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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP014328 Halocynthiibacter arcticus strain PAMC 20958 plasmid unnamed, complete sequence 0 crisprs WYL 0 0 4 0
NZ_CP014327 Halocynthiibacter arcticus strain PAMC 20958 chromosome, complete genome 1 crisprs csa3,DEDDh,WYL,cas3,cas5,cas8c,cas7,cas4,cas1,RT 0 7 9 0

Results visualization

1. NZ_CP014328
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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2556 2 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_2 12015 : 14467 3 Shigella_phage(50.0%) transposase NA
DBSCAN-SWA_3 24039 : 32764 7 Halorubrum_phage(33.33%) transposase NA
DBSCAN-SWA_4 45158 : 46310 1 Staphylococcus_phage(100.0%) transposase NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage
2. NZ_CP014327
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP014327_1 2479656-2481395 TypeI I-C
26 spacers
cas1,cas4,cas7,cas8c,cas5,cas3

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Click the colored protein region to show detailed information
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 KX349284 Synechococcus phage S-RIM2 isolate W2_39_0910, complete genome 58828-58860 6 0.818
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 KX349231 Synechococcus phage S-RIM2 isolate LIS_06_1010, complete genome 58932-58964 6 0.818
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 KX349274 Synechococcus phage S-RIM2 isolate W1_03_0709, complete genome 59146-59178 6 0.818
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 KX349277 Synechococcus phage S-RIM2 isolate W1_12_0909, complete genome 58804-58836 6 0.818
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 KJ019064 Synechococcus phage ACG-2014c isolate Syn7803C98, complete genome 8037-8069 6 0.818
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 KF156339 Synechococcus phage S-MbCM25, complete genome 8037-8069 6 0.818
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_019444 Synechococcus phage S-MbCM6, complete genome 8038-8070 6 0.818
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP054616 Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence 285260-285292 6 0.818
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009695 Bacillus anthracis strain RA3 plasmid pXO2, complete sequence 62206-62238 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009542 Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence 87767-87799 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP010320 Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 2, complete sequence 58943-58975 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009326 Bacillus anthracis strain Vollum 1B plasmid 2, complete sequence 87736-87768 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009979 Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed2, complete sequence 31910-31942 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_KU525621 Bacillus anthracis strain P.NO2 plasmid pXO2, complete sequence 41353-41385 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_014332 Bacillus cereus biovar anthracis str. CI plasmid pCI-XO2, complete sequence 42090-42122 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_012577 Bacillus anthracis str. CDC 684 plasmid pX02, complete sequence 39996-40028 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP015778 Bacillus anthracis strain Tangail-1 plasmid pXO2, complete sequence 41568-41600 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP018905 Bacillus anthracis strain Tyrol 4675 plasmid pXO2, complete sequence 41922-41954 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP023003 Bacillus anthracis strain 14RA5914 plasmid pX02, complete sequence 71777-71809 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_AP019733 Bacillus anthracis strain PCr plasmid PCr-pXO2 77574-77606 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_AP018445 Bacillus anthracis strain CZC5 plasmid pXO2, complete sequence 41573-41605 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP029325 Bacillus anthracis strain 17OD930 plasmid pXO2, complete sequence 29867-29899 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_012655 Bacillus anthracis str. A0248 plasmid pXO2, complete sequence 42611-42643 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_007323 Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence 41568-41600 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP010854 Bacillus anthracis strain A1144 plasmid pXO2, complete sequence 41736-41768 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP007617 Bacillus anthracis strain 2000031021 plasmid pXO2, complete sequence 17117-17149 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP008848 Bacillus anthracis strain HYU01 plasmid pX02, complete sequence 41501-41533 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP006744 Bacillus anthracis str. SVA11 plasmid pXO2, complete sequence 41533-41565 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_AP014835 Bacillus anthracis strain Shikan-NIID plasmid pXO2 41565-41597 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP029807 Bacillus anthracis strain London_499 plasmid pX02, complete sequence 41566-41598 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_002146 Bacillus anthracis plasmid pXO2, complete sequence 42066-42098 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_017727 Bacillus anthracis str. H9401 plasmid BAP2, complete sequence 41576-41608 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009314 Bacillus anthracis str. Turkey32 strain 35 plasmid unnamed, complete sequence 48423-48455 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP014178 Bacillus anthracis strain Stendal plasmid pXO2, complete sequence 41568-41600 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009475 Bacillus anthracis strain Pasteur plasmid pXO2, complete sequence 64082-64114 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009900 Bacillus anthracis strain 2002013094 plasmid pXO2, complete sequence 26574-26606 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009339 Bacillus anthracis strain Ohio ACB plasmid 2, complete sequence 60858-60890 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009462 Bacillus anthracis strain SK-102 plasmid pXO2, complete sequence 69169-69201 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009698 Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence 38781-38813 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP009329 Bacillus anthracis strain K3 plasmid 2, complete sequence 75849-75881 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP001972 Bacillus anthracis str. A16 plasmid pXO2, complete sequence 41566-41598 7 0.788
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP047133 Bacillus anthracis str. BF1 plasmid pXO2, complete sequence 41509-41541 7 0.788
NZ_CP014327_1 1.7|2480082|32|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2480082-2480113 32 NZ_CP046573 Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence 103794-103825 8 0.75
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP020084 Blastomonas fulva strain T2 plasmid unnamed, complete sequence 131941-131973 8 0.758
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_016623 Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence 485027-485059 8 0.758
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 MN693539 Marine virus AFVG_25M73, complete genome 31220-31252 8 0.758
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 MT276994 Aeromonas phage AhyVDH1, complete genome 12797-12829 8 0.758
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NC_017958 Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence 736746-736778 8 0.758
NZ_CP014327_1 1.7|2480082|32|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2480082-2480113 32 NZ_CP046573 Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence 734220-734251 9 0.719
NZ_CP014327_1 1.7|2480082|32|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2480082-2480113 32 NZ_CP046574 Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence 108174-108205 9 0.719
NZ_CP014327_1 1.21|2481002|34|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481002-2481035 34 NC_015727 Cupriavidus necator N-1 plasmid pBB1, complete sequence 526260-526293 9 0.735
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP029831 Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence 364262-364294 9 0.727
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 MN693299 Marine virus AFVG_25M439, complete genome 20504-20536 9 0.727
NZ_CP014327_1 1.25|2481266|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481266-2481298 33 NZ_CP035000 Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence 387020-387052 9 0.727
NZ_CP014327_1 1.3|2479820|34|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2479820-2479853 34 MN693327 Marine virus AFVG_25M484, complete genome 17387-17420 10 0.706
NZ_CP014327_1 1.13|2480475|34|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2480475-2480508 34 LR134125 Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5 419621-419654 10 0.706
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_CP030074 Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence 709400-709432 10 0.697
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 MN694113 Marine virus AFVG_250M153, complete genome 2028-2060 10 0.697
NZ_CP014327_1 1.8|2480146|34|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2480146-2480179 34 NC_020548 Azoarcus sp. KH32C plasmid pAZKH, complete sequence 378625-378658 11 0.676
NZ_CP014327_1 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR 2481068-2481100 33 NZ_AP014579 Burkholderia sp. RPE67 plasmid p1, complete sequence 95665-95697 12 0.636

1. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to KX349284 (Synechococcus phage S-RIM2 isolate W2_39_0910, complete genome) position: , mismatch: 6, identity: 0.818

acgt-ttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
-tgtatcgattgttggcggtggcggtgctggtgc	Protospacer
 .** *.* *** ** ******************

2. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to KX349231 (Synechococcus phage S-RIM2 isolate LIS_06_1010, complete genome) position: , mismatch: 6, identity: 0.818

acgt-ttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
-tgtatcgattgttggcggtggcggtgctggtgc	Protospacer
 .** *.* *** ** ******************

3. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to KX349274 (Synechococcus phage S-RIM2 isolate W1_03_0709, complete genome) position: , mismatch: 6, identity: 0.818

acgt-ttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
-tgtatcgattgttggcggtggcggtgctggtgc	Protospacer
 .** *.* *** ** ******************

4. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to KX349277 (Synechococcus phage S-RIM2 isolate W1_12_0909, complete genome) position: , mismatch: 6, identity: 0.818

acgt-ttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
-tgtatcgattgttggcggtggcggtgctggtgc	Protospacer
 .** *.* *** ** ******************

5. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to KJ019064 (Synechococcus phage ACG-2014c isolate Syn7803C98, complete genome) position: , mismatch: 6, identity: 0.818

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
aggatttgttggtggcggtggcggtggtggtgc	Protospacer
* * **  ****** *********** ******

6. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to KF156339 (Synechococcus phage S-MbCM25, complete genome) position: , mismatch: 6, identity: 0.818

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
aggatttgttggtggcggtggcggtggtggtgc	Protospacer
* * **  ****** *********** ******

7. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_019444 (Synechococcus phage S-MbCM6, complete genome) position: , mismatch: 6, identity: 0.818

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
aggatttgttggtggcggtggcggtggtggtgc	Protospacer
* * **  ****** *********** ******

8. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP054616 (Azospirillum oryzae strain KACC 14407 plasmid unnamed2, complete sequence) position: , mismatch: 6, identity: 0.818

acgtttgct--tggtgtcggtggcggtgctggtgc	CRISPR spacer
--ggctgctgctggtgacggtggcggtgctggcgc	Protospacer
  * .****  ***** ***************.**

9. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009695 (Bacillus anthracis strain RA3 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

10. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009542 (Bacillus anthracis strain BA1015 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

11. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010320 (Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

12. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009326 (Bacillus anthracis strain Vollum 1B plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

13. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009979 (Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

14. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_KU525621 (Bacillus anthracis strain P.NO2 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

15. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_014332 (Bacillus cereus biovar anthracis str. CI plasmid pCI-XO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

16. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_012577 (Bacillus anthracis str. CDC 684 plasmid pX02, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

17. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP015778 (Bacillus anthracis strain Tangail-1 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

18. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP018905 (Bacillus anthracis strain Tyrol 4675 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

19. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP023003 (Bacillus anthracis strain 14RA5914 plasmid pX02, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

20. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP019733 (Bacillus anthracis strain PCr plasmid PCr-pXO2) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

21. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP018445 (Bacillus anthracis strain CZC5 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

22. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029325 (Bacillus anthracis strain 17OD930 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

23. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_012655 (Bacillus anthracis str. A0248 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

24. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_007323 (Bacillus anthracis str. 'Ames Ancestor' plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

25. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP010854 (Bacillus anthracis strain A1144 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

26. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP007617 (Bacillus anthracis strain 2000031021 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

27. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP008848 (Bacillus anthracis strain HYU01 plasmid pX02, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

28. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP006744 (Bacillus anthracis str. SVA11 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

29. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014835 (Bacillus anthracis strain Shikan-NIID plasmid pXO2) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

30. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029807 (Bacillus anthracis strain London_499 plasmid pX02, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

31. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_002146 (Bacillus anthracis plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

32. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_017727 (Bacillus anthracis str. H9401 plasmid BAP2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

33. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009314 (Bacillus anthracis str. Turkey32 strain 35 plasmid unnamed, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

34. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP014178 (Bacillus anthracis strain Stendal plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

35. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009475 (Bacillus anthracis strain Pasteur plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

36. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009900 (Bacillus anthracis strain 2002013094 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

37. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009339 (Bacillus anthracis strain Ohio ACB plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

38. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009462 (Bacillus anthracis strain SK-102 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

39. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009698 (Bacillus anthracis strain BA1035 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

40. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP009329 (Bacillus anthracis strain K3 plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

41. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP001972 (Bacillus anthracis str. A16 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

42. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP047133 (Bacillus anthracis str. BF1 plasmid pXO2, complete sequence) position: , mismatch: 7, identity: 0.788

acgtttgc-ttggtgtcggtggcggtgctggtgc	CRISPR spacer
-agttcgtgatgttgtcggtggccgtgctggtgc	Protospacer
  ***.*.  ** ********** **********

43. spacer 1.7|2480082|32|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 8, identity: 0.75

tcagcaacggcgggcggctatcaagcgtttat	CRISPR spacer
ggcgcaacggcgggcggcgatcgagcgtctcg	Protospacer
   *************** ***.*****.*  

44. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP020084 (Blastomonas fulva strain T2 plasmid unnamed, complete sequence) position: , mismatch: 8, identity: 0.758

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
tggcggggctggtgtcggtggcgatgctggtgc	Protospacer
  *.  * .**************.*********

45. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_016623 (Azospirillum lipoferum 4B plasmid AZO_p3, complete sequence) position: , mismatch: 8, identity: 0.758

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
agggcagggtggtgacggtggcgatgctggtgc	Protospacer
* * . *  ***** ********.*********

46. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to MN693539 (Marine virus AFVG_25M73, complete genome) position: , mismatch: 8, identity: 0.758

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
tcgcggtcctggtggtggtggcggtgctggtgc	Protospacer
 **.   *.***** .*****************

47. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to MT276994 (Aeromonas phage AhyVDH1, complete genome) position: , mismatch: 8, identity: 0.758

acgtt-tgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
-catcaagcttggagccggtggcggtgctggggt	Protospacer
 *.*.  ****** *.*************** *.

48. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_017958 (Tistrella mobilis KA081020-065 plasmid pTM3, complete sequence) position: , mismatch: 8, identity: 0.758

--acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
cggggctgg--tggtgtcggtgtcgctgctggtgc	Protospacer
  . *.* *  *********** ** *********

49. spacer 1.7|2480082|32|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046573 (Rhodococcus sp. WAY2 plasmid pRWAY01, complete sequence) position: , mismatch: 9, identity: 0.719

tcagcaacggcgggcggctatcaagcgtttat	CRISPR spacer
ggcgcaacggcgggcggcgatcgagcgcctcg	Protospacer
   *************** ***.****..*  

50. spacer 1.7|2480082|32|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP046574 (Rhodococcus sp. WAY2 plasmid pRWAY02, complete sequence) position: , mismatch: 9, identity: 0.719

tcagcaacggcgggcggctatcaagcgtttat	CRISPR spacer
ggcgcaacggcgggcggcgatcgagcgcctcg	Protospacer
   *************** ***.****..*  

51. spacer 1.21|2481002|34|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_015727 (Cupriavidus necator N-1 plasmid pBB1, complete sequence) position: , mismatch: 9, identity: 0.735

aaccaaaagacggcgcttgcaaccgaacgcacga	CRISPR spacer
atcgtgacatcggcgcttgcaaccgagcgcatga	Protospacer
* *  .* . ****************.****.**

52. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP029831 (Azospirillum ramasamyi strain M2T2B2 plasmid unnamed7, complete sequence) position: , mismatch: 9, identity: 0.727

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
gggggcgggtggtgacggtggcgatgctggtgc	Protospacer
. *  .*  ***** ********.*********

53. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to MN693299 (Marine virus AFVG_25M439, complete genome) position: , mismatch: 9, identity: 0.727

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
aagaactattggtggcggtggaggtgctggtgg	Protospacer
* *  .  ****** ****** ********** 

54. spacer 1.25|2481266|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP035000 (Rhizobium acidisoli strain FH23 plasmid pRapFH23b, complete sequence) position: , mismatch: 9, identity: 0.727

cggcactcgcggtcgggcggtgatgcgctcgtc	CRISPR spacer
aagcggccgcggtcgggcgttgatgcgatcgat	Protospacer
 .**. .************ ******* *** .

55. spacer 1.3|2479820|34|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to MN693327 (Marine virus AFVG_25M484, complete genome) position: , mismatch: 10, identity: 0.706

cgttgcacggcattgcagttgtcgaaagcacggc	CRISPR spacer
atcagcacggcgttggagttgtcgaaagcatcaa	Protospacer
  . *******.*** **************. . 

56. spacer 1.13|2480475|34|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to LR134125 (Klebsiella aerogenes strain NCTC10006 genome assembly, plasmid: 5) position: , mismatch: 10, identity: 0.706

acccttggatatgatcaagtccatcgccccgcac	CRISPR spacer
gcgtcgaatcatgatcaactccatcgccccgcac	Protospacer
.* .. .. .******** ***************

57. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP030074 (Streptomyces sp. ZFG47 plasmid unnamed1, complete sequence) position: , mismatch: 10, identity: 0.697

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
gggagatctcggtgtcgatggcggtgctggtca	Protospacer
. *    **.*******.*************  

58. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to MN694113 (Marine virus AFVG_250M153, complete genome) position: , mismatch: 10, identity: 0.697

acgtttgcttggtgtcggtggcggtgctggtgc	CRISPR spacer
tgtctcatctggtgtcggtgttggtgctggtgc	Protospacer
   .*....*********** .***********

59. spacer 1.8|2480146|34|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NC_020548 (Azoarcus sp. KH32C plasmid pAZKH, complete sequence) position: , mismatch: 11, identity: 0.676

acatgcttcaactcggcgtaggtgatgccactat	CRISPR spacer
cgttgcatcaactcggcataggtgatgatccgcg	Protospacer
   *** **********.********* . *   

60. spacer 1.22|2481068|33|NZ_CP014327|CRISPRCasFinder,CRT,PILER-CR matches to NZ_AP014579 (Burkholderia sp. RPE67 plasmid p1, complete sequence) position: , mismatch: 12, identity: 0.636

acgtttgcttggtgtcggtggcggtgctggtgc------	CRISPR spacer
------ggtaggtattggtgccggtgccggtgctggtgc	Protospacer
      * * ***.*.**** ******.*****      

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 340786 : 402763 53 Bacillus_virus(18.18%) transposase,integrase attL 371401:371449|attR 400172:400220
DBSCAN-SWA_2 983739 : 1018721 34 uncultured_Caudovirales_phage(25.0%) plate,transposase NA
DBSCAN-SWA_3 2176232 : 2223964 41 Ralstonia_phage(16.67%) terminase,transposase,integrase attL 2171387:2171401|attR 2183213:2183227
DBSCAN-SWA_4 2375390 : 2422779 41 Staphylococcus_phage(14.29%) terminase,transposase,integrase attL 2389048:2389107|attR 2421111:2421172
DBSCAN-SWA_5 2432327 : 2469131 30 Acidithiobacillus_phage(37.5%) terminase,tail,transposase NA
DBSCAN-SWA_6 3136253 : 3147004 7 Enterobacteria_phage(50.0%) NA NA
DBSCAN-SWA_7 3551357 : 3603866 39 Enterobacteria_phage(42.86%) transposase,integrase attL 3567571:3567592|attR 3601575:3601596
DBSCAN-SWA_8 3868070 : 3904206 33 Tetraselmis_virus(20.0%) transposase,integrase attL 3862922:3862936|attR 3914556:3914570
DBSCAN-SWA_9 4145705 : 4215238 59 Planktothrix_phage(22.22%) transposase,integrase attL 4184313:4184372|attR 4211415:4211516
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage