CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Target MGE spacer number	Prophage number
NZ_CP010373	Escherichia coli strain 6409 plasmid p6409-202.186kb, complete sequence	0 crisprs	csa3,DEDDh	0	2
NZ_CP010372	Escherichia coli strain 6409 plasmid p6409-151.583kb, complete sequence	0 crisprs	csa3	0	1
NZ_CP010371	Escherichia coli strain 6409 chromosome, complete genome	6 crisprs	DinG,cas3,c2c9_V-U4,DEDDh,csa3,cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,PD-DExK,RT	9	10

Results visualization

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CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

88959 : 120428

Bluetongue_virus(16.67%)

transposase,integrase

attL 114164:114177|attR 120837:120850

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001352368.1\|88959_90168_+\|transposase	IS4-like element ISVsa5 family transposase	A0A0F7LAS3	uncultured_marine_virus	1.8e-235	100.0
WP_000599533.1\|90533_91739_-	sodium/glutamate symporter	NA	NA	NA	NA
WP_000562370.1\|92182_92503_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_040110405.1\|92495_92867_+	amino acid-binding protein	NA	NA	NA	NA
WP_001206290.1\|92969_94178_+\|transposase	IS4-like element IS10A family transposase	Q9E8P4	Bluetongue_virus	3.1e-171	71.4
WP_001284954.1\|94226_94913_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000088605.1\|94890_95514_-	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_001089068.1\|95595_96801_+	tetracycline efflux MFS transporter Tet(B)	NA	NA	NA	NA
WP_000428546.1\|96913_97507_-	tetracyline resistance-associated transcriptional repressor TetC	NA	NA	NA	NA
WP_035689358.1\|97639_98011_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001339197.1\|98020_99229_-\|transposase	IS4-like element ISVsa5 family transposase	Q9E8P4	Bluetongue_virus	3.0e-235	100.0
WP_000464631.1\|99717_100335_-	hypothetical protein	NA	NA	NA	NA
WP_000362482.1\|100428_100647_-	hypothetical protein	NA	NA	NA	NA
WP_000268551.1\|100852_101509_-	hypothetical protein	NA	NA	NA	NA
WP_000936896.1\|101508_102936_-	DNA cytosine methyltransferase	NA	NA	NA	NA
WP_000647189.1\|102939_103440_-	hypothetical protein	I3UMJ0	Colwellia_phage	1.7e-19	43.3
WP_002210541.1\|103448_103760_-	hypothetical protein	NA	NA	NA	NA
WP_005507681.1\|103765_104197_-	hypothetical protein	NA	NA	NA	NA
WP_000344151.1\|104264_104939_-	thymidylate kinase	NA	NA	NA	NA
WP_000044824.1\|104913_105195_-	hypothetical protein	NA	NA	NA	NA
WP_001125905.1\|105187_105565_-	hypothetical protein	A0A2H4P7P5	Pseudomonas_phage	2.2e-22	49.6
WP_000939033.1\|105883_106027_+	hypothetical protein	NA	NA	NA	NA
WP_000074431.1\|106118_106754_+	N-6 DNA methylase	NA	NA	NA	NA
WP_000703827.1\|106806_107079_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_001207227.1\|107127_108309_-	ParB/RepB/Spo0J family partition protein	I3NLC2	Bifidobacterium_phage	2.4e-11	28.7
WP_001151304.1\|108312_109098_-	ParA family protein	A0A1X9IGI7	Lactococcus_phage	6.1e-11	26.4
WP_000338945.1\|109271_109583_-	hypothetical protein	NA	NA	NA	NA
WP_039110121.1\|110535_111405_+	23S ribosomal RNA methyltransferase Erm	E4ZFQ0	Streptococcus_phage	6.5e-22	29.4
WP_071547953.1\|111476_111707_-	hypothetical protein	NA	NA	NA	NA
WP_001120888.1\|111737_113231_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_000743213.1\|113441_113666_-	hypothetical protein	NA	NA	NA	NA
WP_001366550.1\|113662_114400_-	recombinase family protein	NA	NA	NA	NA
114164:114177	attL	NA	NA	NA	NA
WP_001389365.1\|114650_115415_-\|transposase	IS6-like element IS6100 family transposase	A0A077SL39	Escherichia_phage	4.3e-86	65.7
WP_000376623.1\|115921_116422_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000259031.1\|116549_117389_-	sulfonamide-resistant dihydropteroate synthase Sul1	A0A0B5J4J5	Pandoravirus	5.0e-11	27.2
WP_000679427.1\|117382_117730_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA
WP_040110410.1\|117846_118692_-	AadA family aminoglycoside 3''-O-nucleotidyltransferase	NA	NA	NA	NA
WP_000777555.1\|118784_119258_-	trimethoprim-resistant dihydrofolate reductase DfrA1	G3MBI7	Bacillus_virus	3.7e-19	32.1
WP_000845048.1\|119414_120428_+\|integrase	class 1 integron integrase IntI1	A0A1P8DJJ6	Virus_Rctr41k	1.0e-71	45.5
120837:120850	attR	NA	NA	NA	NA

DBSCAN-SWA_2

169022 : 188242

Staphylococcus_phage(33.33%)

transposase,integrase

attL 166366:166381|attR 171276:171291

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
166366:166381	attL	NA	NA	NA	NA
WP_000543934.1\|169022_170033_-\|integrase	tyrosine-type recombinase/integrase	A0A0K0N6I5	Gordonia_phage	3.1e-07	31.9
WP_000949433.1\|170035_170572_-	hypothetical protein	NA	NA	NA	NA
WP_000575657.1\|170870_171152_-	hypothetical protein	NA	NA	NA	NA
WP_000278322.1\|171413_172016_+	hypothetical protein	NA	NA	NA	NA
171276:171291	attR	NA	NA	NA	NA
WP_001067855.1\|175116_175821_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_001988464.1\|175887_176913_-\|transposase	IS30-like element ISAba125 family transposase	W5R8L2	Staphylococcus_phage	1.2e-51	38.1
WP_015056391.1\|177205_177490_+	hypothetical protein	NA	NA	NA	NA
WP_015056392.1\|177700_179230_-\|transposase	IS91 family transposase	NA	NA	NA	NA
WP_004201176.1\|179418_181059_-	chaperonin GroEL	A0A219YK78	uncultured_virus	8.2e-175	62.1
WP_004201172.1\|181114_181405_-	co-chaperone GroES	A0A221S322	uncultured_virus	2.1e-17	47.8
WP_004201171.1\|181598_181928_+	divalent-cation tolerance protein CutA	NA	NA	NA	NA
WP_004201169.1\|181932_182964_+	protein-disulfide reductase DsbD N-terminal domain-containing protein	NA	NA	NA	NA
WP_004201168.1\|182974_183613_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA
WP_004201167.1\|183617_183983_-	bleomycin binding protein Ble-MBL	NA	NA	NA	NA
WP_004201164.1\|183986_184799_-	subclass B1 metallo-beta-lactamase NDM-1	NA	NA	NA	NA
WP_001988464.1\|184899_185925_-\|transposase	IS30-like element ISAba125 family transposase	W5R8L2	Staphylococcus_phage	1.2e-51	38.1
WP_015056391.1\|186217_186502_+	hypothetical protein	NA	NA	NA	NA
WP_015056392.1\|186712_188242_-\|transposase	IS91 family transposase	NA	NA	NA	NA

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP010371

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP010371_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010371_1

476047-476191

Orphan

Consensus_repeat	Method
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010371_1

>merge|NZ_CP010371|1|476047-476191|CRISPRCasFinder
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAGGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCGATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAA

>NZ_CP010371|1|1|476047-476191|CRISPRCasFinder
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAA	GGTGCCAGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATAAGTGCTCCG
ATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTGCAAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010371.1\|WP_000893623.1\|482859_484155_+\|phosphate-regulon-sensor-histidine-kinase-PhoR	unknown	unknown	gnl\|CDD\|182895
NZ_CP010371.1\|WP_120795376.1\|473917_474001_+\|protein-YkiD	unknown	unknown	unknown
NZ_CP010371.1\|WP_001009885.1\|489307_489889_-\|ACP-phosphodiesterase	unknown	unknown	gnl\|CDD\|182207
NZ_CP010371.1\|WP_001298537.1\|474078_474990_-\|recombination-associated-protein-RdgC	unknown	unknown	gnl\|CDD\|225521
NZ_CP010371.1\|WP_000149639.1\|484561_485881_+\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	unknown	unknown	gnl\|CDD\|185331
NZ_CP010371.1\|WP_001221319.1\|480720_481923_-\|exonuclease-subunit-SbcD	unknown	unknown	gnl\|CDD\|182871
NZ_CP010371.1\|WP_001142439.1\|471949_472141_+\|protein-YaiA	unknown	unknown	gnl\|CDD\|182421
NZ_CP010371.1\|WP_001276420.1\|472398_473076_+\|AroM-family-protein	unknown	unknown	gnl\|CDD\|182491
NZ_CP010371.1\|WP_001266503.1\|489981_491052_+\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	unknown	unknown	gnl\|CDD\|234666
NZ_CP010371.1\|WP_001219309.1\|475114_476023_+\|fructokinase	unknown	unknown	gnl\|CDD\|236565
NZ_CP010371.1\|WP_000484048.1\|468673_469789_+\|diguanylate-cyclase-AdrA	unknown	unknown	gnl\|CDD\|182329
NZ_CP010371.1\|WP_000698951.1\|477577_480724_-\|exonuclease-subunit-SbcC	unknown	unknown	gnl\|CDD\|182330
NZ_CP010371.1\|WP_001295329.1\|485956_487330_+\|proline-specific-permease-ProY	unknown	unknown	gnl\|CDD\|182566
NZ_CP010371.1\|WP_000158159.1\|470734_471193_+\|YaiI/YqxD-family-protein	unknown	unknown	gnl\|CDD\|178882
NZ_CP010371.1\|WP_001310597.1\|487485_489303_+\|maltodextrin-glucosidase	unknown	unknown	gnl\|CDD\|236759
NZ_CP010371.1\|WP_001326926.1\|476267_477452_-\|MFS-transporter-AraJ	unknown	unknown	gnl\|CDD\|182234
NZ_CP010371.1\|WP_000941942.1\|473147_473432_+\|pyrimidine/purine-nucleoside-phosphorylase	unknown	unknown	gnl\|CDD\|182565
NZ_CP010371.1\|WP_000113933.1\|482112_482802_+\|phosphate-response-regulator-transcription-factor-PhoB	unknown	unknown	gnl\|CDD\|182277
NZ_CP010371.1\|WP_001295331.1\|469805_470615_-\|pyrroline-5-carboxylate-reductase	unknown	unknown	gnl\|CDD\|237008
NZ_CP010371.1\|WP_000193393.1\|471375_471900_+\|shikimate-kinase-AroL	unknown	unknown	gnl\|CDD\|235153

Protein	Function_ID	Function_description	E-value
NZ_CP010371.1\|WP_000893623.1\|482859_484155_+\|phosphate-regulon-sensor-histidine-kinase-PhoR	gnl\|CDD\|182895	PRK11006, phoR, phosphate regulon sensor histidine kinase PhoR.	0
NZ_CP010371.1\|WP_001276420.1\|472398_473076_+\|AroM-family-protein	gnl\|CDD\|182491	PRK10481, PRK10481, hypothetical protein; Provisional.	2.13662e-120
NZ_CP010371.1\|WP_001009885.1\|489307_489889_-\|ACP-phosphodiesterase	gnl\|CDD\|182207	PRK10045, PRK10045, ACP phosphodiesterase.	3.03368e-136
NZ_CP010371.1\|WP_001298537.1\|474078_474990_-\|recombination-associated-protein-RdgC	gnl\|CDD\|225521	COG2974, RdgC, DNA recombination-dependent growth factor C [DNA replication, recombination, and repair].	0
NZ_CP010371.1\|WP_000149639.1\|484561_485881_+\|branched-chain-amino-acid-transporter-carrier-protein-BrnQ	gnl\|CDD\|185331	PRK15433, PRK15433, branched-chain amino acid transporter carrier protein BrnQ.	0
NZ_CP010371.1\|WP_001221319.1\|480720_481923_-\|exonuclease-subunit-SbcD	gnl\|CDD\|182871	PRK10966, PRK10966, exonuclease subunit SbcD; Provisional.	0
NZ_CP010371.1\|WP_001142439.1\|471949_472141_+\|protein-YaiA	gnl\|CDD\|182421	PRK10380, PRK10380, hypothetical protein; Provisional.	5.14477e-31
NZ_CP010371.1\|WP_000484048.1\|468673_469789_+\|diguanylate-cyclase-AdrA	gnl\|CDD\|182329	PRK10245, adrA, diguanylate cyclase AdrA; Provisional.	0
NZ_CP010371.1\|WP_001266503.1\|489981_491052_+\|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA	gnl\|CDD\|234666	PRK00147, queA, S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Provisional.	0
NZ_CP010371.1\|WP_001219309.1\|475114_476023_+\|fructokinase	gnl\|CDD\|236565	PRK09557, PRK09557, fructokinase; Reviewed.	0
NZ_CP010371.1\|WP_000698951.1\|477577_480724_-\|exonuclease-subunit-SbcC	gnl\|CDD\|182330	PRK10246, PRK10246, exonuclease subunit SbcC; Provisional.	0
NZ_CP010371.1\|WP_001295329.1\|485956_487330_+\|proline-specific-permease-ProY	gnl\|CDD\|182566	PRK10580, proY, putative proline-specific permease; Provisional.	0
NZ_CP010371.1\|WP_000158159.1\|470734_471193_+\|YaiI/YqxD-family-protein	gnl\|CDD\|178882	PRK00124, PRK00124, YaiI/YqxD family protein.	2.50663e-80
NZ_CP010371.1\|WP_001310597.1\|487485_489303_+\|maltodextrin-glucosidase	gnl\|CDD\|236759	PRK10785, PRK10785, maltodextrin glucosidase; Provisional.	0
NZ_CP010371.1\|WP_001326926.1\|476267_477452_-\|MFS-transporter-AraJ	gnl\|CDD\|182234	PRK10091, PRK10091, MFS transport protein AraJ; Provisional.	0
NZ_CP010371.1\|WP_000941942.1\|473147_473432_+\|pyrimidine/purine-nucleoside-phosphorylase	gnl\|CDD\|182565	PRK10579, PRK10579, pyrimidine/purine nucleoside phosphorylase.	5.85948e-64
NZ_CP010371.1\|WP_000113933.1\|482112_482802_+\|phosphate-response-regulator-transcription-factor-PhoB	gnl\|CDD\|182277	PRK10161, PRK10161, phosphate response regulator transcription factor PhoB.	5.1688e-159
NZ_CP010371.1\|WP_001295331.1\|469805_470615_-\|pyrroline-5-carboxylate-reductase	gnl\|CDD\|237008	PRK11880, PRK11880, pyrroline-5-carboxylate reductase; Reviewed.	1.87564e-128
NZ_CP010371.1\|WP_000193393.1\|471375_471900_+\|shikimate-kinase-AroL	gnl\|CDD\|235153	PRK03731, aroL, shikimate kinase AroL.	2.43812e-108

>NZ_CP010371.1|WP_001219309.1|475114_476023_+|fructokinase
MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIATLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRLANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHIGGNGTAGEWGHNPLPWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESDPVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVGQLIKQFVFGGECETPVRKAKHGDSSGVRGAAWLWPQE
>NZ_CP010371.1|WP_001298537.1|474078_474990_-|recombination-associated-protein-RdgC
MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMGWVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEEITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQNLIEGLGGEAQR
>NZ_CP010371.1|WP_120795376.1|473917_474001_+|protein-YkiD
MTQRPWSKLQRKTHNIAALKIIARRSE
>NZ_CP010371.1|WP_000941942.1|473147_473432_+|pyrimidine/purine-nucleoside-phosphorylase
MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEEMTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL
>NZ_CP010371.1|WP_001276420.1|472398_473076_+|AroM-family-protein
MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREEVMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANISSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSLGNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIARLAAELLV
>NZ_CP010371.1|WP_001142439.1|471949_472141_+|protein-YaiA
MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEHPTAQEAMDAKKRYEDPDKE
>NZ_CP010371.1|WP_000193393.1|471375_471900_+|shikimate-kinase-AroL
MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC
>NZ_CP010371.1|WP_000158159.1|470734_471193_+|YaiI/YqxD-family-protein
MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATIRERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG
>NZ_CP010371.1|WP_001295331.1|469805_470615_-|pyrroline-5-carboxylate-reductase
MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPDKVAALHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTLDQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVIAEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLETGEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS
>NZ_CP010371.1|WP_000484048.1|468673_469789_+|diguanylate-cyclase-AdrA
MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLPRAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNLKTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLELTGITVSFNSAPLEWWLSLPIIVIYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGVYNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVHEGLNTLRLPNTPQVTLRISVGVAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA
>NZ_CP010371.1|WP_001326926.1|476267_477452_-|MFS-transporter-AraJ
MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKPLG
>NZ_CP010371.1|WP_000698951.1|477577_480724_-|exonuclease-subunit-SbcC
MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKTTLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRARNQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAAFLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVTLLTPEQVQSLTASLQVLTDEEKQLITAQQQEQQSLNWLTRQDELQQEASRRQQALQQALAEEEKAQPQLAALSLAQPARNLRPHWERIAEHSAALAHIRQQIEEVNTRLQSTMALRASIRHHAAKQSAELQQQQQSLNTWLQEHDRFRQWNNEPAGWRAQFSQQTSDREHLRQWQQQLTHAEQKLNALAAITLTLTADEVATALAQHAEQRPLRQHLVALHGQIVPQQKRLAQLQVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPLCGSTSHPAVEAYQALEPGVNQSRLLALENEVKKLGEEGATLRGQLDAITKQLQRDENEAQSLRQDEQALTQQWQAVTASLNITLQPLDDIQPWLDAQDEHERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQLLLTTLTGYALTLPQEDEEESWLATRQQEAQSWQQRQNELTALQNRIQQLTPILETLPQSDELPHCEETVVLENWRQVHEQCLALHSQQQTLQQQDVLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQTLVTQTAETLAQHQQHRPDDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDADNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQLTRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLESTFAVK
>NZ_CP010371.1|WP_001221319.1|480720_481923_-|exonuclease-subunit-SbcD
MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAIIVAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNTTVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIITSQAGLNGIEKQQHLLAAITDYYQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYIALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVTQPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALTESLPVEVLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLHTLAGEHEA
>NZ_CP010371.1|WP_000113933.1|482112_482802_+|phosphate-response-regulator-transcription-factor-PhoB
MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEFKLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTVRGTGYRFSTRF
>NZ_CP010371.1|WP_000893623.1|482859_484155_+|phosphate-regulon-sensor-histidine-kinase-PhoR
MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLIWHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRSGAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRDFSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTPLTVLQGYLEMMNEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTHLLNEKVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTPEGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLAIVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD
>NZ_CP010371.1|WP_000149639.1|484561_485881_+|branched-chain-amino-acid-transporter-carrier-protein-BrnQ
MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTAAFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRTATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALVILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGVTEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFGGGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLSQLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAFSDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH
>NZ_CP010371.1|WP_001295329.1|485956_487330_+|proline-specific-permease-ProY
MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVTVLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVKALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHDRQLAENQ
>NZ_CP010371.1|WP_001310597.1|487485_489303_+|maltodextrin-glucosidase
MMLNAWHLPVPPFVKQSKDQLLITLWLTGEDPPQRIMLRTEHDNEEMSVPMHKQRSQPQPGVTAWRAAIDLSSGQPRRRYSFKLLWHDRQRWFTPQGFSRMPPARLEQFAVDVPDIGPQWAADQIFYQIFPDRFARSLPREAEQDHVYYHHAAGQEIILRDWDEPVTAQAGGSTFYGGDLDGISEKLPYLKKLGVTALYLNPVFKAPSVHKYDTEDYRHVDPQFGGDGALLRLRHNTQQLGMRLVLDGVFNHSGDSHAWFDRHNRGTGGACHNPESPWRDWYSFSDDGTALDWLGYASLPKLDYQSESLVNEIYRGEDSIVRHWLKAPWNMDGWRLDVVHMLGEAGGARNNMQHVAGITEAAKETQPEAYIVGEHFGDARQWLQADVEDAAMNYRGFTFPLWGFLANTDISYDPQQIDAQTCMAWMDNYRAGLSHQQQLRMFNQLDSHDTARFKTLLGRDIARLPLAVVWLFTWPGVPCIYYGDEVGLDGKNDPFCRKPFPWQVEKQDTALFALYQRMIALRKKSQALRHGGCQVLYAEDNVVVFVRVLNQQRVLVAINRGEACEVVLPASPFLNAVQWQCKEGHGQLTDGILALPAISATVWMN
>NZ_CP010371.1|WP_001009885.1|489307_489889_-|ACP-phosphodiesterase
MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHMHRRIDVLTDNLPEVREAREWFRSETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFVCYAREQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALRDSWYDLDAHYDALETRFWQFYPRMMAQASRKAL
>NZ_CP010371.1|WP_001266503.1|489981_491052_+|tRNA-preQ1(34)-S-adenosylmethionine-ribosyltransferase-isomerase-QueA
MRVTDFSFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFTDLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPKPGAELLLGDDESINATMTARHGALFEVEFNDERSVLDILNSIGHMPLPPYIDRPDEDADRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVDTIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPFFDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRFFSYGDAMFITYNPQAINERVGE

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Crispr_ID: NZ_CP010371_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010371_2

616270-616366

Orphan

Consensus_repeat	Method
GCTTGACGCGTCTTATCAGGCCTACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010371_2

>merge|NZ_CP010371|2|616270-616366|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAACCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGATGCTTGACGCATCTTATCAGGCCTACAA

>NZ_CP010371|2|2|616270-616366|CRISPRCasFinder
GCTTGACGCGTCTTATCAGGCCTACAA	CCGGTGCCGCATCCGGCAATTGGTGCACAATGCCTGATGCGAT
GCTTGACGCATCTTATCAGGCCTACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010371.1\|WP_000190288.1\|621564_621777_-\|ribosome-associated-protein-YbcJ	unknown	unknown	gnl\|CDD\|183166
NZ_CP010371.1\|WP_000401100.1\|602502_603957_+\|putative-allantoin-permease	unknown	unknown	gnl\|CDD\|183106
NZ_CP010371.1\|WP_001295318.1\|617494_618004_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	unknown	unknown	gnl\|CDD\|223119
NZ_CP010371.1\|WP_001333621.1\|606757_607903_+\|glycerate-3-kinase	unknown	unknown	gnl\|CDD\|182152
NZ_CP010371.1\|WP_000729160.1\|621778_622645_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	unknown	unknown	gnl\|CDD\|236760
NZ_CP010371.1\|WP_000152519.1\|614530_615346_+\|DUF2877-domain-containing-protein	unknown	unknown	gnl\|CDD\|378658
NZ_CP010371.1\|WP_001143542.1\|620935_621457_-\|metal-dependent-hydrolase	unknown	unknown	gnl\|CDD\|224899
NZ_CP010371.1\|WP_000815571.1\|616430_617498_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	unknown	unknown	gnl\|CDD\|235674
NZ_CP010371.1\|WP_001350487.1\|626745_627786_+\|type-1-fimbrin-D-mannose-specific-adhesin-FimH	unknown	unknown	gnl\|CDD\|237921
NZ_CP010371.1\|WP_000776555.1\|623115_623658_+\|type-1-fimbrial-protein-subunit-FimA	unknown	unknown	gnl\|CDD\|237920
NZ_CP010371.1\|WP_000212247.1\|618121_618844_-\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_CP010371.1\|WP_000495367.1\|613260_614520_+\|DUF1116-domain-containing-protein	unknown	unknown	gnl\|CDD\|377673
NZ_CP010371.1\|WP_001310618.1\|608926_610162_-\|allantoate-deiminase	unknown	unknown	gnl\|CDD\|274471
NZ_CP010371.1\|WP_000540997.1\|608130_608916_-\|(S)-ureidoglycine-aminohydrolase	unknown	unknown	gnl\|CDD\|200251
NZ_CP010371.1\|WP_001302767.1\|605434_606736_+\|uracil/xanthine-transporter	unknown	unknown	gnl\|CDD\|183124
NZ_CP010371.1\|WP_000855378.1\|615342_616236_+\|carbamate-kinase	unknown	unknown	gnl\|CDD\|181831
NZ_CP010371.1\|WP_000255997.1\|618846_619341_-\|peptidylprolyl-isomerase-B	unknown	unknown	gnl\|CDD\|182734
NZ_CP010371.1\|WP_000703900.1\|610183_611233_-\|ureidoglycolate-dehydrogenase	unknown	unknown	gnl\|CDD\|184985
NZ_CP010371.1\|WP_000912385.1\|619514_620900_+\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_CP010371.1\|WP_000006900.1\|604016_605378_+\|allantoinase-AllB	unknown	unknown	gnl\|CDD\|169193

Protein	Function_ID	Function_description	E-value
NZ_CP010371.1\|WP_000190288.1\|621564_621777_-\|ribosome-associated-protein-YbcJ	gnl\|CDD\|183166	PRK11507, PRK11507, ribosome-associated protein YbcJ.	1.38756e-42
NZ_CP010371.1\|WP_000401100.1\|602502_603957_+\|putative-allantoin-permease	gnl\|CDD\|183106	PRK11375, PRK11375, putative allantoin permease.	0
NZ_CP010371.1\|WP_001295318.1\|617494_618004_-\|5-(carboxyamino)imidazole-ribonucleotide-mutase	gnl\|CDD\|223119	COG0041, PurE, Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase [Nucleotide transport and metabolism].	1.14024e-91
NZ_CP010371.1\|WP_001333621.1\|606757_607903_+\|glycerate-3-kinase	gnl\|CDD\|182152	PRK09932, PRK09932, glycerate 3-kinase.	0
NZ_CP010371.1\|WP_000729160.1\|621778_622645_-\|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD	gnl\|CDD\|236760	PRK10792, PRK10792, bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD.	0
NZ_CP010371.1\|WP_000152519.1\|614530_615346_+\|DUF2877-domain-containing-protein	gnl\|CDD\|378658	pfam11392, DUF2877, Protein of unknown function (DUF2877). This bacterial family of proteins are putative carboxylase proteins however this cannot be confirmed.	3.47659e-37
NZ_CP010371.1\|WP_001143542.1\|620935_621457_-\|metal-dependent-hydrolase	gnl\|CDD\|224899	COG1988, COG1988, Predicted membrane-bound metal-dependent hydrolases [General function prediction only].	4.92496e-31
NZ_CP010371.1\|WP_000815571.1\|616430_617498_-\|5-(carboxyamino)imidazole-ribonucleotide-synthase	gnl\|CDD\|235674	PRK06019, PRK06019, phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed.	2.50904e-178
NZ_CP010371.1\|WP_001350487.1\|626745_627786_+\|type-1-fimbrin-D-mannose-specific-adhesin-FimH	gnl\|CDD\|237921	PRK15199, fimH, type 1 fimbrin D-mannose specific adhesin FimH.	0
NZ_CP010371.1\|WP_000776555.1\|623115_623658_+\|type-1-fimbrial-protein-subunit-FimA	gnl\|CDD\|237920	PRK15194, PRK15194, type 1 fimbrial protein subunit FimA.	9.67411e-92
NZ_CP010371.1\|WP_000212247.1\|618121_618844_-\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	2.41122e-165
NZ_CP010371.1\|WP_000495367.1\|613260_614520_+\|DUF1116-domain-containing-protein	gnl\|CDD\|377673	pfam06545, DUF1116, Protein of unknown function (DUF1116). This family contains hypothetical bacterial proteins of unknown function.	1.27269e-131
NZ_CP010371.1\|WP_001310618.1\|608926_610162_-\|allantoate-deiminase	gnl\|CDD\|274471	TIGR03176, AllC, allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea. [Central intermediary metabolism, Nitrogen metabolism].	0
NZ_CP010371.1\|WP_000540997.1\|608130_608916_-\|(S)-ureidoglycine-aminohydrolase	gnl\|CDD\|200251	TIGR03214, ura-cupin, putative allantoin catabolism protein. This model represents a protein containing a tandem arrangement of cupin domains (N-terminal part of pfam07883 and C-terminal more distantly related to pfam00190). This protein is found in the vicinity of genes involved in the catabolism of allantoin, a breakdown product of urate and sometimes of urate iteslf. The distribution of pathway components in the genomes in which this family is observed suggests that the function is linked to the allantoate catabolism to glyoxylate pathway (GenProp0686) since it is sometimes found in genomes lacking any elements of the xanthine-to-allantoin pathways (e.g. in Enterococcus faecalis).	2.39799e-151
NZ_CP010371.1\|WP_001302767.1\|605434_606736_+\|uracil/xanthine-transporter	gnl\|CDD\|183124	PRK11412, PRK11412, uracil/xanthine transporter.	0
NZ_CP010371.1\|WP_000855378.1\|615342_616236_+\|carbamate-kinase	gnl\|CDD\|181831	PRK09411, PRK09411, carbamate kinase; Reviewed.	0
NZ_CP010371.1\|WP_000255997.1\|618846_619341_-\|peptidylprolyl-isomerase-B	gnl\|CDD\|182734	PRK10791, PRK10791, peptidylprolyl isomerase B.	9.12357e-121
NZ_CP010371.1\|WP_000703900.1\|610183_611233_-\|ureidoglycolate-dehydrogenase	gnl\|CDD\|184985	PRK15025, PRK15025, ureidoglycolate dehydrogenase; Provisional.	0
NZ_CP010371.1\|WP_000912385.1\|619514_620900_+\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_CP010371.1\|WP_000006900.1\|604016_605378_+\|allantoinase-AllB	gnl\|CDD\|169193	PRK08044, PRK08044, allantoinase AllB.	0

>NZ_CP010371.1|WP_000855378.1|615342_616236_+|carbamate-kinase
MKTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLARSYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQPRKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIRHATPDELAPFAKADGSMGPKVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCISL
>NZ_CP010371.1|WP_000152519.1|614530_615346_+|DUF2877-domain-containing-protein
MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHRQGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPPAHPQPLAAAWMQRAEETGLFGPLALAASDPLPAELRQFRHCFQAALNGVKTDWRHWLGKGPGLTPSHDDTLSGMLLAAWYYGALDARSGRPFFACSDNLQLVTTAVSVSYLRYAAQGYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP
>NZ_CP010371.1|WP_000495367.1|613260_614520_+|DUF1116-domain-containing-protein
MFTSVAQANAAVIEQIRRARPHWLDVQPASSLISELNEGKTLLHAGPPMRWQEMTGPMKGACVGACLFEGWAKDEAQALAILEQGEVNFIPCHHVNAVGPMGGITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLSAALGRMERGIDLTAMMAQGITMGDEFHQRNIASSALLMRALAPQIARLDHDKQHIAEVMDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFTAPVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAARAVSEEMAEIYLERNMQLQIPSWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQIGAGTVRAPLACFEQALEALAESMGIG
>NZ_CP010371.1|WP_000703900.1|610183_611233_-|ureidoglycolate-dehydrogenase
MKISRETLHQLIENKLCQAGLKREHAATVAEVLVYADARGIHSHGAVRVEYYAERISKGGTNREPEFRLEETGPCSAILHADNAAGQVAAKMGMEHAIKTAQQNGVAVVGISRMGHSGAISYFVQQAARAGFIGISMCQSDPMVVPFGGAEIYYGTNPLAFAAPGEGDEILTFDMATTVQAWGKVLDARSRNMSIPDTWAVDKNGVPTTDPFAVHALLPAAGPKGYGLMMMIDVLSGVLLGLPFGRQVSSMYDDLHAGRNLGQLHIVINPNFFSSSELFRQHLSQTMRELNAITPAPGFNQVYYPGQDQDIKQRKAAVEGIEIVDDIYQYLISDALYNTSYETKNPFAQ
>NZ_CP010371.1|WP_001310618.1|608926_610162_-|allantoate-deiminase
MITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKGNSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDTVYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGIDIDLWMDEEPVPMNKELVATLTELCEREKLNYRVMHSGAGHDAQIFAPRVPTCMIFIPSINGISHNPAERTNITDLAEGVKTLALMLYQLAWQK
>NZ_CP010371.1|WP_000540997.1|608130_608916_-|(S)-ureidoglycine-aminohydrolase
MGYLNNVTGYREDLLANRAIVKHGNFALLTPDGLVKNIIPGFENCDATILSTPKLGASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKAEGKTFALSEGGYLYCPPGSLMTFVNAQAEDSQIFLYKRRYVPVEGYAPWLVSGNASELERIHYEGMDDVILLDFLPKELGFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNLDNNWIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSKDCNRDVEI
>NZ_CP010371.1|WP_001333621.1|606757_607903_+|glycerate-3-kinase
MKIVIAPDSFKESLSAEKCCQAIKAGFSTLFPDANYICLPIADGGEGTVDAMVAATGGNIVTLEVCGPMGEKVNAFYGLTGDGKTAVIEMAAASGLMLVAPEKRNPLLASSFGTGELIRHALDNDIRHIILGIGGSATVDGGMGMAQALGVRFLDADGQALAANGGNLARVASIEMDECDPRLANCHIEVACDVDNPLVGARGAAAVFGPQKGATPEMVEELEQGLQNYARVLQQQTEINVCQMAGGGAAGGMGIAAAVFLNADIKPGIEIVLNAVNLAQAVQGAALVITGEGRIDSQTAGGKAPLGVASVAKQFNVPVIGIAGVLGDGVEVVHQYGIDAVFSILPRLAPLAEVLASGETNLFNSARNIACAIKIGQGIKN
>NZ_CP010371.1|WP_001302767.1|605434_606736_+|uracil/xanthine-transporter
MFNFAVSRESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITLGEASRGTPINDIATSLAVGIALSGVLTMLIGFSGLGHRLARLFTPSVMVLFMLMLGAQLTTIFFKGMLGLPFGIADPNFKIQLPPFALSVAVMCLVLAMIIFLPQRFARYGLLVGTITGWLLWYFCFPSSHSLSGELHWQWFPLGSGGALSPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGLLTQTGDYTRRSFIYGSVICLLVALVPALTRLFCSIPLPVSSAVMLVSYLPLLFSALVFSQQITFTARNIYRLALPLFVGIFLMALPPVYLQDLPLTLRPLLSNGLLVGILLAVLMDNLIPWERIE
>NZ_CP010371.1|WP_000006900.1|604016_605378_+|allantoinase-AllB
MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYNIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVMFDEAVQKRGMSLPMFGKLMATNAADIFGLQQKGRIAPGKDADFVFIQPNSSYVLTNDDLEYRHKVSPYVGRTIGARITKTILRGDVIYDIEQGFPVAPKGQFILKHQQ
>NZ_CP010371.1|WP_000401100.1|602502_603957_+|putative-allantoin-permease
MEHQRKLFQQRGYSEDLLPKTQSQRTWKTFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFSIMLAIILSAFFIAAVMVLNGAAGSKYGVPFAMILRASYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLACLILIGKIWPGFLTLGGDFTLLGLSLPGLITFLIFWLVNVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPIFDYIPSGIQKAENGGFLFLVVINAVVAVWAAPAVSASDFTQNAHSFREQALGQTLGLVVAYILFAVAGVCIIAGASIHYGADTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAAIAPTKLTYKNGVLIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMMAHYFVVMRGQINLDELYTAPGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIHFMEPLSRVSWFVGVIVAFAAYALLKKRTTAEKTGEQKTIG
>NZ_CP010371.1|WP_000815571.1|616430_617498_-|5-(carboxyamino)imidazole-ribonucleotide-synthase
MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQSVITAEIERWPETALTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAERSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSGEVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELGYVGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVVNNPSVMINLIGSDVNYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEALIPLLPPEYASGVIWAQSKFG
>NZ_CP010371.1|WP_001295318.1|617494_618004_-|5-(carboxyamino)imidazole-ribonucleotide-mutase
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
>NZ_CP010371.1|WP_000212247.1|618121_618844_-|UDP-2,3-diacylglucosamine-diphosphatase
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRKMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQTLFLALPLFVRKRIAARMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF
>NZ_CP010371.1|WP_000255997.1|618846_619341_-|peptidylprolyl-isomerase-B
MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRVINGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDVVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE
>NZ_CP010371.1|WP_000912385.1|619514_620900_+|cysteine--tRNA-ligase
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK
>NZ_CP010371.1|WP_001143542.1|620935_621457_-|metal-dependent-hydrolase
MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLSFKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVFIGRRWFRAGLIRCWLFLTVSLLSHSLLDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLPGMLLMGMLWWRRR
>NZ_CP010371.1|WP_000190288.1|621564_621777_-|ribosome-associated-protein-YbcJ
MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGAVETRKRCKIVAGQTVSFAGHSVQVVA
>NZ_CP010371.1|WP_000729160.1|621778_622645_-|bifunctional-methylenetetrahydrofolate-dehydrogenase/methenyltetrahydrofolate-cyclohydrolase-FolD
MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSNPASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPGDWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTLQACVEYHDPQDE
>NZ_CP010371.1|WP_000776555.1|623115_623658_+|type-1-fimbrial-protein-subunit-FimA
MKLRFISSALAAALFAATGSYAAVVDGGTIHFEGELVNAACSVNTDSADQVVTLGQYRTDIFNAVGNTSALIPFTIQLNDCDPVVAANAAVAFSGQADAINDNLLAIASSTNTTTATGVGIEILDNTSAILKPDGNSFSTNQNLIPGTNVLHFSARYKGTGTSASAGQANADATFIMRYE
>NZ_CP010371.1|WP_001350487.1|626745_627786_+|type-1-fimbrin-D-mannose-specific-adhesin-FimH
MHTSWLIKEIINKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNIFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLHDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAVKCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ

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Crispr_ID: NZ_CP010371_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010371_3

2426054-2426180

Orphan

Consensus_repeat	Method
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010371_3

>merge|NZ_CP010371|3|2426054-2426180|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCTCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGATTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

>NZ_CP010371|3|3|2426054-2426180|CRISPRCasFinder
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC	TCCGGGTGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACGGCTCGGA
TTTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010371.1\|WP_000301050.1\|2427674_2428325_-\|lipopolysaccharide-kinase-InaA	unknown	unknown	gnl\|CDD\|182136
NZ_CP010371.1\|WP_001220077.1\|2419269_2423022_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	unknown	unknown	gnl\|CDD\|182059
NZ_CP010371.1\|WP_001225852.1\|2406219_2406996_-\|YfaP-family-protein	unknown	unknown	gnl\|CDD\|227021
NZ_CP010371.1\|WP_000332037.1\|2426236_2427367_+\|ribonucleotide-diphosphate-reductase-subunit-beta	unknown	unknown	gnl\|CDD\|181647
NZ_CP010371.1\|WP_039268448.1\|2431499_2433128_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	unknown	unknown	gnl\|CDD\|236847
NZ_CP010371.1\|WP_001000379.1\|2434373_2435564_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	unknown	unknown	gnl\|CDD\|132422
NZ_CP010371.1\|WP_001295211.1\|2413188_2413812_-\|DUF1175-domain-containing-protein	unknown	unknown	gnl\|CDD\|225774
NZ_CP010371.1\|WP_000948731.1\|2429868_2431227_-\|glycerol-3-phosphate-transporter	unknown	unknown	gnl\|CDD\|236889
NZ_CP010371.1\|WP_001075164.1\|2423717_2426003_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	unknown	unknown	gnl\|CDD\|181649
NZ_CP010371.1\|WP_001281225.1\|2415645_2418273_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP010371.1\|WP_000990765.1\|2418419_2419142_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	unknown	unknown	gnl\|CDD\|235350
NZ_CP010371.1\|WP_001104551.1\|2407000_2408650_-\|YfaQ-family-protein	unknown	unknown	gnl\|CDD\|227732
NZ_CP010371.1\|WP_000012305.1\|2413808_2415497_-\|DUF2138-domain-containing-protein	unknown	unknown	gnl\|CDD\|227030
NZ_CP010371.1\|WP_000140472.1\|2435756_2436656_+\|ISNCY-family-transposase	unknown	unknown	gnl\|CDD\|182167
NZ_CP010371.1\|WP_000779105.1\|2428787_2429864_-\|glycerophosphodiester-phosphodiesterase	unknown	unknown	gnl\|CDD\|236859
NZ_CP010371.1\|WP_000786547.1\|2404961_2406146_+\|acetyl-CoA-acetyltransferase	unknown	unknown	gnl\|CDD\|180261
NZ_CP010371.1\|WP_000150333.1\|2436668_2436854_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182167
NZ_CP010371.1\|WP_001209927.1\|2433117_2434377_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	unknown	unknown	gnl\|CDD\|225617
NZ_CP010371.1\|WP_000536564.1\|2408650_2413165_-\|alpha-2-macroglobulin-family-protein	unknown	unknown	gnl\|CDD\|225248
NZ_CP010371.1\|WP_000135040.1\|2427366_2427621_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	unknown	unknown	gnl\|CDD\|182668

Protein	Function_ID	Function_description	E-value
NZ_CP010371.1\|WP_000301050.1\|2427674_2428325_-\|lipopolysaccharide-kinase-InaA	gnl\|CDD\|182136	PRK09902, PRK09902, lipopolysaccharide kinase InaA.	2.86156e-158
NZ_CP010371.1\|WP_001220077.1\|2419269_2423022_-\|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC	gnl\|CDD\|182059	PRK09752, PRK09752, AIDA-I family autotransporter YfaL.	0
NZ_CP010371.1\|WP_001225852.1\|2406219_2406996_-\|YfaP-family-protein	gnl\|CDD\|227021	COG4676, COG4676, Uncharacterized protein conserved in bacteria [Function unknown].	4.17009e-153
NZ_CP010371.1\|WP_000332037.1\|2426236_2427367_+\|ribonucleotide-diphosphate-reductase-subunit-beta	gnl\|CDD\|181647	PRK09101, nrdB, ribonucleotide-diphosphate reductase subunit beta; Reviewed.	0
NZ_CP010371.1\|WP_039268448.1\|2431499_2433128_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A	gnl\|CDD\|236847	PRK11101, glpA, anaerobic glycerol-3-phosphate dehydrogenase subunit A.	0
NZ_CP010371.1\|WP_001000379.1\|2434373_2435564_+\|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C	gnl\|CDD\|132422	TIGR03379, glycerol3P_GlpC, glycerol-3-phosphate dehydrogenase, anaerobic, C subunit. Members of this protein family are the membrane-anchoring, non-catalytic C subunit, product of the glpC gene, of a three-subunit, FAD-dependent, anaerobic glycerol-3-phosphate dehydrogenase. GlpC lasks classical hydrophobic transmembrane helices; Cole, et al suggest interaction with the membrane may involve amphipathic helices. GlcC has conserved Cys-containing motifs suggestive of iron-sulfur binding. This complex is found mostly in Escherichia coli and closely related species. [Energy metabolism, Anaerobic].	0
NZ_CP010371.1\|WP_001295211.1\|2413188_2413812_-\|DUF1175-domain-containing-protein	gnl\|CDD\|225774	COG3234, COG3234, Uncharacterized protein conserved in bacteria [Function unknown].	7.99004e-141
NZ_CP010371.1\|WP_000948731.1\|2429868_2431227_-\|glycerol-3-phosphate-transporter	gnl\|CDD\|236889	PRK11273, glpT, glycerol-3-phosphate transporter.	0
NZ_CP010371.1\|WP_001075164.1\|2423717_2426003_+\|ribonucleoside-diphosphate-reductase-subunit-alpha	gnl\|CDD\|181649	PRK09103, PRK09103, ribonucleoside-diphosphate reductase subunit alpha.	0
NZ_CP010371.1\|WP_001281225.1\|2415645_2418273_-\|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP010371.1\|WP_000990765.1\|2418419_2419142_+\|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase	gnl\|CDD\|235350	PRK05134, PRK05134, bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG.	1.65303e-171
NZ_CP010371.1\|WP_001104551.1\|2407000_2408650_-\|YfaQ-family-protein	gnl\|CDD\|227732	COG5445, COG5445, Predicted secreted protein [Function unknown].	8.04949e-127
NZ_CP010371.1\|WP_000012305.1\|2413808_2415497_-\|DUF2138-domain-containing-protein	gnl\|CDD\|227030	COG4685, COG4685, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_CP010371.1\|WP_000140472.1\|2435756_2436656_+\|ISNCY-family-transposase	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	0
NZ_CP010371.1\|WP_000779105.1\|2428787_2429864_-\|glycerophosphodiester-phosphodiesterase	gnl\|CDD\|236859	PRK11143, glpQ, glycerophosphodiester phosphodiesterase; Provisional.	0
NZ_CP010371.1\|WP_000786547.1\|2404961_2406146_+\|acetyl-CoA-acetyltransferase	gnl\|CDD\|180261	PRK05790, PRK05790, putative acyltransferase; Provisional.	0
NZ_CP010371.1\|WP_000150333.1\|2436668_2436854_+\|hypothetical-protein	gnl\|CDD\|182167	PRK09956, PRK09956, ISNCY family transposase.	1.35852e-30
NZ_CP010371.1\|WP_001209927.1\|2433117_2434377_+\|glycerol-3-phosphate-dehydrogenase-subunit-GlpB	gnl\|CDD\|225617	COG3075, GlpB, Anaerobic glycerol-3-phosphate dehydrogenase [Amino acid transport and metabolism].	0
NZ_CP010371.1\|WP_000536564.1\|2408650_2413165_-\|alpha-2-macroglobulin-family-protein	gnl\|CDD\|225248	COG2373, COG2373, Large extracellular alpha-helical protein [General function prediction only].	0
NZ_CP010371.1\|WP_000135040.1\|2427366_2427621_+\|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE	gnl\|CDD\|182668	PRK10713, PRK10713, 2Fe-2S ferredoxin-like protein.	2.72138e-53

>NZ_CP010371.1|WP_001075164.1|2423717_2426003_+|ribonucleoside-diphosphate-reductase-subunit-alpha
MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELRSHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPALYDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNRVTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTPTRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHTGCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMDYGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQRVKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLNDVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAMGRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGACPWFNETTYAKGILPIDTYKKDLDTIANEPLHYDWEALRESIKTHGLRNSTLSALMPSETSSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLVGIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAEDAQDDLVPSIQDDGCESGACKI
>NZ_CP010371.1|WP_001220077.1|2419269_2423022_-|AIDA-I-family-autotransporter-adhesin-YfaL/EhaC
MRIIFLRKEYLSLLPSMIASLFSANGVAAVTDSCQGYDVKASCQASRQSLSGITQDWSIADGQWLVFSDMTNNASGGAVFLQQGAEFSLLPENETGMTLFANNTVTGEYNNGGAIFAKENSTLNLTDVIFSGNVAGGYGGAIYSSGTNDTGAVDLRVTNAMFRNNIANDGKGGAIYTINNDVYLSDVIFDNNQAYTSTSYSDGDGGAIDVTDNNSDSKHPSGYTIVNNTAFTNNTAEGYGGAIYTNSVTAPYLIDISVDDSYSQNGGVLVDENNSAAGYGDGPSSAAGGFMYLGLSEVTFDIADGKTLVIGNTENDGAVDSIAGTGLITKTGSGDLVLNADNNDFTGEMQIENGEVTLGRSNSLMNVGDTHCQDDPQDCYGLTIGSIDQYQNQAELNVGSTQQTFVHALTGFQNGTLNIDAGGNVTVNQGSFAGIIEGAGQLTIAQNGSYVLAGAQSMALTGDIVVDDGAVLSLEGDAADLTALQDDPQSIVLNGGVLDLSDFSTWQSGTSYNDGLEVSGSSGTVIGSQDVVDLAGGDNLHIGGDGKDGVYVVVDASDGQVSLANNNSYLGTTQIASGTLMVSDNSQLGDTHYNRQVIFTDKQQESVMEITSDVDTRSDAAGHGRDIEMRADGEVAVDAGVDTQWGALMADSSGQHQDEGSTLTKTGAGTLELTASGTTQSAVRVEEGTLKGDVADILPYASSLWVGDGATFVTGADQDIQSIDAISSGTIDISDGTVLRLTGQDTSVALNASLFNGDGTLVNATDGVTLTGELNTNLETDSLTYLSNVTVNGNLTNTSGAVSLQNGVAGDTLTVNGDYTGGGTLLLDSELNGDDSVSDQLVMNGNTAGNTTVVVNSITGIGEPTSTGIKVVDFAADPTQFQNNAQFSLAGSGYVNMGAYDYTLVEDNNDWYLRSQEVTPPSPPDPDPTPDPDPTPDPDPTPDPEPTPAYQPVLNAKVGGYLNNLRAANQAFMMERRDHAGGDGQTLNLRVIGGDYHYTAAGQLAQHEDTSTVQLSGDLFSGRWGTDGEWMLGIVGGYSDNQGDSRSNMTGTRADNQNHGYAVGLTSSWFQHGNQKQGAWLDSWLQYAWFSNDVSEQEDGTDHYHSSGIIASLEAGYQWLPGRGVVIEPQAQVIYQGVQQDDFTAANRARVSQSQGDDIQTRLGLHSEWRTAVHVIPTLDLNYYHDPHSTEIEEDGSTISDDAVKQRGEIKVGVTGNISQRVSLRGSVAWQKGSDDFAQTAGFLSMTVKW
>NZ_CP010371.1|WP_000990765.1|2418419_2419142_+|bifunctional-3-demethylubiquinone-3-O-methyltransferase/2-octaprenyl-6-hydroxy-phenol-methylase
MNAEKSPVNHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLRLGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTLNRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNPITNTFKLGPGVDVNYMLHTQNK
>NZ_CP010371.1|WP_001281225.1|2415645_2418273_-|DNA-topoisomerase-(ATP-hydrolyzing)-subunit-A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDLAVYNTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDPIIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELELVREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAAEGDDEIAPEVDVDDEPEEE
>NZ_CP010371.1|WP_000012305.1|2413808_2415497_-|DUF2138-domain-containing-protein
MSGEKKAKGWRFYGLVGFGAIALLSAGVWALQYAGSGPEKTLSPLVVHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIEGSIRRIVYEHDLTLKDKLFSSLLDQPAQAALWHDKQGHLSHYMVLIQRSGLSKLLEPLLFAATSDSQLSKTEISSIKINSETVPVYQLRYNGNNALMFATYQDKMLVFSSTDMLFKDDQQDTEATAIAGDLLSGKKRWQASFGLEERTAEKTPVRQRIVVSARWLGFGYQRLMPSFAGVRFEMGNDGWHSFVALNDESASVDASFDFTPVWNSMPAGASFCVAVPYSHGIAEEMLSHISQENDKLNGALDGAAGLCWYEDSKLQTPLFVGQFDGTAEQAQLPGKLFTQNIGAHESKAPEGVLPVSQTQQGEAQIWRREVSSRYGQYPKAQAAQPDQLMSDYFFRVSLAMQNKTLLFSLDDTLVNNALQTLNKTRPAMVDVIPTDGIVPLYINPQGIAKLLRNETLTSLPKNLEPVFYNAAQTLLMPKLDALSQQPRYVMKLAQMEPGAAWQWLPITWQPL
>NZ_CP010371.1|WP_001295211.1|2413188_2413812_-|DUF1175-domain-containing-protein
MRHGLLALICWLCCVVAHSEMLNVEQSGLFRAWFVRIAQEQLRQGPSPRWYQQDCAGLVRFAANETLKVHDSKWLKSNGLSSQYLPPEMTLTPEQRQLAQNWNQGNGKTGPYVTAINLIQYNSQFIGQDINQALPGDMIFFDQGDAQHLMVWMGRYVIYHTGSATKTDNGMRAVSLQQLMTWKDTRWIPNDSNPNFIGIYRLNFLAR
>NZ_CP010371.1|WP_000536564.1|2408650_2413165_-|alpha-2-macroglobulin-family-protein
MGTGLANADDSLPSSNYAPPAGGTFFLLADSSFSSSEEAKVRLEAPGRDYRRYQMEEYGGVDVRLYRIPDPMAFLRQQKNLHRIVVQPQYLGDGLNNTLTWLWDNWYGKSRRVMQRTFSSQSRQNVTQALPELQLGNAIIKPSRYVQNNQFSPLKKYPLVKQFRYPLWQAKPFEPQQGVKLEGASSNFISPQPGNIYIPLGQQEPGLYLVEAMVGGYRATTVVFVSDTVALSKVSGKELLVWTAGKKQGEAKPGSEILWTDGLGVMTRGVTDDSGTLQLQHISPERSYILGKDAEGGVFVSENFFYESEIYNTRLYIFTDRPLYRAGDRVDVKVIGREFHDPLHSSPIVSAPAKLSVLDANGSLLQTVNVTLDARNGGQGSFRLPENAVAGGYELRLAYRNQVYSSSFRVANYIKPHFEIGLALAKKEFKTGEAVSGKLQLLYPDGEPVKNARVQLSLRAQQLSMVGNDLRYAGRFPVSLEGSETVSDASGHVALNLPAADKPSRYLLTVSASDGAAYRVTTTKEILIERGLAHYSLSTAAQYSNSGESVVFRYAALESSKQVPVTYEWLRLEDRTSHSGELPSGGKSFTVNFAKPGNYNLTLRDKDGLILAGLSHAVSGKGSTAHTGTVDIVADKTLYQPGETAKMLITFPEPIDEALLTLERDRVEQQSLLSHPANWLTLQRLNDTQYEARVPVSNSFAPNITFSVLYTRNGQYSFQNAGIKVAVPQLDIRVKTDKTHYQPGELVNVELTSSLKGKPVSAQLTVGVVDEMIYALQPEIAPNIGKFFYPLGRNNVRTSSSLSFISYDQALSSEPVAPGATNRSERRVKMLERPRREEVDTAAWMPSLTTDKQGKAYFTFLMPDSLTRWRITARGMNGDGLVGQGRAYLRSEKNLYMKWSMPTVYRVGDKPAAGLFIFSQQDNEPVALVTKFAGAEMRQTLTLHKGANYISLTQNIQQSGLLSAELQQNGQVQDSISTKLSFVDNSWPVEQQKNVMLGGGDNALMLPEQASNIRLQSSETPQEIFRNNLDALVDEPWGGVINTGSRLIPLSLAWRSLADHQSAAANDIRQMIQDNRLRLMQLAGPGARFTWWGEDGNGDAFLTAWAWYADWQASQAIGVTQQPEYWQHMLDSYAEQADNMPLLHRALVLAWAQEMNLPCKTLLKGLDEAIARRGTKTEDFSEEDTRDINDSLILDTPESPLADAVANVLTMTLLKKAQLKSTVMPQVQQYAWDKAANSNQPLAHTVVLLNSGGDATQTAAILSGLTAEQSTIERALAMNWLAKYMATMPPVVLPAPAGAWAKHKLTGGGEDWRWVGQGVPDILSFGDELSPQNVQVRWREPAKMAQQSNIPVTVERQLYRLIPGEEEMSFILQPVTSNEIDSDALYLDEITLTSEQDAVLRYGQVEVPLPPGADVERTTWGISVNKPNAAKQQGQLLEKARNEMGELAYMVPVKELTGTVTFRHLLRFSQKGQFVLPPARYVRSYAPAQQSVAAGSEWTGMQVK
>NZ_CP010371.1|WP_001104551.1|2407000_2408650_-|YfaQ-family-protein
MNWRRIVWLLALVTLPTLAEETPLQLVLRGAQHDQLYQLSSSGVTKVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRDTALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLATLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTDGTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKSTTAVNPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDREAKSTPPEAAKAMTVAIRTFLQQNANREGDCLTIPDSSATQRVSASPATTWARTMTAWTQDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRSTCQLLPKAKAWLAKKMPQWRRILQAETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRNFFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD
>NZ_CP010371.1|WP_001225852.1|2406219_2406996_-|YfaP-family-protein
MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASFSQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKVQQGRLVVNGASMPQRIESDGSFARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHVVTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPIHGRYQVYINYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTLVKSFDW
>NZ_CP010371.1|WP_000786547.1|2404961_2406146_+|acetyl-CoA-acetyltransferase
MKNCVIVSAVRTAIGSFNGSLASTSAIDLGATVIKAAIERAKIDSQHVDEVIMGNVLQAGLGQNPARQALLKSGLAETVCGFTVNKVCGSGLKSVALAAQAIQAGQAQSIVAGGMENMSLAPYLLDAKARSGYRLGDGQVYDVILRDGLMCATHGYHMGITAENVAKEYGITREMQDELALHSQRKAAAAIESGAFTAEIVPVNVVTRKKTFVFSQDEFPKANSTAEALGALRPAFDKAGTVTAGNASGINDGAAALVIMEESAALAAGLTPLARIKSYASGGVPPALMGMGPVPATQKALQLAGLQLADIDLIEANEAFAAQFLAVGKNLGFDSEKVNVNGGAIALGHPIGASGARILVTLLHAMQARDKTLGLATLCIGGGQGIAMVIERLN
>NZ_CP010371.1|WP_000332037.1|2426236_2427367_+|ribonucleotide-diphosphate-reductase-subunit-beta
MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDELIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFAFAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDLFVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIPWINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL
>NZ_CP010371.1|WP_000135040.1|2427366_2427621_+|ferredoxin-like-diferric-tyrosyl-radical-cofactor-maintenance-protein-YfaE
MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGSCRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM
>NZ_CP010371.1|WP_000301050.1|2427674_2428325_-|lipopolysaccharide-kinase-InaA
MAVSAKYDEFNHWWATEGDWVEEPNYRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSINRQHGCCYVRHIYVKTEGNAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEPIPKADWEQVKAYYYAM
>NZ_CP010371.1|WP_000779105.1|2428787_2429864_-|glycerophosphodiester-phosphodiesterase
MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARKDGRYYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDALYNKAGVNGLFTDFPDKAVKFLNKE
>NZ_CP010371.1|WP_000948731.1|2429868_2431227_-|glycerol-3-phosphate-transporter
MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQERNGG
>NZ_CP010371.1|WP_039268448.1|2431499_2433128_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-A
MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIATGATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLSFQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLDAKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAEYADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYNEIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIVLLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEPAEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVENLNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKGVQPIAWGDALRESEFTRWVYQGLCGVEKEQKDAL
>NZ_CP010371.1|WP_001209927.1|2433117_2434377_+|glycerol-3-phosphate-dehydrogenase-subunit-GlpB
MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGSLDLLSHLPDGQPVTDIHSGLESLRQQAPAHPYSLLEPQRVLDLACQAQALIAESGAQLQGSVELAHQRVTPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLRELGLAVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMILMPACFGLADDKLWRWLNEKLPCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPGDEVKKVTCKNGVVNEIWTRNHADIPLRPRFAVLASGSFFSGGLVAERNGIREPILGLDVLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIAQGCGGGVCAVSALHAAQQIAQRAGGQQ
>NZ_CP010371.1|WP_001000379.1|2434373_2435564_+|anaerobic-glycerol-3-phosphate-dehydrogenase-subunit-C
MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLKDGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMGSVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSVAAQQAQYKDQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQAITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWRKLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRNIPGLELTVLDSQCCGIAGTYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLAQALA
>NZ_CP010371.1|WP_000140472.1|2435756_2436656_+|ISNCY-family-transposase
MTESTASSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQTLRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAAMQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDITIVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQCGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLEQGFEREIVLATTQLTDADIPNCH
>NZ_CP010371.1|WP_000150333.1|2436668_2436854_+|hypothetical-protein
MTIAERLRQEGHQIGWQEGKLEGLHEQAIKIALRMLEQGFDRDQVLAATQLSEADLAANNH

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Crispr_ID: NZ_CP010371_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010371_4

2931644-2932283

TypeI-E

I-E

Consensus_repeat	Method
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRISPRCasFinder
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CRT
CGGTTTATCCCCGCTGGCGCGGGGAACTC	PILER-CR

10 spacers

cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3

The CRISPR arrays of NZ_CP010371_4

>merge|NZ_CP010371|4|2931644-2932283|CRISPRCasFinder,CRT,PILER-CR
CGGTTTATCCCCGCTGATGCGGGGAACACCAGCGTCAGGCGTGAAATCTCACCGTCGTTGCCGGTTTATCCCTGCTGGCGCGGGGAACTCTCGGTTCAGGCGTTGCAAACCTGGCTACCGGGCGGTTTATCCCCGCTAACGCGGGGAACTCGTAGTCCATCATTCCACCTATGTCTGAACTCCCGGTTTATCCCCGCTGGCGCGGGGAACTCCCGGGGGATAATGTTTACGGTCATGCGCCCCCCGGTTTATCCCCGCTGGCGCGGGGAACTCATCGTCCATATTAACAATCGTGGTGAGTTCAACGGTTTATCCCCGCTGGCGCGGGGAACTCACTATGGCCCCGGCAAAAAACGCGCTGGTGGGCGGTTTATCCCCGCTGGCGCGGGGAACTCTGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAGCGGTTTATCCCCGCTGGCGCGGGGAACTCAAGCTGGCTGGCAATCTCTTTCGGGGTGAGTCCGGTTTATCCCCGCTGGCGCGGGGAACTCTAGTTTCCGTATCTCCGGATTTATAAAGCTGACGGTTTATCCCCGCTGGCGCGGGGAACTCGCGACCGCTCAGAAATTCCAGACCCGATCCAAACGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP010371|4|4|2931644-2932283|CRISPRCasFinder
CGGTTTATCCCCGCTGATGCGGGGAACAC	CAGCGTCAGGCGTGAAATCTCACCGTCGTTGC
CGGTTTATCCCTGCTGGCGCGGGGAACTC	TCGGTTCAGGCGTTGCAAACCTGGCTACCGGG
CGGTTTATCCCCGCTAACGCGGGGAACTC	GTAGTCCATCATTCCACCTATGTCTGAACTCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CCGGGGGATAATGTTTACGGTCATGCGCCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATCGTCCATATTAACAATCGTGGTGAGTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTATGGCCCCGGCAAAAAACGCGCTGGTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAGCTGGCTGGCAATCTCTTTCGGGGTGAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAGTTTCCGTATCTCCGGATTTATAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGACCGCTCAGAAATTCCAGACCCGATCCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP010371|4|1|2931644-2932283|CRT
CGGTTTATCCCCGCTGATGCGGGGAACAC	CAGCGTCAGGCGTGAAATCTCACCGTCGTTGC
CGGTTTATCCCTGCTGGCGCGGGGAACTC	TCGGTTCAGGCGTTGCAAACCTGGCTACCGGG
CGGTTTATCCCCGCTAACGCGGGGAACTC	GTAGTCCATCATTCCACCTATGTCTGAACTCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CCGGGGGATAATGTTTACGGTCATGCGCCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATCGTCCATATTAACAATCGTGGTGAGTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTATGGCCCCGGCAAAAAACGCGCTGGTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAGCTGGCTGGCAATCTCTTTCGGGGTGAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAGTTTCCGTATCTCCGGATTTATAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGACCGCTCAGAAATTCCAGACCCGATCCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

>NZ_CP010371|4|1|2931827-2932283|PILER-CR
CGGTTTATCCCCGCTGGCGCGGGGAACTC	CCGGGGGATAATGTTTACGGTCATGCGCCCCC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ATCGTCCATATTAACAATCGTGGTGAGTTCAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	ACTATGGCCCCGGCAAAAAACGCGCTGGTGGG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TGGGCGGCTTGCCTTGCAGCCAGCTCCAGCAG
CGGTTTATCCCCGCTGGCGCGGGGAACTC	AAGCTGGCTGGCAATCTCTTTCGGGGTGAGTC
CGGTTTATCCCCGCTGGCGCGGGGAACTC	TAGTTTCCGTATCTCCGGATTTATAAAGCTGA
CGGTTTATCCCCGCTGGCGCGGGGAACTC	GCGACCGCTCAGAAATTCCAGACCCGATCCAAA
CGGTTTATCCCCGCTGGCGCGGGGAACTC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010371.1\|WP_071532149.1\|2936449_2937934_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	cas8e	cd09669_cas8e_CAS-I-E	gnl\|CDD\|236613
NZ_CP010371.1\|WP_000246138.1\|2925722_2926433_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	unknown	unknown	gnl\|CDD\|234670
NZ_CP010371.1\|WP_000517476.1\|2926451_2926763_-\|cell-division-protein-FtsB	unknown	unknown	gnl\|CDD\|179156
NZ_CP010371.1\|WP_001334996.1\|2934193_2934868_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	cas5	cd09645_cas5_CAS-I-E	gnl\|CDD\|273842
NZ_CP010371.1\|WP_000490428.1\|2930523_2931561_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	unknown	unknown	gnl\|CDD\|182299
NZ_CP010371.1\|WP_001381369.1\|2932388_2932673_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	cas2	cd09648_cas2_CAS-I-E	gnl\|CDD\|236930
NZ_CP010371.1\|WP_000568943.1\|2924197_2925247_-\|tRNA-pseudouridine(13)-synthase-TruD	unknown	unknown	gnl\|CDD\|234884
NZ_CP010371.1\|WP_000433154.1\|2938372_2941039_-\|CRISPR-associated-helicase/endonuclease-Cas3	cas3	COG1203_cas3_CAS-I	gnl\|CDD\|182031
NZ_CP010371.1\|WP_000220066.1\|2932674_2933592_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	cas1	cd09719_cas1_CAS-I-E	gnl\|CDD\|274693
NZ_CP010371.1\|WP_001290679.1\|2942206_2943919_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	unknown	unknown	gnl\|CDD\|237402
NZ_CP010371.1\|WP_000064450.1\|2934870_2935962_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	cas7	cd09646_cas7_CAS-I-E	gnl\|CDD\|273843
NZ_CP010371.1\|WP_001173673.1\|2927329_2927935_-\|adenylyl-sulfate-kinase	unknown	unknown	gnl\|CDD\|179661
NZ_CP010371.1\|WP_001090361.1\|2927934_2929362_-\|sulfate-adenylyltransferase-subunit-CysN	unknown	unknown	gnl\|CDD\|235349
NZ_CP010371.1\|WP_001219242.1\|2925243_2925723_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl\|CDD\|178851
NZ_CP010371.1\|WP_001246104.1\|2926956_2927280_-\|DUF3561-family-protein	unknown	unknown	gnl\|CDD\|371891
NZ_CP010371.1\|WP_000281400.1\|2933607_2934207_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	cas6e	cd09664_cas6e_CAS-I-E	gnl\|CDD\|273869
NZ_CP010371.1\|WP_000039850.1\|2941397_2942132_-\|phosphoadenosine-phosphosulfate-reductase	unknown	unknown	gnl\|CDD\|234997
NZ_CP010371.1\|WP_000752800.1\|2935974_2936457_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	cse2gr11	cd09670_cse2gr11_CAS-I-E	gnl\|CDD\|187801
NZ_CP010371.1\|WP_000372108.1\|2929363_2930272_-\|sulfate-adenylyltransferase-subunit-CysD	unknown	unknown	gnl\|CDD\|235375
NZ_CP010371.1\|WP_001295182.1\|2923455_2924217_-\|5'/3'-nucleotidase-SurE	unknown	unknown	gnl\|CDD\|234732

Protein	Function_ID	Function_description	E-value
NZ_CP010371.1\|WP_071532149.1\|2936449_2937934_-\|type-I-E-CRISPR-associated-protein-Cse1/CasA	gnl\|CDD\|236613	PRK09693, PRK09693, Cascade antiviral complex protein; Validated.	0
NZ_CP010371.1\|WP_000246138.1\|2925722_2926433_-\|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase	gnl\|CDD\|234670	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase.	3.26939e-121
NZ_CP010371.1\|WP_000517476.1\|2926451_2926763_-\|cell-division-protein-FtsB	gnl\|CDD\|179156	PRK00888, ftsB, cell division protein FtsB; Reviewed.	5.55235e-62
NZ_CP010371.1\|WP_001334996.1\|2934193_2934868_-\|type-I-E-CRISPR-associated-protein-Cas5/CasD	gnl\|CDD\|273842	TIGR01868, hypothetical_protein, CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is part of the ECOLI subtype CRISPR/Cas locus, and now characterized as part of the CASCADE complex of that system. It shares a small N-terminal homology region with members of several other CRISPR/Cas subtypes, and we view the families that share this region as being Cas5.	2.15381e-103
NZ_CP010371.1\|WP_000490428.1\|2930523_2931561_+\|alkaline-phosphatase-isozyme-conversion-aminopeptidase	gnl\|CDD\|182299	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional.	0
NZ_CP010371.1\|WP_001381369.1\|2932388_2932673_-\|type-I-E-CRISPR-associated-endoribonuclease-Cas2	gnl\|CDD\|236930	PRK11558, PRK11558, putative ssRNA endonuclease; Provisional.	4.76227e-62
NZ_CP010371.1\|WP_000568943.1\|2924197_2925247_-\|tRNA-pseudouridine(13)-synthase-TruD	gnl\|CDD\|234884	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed.	0
NZ_CP010371.1\|WP_000433154.1\|2938372_2941039_-\|CRISPR-associated-helicase/endonuclease-Cas3	gnl\|CDD\|182031	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3.	0
NZ_CP010371.1\|WP_000220066.1\|2932674_2933592_-\|type-I-E-CRISPR-associated-endonuclease-Cas1	gnl\|CDD\|274693	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 protein particular to the ECOLI subtype of CRISPR/Cas system.	2.68794e-159
NZ_CP010371.1\|WP_001290679.1\|2942206_2943919_-\|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit	gnl\|CDD\|237402	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit.	0
NZ_CP010371.1\|WP_000064450.1\|2934870_2935962_-\|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC	gnl\|CDD\|273843	TIGR01869, CRISPR_system_Cascade_subunit_CasC, CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This family is represented by CT1975 of Chlorobium tepidum and is part of the Ecoli subtype of CRISPR/Cas locis. It is designated Cse4, for CRISPR/Cas Subtype Ecoli protein 4.	5.43824e-154
NZ_CP010371.1\|WP_001173673.1\|2927329_2927935_-\|adenylyl-sulfate-kinase	gnl\|CDD\|179661	PRK03846, PRK03846, adenylylsulfate kinase; Provisional.	7.34447e-148
NZ_CP010371.1\|WP_001090361.1\|2927934_2929362_-\|sulfate-adenylyltransferase-subunit-CysN	gnl\|CDD\|235349	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional.	0
NZ_CP010371.1\|WP_001219242.1\|2925243_2925723_-\|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl\|CDD\|178851	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed.	1.56248e-104
NZ_CP010371.1\|WP_001246104.1\|2926956_2927280_-\|DUF3561-family-protein	gnl\|CDD\|371891	pfam12084, DUF3561, Protein of unknown function (DUF3561). This family of proteins is functionally uncharacterized. This protein is found in bacteria. Proteins in this family are about 110 amino acids in length.	1.22003e-52
NZ_CP010371.1\|WP_000281400.1\|2933607_2934207_-\|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE	gnl\|CDD\|273869	TIGR01907, CRISPR_system_Cascade_subunit_CasE, CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.	1.81669e-101
NZ_CP010371.1\|WP_000039850.1\|2941397_2942132_-\|phosphoadenosine-phosphosulfate-reductase	gnl\|CDD\|234997	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase.	2.39575e-137
NZ_CP010371.1\|WP_000752800.1\|2935974_2936457_-\|type-I-E-CRISPR-associated-protein-Cse2/CasB	gnl\|CDD\|187801	cd09670, Cse2_I-E, CRISPR/Cas system-associated protein Cse2. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;.	1.76293e-33
NZ_CP010371.1\|WP_000372108.1\|2929363_2930272_-\|sulfate-adenylyltransferase-subunit-CysD	gnl\|CDD\|235375	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD.	0
NZ_CP010371.1\|WP_001295182.1\|2923455_2924217_-\|5'/3'-nucleotidase-SurE	gnl\|CDD\|234732	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional.	1.92279e-150

>NZ_CP010371.1|WP_000490428.1|2930523_2931561_+|alkaline-phosphatase-isozyme-conversion-aminopeptidase
MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFFPGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIAAHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKNTPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGVKTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSVEATNWNLGNKDGYQQRAKTPAFPAGNSWHDVRLDNHQHIDKALPGRIERRCRDVMRIMLPLVKELAKAS
>NZ_CP010371.1|WP_000372108.1|2929363_2930272_-|sulfate-adenylyltransferase-subunit-CysD
MDQIRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVMLHLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINPFVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDPKNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLERDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVSTTSERQGRVIDRDQAGSMELKKRQGYF
>NZ_CP010371.1|WP_001090361.1|2927934_2929362_-|sulfate-adenylyltransferase-subunit-CysN
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK
>NZ_CP010371.1|WP_001173673.1|2927329_2927935_-|adenylyl-sulfate-kinase
MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTVAGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLVVLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFTGIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS
>NZ_CP010371.1|WP_001246104.1|2926956_2927280_-|DUF3561-family-protein
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
>NZ_CP010371.1|WP_000517476.1|2926451_2926763_-|cell-division-protein-FtsB
MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNAKLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNNR
>NZ_CP010371.1|WP_000246138.1|2925722_2926433_-|2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase
MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGLWHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPEDLALAEFYLTRTIHQENT
>NZ_CP010371.1|WP_001219242.1|2925243_2925723_-|2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK
>NZ_CP010371.1|WP_000568943.1|2924197_2925247_-|tRNA-pseudouridine(13)-synthase-TruD
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGAQRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEELAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
>NZ_CP010371.1|WP_001295182.1|2923455_2924217_-|5'/3'-nucleotidase-SurE
MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNSLTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINVPDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVDEGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW
>NZ_CP010371.1|WP_001381369.1|2932388_2932673_-|type-I-E-CRISPR-associated-endoribonuclease-Cas2
MSMLVVVTENVPPRLRGRLAIWLLEVRAGVYVGDVSAKIREMIWEQIAGLAEEGNVVMAWATNTETGFEFQTFGLNRRTPVDLDGLRLVSFLPV
>NZ_CP010371.1|WP_000220066.1|2932674_2933592_-|type-I-E-CRISPR-associated-endonuclease-Cas1
MTWLPLNPIPLKDRVSMIFLQYGQIDVIDGAFVLIDKTGIRTHIPVGSVACIMLEPGTRVSHAAVRLAAQVGTLLVWVGEAGVRVYASGQPGGARSDKLLYQAKLALDEDLRLKVVRKMFELRFGEPAPARRSVEQLRGIEGSRVRATYALLAKQYGVTWNGRRYDPKDWEKGDTINQCISAATSCLYGVTEAAILAAGYAPAIGFVHTGKPLSFVYDIADIIKFDTVVPKAFEIARRNPGEPDREVRLACRDIFRSSKTLAKLIPLIEDVLAAGEIQPPAPPEDAQPVAIPLPVSLGDAGHRSS
>NZ_CP010371.1|WP_000281400.1|2933607_2934207_-|type-I-E-CRISPR-associated-protein-Cas6/Cse3/CasE
MYLSKVIIARAWSRDLYQLHQGLWHLFPNRPDAARDFLFHVEKRNTPEGCHVLLQSAQMPVSTAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQKRLDSKGNIKRCRVPLIKEAEQIAWLQRKLGNAARVEDVHPISERPQYFSGDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGCGLLSLAPL
>NZ_CP010371.1|WP_001334996.1|2934193_2934868_-|type-I-E-CRISPR-associated-protein-Cas5/CasD
MRSYLILRLAGPMQAWGQPTFEGTRPTGRFPTRSGLLGLLGACLGIQRDDTSSLQALSESVQFAVRCDELILDDRRVSVTGLRDYHTVLGAREDYRGLKSHETIQTWREYLCDASFTVALWLTPHATMVISELEKAVLKPRYTPYLGRRSCPLTHPLFLGTCQASDPQKALLNYEPVGGDIYSEESVTGHHLKFTARDEPMITLPRQFASREWYVIKGGMDVSQ
>NZ_CP010371.1|WP_000064450.1|2934870_2935962_-|type-I-E-CRISPR-associated-protein-Cas7/Cse4/CasC
MSNFINIHVLISHSPSCLNRDDMNMQKDAIFGGKRRVRISSQSLKRAMRKSGYYAQNIGESSLRTIHLAQLRDVLRQKLGERFDQKIIDKTLALLSGKSVDEAEKISADAVTPWVVGEIAWFCEQVAKAEADNLDDKKLLKVLKEDIAAIRVNLQQGVDIALSGRMATSGMMTELGKVDGAMSIAHAITTHQVDSDIDWFTAVDDLQEQGSAHLGTQEFSSGVFYRYANINLAQLQENLGGASREQALEIATHVVHMLATEVPGAKQRTYAAFNPADMVMVNFSDMPLSMANAFEKAVKAKDGFLQPSIQAFNQYWDRVANGYGLNGAAAQFSLSDVDPITAQVKQMPTLEQLKSWVRNNGEA
>NZ_CP010371.1|WP_000752800.1|2935974_2936457_-|type-I-E-CRISPR-associated-protein-Cse2/CasB
MADEIDAMALYRAWQQLDNGSCAQIRRVSEPDELRDIPAFYRLVQPFGWENPRHQQALLRMVFCLSAGKNVIRHQDKKSEQTTGISLGRALANSGRINERRIFQLIRADRTADMVQLRRLLTHAEPVLDWPLMARMLTWWGKRERQQLLEDFVLTTNKNA
>NZ_CP010371.1|WP_071532149.1|2936449_2937934_-|type-I-E-CRISPR-associated-protein-Cse1/CasA
MPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
>NZ_CP010371.1|WP_000433154.1|2938372_2941039_-|CRISPR-associated-helicase/endonuclease-Cas3
MEPFKYICHYWGKSSKSLTKGNDIHLLIYHCLDVAAVADCWWDQSVVLQNTFCRNEMLSKQRVKAWLLFFIALHDIGKFDIRFQYKSAESWLKLNPATPSLNGPSTQMCRKFNHGAAGLYWFNQDSLSEQSLGDFFSFFDAAPHPYESWFPWVEAVTGHHGFILHSQDQDKSRWEMPASLASYAAQDKQAREEWISVLEALFLTPAGLSINDIPPDCSSLLAGFCSLADWLGSWTTTNTFLFNEDAPSDINALRTYFQDRQQDASRVLELSGLVSNKRCYEGVHALLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYGLHTDPVENNSAYPLINWRGVNGAQRFDLLAHPEQLPPRFSIQPEPIYLADMLPDLTMLERMIAAANAGAQACLICNLVDVAQVCYQRLKELNNTQVDIDLFHARFTLNDRREKENRVISNFGKNGKRNVGRILVATQVVEQSLDVDFDWLITQHCPADLLFQRLGRLHRHHRKYRPAGFEIPVATILLPDGEGYGRHEHIYSNVRVMWRTQQHIEELNGASLFFPDAYRQWLDSIYDDAEMDEPEWVGNGMDKFESAECEKRFKARKVLQWAEEYSLQDNDETILAVTRDGEMSLPLLPYVQTSSGKQLLDGQVYEDLSHEQQYEALALNRVNVPFTWKRSFSEVVDEDGLLWLEGKQNLDGWVWQGNSIVITYTGDEGMTRVIPANPK
>NZ_CP010371.1|WP_000039850.1|2941397_2942132_-|phosphoadenosine-phosphosulfate-reductase
MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLKVYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRFFGLKRECGLHEG
>NZ_CP010371.1|WP_001290679.1|2942206_2943919_-|assimilatory-sulfite-reductase-(NADPH)-hemoprotein-subunit
MSEKHPGPLVVEGKLTDAERMKHESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPARPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD

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Crispr_ID: NZ_CP010371_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010371_5

2957834-2958227

Unclear

I-E

Consensus_repeat	Method
GGTTTATCCCCGCTGGCGCGGGGAAC	PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAACAC	CRISPRCasFinder
GGTTTATCCCCGCTGGCGCGGGGAACAC	CRT

6 spacers

The CRISPR arrays of NZ_CP010371_5

>merge|NZ_CP010371|5|2957834-2958227|PILER-CR,CRISPRCasFinder,CRT
GGTTTATCCCCGCTGGCGCGGGGAACTCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCCGGTTTATCCCCGCTGGCGCGGGGAACACCTGTTTTCGCAAATCTATGGACTATTGCTATTCGGTTTATCCCCGCTGGCGCGGGGAACACGGGCGCACGGAATACAAAGCCGTGTATCTGCTCGGTTTATCCCCGCTGGCGCGGGGAACACTGGCTCTGCAACAGCAGCACCCATGACCACGTCGGTTTATCCCCGCTGGCGCGGGGAACACGAAATACTGGTGAGCGTTAATGCCGCAAACACAGGTTTATCCCCGCTGGCGCGGGGAACACATTACGCCTTTTTGCGATTGCCCGGTTTTTGCCGGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP010371|5|2|2957834-2958225|PILER-CR
GGTTTATCCCCGCTGGCGCGGGGAAC	TCGACAGAACGGCCTCAGTAGTCTCGTCAGGCTCC
GGTTTATCCCCGCTGGCGCGGGGAAC	ACCTGTTTTCGCAAATCTATGGACTATTGCTATTC
GGTTTATCCCCGCTGGCGCGGGGAAC	ACGGGCGCACGGAATACAAAGCCGTGTATCTGCTC
GGTTTATCCCCGCTGGCGCGGGGAAC	ACTGGCTCTGCAACAGCAGCACCCATGACCACGTC
GGTTTATCCCCGCTGGCGCGGGGAAC	ACGAAATACTGGTGAGCGTTAATGCCGCAAACACA
GGTTTATCCCCGCTGGCGCGGGGAAC	ACATTACGCCTTTTTGCGATTGCCCGGTTTTTGCC
GGTTTATCCCCGCTGGCGCGGGGAAC

>NZ_CP010371|5|5|2957834-2958227|CRISPRCasFinder
GGTTTATCCCCGCTGGCGCGGGGAACTC	GACAGAACGGCCTCAGTAGTCTCGTCAGGCTCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATACTGGTGAGCGTTAATGCCGCAAACACA
GGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACGCCTTTTTGCGATTGCCCGGTTTTTGCC
GGTTTATCCCCGCTGGCGCGGGGAACAC

>NZ_CP010371|5|2|2957834-2958227|CRT
GGTTTATCCCCGCTGGCGCGGGGAACTC	GACAGAACGGCCTCAGTAGTCTCGTCAGGCTCC
GGTTTATCCCCGCTGGCGCGGGGAACAC	CTGTTTTCGCAAATCTATGGACTATTGCTATTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GGGCGCACGGAATACAAAGCCGTGTATCTGCTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	TGGCTCTGCAACAGCAGCACCCATGACCACGTC
GGTTTATCCCCGCTGGCGCGGGGAACAC	GAAATACTGGTGAGCGTTAATGCCGCAAACACA
GGTTTATCCCCGCTGGCGCGGGGAACAC	ATTACGCCTTTTTGCGATTGCCCGGTTTTTGCC
GGTTTATCCCCGCTGGCGCGGGGAACAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010371.1\|WP_001299652.1\|2949595_2950375_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	unknown	unknown	gnl\|CDD\|224997
NZ_CP010371.1\|WP_001288228.1\|2959376_2959517_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010371.1\|WP_001071648.1\|2963713_2964505_-\|nucleoside-triphosphate-pyrophosphohydrolase	unknown	unknown	gnl\|CDD\|236569
NZ_CP010371.1\|WP_000059306.1\|2951783_2953238_-\|FAD-binding-oxidoreductase	unknown	unknown	gnl\|CDD\|223354
NZ_CP010371.1\|WP_000021334.1\|2953307_2954093_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187605
NZ_CP010371.1\|WP_000109529.1\|2947738_2947999_+\|ferredoxin-family-protein	unknown	unknown	gnl\|CDD\|225289
NZ_CP010371.1\|WP_000036723.1\|2960462_2961761_-\|phosphopyruvate-hydratase	unknown	unknown	gnl\|CDD\|234617
NZ_CP010371.1\|WP_001299097.1\|2948738_2949599_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	unknown	unknown	gnl\|CDD\|224936
NZ_CP010371.1\|WP_000210878.1\|2961848_2963486_-\|CTP-synthase-(glutamine-hydrolyzing)	unknown	unknown	gnl\|CDD\|235437
NZ_CP010371.1\|WP_000581937.1\|2964910_2965159_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	unknown	unknown	gnl\|CDD\|182082
NZ_CP010371.1\|WP_000226815.1\|2965236_2967471_-\|GTP-pyrophosphokinase	unknown	unknown	gnl\|CDD\|182797
NZ_CP010371.1\|WP_001199973.1\|2958566_2959238_-\|7-carboxy-7-deazaguanine-synthase-QueE	unknown	unknown	gnl\|CDD\|275126
NZ_CP010371.1\|WP_039268457.1\|2946476_2947748_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|182194
NZ_CP010371.1\|WP_001130266.1\|2948015_2948591_+\|glycerol-3-phosphate-responsive-antiterminator	unknown	unknown	gnl\|CDD\|224865
NZ_CP010371.1\|WP_000039688.1\|2955715_2957194_+\|kinase	unknown	unknown	gnl\|CDD\|212662
NZ_CP010371.1\|WP_001268460.1\|2959530_2960403_+\|YgcG-family-protein	unknown	unknown	gnl\|CDD\|224429
NZ_CP010371.1\|WP_001164544.1\|2954411_2955689_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|349949
NZ_CP010371.1\|WP_000254738.1\|2964575_2964911_-\|endoribonuclease-MazF	unknown	unknown	gnl\|CDD\|182138
NZ_CP010371.1\|WP_000046812.1\|2967518_2968820_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	unknown	unknown	gnl\|CDD\|237291
NZ_CP010371.1\|WP_000147666.1\|2950352_2951762_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|340929

Protein	Function_ID	Function_description	E-value
NZ_CP010371.1\|WP_001299652.1\|2949595_2950375_-\|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein	gnl\|CDD\|224997	COG2086, FixA, Electron transfer flavoprotein, beta subunit [Energy production and conversion].	1.56693e-62
NZ_CP010371.1\|WP_001268460.1\|2959530_2960403_+\|YgcG-family-protein	gnl\|CDD\|224429	COG1512, COG1512, Beta-propeller domains of methanol dehydrogenase type [General function prediction only].	3.25867e-100
NZ_CP010371.1\|WP_001071648.1\|2963713_2964505_-\|nucleoside-triphosphate-pyrophosphohydrolase	gnl\|CDD\|236569	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed.	8.97718e-160
NZ_CP010371.1\|WP_000059306.1\|2951783_2953238_-\|FAD-binding-oxidoreductase	gnl\|CDD\|223354	COG0277, GlcD, FAD/FMN-containing dehydrogenases [Energy production and conversion].	2.41244e-83
NZ_CP010371.1\|WP_000021334.1\|2953307_2954093_-\|SDR-family-oxidoreductase	gnl\|CDD\|187605	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs. Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction.	7.96451e-139
NZ_CP010371.1\|WP_000109529.1\|2947738_2947999_+\|ferredoxin-family-protein	gnl\|CDD\|225289	COG2440, FixX, Ferredoxin-like protein [Energy production and conversion].	7.43419e-42
NZ_CP010371.1\|WP_000036723.1\|2960462_2961761_-\|phosphopyruvate-hydratase	gnl\|CDD\|234617	PRK00077, eno, enolase; Provisional.	0
NZ_CP010371.1\|WP_001299097.1\|2948738_2949599_-\|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein	gnl\|CDD\|224936	COG2025, FixB, Electron transfer flavoprotein, alpha subunit [Energy production and conversion].	7.42017e-90
NZ_CP010371.1\|WP_000210878.1\|2961848_2963486_-\|CTP-synthase-(glutamine-hydrolyzing)	gnl\|CDD\|235437	PRK05380, pyrG, CTP synthetase; Validated.	0
NZ_CP010371.1\|WP_000046812.1\|2967518_2968820_-\|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD	gnl\|CDD\|237291	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD.	0
NZ_CP010371.1\|WP_000226815.1\|2965236_2967471_-\|GTP-pyrophosphokinase	gnl\|CDD\|182797	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional.	0
NZ_CP010371.1\|WP_001199973.1\|2958566_2959238_-\|7-carboxy-7-deazaguanine-synthase-QueE	gnl\|CDD\|275126	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE. Members of this radical SAM domain protein family appear to be the E. coli form of the queuosine biosynthesis protein QueE. QueE is involved in making preQ0 (7-cyano-7-deazaquanine), a precursor of both the bacterial/eukaryotic modified tRNA base queuosine and the archaeal modified base archaeosine. Members occur in species that lack known forms of QueE but usually are not found in queuosine biosynthesis operons. Members of this family tend to form bi-directional best hit matches to members of known (TIGR03365) and putative (TIGR03963) QueE families from other lineages.	3.98248e-155
NZ_CP010371.1\|WP_039268457.1\|2946476_2947748_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|182194	PRK10015, PRK10015, oxidoreductase; Provisional.	6.09157e-124
NZ_CP010371.1\|WP_001130266.1\|2948015_2948591_+\|glycerol-3-phosphate-responsive-antiterminator	gnl\|CDD\|224865	COG1954, GlpP, Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription].	5.83077e-88
NZ_CP010371.1\|WP_000039688.1\|2955715_2957194_+\|kinase	gnl\|CDD\|212662	cd07779, FGGY_ygcE_like, uncharacterized ygcE-like proteins. This subfamily consists of uncharacterized hypothetical bacterial proteins with similarity to Escherichia coli sugar kinase ygcE , whose functional roles are not yet clear. Escherichia coli ygcE is recognized by this model, but is not present in the alignment as it contains a deletion relative to other members of the group. These proteins belong to the FGGY family of carbohydrate kinases, the monomers of which contain two large domains, which are separated by a deep cleft that forms the active site. This model includes both the N-terminal domain, which adopts a ribonuclease H-like fold, and the structurally related C-terminal domain.	1.27376e-109
NZ_CP010371.1\|WP_000581937.1\|2964910_2965159_-\|type-II-toxin-antitoxin-system-antitoxin-MazE	gnl\|CDD\|182082	PRK09798, PRK09798, MazF-MazE toxin-antitoxin system antitoxin MazE.	6.19513e-48
NZ_CP010371.1\|WP_001164544.1\|2954411_2955689_+\|MFS-transporter	gnl\|CDD\|349949	cd06174, MFS, Major Facilitator Superfamily. The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.	1.60446e-29
NZ_CP010371.1\|WP_000254738.1\|2964575_2964911_-\|endoribonuclease-MazF	gnl\|CDD\|182138	PRK09907, PRK09907, endoribonuclease MazF.	1.17475e-74
NZ_CP010371.1\|WP_000147666.1\|2950352_2951762_-\|MFS-transporter	gnl\|CDD\|340929	cd17371, MFS_MucK, Cis,cis-muconate transport protein and similar proteins of the Major Facilitator Superfamily. This subfamily is composed of Acinetobacter sp. Cis,cis-muconate transport protein (MucK), Escherichia coli putative sialic acid transporter 1, and similar proteins. MucK functions in the uptake of muconate and allows Acinetobacter calcoaceticus ADP1 (BD413) to grow on exogenous cis,cis-muconate as the sole carbon source. The MucK subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	8.50431e-51

>NZ_CP010371.1|WP_000039688.1|2955715_2957194_+|kinase
MSKKYIIGIDGGSQSTKVVMYDLEGNVVCEGKGLLQPMHTPDADTAEHPDDDLWASLCFAGHDLMSQFAGNKEDIVGIGLGSIRCCRALLKADGTPAAPLISWQDARVTRPYEHTNPDVAYVTSFSGYLTHRLTGEFKDNIANYFGQWPVDYKSWAWSEDAAVMDKFNIPRHMLFDVQMPGTVLGHITPQAALATHFPAGLPVVCTTSDKPVEALGAGLLDDETAVISLGTYIALMMNGKALPKDPVAYWPIMSSIPQTLLYEGYGIRKGMWTVSWLRDMLGESLIQDARAQDLSPEDLLNKKASCVPPGCNGLMTVLDWLTNPWEPYKRGIMIGFDSSMDYAWIYRSILESVALTLKNNYDNMCNEMNHFAKHVIITGGGSNSDLFMQIFADVFNLPARRNAINGCASLGAAINTAVGLGLYPDYATAVDNMVRVKDIFIPIESNAKRYDAMNKGIFKDLTKHTDVILKKSYEVMHGELGNVDSIQSWSNA
>NZ_CP010371.1|WP_001164544.1|2954411_2955689_+|MFS-transporter
MQHNSYRRWITLAIISFSGGVSFDLAYLRYIYQIPMAKFMGFSNTEIGLIMSTFGIAAIILYAPSGVIADKFSHRKMITSAMIITGLLGLLMATYPPLWVMLCIQIAFAITTILMLWSVSIKAASLLGDHSEQGKIMGWMEGLRGVGVMSLAVFTMWVFSRFAPDDSTSLKTVIIIYSVVYILLGILCWFFVSDNNNLRSANNEEKQSFQLSDILAVLRISTTWYCSMVIFGVFTIYAILSYSTNYLTEMYGMSLVAASYMGIVINKIFRALCGPLGGIITTYSKVKSPTRVIQILSVLGLLTLTALLVTNSNPQSVAMGIGLILLLGFTCYASRGLYWACPGEARTPSYIMGTTVGICSVIGFLPDVFVYPIIGHWQDTLPAAEAYRNMWLMGMAALGMVIVFTFLLFQKIRTADSAPAMASSK
>NZ_CP010371.1|WP_000021334.1|2953307_2954093_-|SDR-family-oxidoreductase
MSIESLNAFSMDFFSLKGKTAIVTGGNSGLGQAFAMALAKAGANIFIPSFVKDNGETKEMIEKQGVEVDFMQVGITAEGAPQKIIAACCERFGTVDILVNNAGICKLNKVLDFGRADWDPMIDVNLTAAFELSYEAAKIMIPQKSGKIINICSLFSYLGGQWSPAYSATKHALAGFTKAYCDELGQYNIQVNGIAPGYYATDITLATRSNPETNQRVLDHIPANRWGDTQDLMGAAVFLASPASNYVNGHLLVVDGGYLVR
>NZ_CP010371.1|WP_000059306.1|2951783_2953238_-|FAD-binding-oxidoreductase
MSLSRAAIVDQLKEIVGADRVITDETVLKKNSIDRFRKFPDIHGIYTLPIPAAVVKLGSTEQVSRVLNFMNAHKINGVPRTGASATEGGLETVVENSVVLDGSAMNQIINIDIENMQATAQCGVPLEVLENALREKGYTTGHSPQSKPLAQMGGLVATRSIGQFSTLYGAIEDMVVGLEAVLADGTVTRIKNVPRRAAGPDIRHIIIGNEGALCYITEVTVKIFKFTPENNLFYGYILEDMKTGFNILREIMVEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVTGEGIAEIVARYPQCQRVDSKLIETWFNNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDITMLGGHSSHSYQNGTNMYFVYDYNIVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALLEGLKKQFDPNGIMNTGTIYPIEK
>NZ_CP010371.1|WP_000147666.1|2950352_2951762_-|MFS-transporter
MTGRCLFGFSGEKPFLLPDNEGVKMNTSPVRMDDLPLNRFHCRIAALTFGAHLTDGYVLGVIGYAIIQLTPAMQLTPFMAGMIGGSALLGLFLGSLVLGWISDHIGRQKIFTFSFLLITLASFLQFFATTPEHLIGLRILIGIGLGGDYSVGHTLLAEFSPRRHRGILLGAFSVVWTVGYVLASIAGHHFISENPEAWRWLLASAALPALLITLLRWGTPESPRWLLRQGRFAEAHAIVHRYFGPHVLLGDEVVTATHKHIKTLFSSRYWRRTAFNSVFFVCLVIPWFVIYTWLPTIAQTIGLEDALTASLMLNALLIVGALLGLVLTHLLAHRKFLLGSFLLLAATLVVMACLPSGSSLTLLLFVLFSTTISAVSNLVGILPAESFPTDIRSLGVGFATAMSRLGAAVSTGLLPWVLAQWGMQVTLLLLATVLLVGFVVTWLWAPETKALPLVAAGNVGGANEHSVSV
>NZ_CP010371.1|WP_001299652.1|2949595_2950375_-|electron-transfer-flavoprotein-subunit-beta/FixA-family-protein
MNILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQAAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEFVARHIAEWQHQNPLDLIITGCQSSEGQNGQTPFLLAEMLGWPCFTQVERFTLDALFITLEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAMQCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP
>NZ_CP010371.1|WP_001299097.1|2948738_2949599_-|electron-transfer-flavoprotein-subunit-alpha/FixB-family-protein
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHWGNALTATLQTEKRPLCLSLARQAGAAKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEALVTNIHADCQ
>NZ_CP010371.1|WP_001130266.1|2948015_2948591_+|glycerol-3-phosphate-responsive-antiterminator
MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTISNIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGFFCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVCDEEDARNAINAGVVALSTTNTGVWTLAKKLL
>NZ_CP010371.1|WP_000109529.1|2947738_2947999_+|ferredoxin-family-protein
MSVARNLWRVADAPHIVPADSVERQTAERLINACPAGLFSLTPEGNLRIDYRSCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG
>NZ_CP010371.1|WP_039268457.1|2946476_2947748_+|FAD-dependent-oxidoreductase
MEDDCDIIIIGAGIAGTACALRCARADLSVLLLERAEIPGSKNLSGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRARFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVLAERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGRICDDLPGGAFLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVPEGGLHSMPVQYAGNGWLLVGDALRSCVNTGISVRGMDMALTGAQAAAQTLISACQHREPQNLFPLYHHNVERSLLWDVLQRYQHVPALLQRPGWYRTWPALMQDISRDLWDQGDKPVPPLRQLFWHHLRRHGLWHLAGDVIRSLRCL
>NZ_CP010371.1|WP_001199973.1|2958566_2959238_-|7-carboxy-7-deazaguanine-synthase-QueE
MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTWEKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLLPLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYEVLSQALERANEIKHPVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHKYLNIA
>NZ_CP010371.1|WP_001288228.1|2959376_2959517_+|hypothetical-protein
MSEENKENGFNHVKTFTKIIFIFSVLVFNDNEYKITDAAVNLFIQI
>NZ_CP010371.1|WP_001268460.1|2959530_2960403_+|YgcG-family-protein
MRYFILMFTFVCSFVAAQPTIVPQLQQQVTDLTSSLNSQEKKELTHKLESIFNNTQVQIAVLIVPTTKDETIEQYATRVFDNWRLGDAKRNDGILIVVAWSDRTVRIQVGYGLEEKVTDALAGDIIRSNMIPAFKQQKLAKGLELAINALNNQLTSQHQYPTNPSESESASSSDHYYFAIFWVFAVMFFPFWFFHQGSNFCRACKSGVCISAIYLLDLFLFSDKIFSIAVFSFFFTFTIFMVFTCLCVLQKRASGRSYHSDNSGSAGGSDSGGFSGGGGSSGGGGASGRW
>NZ_CP010371.1|WP_000036723.1|2960462_2961761_-|phosphopyruvate-hydratase
MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTGSREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTENKSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHADNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGSNAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQIKTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA
>NZ_CP010371.1|WP_000210878.1|2961848_2963486_-|CTP-synthase-(glutamine-hydrolyzing)
MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPYINVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRKERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQMAVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPANERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEWEQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVETRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARHVANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVDDSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK
>NZ_CP010371.1|WP_001071648.1|2963713_2964505_-|nucleoside-triphosphate-pyrophosphohydrolase
MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFADSSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL
>NZ_CP010371.1|WP_000254738.1|2964575_2964911_-|endoribonuclease-MazF
MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTGMCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKSIAWRARGATKKGTVAPEELQLIKAKINVLIG
>NZ_CP010371.1|WP_000581937.1|2964910_2965159_-|type-II-toxin-antitoxin-system-antitoxin-MazE
MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLIIEPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW
>NZ_CP010371.1|WP_000226815.1|2965236_2967471_-|GTP-pyrophosphokinase
MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQQTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGEMLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVPFTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAGRQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNKPSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGFITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRDITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARRLHGS
>NZ_CP010371.1|WP_000046812.1|2967518_2968820_-|23S-rRNA-(uracil(1939)-C(5))-methyltransferase-RlmD
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGLLPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQRSKSAALARLMKHDVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREKLERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK

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Crispr_ID: NZ_CP010371_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP010371_6

4580721-4580868

Orphan

Consensus_repeat	Method
CGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP010371_6

>merge|NZ_CP010371|6|4580721-4580868|CRISPRCasFinder
CGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCATGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCGCGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

>NZ_CP010371|6|6|4580721-4580868|CRISPRCasFinder
CGTCTTATCAGGCCTACGAGTTCGGTGCTGTGTAGGTCGGATAAGGCGTTCA	TGCCGCATCCGACAATAACAGCATTGCCTGATGCGACGCTTGCG
CGTCTTATCAGGCCTACGAGTTCAGTGCTGTGTAGGTCGGATAAGGCGTTCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP010371.1\|WP_000079655.1\|4576000_4577197_+\|DUF898-domain-containing-protein	unknown	unknown	gnl\|CDD\|226719
NZ_CP010371.1\|WP_000256681.1\|4570720_4571314_+\|TetR/AcrR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224228
NZ_CP010371.1\|WP_000255944.1\|4596720_4597743_-\|IS21-like-element-IS100-family-transposase	unknown	unknown	gnl\|CDD\|226950
NZ_CP010371.1\|WP_001059412.1\|4575312_4575816_-\|GNAT-family-N-acetyltransferase	unknown	unknown	gnl\|CDD\|366181
NZ_CP010371.1\|WP_000500689.1\|4569936_4570650_-\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|183714
NZ_CP010371.1\|WP_000012907.1\|4573684_4574689_-\|ornithine-carbamoyltransferase	unknown	unknown	gnl\|CDD\|179587
NZ_CP010371.1\|WP_000002953.1\|4574850_4575267_+\|ribonuclease-E-inhibitor-RraB	unknown	unknown	gnl\|CDD\|236876
NZ_CP010371.1\|WP_000036448.1\|4572033_4573629_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP010371.1\|WP_001295681.1\|4583782_4584865_+\|LPS-export-ABC-transporter-permease-LptG	unknown	unknown	gnl\|CDD\|237900
NZ_CP010371.1\|WP_000018562.1\|4598776_4600690_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|226350
NZ_CP010371.1\|WP_000772679.1\|4588121_4589387_+\|integrase-arm-type-DNA-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|170049
NZ_CP010371.1\|WP_001326836.1\|4571458_4571911_+\|toxin-antitoxin-biofilm-protein-TabA	unknown	unknown	gnl\|CDD\|225345
NZ_CP010371.1\|WP_000786399.1\|4580107_4580551_-\|DNA-polymerase-III-subunit-chi	unknown	unknown	gnl\|CDD\|235581
NZ_CP010371.1\|WP_000584107.1\|4582682_4583783_+\|LPS-export-ABC-transporter-permease-LptF	unknown	unknown	gnl\|CDD\|185075
NZ_CP010371.1\|WP_001254928.1\|4593599_4594751_+\|IS30-like-element-IS30-family-transposase	unknown	unknown	gnl\|CDD\|225382
NZ_CP010371.1\|WP_001323403.1\|4595941_4596721_-\|AAA-family-ATPase	unknown	unknown	gnl\|CDD\|181681
NZ_CP010371.1\|WP_001352285.1\|4586658_4587678_-\|NADPH-dependent-aldehyde-reductase-Ahr	unknown	unknown	gnl\|CDD\|176186
NZ_CP010371.1\|WP_000397144.1\|4580904_4582416_-\|leucyl-aminopeptidase	unknown	unknown	gnl\|CDD\|234863
NZ_CP010371.1\|WP_032199669.1\|4585025_4586531_-\|DUF853-domain-containing-protein	unknown	unknown	gnl\|CDD\|283518
NZ_CP010371.1\|WP_000416382.1\|4577252_4580108_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582

Protein	Function_ID	Function_description	E-value
NZ_CP010371.1\|WP_000079655.1\|4576000_4577197_+\|DUF898-domain-containing-protein	gnl\|CDD\|226719	COG4269, COG4269, Predicted membrane protein [Function unknown].	4.28094e-150
NZ_CP010371.1\|WP_000256681.1\|4570720_4571314_+\|TetR/AcrR-family-transcriptional-regulator	gnl\|CDD\|224228	COG1309, AcrR, Transcriptional regulator [Transcription].	1.07846e-09
NZ_CP010371.1\|WP_000255944.1\|4596720_4597743_-\|IS21-like-element-IS100-family-transposase	gnl\|CDD\|226950	COG4584, COG4584, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	3.49492e-79
NZ_CP010371.1\|WP_001059412.1\|4575312_4575816_-\|GNAT-family-N-acetyltransferase	gnl\|CDD\|366181	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family. This family contains proteins with N-acetyltransferase functions such as Elp3-related proteins.	7.73712e-19
NZ_CP010371.1\|WP_000500689.1\|4569936_4570650_-\|SDR-family-oxidoreductase	gnl\|CDD\|183714	PRK12742, PRK12742, SDR family oxidoreductase.	1.67397e-148
NZ_CP010371.1\|WP_000012907.1\|4573684_4574689_-\|ornithine-carbamoyltransferase	gnl\|CDD\|179587	PRK03515, PRK03515, ornithine carbamoyltransferase subunit I; Provisional.	0
NZ_CP010371.1\|WP_000002953.1\|4574850_4575267_+\|ribonuclease-E-inhibitor-RraB	gnl\|CDD\|236876	PRK11191, PRK11191, ribonuclease E inhibitor RraB.	4.50628e-69
NZ_CP010371.1\|WP_001326836.1\|4571458_4571911_+\|toxin-antitoxin-biofilm-protein-TabA	gnl\|CDD\|225345	COG2731, EbgC, Beta-galactosidase, beta subunit [Carbohydrate transport and metabolism].	3.64234e-69
NZ_CP010371.1\|WP_001295681.1\|4583782_4584865_+\|LPS-export-ABC-transporter-permease-LptG	gnl\|CDD\|237900	PRK15071, PRK15071, lipopolysaccharide ABC transporter permease; Provisional.	0
NZ_CP010371.1\|WP_000772679.1\|4588121_4589387_+\|integrase-arm-type-DNA-binding-domain-containing-protein	gnl\|CDD\|170049	PRK09692, PRK09692, integrase; Provisional.	2.15714e-82
NZ_CP010371.1\|WP_000018562.1\|4598776_4600690_-\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|226350	COG3829, RocR, Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains [Transcription / Signal transduction mechanisms].	6.20119e-148
NZ_CP010371.1\|WP_000786399.1\|4580107_4580551_-\|DNA-polymerase-III-subunit-chi	gnl\|CDD\|235581	PRK05728, PRK05728, DNA polymerase III subunit chi; Validated.	5.53743e-66
NZ_CP010371.1\|WP_000584107.1\|4582682_4583783_+\|LPS-export-ABC-transporter-permease-LptF	gnl\|CDD\|185075	PRK15120, PRK15120, lipopolysaccharide ABC transporter permease LptF; Provisional.	0
NZ_CP010371.1\|WP_001254928.1\|4593599_4594751_+\|IS30-like-element-IS30-family-transposase	gnl\|CDD\|225382	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair].	2.87022e-136
NZ_CP010371.1\|WP_001323403.1\|4595941_4596721_-\|AAA-family-ATPase	gnl\|CDD\|181681	PRK09183, PRK09183, transposase/IS protein; Provisional.	3.28787e-178
NZ_CP010371.1\|WP_001352285.1\|4586658_4587678_-\|NADPH-dependent-aldehyde-reductase-Ahr	gnl\|CDD\|176186	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines.	2.55381e-168
NZ_CP010371.1\|WP_000397144.1\|4580904_4582416_-\|leucyl-aminopeptidase	gnl\|CDD\|234863	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional.	0
NZ_CP010371.1\|WP_032199669.1\|4585025_4586531_-\|DUF853-domain-containing-protein	gnl\|CDD\|283518	pfam05872, DUF853, Bacterial protein of unknown function (DUF853). This family consists of several bacterial proteins of unknown function. BMEI1370 is thought to be an ATPase.	0
NZ_CP010371.1\|WP_000416382.1\|4577252_4580108_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0

>NZ_CP010371.1|WP_000786399.1|4580107_4580551_-|DNA-polymerase-III-subunit-chi
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK
>NZ_CP010371.1|WP_000416382.1|4577252_4580108_-|valine--tRNA-ligase
MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRLYKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLVVATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCVKITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQKLERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKPAVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRNEDEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSGFDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPLDMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALASTGRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFNQTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLVTVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTEWLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVLPADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEGFVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL
>NZ_CP010371.1|WP_000079655.1|4576000_4577197_+|DUF898-domain-containing-protein
MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLPWALMKCKRYLYANMEVNGQRFSYGITGGNVFVSCLVFVFFYFAILMTVSADMPLVGCVLTLSLLVLLIFMAAKGLRYQALMTSLNGVRFSFNCSLKGFWWVTFFLPILMAIGMGAVFFISTKMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDTTYCIKYAILAFLALLPFLAVAGYIIFDQILNAYDSSVYANDDIENLQQFMEMQRKMIIAQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISGITGGLAYPLLKIWMIDWQAKNTYLLGDLDDLPLINKEEQPDKGFLARISRGIMPSLPFL
>NZ_CP010371.1|WP_001059412.1|4575312_4575816_-|GNAT-family-N-acetyltransferase
MNNIAPQSPVMRRLTQQDNPAIARVIRQVSAEYGLTADKGYTVADPNLDELYQVYSQPGHAYWVVEFDGEVVGGGGIAPLAGSESDICELQKMYFLPAIRGKGLAKKLALMAMEQAREMGFKRCYLETTAFLKEAIALYEHLGFEHIDYALGCTGHVDCEVRMLREL
>NZ_CP010371.1|WP_000002953.1|4574850_4575267_+|ribonuclease-E-inhibitor-RraB
MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLETLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAEKFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH
>NZ_CP010371.1|WP_000012907.1|4573684_4574689_-|ornithine-carbamoyltransferase
MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLTGKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYDGIQYRGYGQEIVETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLVYAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLPAFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
>NZ_CP010371.1|WP_000036448.1|4572033_4573629_+|hypothetical-protein
MSKISDLNYSQHITLADNFKQKSEVLNTWRVGMNNFARNAEGQDNTRNILDPKTFLEFLVKIFTLGYVDFSNRSNEAGRNMMAHIESSSYIKNNDGSEIMKFVMNNPEGERADLSKVEIEITLSTITTMGTRQGHTAIIFQQPDGSTNRYEGKSFERKDESSLHLITNKVLACYQREANKEVALLLNNHQLNWKDAIDYNELLEKPLASTLEKIKKEHLLLMPHVCDDTIPYLLGEGGILEEINGLKTLHDTKIDSGTEGNDEINNIKINLSNILIDSLDDAKINLEKVIDSMLETFFKLPYINDVKILEWCFNQSMQYSDDTTKIKHARSVIDHIDFNCDQSKIAETLFFNLNKEPYKNSPELQELIWEKLVVYVNDFNLSNQEKSRLILRLFDDVKLVFDKVPLSILVNDIFLKDFFMKQPDFAKWYFYQLLKSYEGEQMYLNELGYVYGDEEKTKEIVNKLPGYVVKIFEEKIDNELKIRTRMMEILRDEQINIYEYINEKQLEKLNPQGNLRIAIEKFGWNNKPITA
>NZ_CP010371.1|WP_001326836.1|4571458_4571911_+|toxin-antitoxin-biofilm-protein-TabA
MIIGNIHNLQPWLPQELRQAIEHIKAHVTPETPKGKHDIEGNRLFYLISEDMTEPYEARRAEYHARYLDIQIVLRGQEGMTFSTQPAGTPDTDWLADKDIAFLPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPAQVRKAVVKMLMA
>NZ_CP010371.1|WP_000256681.1|4570720_4571314_+|TetR/AcrR-family-transcriptional-regulator
MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTDYLGINPPSLYAAFGSKVGLFSRVLNEYVGTEAIPLADILRDDRPVGECLVEVLKEAARRYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFMSTVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE
>NZ_CP010371.1|WP_000500689.1|4569936_4570650_-|SDR-family-oxidoreductase
MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAEHLAQETGATAVFTDSADRDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRLFKINIHAPYHASVEAARQMPEGGRILIIGSVNSDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGPMRDMLHSLMAIKRHGQPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>NZ_CP010371.1|WP_000397144.1|4580904_4582416_-|leucyl-aminopeptidase
MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYISALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLNDTGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFDQLKTNKSEPRRPLRKMVFNVPTRRELTSGERAIQHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDSGGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITAGCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE
>NZ_CP010371.1|WP_000584107.1|4582682_4583783_+|LPS-export-ABC-transporter-permease-LptF
MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIPANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAAMILAVFTAIVAAINVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLFIESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTALLRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTVFMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTVNLIYLALAIVLNLWDTVPVRRLRASFSRKGAV
>NZ_CP010371.1|WP_001295681.1|4583782_4584865_+|LPS-export-ABC-transporter-permease-LptG
MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQGSYDALGAGMYTLLSVPKDVQIFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQVALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNFVYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPKQITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMWSKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYGIPPIIGALLPSASFFLISLWLLMRKS
>NZ_CP010371.1|WP_032199669.1|4585025_4586531_-|DUF853-domain-containing-protein
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASVGAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRTFTPKDQKAVKAAAQTMRVNPAFDTEKAIQKLGTGEALISFLNAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEMLQKGFQASTEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGGRRR
>NZ_CP010371.1|WP_001352285.1|4586658_4587678_-|NADPH-dependent-aldehyde-reductase-Ahr
MSMIRSYAAKEAGGELEVYEYDPGELRPQDIEVQVDYCGICHSDLSMIDNEWGFSQYPLIAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDACISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKPLLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVNSRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLIAGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIQHVRDGKARYRVVLKADF
>NZ_CP010371.1|WP_000772679.1|4588121_4589387_+|integrase-arm-type-DNA-binding-domain-containing-protein
MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRDEAKKPLVQGIDPKAEKKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRIPAKREEIKGVRYSYRGMKMKEEHIVPLSRKAMVLLEQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGYDTKTEVCGHGFRTMARGAMGESGLWSDDAIERQLSHSERNNVRAAYIHTSEHLDERRLMIQWWADYLDELNNNYITPFDFAKIQKNY
>NZ_CP010371.1|WP_001254928.1|4593599_4594751_+|IS30-like-element-IS30-family-transposase
MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRGRRYYKAVDANNRANRMAKRPKPCLLDQNLPLRKLVLEKLEMKWSPEQISGWLRRTKPRQKTLRISPETIYKTLYFRSREALHHLNIQHLRRSHSLRHGRRHTRKGERGTINIVNGTPIHERSRNIDNRRSLGHWEGDLVSGTKNSHIATLVDRKSRYTIILRLRGKDSVSVNQALTDKFLSLPSELRKSLTWDRGMELARHLEFTVSTGVKVYFCDPQSPWQRGTNENTNELIRQYFPKKTCLAQYTQHELDLVAAQLNNRPRKTLKFKTPKEIIERGVALTD
>NZ_CP010371.1|WP_001323403.1|4595941_4596721_-|AAA-family-ATPase
MMELQHQRLMVLAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE
>NZ_CP010371.1|WP_000255944.1|4596720_4597743_-|IS21-like-element-IS100-family-transposase
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSMLALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>NZ_CP010371.1|WP_000018562.1|4598776_4600690_-|sigma-54-dependent-Fis-family-transcriptional-regulator
MSHKTLPNLALITPYPALAAVVTEQCTGIFNCHVFHGSLEKAAGIARNLDPDFYDIIISRGGTADYIDRVTKIPVVRILTSALDLLKSLTPLKKHPHKIAFFNYQNYLSDVNLVATALEVEIEEFIFLSHADMVDKLKKCRTRNFQTVAGGLPVSDTAEHYEMQGILIENGLESVNSALREAMAIVETTRRKQQDMARLEIILSSITEGIIVTNENNEIQIFNKSAENIFGLMASQVIGKPVDTVIKNTRINQVLLTKSAEIREIMDLDNTSIITSRVPIFRGTQCIGVVCSFTDTPQIQKVERIIRGKLMKKGFTARYRFEHILTQNKHMESVIHLAKIYANTHSPVMIYGESGTGKELFAQSIHNQSQCHRGPFVAINCAAIPETLLESELFGYEGGSFTGARREGKEGLIELAHQGTLFLDEIGELPLPIQSRLLRVLQEYEIMRVGGKDIIPVDVRIIGATNRSLEKMAEEGSFRGDLYYRLNVLPLMVPPLREREGDVRFLAEHFLEKSGCGHKLAQFIALFSTYNWPGNVRELNFIIERLALLSAGFPNASLFEILNLTGFNALKSCNTSQTNGRIVADLSKGQLKAVIKDLERQIIAFYMDLFEQDQEKVAAHLGISKMSLWRKYNQMDR

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP010371_4	4.7\|2932039\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932039-2932070	32	NC_021229	Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919	65474-65505	5	0.844
NZ_CP010371_4	4.7\|2932039\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932039-2932070	32	NZ_CP017422	Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence	208287-208318	6	0.812
NZ_CP010371_4	4.5\|2931917\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2931917-2931948	32	MF351863	Synechococcus phage Bellamy, complete genome	123998-124029	7	0.781
NZ_CP010371_4	4.6\|2931978\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2931978-2932009	32	MK416018	Klebsiella phage ST147-VIM1phi7.1, complete genome	24790-24821	7	0.781
NZ_CP010371_4	4.1\|2931673\|32\|NZ_CP010371\|CRISPRCasFinder,CRT	2931673-2931704	32	NZ_AP018516	Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence	48296-48327	8	0.75
NZ_CP010371_4	4.7\|2932039\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932039-2932070	32	MK113951	Phage 5P_3, complete genome	11967-11998	8	0.75
NZ_CP010371_4	4.7\|2932039\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932039-2932070	32	AP017924	Ralstonia phage RP12 DNA, complete genome	11643-11674	8	0.75
NZ_CP010371_5	5.10\|2958045\|33\|NZ_CP010371\|CRISPRCasFinder,CRT	2958045-2958077	33	NZ_CP007129	Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence	755172-755204	8	0.758
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229083-229131	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229184-229232	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229285-229333	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239577-239625	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239678-239726	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239779-239827	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230489-230537	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230590-230638	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230691-230739	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211459-211507	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211560-211608	9	0.816
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211661-211709	9	0.816
NZ_CP010371_4	4.6\|2931978\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2931978-2932009	32	NZ_CP050104	Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence	1143591-1143622	9	0.719
NZ_CP010371_4	4.6\|2931978\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2931978-2932009	32	NZ_CP025507	Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence	891493-891524	9	0.719
NZ_CP010371_4	4.6\|2931978\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2931978-2932009	32	NZ_CP050109	Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence	1143594-1143625	9	0.719
NZ_CP010371_4	4.6\|2931978\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2931978-2932009	32	NZ_CP022666	Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence	315030-315061	9	0.719
NZ_CP010371_4	4.6\|2931978\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2931978-2932009	32	NZ_CP050086	Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence	1123532-1123563	9	0.719
NZ_CP010371_1	1.1\|476090\|59\|NZ_CP010371\|CRISPRCasFinder	476090-476148	59	MT230312	Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence	97-155	10	0.831
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	229386-229434	10	0.796
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	239880-239928	10	0.796
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	230792-230840	10	0.796
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	211762-211810	10	0.796
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP044147	Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2	7442-7490	10	0.796
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	CP044351	Escherichia coli strain 194195 plasmid p194195_1, complete sequence	84266-84314	10	0.796
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	386508-386556	10	0.796
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14196-14244	10	0.796
NZ_CP010371_4	4.7\|2932039\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932039-2932070	32	NC_002580	Propionibacterium freudenreichii plasmid p545, complete sequence	2898-2929	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NZ_CP028970	Aminobacter sp. MSH1 plasmid pUSP2, complete sequence	156123-156154	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NZ_CP053984	Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence	21888-21919	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NC_010935	Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence	28766-28797	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	JX469826	Uncultured bacterium plasmid pB12, complete sequence	11283-11314	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	JN106171	Uncultured bacterium plasmid pAKD26, complete sequence	11289-11320	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NC_016968	Comamonas testosteroni plasmid pTB30, complete sequence	11287-11318	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NC_016978	Comamonas testosteroni plasmid pI2, complete sequence	11272-11303	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NZ_CP017760	Cupriavidus necator strain NH9 plasmid pENH91, complete sequence	67078-67109	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NZ_CP053554	Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence	4235-4266	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NC_019263	Delftia acidovorans plasmid pLME1, complete sequence	11288-11319	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NC_019264	Delftia acidovorans plasmid pNB8c, complete sequence	11288-11319	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NC_019283	Delftia acidovorans plasmid pC1-1, complete sequence	11288-11319	10	0.688
NZ_CP010371_4	4.8\|2932100\|32\|NZ_CP010371\|CRISPRCasFinder,CRT,PILER-CR	2932100-2932131	32	NC_006830	Achromobacter xylosoxidans A8 plasmid pA81, complete sequence	11350-11381	10	0.688
NZ_CP010371_1	1.1\|476090\|59\|NZ_CP010371\|CRISPRCasFinder	476090-476148	59	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	40375-40433	11	0.814
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194003-194051	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194096-194144	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194282-194330	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204497-204545	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204590-204638	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204776-204824	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195331-195379	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195424-195472	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195610-195658	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176286-176334	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176379-176427	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176565-176613	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27282-27330	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP010208	Escherichia coli strain M11 plasmid B, complete sequence	27381-27429	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	51834-51882	11	0.776
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023209	Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence	19389-19437	11	0.776
NZ_CP010371_5	5.11\|2958106\|33\|NZ_CP010371\|CRISPRCasFinder,CRT	2958106-2958138	33	MF158039	Shigella phage Sf12, complete genome	4974-5006	11	0.667
NZ_CP010371_5	5.11\|2958106\|33\|NZ_CP010371\|CRISPRCasFinder,CRT	2958106-2958138	33	MF158042	Shigella phage Sd1, complete genome	937-969	11	0.667
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211730-211778	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	211930-211978	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053606	Escherichia coli strain NEB_Turbo plasmid F', complete sequence	194189-194237	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222224-222272	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	222424-222472	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053608	Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence	204683-204731	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213058-213106	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	213258-213306	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014271	Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence	195517-195565	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194013-194061	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	194213-194261	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP014273	Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence	176472-176520	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	11511-11559	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	397088-397136	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	404133-404181	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	27994-28042	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023207	Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence	31299-31347	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	33059-33107	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	141016-141064	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	MF374379	Escherichia phage DN1, complete genome	31158-31206	12	0.755
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP048307	Escherichia coli strain 9 plasmid p009_C, complete sequence	14105-14153	13	0.735
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023208	Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence	6859-6907	13	0.735
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NC_049343	Escherichia phage 500465-2, complete genome	31797-31845	13	0.735
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	MT230112	Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence	94-142	13	0.735
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	82842-82890	14	0.714
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	313592-313640	14	0.714
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	MG065691	UNVERIFIED: Campylobacter phage A11a, complete genome	63889-63937	14	0.714
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	MG065686	UNVERIFIED: Campylobacter phage A18a, complete genome	110186-110234	14	0.714
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP053721	Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence	198909-198957	14	0.714
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP019246	Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence	40305-40353	14	0.714
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP044299	Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence	91418-91466	14	0.714
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_AP023206	Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence	102544-102592	15	0.694
NZ_CP010371_3	3.1\|2426093\|49\|NZ_CP010371\|CRISPRCasFinder	2426093-2426141	49	NZ_CP044308	Escherichia coli strain C27A plasmid pC27A-3, complete sequence	56031-56079	15	0.694

1. spacer 4.7|2932039|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_021229 (Arthrobacter nicotinovorans pAO1 megaplasmid sequence, strain ATCC 49919) position: , mismatch: 5, identity: 0.844

tgggcggcttgccttgcagccagctccagcag-	CRISPR spacer
tgggcggcttgcgttgcagcctgc-cgagcgga	Protospacer
************ ******** ** * ***.*

2. spacer 4.7|2932039|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017422 (Arthrobacter sp. ZXY-2 plasmid pZXY21, complete sequence) position: , mismatch: 6, identity: 0.812

tgggcggcttgccttgcagccagctccagcag-	CRISPR spacer
ggggcggcttgcgttgcagcctgc-cgagcgga	Protospacer
 *********** ******** ** * ***.*

3. spacer 4.5|2931917|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to MF351863 (Synechococcus phage Bellamy, complete genome) position: , mismatch: 7, identity: 0.781

atcgtccatattaacaatcgtggtgagttcaa	CRISPR spacer
atcgcccatatcaacaatcgtggtgatacctt	Protospacer
****.******.**************  .*

4. spacer 4.6|2931978|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to MK416018 (Klebsiella phage ST147-VIM1phi7.1, complete genome) position: , mismatch: 7, identity: 0.781

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
tccatcacaccgccaaaaaacgcgctgatggg	Protospacer
 *.** .* *** **************.****

5. spacer 4.1|2931673|32|NZ_CP010371|CRISPRCasFinder,CRT matches to NZ_AP018516 (Acetobacter orientalis strain FAN1 plasmid pAOF1, complete sequence) position: , mismatch: 8, identity: 0.75

cagcgtcaggcgtgaaatctcaccgtcgttgc	CRISPR spacer
attctttaggcgtgacatcttaccgtcgttga	Protospacer
   * *.******** ****.**********

6. spacer 4.7|2932039|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to MK113951 (Phage 5P_3, complete genome) position: , mismatch: 8, identity: 0.75

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
ggggcagcttgccttgcagccagccgatgctc	Protospacer
 ****.******************.   **

7. spacer 4.7|2932039|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to AP017924 (Ralstonia phage RP12 DNA, complete genome) position: , mismatch: 8, identity: 0.75

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
tgggccgcttgccgtgcagccagcgcttccgc	Protospacer
***** ******* ********** *.  *.

8. spacer 5.10|2958045|33|NZ_CP010371|CRISPRCasFinder,CRT matches to NZ_CP007129 (Gemmatirosa kalamazoonesis strain KBS708 plasmid 1, complete sequence) position: , mismatch: 8, identity: 0.758

tggctctgcaacagcagcacccatgaccacgtc	CRISPR spacer
cgctccagcaacagcagcacccacgaccacgga	Protospacer
.* ..* ****************.*******

9. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

10. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

11. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

12. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

13. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

14. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

15. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

16. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

17. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

18. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

19. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacggatggcg	Protospacer
. **. **********.************************** * * .

20. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 9, identity: 0.816

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtgaacgccttatccggcctacgggtggcg	Protospacer
. **. **********.************************** * * .

21. spacer 4.6|2931978|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050104 (Rhizobium leguminosarum bv. trifolii strain 4B plasmid pRL4b2, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

22. spacer 4.6|2931978|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP025507 (Rhizobium leguminosarum bv. viciae strain UPM791 plasmid pRlvA, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

23. spacer 4.6|2931978|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050109 (Rhizobium leguminosarum bv. trifolii strain 3B plasmid pRL3b2, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

24. spacer 4.6|2931978|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP022666 (Rhizobium leguminosarum bv. viciae strain BIHB 1217 plasmid pPR1, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

25. spacer 4.6|2931978|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP050086 (Rhizobium leguminosarum bv. trifolii strain 23B plasmid pRL23b7, complete sequence) position: , mismatch: 9, identity: 0.719

actatggccccggcaaaaaacgcgctggtggg	CRISPR spacer
atatccggcccggcaaaaaaagcgcgggtggc	Protospacer
*.  . * ************ **** *****

26. spacer 1.1|476090|59|NZ_CP010371|CRISPRCasFinder matches to MT230312 (Escherichia coli strain DH5alpha plasmid pESBL31, complete sequence) position: , mismatch: 10, identity: 0.831

ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg-	CRISPR spacer
gagcacagaaccgtaggacggataaggcgttcacgccgcatccggcgat-cgtgcactga	Protospacer
*.   ************ ****************************.**  **** *.*

27. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

28. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

29. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

30. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacgactgccggatgcggcgtaaacgccttatccggcctacggatggcg	Protospacer
. **. **********.****.********************* * * .

31. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP044147 (Escherichia coli O157 strain AR-0428 plasmid pAR-0428-2) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

32. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to CP044351 (Escherichia coli strain 194195 plasmid p194195_1, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaattgccggatgcggcgtgaacgccttatccggcctacggttgagt	Protospacer
. *.. **********.**************************.* .*

33. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga--	CRISPR spacer
cacaagtgccggatgcggcgtaaacgccttatccggcctacg--ccagact	Protospacer
. *..***********.****.********************  .*.**

34. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 10, identity: 0.796

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gctggttgccggatgcggcgtgaacgccttatccggcctacattcggca	Protospacer
 *.** **********.************************. .. * *

35. spacer 4.7|2932039|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_002580 (Propionibacterium freudenreichii plasmid p545, complete sequence) position: , mismatch: 10, identity: 0.688

tgggcggcttgccttgcagccagctccagcag	CRISPR spacer
ccagcggcttgcgtggcagccagctctcaggg	Protospacer
. .********* * ***********. . .*

36. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP028970 (Aminobacter sp. MSH1 plasmid pUSP2, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
gcgtgtgctggcaatcgcttccggggtgacgt	Protospacer
. *.  ********** ***.********  .

37. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053984 (Achromobacter pestifer strain FDAARGOS_790 plasmid unnamed, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

38. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_010935 (Comamonas testosteroni CNB-1 plasmid pCNB, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

39. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to JX469826 (Uncultured bacterium plasmid pB12, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

40. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to JN106171 (Uncultured bacterium plasmid pAKD26, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

41. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_016968 (Comamonas testosteroni plasmid pTB30, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

42. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_016978 (Comamonas testosteroni plasmid pI2, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

43. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP017760 (Cupriavidus necator strain NH9 plasmid pENH91, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

44. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NZ_CP053554 (Diaphorobacter sp. JS3050 plasmid pDCNB, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

45. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_019263 (Delftia acidovorans plasmid pLME1, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

46. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_019264 (Delftia acidovorans plasmid pNB8c, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

47. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_019283 (Delftia acidovorans plasmid pC1-1, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

48. spacer 4.8|2932100|32|NZ_CP010371|CRISPRCasFinder,CRT,PILER-CR matches to NC_006830 (Achromobacter xylosoxidans A8 plasmid pA81, complete sequence) position: , mismatch: 10, identity: 0.688

aagctggctggcaatctctttcggggtgagtc	CRISPR spacer
aagctggctggcattctcattcgtcagtacct	Protospacer
************* **** ****  .  * ..

49. spacer 1.1|476090|59|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 11, identity: 0.814

-ggtgccagaaccgtaggccggataaggcgttcacgccgcatccggcaataagtgctccg	CRISPR spacer
tcgcacca-aaccgtaggccggataaggcgtttacgccgcatccggcaaaaagccgtacc	Protospacer
  *..*** ***********************.**************** ***.  * *

50. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

51. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

52. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

53. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

54. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

55. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

56. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

57. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

58. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

59. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
* .  .**********.*************************. * * .

60. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgaatggcg	Protospacer
. * . **********.*************************. * * .

61. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtgaacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*************************. * * .

62. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagc	Protospacer
. *.. .*********.************************** * .*

63. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP010208 (Escherichia coli strain M11 plasmid B, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
cacaaccgccggatgcggcgtgaacgccttatccggcctacgggtgagt	Protospacer
. *.. .*********.************************** * .*

64. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agctggtgccggatgcggcgtaaacgccttatccggcctacaaatgcgc	Protospacer
  * ************.****.*******************.. *  *

65. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023209 (Escherichia coli strain TUM18781 plasmid pMTY18781-4, complete sequence) position: , mismatch: 11, identity: 0.776

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggtgtgaacgccttatccggcctacggatggcc	Protospacer
* .  .**********.*.************************ * *

66. spacer 5.11|2958106|33|NZ_CP010371|CRISPRCasFinder,CRT matches to MF158039 (Shigella phage Sf12, complete genome) position: , mismatch: 11, identity: 0.667

gaaatactggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggggagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

67. spacer 5.11|2958106|33|NZ_CP010371|CRISPRCasFinder,CRT matches to MF158042 (Shigella phage Sd1, complete genome) position: , mismatch: 11, identity: 0.667

gaaatactggtgagcgttaatgccgcaaacaca	CRISPR spacer
cggcacttggagagcgttaatgctgcaaacaat	Protospacer
 ..   .*** ************.*******

68. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

69. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

70. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053606 (Escherichia coli strain NEB_Turbo plasmid F', complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

71. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

72. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

73. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053608 (Escherichia coli strain NEB5-alpha_F'Iq plasmid F'Iq, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

74. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

75. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

76. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014271 (Escherichia coli K-12 strain K-12 DHB4 plasmid F128-(DHB4), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

77. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

78. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtttatgccggatgcggcgtgaacgccttatccggcctacgtagagca	Protospacer
  .  .**********.*************************    * *

79. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP014273 (Escherichia coli K-12 strain K-12 C3026 plasmid F128-(C3026), complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccactgccggatgcggcgtggacgccttatccggcctacgagtggcg	Protospacer
. * . **********.*****.*******************. * * .

80. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
aatttttgccggatgcggcgtgaacgccttatccggcctacaacgggca	Protospacer
  .   **********.************************..*  * *

81. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga---	CRISPR spacer
cacaattgccggatgcggcgtaaacgccttatccggcctaca---tggataa	Protospacer
. *.. **********.****.*******************.   .***

82. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttttcttgccggatgcggcgtaaacgccttatccggcctacaggacgtg	Protospacer
*..   **********.****.*******************.*  ** .

83. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ctcaaatgccggatgcggcgtgaacgccttatccggcctacgcacacta	Protospacer
..*...**********.*************************  .   *

84. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023207 (Escherichia coli strain TUM18781 plasmid pMTY18781-2, complete sequence) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agcaaatgccggatgcggcgtaaacgccttatccggcctacatttggca	Protospacer
  *...**********.****.*******************. .* * *

85. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

86. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acactttgccggatgcggcgtgaacgcctgatccggcctacggtaagcc	Protospacer
 *    **********.************ *************.  *

87. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to MF374379 (Escherichia phage DN1, complete genome) position: , mismatch: 12, identity: 0.755

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtgaacgccttatccggcctacaaaccgcg	Protospacer
* .  .**********.************************.. .** .

88. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP048307 (Escherichia coli strain 9 plasmid p009_C, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gttgattgccggatgcggcgtaaacgccttatccggcctacattcggca	Protospacer
 ..*. **********.****.*******************. .. * *

89. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023208 (Escherichia coli strain TUM18781 plasmid pMTY18781-3, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttgttttgccggatgcggcgtgaacgccttatccggcctacaaaaccat	Protospacer
*.    **********.************************..  * .

90. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NC_049343 (Escherichia phage 500465-2, complete genome) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtgtttgccggatgcggcgtgaacgccttatccgacctacgtgtgacg	Protospacer
  .*  **********.******************.******  * . .

91. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to MT230112 (Escherichia coli strain DH5alpha plasmid pESBL112, complete sequence) position: , mismatch: 13, identity: 0.735

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
ttatgttgccggatgcggcgtaaacgccttatccggcctacaaaagcaa	Protospacer
*.  * **********.****.*******************..    .*

92. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gtaaaatgccggatgcggcgtgaacgccttatccggcctacaaaccaag	Protospacer
 . ...**********.************************.. .*...

93. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
acaaaatgccggatgcggcgtaaacgccttatccggcctacaaaatcgt	Protospacer
 * ...**********.****.*******************..  . *

94. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to MG065691 (UNVERIFIED: Campylobacter phage A11a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

95. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to MG065686 (UNVERIFIED: Campylobacter phage A18a, complete genome) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
gcttcttgccggatgcggcgtgaacgccttatccggcctacaaaatcat	Protospacer
 *.   **********.************************..  . .

96. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP053721 (Escherichia coli strain CP131_Sichuan plasmid pCP131-IncHI1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

97. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP019246 (Escherichia coli strain Combat13F7 plasmid pCombat13F7-1, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgtttatgccggatgcggcgtaaacgccttatccggcctacaaaaagcg	Protospacer
* .  .**********.****.*******************..   * .

98. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP044299 (Escherichia coli strain P59A plasmid pP59A-CTX-M-55, complete sequence) position: , mismatch: 14, identity: 0.714

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
tgttcatgccggatgcggcgtgaacgccttatccagcctacaaaattgt	Protospacer
* .  .**********.*****************.******..  . *

99. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_AP023206 (Escherichia coli strain TUM18781 plasmid pMTY18781-1_lncX3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
agtcaatgccggatgcggcgtgaacgccttatccggcctacaaaagcat	Protospacer
  . ..**********.************************..    .

100. spacer 3.1|2426093|49|NZ_CP010371|CRISPRCasFinder matches to NZ_CP044308 (Escherichia coli strain C27A plasmid pC27A-3, complete sequence) position: , mismatch: 15, identity: 0.694

tccgggtgccggatgcagcgtgaacgccttatccggcctacggctcgga	CRISPR spacer
caccattgccggatgcggcgtaaacgccttatccggcctacaaaaaacg	Protospacer
. * . **********.****.*******************..   . .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

200814 : 273656

uncultured_Caudovirales_phage(20.0%)

transposase,protease,plate,tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001295561.1\|200814_202167_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_001240896.1\|202196_204629_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_000758956.1\|204750_205236_+	molecular chaperone Skp	NA	NA	NA	NA
WP_001139279.1\|205239_206265_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_000210739.1\|206369_206825_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_000565966.1\|206828_207617_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_000139654.1\|207616_208765_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_000569432.1\|208761_209358_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	1.3e-26	40.0
WP_001294757.1\|209394_212877_+	DNA polymerase III subunit alpha	Q8W6C3	Saccharomonospora_phage	2.2e-209	36.9
WP_000055741.1\|212889_213849_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA
WP_001020973.1\|213947_216089_+	lysine decarboxylase LdcC	NA	NA	NA	NA
WP_000901099.1\|216145_216535_+	VOC family protein	NA	NA	NA	NA
WP_000176549.1\|216599_217898_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_000062312.1\|217946_218207_-	Rho-binding antiterminator	NA	NA	NA	NA
WP_000417058.1\|218193_218394_-	YaeP family protein	NA	NA	NA	NA
WP_001185290.1\|218559_219105_+	YaeQ family protein	NA	NA	NA	NA
WP_000635537.1\|219101_219524_+\|tRNA	aminoacyl-tRNA hydrolase	NA	NA	NA	NA
WP_000239163.1\|219537_220248_+	envelope stress response activation lipoprotein NlpE	NA	NA	NA	NA
WP_001336393.1\|220447_221272_-	YaeF family permuted papain-like enzyme	NA	NA	NA	NA
WP_001260712.1\|221325_223044_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA
WP_000094011.1\|223155_223863_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_001202329.1\|223859_224264_-	Rcs stress response system protein RcsF	NA	NA	NA	NA
WP_000874226.1\|224381_225197_-	methionine ABC transporter substrate-binding lipoprotein MetQ	NA	NA	NA	NA
WP_001294600.1\|225236_225890_-	methionine ABC transporter permease MetI	NA	NA	NA	NA
WP_000594006.1\|225882_226914_-	methionine ABC transporter ATP-binding protein MetN	G9BWD6	Planktothrix_phage	9.4e-36	39.7
WP_001140187.1\|227101_227677_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA
WP_000997010.1\|233436_234240_+	2,5-didehydrogluconate reductase DkgB	A0A1V0SDE7	Indivirus	2.4e-39	36.2
WP_000648572.1\|234236_235151_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_001230983.1\|235391_236192_+	endonuclease/exonuclease/phosphatase family protein	NA	NA	NA	NA
WP_000644685.1\|236866_238225_-	murein transglycosylase D	A0A2H4J9N7	uncultured_Caudovirales_phage	5.8e-09	36.0
WP_001052715.1\|238296_239052_-	hydroxyacylglutathione hydrolase	NA	NA	NA	NA
WP_001326702.1\|239085_239808_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_000917883.1\|239804_240272_-	ribonuclease HI	J9Q745	Salmonella_phage	1.0e-50	58.7
WP_001340895.1\|240336_241068_+	DNA polymerase III subunit epsilon	A0A1X9SH08	Bradyrhizobium_phage	4.5e-40	39.0
WP_001086141.1\|241604_242390_+	lipoprotein	NA	NA	NA	NA
WP_001236645.1\|242526_243006_-	hypothetical protein	NA	NA	NA	NA
WP_000908066.1\|243015_243930_-	hypothetical protein	NA	NA	NA	NA
WP_001284199.1\|243973_244456_-	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_039268232.1\|244479_245832_-	ImpA family type VI secretion system protein	NA	NA	NA	NA
WP_039268237.1\|249385_250798_-	type VI secretion system protein TssA	NA	NA	NA	NA
WP_000088852.1\|250802_251546_-	type VI secretion system-associated protein TagO	NA	NA	NA	NA
WP_000614325.1\|251542_254308_-	type VI secretion system ATPase TssH	K4FB40	Cronobacter_phage	1.8e-81	30.8
WP_000343289.1\|254316_255078_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA
WP_000246443.1\|255082_256414_-\|plate	type VI secretion system baseplate subunit TssK	NA	NA	NA	NA
WP_001080149.1\|256416_256941_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA
WP_001113713.1\|256937_258218_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA
WP_000348793.1\|258242_259325_-\|plate	type VI secretion system baseplate subunit TssG	NA	NA	NA	NA
WP_039268240.1\|259288_261139_-\|plate	type VI secretion system baseplate subunit TssF	NA	NA	NA	NA
WP_000611744.1\|261142_261556_-\|plate	type VI secretion system baseplate subunit TssE	NA	NA	NA	NA
WP_000056989.1\|261562_263038_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA
WP_000123970.1\|263088_263313_-	hypothetical protein	NA	NA	NA	NA
WP_000037397.1\|263347_263848_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA
WP_001142958.1\|264542_265061_+	Hcp family type VI secretion system effector	NA	NA	NA	NA
WP_000103354.1\|265270_267412_+	type VI secretion system tip protein VgrG	A0A077K8Q4	Ralstonia_phage	2.4e-25	25.0
WP_000508724.1\|267487_271720_+	RHS repeat protein	A0A2H4JHK7	uncultured_Caudovirales_phage	6.4e-22	43.1
WP_001101841.1\|271697_271916_+	hypothetical protein	NA	NA	NA	NA
WP_000008098.1\|271912_272089_+	hypothetical protein	NA	NA	NA	NA
WP_000420818.1\|272519_273656_+\|transposase	ISAs1 family transposase	NA	NA	NA	NA

DBSCAN-SWA_2

281914 : 356178

Enterobacteria_phage(32.14%)

transposase,protease,portal,tail,integrase,lysis,terminase

attL 304245:304260|attR 348452:348467

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000006255.1\|281914_282412_+\|transposase	REP-associated tyrosine transposase RayT	NA	NA	NA	NA
WP_001334802.1\|282635_284375_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_000207552.1\|284319_285105_+	putative lateral flagellar export/assembly protein LafU	NA	NA	NA	NA
WP_001226164.1\|285175_286231_+	DNA polymerase IV	NA	NA	NA	NA
WP_000554758.1\|286282_286576_+	type I toxin-antitoxin system antitoxin YafN	NA	NA	NA	NA
WP_001263489.1\|286578_286977_+	type II toxin-antitoxin system mRNA interferase toxin YafO	NA	NA	NA	NA
WP_001059892.1\|286986_287439_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001292994.1\|288536_289994_-	cytosol nonspecific dipeptidase	NA	NA	NA	NA
WP_001291990.1\|290254_290713_+	xanthine phosphoribosyltransferase	NA	NA	NA	NA
WP_000189532.1\|290804_292049_+	esterase FrsA	NA	NA	NA	NA
WP_000174677.1\|292106_292508_+	sigma factor-binding protein Crl	NA	NA	NA	NA
WP_000749867.1\|292546_293602_-	phosphoporin PhoE	Q1MVN1	Enterobacteria_phage	1.6e-118	61.1
WP_001285288.1\|293889_294993_+	glutamate 5-kinase	A0A1X9I5D0	Streptococcus_phage	1.1e-61	40.4
WP_000893278.1\|295004_296258_+	glutamate-5-semialdehyde dehydrogenase	A0A1X9I5D4	Streptococcus_phage	9.8e-96	47.2
WP_000051887.1\|296462_297626_-\|integrase	site-specific integrase	U5P434	Shigella_phage	2.4e-229	100.0
WP_000206732.1\|297852_298158_-	hypothetical protein	U5P0J0	Shigella_phage	6.8e-51	100.0
WP_039268244.1\|298157_298520_-	hypothetical protein	U5P092	Shigella_phage	4.0e-66	99.2
WP_000008200.1\|298510_299047_-	5'-deoxynucleotidase	U5P0T3	Shigella_phage	4.3e-101	100.0
WP_000081284.1\|299174_299999_-	DUF2303 family protein	K7PJQ6	Enterobacteria_phage	7.8e-150	99.6
WP_000135680.1\|300063_300426_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_001020632.1\|301128_301821_-	helix-turn-helix domain-containing protein	S5FUZ3	Shigella_phage	6.4e-121	96.5
WP_001191669.1\|301918_302179_+	helix-turn-helix transcriptional regulator	K7PJQ8	Enterobacteria_phage	5.4e-41	100.0
WP_000526668.1\|302171_302729_+	protein YmfL	S5FXP0	Shigella_phage	1.7e-95	94.6
WP_039268250.1\|303073_304015_+	helix-turn-helix domain-containing protein	U5P0A0	Shigella_phage	1.1e-139	93.0
WP_072097904.1\|304011_304506_+	PerC family transcriptional regulator	A0A0P0ZCF0	Stx2-converting_phage	9.6e-87	98.1
304245:304260	attL	NA	NA	NA	NA
WP_001377816.1\|304505_305159_+	phage N-6-adenine-methyltransferase	A5LH72	Enterobacteria_phage	8.1e-126	98.6
WP_000210170.1\|305155_305482_+	LexA family transcriptional regulator	A0A291AWY9	Escherichia_phage	5.4e-54	100.0
WP_024227971.1\|305886_306696_+	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	1.4e-148	98.1
WP_039268252.1\|306703_307693_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	4.3e-195	99.7
WP_039268254.1\|307710_308055_+	antitermination protein	A0A0P0ZCW0	Stx2-converting_phage	5.1e-55	89.8
WP_039268256.1\|308287_308467_+	hypothetical protein	NA	NA	NA	NA
WP_039268257.1\|308570_311723_-	metallophosphoesterase	NA	NA	NA	NA
WP_001355891.1\|312013_312208_+	hypothetical protein	Q8SBE3	Shigella_phage	1.8e-28	100.0
WP_039268279.1\|312357_313410_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	8.0e-208	99.7
WP_000839596.1\|313477_313693_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135251.1\|313692_314190_+	lysozyme RrrD	A0A291AWW2	Escherichia_phage	1.7e-91	99.4
WP_001341210.1\|314186_314654_+\|lysis	lysis protein	A0A291AWW3	Escherichia_phage	7.7e-78	100.0
WP_001139675.1\|314641_314794_+	hypothetical protein	A0A291AWZ2	Escherichia_phage	1.2e-21	100.0
WP_167405405.1\|314935_315112_-	hypothetical protein	NA	NA	NA	NA
WP_000373425.1\|315469_315964_+	DUF1441 family protein	A0A291AWV8	Escherichia_phage	9.9e-84	100.0
WP_039268283.1\|315963_318066_+\|terminase	phage terminase large subunit family protein	K7PH40	Enterobacteria_phage	0.0e+00	99.6
WP_001072975.1\|318062_318275_+	hypothetical protein	A5LH28	Enterobacteria_phage	1.1e-31	100.0
WP_000985945.1\|318274_319783_+\|portal	phage portal protein	A0A291AWU2	Escherichia_phage	7.8e-289	99.8
WP_071886860.1\|319727_321755_+\|protease	Clp protease ClpP	A0A291AWT6	Escherichia_phage	0.0e+00	99.5
WP_001097050.1\|321841_322165_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_001283144.1\|322157_322433_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	8.6e-45	98.9
WP_039268289.1\|322444_323023_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	8.0e-101	99.0
WP_001079398.1\|323019_323421_+\|tail	tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
WP_000211109.1\|323432_324176_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	7.8e-133	100.0
WP_039268599.1\|324236_324623_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	6.8e-64	98.4
WP_001161009.1\|324631_324961_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_039268292.1\|324932_327998_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	99.0
WP_000447248.1\|327997_328327_+\|tail	phage tail protein	A0A291AWW9	Escherichia_phage	1.7e-60	100.0
WP_001152385.1\|328336_329035_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	6.0e-135	100.0
WP_039268295.1\|329040_329784_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	2.9e-148	95.5
WP_044069545.1\|329720_330323_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	1.6e-88	85.6
WP_039268299.1\|330383_333881_+	host specificity protein J	A5LH43	Enterobacteria_phage	0.0e+00	98.7
WP_039268301.1\|333951_334551_+	Ail/Lom family outer membrane beta-barrel protein	A0A0P0ZCF6	Stx2-converting_phage	4.8e-109	98.0
WP_044077582.1\|334615_337894_+\|tail	phage tail protein	X2KTY7	Enterobacteria_phage	6.5e-06	58.8
WP_039268303.1\|337893_338478_+\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	1.5e-102	94.3
WP_039268304.1\|339110_342362_+	hypothetical protein	NA	NA	NA	NA
WP_000772642.1\|342996_344211_+\|integrase	tyrosine-type recombinase/integrase	Q7M297	Enterobacteria_phage	7.5e-133	56.5
WP_000251023.1\|344353_345235_+	hypothetical protein	NA	NA	NA	NA
WP_000083330.1\|345432_345630_+	AlpA family transcriptional regulator	A0A1V0E8E5	Vibrio_phage	1.7e-07	48.1
WP_001035842.1\|345629_346061_+	hypothetical protein	A0A1W6JPH9	Morganella_phage	5.1e-28	49.0
WP_001019376.1\|346073_346907_+	antA/AntB antirepressor family protein	G9L6G1	Escherichia_phage	5.3e-21	47.5
WP_000476150.1\|346899_347082_+	DUF4222 domain-containing protein	NA	NA	NA	NA
WP_000958750.1\|347075_348143_+	ash family protein	NA	NA	NA	NA
WP_001065741.1\|348135_348330_+	hypothetical protein	NA	NA	NA	NA
WP_001024675.1\|348326_348590_+	hypothetical protein	NA	NA	NA	NA
348452:348467	attR	NA	NA	NA	NA
WP_000181940.1\|348586_348808_+	hypothetical protein	NA	NA	NA	NA
WP_001058748.1\|348800_349403_+	hypothetical protein	A0A286S1S7	Klebsiella_phage	2.6e-25	36.3
WP_000628967.1\|349413_349755_+	hypothetical protein	A0A1B5FPL8	Escherichia_phage	2.5e-33	61.5
WP_001580247.1\|349747_350119_+	hypothetical protein	NA	NA	NA	NA
WP_001585368.1\|350105_352862_+	TOPRIM and DUF927 domain-containing protein	A0A1W6JPG0	Morganella_phage	1.8e-299	57.3
WP_001018524.1\|353446_353608_+	hypothetical protein	NA	NA	NA	NA
WP_000420674.1\|353624_354086_+	DUF2824 family protein	Q2A0B3	Sodalis_phage	2.9e-61	72.2
WP_000909175.1\|354079_354757_+	hypothetical protein	Q2A0B2	Sodalis_phage	9.2e-56	71.6
WP_001585369.1\|354756_356178_+	phage DNA ejection protein	B6SCW4	Bacteriophage	2.2e-123	53.0

DBSCAN-SWA_3

1652426 : 1705731

Enterobacteria_phage(47.06%)

transposase,terminase,tail,portal,integrase,lysis,capsid,head

attL 1664265:1664279|attR 1712420:1712434

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000527809.1\|1652426_1653887_-	mannitol dehydrogenase family protein	H8ZJP8	Ostreococcus_tauri_virus	1.5e-42	29.6
WP_120795384.1\|1655863_1655977_+	hypothetical protein	A0A1C9IHU6	Salmonella_phage	8.4e-07	80.6
WP_000836768.1\|1656045_1656279_+	cold shock protein YdfK	A0A192Y6D5	Salmonella_phage	1.1e-32	88.3
WP_000078177.1\|1656595_1657186_+	recombinase family protein	A0A0A7NPV4	Enterobacteria_phage	1.6e-24	38.8
WP_000885611.1\|1657283_1657859_-\|tail	tail fiber assembly protein	K7PMH7	Enterobacteria_phage	6.5e-103	95.3
WP_044721746.1\|1657858_1658761_-\|tail	tail fiber protein	K7PHC9	Enterobacteria_phage	4.2e-40	72.7
WP_085947771.1\|1658826_1659988_+\|transposase	IS3-like element IS3 family transposase	A0A0P0I4A4	Acinetobacter_phage	3.1e-51	40.6
WP_001230375.1\|1662258_1662858_-	Ail/Lom family protein	A0A291AWV3	Escherichia_phage	5.7e-110	98.5
WP_000515714.1\|1662927_1666425_-	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	97.3
1664265:1664279	attL	NA	NA	NA	NA
WP_000090895.1\|1666485_1667118_-\|tail	tail assembly protein	A0A2R9YJH6	Escherichia_phage	5.5e-95	89.5
WP_000194783.1\|1667054_1667798_-\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	1.2e-146	96.4
WP_001152640.1\|1667803_1668502_-\|tail	phage minor tail protein L	A0A0K2FJ01	Enterobacteria_phage	1.5e-133	99.6
WP_000847379.1\|1668501_1668831_-\|tail	phage tail protein	A0A0K2FIE9	Enterobacteria_phage	9.6e-59	100.0
WP_000840342.1\|1668827_1671389_-\|tail	phage tail tape measure protein	A0A0K2FI43	Enterobacteria_phage	0.0e+00	91.7
WP_000459465.1\|1671381_1671816_-\|tail	phage tail assembly protein T	A0A0K2FJB3	Enterobacteria_phage	2.0e-64	99.2
WP_000479142.1\|1671797_1672220_-\|tail	phage minor tail protein G	A0A0K2FIQ8	Enterobacteria_phage	1.1e-70	96.4
WP_001349920.1\|1672235_1672976_-\|tail	phage tail protein	A0A0K2FJ05	Enterobacteria_phage	7.8e-133	100.0
WP_000683105.1\|1672983_1673379_-\|tail	tail protein	A0A0K2FIF4	Enterobacteria_phage	1.0e-70	100.0
WP_000975070.1\|1673375_1673954_-\|tail	phage tail protein	A0A2R9YJK4	Escherichia_phage	2.7e-80	100.0
WP_000753007.1\|1673965_1674319_-\|head,tail	head-tail joining protein	A0A0K2FJB7	Enterobacteria_phage	4.4e-62	99.1
WP_000158905.1\|1674330_1674729_-	DNA-packaging protein FI	A0A0K2FIR1	Enterobacteria_phage	1.2e-63	99.2
WP_000063277.1\|1674770_1675796_-\|capsid	major capsid protein	C6ZCY2	Enterobacteria_phage	2.7e-192	99.7
WP_001295978.1\|1675852_1676185_-\|head	head decoration protein	A0A2R9YJN3	Escherichia_phage	3.8e-55	99.1
WP_000123218.1\|1676194_1677514_-	S49 family peptidase	A0A0K2FI53	Enterobacteria_phage	9.6e-235	99.1
WP_001349919.1\|1677494_1679096_-\|portal	phage portal protein	A0A0K2FJC0	Enterobacteria_phage	5.9e-311	99.6
WP_000198149.1\|1679092_1679299_-	gpW family protein	A0A2R9YJL2	Escherichia_phage	5.8e-30	100.0
WP_001027259.1\|1679295_1681221_-\|terminase	phage terminase large subunit family protein	A0A0K2FJ14	Enterobacteria_phage	0.0e+00	99.4
WP_000453611.1\|1681195_1681741_-	DNA-packaging protein	A0A0K2FIG2	Enterobacteria_phage	2.3e-94	98.3
WP_001368374.1\|1682129_1682363_+	YlcI/YnfO family protein	A0A0K2FIR8	Escherichia_phage	2.5e-21	84.1
WP_000373090.1\|1682420_1682831_+	DUF1398 domain-containing protein	C6ZCX4	Enterobacteria_phage	2.5e-56	79.4
WP_001019606.1\|1682982_1683156_-	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA
WP_001309517.1\|1683327_1683483_-	hypothetical protein	NA	NA	NA	NA
WP_120795388.1\|1683562_1683628_-	hypothetical protein	NA	NA	NA	NA
WP_071524604.1\|1683630_1683819_-	cold-shock protein	NA	NA	NA	NA
WP_000066495.1\|1683829_1684042_-	cold shock protein CspI	A0A1W6JNX5	Morganella_phage	1.2e-22	74.3
WP_001071769.1\|1684404_1684902_-	DUF2514 domain-containing protein	A0A291LBG9	Klebsiella_phage	2.9e-06	29.5
WP_001092971.1\|1684898_1685432_-	lysozyme	K7PLY1	Enterobacteria_phage	6.4e-97	93.2
WP_000189916.1\|1685428_1685740_-	YdfR family protein	K7PGU6	Enterobacteria_phage	2.0e-26	64.6
WP_000839590.1\|1685744_1685960_-\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	1.1e-31	94.4
WP_106423973.1\|1686297_1686995_-\|transposase	IS1 family transposase	A0A077SLN4	Escherichia_phage	5.1e-126	93.1
WP_052424683.1\|1687028_1687520_-	antitermination protein	Q8SBE4	Shigella_phage	2.5e-79	94.2
WP_001265199.1\|1687533_1688583_-	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	2.8e-112	57.0
WP_012304870.1\|1688584_1688863_-	hypothetical protein	NA	NA	NA	NA
WP_000980994.1\|1688929_1689181_-	hypothetical protein	NA	NA	NA	NA
WP_000813254.1\|1689397_1689553_-	type I toxin-antitoxin system toxin HokD	A0A0U2QV81	Escherichia_phage	1.5e-17	96.1
WP_000323025.1\|1689624_1689912_-	type II toxin-antitoxin system mRNA interferase RelE	A0A2H4JBF4	uncultured_Caudovirales_phage	1.4e-29	66.0
WP_000534858.1\|1689911_1690151_-	type II toxin-antitoxin system antitoxin RelB	A0A2H4JBG1	uncultured_Caudovirales_phage	1.6e-18	54.4
WP_001326990.1\|1690175_1690481_+	hypothetical protein	NA	NA	NA	NA
WP_001301033.1\|1690683_1691016_+	protein FlxA	NA	NA	NA	NA
WP_000589005.1\|1691452_1692766_-\|transposase	ISNCY family transposase	NA	NA	NA	NA
WP_000839179.1\|1694043_1694448_+	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0
WP_000612626.1\|1694444_1694792_+	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_001333339.1\|1694840_1696376_+\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.5e-289	99.4
WP_001310834.1\|1696895_1697252_-	class I SAM-dependent methyltransferase	H9C170	Pectobacterium_phage	1.6e-38	69.6
WP_001151262.1\|1697248_1697671_-	DUF977 family protein	A0A0U2QQN3	Escherichia_phage	4.4e-64	92.0
WP_000054512.1\|1697711_1698677_-	hypothetical protein	U5P0A0	Shigella_phage	2.2e-55	60.2
WP_000705358.1\|1698657_1699179_-	hypothetical protein	NA	NA	NA	NA
WP_000920568.1\|1699162_1699393_-	dicB transcriptional regulator DicC	NA	NA	NA	NA
WP_000448564.1\|1699476_1699884_+	DNA-binding transcriptional dual regulator DicA	K7PM82	Enterobacteria_phage	4.4e-13	54.7
WP_000379575.1\|1700050_1700206_+	DUF1391 family protein	M4QQ57	Salicola_phage	3.0e-07	53.2
WP_001171942.1\|1700365_1700584_+	hypothetical protein	NA	NA	NA	NA
WP_000854559.1\|1701151_1701340_+	cell division inhibition protein DicB	NA	NA	NA	NA
WP_001083297.1\|1701336_1701528_+\|lysis	lysis protein YdfD	NA	NA	NA	NA
WP_000005552.1\|1704164_1704416_+	excisionase family protein	S4TND0	Salmonella_phage	2.2e-15	50.0
WP_000876958.1\|1704450_1705731_+\|integrase	site-specific integrase	B6DZ48	Enterobacteria_phage	3.3e-155	62.1
1712420:1712434	attR	NA	NA	NA	NA

DBSCAN-SWA_4

2001822 : 2078525

Enterobacteria_phage(29.73%)

plate,tail,portal,integrase,tRNA,capsid,head

attL 2058737:2058752|attR 2081696:2081711

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001258678.1\|2001822_2003595_-\|tRNA	aspartate--tRNA ligase	NA	NA	NA	NA
WP_000891621.1\|2003904_2004471_+	hydrolase	NA	NA	NA	NA
WP_000639274.1\|2004467_2005286_+	DUF72 domain-containing protein	Q859D1	Escherichia_coli_phage	6.5e-72	99.2
WP_000252980.1\|2005338_2005734_+	MAPEG family protein	NA	NA	NA	NA
WP_000019590.1\|2005774_2006518_+	carboxy-S-adenosyl-L-methionine synthase CmoA	F5B419	Synechococcus_phage	3.5e-24	30.0
WP_000564725.1\|2006514_2007486_+\|tRNA	tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB	NA	NA	NA	NA
WP_000176782.1\|2007650_2010080_-	trimethylamine N-oxide reductase TorZ	NA	NA	NA	NA
WP_001214290.1\|2010104_2011205_-	NapC/NirT family cytochrome c	NA	NA	NA	NA
WP_001185741.1\|2011592_2012339_-	copper homeostasis protein CutC	NA	NA	NA	NA
WP_001326725.1\|2012352_2012919_-	VOC family protein	NA	NA	NA	NA
WP_001025322.1\|2013134_2014868_+\|tRNA	arginine--tRNA ligase	A0A2K9L6Z2	Tupanvirus	3.4e-86	33.5
WP_001299676.1\|2015044_2015533_+	lysozyme inhibitor LprI family protein	NA	NA	NA	NA
WP_001259583.1\|2015652_2016045_-	flagellar protein FlhE	NA	NA	NA	NA
WP_000066951.1\|2016044_2018123_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA
WP_001278954.1\|2018115_2019264_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA
WP_000983609.1\|2019465_2020110_-	protein phosphatase CheZ	NA	NA	NA	NA
WP_000763867.1\|2020120_2020510_-	chemotaxis response regulator CheY	A0A2K9L4R0	Tupanvirus	1.3e-06	32.0
WP_000036361.1\|2020524_2021574_-	protein-glutamate methylesterase/protein glutamine deamidase	Q56AR1	Bacillus_thuringiensis_phage	7.9e-06	32.8
WP_000204337.1\|2021576_2022437_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA
WP_000483239.1\|2022455_2024057_-	methyl-accepting chemotaxis protein IV	A0A2H4J162	uncultured_Caudovirales_phage	6.4e-15	29.7
WP_001297437.1\|2024102_2025764_-	methyl-accepting chemotaxis protein II	A0A2H4J162	uncultured_Caudovirales_phage	1.7e-10	40.3
WP_000147302.1\|2025908_2026412_-	chemotaxis protein CheW	NA	NA	NA	NA
WP_072279672.1\|2026432_2028397_-	chemotaxis protein CheA	NA	NA	NA	NA
WP_000795630.1\|2028401_2029328_-	flagellar motor protein MotB	NA	NA	NA	NA
WP_000906340.1\|2029324_2030212_-	flagellar motor stator protein MotA	NA	NA	NA	NA
WP_001291603.1\|2030338_2030917_-	flagellar transcriptional regulator FlhC	NA	NA	NA	NA
WP_001295647.1\|2030919_2031270_-	flagellar transcriptional regulator FlhD	NA	NA	NA	NA
WP_000122426.1\|2032048_2032477_+	universal stress protein UspC	NA	NA	NA	NA
WP_001295646.1\|2032483_2033908_-	alpha,alpha-trehalose-phosphate synthase	NA	NA	NA	NA
WP_001295645.1\|2033882_2034683_-	trehalose-phosphatase	NA	NA	NA	NA
WP_000100205.1\|2034849_2035836_-	arabinose ABC transporter permease AraH	NA	NA	NA	NA
WP_001187819.1\|2035850_2037365_-	arabinose ABC transporter ATP binding protein AraG	A0A285PWH2	Cedratvirus	1.3e-12	29.7
WP_000548675.1\|2037434_2038424_-	arabinose ABC transporter substrate-binding protein AraF	NA	NA	NA	NA
WP_000179469.1\|2039220_2039724_+	non-heme ferritin-like protein	NA	NA	NA	NA
WP_000082127.1\|2039802_2040054_-	DUF2766 domain-containing protein	NA	NA	NA	NA
WP_010723106.1\|2040168_2040255_-	stress response protein AzuC	NA	NA	NA	NA
WP_001237869.1\|2040517_2040841_+	YecR-like lipofamily protein	NA	NA	NA	NA
WP_000917208.1\|2041011_2041509_+	non-heme ferritin	NA	NA	NA	NA
WP_000377225.1\|2041546_2041786_-	YecH family protein	NA	NA	NA	NA
WP_000797560.1\|2041976_2043188_+	tyrosine transporter TyrP	NA	NA	NA	NA
WP_000847902.1\|2043249_2043915_-	UPF0149 family protein YecA	NA	NA	NA	NA
WP_039268386.1\|2044270_2044519_-	ogr/Delta-like zinc finger family protein	NA	NA	NA	NA
WP_039268387.1\|2044564_2045719_-	phage late control D family protein	B9A7A9	Serratia_phage	2.8e-169	76.8
WP_038253286.1\|2045870_2047052_+\|tail	phage tail sheath subtilisin-like domain-containing protein	A0A0A7NV69	Enterobacteria_phage	5.5e-157	69.9
WP_010835090.1\|2047052_2047568_+\|tail	phage major tail tube protein	A0A0A7NPV8	Enterobacteria_phage	1.5e-63	67.6
WP_039268388.1\|2047622_2047922_+\|tail	phage tail assembly protein	B9A7B2	Serratia_phage	1.2e-31	74.7
WP_044069246.1\|2047969_2048095_+\|tail	GpE family phage tail protein	O80316	Escherichia_phage	3.5e-06	61.8
WP_052424680.1\|2048084_2050808_+\|tail	phage tail tape measure protein	B9A7B3	Serratia_phage	2.2e-241	81.1
WP_039268623.1\|2050817_2051306_+\|tail	phage tail protein	A0A0A7NV65	Enterobacteria_phage	3.0e-56	65.4
WP_039268389.1\|2051313_2051883_-	recombinase family protein	A0A0F7LA37	Escherichia_phage	1.2e-85	84.0
WP_130714801.1\|2052413_2052695_+	hypothetical protein	NA	NA	NA	NA
WP_039268627.1\|2052910_2053327_-\|tail	tail fiber assembly protein	B6SCW7	Bacteriophage	3.8e-20	44.8
WP_039268391.1\|2053329_2054520_-\|tail	phage tail protein	A0A0M3ULH6	Salmonella_phage	7.9e-111	80.5
WP_008500379.1\|2054509_2055124_-\|tail	phage tail protein I	A0A1S6L000	Salmonella_phage	5.9e-70	59.1
WP_039268393.1\|2055116_2056013_-\|plate	baseplate J/gp47 family protein	A0A0A7NPY5	Enterobacteria_phage	2.0e-103	67.8
WP_010835080.1\|2055999_2056368_-	GPW/gp25 family protein	A0A0A7NQ90	Enterobacteria_phage	3.2e-31	58.6
WP_010835079.1\|2056364_2056949_-\|plate	phage baseplate assembly protein V	A0A0A7NRZ3	Enterobacteria_phage	3.7e-61	59.8
WP_039268394.1\|2056948_2057590_-	phage virion morphogenesis protein	A0A0M4RCU1	Salmonella_phage	5.8e-44	47.8
WP_039268395.1\|2057586_2058036_-\|tail	phage tail protein	A0A0A7NPU6	Enterobacteria_phage	2.6e-30	46.3
WP_039268396.1\|2058177_2058573_-	hypothetical protein	NA	NA	NA	NA
WP_039268397.1\|2058569_2059121_-	lysozyme	Q1I0Z1	Pasteurella_virus	1.6e-29	40.2
2058737:2058752	attL	NA	NA	NA	NA
WP_000420349.1\|2059117_2059399_-	hypothetical protein	B9A7B8	Serratia_phage	1.0e-16	50.6
WP_000864915.1\|2059389_2059590_-\|tail	tail protein X	A0A0A7NV57	Enterobacteria_phage	2.3e-15	64.6
WP_023305074.1\|2059589_2060087_-\|head	head completion/stabilization protein	B9A7B7	Serratia_phage	4.2e-58	70.3
WP_000430111.1\|2061101_2062151_-\|capsid	phage major capsid protein, P2 family	A0A0M3ULA3	Salmonella_phage	3.6e-107	54.2
WP_008500366.1\|2062174_2063008_-\|capsid	GPO family capsid scaffolding protein	A0A0A7NRY7	Enterobacteria_phage	1.8e-93	64.4
WP_008500365.1\|2063168_2064890_+	helix-turn-helix domain-containing protein	A0A0A7NV54	Enterobacteria_phage	1.1e-225	65.5
WP_039268400.1\|2064892_2065945_+\|portal	phage portal protein	A0A0A7NPT9	Enterobacteria_phage	1.6e-139	68.5
WP_139246995.1\|2066453_2069252_-	hypothetical protein	NA	NA	NA	NA
WP_139246993.1\|2069308_2069695_-	hypothetical protein	A0A0M4RTM8	Salmonella_phage	8.4e-22	50.0
WP_039268402.1\|2069828_2070095_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	2.5e-09	42.4
WP_039268404.1\|2070281_2070656_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_044069413.1\|2070771_2073186_-	replication endonuclease	F1BUS0	Erwinia_phage	6.4e-136	41.0
WP_171860840.1\|2073222_2073396_-	hypothetical protein	NA	NA	NA	NA
WP_039268405.1\|2073395_2074358_-	Dam family site-specific DNA-(adenine-N6)-methyltransferase	A0A0M4QWR0	Salmonella_phage	3.9e-60	45.0
WP_157838309.1\|2074350_2074518_-	hypothetical protein	NA	NA	NA	NA
WP_139246991.1\|2074598_2074880_-	hypothetical protein	NA	NA	NA	NA
WP_039268409.1\|2074879_2075062_-	hypothetical protein	NA	NA	NA	NA
WP_109543479.1\|2075569_2075995_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_039268412.1\|2076008_2076638_+	membrane protein	NA	NA	NA	NA
WP_052424691.1\|2076654_2077521_+	BRCT domain-containing protein	NA	NA	NA	NA
WP_039268413.1\|2077517_2078525_+\|integrase	tyrosine-type recombinase/integrase	Q94N03	Haemophilus_virus	1.2e-104	58.4
2081696:2081711	attR	NA	NA	NA	NA

DBSCAN-SWA_5

2183624 : 2195087

Escherichia_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000025034.1\|2183624_2184920_-	O9 family O-antigen ABC transporter ATP-binding protein Wzt	A0A2H4PQG7	Staphylococcus_phage	1.5e-14	27.0
WP_001310941.1\|2184922_2185708_-	O9 family O-antigen ABC transporter permease subunit Wzm	NA	NA	NA	NA
WP_039268424.1\|2187901_2189068_-	nucleotide sugar dehydrogenase	O41091	Paramecium_bursaria_Chlorella_virus	2.1e-108	53.2
WP_039268425.1\|2189246_2189801_-	dTDP-4-dehydrorhamnose 3,5-epimerase	A0A291LA62	Escherichia_phage	5.0e-52	57.5
WP_039268426.1\|2189815_2190706_-	dTDP-4-dehydrorhamnose reductase	A0A291LA50	Escherichia_phage	1.3e-28	34.2
WP_039268427.1\|2190737_2191607_-	glucose-1-phosphate thymidylyltransferase RfbA	I7I009	Enterobacteria_phage	5.7e-111	67.0
WP_039268428.1\|2191620_2192685_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.3e-104	55.0
WP_039268429.1\|2193680_2195087_-	NADP-dependent phosphogluconate dehydrogenase	M4QQM4	Ostreococcus_lucimarinus_virus	7.3e-39	28.9

DBSCAN-SWA_6

2288017 : 2297458

Enterobacteria_phage(85.71%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001333512.1\|2288017_2289154_+	VWA domain-containing protein	Q9EYF7	Enterobacteria_phage	1.9e-162	97.7
WP_001375261.1\|2289150_2291151_+	SWIM zinc finger family protein	Q9EYF6	Enterobacteria_phage	0.0e+00	96.1
WP_001295429.1\|2291275_2291737_+	YehR family lipoprotein	Q9EYF5	Enterobacteria_phage	1.9e-76	100.0
WP_000950409.1\|2291776_2292247_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	5.2e-82	100.0
WP_000598641.1\|2292293_2293013_-	two-component system response regulator BtsR	NA	NA	NA	NA
WP_001295431.1\|2293009_2294695_-	two-component regulatory system sensor histidine kinase BtsS	Q9EYF3	Enterobacteria_phage	2.5e-304	99.6
WP_001240401.1\|2294916_2295648_+	HTH-type transcriptional regulator MlrA	Q9EYF2	Enterobacteria_phage	9.7e-112	99.5
WP_001216963.1\|2295707_2295815_+	protein YohO	NA	NA	NA	NA
WP_000783120.1\|2295795_2296527_-	glycine betaine ABC transporter permease YehW	NA	NA	NA	NA
WP_000569315.1\|2296531_2297458_-	glycine betaine ABC transporter ATP binding protein YehX	G3M9Y6	Bacillus_virus	2.8e-23	30.8

DBSCAN-SWA_7

2911034 : 2924217

Escherichia_phage(50.0%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001272928.1\|2911034_2913596_+	DNA mismatch repair protein MutS	E3T5Q7	Cafeteria_roenbergensis_virus	3.0e-30	20.6
WP_001141322.1\|2913701_2914358_+	protein-serine/threonine phosphatase	A0A222YWF0	Escherichia_phage	6.2e-49	46.3
WP_001300386.1\|2914408_2915176_-	DeoR/GlpR transcriptional regulator	A0A077SK06	Escherichia_phage	7.4e-70	56.3
WP_000847985.1\|2915371_2916280_+	NAD(P)-dependent oxidoreductase	A0A077SLF7	Escherichia_phage	3.0e-118	76.9
WP_000590403.1\|2916276_2917539_+	four-carbon acid sugar kinase family protein	A0A077SLJ7	Escherichia_phage	1.7e-135	61.4
WP_001278994.1\|2917535_2918174_+	aldolase	A0A077SK32	Escherichia_phage	1.4e-82	75.0
WP_001136934.1\|2918178_2918955_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_000104441.1\|2919043_2920408_+	GntP family transporter	NA	NA	NA	NA
WP_000081550.1\|2920501_2921494_-	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.1e-32	37.6
WP_039268456.1\|2921556_2922696_-	murein hydrolase activator NlpD	D7RWE0	Brochothrix_phage	1.7e-06	35.6
WP_000254708.1\|2922835_2923462_-	protein-L-isoaspartate O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	5.7e-36	49.7
WP_001295182.1\|2923455_2924217_-	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	3.4e-59	48.0

DBSCAN-SWA_8

4309823 : 4353231

Escherichia_phage(44.44%)

protease,portal,tail,integrase,lysis,tRNA,terminase

attL 4322057:4322070|attR 4355638:4355651

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_000390072.1\|4309823_4309997_+	hypothetical protein	K7PJQ2	Enterobacteria_phage	9.8e-23	98.2
WP_001093916.1\|4310044_4310326_-	pyocin activator PrtN family protein	K7PGU0	Enterobacteria_phage	2.8e-43	96.8
WP_187440354.1\|4310362_4311115_-	hypothetical protein	NA	NA	NA	NA
WP_000081311.1\|4311333_4312158_-	DUF2303 family protein	U5P439	Shigella_phage	3.0e-149	99.3
WP_000135680.1\|4312223_4312586_-	hypothetical protein	Q8SBF8	Shigella_phage	8.6e-61	100.0
WP_039268519.1\|4313272_4313947_-	LexA family transcriptional regulator	Q8SBF6	Shigella_phage	1.5e-130	99.1
WP_000649477.1\|4314037_4314238_+	helix-turn-helix domain-containing protein	U5P445	Shigella_phage	7.9e-32	100.0
WP_039268521.1\|4314281_4314833_+	hypothetical protein	Q8SBF4	Shigella_phage	9.9e-101	99.5
WP_039268523.1\|4314829_4315666_+	ash family protein	Q8SBF3	Shigella_phage	6.9e-138	92.1
WP_039268524.1\|4315658_4315895_+	hypothetical protein	A0A291AX25	Escherichia_phage	3.9e-38	97.4
WP_039268525.1\|4315891_4316710_+	helix-turn-helix domain-containing protein	Q8SBF1	Shigella_phage	4.0e-122	99.6
WP_001373594.1\|4316706_4317201_+	PerC family transcriptional regulator	A0A291AWV6	Escherichia_phage	3.9e-88	100.0
WP_021518589.1\|4317200_4317527_+	LexA repressor	A0A291AWY9	Escherichia_phage	4.5e-53	99.1
WP_000767113.1\|4317523_4317913_+	RusA family crossover junction endodeoxyribonuclease	A0A0P0ZD39	Stx2-converting_phage	7.1e-69	100.0
WP_001061444.1\|4317932_4318742_+	KilA-N domain-containing protein	A0A291AWU7	Escherichia_phage	1.8e-151	100.0
WP_001360050.1\|4318749_4319739_+	DUF968 domain-containing protein	A0A291AWV9	Escherichia_phage	1.5e-195	100.0
WP_039268527.1\|4319752_4320505_+	antitermination protein	A0A291AWZ5	Escherichia_phage	8.1e-138	99.2
WP_000217632.1\|4320785_4321211_+	hypothetical protein	A0A291AWZ9	Escherichia_phage	3.6e-74	100.0
WP_000917724.1\|4321434_4321638_+	hypothetical protein	A0A291AWX6	Escherichia_phage	6.1e-32	100.0
WP_000799656.1\|4321788_4322841_+	site-specific DNA-methyltransferase	A5LH81	Enterobacteria_phage	2.7e-208	100.0
4322057:4322070	attL	NA	NA	NA	NA
WP_000839596.1\|4322908_4323124_+\|lysis	phage lysis protein EssD	A5LH82	Enterobacteria_phage	9.0e-34	100.0
WP_001135250.1\|4323123_4323621_+	lysozyme RrrD	A0A291AWW2	Escherichia_phage	4.5e-92	100.0
WP_001341210.1\|4323617_4324085_+\|lysis	lysis protein	A0A291AWW3	Escherichia_phage	7.7e-78	100.0
WP_001139675.1\|4324072_4324225_+	hypothetical protein	A0A291AWZ2	Escherichia_phage	1.2e-21	100.0
WP_001205130.1\|4324366_4324543_-	hypothetical protein	NA	NA	NA	NA
WP_077784971.1\|4324898_4325438_+	DUF1441 family protein	A5LH26	Enterobacteria_phage	4.0e-94	99.4
WP_044721808.1\|4325446_4327546_+\|terminase	phage terminase large subunit family protein	A5LH27	Enterobacteria_phage	0.0e+00	98.6
WP_039268529.1\|4327542_4327755_+	hypothetical protein	A5LH28	Enterobacteria_phage	3.2e-31	98.6
WP_001459763.1\|4327754_4329230_+\|portal	phage portal protein	A5LH29	Enterobacteria_phage	2.0e-281	99.2
WP_086714422.1\|4329207_4331235_+\|protease	Clp protease ClpP	A5LH30	Enterobacteria_phage	0.0e+00	99.4
WP_001097050.1\|4331321_4331645_+	DUF2190 family protein	A0A291AWX2	Escherichia_phage	8.5e-52	100.0
WP_001283153.1\|4331637_4331913_+	DNA breaking-rejoining protein	K7PH43	Enterobacteria_phage	2.3e-45	100.0
WP_000677108.1\|4331924_4332503_+\|tail	phage tail protein	A5LH33	Enterobacteria_phage	7.2e-102	99.5
WP_001079398.1\|4332499_4332901_+\|tail	tail protein	A0A291AWY2	Escherichia_phage	8.3e-73	100.0
WP_000211109.1\|4332912_4333656_+\|tail	phage tail protein	A0A291AWU6	Escherichia_phage	7.8e-133	100.0
WP_001297778.1\|4333716_4334103_+\|tail	phage minor tail protein G	A0A291AWW5	Escherichia_phage	3.6e-65	99.2
WP_001161009.1\|4334111_4334441_+\|tail	phage tail assembly protein T	A5LH37	Enterobacteria_phage	7.6e-56	100.0
WP_039268531.1\|4334412_4337487_+\|tail	phage tail tape measure protein	A0A291AWX1	Escherichia_phage	0.0e+00	95.3
WP_000447253.1\|4337486_4337816_+\|tail	phage tail protein	A5LH39	Enterobacteria_phage	1.7e-60	100.0
WP_039268532.1\|4337825_4338524_+\|tail	phage minor tail protein L	A5LH40	Enterobacteria_phage	1.0e-134	99.6
WP_025670561.1\|4338528_4339272_+\|tail	phage tail protein	K7PLW1	Enterobacteria_phage	5.0e-148	97.2
WP_028127181.1\|4339169_4339811_+\|tail	tail assembly protein	A5LH42	Enterobacteria_phage	3.8e-96	85.6
WP_153274582.1\|4339883_4340222_+	hypothetical protein	NA	NA	NA	NA
WP_039268533.1\|4340288_4343786_+	host specificity protein J	A0A291AWT4	Escherichia_phage	0.0e+00	99.3
WP_039268534.1\|4343855_4344455_+	Ail/Lom family outer membrane beta-barrel protein	A0A291AWV3	Escherichia_phage	4.4e-110	97.5
WP_077784975.1\|4344519_4348281_+\|tail	prophage tail fiber N-terminal domain-containing protein	A0A2D1UII2	Escherichia_phage	0.0e+00	97.8
WP_039268535.1\|4348576_4349947_-	reverse transcriptase	NA	NA	NA	NA
WP_000543834.1\|4349924_4350476_-	SLATT domain-containing protein	NA	NA	NA	NA
WP_001217553.1\|4350698_4350947_-	DinI-like family protein	K7PLW4	Enterobacteria_phage	1.8e-38	100.0
WP_000332259.1\|4351007_4352105_-\|integrase	site-specific integrase	S5MDN5	Escherichia_phage	1.8e-210	99.2
WP_000543841.1\|4352193_4353231_+\|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	NA	NA	NA	NA
4355638:4355651	attR	NA	NA	NA	NA

DBSCAN-SWA_9

4554530 : 4624048

Vibrio_phage(17.65%)

transposase,protease,holin,integrase,tRNA

attL 4579424:4579440|attR 4599523:4599539

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001162171.1\|4554530_4555883_+\|protease	metalloprotease PmbA	NA	NA	NA	NA
WP_001232255.1\|4556065_4556452_+	cytochrome b562	NA	NA	NA	NA
WP_001106226.1\|4556496_4556961_-	anaerobic ribonucleoside-triphosphate reductase-activating protein	H6WXC9	Vibrio_phage	2.5e-52	59.7
WP_039268544.1\|4557118_4559257_-	anaerobic ribonucleoside-triphosphate reductase	A0A2I7QNQ7	Vibrio_phage	3.4e-266	64.5
WP_001301172.1\|4559650_4561306_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA
WP_001299664.1\|4561355_4562777_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA
WP_001181312.1\|4562895_4563843_-	HTH-type transcriptional regulator TreR	C6ZCU4	Enterobacteria_phage	7.9e-13	21.8
WP_001387276.1\|4564027_4564081_+	mgtA regulatory leader peptide MgtL	NA	NA	NA	NA
WP_000471885.1\|4564221_4566918_+	magnesium-translocating P-type ATPase	M1HLC0	Paramecium_bursaria_Chlorella_virus	8.2e-47	27.6
WP_000047539.1\|4567123_4567510_-	2-iminobutanoate/2-iminopropanoate deaminase	NA	NA	NA	NA
WP_000148581.1\|4567582_4568044_-	aspartate carbamoyltransferase regulatory subunit	NA	NA	NA	NA
WP_000013046.1\|4568056_4568992_-	aspartate carbamoyltransferase	M1HWF9	Paramecium_bursaria_Chlorella_virus	2.9e-52	40.2
WP_001296693.1\|4568995_4569130_-	pyr operon leader peptide	NA	NA	NA	NA
WP_000230281.1\|4569410_4569806_-	RidA family protein	NA	NA	NA	NA
WP_000500689.1\|4569936_4570650_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_000256681.1\|4570720_4571314_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001326836.1\|4571458_4571911_+	toxin-antitoxin biofilm protein TabA	NA	NA	NA	NA
WP_000036448.1\|4572033_4573629_+	hypothetical protein	NA	NA	NA	NA
WP_000012907.1\|4573684_4574689_-	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000002953.1\|4574850_4575267_+	ribonuclease E inhibitor RraB	NA	NA	NA	NA
WP_001059412.1\|4575312_4575816_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_000079655.1\|4576000_4577197_+	DUF898 domain-containing protein	NA	NA	NA	NA
WP_000416382.1\|4577252_4580108_-\|tRNA	valine--tRNA ligase	A0A1V0SK04	Klosneuvirus	1.3e-140	36.7
4579424:4579440	attL	NA	NA	NA	NA
WP_000786399.1\|4580107_4580551_-	DNA polymerase III subunit chi	NA	NA	NA	NA
WP_000397144.1\|4580904_4582416_-	leucyl aminopeptidase	Q6GYZ8	Mycoplasma_phage	6.0e-47	38.0
WP_000584107.1\|4582682_4583783_+	LPS export ABC transporter permease LptF	NA	NA	NA	NA
WP_001295681.1\|4583782_4584865_+	LPS export ABC transporter permease LptG	NA	NA	NA	NA
WP_032199669.1\|4585025_4586531_-	DUF853 domain-containing protein	A0A248XCZ8	Klebsiella_phage	6.1e-84	44.6
WP_001352285.1\|4586658_4587678_-	NADPH-dependent aldehyde reductase Ahr	A0A0G2Y405	Acanthamoeba_polyphaga_mimivirus	4.9e-45	30.7
WP_000772679.1\|4588121_4589387_+\|integrase	integrase arm-type DNA-binding domain-containing protein	B7SYF8	Stenotrophomonas_phage	4.8e-74	40.5
WP_001254928.1\|4593599_4594751_+\|transposase	IS30-like element IS30 family transposase	W5R8L2	Staphylococcus_phage	2.2e-41	35.3
WP_001323403.1\|4595941_4596721_-	AAA family ATPase	A0A2L1IVB6	Escherichia_phage	1.5e-139	100.0
WP_000255944.1\|4596720_4597743_-\|transposase	IS21-like element IS100 family transposase	A0A2L1IVA1	Escherichia_phage	1.9e-201	100.0
WP_000018562.1\|4598776_4600690_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA
4599523:4599539	attR	NA	NA	NA	NA
WP_001041752.1\|4600926_4602123_+	CoA transferase	NA	NA	NA	NA
WP_000102863.1\|4602134_4603052_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA
WP_000981734.1\|4603072_4604422_+	MFS transporter	NA	NA	NA	NA
WP_000228394.1\|4604776_4605121_+	hypothetical protein	NA	NA	NA	NA
WP_001352291.1\|4605330_4605657_-	hypothetical protein	NA	NA	NA	NA
WP_001352292.1\|4606553_4607000_+	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_000416153.1\|4608350_4609382_-	LacI family DNA-binding transcriptional regulator	C6ZCU4	Enterobacteria_phage	8.0e-19	27.0
WP_000916805.1\|4609652_4610096_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA
WP_000705931.1\|4610111_4610399_+	PTS sugar transporter subunit IIB	NA	NA	NA	NA
WP_000345346.1\|4610411_4611668_+	PTS ascorbate transporter subunit IIC	NA	NA	NA	NA
WP_001446914.1\|4611878_4612118_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	1.5e-13	66.0
WP_115205477.1\|4612503_4613732_-\|transposase	IS3-like element IS2 family transposase	Q9ZXG3	Shigella_phage	2.5e-176	98.7
WP_000107480.1\|4613921_4614935_-	aldose 1-epimerase family protein	NA	NA	NA	NA
WP_000998347.1\|4614946_4616263_-	L-fucose:H+ symporter permease	NA	NA	NA	NA
WP_000350265.1\|4616290_4617211_-	ribokinase	NA	NA	NA	NA
WP_001295538.1\|4617516_4618299_+	DeoR family transcriptional regulator	NA	NA	NA	NA
WP_126123275.1\|4619515_4619626_+	alcohol dehydrogenase	NA	NA	NA	NA
WP_000145475.1\|4619806_4620463_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_001375347.1\|4620710_4621988_-	DUF2254 domain-containing protein	NA	NA	NA	NA
WP_032215506.1\|4622050_4624048_-\|holin	choline BCCT transporter BetT	A0A2I7QNT1	Vibrio_phage	5.7e-21	25.9

DBSCAN-SWA_10

4653377 : 4658707

Stx2-converting_phage(50.0%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_001234729.1\|4653377_4654196_+	DUF945 domain-containing protein	A0A2C9CX26	Yersinia_phage	4.2e-47	40.1
WP_000855059.1\|4654537_4655011_+	antirestriction protein	A9J566	Pseudomonas_phage	1.5e-12	30.3
WP_001186774.1\|4655026_4655503_+	RadC family protein	NA	NA	NA	NA
WP_000692345.1\|4655565_4655787_+	DUF987 domain-containing protein	A0A142F0X9	Klebsiella_phage	1.9e-10	45.8
WP_001295723.1\|4655949_4656318_+	type IV toxin-antitoxin system YeeU family antitoxin	NA	NA	NA	NA
WP_001333339.1\|4656374_4657910_-\|transposase	IS66-like element ISEc22 family transposase	A0A0P0ZEB3	Stx2-converting_phage	3.5e-289	99.4
WP_000612626.1\|4657958_4658306_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZDM8	Stx2-converting_phage	2.6e-62	100.0
WP_000839179.1\|4658302_4658707_-	IS66 family insertion sequence hypothetical protein	A0A0P0ZCV4	Stx2-converting_phage	3.0e-70	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

3. NZ_CP010372

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

65248 : 110944

Escherichia_phage(44.44%)

transposase

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_023149734.1\|65248_66820_+\|transposase	IS66 family transposase	A0A0P0ZEB3	Stx2-converting_phage	4.9e-169	58.5
WP_000968309.1\|67574_67757_+	hypothetical protein	NA	NA	NA	NA
WP_015387399.1\|67943_68150_+	type I toxin-antitoxin system Hok family toxin	NA	NA	NA	NA
WP_000083833.1\|68433_68691_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_032336874.1\|68926_69001_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_000410951.1\|70760_71981_+	arginine deiminase	NA	NA	NA	NA
WP_000440183.1\|71991_72903_+	carbamate kinase	NA	NA	NA	NA
WP_000154545.1\|72987_73992_+	ornithine carbamoyltransferase	NA	NA	NA	NA
WP_000514417.1\|74039_75443_+	YfcC family protein	NA	NA	NA	NA
WP_001496175.1\|75523_76003_+	ArgR family transcriptional regulator	NA	NA	NA	NA
WP_000080227.1\|76359_76581_-	hypothetical protein	NA	NA	NA	NA
WP_000624725.1\|76611_76962_-	IS66 family insertion sequence element accessory protein TnpB	A0A0P0ZBY2	Stx2-converting_phage	4.7e-40	66.4
WP_059330006.1\|76958_77321_-	IS66 family insertion sequence hypothetical protein	Q6H9S5	Enterobacteria_phage	9.0e-34	88.5
WP_032152936.1\|78159_78738_+	DUF2726 domain-containing protein	NA	NA	NA	NA
WP_000005489.1\|79150_79504_-	hypothetical protein	NA	NA	NA	NA
WP_000156883.1\|79975_80998_-\|transposase	IS110 family transposase	NA	NA	NA	NA
WP_000083821.1\|81402_81660_+	replication regulatory protein RepA	NA	NA	NA	NA
WP_001365705.1\|81894_81969_+	RepA leader peptide Tap	NA	NA	NA	NA
WP_032152935.1\|81961_82819_+	incFII family plasmid replication initiator RepA	NA	NA	NA	NA
WP_001067855.1\|82966_83671_-\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000656305.1\|83921_84299_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_001138064.1\|84365_87332_-\|transposase	Tn3-like element TnAs3 family transposase	A0A1B0V7H9	Salmonella_phage	0.0e+00	73.6
WP_001067855.1\|87509_88214_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0
WP_000412211.1\|88287_88947_-	type A-1 chloramphenicol O-acetyltransferase	G3CFL0	Escherichia_phage	8.4e-131	100.0
WP_049802299.1\|89919_90183_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA
WP_000460651.1\|90175_90562_+	hypothetical protein	NA	NA	NA	NA
WP_001284954.1\|90569_91256_+	winged helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_000088605.1\|91233_91857_-	tetracycline resistance transcriptional repressor TetR(B)	NA	NA	NA	NA
WP_001089068.1\|91938_93144_+	tetracycline efflux MFS transporter Tet(B)	NA	NA	NA	NA
WP_000428546.1\|93256_93850_-	tetracyline resistance-associated transcriptional repressor TetC	NA	NA	NA	NA
WP_187440355.1\|93982_94354_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_000449408.1\|96701_96860_+	DsbA family protein	NA	NA	NA	NA
WP_000949452.1\|96849_97356_+	protein disulfide oxidoreductase	NA	NA	NA	NA
WP_012372823.1\|97538_98354_+	Na(+)-translocating NADH-quinone reductase subunit C	NA	NA	NA	NA
WP_000118029.1\|98700_100587_+	FTR1 family iron permease	NA	NA	NA	NA
WP_000178050.1\|100627_101155_+	iron transporter	NA	NA	NA	NA
WP_000119836.1\|101258_102638_+	DUF2318 domain-containing protein	NA	NA	NA	NA
WP_000964653.1\|102640_103924_+	ABC transporter permease	NA	NA	NA	NA
WP_000729219.1\|103913_105044_+	ABC transporter permease	NA	NA	NA	NA
WP_000117262.1\|105048_105744_+	ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	7.5e-29	38.9
WP_001267176.1\|105730_106216_+	TlpA family protein disulfide reductase	NA	NA	NA	NA
WP_000874189.1\|106240_106726_+	hypothetical protein	NA	NA	NA	NA
WP_001067855.1\|110239_110944_+\|transposase	IS6-like element IS26 family transposase	A0A077SL39	Escherichia_phage	1.8e-139	100.0

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP010373

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP010371

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

3. NZ_CP010372

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection