF
>NZ_CP010327.1|WP_039328840.1|1902878_1904309_+|hypothetical-protein
MDRKKFILSSSFFLLGMNFLKASTLIPSSCFQEPIKGNTNINLLLKKAADLRKSNFVKKQNKGAMSRRMFFSSPINGTNNIYAIYDQILEDSPTEIRAYNGKRKLMLQESESVLDIVNMYLKGVELNSHDALFKDRLAKEYLRVLTGSFKSIKSLPSPLNNKKKLLDAIEKYYVEAIALDSNNQQLLVQLEKLRELKGLGFFEVDSRKNKQLKNRKKANKALVRNENRLMTSNDHLKKIKRLNARNIDDYRNSELQLSEKKYIKSLQKEKNYAKAVEESVKYYKRNPEDVDGLKLVRITLKKNKRYDLLESIERDNNKRQNTLWSHIALFNVLMKRIELTRSKNYTELDTILLNAKKLAEFNNEKFELKCKELFLGIYKKTPSMSQQLLEYGQELVGLRVPYRIDRYTRLCVDYYMSIGEIDKALTAIDIVVSLNTDSQLEDGILDTLKRIAEFREKTIEGQDEELIFLKQKILNA
>NZ_CP010327.1|WP_039328842.1|1904313_1905546_+|hypothetical-protein
MNKVILKVCLSISLLLSIQECLGQIAITEVLYDTAFDEQPATFMKGHTRNYYTFKDKAHHLGEYIELYNYTTEDIPLKGWFIYDNASKYNLPEDIVLKSQEYLIIAYRDLENKKDIGDYFSIFYPTVKNKRGKVIYQDYMILNNKKDDIALFTKSLAGIDLNREFLIDRVKWDNTGQQKSSNELRDKGYKSLNNRNFYVNSLQLEANGRYVEKSATPFTATYLPKTQRLLDIPIVQEALLENVAKYDWSAYVNELIMQICNLNISLVQQFPKGNYSKGELCFIHDAAGNYLRTEVCRTSKVMSTPIIKTNIIDEIEKKTIPKTISEYRDYIVVYPNPTSGKIKVSIDEVIRGKIVKTEVFSVTGASILSKEVEYKQMEVAIDITSYPVGVYILKFSLLTGESFSVNVIKK
>NZ_CP010327.1|WP_039328844.1|1905548_1912430_+|hypothetical-protein
MLKYIKTLYVILFLVLSNSILAQNGEVSLVFDTSGYQKDQNNQRAFSAPITKDNTIASIKGEGTVGSTGGFNYVVPIDVVQGVNDFQPNLSIVYNSHSGNGVAGWGWNISGLSIISVGSKSKELDDSNRPVQYDGKDPYYLDGARLLSADGVNFKTLLYSEIKIQKVNKDDFSFIVYYPNGKIAKYKTVSNSGEALRETHMISEMSDANGNKIQYEYFVETDNIYLSKITYGHSTARNCIKFNYKNRKVSQAKYQRGRTAFNKKVLSDIVVCTPGNENGVYKKYNLTYDFIHQNSIERLIKIEVQNSRGELLNPLRFTYTTDKSKGVLDYKYERFSYLNDIRGIGDIVVGDFMATGKLTPVYEIEVLNSHKSNKPRLIKLWNTGKGEVEKYENQNKRLYSGKALVDKTVDGKTERIISHGDLLLTLKSDYSKNDRDEYVLSFYDLSGTSNYKDQSYVKFSLPGIIVENDYTYVNVPEKDWQGKPTAWTKKEKKYSSKDIEYPHNTLKSTNIRDKKHRKILLADFNNDGLVDLLIFSPKGVDKNSRATFHFYEIGKIERHQQQIELKELKYNSDVKFEEDTNVYPIDFDGDGLADFMTVTDKGELQMLKLDSENLSISKIYIGIDKLDNFTKKTPIIFGDFNGDGLTDFIVPDKVYDLDKSDAKSELTKMSRDKLEWWSYISTGKQLIKEKKDFTEQKLAYITPSQHHDIKRSSGWDKFWSGTPDKYRGTEYGTSNIMAIDVNGDGVTDLVSFRKFGKLRYEENLTRTKYDKDIGFESPLKERDGIQFYIVNSTSNGDFKVSSSPVRNEKGEAGFSLATTNISPFSLILNKSDFNSLNAYKNGIIIHDPIERREIHYTIDNDGFVEGQLSAVDNGAGSVLNVEYRPMSEDNNTKDEKIYTFSNLNLPYPYYVHKSNGGFRLVHKIHSLTSDKILTKEYRYHNGIQHLQGKGFIGFQQTKSSETYESELKSDGKYRIKDFSKGMFWRINTYDPLMDNVQISATYGSLSEKALFSKSTVINKRYDKGNKSYIIVPIQETMYDYLNGFETSKTNWYESGASTFYLTKAETNYYSPSLNGSSRTLSGSKIEEFSYLPKFTDSESGAIFYGLFSEVKTTSRRGNDSFSSKEVFKYNTKGAVSSSQKYGNGTAAITTEYEYYDFGGVKKEKVFTAGIAPLVTSYEYDNSKRFVIRTVAPDGLVSTSVVDTYGKVLSSTDGLGRSTKFNYDSWDNAITVTDYLGNKVMTTRSNSTAKGGKYDVTVTGADGSVSITSYDVLDRVIQTRVKTLNNKWSTTRTEYDVFGNVVRSSQPYYEGENVKWNSTVYDRLQRPVLIVDYKGREFKTCYEKNKVTVEDGHKKMSKWVDAQGYVIKTQDQGGVILNTYYANGSLKEANYDGIRTSISIDGWGNKTQLVDPSAGTYTYAYDNLSRLLKTTTPNGGQTTYTYDELGRTKEEKTVGGKEENTNIAIKYSYDERTKLPNSVSGNYNGQQFSYTTNYDKYGRVLGKIENTPKFIYSNTYLYDQLGRVDEVNISTALKDSGVTSSSKVVNVYDSSGILKMQKDGRGGNAITIWDIQDVMANGSAKKVAYGNGFSVENSYSPNEYLSNIRHSRSGHSLVDIGYNYNEKRGTLSTRNDKVFGKNESYTYDDLDRLLTESTNGTLVNEYTYDPRGRITSNTEVGKYNYNSSDYRLQSINFNDKGSKLVQDRGFAVVKYNMFKSPNEVYLEKKGRINYEFSILKSRYAAYFGSTDEKSKQPIQKYYSADKAIEIVVTKDKTQIITYVTGDPYSANYIKIDEVKGTSINNSKWYYLHRDNQGSIVAISDSNGNNIEQRYFDAWGNLKGAKIKGANQTINALGWTAALLIDRGYTGHEHLYTVGLIHMNGRIYDPALRRFLSPDNYVQDNTSTQSYNRYGYVLNNPLLYTDPSGEFIPLVTAIVVGVAIAVGTTAIINIANGVPFWYGMGKSAAMGALSGAISFGIGSAVSSLTSTVSFFAQAGMHGVSGGLMSELDGGKFISGFASGAISSMISSGIGKLGPKTDANGNIIKEGVLSASDTKAMMIVGGGLSGGISSSIAGGDFMKGMQQGLITSGLNHAMHEATSGWDQDPPSKESSSSNDLWDKIVSAWADFTGGSEATRVHSEAMSLSTSSTGGVDWAGYGAYTLMMEKASNPGNLEMGRGLFGRTSIAGGGVTARLQKYVTKAANRIDALGDLAFTNKQLAAIQRKPSLRAMYRGNRIDVLARSYIEKDRSLRHLKSNYSKGPDFVDPKTGQWWDMTTPGQWQKHVNQYGPGGTLLNTK
>NZ_CP010327.1|WP_039328846.1|1912434_1913349_+|pentapeptide-repeat-containing-protein
MIKKKMVDRWNLCQKLKMVKDKVGSLLLKGGELSSISNSIEFVEGKLDLRGLDLKTKTIRKLKVCDADFSFSMFNDCWVEKSLFERCYFEKVDFSSFSDHGNIFKECVFKNCKFNGAVLGYDGTKFLECEFIQCSFAKAIFIRPEFVGVFFKNSRIKGLDFNASSFEECDFEGQLNDIWFRGGFPLKSDNKEFGSPKKNEMKNVSFVNAELHDLTFSDHCNLLNVEINASGKYYKFDRWSERLLLMKESISNWNVEEQREIEIFINVYSVHAQNQEWHILNIEDVEREYGKEIAYKIVSFLNSI
>NZ_CP010327.1|WP_039328848.1|1913620_1913980_+|hypothetical-protein
MNLIRNNKLLYTFDDEVVSKFVYDIDKNKIELSFDGFYDLEKDEVIDRKCILIIESWSKALSRLYPNSKFDNLESSFGIISMIVAVNVEYDEVYMTVSTIDNRHYDLIFLKPSLYISLI

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Crispr_ID: NZ_CP010327_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010327_5

2310238-2310510

Orphan

Consensus_repeat	Method
AAACCACACCAGCATTAGTAGAGACGCAATATTTTGCGTGTCACAGTTAATGTTTAAAGAACAT	PILER-CR

2 spacers

The CRISPR arrays of NZ_CP010327_5

>merge|NZ_CP010327|5|2310238-2310510|PILER-CR
AAACCACACCAGCATTAGTAGAGACGCAATATTTTGCGTGTCACAGTTAATGTTTATAGAACATGGCACGGATTATAGATCCGTGCACACTGATATACGGTACAGGTTATAAATCTGTGACAGCAAGTAGAAACGCAATATTTTGCGTGTCACAGTAAGTAAAGGCACGGATTATAAATCCGCGCCAACTGATATACGGCGCGGGTTACAAACCACATCAGCATTAGTAGAGACGCAATATTTTGCGTGTCACAGTTAATGTTTAAAGAACAT

>NZ_CP010327|5|2|2310238-2310510|PILER-CR
AAACCACACCAGCATTAGTAGAGACGCAATATTTTGCGTGTCACAGTTAATGTTTATAGAACAT	GGCACGGATTATAGATCCGTGCACACTGATATACGGTACAGGTTATAAATCTGTGACAGCA
AGTAGAAACGCAATATTTTGCGTGTCACAGTAAGTAAAGGCACGGATTATAAATCCGCGCCAAC	TGATATACGGCGCGGGTTACAAACCACATCAGCATTAGTAGAGACGCAATATT
TTGCGTGTCACAGTTAATGTTTAAAGAACAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010327.1\|WP_006256953.1\|2313368_2314616_+\|DUF4374-domain-containing-protein	unknown	unknown	gnl\|CDD\|373002
NZ_CP010327.1\|WP_006256955.1\|2311745_2312696_+\|3-phosphoglycerate-dehydrogenase	unknown	unknown	gnl\|CDD\|240628
NZ_CP010327.1\|WP_006256949.1\|2318551_2319970_-\|MATE-family-efflux-transporter	unknown	unknown	gnl\|CDD\|240544
NZ_CP010327.1\|WP_006256959.1\|2308259_2308487_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006256948.1\|2320363_2321212_+\|GLPGLI-family-protein	unknown	unknown	gnl\|CDD\|273495
NZ_CP010327.1\|WP_006256964.1\|2304078_2304477_+\|acyl-CoA-thioesterase	unknown	unknown	gnl\|CDD\|224523
NZ_CP010327.1\|WP_006260734.1\|2321249_2322098_+\|GLPGLI-family-protein	unknown	unknown	gnl\|CDD\|273495
NZ_CP010327.1\|WP_006256967.1\|2299319_2300723_-\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP010327.1\|WP_006256957.1\|2309121_2310180_+\|acyl-CoA-reductase	unknown	unknown	gnl\|CDD\|143399
NZ_CP010327.1\|WP_006256963.1\|2305289_2306108_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006256958.1\|2308696_2309047_-\|4Fe-4S-dicluster-domain-containing-protein	unknown	unknown	gnl\|CDD\|365826
NZ_CP010327.1\|WP_006256966.1\|2300736_2301912_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|234864
NZ_CP010327.1\|WP_006256954.1\|2312728_2313205_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006256965.1\|2302058_2303552_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006256960.1\|2307305_2308142_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006256956.1\|2310657_2311725_+\|3-phosphoserine/phosphohydroxythreonine-transaminase	unknown	unknown	gnl\|CDD\|235428
NZ_CP010327.1\|WP_006256952.1\|2314697_2317076_+\|TonB-dependent-receptor	unknown	unknown	gnl\|CDD\|238657
NZ_CP010327.1\|WP_006256951.1\|2317203_2317914_+\|CPBP-family-intramembrane-metalloprotease	unknown	unknown	unknown
NZ_CP010327.1\|WP_006256961.1\|2306486_2306741_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006256950.1\|2318046_2318514_+\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|225064

Protein	Function_ID	Function_description	E-value
NZ_CP010327.1\|WP_006256953.1\|2313368_2314616_+\|DUF4374-domain-containing-protein	gnl\|CDD\|373002	pfam14298, DUF4374, Domain of unknown function (DUF4374). This family of proteins is found in bacteria. Proteins in this family are typically between 406 and 466 amino acids in length.	3.18918e-37
NZ_CP010327.1\|WP_006256955.1\|2311745_2312696_+\|3-phosphoglycerate-dehydrogenase	gnl\|CDD\|240628	cd05303, PGDH_2, Phosphoglycerate dehydrogenase (PGDH) NAD-binding and catalytic domains. Phosphoglycerate dehydrogenase (PGDH) catalyzes the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDH comes in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases. PGDH in E. coli and Mycobacterium tuberculosis form tetramers, with subunits containing a Rossmann-fold NAD binding domain. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence.	5.19357e-73
NZ_CP010327.1\|WP_006256949.1\|2318551_2319970_-\|MATE-family-efflux-transporter	gnl\|CDD\|240544	cd13139, MATE_like_14, Uncharacterized subfamily of the multidrug and toxic compound extrusion (MATE) proteins. The integral membrane proteins from the MATE family are involved in exporting metabolites across the cell membrane and are responsible for multidrug resistance (MDR) in many bacteria and animals. A number of family members are involved in the synthesis of peptidoglycan components in bacteria.	0
NZ_CP010327.1\|WP_006256948.1\|2320363_2321212_+\|GLPGLI-family-protein	gnl\|CDD\|273495	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein. This protein family was first noted as a paralogous set in Porphyromonas gingivalis, but it is more widely distributed among the Bacteroidetes. The protein family is now renamed GLPGLI after its best-conserved motif.	5.18011e-28
NZ_CP010327.1\|WP_006256964.1\|2304078_2304477_+\|acyl-CoA-thioesterase	gnl\|CDD\|224523	COG1607, COG1607, Acyl-CoA hydrolase [Lipid metabolism].	1.85574e-35
NZ_CP010327.1\|WP_006260734.1\|2321249_2322098_+\|GLPGLI-family-protein	gnl\|CDD\|273495	TIGR01200, conserved_hypothetical_protein, GLPGLI family protein. This protein family was first noted as a paralogous set in Porphyromonas gingivalis, but it is more widely distributed among the Bacteroidetes. The protein family is now renamed GLPGLI after its best-conserved motif.	2.72342e-31
NZ_CP010327.1\|WP_006256967.1\|2299319_2300723_-\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP010327.1\|WP_006256957.1\|2309121_2310180_+\|acyl-CoA-reductase	gnl\|CDD\|143399	cd07080, ALDH_Acyl-CoA-Red_LuxC, Acyl-CoA reductase LuxC. Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.	0.000133988
NZ_CP010327.1\|WP_006256958.1\|2308696_2309047_-\|4Fe-4S-dicluster-domain-containing-protein	gnl\|CDD\|365826	pfam00037, Fer4, 4Fe-4S binding domain. Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich.	0.00914296
NZ_CP010327.1\|WP_006256966.1\|2300736_2301912_-\|2-isopropylmalate-synthase	gnl\|CDD\|234864	PRK00915, PRK00915, 2-isopropylmalate synthase; Validated.	0
NZ_CP010327.1\|WP_006256956.1\|2310657_2311725_+\|3-phosphoserine/phosphohydroxythreonine-transaminase	gnl\|CDD\|235428	PRK05355, PRK05355, 3-phosphoserine/phosphohydroxythreonine transaminase.	3.78506e-174
NZ_CP010327.1\|WP_006256952.1\|2314697_2317076_+\|TonB-dependent-receptor	gnl\|CDD\|238657	cd01347, ligand_gated_channel, TonB dependent/Ligand-Gated channels are created by a monomeric 22 strand (22,24) anti-parallel beta-barrel. Ligands apparently bind to the large extracellular loops. The N-terminal 150-200 residues form a plug from the periplasmic end of barrel. Energy (proton-motive force) and TonB-dependent conformational alteration of channel (parts of plug, and loops 7 and 8) allow passage of ligand. FepA residues 12-18 form the TonB box, which mediates the interaction with the TonB-containing inner membrane complex. TonB preferentially interacts with ligand-bound receptors. Transport thru the channel may resemble passage thru an air lock. In this model, ligand binding leads to closure of the extracellular end of pore, then a TonB-mediated signal facillitates opening of the interior side of pore, deforming the N-terminal plug and allowing passage of the ligand to the periplasm. Such a mechanism would prevent the free diffusion of small molecules thru the pore.	1.79237e-35
NZ_CP010327.1\|WP_006256950.1\|2318046_2318514_+\|GNAT-family-N-acetyltransferase	gnl\|CDD\|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	5.45529e-68

>NZ_CP010327.1|WP_006256957.1|2309121_2310180_+|acyl-CoA-reductase
MNLDVKKNAFVKLGQFLSQFAANEFVKNNDVCHNDEFFSKFEELIHSSVNYNGWFTLEQVVISINSWASALTQDNLEKWTSKYDFSTEPNKRVGLILAGNIPLVGFHDFISVLISGNIAKVKMSSNDQKLLPFLANYLVAVEPGFASRFDFIEGKMEGFDAVIATGSNNTARYFDYYFNSVPNIIRKNRNSVAVLDGTESHEDMVALGKDVFTYYGLGCRNVSKIFVPEGYVFDSFYQGMFEYKDVIEYEKYSNNYDYNKAVFLMSEFKILDNGFLTVKEDKGYASPISSVFYEYYTDINEVKARLAEDVDKIQCIVSNNLVDGSIAFGQTQEPQLWDYADNVDTIEFLLGL
>NZ_CP010327.1|WP_006256958.1|2308696_2309047_-|4Fe-4S-dicluster-domain-containing-protein
MAIIITDECINCGACEPECPNTAIYEGADDWRYKDGTALTGKVVLPDGTEVDAEAAQEPVSDEFYYIVPSKCTECKGFHEEPQCAAVCPVDCCIPDDNHVESEETLLQRQAFLHKH
>NZ_CP010327.1|WP_006256959.1|2308259_2308487_-|hypothetical-protein
MNKSHAFWITAMILITTSAFADSPSIKIWGGGLTLGSLIAVFLSWTRNKSILWAIVHFFLGWLYVIYYFFSNNSK
>NZ_CP010327.1|WP_006256960.1|2307305_2308142_+|hypothetical-protein
MKVLFKSTLLFVAIVISSLGYSQTTPGGSALRQSRMKFTGNDIIKSILKKNENITFTRYFNGGFEVDSTRSWTNRVVYTGSVLADNKYEFKSKIYKRDLNTKEETLYMDRVVTYLNKKEKGSTLVTKQFLLDGLIEEITTVNKEKVIKCYSKDGKVINTDGCLLYTRFKFPKDKMIDLSEKVKAKITNTIYTKNGSVPNYILVNIESDYKAQKWNLALDFPRNYSSDNAMYTELVTDIMYALKNEKLEDYHFNRDINGNYYNSNLIVPITFNKAVNKR
>NZ_CP010327.1|WP_006256961.1|2306486_2306741_+|hypothetical-protein
MFTRYFNSINAVDSVSTWDRVVKYTGKSLKDNQYLLMTKTYKLDIETRKLVKEEESKRTLLDKKGKKQVYIRKQFLKGGASRRV
>NZ_CP010327.1|WP_006256963.1|2305289_2306108_+|hypothetical-protein
MKGLLNIVLTVVLATTTMTVYGQKKKRNVKQYNSVEVYRANDVIQDLLKSGRDTVFTRHYLSSFLVDSTRLWKEEVKYTGEKLDDNKYKLSAQSRLKEKNSDELKLNTESEKVYHKNKSDAVYVLNKRYLVDGLVEEVVHQNKQYVVKCIDKEGNVLNETGCLRYSQTPFPVEKTEKFQNNLQKTITNLVSKSKGRLPRYIILAIEADYESQRWNLALDFPKEYKLGSDMHTSLVAAIAHVLNNEKLEEYHFDKDINGNYYNRTMFIPLSFR
>NZ_CP010327.1|WP_006256964.1|2304078_2304477_+|acyl-CoA-thioesterase
MLIEAEIEERKSKAITSVFKVVFPDTTNHHNTMFGGRVIMMMTETAFMTATRFCRKNFVIVSSDKIDFSKPIPAGSLVEMVGEVESIGNTSIRIRVNVYREKMREDERIQVVTGVFTLVALDDNFKPISILD
>NZ_CP010327.1|WP_006256965.1|2302058_2303552_+|hypothetical-protein
MSNWGKDWLFILIKSLTRSEKRQFTLYVNRLQNNADAKFISLFNAMDKMEEYDEQVILKQKITSKQQLSNLKANLYKAILASLRMNPSKKNVRIQIREQLDFATILYQKGLHKQGLKILDKAKQIALDVEEKSLALEIIELEKVIESQYITRSITGRADELIAQSNDLIIQNYYATKLSNLSLKFYNEMLTSGYAKSEEDKQELITRFSDQLLDIDVKVLNFREKLWYFKAHVWLCFLIQDYHNAYKYAKLWVTLFYEHPKMIQSHPIWYLKGNSYLFKILLLFKSVDKYIYWNSKLEEQLALESFPQSMNIDSQRFLLQFSNKLNIEFIQQTYNGSLLFVKQLQRGINEYRNMIDEHHFHILYFKVASLYFGYKKYDDSLAYTERILNKSDYSVQEDLLFHTRILSLMAQYESGKDQHYEDFIKANRALMKKMKNKTQIHDTFMSLFEGLLGASVKDQKLVLERFVKETEELYTNRFYVRSILYIDVLNWAKKKIA
>NZ_CP010327.1|WP_006256966.1|2300736_2301912_-|2-isopropylmalate-synthase
MKTEKIEIFDTTLRDGEQVPGCKLDKQQKLTIAQQLDELGVDVIEAGFPISSPGDFEAVQAISKIVKNAKICALTRANTKDIDSAAKALEFAQKPRIHTGIGTSDSHIKYKFNSTQEAIIDRAAEAVAYAKKYVHDVEFYAEDAGRTDNAYLAKVCEAVIQAGVTVINIPDTTGYCLPTDYGNKIKYLRDHVKGIENVILSCHCHNDLGMATANSIAGIINGARQIECTINGIGERAGNTALEEVVMILKQHENLGFHTDINTTMLNHLSQLTSSTMGMVVQPNKAIVGANAFAHSSGIHQDGVIKRRDTYEIIDPKDVGVDASSIILTARSGRSALAYRFKNIGYDVTKTELDTLYEYFLGVADTKKEVTEVDLFAIMNMYTQNQIIKHA
>NZ_CP010327.1|WP_006256967.1|2299319_2300723_-|3-isopropylmalate-dehydratase-large-subunit
MSKTPKTLFDKVWDAHVVESIENGPDILYIDKHLIHEVTSPQAFDELKKREIPVFRPQQIIATVDHNVPTLNQELPIKDPLSKQQVEQLAINCKENNITYYDLGHPYQGIVHIIAPELGITQPGMSMVCGDSHTSTHGAFGTIAFGIGTSQVAQVFASQCILMNKPKTMRITVSGKLNAHVQPKDVILYIISQVGTDAGTGYFCEYAGNVFEEMSMEGRMTVCNMSIEMGARGGMIAPDKTTFDYVKNKTFAPQGEEWNQKVAYWSTLPTDKDAKFDCEYHFNAEDIKPMITYGTNPSMGIDIDTFIPFNKNESEEKALNYMGLLPGQAIDTIPIKHVFIGSCTNARIEDFRVAASYIKGKQISKDINALIVPGSQKVVAQIKEEGLDTVFQEAGFIIRQPGCSACLAMNEDKIPSGEFCVSTSNRNFEGRQGQGARTLLASPLTAAIVAVEGKITYSKMNEYASLN
>NZ_CP010327.1|WP_006256956.1|2310657_2311725_+|3-phosphoserine/phosphohydroxythreonine-transaminase
MIKVHNFCAGPCLLPDEVYKGAADAVLDFNGSGLSILSISHRSKEFIAVLEEAQHLALSLLGLDGKRYSALFLQGGASMEFLRVPYNLMQKRAGYIDTGNWSSKAIAQAETFGQVEVLATSKDRKYAYIPEDIVIPSGLDYVHYTSNNTIYGTQFSDVPKADCPIVCDMSSDIYSRVYDCDKIDLIYAGAQKNIGPAGLSVVLVKDSILGKSGRMIPQMMDYAEHIDKGSLYHTANVFAIYTSLLNLRWLQRLGGVEAIEKINNQKAATLYRAIDELDYVVGLADVAYRSKMNMTFDFKEETMRRVFDTLCMEANITNIKGHRVAGGYRASLYNALKQESVDALVEVLHTMKSKI
>NZ_CP010327.1|WP_006256955.1|2311745_2312696_+|3-phosphoglycerate-dehydrogenase
MRILANDGIPEEVKNDLEGLGFEVKEVRVAHEQLVNYTSKNEIEILLLQQGTLLNKKMIDEMSHLKAIVFAGTSIDLDSIDYIKSCGIKVIWAEEALSNATAELVFAHLFSGCRLLQESNRNMPLEGDASFKSLQQSYSNGIELAGKTLGIIGLNTAGEKVAQKALALGMNVLYTDASVPEIKADFVLPNGIHFRVDLASTDMHRLLHDSHFVTIHTKHYQKYILDKEAFSHAHNLIGVINCAYPEAINEVDLVDVVNAETVLFAGIDRFEEEPHPAIQVLMQPAFSLSPNINASTDESKVLIWDEIFEKMQVLRK
>NZ_CP010327.1|WP_006256954.1|2312728_2313205_+|hypothetical-protein
MLEQITKLVEQISSSEVAKGGITSDLTSAVTKETGDSIINGLKDSVSSGDISGLTNLLSGQASNIASNPIVTGMIGNLISGLVGKLGLSEGVAGSFANGVVPQVVSAIVAKIQGGESGFDMSTILSGLGQGGAQDMLGSLLGGKEGLGGAIDKLKGLF
>NZ_CP010327.1|WP_006256953.1|2313368_2314616_+|DUF4374-domain-containing-protein
MKKYLRSLLVLGLMASIASCSSDDNSSPNDETEEGGGENQKVERFVIAASSVEHTDIADYLLTVEDIEKGSVSLINNGIEQDGAYRYYLTAKNKFYSLLYGQGNPGAVTAYALNKNGKLEKTNNFVTETVQVYGAIDNDFVMWKVPRSGVEIAPWYIVNTDSDVITKQGVINTVELANNGERAHFSGLTQIGNKLVAPYFSMRGITGDVWGTSFPNTAWAAVYEYPSMKLEKVIKSDKSSYIGGYFKNGLIQDEKGDGYAFSSANVTEKGKLLSKNPSGILKIDGKTLEFDNTYFWDIEKSTNGYFVNNFIYAGKGNFIARLENNKLESGDVRYASLNVYTKTFKWVEGLPEGIKDLGFSDKGNYAVMDGKTVYVGVTTKEGSFVYKMDAEKGTATKGIKVEGGTITAITKVASK
>NZ_CP010327.1|WP_006256952.1|2314697_2317076_+|TonB-dependent-receptor
MRSFIKYFIVVFLGTIHLGYAQELVSIQGVVKDNSGEIVIGATVVIKENNKFGQTDSNGRYIIPKLQSNKQYTVEVSYIGYTFFSQKVTVNGDKVFSITLTPDNYNLSEINIQGKSKVQLVKEKAYNVAVVDAVKLHNRALDIGQALDKTSGVRVRQDGGVGSAMNISLNGYSGNQIKFFIDGIPMDNFGSAFQMNNIPINLANRIEIYKGVVPVGLGSDALGGAVNIITNTYDKTSLDMSYSYGSFNTHRTNVNFVFVDKKSGFFTQLNAYQNYSDNDYKVRVNVNDITSGKIIGQNIKVKRFHDKYHNENFIGQIGFINKSFADRIAFGINLGQSYKEVQTAARMEAVFGNLHQRGDIVMPTFVYKKNNLFTEGLDVSVNANYNLGSDQVIDTVYRRYNWLGDYVDFEEMYGKKGGERNRTMYKYKNNNGMVNTIVNYKLGDKHNFSLSNTINFFKRKGKDELYPDDVLKNKPSETTKNISGLSYQYTPSTIWGVTVFGKYYNQHIKYTDSYNPSGQWGDYAYRNYSKDTNDFGYGITGSVFVREDLQLKTSFEKSVRLPASSELFGDKVNITGNFGLKPEISYNYNIGVTYQPEISKNHSFILDINGFYRDSKDFIYQEPSGTNKNETKFGNLAAIKNTGVEGEIRYFFKRNFNIGVNGTYQNLINTNKYVGGVESILYKDRLPNIPYLYGNIDVNYTFNKVFKDDNLTLGYSVSYIKEFYLYWPSLGKDKFNIPDQVSHDFVITYSFGKDTKYQFTFEGRNILDKMIYDNFSLQKPGRSFVGKFRYFF
>NZ_CP010327.1|WP_006256951.1|2317203_2317914_+|CPBP-family-intramembrane-metalloprotease
MSISVIISDFIHYIRQPHTEVLDISKKEKVRRSLVLVVFTLIVITVYIFSINKIVPLPKTARLLDFIADKGLLVAMLFIVLLGPLAEEVAFRLALRFKSWYLLLSTPLTLVYSLWILYRFNLSIAFIVGGVFYVILCAYLYLHRNNIVILKERHEKYFGYVFYSYTFLFMIMHISNFYTINTEVLVYSPLLFLPQFIGGLLLGYIRMRFGFGYNCMIHIIYNTILMLLLYGTGVIK
>NZ_CP010327.1|WP_006256950.1|2318046_2318514_+|GNAT-family-N-acetyltransferase
MNSIHWHTKAFDELTVSELYDIMRLRTDVFVVEQNCPYPELDGKDKKCLHIYATKLDQVVACARIVPPGLSYPEIAIGRVAVHADYRKDGYGRILMQHAIDKIEEEFGAQDIQIGAQCYLKKFYSSFGFVASSEEYLEDGIPHVDMIRKASEYTK
>NZ_CP010327.1|WP_006256949.1|2318551_2319970_-|MATE-family-efflux-transporter
MSTTTFKSKNNIFSLIKQSFSNENFDLTNMSINKAVFLLAIPMMFEMLMESVFALVDLYFVGHLKESAYAIQSVGLTESLLSIIYAICIGISMAATAIVARRIGEKDKEKAAQNAAQAITLSILITIVLSILGFIYAKDWLLWMGASEASAEYGYGYTRILLVSCVSIMLLFLINGIFRGAGNAAIAMKSLGFGNIINIILCPIMVRGWWIFPEMGLEGAAYSTAIGRSMGVVYQLYYLSKKDSLIQLKLKYFKIQWDMTWNIIKIAVPGMVQYMISTCSWVILARIVAQSGGEIGSSGFLTCLRLLVFFILPAWGLSNAASTLVGQNLGDNNPDRAYKSVIATLKYNVFYMAIVTIIFFSMAEILASFFTADEAIKTVAKEAMYIGAIGFIAYGAGMTLMNAFNGAGDTVTPTIINIVGFWLFQIPFAYLMTYHFNLGSTGAFIAIPSAELVIAILAFILFRRGKWKQKKV
>NZ_CP010327.1|WP_006256948.1|2320363_2321212_+|GLPGLI-family-protein
MIKRMYLTVAALCSVMLANAQEKIDVMRYEYQLTLPATTATGDEEALQSSTEIIYLDVKGGESRFASEGNIRREETLMEYSTGAKKDADFAVRMQALSQFKSRVKWAVYKNGAELNTYASSGIESYNVGETNDLVKWSISGDIEDYNGMKVQKAIGELSGRTWTVWFTQDIPLIDGPYKFKNLPGFVVKAEDSTGDYKFEFLKSERATTDFWLSNRQEKAMKIDKKQWDKIRNMNSNKSFSQIMNERGGTATFKMVDEKGKDITDEMTKKKMGKESKPIEFY
>NZ_CP010327.1|WP_006260734.1|2321249_2322098_+|GLPGLI-family-protein
MKKMLVISIVAFITSISGLAQEKIEVMRYEYQMTMPLAKTTDDINTSNSATEIVYLDVQNSESRFASEGNIKREETLIEYTTGAKKTADHTARFQALGQFRSKVNWIIYKDQANLNTYENSGIETYNVEEPSNLIKWNISGDIEDYNGMKVQKAVGELSGRTWTVWFTQDIPLIDGPYKFKNLPGFVVKAEDSTGDYKFEFLKSEKVTAEFWLMDRHKNAMKVNKKQWDKIRNVNANKSFSQMMSEIGAGTIVKVVDEKGNDITNDKLKKKTGKEAKPIEFY

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Crispr_ID: NZ_CP010327_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010327_6

2972175-2972248

Unclear

Consensus_repeat	Method
GATCTTCTCTCTCCACCTCTGAATCC	CRISPRCasFinder

1 spacers

cas3

The CRISPR arrays of NZ_CP010327_6

>merge|NZ_CP010327|6|2972175-2972248|CRISPRCasFinder
GATCTTCTCTCTCCACCTCTGAATCCTCCTTCAGATGATCTATTAGATGATCTTCTTTCACCACCTCTAAATCC

>NZ_CP010327|6|4|2972175-2972248|CRISPRCasFinder
GATCTTCTCTCTCCACCTCTGAATCC	TCCTTCAGATGATCTATTAGAT
GATCTTCTTTCACCACCTCTAAATCC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010327.1\|WP_006259049.1\|2983329_2983917_+\|dephospho-CoA-kinase	unknown	unknown	gnl\|CDD\|234620
NZ_CP010327.1\|WP_006259054.1\|2978991_2980188_-\|alanine-dehydrogenase	unknown	unknown	gnl\|CDD\|240630
NZ_CP010327.1\|WP_006259057.1\|2975255_2977358_-\|ATP-dependent-DNA-helicase-RecG	cas3	cd09639_cas3_CAS-I	gnl\|CDD\|236794
NZ_CP010327.1\|WP_006259052.1\|2980202_2980622_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	unknown	unknown	gnl\|CDD\|376771
NZ_CP010327.1\|WP_006259067.1\|2966906_2967692_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|179371
NZ_CP010327.1\|WP_006263454.1\|2969853_2971104_-\|dihydroorotase	unknown	unknown	gnl\|CDD\|236479
NZ_CP010327.1\|WP_006259051.1\|2980624_2982181_-\|PglZ-domain-containing-protein	unknown	unknown	gnl\|CDD\|333815
NZ_CP010327.1\|WP_006259050.1\|2982326_2983319_+\|glycosyltransferase	unknown	unknown	gnl\|CDD\|133016
NZ_CP010327.1\|WP_006259048.1\|2984061_2985570_+\|HAMP-domain-containing-histidine-kinase	unknown	unknown	gnl\|CDD\|223715
NZ_CP010327.1\|WP_006259063.1\|2969491_2969836_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006259056.1\|2977512_2977920_-\|DUF4377-domain-containing-protein	unknown	unknown	gnl\|CDD\|379548
NZ_CP010327.1\|WP_039329367.1\|2968832_2969489_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|223477
NZ_CP010327.1\|WP_006259055.1\|2978553_2978928_-\|DUF4258-domain-containing-protein	unknown	unknown	gnl\|CDD\|379454
NZ_CP010327.1\|WP_006261055.1\|2967706_2968201_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_006259061.1\|2971218_2971974_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|274948
NZ_CP010327.1\|WP_006263451.1\|2963970_2965236_+\|acetyl-CoA-hydrolase/transferase-family-protein	unknown	unknown	gnl\|CDD\|188463
NZ_CP010327.1\|WP_039329362.1\|2963443_2963842_+\|DUF3995-domain-containing-protein	unknown	unknown	gnl\|CDD\|372505
NZ_CP010327.1\|WP_006259068.1\|2965395_2966844_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010327.1\|WP_039329370.1\|2974662_2975241_-\|non-canonical-purine-NTP-diphosphatase	unknown	unknown	gnl\|CDD\|237823
NZ_CP010327.1\|WP_006259065.1\|2968228_2968771_+\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP010327.1\|WP_006259049.1\|2983329_2983917_+\|dephospho-CoA-kinase	gnl\|CDD\|234620	PRK00081, coaE, dephospho-CoA kinase; Reviewed.	4.28607e-59
NZ_CP010327.1\|WP_006259054.1\|2978991_2980188_-\|alanine-dehydrogenase	gnl\|CDD\|240630	cd05305, L-AlaDH, Alanine dehydrogenase NAD-binding and catalytic domains. Alanine dehydrogenase (L-AlaDH) catalyzes the NAD-dependent conversion of pyruvate to L-alanine via reductive amination. Like formate dehydrogenase and related enzymes, L-AlaDH is comprised of 2 domains connected by a long alpha helical stretch, each resembling a Rossmann fold NAD-binding domain. The NAD-binding domain is inserted within the linear sequence of the more divergent catalytic domain. Ligand binding and active site residues are found in the cleft between the subdomains. L-AlaDH is typically hexameric and is critical in carbon and nitrogen metabolism in micro-organisms.	4.7841e-168
NZ_CP010327.1\|WP_039329362.1\|2963443_2963842_+\|DUF3995-domain-containing-protein	gnl\|CDD\|372505	pfam13160, DUF3995, Protein of unknown function (DUF3995). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 138 and 149 amino acids in length. There are two completely conserved residues (W and P) that may be functionally important.	4.43392e-20
NZ_CP010327.1\|WP_006259052.1\|2980202_2980622_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE	gnl\|CDD\|376771	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE. This family of proteins is involved in the synthesis of threonylcarbamoyl adenosine (t(6)A).	5.00988e-49
NZ_CP010327.1\|WP_006259067.1\|2966906_2967692_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|179371	PRK02113, PRK02113, MBL fold metallo-hydrolase.	1.32172e-94
NZ_CP010327.1\|WP_006263454.1\|2969853_2971104_-\|dihydroorotase	gnl\|CDD\|236479	PRK09357, pyrC, dihydroorotase; Validated.	7.02326e-131
NZ_CP010327.1\|WP_006259048.1\|2984061_2985570_+\|HAMP-domain-containing-histidine-kinase	gnl\|CDD\|223715	COG0642, BaeS, Signal transduction histidine kinase [Signal transduction mechanisms].	1.56128e-47
NZ_CP010327.1\|WP_006259051.1\|2980624_2982181_-\|PglZ-domain-containing-protein	gnl\|CDD\|333815	pfam00072, Response_reg, Response regulator receiver domain. This domain receives the signal from the sensor partner in bacterial two-component systems. It is usually found N-terminal to a DNA binding effector domain.	1.41471e-28
NZ_CP010327.1\|WP_039329367.1\|2968832_2969489_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|223477	COG0400, COG0400, Predicted esterase [General function prediction only].	8.30101e-34
NZ_CP010327.1\|WP_039329370.1\|2974662_2975241_-\|non-canonical-purine-NTP-diphosphatase	gnl\|CDD\|237823	PRK14823, PRK14823, putative deoxyribonucleoside-triphosphatase; Provisional.	5.61127e-109
NZ_CP010327.1\|WP_006259056.1\|2977512_2977920_-\|DUF4377-domain-containing-protein	gnl\|CDD\|379548	pfam14302, DUF4377, Domain of unknown function (DUF4377). This domain family is found in bacteria and archaea, and is approximately 80 amino acids in length.	2.63333e-35
NZ_CP010327.1\|WP_006259061.1\|2971218_2971974_-\|hypothetical-protein	gnl\|CDD\|274948	TIGR04056, OMP_RagA_SusC, TonB-linked outer membrane protein, SusC/RagA family. This model describes a distinctive clade among the TonB-linked outer membrane proteins (OMP). Members of this family are restricted to the Bacteriodetes lineage (except for Gemmatimonas aurantiaca T-27 from the novel phylum Gemmatimonadetes) and occur in high copy numbers, with over 100 members from Bacteroides thetaiotaomicron VPI-5482 alone. Published descriptions of members of this family are available for RagA from Porphyromonas gingivalis, SusC from Bacteroides thetaiotaomicron, and OmpW from Bacteroides caccae. Members form pairs with members of the SusD/RagB family (pfam07980). Transporter complexes including these outer membrane proteins are likely to import large degradation products of proteins (e.g. RagA) or carbohydrates (e.g. SusC) as nutrients, rather than siderophores. [Transport and binding proteins, Unknown substrate].	3.62368e-07
NZ_CP010327.1\|WP_006263451.1\|2963970_2965236_+\|acetyl-CoA-hydrolase/transferase-family-protein	gnl\|CDD\|188463	TIGR03948, hypothetical_protein_FAEPRAM212_02812, butyryl-CoA:acetate CoA-transferase. This enzyme represents one of at least two mechanisms for reclaiming CoA from butyryl-CoA at the end of butyrate biosynthesis (an important process performed by some colonic bacteria), namely transfer of CoA to acetate. An alternate mechanism transfers the butyrate onto inorganic phosphate, after which butyrate kinase transfers the phosphate onto ADP, creating ATP. [Energy metabolism, Fermentation].	8.3052e-104
NZ_CP010327.1\|WP_006259057.1\|2975255_2977358_-\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP010327.1\|WP_006259050.1\|2982326_2983319_+\|glycosyltransferase	gnl\|CDD\|133016	cd02525, Succinoglycan_BP_ExoA, ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.	1.08375e-29
NZ_CP010327.1\|WP_006259055.1\|2978553_2978928_-\|DUF4258-domain-containing-protein	gnl\|CDD\|379454	pfam14076, DUF4258, Domain of unknown function (DUF4258). This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 95 and 124 amino acids in length.	8.79288e-05

>NZ_CP010327.1|WP_006259061.1|2971218_2971974_-|hypothetical-protein
MRNFTVFLFIILSVLTVAAQDRTSVKGTILNDKSFLPVDDVNVINISQVKGTISKRDGSFTVEANLNDSIHLSYPGYIPIKLKVTNDWLNNENLKIYFTENTIELDEILIKKFDLTGYLEVDTKLIELNEKMQFDFYRQNKTPYYGTAMGTFFSPVDAVYNLFKGKDKKLKKIEAIKEDQNMIALMQTRYDREIVCGLLEITREDIVKSLQNCNYTDKFIYTATDFQIYQALNDCYDNSKLLASKKKNASN
>NZ_CP010327.1|WP_006263454.1|2969853_2971104_-|dihydroorotase
MNIILKAAKVIDPTSPFHNQTVDIQVENGLITKIANQIENDQFEQIKYDNLHVSQGWFDSSVCLGEPGFEERENIAHGLEVAAKSGFTQIAVEPNTHPITDSQSIVSFIKQKAFGQTTEVFPIGALTVKSEGTDLAELFDMKNAGAIAFGDYKKPIQNANVLKIALQYVQDFDGLIIAFSQDNSIKGKGVANEGVESTKLGLKGIPTLAEELQIARNLFLLEYTGGKVHFPTISTAKSVELIKEAKSKGLNVTCSTAVHLLTMTDEKLADFDTRFKVYPPLRDEATRQALINGVLDGTIDCITSEHNPLDIEHKKLEFNSASNGTIGLESAFAALNTVLPLEVIVDKLTSARTIFKIDTPSIKEGNKVNITLFNPSKEYSFTKENILSKSKNSAFLNHPMNGEVYGVVNGDKKTLK
>NZ_CP010327.1|WP_006259063.1|2969491_2969836_-|hypothetical-protein
MLKTFNEKEIETGRTMAAIAHIFILGTLIAIFMNLEPKNRFSGFYIKQAFGLTLFFLALGSMASNFDTWLISAPFYFCFISLWTYSFIGAVTGEIKPLPKIGVYFQKWFDKLSA
>NZ_CP010327.1|WP_039329367.1|2968832_2969489_-|alpha/beta-fold-hydrolase
MDTSLSISYLIQEPKVIKDKNPVIILLHGYGSNEEDLFSFAPELPDDYYVISARAPYTVPPYGYAWYAITFDADANKFSDDNQAIESRDLIVRFIDELVAKYPIDANNVNLVGFSQGAILSYAIALSYPEKVNKVVALSGYFNENIIAKNYKENNLSKLRLFASHGTVDQVIPIDWARRTPTILTSLAVKHTYKEYPVGHGVHPLNFRDFKEFLLEEQ
>NZ_CP010327.1|WP_006259065.1|2968228_2968771_+|hypothetical-protein
MKKSISLFVILLLTMTSCDFILKDNKDDNEKGMVITDGSTEIVTLDEDDEVLGCAYSAGYRWSELENNCIRIFEIGFRLNPIGLEEDTTEDNALEDNSVSCFVTYAKDKKKAEIFLPNHKKGIVLELTKDKSAYINDGWELSNEGMVLKHKGETAFTAAKTIELKIINSDQPVEEDVHEE
>NZ_CP010327.1|WP_006261055.1|2967706_2968201_+|hypothetical-protein
MKHKAFFYLFLFSLVILVLLYANNKNMYKMEGKKIEIAHKRIDIVRDSLKEVTKDFNEANYFSIEYNEDAQEYFNYKTIDQSLTSIKEEVLALNHQDNGNPLVPYGVINGEKCVINKVKVLNHRWIIADFYAGAVHGEVLIKYFYTEGKPTEFKTIDTVMYATK
>NZ_CP010327.1|WP_006259067.1|2966906_2967692_+|MBL-fold-metallo-hydrolase
MWKIYVILEVYFLGTGTSQGIPIIGIDHPVAHSIDPRDKRLRTSVLVKWDEHTILIDCGPDFRQQMLTAGCSKLDAIFFTHEHADHIAGLDEIRPLTILHGSLPIYAQERVIKALERRYDYIFTKEDRYPGAPSVEEHSITSQDTIMIGKKTIIPIDVMHGPLPILGYRLGDLVYITDAKYITDEEVEKIKGCKVLIVNALRIKDHPTHFSLEESLAFIDKIKPEKAYLTHIAQDLGFHKDVENILPKDVYLAYDNLKITI
>NZ_CP010327.1|WP_006259068.1|2965395_2966844_-|hypothetical-protein
MKNFAEDLVLNGDRVIEHHPAISDKALKINLNNDIYGTFAEIGAGQETVRHFFRAGGSSRTVAKAMSAYDKVFSDAIYSVEEDGRYVTESRLIKMLDYETRKIEERLIREENPNKTFFSYANTVATIDYAKKNKGHGWVGIMFQTASNQAYNKIVLHIQFKETDSKLQQETLGILGVNLIYGAFYQHHDAKKLIHSLYDHLDKDQIEIDSINFSGPIFETVDNRLMSLQLVKNGMTDAVMFSPSGRSELAANILYKQNILALRGSFRPVTIVNMDMYQKSLDKFMTQNNLAKENTKVVFEITLSNLLAEGSLDEIDFLDRADLLCSLGQTVMISNFQEYYKLTEYFSKYTDQKIALAMGVSSLLNIFEEKYYTHLTGGILEGLGKLFRNTMKIYLYPMIGNEEQIVDSTNLKVDLHIKELYKFFKKNNQIIDIEDYEKDHLSIFSRDVLKLLQQNQNGWEDKLPEGISKIIQEKELFGYKRK
>NZ_CP010327.1|WP_006263451.1|2963970_2965236_+|acetyl-CoA-hydrolase/transferase-family-protein
MKYVSASEAAKVVKSGDRIYVHAAAATPNILTKAISDRAEELRNVEFCHIHTEGAAPYADPALSESFHVNSFFIGKNVRHTIAAGNGSYTPVFLSEVPNLFRKGALKVDVVLIQVSPPDEHGFCSLGTSVEATVAAMECAKVVIAQVNKYMPRTFGDSVLHISKIDMAVEHHTAIYAQKQAVITDTEALIGDHVAALIEDESTLQMGIGSIPNAVLSRLTNHKNLGLHTEMFSDGVIDLIESGVIDCSKKTIAKGRALATFLIGSERLYKFVDNNPFIVMKESSYVNDTAIIRQNPKVVAINSALEVDLTGQICADSLGVHMYSGVGGQMDFVRGASLSKGGKAIIALSSTSNKGHNRIVPFLKQGAGVVTTRAHAQYIVTEYGVADLYGKTLKQRVTAMVEIAHPDFREEILKTYHDSIK
>NZ_CP010327.1|WP_039329362.1|2963443_2963842_+|DUF3995-domain-containing-protein
MSLEITIKIVNTLIFSFLSGIHIYWAFGGKWGSVGVLPTKDGERKLNPSPVGTLLVASGLAVFAGVSLGDVSAYKWVYLVMGVLFGLRVIGDFNYVGVFKKVKNSVFAKKDTTIFIPLCFYLSLSNIFLYMS
>NZ_CP010327.1|WP_039329370.1|2974662_2975241_-|non-canonical-purine-NTP-diphosphatase
MKLVFASNNKNKIKEIRNQLPDTIEILSLEDIGCNIDIPETADTIEGNAKLKADFVKRHYGYDCFADDSGLEVDALNGAPGVYSARYAGEQKNDNDNIDKLLEVLQKEDNRKANFKTVICLNLHTETYYFTGIIDGQLLRERQGTEGFGYDPIFVADGMNQSFAEIDINAKNAISHRGKAVRQLVDFLSKKS
>NZ_CP010327.1|WP_006259057.1|2975255_2977358_-|ATP-dependent-DNA-helicase-RecG
MSKNLLDTPIEYLKGVGPQRADLFKRELGIFTYRDLLHLYPNRYIDRTQYYKINELYNNNSEVQIVGKIIHIKTVEQKRGKRLVATFTDGTGQIELVWFQGYKWIQENLKLNTPYVAFGKLNSFNNTFSMPHPELDLLEEHQKNIANAMQAVYPSTEKFGARISNKSIIKMMMQLVKETHPLFIDTLSDEFKRKLNLISMQEALINIHFPKNMDMLNKAQFRLKFEELFYVQLQLLIKNIARKDKIKGYPFEKVGDYFNTFYSEHLPFPLTGAQKRVLKEIRNDVGAPAQMNRLLQGDVGSGKTIVAFMSCLLALDNGFQACIVAPTEILATQHYVGIKELGEPLGLKIKLLTGSTKTAERRVLHEELASGELHILIGTHALFEDKVIFKNLGLAIIDEQHRFGVEQRSKLWHKNELPPHVLVMTATPIPRTLAMSLYGDLDISVIDELPPGRKPIQTNHYFEGKRLAVWHFLKTEIAKGRQVYIVYPLIDESETLDYKNLMEGYEAISRDFPLPEYSVSIVHGQMTPAEKDREMDRFIKGETNIMVATTVIEVGVNVPNASVMIIESAERFGLSQLHQLRGRVGRGAEQSYCILMTGDKLSNDSKIRMETMCRTNDGFEISEVDLKLRGPGDIMGTQQSGTLPLKIADIVKDQEIMLYARHHAVQLLKEDPTLEEPENQRIKNKLNILNSKTTIWNYIS
>NZ_CP010327.1|WP_006259056.1|2977512_2977920_-|DUF4377-domain-containing-protein
MKKILLLAAVVGLSFTSCKKDGESGTTAPAVEPTEQTTTPIESTEATPKEELGNVTYTIASKLVDCTGVAPMKCMQYKEEGSDEWLNMYGGIEGFNYEEGYEYVIEVKREKVENPPADASSIKYILVKEISKTKK
>NZ_CP010327.1|WP_006259055.1|2978553_2978928_-|DUF4258-domain-containing-protein
MKFTQRLAYYLFGLLIGGMFLFYFFGEKKTEFCYLPNCRVLKDLRSKPVTYSKTVEAKFKEGWVSNDDIRKSLQYGDVNFSESNIDFEKGKLYVIIGRNEQNENILIKVINYTDKIVLYDIEKM
>NZ_CP010327.1|WP_006259054.1|2978991_2980188_-|alanine-dehydrogenase
MATLTPFSMKDLIPQEECLMVERKKSELFIGVPKENTLIEKRICITPEAVQTLSTYGHRVLIEKGAGEAANYSDLDYSKAGAELTSDTKKIFSCPVIVKVAPPTLEEVKLMAPYTVVWSTIQLKTLTRQYFETLSKKKISAIGFDFIHDENGTYPAVSALSEIAGTASILIASELMTTTNNGKGLLFGNIAGVVPTEVVILGAGLVAENAARTAIGMGANVRVFDNSIQKLRRLQNNLSQRISTSTIQEKILHKALMRCDVAIGAIRGKNRAPIVVSESMVDNMKNGAVIIDVSIDTGGCFETSELTTHDHPTIIKSGVIHYGVPNITSRYSRTASMALSNIITPLLLEYTDCGDLDGTVNCESVIKSGIYSYKGLVTNRNVAEWFNLDYKDIHLFTF
>NZ_CP010327.1|WP_006259052.1|2980202_2980622_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-ATPase-subunit-type-1-TsaE
MTEIVFSLNQIQEVATDILSKLKHRIVLFDAQMGAGKTTLIKEISKQLGVEDMTSSPTFSIVNEYHSTTSKDRVYHFDLYRLNSEEEAYDMGMDEYLDSNHWCFIEWPEKTPHIIPDEHATIEISILENGDRKLILNNN
>NZ_CP010327.1|WP_006259051.1|2980624_2982181_-|PglZ-domain-containing-protein
MNKIHILWVDDEVDLLKPHILFLEKKDYIVTTCTNGQDAIDLFKENQYDIVFLDENMPGLSGLETLNEIKTIKSNTPIIMITKSEEEYIMEEAIGAKISDYLIKPVNPNQILLSLKKNLDDSRLISEKSSLSYQKEFRNISMDLMQARDYEDWISIYRKLLYWEQKLENIEDQNLFNILDSQKTEANSLFGKFVEKNYESWINDPEDSPVFSHQIFRKWVAPELKKEDSKLLFIVIDNLRYDQWRAFEAIVTNHYKVESENSFFSILPTATQYARNAIFSGMTPLEMSEQLPQYWKNDTDEGGKNLFENEFLQHQLQRLRLNIKNEYHKITNLKEGRKLADNFKALKDNKLITIVYNFVDMLSHAKTEMEVIKELASNDKAYRSLTVSWFRNSPLFEIIQQAQALGYKLIITTDHGTINCKNPSKVIGDKNTSLNLRYKTGKSLTFEAKDVYHVKDPKKVQLPNINVSSSFIFAKNDFFLAYQNNFNYYAAYFRNTYQHGGISLEEMIVPFIVLNPKV
>NZ_CP010327.1|WP_006259050.1|2982326_2983319_+|glycosyltransferase
MYFSFIIPVYNRPDEVDELLESLTKQTYKEAFEVVIVEDGSKEDSRAVVSKYEDRLEISYYYKANSGPGASRNYGMERAKGEYFIVLDSDCIIPQEYLTTVDQYLKEEYVDCFGGPDAALASFSDVQKAINYSMTSVLTTGGIRGASERIGKFQPRSFNMGISKKAFLASGGFGKIHPGEDPDLTIRLWKLGFDTQLFSKAYVYHKRRIDWNKFFIQVNKFGKARPILNQRYPETSKITYWFPALFMAGLLLSIIMTYYTFVFILCYIFYFMFVFLGCLIKEKNFKISLLALVAIFIQFYGYGIGFVKSSYILFVKRQEAEVGMPEMFFK
>NZ_CP010327.1|WP_006259049.1|2983329_2983917_+|dephospho-CoA-kinase
MALIVGLTGGIGSGKTTVANMFAEEGIPIYIADERAKQIMDRADVVEAVQSIFKENVKIGEVLDRKKIREIVFDNKELLNQLNQIVHPEVKKDFERWKEENDAFPFVIKESAVLFENNLNKQCDLVILVTAPEEVRLARVMARDGVSLDNVESIMRNQLKDSDKIPFSDYVITNINKDLVKKEVKMIINDIIIKI
>NZ_CP010327.1|WP_006259048.1|2984061_2985570_+|HAMP-domain-containing-histidine-kinase
MYWIVSSYRNNEEQFKYHVQQVLGNVGSGLQQNEATEFYRMYNQLKDSIGTPPKQSELKQYYIVERNPTTNEQIVYSNILVLEDYNIKSSFFDKKADSLKVKNFVSKRKTEIYKGDDLDRSSLKQNYPDEVIEQSGNLDILDKAQFDIYFKDIVALRSIDERISKAKLRELLEKELKQYGVNAKFEFGIYNKGLSTKIKSEDFIYEEGSTYGVPIFTDNENRSKYQLYITFPEKSKYLFSSLIGITLLSILFTMVIIAAYLNAINQLIKQKQISEIKTDFINNMTHEFKTPIATINLALDAIKNPKVINDPEKVDRYLKMIRDENKRMHAQVENVLQISKLERREFNVDKEAMDVHEVIENAVDHVGLIIQDRGGEINLNLDARRSDVLGNDFHFTSVIVNILDNAIKYSKDVPIIDVYTENVKDFILIKIQDHGVGMSKQAQKRIFDKFYREHTGDLHNVKGHGLGLAYVQQIVEVHNSQVYVESEKGKGSTFIIKMPLIN

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1055766 : 1065508

Bacillus_phage(16.67%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_006259878.1\|1055766_1058913_-	UvrD-helicase domain-containing protein	A7KV33	Bacillus_phage	2.3e-08	21.3
WP_006259879.1\|1059024_1059630_+	superoxide dismutase	Q56AR7	Bacillus_thuringiensis_phage	4.5e-62	58.5
WP_006259880.1\|1059794_1061225_-	pyruvate kinase	NA	NA	NA	NA
WP_006259881.1\|1061229_1061718_-	IPExxxVDY family protein	NA	NA	NA	NA
WP_006259882.1\|1061815_1062562_-	ribonuclease III	M1HR51	Paramecium_bursaria_Chlorella_virus	2.9e-18	32.9
WP_006259883.1\|1062577_1063900_-	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_002988156.1\|1064032_1064269_-	acyl carrier protein	B2ZXV3	Ralstonia_phage	1.8e-06	38.1
WP_006259885.1\|1064465_1065026_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	2.8e-18	33.1
WP_006259886.1\|1065034_1065508_+	ribonuclease HI	A0A2I7QI15	Vibrio_phage	3.1e-26	45.0

DBSCAN-SWA_2

3938833 : 3972537

Leptospira_phage(42.86%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039329170.1\|3938833_3940408_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.8e-63	34.1
WP_016649257.1\|3940457_3940742_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_006258245.1\|3940795_3941083_-	hypothetical protein	NA	NA	NA	NA
WP_039330128.1\|3941227_3941716_-	proteinase inhibitor	NA	NA	NA	NA
WP_006258385.1\|3941958_3942393_-	adenylyltransferase/cytidyltransferase family protein	A0A218MN49	uncultured_virus	1.7e-39	57.1
WP_039330129.1\|3943300_3944758_+	hypothetical protein	NA	NA	NA	NA
WP_039330130.1\|3944802_3945684_-	PepSY-like domain-containing protein	NA	NA	NA	NA
WP_006258389.1\|3945704_3946154_-	PepSY-like domain-containing protein	NA	NA	NA	NA
WP_039330131.1\|3946306_3947599_-	HAMP domain-containing histidine kinase	NA	NA	NA	NA
WP_039330133.1\|3947602_3948280_-	response regulator transcription factor	NA	NA	NA	NA
WP_039330134.1\|3948452_3948932_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_006261643.1\|3949505_3949967_-	META domain-containing protein	NA	NA	NA	NA
WP_006258395.1\|3950168_3951785_-	ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	8.3e-47	27.1
WP_039330135.1\|3951957_3953367_+	hypothetical protein	NA	NA	NA	NA
WP_039330137.1\|3954232_3954712_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_039330139.1\|3955586_3957638_+	tetratricopeptide repeat-containing sensor histidine kinase	NA	NA	NA	NA
WP_039330141.1\|3957766_3957991_-	hypothetical protein	NA	NA	NA	NA
WP_006264127.1\|3958142_3958787_+	response regulator transcription factor	NA	NA	NA	NA
WP_039330145.1\|3959377_3960271_-\|transposase	IS1595-like element ISMyr1 family transposase	NA	NA	NA	NA
WP_006258245.1\|3960516_3960804_+	hypothetical protein	NA	NA	NA	NA
WP_016649257.1\|3960857_3961142_+	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_052237556.1\|3961191_3962790_+\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.8e-63	34.1
WP_039328002.1\|3964586_3965567_+\|transposase	IS30 family transposase	Q9MBM9	Staphylococcus_prophage	6.8e-36	33.3
WP_052237557.1\|3965563_3966448_+	hypothetical protein	NA	NA	NA	NA
WP_039330147.1\|3968639_3968828_+	hypothetical protein	NA	NA	NA	NA
WP_039329170.1\|3968828_3970403_-\|transposase	IS66 family transposase	S5VTD3	Leptospira_phage	2.8e-63	34.1
WP_016649257.1\|3970452_3970737_-	IS66 family insertion sequence element accessory protein TnpB	NA	NA	NA	NA
WP_006258245.1\|3970790_3971078_-	hypothetical protein	NA	NA	NA	NA
WP_006261444.1\|3972123_3972537_-\|transposase	IS200/IS605 family transposase	A0A1P8BMC0	Lactococcus_phage	1.5e-13	32.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP010327

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection