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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP010427 Allofrancisella guangzhouensis strain 08HL01032 chromosome, complete genome 1 crisprs DEDDh,RT,csa3,cas2,cas3 0 0 139 0
NZ_CP010428 Allofrancisella guangzhouensis strain 08HL01032 plasmid unnamed1, complete sequence 0 crisprs NA 0 0 0 0

Results visualization

1. NZ_CP010427
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP010427_1 34385-34503 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 0 : 2104 2 Staphylococcus_prophage(100.0%) transposase NA
DBSCAN-SWA_2 5862 : 15301 10 Tetraselmis_virus(12.5%) NA NA
DBSCAN-SWA_3 20226 : 23951 3 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_4 43022 : 44117 1 Thermus_phage(100.0%) NA NA
DBSCAN-SWA_5 53678 : 54767 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_6 59434 : 67864 8 Streptococcus_phage(40.0%) NA NA
DBSCAN-SWA_7 72126 : 79709 2 uncultured_virus(50.0%) NA NA
DBSCAN-SWA_8 83842 : 93464 7 Bacillus_phage(25.0%) transposase,tRNA NA
DBSCAN-SWA_9 99517 : 100942 1 Ectocarpus_siliculosus_virus(100.0%) NA NA
DBSCAN-SWA_10 111152 : 112454 1 Moraxella_phage(100.0%) NA NA
DBSCAN-SWA_11 122465 : 132521 10 Bacillus_virus(25.0%) transposase NA
DBSCAN-SWA_12 148027 : 155585 6 Bodo_saltans_virus(66.67%) tRNA NA
DBSCAN-SWA_13 167388 : 169265 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_14 180024 : 180603 1 Bacillus_thuringiensis_phage(100.0%) NA NA
DBSCAN-SWA_15 184072 : 187575 3 Catovirus(50.0%) tRNA NA
DBSCAN-SWA_16 196190 : 205298 9 Staphylococcus_phage(28.57%) tRNA NA
DBSCAN-SWA_17 209345 : 214366 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_18 217885 : 222626 7 Vibrio_phage(33.33%) NA NA
DBSCAN-SWA_19 238165 : 239527 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_20 268809 : 280182 9 Acinetobacter_phage(28.57%) NA NA
DBSCAN-SWA_21 284036 : 285140 1 Rhizobium_phage(100.0%) NA NA
DBSCAN-SWA_22 289049 : 289970 1 Paramecium_bursaria_Chlorella_virus(100.0%) NA NA
DBSCAN-SWA_23 293353 : 294523 1 Halovirus(100.0%) NA NA
DBSCAN-SWA_24 297573 : 299433 1 Lactococcus_phage(100.0%) NA NA
DBSCAN-SWA_25 304423 : 305740 1 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_26 334281 : 337900 2 Hokovirus(50.0%) tRNA NA
DBSCAN-SWA_27 341258 : 351879 9 Morganella_phage(40.0%) NA NA
DBSCAN-SWA_28 356744 : 357341 1 Caulobacter_phage(100.0%) NA NA
DBSCAN-SWA_29 361435 : 364012 1 Agrobacterium_phage(100.0%) NA NA
DBSCAN-SWA_30 379361 : 380981 1 Streptococcus_virus(100.0%) NA NA
DBSCAN-SWA_31 388565 : 389885 1 Phage_TP(100.0%) tRNA NA
DBSCAN-SWA_32 393063 : 400158 3 Mollivirus(33.33%) NA NA
DBSCAN-SWA_33 415288 : 416623 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_34 427778 : 432430 3 Pseudomonas_phage(66.67%) NA NA
DBSCAN-SWA_35 440859 : 441348 1 Cyanophage(100.0%) NA NA
DBSCAN-SWA_36 463591 : 476328 11 Klosneuvirus(20.0%) tRNA NA
DBSCAN-SWA_37 494888 : 495389 1 Geobacillus_virus(100.0%) NA NA
DBSCAN-SWA_38 500082 : 505825 7 Flavobacterium_phage(33.33%) NA NA
DBSCAN-SWA_39 519740 : 523962 3 uncultured_Mediterranean_phage(33.33%) NA NA
DBSCAN-SWA_40 532558 : 533449 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_41 536902 : 539122 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_42 543519 : 547144 4 Acanthocystis_turfacea_Chlorella_virus(50.0%) NA NA
DBSCAN-SWA_43 550821 : 567213 12 Hokovirus(14.29%) tRNA NA
DBSCAN-SWA_44 572022 : 573426 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_45 585952 : 588331 1 Mycobacterium_phage(100.0%) NA NA
DBSCAN-SWA_46 599342 : 600287 1 Staphylococcus_prophage(100.0%) transposase NA
DBSCAN-SWA_47 603974 : 605360 1 Moumouvirus(100.0%) tRNA NA
DBSCAN-SWA_48 612414 : 613359 1 Staphylococcus_prophage(100.0%) transposase NA
DBSCAN-SWA_49 618778 : 621451 3 Anomala_cuprea_entomopoxvirus(50.0%) NA NA
DBSCAN-SWA_50 625668 : 626181 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_51 637372 : 638317 1 Staphylococcus_prophage(100.0%) transposase NA
DBSCAN-SWA_52 650531 : 653682 6 Vibrio_phage(50.0%) NA NA
DBSCAN-SWA_53 657488 : 659531 1 Ralstonia_phage(100.0%) NA NA
DBSCAN-SWA_54 666615 : 671926 4 Leptospira_phage(50.0%) integrase attL 665492:665506|attR 668021:668035
DBSCAN-SWA_55 677805 : 679113 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_56 683154 : 684537 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_57 688955 : 690365 1 Erysipelothrix_phage(100.0%) NA NA
DBSCAN-SWA_58 694533 : 695076 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_59 700893 : 701880 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_60 710618 : 713998 2 Harp_seal_herpesvirus(50.0%) NA NA
DBSCAN-SWA_61 729800 : 733035 2 Bacillus_virus(100.0%) NA NA
DBSCAN-SWA_62 740689 : 753627 14 Streptococcus_phage(22.22%) NA NA
DBSCAN-SWA_63 777558 : 781994 3 Micromonas_pusilla_virus(50.0%) NA NA
DBSCAN-SWA_64 786014 : 803030 19 uncultured_Mediterranean_phage(33.33%) transposase,tRNA NA
DBSCAN-SWA_65 806810 : 811408 4 Agrobacterium_phage(25.0%) protease NA
DBSCAN-SWA_66 824203 : 829132 5 Synechococcus_phage(33.33%) NA NA
DBSCAN-SWA_67 833853 : 837713 7 Haemophilus_phage(33.33%) NA NA
DBSCAN-SWA_68 840997 : 841567 1 Emiliania_huxleyi_virus(100.0%) NA NA
DBSCAN-SWA_69 846777 : 849919 2 Bathycoccus_sp._RCC1105_virus(50.0%) NA NA
DBSCAN-SWA_70 856167 : 856920 1 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_71 862264 : 863956 1 Catovirus(100.0%) NA NA
DBSCAN-SWA_72 870040 : 873800 4 Planktothrix_phage(33.33%) NA NA
DBSCAN-SWA_73 881535 : 882561 1 Acinetobacter_phage(100.0%) NA NA
DBSCAN-SWA_74 889757 : 896666 8 uncultured_Mediterranean_phage(33.33%) tRNA NA
DBSCAN-SWA_75 907207 : 908185 1 Salmonella_phage(100.0%) transposase NA
DBSCAN-SWA_76 913998 : 922824 9 Salmonella_phage(20.0%) protease,transposase,tRNA NA
DBSCAN-SWA_77 928723 : 930877 1 Streptococcus_phage(100.0%) NA NA
DBSCAN-SWA_78 934622 : 936820 2 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_79 940403 : 944185 4 Acinetobacter_phage(50.0%) NA NA
DBSCAN-SWA_80 950110 : 957587 6 Bacillus_virus(20.0%) NA NA
DBSCAN-SWA_81 963512 : 966381 2 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_82 970568 : 972266 1 Klosneuvirus(100.0%) NA NA
DBSCAN-SWA_83 981031 : 981604 1 Abalone_herpesvirus(100.0%) NA NA
DBSCAN-SWA_84 987399 : 990693 3 Phaeocystis_globosa_virus(33.33%) tRNA NA
DBSCAN-SWA_85 994366 : 995539 1 unidentified_phage(100.0%) NA NA
DBSCAN-SWA_86 1013338 : 1015354 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_87 1022797 : 1024381 1 uncultured_Caudovirales_phage(100.0%) NA NA
DBSCAN-SWA_88 1029410 : 1037164 8 Stx2-converting_phage(16.67%) tRNA NA
DBSCAN-SWA_89 1040800 : 1044003 2 Tupanvirus(50.0%) NA NA
DBSCAN-SWA_90 1049560 : 1060469 11 Tupanvirus(16.67%) transposase NA
DBSCAN-SWA_91 1063710 : 1086023 23 Salmonella_phage(11.11%) transposase,tRNA NA
DBSCAN-SWA_92 1091556 : 1092339 1 Chrysochromulina_ericina_virus(100.0%) NA NA
DBSCAN-SWA_93 1096139 : 1097690 1 Hokovirus(100.0%) NA NA
DBSCAN-SWA_94 1101605 : 1104538 3 Niemeyer_virus(50.0%) NA NA
DBSCAN-SWA_95 1110112 : 1111579 1 Micromonas_sp._RCC1109_virus(100.0%) NA NA
DBSCAN-SWA_96 1114852 : 1118258 3 Erysipelothrix_phage(33.33%) tRNA NA
DBSCAN-SWA_97 1128715 : 1139121 13 Pseudomonas_phage(20.0%) tRNA NA
DBSCAN-SWA_98 1144633 : 1151056 4 Synechococcus_phage(33.33%) tRNA NA
DBSCAN-SWA_99 1155092 : 1155566 1 Fowlpox_virus(100.0%) NA NA
DBSCAN-SWA_100 1159043 : 1161645 2 Hokovirus(50.0%) NA NA
DBSCAN-SWA_101 1169554 : 1173027 3 Ostreococcus_lucimarinus_virus(50.0%) NA NA
DBSCAN-SWA_102 1187253 : 1191805 5 Escherichia_phage(33.33%) tRNA NA
DBSCAN-SWA_103 1205457 : 1208258 2 Lake_Baikal_phage(50.0%) NA NA
DBSCAN-SWA_104 1212233 : 1221674 9 Tupanvirus(50.0%) transposase NA
DBSCAN-SWA_105 1226426 : 1227818 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_106 1232244 : 1235091 4 Streptococcus_phage(50.0%) NA NA
DBSCAN-SWA_107 1238847 : 1248445 9 Organic_Lake_phycodnavirus(50.0%) transposase,tRNA NA
DBSCAN-SWA_108 1252665 : 1253529 1 Trichoplusia_ni_ascovirus(100.0%) NA NA
DBSCAN-SWA_109 1262860 : 1264714 1 Tupanvirus(100.0%) NA NA
DBSCAN-SWA_110 1275731 : 1280822 4 Escherichia_phage(33.33%) tRNA NA
DBSCAN-SWA_111 1293643 : 1297352 4 Staphylococcus_prophage(33.33%) transposase NA
DBSCAN-SWA_112 1310222 : 1313042 1 uncultured_Mediterranean_phage(100.0%) NA NA
DBSCAN-SWA_113 1316495 : 1323061 5 Klosneuvirus(33.33%) NA NA
DBSCAN-SWA_114 1327642 : 1327846 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_115 1333207 : 1334488 1 uncultured_Mediterranean_phage(100.0%) tRNA NA
DBSCAN-SWA_116 1339610 : 1345040 6 Microcystis_phage(50.0%) NA NA
DBSCAN-SWA_117 1348511 : 1349381 1 Salmonella_phage(100.0%) NA NA
DBSCAN-SWA_118 1353811 : 1356628 2 Prochlorococcus_phage(100.0%) NA NA
DBSCAN-SWA_119 1361581 : 1362268 1 Planktothrix_phage(100.0%) NA NA
DBSCAN-SWA_120 1365679 : 1432432 63 Klosneuvirus(11.11%) transposase NA
DBSCAN-SWA_121 1435614 : 1440595 5 uncultured_marine_virus(25.0%) NA NA
DBSCAN-SWA_122 1443837 : 1449606 2 Megavirus(50.0%) NA NA
DBSCAN-SWA_123 1453522 : 1455208 1 Hepacivirus(100.0%) NA NA
DBSCAN-SWA_124 1462459 : 1467048 5 Acidovorax_phage(33.33%) NA NA
DBSCAN-SWA_125 1470237 : 1480837 11 Tupanvirus(16.67%) tRNA NA
DBSCAN-SWA_126 1487587 : 1496790 7 Staphylococcus_prophage(25.0%) transposase,tRNA NA
DBSCAN-SWA_127 1501758 : 1502586 1 Enterococcus_phage(100.0%) NA NA
DBSCAN-SWA_128 1509533 : 1516952 3 Bacillus_phage(50.0%) NA NA
DBSCAN-SWA_129 1522912 : 1525027 1 Bacillus_phage(100.0%) NA NA
DBSCAN-SWA_130 1533523 : 1536506 4 Pneumococcus_phage(33.33%) protease NA
DBSCAN-SWA_131 1546708 : 1546912 1 Morganella_phage(100.0%) NA NA
DBSCAN-SWA_132 1563751 : 1568039 3 Paramecium_bursaria_Chlorella_virus(33.33%) NA NA
DBSCAN-SWA_133 1571148 : 1576312 2 Powai_lake_megavirus(50.0%) NA NA
DBSCAN-SWA_134 1587242 : 1591085 4 Moumouvirus(50.0%) NA NA
DBSCAN-SWA_135 1599651 : 1601610 2 uncultured_virus(100.0%) NA NA
DBSCAN-SWA_136 1604883 : 1607593 3 Bacillus_virus(50.0%) NA NA
DBSCAN-SWA_137 1614993 : 1620136 4 uncultured_Mediterranean_phage(50.0%) tRNA NA
DBSCAN-SWA_138 1625456 : 1627109 1 Micromonas_pusilla_virus(100.0%) NA NA
DBSCAN-SWA_139 1641301 : 1652545 10 Indivirus(16.67%) tRNA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage