CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007773	Campylobacter subantarcticus LMG 24377 chromosome, complete genome	2 crisprs	cas4,csa3,DEDDh	0	1	4	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007773_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007773_1

643067-643263

Unclear

Consensus_repeat	Method
AAAGTCCTTTATATATCCCCAAAAAGTCCTTTATAAA	CRISPRCasFinder

2 spacers

The CRISPR arrays of NZ_CP007773_1

>merge|NZ_CP007773|1|643067-643263|CRISPRCasFinder
AAAGTCCTTTATATATCCCCAAAAAGTCCTTTATAAATGTTAAAATATTCAATTTTTAAGTAAATATTAAGTATAAATATTTTTATTTTTGTTTAAAGTCCTTTATATATCCCCAAAAAGTCCTTTATAAAGAACTTTAAAGTCCTTTATATATCCCCAAAAAGTCCTTTATATATCCCCAAAAAGTCCTTTATAAA

>NZ_CP007773|1|1|643067-643263|CRISPRCasFinder
AAAGTCCTTTATATATCCCCAAAAAGTCCTTTATAAA	TGTTAAAATATTCAATTTTTAAGTAAATATTAAGTATAAATATTTTTATTTTTGTTT
AAAGTCCTTTATATATCCCCAAAAAGTCCTTTATAAA	GAACTTTAAAGTCCTTTATATATCCCCAA
AAAGTCCTTTATATATCCCCAAAAAGTCCTTTATAAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007773.1\|WP_043019626.1\|644611_645064_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019622.1\|641756_642017_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019627.1\|645151_645721_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_158336963.1\|642565_642727_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019628.1\|645762_646290_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019629.1\|646323_646824_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019625.1\|644264_644591_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019631.1\|647355_649500_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|273711
NZ_CP007773.1\|WP_043019620.1\|640358_640757_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370597
NZ_CP007773.1\|WP_043019624.1\|643336_644251_+\|plasmid-segregation-protein-ParM	unknown	unknown	gnl\|CDD\|212669
NZ_CP007773.1\|WP_043019621.1\|641230_641623_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019618.1\|638940_639414_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_082019365.1\|639915_640362_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|370597
NZ_CP007773.1\|WP_052243660.1\|640756_641194_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_052243661.1\|646845_647025_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019632.1\|649510_650872_-\|conjugative-transfer-system-protein-TraD	unknown	unknown	gnl\|CDD\|274760
NZ_CP007773.1\|WP_158336965.1\|642713_642887_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019623.1\|642026_642569_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019630.1\|647057_647369_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019619.1\|639415_639889_-\|hypothetical-protein	unknown	unknown	unknown

Protein	Function_ID	Function_description	E-value
NZ_CP007773.1\|WP_043019631.1\|647355_649500_-\|HD-domain-containing-protein	gnl\|CDD\|273711	TIGR01596, CRISPR-associated_endonuclease_Cas3-HD, CRISPR-associated endonuclease Cas3-HD. CRISPR/Cas systems are widespread, mobile systems for host defense against invasive elements such as phage. In these systems, Cas3 designates one of the core proteins shared widely by multiple types of CRISPR/Cas system. This model represents an HD-like endonuclease that occurs either separately or as the N-terminal region of Cas3, the helicase-containing CRISPR-associated protein.	0.00187159
NZ_CP007773.1\|WP_082019365.1\|639915_640362_-\|hypothetical-protein	gnl\|CDD\|370597	pfam09643, YopX, YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	4.26312e-09
NZ_CP007773.1\|WP_043019620.1\|640358_640757_-\|hypothetical-protein	gnl\|CDD\|370597	pfam09643, YopX, YopX protein. YopX is a protein that is largely helical, with three identical chains probably complexing into a twelve-chain structure.	1.36207e-05
NZ_CP007773.1\|WP_043019632.1\|649510_650872_-\|conjugative-transfer-system-protein-TraD	gnl\|CDD\|274760	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily. Members of this protein family are the putative conjugative coupling factor, TraD (or TraG), rather distantly related to the well-characterized TraD of the F plasmid. Members are associated with conjugative-transposon-like mobile genetic elements of the class that includes SXT, an antibiotic resistance transfer element in some Vibrio cholerae strains. [Mobile and extrachromosomal element functions, Other].	2.28144e-44
NZ_CP007773.1\|WP_043019624.1\|643336_644251_+\|plasmid-segregation-protein-ParM	gnl\|CDD\|212669	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins. ParM is a plasmid-encoded bacterial homolog of actin, which polymerizes into filaments similar to F-actin, and plays a vital role in plasmid segregation. ParM filaments segregate plasmids paired at midcell into the individual daughter cells. This subfamily also contains Thermoplasma acidophilum Ta0583, an active ATPase at physiological temperatures, which has a propensity to form filaments.	9.33036e-46

>NZ_CP007773.1|WP_158336965.1|642713_642887_-|hypothetical-protein
MSSEFELLITKNDLQTQQYYKKIGKLIAKICKKEKLNIDNSCYMITLIAKEKYNEHK
>NZ_CP007773.1|WP_158336963.1|642565_642727_-|hypothetical-protein
MNTSKLNQVEIINKECLELVNYMEECDEDELRDNLMDLKILLVKIKEVLKGEK
>NZ_CP007773.1|WP_043019623.1|642026_642569_-|hypothetical-protein
MIRKQFNEIKERLTKYREIRHLTYENQQAEFLGNAFEKVSEYFRAKNDLERIDALCDIAVFCFNAFDFTYKMLKDYEPRFYTITSANIAYITRCVSDFICYDDDSKIDISKYNLTAIILYLEQTCKKLGFDFYKCMIETIKEIESRTGYYDNELKKFVKDTSDEAKSKWYKADYEGCKLQ
>NZ_CP007773.1|WP_043019622.1|641756_642017_-|hypothetical-protein
MITNKQIFDECVKIHETIINNGEAEAKEKILCLLDKIKDKSKYPPILNHLLRQLGMYSYMNENTSILTDRIALECFKIKNKESKSE
>NZ_CP007773.1|WP_043019621.1|641230_641623_-|hypothetical-protein
MSSRDFLKIPNENGEFNIIVKRFSYERENYDRNNAFDQILGRYETYYFQPCFRVDYNSDKIIRKDILWEKESVLGSKSKGFAIASEDDFKEYCRKEFNEFRETLCLNPFSNKKEPEYSDDYICSLEAHLF
>NZ_CP007773.1|WP_052243660.1|640756_641194_-|hypothetical-protein
MKLVKINNTYIVAETIKSFRIFQDENFIALEIFNGKKYTEYFEIFQSGKMERYYLFGANQNSKTKNILNDIDILTQKLCEVISNNLVETLALVESRKEDISFRLDDEITEILEKSELVKNIKKLVKEYENEKSNKCFLKIFKGDK
>NZ_CP007773.1|WP_043019620.1|640358_640757_-|hypothetical-protein
MKLKDFDFRIWDENHKSCGNKDCKCQSKYTLGEHAKNMLSEFIGKDVEIELWTRIIDRNGKKVYENDIVRMKSPYDCFIAKISIHKEGTFYLEGKNGDYMGSLIYLVEDEAYTIEIIGNIHENKNLLKRIEE
>NZ_CP007773.1|WP_082019365.1|639915_640362_-|hypothetical-protein
MKLKDFDFRVWDNHNKKYIDSFPYSIKKYQNENEVFLPFSTDLREYGINETFKDEIQMPSDRVEIELWTGLYDKNGEKIYENDILYLFEDCSEGEAFKYKVVLKEGAFYLVECGDNGEEYDEDLISEFQLTELEIMGNIHENHKLLEY
>NZ_CP007773.1|WP_043019619.1|639415_639889_-|hypothetical-protein
MNDKEIKLKLSYSEEVLKILIMISLSILIIYKVEILTFLGVDFYSFDKGYFDSIFVYINTYFLYLMFLIPHPDELPLVDDNTSFMNYCGIVIIYGFVVAFLSVVFCIGFLLILKEEFFELFFGDLNNSFLLYILIGLIWADYLNNCIHMIKSAKVKA
>NZ_CP007773.1|WP_043019618.1|638940_639414_-|hypothetical-protein
MINFILDLEYLIGSIMAPLLIVSLGFYRYFNIKVIISLFFICFFLILATFSAKPDEKFINSLKENNISQELLEKLNKNETLGFRFCKMTSYNGETCHDYLKYVISSLKTKQEELKKRTSKKLQKEQFEKQKEQFELNNKNKNIENIVENSFKAKDKE
>NZ_CP007773.1|WP_043019624.1|643336_644251_+|plasmid-segregation-protein-ParM
MQTQKIAIDIGYGDTKVFFNDKLFKFPSAIEQVRQTQVDLKEEKVDVYSYNGVHFRVGEKALLNAIATRGFNFLTKYSPLLVFHAFKLAGVDLNKPIELATGLSLLNFHKSKEFIEILNDFSINKEYIKLDVTLFAQGQGIFLENKNEQDEIVGIIDIGYNTLDFLVFDKDSPRSDYCFANQNGANKIIVDLQKMLTKEFKANISEQEAKKAFVNKSIKVLGEVVDLEDTIKTMTFSYMDMILDEVYNNCNDILVRADKIILGGGGAYFLDEESIKDKYSNMIMAKTPHEFSNVRGYFLGAFKE
>NZ_CP007773.1|WP_043019625.1|644264_644591_+|hypothetical-protein
MAVSTSIKITINNEKVKEILDQVPKVIRGAFIENAILDFASRNPKIEFHFDGVTKTKRTRRTKAQMQEAKNNKTNTHEDTCKSINNDNKEDDKAGNKKNRVMFNFDKK
>NZ_CP007773.1|WP_043019626.1|644611_645064_+|hypothetical-protein
MDLINLFLNLSDIGLFILFFILAMLLYVFFSFTDNFFLFRVIFALLLITTASFFAIKKDNIIFMPDKYYVEKLVKKYDLDNIKDKELFKSVLKSQTIGFAVCSFSNYENSLCVEYLKYFEKKLIEYKNGNTENIDKYFGDNQRTKEADNE
>NZ_CP007773.1|WP_043019627.1|645151_645721_+|hypothetical-protein
MKKINAIIHILLTILFLIWFFNNEEFISRLKILILDFLAINNDENSFNPVINMVIMALVMLIIVIIFASYKFFDSLFSNNKEFIFYAPLLAIPIYCVFFGFIITIFFGGDETYALFNSDNGYVVERGNDIKVYYKGKLVNVANAIHFKSYKESFENGVFKIDFFDKEDKILMQVFCGENNERSCRVVGR
>NZ_CP007773.1|WP_043019628.1|645762_646290_+|hypothetical-protein
MKLIKSLKNKIIFSQTSFDISMVLAIFSPIFIVPFLICLSDLEENSKSQIILAFVFICLYITFVLALCLKEEFEKSSYDFISKFNKTLEIELKYELEKINYSIDINAINFISFALIKCKNDYEKGKIDKDFINKTKEYYIKLFKKLIAEELKLQNKELILKSNQNEILKIMQDRH
>NZ_CP007773.1|WP_043019629.1|646323_646824_-|hypothetical-protein
MLNILPQTTQDQEKIFLIDENLALCESGKILYYDDLGQLQDTDYECILDEINEHTSLKDIFNNIINLKDFVVNGYYLLNLIDFKIDNIDFSIQDDIVSFRDYKINLDSLEIQGKMIELDKDLSLVEELQNISAYDLDYIKAIVCAIYRKNITGFIEKEKLLKSFSS
>NZ_CP007773.1|WP_052243661.1|646845_647025_-|hypothetical-protein
MASEGLSDTRLSEITGIPLSTLNEWKKEKDRKFIYRIYKILKTSSESEIAKFFKPKKNQ
>NZ_CP007773.1|WP_043019630.1|647057_647369_-|hypothetical-protein
MPQNKKTHLLNKRDSQIVILESKEAKILLDLAKKTDEIFTLIRKNAGNSINIDKANNTIKAWNDFLIETSCYIKEINKDLNIEYLEPISIVLLKEEMKTLKQI
>NZ_CP007773.1|WP_043019631.1|647355_649500_-|HD-domain-containing-protein
MLEIIENLMKFIYTHKKVREFIYYFIISIAGFLLFVFVLLNINIGVQKSNLSLLFNSQTYYYLFNIYQREIAIFLIIEQIILLSFIYYQNHKLNQHIKNSKKDELQVIHIKDLSKLWIEEESIILNDPLKQSLKRKYQPLAHTKNEDLLSIAHFKNDNIILFLEKSIKPYLNILESEELKAIVKLLHILEDNSKAPSVVPNKNDPNATYGFGHLKNIVEPLTLDGKTRFDIFYTISLLDHTLEVARNTIDTIESNKNFKKKDILAQAIISALAHDIGKIEKYKMQDKSKDFIALKEQPHHVISNIILYDSFKTLPNLDQIAKAVINHHSGAIAKEDVLLKLLVDCDKQTREKEIHSYLVKYNAFESNKAVTFRKNIFTQLQTLEEKNNYSLLIIKSKDEQLKSTAIKEFIQDESIINFSNEDNKLIMLIQEKSKNKIMANILTPIISFCTEEGIFIKTILINLQDIEYLDKTYMKNIIKELFDHIQNKETNFIHYADYKKIKHSKISISDNSTTEESKTHNEDKSSKSKEIITQIKDKLQTKTAQENQEKILQLKTDESAEEGFDIQNIEKLFLDKLKNKINTIEYYGTKNEINSISHKNFVLFKKSCLIKILGELIGGDSESLDRKVNFLIKYYKNHQDEDKRLVWFVNTDSGFYESLFYIYENGEKEVFSCIPFEAKLAFNLDSYELEKIKEKSDLKKYNIGKYRGEKNATK
>NZ_CP007773.1|WP_043019632.1|649510_650872_-|conjugative-transfer-system-protein-TraD
MSFFNKNKDTLNNKMFIGKGFSLDDKKREKLVDIYLEDDNCFNHSFVFGSTGVGKTRLIEGLIEQDIPKQNNIVIIDPKGDIGLFSKVTEIAKKHNREKDLLFLSPIYPDYSIKINPLKNYSMEEEIISHIVASVPAKDEFFYNIALETTTVIVKSLLIIRRYNKDESALNFDEVSSKASYNGLKDLRETLENIKDDTEEERELEKILETLTRVIESPADYFSKVSSTLRTTLTQMTTGNVGKIMGNTFDNVFINRLEKDEGVILYVMTGSLLTRQVSSIISKVTLSMIQSCVGRIYSSGRKFKHPLKIYIDEAASSLYRGIEVIYAQARGAKVAMMGLTQSTADIVEEIGQDAANKLLELTNTKIIMRLNDTKSAKVISDLGGKRKDFSYFLSLNGGINSREVEELNIEIDDVTNLQKREFYYFGFEGRFKGKTLRVKDGKLLIQMPDLTSK

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Crispr_ID: NZ_CP007773_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007773_2

653309-653400

Unclear

Consensus_repeat	Method
TAAATATCTATTTTATAGTGCTTTGGAG	CRISPRCasFinder

1 spacers

cas4

The CRISPR arrays of NZ_CP007773_2

>merge|NZ_CP007773|2|653309-653400|CRISPRCasFinder
TAAATATCTATTTTATAGTGCTTTGGAGCGATTTTGAATTTCGCAAAAAAAGCAAAAACCTTTCTAAATATCTATTTTATAGTGCTTTGGAG

>NZ_CP007773|2|2|653309-653400|CRISPRCasFinder
TAAATATCTATTTTATAGTGCTTTGGAG	CGATTTTGAATTTCGCAAAAAAAGCAAAAACCTTTC
TAAATATCTATTTTATAGTGCTTTGGAG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007773.1\|WP_052243663.1\|660806_661391_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019631.1\|647355_649500_-\|HD-domain-containing-protein	unknown	unknown	gnl\|CDD\|273711
NZ_CP007773.1\|WP_043019627.1\|645151_645721_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_052243662.1\|657035_658016_+\|DUF285-domain-containing-protein	unknown	unknown	gnl\|CDD\|308794
NZ_CP007773.1\|WP_043019632.1\|649510_650872_-\|conjugative-transfer-system-protein-TraD	unknown	unknown	gnl\|CDD\|274760
NZ_CP007773.1\|WP_043019629.1\|646323_646824_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_167333021.1\|658603_658750_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019638.1\|656071_656896_+\|phage-recombination-protein-Bet	unknown	unknown	gnl\|CDD\|367688
NZ_CP007773.1\|WP_043019634.1\|651679_652366_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|273893
NZ_CP007773.1\|WP_043019639.1\|658178_658607_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019637.1\|655171_655627_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|236275
NZ_CP007773.1\|WP_043019640.1\|659035_659995_+\|Dna2/Cas4-domain-containing-protein	cas4	cd09637_cas4_CAS-I:CAS-II:CAS-V	gnl\|CDD\|273040
NZ_CP007773.1\|WP_043019633.1\|650880_651678_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019641.1\|660315_660705_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_052243661.1\|646845_647025_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019628.1\|645762_646290_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019642.1\|661494_661713_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019630.1\|647057_647369_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007773.1\|WP_043019635.1\|652658_653168_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP007773.1\|WP_043019636.1\|654434_654866_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|380640

Protein	Function_ID	Function_description	E-value
NZ_CP007773.1\|WP_043019637.1\|655171_655627_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|236275	PRK08486, PRK08486, single-stranded DNA-binding protein; Provisional.	3.88663e-44
NZ_CP007773.1\|WP_043019631.1\|647355_649500_-\|HD-domain-containing-protein	gnl\|CDD\|273711	TIGR01596, CRISPR-associated_endonuclease_Cas3-HD, CRISPR-associated endonuclease Cas3-HD. CRISPR/Cas systems are widespread, mobile systems for host defense against invasive elements such as phage. In these systems, Cas3 designates one of the core proteins shared widely by multiple types of CRISPR/Cas system. This model represents an HD-like endonuclease that occurs either separately or as the N-terminal region of Cas3, the helicase-containing CRISPR-associated protein.	0.00187159
NZ_CP007773.1\|WP_052243662.1\|657035_658016_+\|DUF285-domain-containing-protein	gnl\|CDD\|308794	pfam03382, DUF285, Mycoplasma protein of unknown function, DUF285. This region appears distantly related to leucine rich repeats.	2.6504e-49
NZ_CP007773.1\|WP_043019632.1\|649510_650872_-\|conjugative-transfer-system-protein-TraD	gnl\|CDD\|274760	TIGR03743, SXT_TraD, conjugative coupling factor TraD, SXT/TOL subfamily. Members of this protein family are the putative conjugative coupling factor, TraD (or TraG), rather distantly related to the well-characterized TraD of the F plasmid. Members are associated with conjugative-transposon-like mobile genetic elements of the class that includes SXT, an antibiotic resistance transfer element in some Vibrio cholerae strains. [Mobile and extrachromosomal element functions, Other].	2.28144e-44
NZ_CP007773.1\|WP_043019638.1\|656071_656896_+\|phage-recombination-protein-Bet	gnl\|CDD\|367688	pfam03837, RecT, RecT family. The DNA single-strand annealing proteins (SSAPs), such as RecT, Red-beta, ERF and Rad52, function in RecA-dependent and RecA-independent DNA recombination pathways. This family includes proteins related to RecT.	1.5765e-38
NZ_CP007773.1\|WP_043019634.1\|651679_652366_-\|hypothetical-protein	gnl\|CDD\|273893	TIGR01953, Transcription_elongation_protein_nusA., transcription termination factor NusA. This model describes NusA, or N utilization substance protein A, a bacterial transcription termination factor. It binds to RNA polymerase alpha subunit and promotes termination at certain RNA hairpin structures. It is named for the interaction in E. coli of phage lambda antitermination protein N with the N-utilization substance, consisting of NusA, NusB, NusE (ribosomal protein S10), and nusG. This model represents a region of NusA shared in all bacterial forms, and including an S1 (pfam00575) and a KH (pfam00013) RNA binding domains. Proteobacterial forms have an additional C-terminal region, not included in this model, with two repeats of 50-residue domain rich in acidic amino acids. [Transcription, Transcription factors].	0.00558289
NZ_CP007773.1\|WP_043019640.1\|659035_659995_+\|Dna2/Cas4-domain-containing-protein	gnl\|CDD\|273040	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4. This model represents a family of proteins associated with CRISPR repeats in a wide set of prokaryotic genomes. This scope of this model has been broadened since it was first built to describe an archaeal subset only. The function of the protein is undefined. Distantly related proteins, excluded from this model, include ORFs from Mycobacteriophage D29 and Sulfolobus islandicus filamentous virus and a region of the Schizosaccharomyces pombe DNA replication helicase Dna2p.	1.64685e-06
NZ_CP007773.1\|WP_043019635.1\|652658_653168_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	7.96737e-05
NZ_CP007773.1\|WP_043019636.1\|654434_654866_+\|hypothetical-protein	gnl\|CDD\|380640	cd19985, PBP1_ABC_HAAT-like, type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems predicted to be involved in uptake of hydrophobic amino acids or peptides. This subgroup includes the type 1 periplasmic ligand-binding domain of uncharacterized ABC (Atpase Binding Cassette)-type active transport systems that are predicted to be involved in the uptake of hydrophobic amino acids or peptides. This subgroup has high sequence similarity to members of the family of hydrophobic amino acid transporters (HAAT), such as leucine-isoleucine-valine binding protein (LIVBP); however, its ligand specificity has not been determined experimentally.	0.0020442

>NZ_CP007773.1|WP_043019635.1|652658_653168_+|helix-turn-helix-transcriptional-regulator
MRISASKRKIIKIMQEIEKKLEYHPIADLLEEYKIPRATYYTWRRRYIEYKNTCKVEDMVNMADGLNTKDTYLLTFETDDKEIGSRIRKIRESMNLSITQFISGSIYTQAQMTYYESGQRKINIHFLTLLFLKYGINPNYILLNQEPQFIFTGYKENIIKKNNFKKKFF
>NZ_CP007773.1|WP_043019634.1|651679_652366_-|hypothetical-protein
MSFLTFDSLKEVAIENNLDLFSTIESLKKAICQLYKDKEILIEINKNGEVLIEEVIRLKYDFFKKQLSINDKKLKKLKNNFIENIQKERNKIITNAIKNDKNIVYGEVFSIEKNIIKVNTKYGIGFCFKRNLYIKDLNMLKIKIGQKLYFHIHKYRKTKSGIELFLDRKHDSVILKESQEILKDCGVYNAKKIAGDKVLVYCMHKPNKAQIKKLAKITNEKIQIELRR
>NZ_CP007773.1|WP_043019633.1|650880_651678_-|hypothetical-protein
MNEKNIGGIGDFNSYGSGRFAHPNIKFDDIKKSNSASGRNIFNALSEIQRYHVIEERSEEIPKEYFTIEQIIDYFKIGFKSGFLESFIFAGLICFLQILYPSYKYYFLGKETTNMENILISISTYGPLIASTFFMAYISKYYKGLLTKRAIFSLMNGRSFTFILKGVGIFYLFMFLKSYSLENPSVIYSWTDWTLWLAQWFNPSINVEQLYVFYYRFVIPSLHDSAHYFLYSMIIFALLPYFTIFYKGFVRKKQKLEIEEEYEKY
>NZ_CP007773.1|WP_043019632.1|649510_650872_-|conjugative-transfer-system-protein-TraD
MSFFNKNKDTLNNKMFIGKGFSLDDKKREKLVDIYLEDDNCFNHSFVFGSTGVGKTRLIEGLIEQDIPKQNNIVIIDPKGDIGLFSKVTEIAKKHNREKDLLFLSPIYPDYSIKINPLKNYSMEEEIISHIVASVPAKDEFFYNIALETTTVIVKSLLIIRRYNKDESALNFDEVSSKASYNGLKDLRETLENIKDDTEEERELEKILETLTRVIESPADYFSKVSSTLRTTLTQMTTGNVGKIMGNTFDNVFINRLEKDEGVILYVMTGSLLTRQVSSIISKVTLSMIQSCVGRIYSSGRKFKHPLKIYIDEAASSLYRGIEVIYAQARGAKVAMMGLTQSTADIVEEIGQDAANKLLELTNTKIIMRLNDTKSAKVISDLGGKRKDFSYFLSLNGGINSREVEELNIEIDDVTNLQKREFYYFGFEGRFKGKTLRVKDGKLLIQMPDLTSK
>NZ_CP007773.1|WP_043019631.1|647355_649500_-|HD-domain-containing-protein
MLEIIENLMKFIYTHKKVREFIYYFIISIAGFLLFVFVLLNINIGVQKSNLSLLFNSQTYYYLFNIYQREIAIFLIIEQIILLSFIYYQNHKLNQHIKNSKKDELQVIHIKDLSKLWIEEESIILNDPLKQSLKRKYQPLAHTKNEDLLSIAHFKNDNIILFLEKSIKPYLNILESEELKAIVKLLHILEDNSKAPSVVPNKNDPNATYGFGHLKNIVEPLTLDGKTRFDIFYTISLLDHTLEVARNTIDTIESNKNFKKKDILAQAIISALAHDIGKIEKYKMQDKSKDFIALKEQPHHVISNIILYDSFKTLPNLDQIAKAVINHHSGAIAKEDVLLKLLVDCDKQTREKEIHSYLVKYNAFESNKAVTFRKNIFTQLQTLEEKNNYSLLIIKSKDEQLKSTAIKEFIQDESIINFSNEDNKLIMLIQEKSKNKIMANILTPIISFCTEEGIFIKTILINLQDIEYLDKTYMKNIIKELFDHIQNKETNFIHYADYKKIKHSKISISDNSTTEESKTHNEDKSSKSKEIITQIKDKLQTKTAQENQEKILQLKTDESAEEGFDIQNIEKLFLDKLKNKINTIEYYGTKNEINSISHKNFVLFKKSCLIKILGELIGGDSESLDRKVNFLIKYYKNHQDEDKRLVWFVNTDSGFYESLFYIYENGEKEVFSCIPFEAKLAFNLDSYELEKIKEKSDLKKYNIGKYRGEKNATK
>NZ_CP007773.1|WP_043019630.1|647057_647369_-|hypothetical-protein
MPQNKKTHLLNKRDSQIVILESKEAKILLDLAKKTDEIFTLIRKNAGNSINIDKANNTIKAWNDFLIETSCYIKEINKDLNIEYLEPISIVLLKEEMKTLKQI
>NZ_CP007773.1|WP_052243661.1|646845_647025_-|hypothetical-protein
MASEGLSDTRLSEITGIPLSTLNEWKKEKDRKFIYRIYKILKTSSESEIAKFFKPKKNQ
>NZ_CP007773.1|WP_043019629.1|646323_646824_-|hypothetical-protein
MLNILPQTTQDQEKIFLIDENLALCESGKILYYDDLGQLQDTDYECILDEINEHTSLKDIFNNIINLKDFVVNGYYLLNLIDFKIDNIDFSIQDDIVSFRDYKINLDSLEIQGKMIELDKDLSLVEELQNISAYDLDYIKAIVCAIYRKNITGFIEKEKLLKSFSS
>NZ_CP007773.1|WP_043019628.1|645762_646290_+|hypothetical-protein
MKLIKSLKNKIIFSQTSFDISMVLAIFSPIFIVPFLICLSDLEENSKSQIILAFVFICLYITFVLALCLKEEFEKSSYDFISKFNKTLEIELKYELEKINYSIDINAINFISFALIKCKNDYEKGKIDKDFINKTKEYYIKLFKKLIAEELKLQNKELILKSNQNEILKIMQDRH
>NZ_CP007773.1|WP_043019627.1|645151_645721_+|hypothetical-protein
MKKINAIIHILLTILFLIWFFNNEEFISRLKILILDFLAINNDENSFNPVINMVIMALVMLIIVIIFASYKFFDSLFSNNKEFIFYAPLLAIPIYCVFFGFIITIFFGGDETYALFNSDNGYVVERGNDIKVYYKGKLVNVANAIHFKSYKESFENGVFKIDFFDKEDKILMQVFCGENNERSCRVVGR
>NZ_CP007773.1|WP_043019636.1|654434_654866_+|hypothetical-protein
MSENIEKNQENTNTTYSYQERKAFIQNQKKQALEKNPQAIVFEASSYFGKNFHSIFQEIDATDSTIRRCWGYSIDDEEFKEWSDKLQQLQNTLNDVGQLGVKVLTKTSASEINFMPLRRKVVKAKNDIAMENSKAKQEKATKK
>NZ_CP007773.1|WP_043019637.1|655171_655627_+|single-stranded-DNA-binding-protein
MFNQIQVIGHLTKDVEMRYLPSGTAVAKSSIASNHKTRANDGSIHEETCFLDFSIFGRMAEIANQYLSKGSKVLVVGRLVQNNWTDSNGNNRTNYFIRVGEIKFLDPKQEPQEEVAQATQKQPEASKVAQTATKNTSSVNQIDDETEDLPF
>NZ_CP007773.1|WP_043019638.1|656071_656896_+|phage-recombination-protein-Bet
MSAITNTNQNTELNKERIALIKKHFFPVETKINKTEMDYCLSVATKYGLDPFLRQVFFVPRKAKVTKNGKDVWVEKIEPLVGRDGFLAIAHKSGKFGGIRSYSEIKNYPKLVNNQWQYTQDLVAICEVYRTDTNKPFIVEVAYSEYVQLTKDEKPTTFWASKPDTMLKKVAESQALRKAFNVSGLYSAEEMGVGITEDEIIIDTEAVQNTTIPDEENAISLEYLTNAVKALGLDIEIIGEYATVTGNTYNLTENLKQLGFKYKPDTKVWYQKIE
>NZ_CP007773.1|WP_052243662.1|657035_658016_+|DUF285-domain-containing-protein
MIKFLKKILSKKYYPKTKEELIDLINNEEICLSSIDTSSIVDMSHLFYYSKRKNFSGIEKWNVSNVEDMSFMFCGCKSFNQPLNNWNVSNVKNMYVMFKDCENFNQQLNNWNVSNVKNMYAMFCGCENFNQPLNNWNVSNVEDMSLMFDGCKLFNQPLNNWNVSNVKNMYAMFDGCKLFNQPLNNWNVSNVKSMKSMFCGCENFNQPLNNWNVSNVTNMKSMFDYCEKFNQPLNNWNVSNVKDMSFMFDYCENFNQPLNNWNVSNVEDMSFMFDYCENFNQPLNNWNVSSVKDMSFMFCGCKSFNQPLNNWNVSNVEDMCGIFKRL
>NZ_CP007773.1|WP_043019639.1|658178_658607_+|hypothetical-protein
MNTDKIFDYMADNASKWINKQLTNAKARSYDNKLVLEVDGYEFFLSDHEIHECGRLYEESLKIDSEKLQDLGFENFEIYDDYCAIIFEDYKMVLELTKEELKAMEFNYLIEDDTLFIYQNDESLEQAMQHYFSNNKNFKGNL
>NZ_CP007773.1|WP_167333021.1|658603_658750_+|hypothetical-protein
MRNVKKPLSIRIPLELKEELQKIADKEYRPLATQIVKILKDYVKKHNR
>NZ_CP007773.1|WP_043019640.1|659035_659995_+|Dna2/Cas4-domain-containing-protein
MEKNKFDSFVAQNLPKALKKATLESLGDRKEYIGSSDIAGCLRKAYLDKTNDVEHDLATLIRFQRGHIAEGIVEAMLDGLNPTKQLEKEIIHNDTPLKCHIDFALERKDEIVVIEAKSVSTSVENPYSSWLLQVSYQLEILSRHTNKKVRAYIVAINLNTGWFKSFEVDHNKSLAGIALNKARELTIALKEKVEPKCEEQLYCSTCPHKSNCPAMMKKSVQIDLNGDLLDVANRLIELNKLKKELDKELEEKKAIIEEYMRSTEAKKLNIGENFISLSNDTTSVSFDTKAFEKNEPELYANLFQKYQKSSSRKGYISIK
>NZ_CP007773.1|WP_043019641.1|660315_660705_+|hypothetical-protein
MSFITKSKTIKIANCYLVECYCGDYCNEKMRLGVFSSFEKALSFVKKSFINKKDEISYMQESNNTYLITNGNFQGKSIRSREFEKLSSLFVEPIEIRIVFDCKNFIQLSSKKFAEIGSSFYHDEIVSLN
>NZ_CP007773.1|WP_052243663.1|660806_661391_+|hypothetical-protein
MEKQLEKLIYNEEKIINLEGRILSISHSDWYDPFENDYAPNFFNLLRNYNVGSNFLDGYTSRDFESPEDIENYLDKKDYIWIKIGATIHSGVHLYPYSKKPADPWNGFDSGIAGYLYYKKETVREMFGVKRISSKLIDKVLENMNNFINDLEAYIEGDVYDLFIDGTHERTFVGFVDSYQEMQNCVNSFISCKL
>NZ_CP007773.1|WP_043019642.1|661494_661713_+|hypothetical-protein
MKIISSKHFAERLQNRKIDLSIISKIYEEIAKSPINQDLFKLVSNNTTIIFQLDREKGEIRLITGYPCNKRN

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007773_1	1.2\|643198\|29\|NZ_CP007773\|CRISPRCasFinder	643198-643226	29	NZ_CP013716	Staphylococcus equorum strain C2014 plasmid pC2014-2, complete sequence	15099-15127	7	0.759
NZ_CP007773_1	1.2\|643198\|29\|NZ_CP007773\|CRISPRCasFinder	643198-643226	29	NZ_CP013716	Staphylococcus equorum strain C2014 plasmid pC2014-2, complete sequence	47334-47362	7	0.759

1. spacer 1.2|643198|29|NZ_CP007773|CRISPRCasFinder matches to NZ_CP013716 (Staphylococcus equorum strain C2014 plasmid pC2014-2, complete sequence) position: , mismatch: 7, identity: 0.759

gaactttaaagtcctttatatatccccaa	CRISPR spacer
gttaataaaagttctttatatatccccat	Protospacer
*    * *****.***************

2. spacer 1.2|643198|29|NZ_CP007773|CRISPRCasFinder matches to NZ_CP013716 (Staphylococcus equorum strain C2014 plasmid pC2014-2, complete sequence) position: , mismatch: 7, identity: 0.759

gaactttaaagtcctttatatatccccaa	CRISPR spacer
gttaataaaagttctttatatatccccat	Protospacer
*    * *****.***************

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

282118 : 291189

Synechococcus_phage(77.78%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043019409.1\|282118_282514_+	HAD hydrolase family protein	M4QRS4	Synechococcus_phage	1.6e-12	46.0
WP_043019410.1\|282510_284049_+	capsular polysaccharide biosynthesis protein	B2ZYD9	Ralstonia_phage	1.8e-38	26.7
WP_039662814.1\|284045_284777_+	glycosyl transferase family 2	A0A222YY90	Synechococcus_phage	4.8e-18	28.5
WP_043019411.1\|284757_285390_+	hypothetical protein	A0A2H4UUJ1	Bodo_saltans_virus	4.3e-15	32.6
WP_043020334.1\|285413_286016_+	HAD family phosphatase	A0A1D8KNV9	Synechococcus_phage	1.5e-33	40.2
WP_039662821.1\|286016_286757_+	NTP transferase domain-containing protein	A0A1D8KNV9	Synechococcus_phage	9.4e-30	33.0
WP_043019412.1\|286737_287073_+	nuclear transport factor 2 family protein	NA	NA	NA	NA
WP_039662825.1\|287075_287408_+	hypothetical protein	NA	NA	NA	NA
WP_039664756.1\|287403_288138_+	glycosyl transferase family 2	A0A1D8KNV9	Synechococcus_phage	2.7e-53	48.5
WP_039662827.1\|288124_289252_+	class I SAM-dependent methyltransferase	M4QRS6	Synechococcus_phage	2.1e-60	39.3
WP_039662829.1\|289245_291189_+	hypothetical protein	E3SJ94	Synechococcus_phage	9.2e-08	26.4

DBSCAN-SWA_2

529768 : 540043

environmental_Halophage(16.67%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_043019538.1\|529768_531130_+	uracil-xanthine permease	H9YQ34	environmental_Halophage	1.6e-38	65.9
WP_043019539.1\|531148_531952_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	1.3e-45	41.4
WP_043019540.1\|531963_532434_+	6,7-dimethyl-8-ribityllumazine synthase	A0A2H4PQS3	Staphylococcus_phage	9.2e-31	45.4
WP_043019541.1\|532435_532834_+	transcription antitermination factor NusB	NA	NA	NA	NA
WP_043019542.1\|532830_533514_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA
WP_043019543.1\|533526_533937_-	META domain-containing protein	NA	NA	NA	NA
WP_043019544.1\|533954_535547_-	MCP-domain signal transduction protein	A0A2H4J162	uncultured_Caudovirales_phage	4.1e-06	50.0
WP_039663219.1\|535562_537095_-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	E3SNU8	Prochlorococcus_phage	2.1e-39	46.0
WP_043019545.1\|537095_537863_-	Dna-J like membrane chaperone protein	NA	NA	NA	NA
WP_043019546.1\|537865_540043_-	phosphoribosylformylglycinamidine synthase subunit PurL	A6N228	Microbacterium_phage	3.2e-142	40.6

DBSCAN-SWA_3

934386 : 981959

Campylobacter_phage(57.14%)

terminase,integrase,plate,tail,transposase

attL 923294:923349|attR 982191:982246

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
923294:923349	attL	NA	NA	NA	NA
WP_039663861.1\|934386_935016_+	hypothetical protein	A7YG70	Campylobacter_phage	3.5e-49	78.8
WP_043019801.1\|935073_935394_+	hypothetical protein	A7YG71	Campylobacter_phage	2.2e-44	85.8
WP_039664819.1\|935410_935605_+	hypothetical protein	A7YG72	Campylobacter_phage	1.8e-17	71.4
WP_043019802.1\|935670_935958_+	ankyrin repeat domain-containing protein	A7YGI8	Campylobacter_phage	6.9e-37	77.9
WP_039663867.1\|935989_936802_-	DNA adenine methylase	A7YGG5	Campylobacter_phage	5.9e-134	88.5
WP_043019803.1\|936904_937387_-	virion morphogenesis protein	A7YG96	Campylobacter_phage	4.1e-66	77.6
WP_043019804.1\|937390_939592_-\|tail	phage tail tape measure protein	A7YG97	Campylobacter_phage	1.0e-249	70.2
WP_043019805.1\|939633_939939_+	hypothetical protein	A7YG88	Campylobacter_phage	8.4e-17	88.7
WP_039663876.1\|940050_940290_-	Mu-like prophage protein gp41	A7YGZ3	Campylobacter_phage	2.0e-21	84.4
WP_039663878.1\|940331_940841_-\|tail	phage contractile tail tube protein, P2 family	A7YG76	Campylobacter_phage	2.0e-79	86.4
WP_043019806.1\|940843_942034_-\|tail	phage tail sheath family protein	A7YGY2	Campylobacter_phage	2.9e-166	72.7
WP_043019807.1\|942033_943296_-	hypothetical protein	X2KLT6	Campylobacter_phage	7.0e-41	37.0
WP_043019808.1\|943306_943663_-	DUF1353 domain-containing protein	A7YGF6	Campylobacter_phage	8.8e-42	64.1
WP_043019809.1\|943662_944175_-	DUF4376 domain-containing protein	A7YGY7	Campylobacter_phage	2.8e-41	54.4
WP_039663893.1\|945227_945848_-\|tail	phage tail protein	A7YH02	Campylobacter_phage	2.1e-51	86.4
WP_043019810.1\|945844_947002_-\|plate	baseplate assembly protein	Q8H9N3	Vibrio_phage	3.3e-13	23.5
WP_043019811.1\|946998_947289_-\|plate	baseplate assembly protein W	Q8H9N4	Vibrio_phage	3.6e-09	46.9
WP_039663900.1\|947285_947498_-	hypothetical protein	NA	NA	NA	NA
WP_039663902.1\|947497_947995_-\|plate	phage baseplate assembly protein V	V5YUM9	Pseudomonas_phage	1.6e-09	35.8
WP_039663905.1\|947991_948306_-	hypothetical protein	NA	NA	NA	NA
WP_043019812.1\|948385_948634_-	hypothetical protein	NA	NA	NA	NA
WP_043019813.1\|948630_948966_-	hypothetical protein	NA	NA	NA	NA
WP_043019814.1\|948975_949365_-	peptidase, M15 family	A0A2I7QT07	Vibrio_phage	4.8e-17	39.8
WP_043019815.1\|949514_949949_+	hypothetical protein	NA	NA	NA	NA
WP_043019816.1\|949950_950772_+	Mu-like prophage protein	A0A2H4JAW3	uncultured_Caudovirales_phage	1.7e-24	48.4
WP_043019817.1\|950774_951287_+	hypothetical protein	NA	NA	NA	NA
WP_043019818.1\|951289_952267_+	hypothetical protein	R9TRN2	Rhizobium_phage	5.6e-06	22.8
WP_043019819.1\|952382_952841_+	DUF1320 family protein	NA	NA	NA	NA
WP_039663924.1\|952833_953316_+	DUF1804 family protein	NA	NA	NA	NA
WP_043019820.1\|953315_954986_+\|terminase	phage terminase large subunit	A0A0A1IW02	Pseudomonas_phage	5.2e-92	41.4
WP_043019821.1\|954995_956354_+	Mu-like prophage protein gp29	A0A2H4JHL1	uncultured_Caudovirales_phage	7.6e-17	26.2
WP_043019822.1\|956355_957594_+	phage Mu protein F-like protein	A0A0M4UTA3	Ralstonia_phage	3.1e-17	28.0
WP_039663934.1\|957729_958104_+	phage protein U	NA	NA	NA	NA
WP_039663936.1\|958096_958288_+\|tail	phage tail protein X	NA	NA	NA	NA
WP_043019823.1\|958281_959259_+\|tail	phage tail protein D	A0A1B2LRT8	Wolbachia_phage	2.1e-08	23.2
WP_043019824.1\|959241_960090_-	hypothetical protein	NA	NA	NA	NA
WP_043019825.1\|960061_960265_-	CJH_07325 family protein	J9SI91	Campylobacter_phage	1.2e-06	44.3
WP_043019826.1\|960377_960662_-	Mor transcription activator domain protein	NA	NA	NA	NA
WP_043019828.1\|961562_962036_-	hypothetical protein	NA	NA	NA	NA
WP_043019829.1\|962093_962339_-	hypothetical protein	NA	NA	NA	NA
WP_039663960.1\|962353_962620_-	hypothetical protein	NA	NA	NA	NA
WP_043019830.1\|962673_962874_-	hypothetical protein	NA	NA	NA	NA
WP_039663961.1\|962870_963356_-	host-nuclease inhibitor protein Gam	NA	NA	NA	NA
WP_039663964.1\|963464_963803_-	hypothetical protein	NA	NA	NA	NA
WP_043019831.1\|963858_964044_-	hypothetical protein	NA	NA	NA	NA
WP_043019832.1\|964040_964232_-	hypothetical protein	NA	NA	NA	NA
WP_043019833.1\|964234_965158_-	AAA domain protein	NA	NA	NA	NA
WP_043019834.1\|965239_967300_-\|integrase,transposase	DDE-type integrase/transposase/recombinase	NA	NA	NA	NA
WP_039663976.1\|967301_967502_-	Mu phage-associated protein	NA	NA	NA	NA
WP_039663978.1\|967646_968279_+	LexA family transcriptional regulator	M5A9D2	Nitratiruptor_phage	1.1e-23	45.2
WP_039663980.1\|968301_968895_-	hypothetical protein	NA	NA	NA	NA
WP_043019836.1\|973536_974679_+	ATP-binding protein	NA	NA	NA	NA
WP_167333046.1\|974675_975272_+	hypothetical protein	NA	NA	NA	NA
WP_167333026.1\|975419_975563_-	hypothetical protein	NA	NA	NA	NA
WP_069107230.1\|976716_977175_+	hypothetical protein	NA	NA	NA	NA
WP_158336971.1\|977250_977418_-	hypothetical protein	NA	NA	NA	NA
WP_043019838.1\|977625_977961_-	hypothetical protein	NA	NA	NA	NA
WP_002789000.1\|978053_978323_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_043019839.1\|978312_978534_-	hypothetical protein	NA	NA	NA	NA
WP_043019840.1\|978772_979465_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_043019841.1\|979581_980505_+	AAA domain protein	NA	NA	NA	NA
WP_167333027.1\|980504_980783_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_043019842.1\|980828_981959_-\|integrase	site-specific integrase	A0A2H4JCB7	uncultured_Caudovirales_phage	3.4e-15	24.3
982191:982246	attR	NA	NA	NA	NA

DBSCAN-SWA_4

1191585 : 1200858

Salmonella_phage(33.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039664162.1\|1191585_1193964_+	endopeptidase La	A0A0R6PGP8	Moraxella_phage	2.9e-128	36.0
WP_039664163.1\|1193975_1195355_-	MCP-domain energy taxis signal transduction protein	A0A2H4J162	uncultured_Caudovirales_phage	3.8e-16	41.5
WP_039664164.1\|1195366_1195858_-	PAS sensor protein	A0A1B0V854	Salmonella_phage	1.6e-17	38.8
WP_039664165.1\|1195945_1196437_-	PAS sensor protein	A0A1B0V854	Salmonella_phage	3.4e-20	41.5
WP_039664166.1\|1196480_1197692_-	threonine ammonia-lyase	A0A1W6JHY1	Lactococcus_phage	4.4e-08	24.9
WP_052243718.1\|1197694_1198054_-	CoA-binding protein	NA	NA	NA	NA
WP_158336973.1\|1198258_1198423_-	hypothetical protein	NA	NA	NA	NA
WP_043019940.1\|1199805_1200858_-\|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	A0A2P1ELP3	Moumouvirus	3.9e-13	29.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP007773

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection