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Overview of predicted results

Overview of the results

Contig_ID Contig_def CRISPR array number Contig Signature genes Self targeting spacer number Target MGE spacer number Prophage number Anti-CRISPR protein number
NZ_CP007776 Campylobacter lari CCUG 22395 chromosome, complete genome 2 crisprs cas2,csa3,RT,DEDDh 0 2 1 0

Results visualization

1. NZ_CP007776
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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007776_1 211306-211474 orTypeII NA
2 spacers
cas2,cas9

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CRISPR_ID CRISPR_location CRISPR_type Repeat_type Spacer_info Cas_protein_info CRISPR-Cas_info
NZ_CP007776_2 577185-577279 Orphan NA
1 spacers

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CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_ID Protospacer_location Mismatch Identity
CRISPR_ID Spacer_Info Spacer_region Spacer_length Hit_phage_ID Hit_phage_def Protospacer_location Mismatch Identity
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 AP013491 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C37-MedDCM-OCT-S26-C78 30025-30053 5 0.828
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 AP013492 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C37-MedDCM-OCT-S29-C71 29804-29832 5 0.828
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 AP013493 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C37-MedDCM-OCT-S32-C82 6345-6373 5 0.828
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 AP013494 Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C37-MedDCM-OCT-S44-C73 25772-25800 5 0.828
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 NZ_MN602039 Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence 24976-25004 6 0.793
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 NC_019752 Calothrix sp. PCC 6303 plasmid pCAL6303.03, complete sequence 53861-53889 6 0.793
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 MH319722 Marine virus AG-345-D19 Ga0172267_103 genomic sequence 2328-2356 7 0.759
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 NC_014824 Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence 7597-7625 7 0.759
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 MK250028 Prevotella phage Lak-B9, complete genome 151015-151043 7 0.759
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 MK250025 Prevotella phage Lak-B6, complete genome 150074-150102 7 0.759
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 MK250022 Prevotella phage Lak-B3, complete genome 150089-150117 7 0.759
NZ_CP007776_1 1.1|211343|29|NZ_CP007776|CRISPRCasFinder 211343-211371 29 MK250020 Prevotella phage Lak-B1, complete genome 150995-151023 7 0.759
NZ_CP007776_1 1.2|211409|29|NZ_CP007776|CRISPRCasFinder 211409-211437 29 NZ_AP017565 Pseudanabaena sp. ABRG5-3 plasmid ABRG53e, complete sequence 24588-24616 7 0.759

1. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to AP013491 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C37-MedDCM-OCT-S26-C78) position: , mismatch: 5, identity: 0.828

gaagttctttatctacaagttcttctgca	CRISPR spacer
taggttctttatctccaagttctactgta	Protospacer
 *.*********** ******** ***.*

2. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to AP013492 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C37-MedDCM-OCT-S29-C71) position: , mismatch: 5, identity: 0.828

gaagttctttatctacaagttcttctgca	CRISPR spacer
taggttctttatctccaagttctactgta	Protospacer
 *.*********** ******** ***.*

3. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to AP013493 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C37-MedDCM-OCT-S32-C82) position: , mismatch: 5, identity: 0.828

gaagttctttatctacaagttcttctgca	CRISPR spacer
taggttctttatctccaagttctactgta	Protospacer
 *.*********** ******** ***.*

4. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to AP013494 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G19, isolate: uvMED-CGR-C37-MedDCM-OCT-S44-C73) position: , mismatch: 5, identity: 0.828

gaagttctttatctacaagttcttctgca	CRISPR spacer
taggttctttatctccaagttctactgta	Protospacer
 *.*********** ******** ***.*

5. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to NZ_MN602039 (Staphylococcus capitis strain APC2923 plasmid pJOS_01, complete sequence) position: , mismatch: 6, identity: 0.793

gaagttctttatctacaagttcttctgca	CRISPR spacer
ttagttctttttctataagttcttctaaa	Protospacer
  ******** ****.**********. *

6. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to NC_019752 (Calothrix sp. PCC 6303 plasmid pCAL6303.03, complete sequence) position: , mismatch: 6, identity: 0.793

gaagttctttatctacaagttcttctgca	CRISPR spacer
gcatttctttatctataagtttttctggt	Protospacer
* * ***********.*****.*****  

7. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to MH319722 (Marine virus AG-345-D19 Ga0172267_103 genomic sequence) position: , mismatch: 7, identity: 0.759

gaagttctttatctacaagttcttctgca	CRISPR spacer
aacattctttatctacaagtacttctaac	Protospacer
.* .**************** *****.  

8. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to NC_014824 (Ruminococcus albus 7 = DSM 20455 plasmid pRUMAL01, complete sequence) position: , mismatch: 7, identity: 0.759

gaagttctttatctacaagttcttctgca	CRISPR spacer
taagttctttagctgcaagttcttttctt	Protospacer
 ********** **.*********.* . 

9. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 7, identity: 0.759

gaagttctttatctacaagttcttctgca	CRISPR spacer
catcttctttatctccaatttcttctggt	Protospacer
 *  ********** *** ********  

10. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 7, identity: 0.759

gaagttctttatctacaagttcttctgca	CRISPR spacer
catcttctttatctccaatttcttctggt	Protospacer
 *  ********** *** ********  

11. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 7, identity: 0.759

gaagttctttatctacaagttcttctgca	CRISPR spacer
catcttctttatctccaatttcttctggt	Protospacer
 *  ********** *** ********  

12. spacer 1.1|211343|29|NZ_CP007776|CRISPRCasFinder matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 7, identity: 0.759

gaagttctttatctacaagttcttctgca	CRISPR spacer
catcttctttatctccaatttcttctggt	Protospacer
 *  ********** *** ********  

13. spacer 1.2|211409|29|NZ_CP007776|CRISPRCasFinder matches to NZ_AP017565 (Pseudanabaena sp. ABRG5-3 plasmid ABRG53e, complete sequence) position: , mismatch: 7, identity: 0.759

ctaatgtaagtaaggcaaaagagtttgta	CRISPR spacer
tacctgtaagtaatgcagaagagtttgga	Protospacer
.   ********* ***.********* *

Region Region Position Protein_number Hit_taxonomy Key_proteins Att_site Prophage annotation
DBSCAN-SWA_1 513309 : 523578 10 environmental_Halophage(16.67%) NA NA
Acr ID Acr position Acr size Homology with known anti Neighbor HTH/AcRanker Neighbor Aca In prophage Protospacer in prophage