CRISPRimmunity

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007767	Campylobacter peloridis LMG 23910 plasmid pPEL1, complete sequence	0 crisprs	NA	0	0	0	0
NZ_CP007766	Campylobacter peloridis LMG 23910 chromosome, complete genome	4 crisprs	cas9,cas1,cas2,WYL,csa3,DEDDh	0	10	1	0
NZ_CP007768	Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence	1 crisprs	NA	0	3	0	0

1. NZ_CP007768

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007768_1

• CRISPR_ID: NZ_CP007768_1
• CRISPR_location: 1-231
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 3 spacers

Consensus repeat of NZ_CP007768_1

Consensus_repeat	Method
TATTAAAACGGGGAATTGGGAGTATTAA	CRISPRCasFinder

spacers of NZ_CP007768_1

>1.1|29|38|NZ_CP007768|CRISPRCasFinder
AAGGGCAAATTGGGAGTATTAAAACGGGGAATTGGGAG
>1.2|95|28|NZ_CP007768|CRISPRCasFinder
CGATAAAGATTTTTTTTATCGGCTTAAA
>1.3|151|53|NZ_CP007768|CRISPRCasFinder
GGCAACAAATTAGGAAAGCACATCAAAACACCATATAACGATAGCTAGCGAAC

CRISPR arrays and Neighbor proteins around NZ_CP007768_1

CRISPR arrays

The CRISPR arrays of NZ_CP007768_1

>merge|NZ_CP007768|1|1-231|CRISPRCasFinder
TATTAAAACGGGGAATTGGGAGTATTAAAAGGGCAAATTGGGAGTATTAAAACGGGGAATTGGGAGTATTAAAACGGGGAATTGGGAAACACGCCGATAAAGATTTTTTTTATCGGCTTAAATATTAAAACGGGGAATTGGGAGTATTAAGGCAACAAATTAGGAAAGCACATCAAAACACCATATAACGATAGCTAGCGAACTATTAAGTGGGTAAATTGGGAGTATTAA

>NZ_CP007768|1|1|1-231|CRISPRCasFinder
TATTAAAACGGGGAATTGGGAGTATTAA	AAGGGCAAATTGGGAGTATTAAAACGGGGAATTGGGAG
TATTAAAACGGGGAATTGGGAAACACGC	CGATAAAGATTTTTTTTATCGGCTTAAA
TATTAAAACGGGGAATTGGGAGTATTAA	GGCAACAAATTAGGAAAGCACATCAAAACACCATATAACGATAGCTAGCGAAC
TATTAAGTGGGTAAATTGGGAGTATTAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007768.1|WP_044599646.1|1750_1951_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP007768.1|WP_044599645.1|503_1559_+|plasmid-replication-protein-B	unknown	unknown	gnl|CDD|376444

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP007768.1|WP_044599645.1|503_1559_+|plasmid-replication-protein-B	gnl|CDD|376444	pfam01051, Rep_3, Initiator Replication protein. This protein is an initiator of plasmid replication. RepB possesses nicking-closing (topoisomerase I) like activity. It is also able to perform a strand transfer reaction on ssDNA that contains its target. This family also includes RepA which is an E.coli protein involved in plasmid replication. The RepA protein binds to DNA repeats that flank the repA gene.	4.3128e-36

Protein sequences

>NZ_CP007768.1|WP_044599645.1|503_1559_+|plasmid-replication-protein-B
MSEIVKYHNDFNKIKLPSFTEQEQNLLCFLLKKIKEKQKDEVIKIYPKDLMGFSEKNLSNREITEILNSFEEKFFKADFTIIVKDEVRNLIGKMRVNLFNNFVIWKKTCTDWDMEIGDGLFWQEFTCIDIEINKHFEYLVNQLTANFTSFELAEFIALSGKYTKTLYRLLKQYRTTGKAYFEWEEFKRIMDISEKMRMCDIDKDIIKPAIKELTKERTLFDQVRVPFKNLAFEKKKIKARGRGGKVVGIEFTFKPENIAIQKIENEAIENASDEEKILMTCNNLCQSKIRFKYEDKIYQSNSFDFYNFIFNAVELQEDKDGNLIPYEIRVFRCKNEEDFFKLIKLFTSNIY
>NZ_CP007768.1|WP_044599646.1|1750_1951_+|hypothetical-protein
METNKTEINIKEERKLISEMNKIYTDITKLESQIKFLCLKLESKQKRLNEIKEKFASSVAQNGTNI

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007768_1	1.1|29|38|NZ_CP007768|CRISPRCasFinder	29-66	38	NZ_CP007768	Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence	29-66	0	1.0
NZ_CP007768_1	1.2|95|28|NZ_CP007768|CRISPRCasFinder	95-122	28	NZ_CP007768	Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence	95-122	0	1.0
NZ_CP007768_1	1.3|151|53|NZ_CP007768|CRISPRCasFinder	151-203	53	NZ_CP007768	Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence	151-203	0	1.0
NZ_CP007768_1	1.2|95|28|NZ_CP007768|CRISPRCasFinder	95-122	28	NC_007962	Campylobacter lari plasmid pUPTC237 DNA, complete sequence	1112-1139	3	0.893
NZ_CP007768_1	1.2|95|28|NZ_CP007768|CRISPRCasFinder	95-122	28	MG543995	Staphylococcus phage UPMK_1, partial genome	89060-89087	7	0.75

1. spacer 1.1|29|38|NZ_CP007768|CRISPRCasFinder matches to NZ_CP007768 (Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence) position: , mismatch: 0, identity: 1.0

aagggcaaattgggagtattaaaacggggaattgggag	CRISPR spacer
aagggcaaattgggagtattaaaacggggaattgggag	Protospacer
**************************************

2. spacer 1.2|95|28|NZ_CP007768|CRISPRCasFinder matches to NZ_CP007768 (Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence) position: , mismatch: 0, identity: 1.0

cgataaagattttttttatcggcttaaa	CRISPR spacer
cgataaagattttttttatcggcttaaa	Protospacer
****************************

3. spacer 1.3|151|53|NZ_CP007768|CRISPRCasFinder matches to NZ_CP007768 (Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence) position: , mismatch: 0, identity: 1.0

ggcaacaaattaggaaagcacatcaaaacaccatataacgatagctagcgaac	CRISPR spacer
ggcaacaaattaggaaagcacatcaaaacaccatataacgatagctagcgaac	Protospacer
*****************************************************

4. spacer 1.2|95|28|NZ_CP007768|CRISPRCasFinder matches to NC_007962 (Campylobacter lari plasmid pUPTC237 DNA, complete sequence) position: , mismatch: 3, identity: 0.893

cgataaagattttttttatcggcttaaa	CRISPR spacer
cggtaaagattttttttaccggcttaat	Protospacer
**.***************.******** 

5. spacer 1.2|95|28|NZ_CP007768|CRISPRCasFinder matches to MG543995 (Staphylococcus phage UPMK_1, partial genome) position: , mismatch: 7, identity: 0.75

cgataaagattttttttatcggcttaaa	CRISPR spacer
tattaaagaatttttttatcggattatc	Protospacer
.. ****** ************ ***  

2. NZ_CP007766

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007766_1

• CRISPR_ID: NZ_CP007766_1
• CRISPR_location: 227906-228670
• CRISPR_type: TypeII
• Repeat_type: NA
• Spacer_info: 11 spacers
• Cas_protein_info: cas2,cas1,cas9

Consensus repeat of NZ_CP007766_1

Consensus_repeat	Method
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	PILER-CR
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	CRISPRCasFinder
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	CRT

spacers of NZ_CP007766_1

>1.1|227942|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
TAATCGTTTGCCTCTATTTTTTCCAAAGGAA
>1.2|228009|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
TGGATATGCTCCATCATCCCCATTTTTTTT
>1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
TGAAAGTAAATTCAATACCTACAACTTTTCC
>1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
AGATATGTTAATTAGCAAAAACAACTTAAA
>1.5|228208|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
TGCCTTATCGTTTGTTATGGGACGATTTTGA
>1.6|228275|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
AAAACGCCTTTTGCACTAACTTTAACTTCA
>1.7|228341|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
TAAGCAAGTTTTTCAGCTAACTCTGCAATA
>1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
TTTCAACTTCTTTAAAAGCTTATGATTATC
>1.9|228473|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
ATAATCACACGCCTTACACAAACTGATTTA
>1.10|228539|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT
CTTTGATAAGCTTTGCAGTTTGATTTGGCT
>1.11|228605|30|NZ_CP007766|CRISPRCasFinder,CRT
ATATGTGCTGTAGCTTCCAAAGTTTCTTTA

CRISPR arrays and Neighbor proteins around NZ_CP007766_1

CRISPR arrays

The CRISPR arrays of NZ_CP007766_1

>merge|NZ_CP007766|1|227906-228670|PILER-CR,CRISPRCasFinder,CRT
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACTAATCGTTTGCCTCTATTTTTTCCAAAGGAAATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACTGGATATGCTCCATCATCCCCATTTTTTTTATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACTGAAAGTAAATTCAATACCTACAACTTTTCCATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACAGATATGTTAATTAGCAAAAACAACTTAAAATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACTGCCTTATCGTTTGTTATGGGACGATTTTGAATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACAAAACGCCTTTTGCACTAACTTTAACTTCAATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACTAAGCAAGTTTTTCAGCTAACTCTGCAATAATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACTTTCAACTTCTTTAAAAGCTTATGATTATCATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACATAATCACACGCCTTACACAAACTGATTTAATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACCTTTGATAAGCTTTGCAGTTTGATTTGGCTATTTTACCATAAAGAAATTTAAAAAGAGACTAAAACATATGTGCTGTAGCTTCCAAAGTTTCTTTAATTTTACCATAAAGAAATTTAAAAAGAGACTCTATT

>NZ_CP007766|1|1|227906-228604|PILER-CR
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TAATCGTTTGCCTCTATTTTTTCCAAAGGAA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGGATATGCTCCATCATCCCCATTTTTTTT
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGAAAGTAAATTCAATACCTACAACTTTTCC
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	AGATATGTTAATTAGCAAAAACAACTTAAA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGCCTTATCGTTTGTTATGGGACGATTTTGA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	AAAACGCCTTTTGCACTAACTTTAACTTCA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TAAGCAAGTTTTTCAGCTAACTCTGCAATA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TTTCAACTTCTTTAAAAGCTTATGATTATC
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	ATAATCACACGCCTTACACAAACTGATTTA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	CTTTGATAAGCTTTGCAGTTTGATTTGGCT
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC

>NZ_CP007766|1|1|227906-228670|CRISPRCasFinder
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TAATCGTTTGCCTCTATTTTTTCCAAAGGAA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGGATATGCTCCATCATCCCCATTTTTTTT
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGAAAGTAAATTCAATACCTACAACTTTTCC
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	AGATATGTTAATTAGCAAAAACAACTTAAA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGCCTTATCGTTTGTTATGGGACGATTTTGA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	AAAACGCCTTTTGCACTAACTTTAACTTCA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TAAGCAAGTTTTTCAGCTAACTCTGCAATA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TTTCAACTTCTTTAAAAGCTTATGATTATC
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	ATAATCACACGCCTTACACAAACTGATTTA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	CTTTGATAAGCTTTGCAGTTTGATTTGGCT
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	ATATGTGCTGTAGCTTCCAAAGTTTCTTTA
ATTTTACCATAAAGAAATTTAAAAAGAGACTCTATT

>NZ_CP007766|1|1|227906-228670|CRT
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TAATCGTTTGCCTCTATTTTTTCCAAAGGAA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGGATATGCTCCATCATCCCCATTTTTTTT
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGAAAGTAAATTCAATACCTACAACTTTTCC
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	AGATATGTTAATTAGCAAAAACAACTTAAA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TGCCTTATCGTTTGTTATGGGACGATTTTGA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	AAAACGCCTTTTGCACTAACTTTAACTTCA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TAAGCAAGTTTTTCAGCTAACTCTGCAATA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	TTTCAACTTCTTTAAAAGCTTATGATTATC
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	ATAATCACACGCCTTACACAAACTGATTTA
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	CTTTGATAAGCTTTGCAGTTTGATTTGGCT
ATTTTACCATAAAGAAATTTAAAAAGAGACTAAAAC	ATATGTGCTGTAGCTTCCAAAGTTTCTTTA
ATTTTACCATAAAGAAATTTAAAAAGAGACTCTATT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007766.1|WP_044598261.1|218299_218659_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP007766.1|WP_044598273.1|230369_231245_-|receiver-domain-protein	unknown	unknown	gnl|CDD|223855
NZ_CP007766.1|WP_044598271.1|228730_229222_-|phosphatidylglycerophosphatase-A	unknown	unknown	gnl|CDD|368021
NZ_CP007766.1|WP_044598269.1|226448_227348_+|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|274694
NZ_CP007766.1|WP_044598278.1|235508_236732_-|glucose-6-phosphate-isomerase	unknown	unknown	gnl|CDD|235168
NZ_CP007766.1|WP_044598280.1|237627_238209_+|YigZ-family-protein	unknown	unknown	gnl|CDD|376491
NZ_CP007766.1|WP_044598276.1|233580_234744_+|2,3,4,5-tetrahydropyridine-2-carboxylate-N-succinyltransferase	unknown	unknown	gnl|CDD|225082
NZ_CP007766.1|WP_044598264.1|220414_221257_+|flagellar-motor-switch-protein-FliY	unknown	unknown	gnl|CDD|236264
NZ_CP007766.1|WP_044598272.1|229225_230392_-|ATP-sulfurylase-(sulfate-adenylyltransferase)	unknown	unknown	gnl|CDD|224957
NZ_CP007766.1|WP_044598270.1|227334_227760_+|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226043
NZ_CP007766.1|WP_044598262.1|218645_219332_+|RNA-polymerase-sigma-factor-FliA	unknown	unknown	gnl|CDD|235901
NZ_CP007766.1|WP_044598267.1|223113_223365_-|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl|CDD|238045
NZ_CP007766.1|WP_044598268.1|223471_226459_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	gnl|CDD|226044
NZ_CP007766.1|WP_044598265.1|221253_221889_+|TIGR00730-family-Rossman-fold-protein	unknown	unknown	gnl|CDD|224527
NZ_CP007766.1|WP_044598277.1|234929_235379_-|DNA-binding-ferritin-like-protein	unknown	unknown	gnl|CDD|223854
NZ_CP007766.1|WP_044598275.1|232466_233570_+|Mrp/NBP35-family-ATP-binding-protein	unknown	unknown	gnl|CDD|378455
NZ_CP007766.1|WP_044598263.1|219333_220425_+|flagellar-motor-switch-protein-FliM	unknown	unknown	gnl|CDD|235849
NZ_CP007766.1|WP_044598266.1|221851_222868_+|tRNA-2-thiouridine(34)-synthase-MnmA	unknown	unknown	gnl|CDD|234664
NZ_CP007766.1|WP_044598274.1|231241_232357_-|bifunctional-2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase/2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	unknown	unknown	gnl|CDD|236492
NZ_CP007766.1|WP_044598279.1|236725_237553_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU	unknown	unknown	gnl|CDD|273443

HMMScan for Signature genes

Protein	Cas_name	Cas_description	E-value	Identity	Coverage
NZ_CP007766.1|WP_044598270.1|227334_227760_+|CRISPR-associated-endonuclease-Cas2	cas2	COG3512_cas2_CAS-II-A:CAS-II-B:CAS-II-C	1.5e-49	161.7	2.8
NZ_CP007766.1|WP_044598269.1|226448_227348_+|type-II-CRISPR-associated-endonuclease-Cas1	cas1	cd09720_cas1_CAS-II-A:CAS-II-B:CAS-II-C	1.6e-95	314.1	10.9
NZ_CP007766.1|WP_044598268.1|223471_226459_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9	cas9	COG3513_cas9_CAS-II-A:CAS-II-B:CAS-II-C	1.3e-241	799.5	72.4

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP007766.1|WP_044598273.1|230369_231245_-|receiver-domain-protein	gnl|CDD|223855	COG0784, CheY, FOG: CheY-like receiver [Signal transduction mechanisms].	2.45368e-12
NZ_CP007766.1|WP_044598271.1|228730_229222_-|phosphatidylglycerophosphatase-A	gnl|CDD|368021	pfam04608, PgpA, Phosphatidylglycerophosphatase A. This family represents a family of bacterial phosphatidylglycerophosphatases (EC:3.1.3.27), known as PgpA. It appears that bacteria possess several phosphatidylglycerophosphatases, and thus, PgpA is not essential in Escherichia coli.	2.84095e-48
NZ_CP007766.1|WP_044598269.1|226448_227348_+|type-II-CRISPR-associated-endonuclease-Cas1	gnl|CDD|274694	TIGR03639, cas1_NMENI, CRISPR-associated endonuclease Cas1, subtype II/NMENI. The CRISPR-associated protein Cas1 is virtually universal to CRISPR systems. CRISPR, an acronym for Clustered Regularly Interspaced Short Palindromic Repeats, is a prokaryotic immunity system for foreign DNA, mostly from phage. CRISPR systems belong to different subtypes, distinguished by both nature of the repeats, the makeup of the cohort of associated Cas proteins, and by molecular phylogeny within the more universal Cas proteins such as this one. This model is of type EXCEPTION and provides more specific information than the EQUIVALOG model TIGR00287. It describes the Cas1 variant of the NMENI subtype of CRISPR/Cas system.	2.03972e-113
NZ_CP007766.1|WP_044598278.1|235508_236732_-|glucose-6-phosphate-isomerase	gnl|CDD|235168	PRK03868, PRK03868, glucose-6-phosphate isomerase; Provisional.	0
NZ_CP007766.1|WP_044598280.1|237627_238209_+|YigZ-family-protein	gnl|CDD|376491	pfam01205, UPF0029, Uncharacterized protein family UPF0029.	5.02513e-45
NZ_CP007766.1|WP_044598276.1|233580_234744_+|2,3,4,5-tetrahydropyridine-2-carboxylate-N-succinyltransferase	gnl|CDD|225082	COG2171, DapD, Tetrahydrodipicolinate N-succinyltransferase [Amino acid transport and metabolism].	6.17983e-88
NZ_CP007766.1|WP_044598264.1|220414_221257_+|flagellar-motor-switch-protein-FliY	gnl|CDD|236264	PRK08432, PRK08432, flagellar motor switch protein FliY; Validated.	3.06846e-145
NZ_CP007766.1|WP_044598272.1|229225_230392_-|ATP-sulfurylase-(sulfate-adenylyltransferase)	gnl|CDD|224957	COG2046, MET3, ATP sulfurylase (sulfate adenylyltransferase) [Inorganic ion transport and metabolism].	3.97524e-84
NZ_CP007766.1|WP_044598270.1|227334_227760_+|CRISPR-associated-endonuclease-Cas2	gnl|CDD|226043	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms].	1.57163e-44
NZ_CP007766.1|WP_044598262.1|218645_219332_+|RNA-polymerase-sigma-factor-FliA	gnl|CDD|235901	PRK06986, fliA, flagellar biosynthesis sigma factor; Validated.	4.37656e-103
NZ_CP007766.1|WP_044598267.1|223113_223365_-|helix-turn-helix-transcriptional-regulator	gnl|CDD|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	1.67632e-06
NZ_CP007766.1|WP_044598268.1|223471_226459_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9	gnl|CDD|226044	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms].	0
NZ_CP007766.1|WP_044598265.1|221253_221889_+|TIGR00730-family-Rossman-fold-protein	gnl|CDD|224527	COG1611, COG1611, Predicted Rossmann fold nucleotide-binding protein [General function prediction only].	8.8063e-48
NZ_CP007766.1|WP_044598277.1|234929_235379_-|DNA-binding-ferritin-like-protein	gnl|CDD|223854	COG0783, Dps, DNA-binding ferritin-like protein (oxidative damage protectant) [Inorganic ion transport and metabolism].	9.22683e-50
NZ_CP007766.1|WP_044598275.1|232466_233570_+|Mrp/NBP35-family-ATP-binding-protein	gnl|CDD|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	2.4345e-131
NZ_CP007766.1|WP_044598263.1|219333_220425_+|flagellar-motor-switch-protein-FliM	gnl|CDD|235849	PRK06666, fliM, flagellar motor switch protein FliM; Validated.	4.23278e-151
NZ_CP007766.1|WP_044598266.1|221851_222868_+|tRNA-2-thiouridine(34)-synthase-MnmA	gnl|CDD|234664	PRK00143, mnmA, tRNA-specific 2-thiouridylase MnmA; Reviewed.	1.86009e-163
NZ_CP007766.1|WP_044598274.1|231241_232357_-|bifunctional-2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase/2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase	gnl|CDD|236492	PRK09382, ispDF, bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein; Provisional.	0
NZ_CP007766.1|WP_044598279.1|236725_237553_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU	gnl|CDD|273443	TIGR01099, UTP--glucose-1-phosphate_uridylyltransferase, UTP--glucose-1-phosphate uridylyltransferase. Built to distinquish between the highly similar genes galU and galF [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides].	1.12956e-152

Protein sequences

>NZ_CP007766.1|WP_044598270.1|227334_227760_+|CRISPR-associated-endonuclease-Cas2
MIEDKFMRVLLMFDMPTKSKKDQKNASKFRTSLIKLGFFMMQFSVYVKICKGLTSAKTTIKSVEKILPPYGNIRVLTITEKQFDNMQILLGGVSFNEKMNDDKNLVLFEYDEKTQDFKYSNEKTNKQNKTNKLKQPSLFEF
>NZ_CP007766.1|WP_044598269.1|226448_227348_+|type-II-CRISPR-associated-endonuclease-Cas1
MAYDEAFKSILISNQAKLSLELNHLVIKQDDKEARFFLKDINFIILESLQASITSSLLSILAKYKIILLTCDESHNINGIFSPFLGHFISAKVAKRQIKVSLQRKAILWQKIIKNKISNQAYVLKTTNHSKEAKELLNMAKNVNLNDSKNLESTAAALYFKTLFGKDFARNDICFINSGLNYGYAIIRSFIVRAVCISGLLPWQGIKHDNIYNDFNLCDDLIEVFRPLIDLCVFKLKDIKDSEFLDKETKQKLIGILQEEVILENKSYPLNRAINFYVQNFKNALLDNDEFMMVFYDRR
>NZ_CP007766.1|WP_044598268.1|223471_226459_+|type-II-CRISPR-RNA-guided-endonuclease-Cas9
MKILGFDIGINSIGWAFVENDELKDCGVRIFTKAENPKNKESLALPRRNARSNRRRLKRRKSRLIAIKHILAKELNLNYKDYIANDGELPKAYEGKLTNVYELRYKALNQKLEAKDLARVILHIAKHRGYMNKNEKKSNDSEKGKILSALKNNALKLEKYQSVGEYFYKEFFQKYKENTKNFIKIRNTKDNYNNCVLASDLEKELKLILEKQKEFGYSYNDDFIKEIINIAFFQRPLKDFSHLVGSCTFFEEEKRACKNSYSAWEFVALSKIINELKRLEKISGELISAQTINEILNHILDKGNITYKKFRSCINLHESIEFKSLNYDKDNAESAKLVDFKKLIEFKKALGEHSFNRQELDEIATHITLIKDNDKLKTALEKYNLNNEQINALLEIEFNDHINLSFKALNLILPLMREGKRYDEACEIVNLKSKTSNQKQDLLPAFCDSIFSQELSNPVVNRAISEYRKVLNALLKKYGKVHKIHLELARDVGLSKKAREKIEKEQKENKEINDWALDECEKFGLKANNKNILKLKLWKEQKEICAYSGKKISIEHLKDEKALEVDHIYPYSRSFDDSYMNKVLVFTKENQEKLNKTPFEAFGKNIERWNKIQALAQNLPYKKKNKILDENFKDKQQQDFISRNLNDTRYIATLIAKYTKEYLNFLPLNENENTNLKSGEKGSKIHVQTINGMLTSVLRHTWGFDKKDRNNHLHHALDAIIVAYSTNSIIKAFSDFKKNQELLKAKLYAKELTSDNYKHQAKFFEPFEGFREKILNKIDEIFVSKPPRKRARGTLHKETFYPEETMIKKYNSKEGLNIALNCGKIRKIGTKYVENDTMVRLDIFKKQNKFYAIPIYTMDFALGILPNKIVIAGKDKNNNPKQWQEIDESYEFCFSLYKNDLILLQKKDMQEAEFAYYNSFDIDSSRINIKKHDNKFENLTDNQKLLFTNQEKNRTGIQNLKIFEKYIVTPLGDKIKADFQPRQNISLKTSKKYGL
>NZ_CP007766.1|WP_044598267.1|223113_223365_-|helix-turn-helix-transcriptional-regulator
MKDDFSNSSKKEILNFYKKVSSNVRKFREKRGISQLELALDIGIKSVAFYSNCECNRYGKHFNLEHLYKISKSLEIPLKDLLE
>NZ_CP007766.1|WP_044598266.1|221851_222868_+|tRNA-2-thiouridine(34)-synthase-MnmA
MKILVAMSGGVDSTVTAYKLKQAGHEVQGCYMKLHGKANYHEENIKKVEKVAKFLGIDYHILDLQDDFKNQVYMPFVNTYKEGKTPNPCALCNRFIKLGKLLEFAKKLGCEKLATGHYARIENNLIKTAVDESKDQSYFLANADKEALKYLIFPLGEMKKEDVKKFASTIDVLKSFATQKESSEICFVEDTYVQVLDQFMDTKIPGIVRDSSGKEVGKHEGYMHYTIGKRRGFEVRGAHEPHFVLKIDPKKNEIIVGKKEELKISEFNLDSINLFIDAKELDCEVKIRYRSKSTPCKVLINEDKSAKIILQEPVYGLASGQMAVFYDKDLVLASGFIK
>NZ_CP007766.1|WP_044598265.1|221253_221889_+|TIGR00730-family-Rossman-fold-protein
MKEYIIEDISYLKELEKIQKGVTFFGSARLKEDNEYCILASNLAKKLANDGYSIISGGGGGIMQAANYGAIQSKTSHLKSFGFNIHLPFEQKANDFLEYNITFKSLAIRKMALIQKSLAFVIFPGGFGTLDEFFEILTLKQLSFKKDVPIILVGRKFWHTLDEFIKTSLLELGTISKNDELKYSISDDLDEIIRMIKEKDENSCRNEWGCR
>NZ_CP007766.1|WP_044598264.1|220414_221257_+|flagellar-motor-switch-protein-FliY
MINDFLGIFVNECVSTIEGLTGKNAEFSEYYEYDVNSQDSMTPPLVSATFSVNNDMKIKVLASAVLMSAIGEWMMGEEEISKNSELNEDEMDAAKEAIQNIISAFSTTLGAQKEIPKMEFSLDSCEFVADTLELGGFHKLYLYNVKIADLEEKVSLVFDEKIYKVLTKTDLEEIVATQDQESSHEHKVLANVEELKNIGLIMDVRLPIRVRIGSKKMLLKDVLTMDIGSVIELDQLANDPLEILIGDKKIAYGEVVIVDGNFGVQITEIGSKKERLEQLR
>NZ_CP007766.1|WP_044598263.1|219333_220425_+|flagellar-motor-switch-protein-FliM
MAEILSQEEIDALLEVVDDDSDESAASSKLEEIEDKRDIVVYDFKRPNRVSKEQLRSIKGIHDKLARNLASQISSMMRSIVEIKLHSVDQMTYGEFLMSLPSPTSFNVFSIKPLDGNCVLEINPSIAFPMIDRLLGGQGESFDTLRELTEIELNLLDSILRIIMQRLKESWMNVTEIYPSVEAKESSPNVVQIVSQNEIVIMVVMEIIIGNSSGMVNICYPVVHLESILSRLANRDIMMGETSAKKSRNKELKTLIGRAEVIYEAMLGKTFINVNEFLDLKQGDILKLDRTADDKAIVAIDKKEVFLAQVGLHRFRKSIKILELIKTDKDEIKEMLERYEDERRAKANSYNENEDIEEEEDDQ
>NZ_CP007766.1|WP_044598262.1|218645_219332_+|RNA-polymerase-sigma-factor-FliA
MQPHNAYASALKKEQDDLVISYMPALRAMAFRLKERLPASIDVNDLISIGVEEMIKLSRRYDKEQNDNFWGFARKRVNGAMLDYLRSLDVMSRSNRKIIKEIDAIVDEFYQENEKEPDDEYLAKRLNLEVEKVKEARAAHAISLVMPLDEQLNCFNDSNIIEQIEKEELIEKINAVLEEFKERERLVIQLYYYEELNLKEIAEVLEISESRISQIHKRLLKKIRERLV
>NZ_CP007766.1|WP_044598261.1|218299_218659_+|hypothetical-protein
MRPENFVAFFTVCGFFIGLMFTIVNIEDAVEIVVYTCLITFIFYVLIHIVIMIFVDVNKISGRSFNKEKYENDNNSFIAELAAREKKMDYLLEKLQEEREDLKKLETSHKKKSVKHAAA
>NZ_CP007766.1|WP_044598271.1|228730_229222_-|phosphatidylglycerophosphatase-A
MQKLFLTFFYSGSINKAPGTFGTIAALIPAFFILRYLGIGTLILLAILLFLVSIKIIDQYEKQTGKHDDKHIVIDEVVGVFLALAICGQSVFTFLLSFVLFRFFDITKPSIIGKIDKKTKGGLGVMLDDVLAGIFAGLFSAVIYGILLKFNLLWFDISIMEIF
>NZ_CP007766.1|WP_044598272.1|229225_230392_-|ATP-sulfurylase-(sulfate-adenylyltransferase)
MALQRKNSIIISEEEYEVLCFIKEGIFGSFTKLMNEKERDEVLSTGMINKQKIPYTLTFAPASTKENDTTLKNAKIGEKLEFICDDKVVGHIHLESKFENDKNANDIFRPNACLIQDFGKICISGDFEIYQNRIKTLKEEFEKIKKRLNPHNITAIVSSFDPFHRAHERILRWAIEQSDLVIIFLIESYENNGLSLSLKKRCFDVFAQNYLPSSRVLLIPLHNIKIFASHLNPILECALAKSFDCNKVFVGQNHAGLGMYFNQNRAFTVLDDFAKDYNIEVTILPEFVFCDECKMIVSTKSCPHGAHHHMKYHGDSLKNLLRLGIIPPAVFIRREVSALILSELFPNRFHNKQNIYSNLFPTHGILEHRSDKEFYEQLIKLHQMSYMV
>NZ_CP007766.1|WP_044598273.1|230369_231245_-|receiver-domain-protein
MKVLIVENEFYLAQSIGSKLNSIGYECDIIANVSELTHHDYEIILLSTSMANFEHIIEIFKHKIIILLISYISSDTVLAPLKAGASDYIQKPFMIEELTRKIKHFQDFKKINILNHTYKSYLKHKFETAKLPDFDYKKIKLPLILKSNHQIFADHFVFNYTNEHNIANIYIDLSHQHNIDKIFKDNSLYYLVNFQNLKSIEKEKLLELASKKSVIIYTNSNLTHPDFQTIELGDDEKSFESNGILTIDDYVKHIIVSYQNVFPDTDLSKKLGISRKSLWEKRKKYGITKKK
>NZ_CP007766.1|WP_044598274.1|231241_232357_-|bifunctional-2-C-methyl-D-erythritol-4-phosphate-cytidylyltransferase/2-C-methyl-D-erythritol-2,4-cyclodiphosphate-synthase
MLDISLIMLSAGESSRFNAPVKKQFLRLGELPLWLYVTKNLSSFYPFKQIIVTSSNTSYMKKFAPEYNFIQGGDTRAKSLLNALELVQSEYVLVSDVARVLISKSLFDNIIENHDKADCISPVLKVSDTTIYAQELIERDKIKLIQTPQLSRTSMLKKALKQNTNFTDDSTAIKAIGGKIWYIQGDEMAKKITFKEDLKNLNLPKPSWEIFNGNGFDVHEFGENRPLLLGGVKIHDSMGLKAHSDGDVLTHALIDALLGAAGLGDIGELFPDNDMQYKNADSMLLLQNVYTMVQNYGFDFVNADVTIIAQTPKMKDFKEDIAFNIAKVLKTTPNKINIKATTTEHLGFIGRKEGIAVLASVNLKYFDWMKL
>NZ_CP007766.1|WP_044598275.1|232466_233570_+|Mrp/NBP35-family-ATP-binding-protein
MKEKIEERLKQVIYPGFKKDIVSFGFVKKIETNEQKAHIVVEIVSANAQVAQELKLGIASALKDLNLELNLEIIQPKAPEEKSNSRSGKNIAPQIKNFLMISSGKGGVGKSTTTLNLAISLAKMGKRVGLLDADIYGPNIPRMLGESKSKPEIVGQKIRPILSHGVYMMSMGVLIEEGKGLMWRGSMIMKAIEQLLADVLWPELDVLLLDMPPGTGDAQITLAQSVPVSAGVCVSTPQVVSLDDSKRALDMFEKLHIPVAGIIENMSGFLCPDNGKEYDIFGKGTTEEMAKTYKCDVLAQIPIEMSVREGGDSGKPVSFYMPESVSSKRYLQAAEKIWEFIEKVNQEGKVDNSAIQPVMNGKSACSQ
>NZ_CP007766.1|WP_044598276.1|233580_234744_+|2,3,4,5-tetrahydropyridine-2-carboxylate-N-succinyltransferase
MAIENKEEFLNLIKQIEQRINYKKPKAFAIARLDLSQVDSSKKLQANFGMINFEQNYAAAAVMFEAFFRRGVDVDFNESEFVATLIKEDLDFALECFAPFLQEQGHKNIEVIKAAKENFRENAFSFVCIFEDEAPKSLESVYLKLYLLSSKKVPLRSLNLTGAFGILPNVAWSDNRPIDLDFLRENEIDLKMSGRYPKIDYVDKFPRFLAHIIPEDNTRILESSKVRMGAVLAAGTTIMPGAAYVNFNAGTTGACMVEGRISSSAVVGEGSDVGGGASILGVLSGTSGNAISIGKACLLGANSVTGIPLGDNCIVDAGIAVLEGTKFALKNKEELQKINPDFNFDKDIYKGLELAGLNGLHFRQDSQSGTMIVAFNKKAIKLNEDLH
>NZ_CP007766.1|WP_044598277.1|234929_235379_-|DNA-binding-ferritin-like-protein
MSVTKQLLQLQADAHSLWIKFHNYHWNVKGLQFFSIHEYTEKAYEEMAELFDDCAERVLQLGEKAVVCPSVLLENAKAPKIQKDCFTPVEVLELIREDYKYLLAEFKKLNEEAEKASDTTTAAFAQENIAKYEKVLWMLNSTIQNTCSM
>NZ_CP007766.1|WP_044598278.1|235508_236732_-|glucose-6-phosphate-isomerase
MLNNTLFFKTQDFKKITAYANRMNDELKSGDIGYYHLVDTSFDLIKESKEFIATKTHIENIVLVGMGGSSCGVKALKELLFDHVEDKKLFIIDNTSSHTFTQTMQKIEPKKTLFIIASKSGTTIEVVSLFKLIIAYFDFKNENLHENFVFITDLNSKLHKLGEELKIKCFFIPENVGGRFSVLSAIGIVPLTFCNYDTKALLEGAKACYVDFFEKKCEQILQKAYHYCTHKSAHINVLFSYGDAFKGFNEWYIQLIAESLGKKQGFKRIGLTPIALIGARDQHSFLQLIMDGPKDKTITFLKIKDSQKSPSIPNISFNYLQTCDFTNEVNLHDLLNAQCDATMHALIAENLSVDVIELEKLDAWHCGYLMYYYELFTSACGIMLGINTYNQPGVEVGKLILKNMLSK
>NZ_CP007766.1|WP_044598279.1|236725_237553_-|UTP--glucose-1-phosphate-uridylyltransferase-GalU
MLQTCIFPAAGYGTRFLPATKTLPKEMLPILTKPLIHYGVDEALEAGMETMGFVTGRGKRALEDYFDISYELEHQIAGTKKEYLLSEIRTLIDRCTFTFTRQNEMKGLGDAVLKAKPLVQDEAFGVILADDLCVNEDGVNVMAQMVKIYEKYRCSVIAVMEVEENQVSNYGVIAGNAVEEDLIMVNSMIEKPDPKDAPSNLAIIGRYILTPDIFGILENTKAGKNGEIQLTDALLSQATNNMVLAYKFKGKRFDCGSVEGFVEATNYFYEKSKKC
>NZ_CP007766.1|WP_044598280.1|237627_238209_+|YigZ-family-protein
MKTIEQIYQAKIEIKKSTFLAFLCPFKDFKNLMQKLKSEHLKAVHFVYAYRYLNEFGQIIEDKSDDGEPKGTSAMPCLNVLRGALLVNCAVIVVRYFGGIKLGTGGLVRAYSEATNEAILNAMLLEFEAKNILNLNIPFHLYARFEHFLKKHNIDYKVVFKEVVELSLNLNSKEEKEFKNFAKEFEFSGLIWK

Crispr_ID: NZ_CP007766_2

• CRISPR_ID: NZ_CP007766_2
• CRISPR_location: 255406-255507
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP007766_2

Consensus_repeat	Method
AAATTTGCTATTTTAGGTGGTTTT	CRISPRCasFinder

spacers of NZ_CP007766_2

>2.1|255430|54|NZ_CP007766|CRISPRCasFinder
GCTGGGGTTATTTCTGAAGGATATTTTAAAAATATTGTTTTAAATGATATAAGA

CRISPR arrays and Neighbor proteins around NZ_CP007766_2

CRISPR arrays

The CRISPR arrays of NZ_CP007766_2

>merge|NZ_CP007766|2|255406-255507|CRISPRCasFinder
AAATTTGCTATTTTAGGTGGTTTTGCTGGGGTTATTTCTGAAGGATATTTTAAAAATATTGTTTTAAATGATATAAGAAAATTTACTATTTTAGGTGGTTTT

>NZ_CP007766|2|2|255406-255507|CRISPRCasFinder
AAATTTGCTATTTTAGGTGGTTTT	GCTGGGGTTATTTCTGAAGGATATTTTAAAAATATTGTTTTAAATGATATAAGA
AAATTTACTATTTTAGGTGGTTTT

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007766.1|WP_044598298.1|265484_266351_+|transcriptional-regulator,-LysR-family	unknown	unknown	gnl|CDD|176112
NZ_CP007766.1|WP_044598299.1|266342_267542_-|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	unknown	unknown	gnl|CDD|235162
NZ_CP007766.1|WP_044598292.1|259772_260159_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	unknown	unknown	gnl|CDD|226180
NZ_CP007766.1|WP_044598287.1|243836_244412_+|hemerythrin-family-non-heme-iron-protein	unknown	unknown	gnl|CDD|225331
NZ_CP007766.1|WP_044598285.1|241589_242954_+|phosphomannomutase/phosphoglucomutase	unknown	unknown	gnl|CDD|100091
NZ_CP007766.1|WP_147575108.1|263815_264316_+|two-pore-domain-potassium-channel-family-protein	unknown	unknown	gnl|CDD|369572
NZ_CP007766.1|WP_044598283.1|238954_240529_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein	unknown	unknown	gnl|CDD|223562
NZ_CP007766.1|WP_049984553.1|244632_247185_+|hypothetical-protein	unknown	unknown	unknown
NZ_CP007766.1|WP_044598281.1|238229_238574_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP007766.1|WP_049984554.1|247207_250381_+|hemagglutination-domain-protein	unknown	unknown	gnl|CDD|214908
NZ_CP007766.1|WP_044598288.1|250391_253319_+|hemagglutination-domain-protein	unknown	unknown	gnl|CDD|214908
NZ_CP007766.1|WP_044598295.1|262783_263623_+|universal-stress-protein	unknown	unknown	gnl|CDD|238182
NZ_CP007766.1|WP_044598291.1|258808_259783_-|tRNA-lysidine(34)-synthetase-TilS	unknown	unknown	gnl|CDD|366502
NZ_CP007766.1|WP_044598294.1|261679_262780_+|peptide-chain-release-factor-2	unknown	unknown	gnl|CDD|234799
NZ_CP007766.1|WP_044598297.1|264339_265383_-|putative-sulfate-exporter-family-transporter	unknown	unknown	gnl|CDD|225411
NZ_CP007766.1|WP_044598286.1|243248_243824_+|hemerythrin-family-non-heme-iron-protein	unknown	unknown	gnl|CDD|274154
NZ_CP007766.1|WP_044598293.1|260286_261603_-|30S-ribosomal-protein-S12-methylthiotransferase-RimO	unknown	unknown	gnl|CDD|223694
NZ_CP007766.1|WP_044598284.1|240583_241588_+|diguanylate-cyclase	unknown	unknown	unknown
NZ_CP007766.1|WP_044598282.1|238625_238958_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP007766.1|WP_044598290.1|257095_258832_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl|CDD|225387

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP007766.1|WP_044598298.1|265484_266351_+|transcriptional-regulator,-LysR-family	gnl|CDD|176112	cd08420, PBP2_CysL_like, C-terminal substrate binding domain of LysR-type transcriptional regulator CysL, which activates the transcription of the cysJI operon encoding sulfite reductase, contains the type 2 periplasmic binding fold. CysL, also known as YwfK, is a regular of sulfur metabolism in Bacillus subtilis. Sulfur is required for the synthesis of proteins and essential cofactors in all living organism. Sulfur can be assimilated either from inorganic sources (sulfate and thiosulfate), or from organic sources (sulfate esters, sulfamates, and sulfonates). CysL activates the transcription of the cysJI operon encoding sulfite reductase, which reduces sulfite to sulfide. Both cysL mutant and cysJI mutant are unable to grow using sulfate or sulfite as the sulfur source. Like other LysR-type regulators, CysL also negatively regulates its own transcription. In Escherichia coli, three LysR-type activators are involved in the regulation of sulfur metabolism: CysB, Cbl and MetR. The topology of this substrate-binding domain is most similar to that of the type 2 periplasmic binding proteins (PBP2), which are responsible for the uptake of a variety of substrates such as phosphate, sulfate, polysaccharides, lysine/arginine/ornithine, and histidine. The PBP2 bind their ligand in the cleft between these domains in a manner resembling a Venus flytrap. After binding their specific ligand with high affinity, they can interact with a cognate membrane transport complex comprised of two integral membrane domains and two cytoplasmically located ATPase domains. This interaction triggers the ligand translocation across the cytoplasmic membrane energized by ATP hydrolysis.	1.52825e-46
NZ_CP007766.1|WP_044598299.1|266342_267542_-|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase	gnl|CDD|235162	PRK03815, murD, UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.	0
NZ_CP007766.1|WP_044598287.1|243836_244412_+|hemerythrin-family-non-heme-iron-protein	gnl|CDD|225331	COG2703, COG2703, Hemerythrin [Inorganic ion transport and metabolism].	2.54842e-27
NZ_CP007766.1|WP_044598285.1|241589_242954_+|phosphomannomutase/phosphoglucomutase	gnl|CDD|100091	cd03089, PMM_PGM, The phosphomannomutase/phosphoglucomutase (PMM/PGM) bifunctional enzyme catalyzes the reversible conversion of 1-phospho to 6-phospho-sugars (e.g. between mannose-1-phosphate and mannose-6-phosphate or glucose-1-phosphate and glucose-6-phosphate) via a bisphosphorylated sugar intermediate. The reaction involves two phosphoryl transfers, with an intervening 180 degree reorientation of the reaction intermediate during catalysis. Reorientation of the intermediate occurs without dissociation from the active site of the enzyme and is thus, a simple example of processivity, as defined by multiple rounds of catalysis without release of substrate. Glucose-6-phosphate and glucose-1-phosphate are known to be utilized for energy metabolism and cell surface construction, respectively. PMM/PGM belongs to the alpha-D-phosphohexomutase superfamily which includes several related enzymes that catalyze a reversible intramolecular phosphoryl transfer on their sugar substrates. Other members of this superfamily include phosphoglucosamine mutase (PNGM), phosphoacetylglucosamine mutase (PAGM), the bacterial phosphomannomutase ManB, the bacterial phosphoglucosamine mutase GlmM, and the phosphoglucomutases (PGM1 and PGM2). Each of these enzymes has four domains with a centrally located active site formed by four loops, one from each domain. All four domains are included in this alignment model.	0
NZ_CP007766.1|WP_147575108.1|263815_264316_+|two-pore-domain-potassium-channel-family-protein	gnl|CDD|369572	pfam07885, Ion_trans_2, Ion channel. This family includes the two membrane helix type ion channels found in bacteria.	2.45247e-08
NZ_CP007766.1|WP_044598283.1|238954_240529_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein	gnl|CDD|223562	COG0488, Uup, ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only].	0
NZ_CP007766.1|WP_044598292.1|259772_260159_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin	gnl|CDD|226180	COG3654, Doc, Prophage maintenance system killer protein [General function prediction only].	1.76236e-11
NZ_CP007766.1|WP_049984554.1|247207_250381_+|hemagglutination-domain-protein	gnl|CDD|214908	smart00912, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	2.68937e-10
NZ_CP007766.1|WP_044598288.1|250391_253319_+|hemagglutination-domain-protein	gnl|CDD|214908	smart00912, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	1.35549e-12
NZ_CP007766.1|WP_044598295.1|262783_263623_+|universal-stress-protein	gnl|CDD|238182	cd00293, USP_Like, Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.	4.57152e-16
NZ_CP007766.1|WP_044598291.1|258808_259783_-|tRNA-lysidine(34)-synthetase-TilS	gnl|CDD|366502	pfam01171, ATP_bind_3, PP-loop family. This family of proteins belongs to the PP-loop superfamily.	7.45626e-62
NZ_CP007766.1|WP_044598297.1|264339_265383_-|putative-sulfate-exporter-family-transporter	gnl|CDD|225411	COG2855, COG2855, Predicted membrane protein [Function unknown].	5.20911e-77
NZ_CP007766.1|WP_044598286.1|243248_243824_+|hemerythrin-family-non-heme-iron-protein	gnl|CDD|274154	TIGR02481, hemeryth_dom, hemerythrin-like metal-binding domain. This model describes both members of the hemerythrin (TIGR00058) family of marine invertebrates and a broader collection of bacterial and archaeal homologs. Many of the latter group are multidomain proteins with signal-transducing domains such as the GGDEF diguanylate cyclase domain (TIGR00254, pfam00990) and methyl-accepting chemotaxis protein signaling domain (pfam00015). Most hemerythrins are oxygen-carriers with a bound non-heme iron, but at least one example is a cadmium-binding protein, apparently with a role in sequestering toxic metals rather than in binding oxygen. Patterns of conserved residues suggest that all prokaryotic instances of this domain bind iron or another heavy metal, but the exact function is unknown. Not surprisingly, the prokaryote with the most instances of this domain is Magnetococcus sp. MC-1, a magnetotactic bacterium.	4.9664e-33
NZ_CP007766.1|WP_044598293.1|260286_261603_-|30S-ribosomal-protein-S12-methylthiotransferase-RimO	gnl|CDD|223694	COG0621, MiaB, 2-methylthioadenine synthetase [Translation, ribosomal structure and biogenesis].	8.60263e-146
NZ_CP007766.1|WP_044598294.1|261679_262780_+|peptide-chain-release-factor-2	gnl|CDD|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	0
NZ_CP007766.1|WP_044598290.1|257095_258832_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl|CDD|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.01421e-68

Protein sequences

>NZ_CP007766.1|WP_044598288.1|250391_253319_+|hemagglutination-domain-protein
MKTQNKTIQHILLSGVVASLLFSPAFALPSGGKFTHGTSGTITKPNNTTMNIHGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNIAHGTNKSTIAGVLNASGKNVFLINPNGVIIEKGGIINANRFVASTSSMDSKAMQEFANGQYANGKTIDYATFSPVFKPNGGNVVNMGGILDVKNITFQGNKVILNANTNYTEKDKFISANNITLEGKEVYIDVGNINGDKIQNIKISADKGSMYLNASGYYYNPNSFLVFDKYRNSNSNFKVYKYVGIGSVQDWWHFAKGWNDNKEGFRSVANEYRLTNNINFDGKNKNYANYCIDGLGCTNMIVAAKYDNVFNKTFDGQGFVLSNINIDTTDITGADFSGIFGRVNNATFKNIKIDYNQGSIINNSDRFSYNAGGFIGYSEQSNFSNISLENINNISSKGSSWVFVGGFVGGSTSSKFENIKINNINKIEVIGDEYSAFARAGGFIGHISTDKRNDTLFNKIELSNIDNIITNSSGDVSSGGFVGSIRTRELFGMEKIRFFDITLSNIENIKSNAIGDESVASSGGFFGALSDDNGKVSFEFNNIAIKNITSIVATGNKSYASGFGNKEDSDKSNNSNFTNIFIYFNPNAVISANDKNNVDIFTNLLKANTNNIQIYHKNGSFNGINNQHDLSLLKKYNTNELEQEFANAIKGIKLPSINTPSNVGKPSLPDVEAIKNENIEFQNQWLNKEVVQAILDDILNGKYRVSINKFGEIQFHVSSVNGVVITLDSIKQSLDFLDKLKEENSTWEANELKSIYTKYNKALKIKDEFVNAQKHLFDNDKNSFYKTYAEYEKELMLYNSYVKKIESGQMSINDSVFLASLDKINTLAKILQEKRDKVNAIADNLNKENIAYKNYGYSNFKFLGDFATDFVHNPQSPDVDTPNKPELPKYDQDFEQTASLNLIGDNAIEEEEEEKEIDEAAITQRTKTCIVSDNFKTMNPCVVGY
>NZ_CP007766.1|WP_049984554.1|247207_250381_+|hemagglutination-domain-protein
MQNKTIQHILLSGVVASLLFSPAFALPSGGKFTHGTSGKININGNTMDITGTTPNKNHIIQWGGGFSINQGEKVNFTTSKHNYLNIAHGTNKSTIAGILNAKDNNVFLINPNGVIITKTGNINANRFVASTSSLQANHFDEFKTQGANFSPVFKANKLGNVVNMGNINANDVLLIGNKVDIQGGKLGNTSSKTHLVGNYVYIDADSAKLNSNNINVTATKDGYIQRKMINFANDGYKFGSNAKVNAVDYQNHKGNSNFKKALTIGNMGNEKANAIEWWHFAKGWNEGLGHIRSVDEFKLVGNIDFSGNKGKGEEGKDWKNYANYCIDGLGCTNMIVGTTMYENAFNKIFDGQGYTLKNINIDATAIGEKVFNIGIFGYANNATFKNINIDYMGGSIKFKNNNYQASRYVGGFIGRALGVNYVNNITLKNISEINVDGKGANYTGGFAGSFGGYGSNIYIENIGSIKSVLSDNSSNIHFIGGFAGEIYGIFSDIALKNIASISQYNHFINDIYALTSIGGFAANASGSYNNIYVNVGDIYINRYPDRGYIGGFVGEYDGTYSYANNGFQNIKLKIGSIKTDNKGWIGGQGGFIGTISARDNYDGSPVYFKNISVEIDKGIYSLYDFGAFIGEINPDFANTTDKKILVDFSNINIYFNKNSKSNLDGKFFGRLNGKGTYTFNNIHIYHHKDDLANATADKDYWNDFNKNGYVFDKINIHTYTDETQANAYKDFLSKANSIEKPNIIPPTITPDNPNKPSDSDVILTSDDLHQDIIQGIIDSIRNEKYTIDIKNLYSLIQAFKGLNKDSNENEIKTIVKTHLGIKDDDKALSIAQSISFLLHYNEINFNNKLDKTALELYNNQIKPNVFNTLEIITYLDTNKNNIIAQLQQYESIKNDFKIKEQAYFKAQAEFNKLLDLVNKGKLNYNDPKFTQAFDNWTKAYNAYNSLSNDIGELNSKVNQYTQYINTTLGYKQFAFVKFDNIIKTDLTKPILPDIDNSLGGDKQPVFEQTASLNLIGDNAIEEEEEKKEIDEAALTQRARTCIVSDNFKTMNPCVIGY
>NZ_CP007766.1|WP_049984553.1|244632_247185_+|hypothetical-protein
MQKLMSKKSLMGSNKSFLKLSLLAIFSLSSLYGASQAEYDEKSKKYIIKQHQFNNNQVYDYEANTFKFLNGKNYYGQMATNKNISNVTLVYDNPKDQAHAKMGDMFFKQDILTPSIKEDIFVVNGFHGAYSIDDTIEQISYIPFLVSAYVFNAKANNNTLVLKAGELSSVYYLKPTDKEVMNPKATGYNNQYNFLITPAIARKGEANNNTLDFLKDAYVNMGVENTYTLPLNGAPYIVGAFGIDANVNNNSVILNKGVKIDFHTTPYRQGVLGKSVFDERMTHVMGAITYNGNAKNNKVVFDGASLLVHGPSGAYSTSAATHLGGAFVDVNDNQNYEVSDNKLLINELKLDLRVDTKNTPLAYNAILNGEIYGGKIIQGNAYKNTIDIKDLQTLLALNTNVEVRALLDFYAGFARNGIANDNKIYLNLKTPFTINSNFTGKNEFNLYGAYASKGASNNGVYVKGDLTQESIVENYQDKIQITAAQTLSSKANNNTISISNTNVSMPLYLYGVAKASIDGKDYYASSANANTIKLDSVKSGKNLTTIIEADEVSKSNISYNLVQSLSNASNIDKGSKIIIRANKTANENTLNIKDYSSAAYDNIYVINAKEESANNTMIFNNLALGTASDVREGRVVISAGIAKNVYNNFTHIANLNIDEYKNNDALFISASGVNQEEGKSYNNTLYLSGATNIFKNTSIDVLAGNILQIKNENAFSYKSLEHKSKTNNHLVLNTNINAKLVNNFDHFSFILKDNTKTYLSAKEAINLSKNSSINVYANNLKNKSFVLMHSEKGFVDENGKNLGKKDMQNLLNVVAENNQKLHKNINAKLQKANYTLSLSEDEKSIVVNLN
>NZ_CP007766.1|WP_044598287.1|243836_244412_+|hemerythrin-family-non-heme-iron-protein
MEAFPVWNDKYSIKNDNIDLQHKTLFNLADKTAKLLNRHIYKAEIKELLSEFFEYMKTHFKDEEDFMCSIEYPYLLEHKSMHKKIIKDMSILINDCSSTNDLKEKLYEIVSVWLLEHIVEHDMMIYKWQQRVKNEEVKEEVKEEEKFLYICSCSETIHKLDYGTHVKIKYLHIAFKCKKCLKELIFYNPED
>NZ_CP007766.1|WP_044598286.1|243248_243824_+|hemerythrin-family-non-heme-iron-protein
MIKWMDDYSVHNKTIDDQHKALFDIAKKAYLIAERHASISDIKLVLNELFEYVKTHFKDEEEHMEKIGYPDLAHHKKIHQEITLSLIALVKNIKTINDFKEKLNIITEKWLLEHILKEDMKYYKYQKQKFKEQQEATFEEDTSFEEVVPEFVIYICGCKGEKHKIPHHIHTKICKGSKYSCKVCKSVIRTA
>NZ_CP007766.1|WP_044598285.1|241589_242954_+|phosphomannomutase/phosphoglucomutase
MLDLIFREYDIRGLYPSELNEKSVKAIGYALGLEMKAKGCEKVSIGYDARYSANELFNYLISGLNKANMQVFNIGLAPTPMGYFSLFFDEIFDANIMITGSHNPKEYNGFKITINKESFFGADLKKLSLKVQEYLELEIKDDLRYENYDVKSLYIDFLVKHFTHLKNYKEKIIIDCANGATGVIIKPLVEKLGLNAQILFEEPDGNFPNHAPDPTELENLHALQVALKENENAKMGFAFDGDGDRLVVASKDYVFKGDELCYLFAKNIKNPRVLGEVKCSKNLFDEVAKFGFVMMGKTGHSNIKKTMKEQNIDIAAELSGHIFFKDRYFGYDDGIYAFLRTLELLVNGFDIEKLVKELPKLYASEEIKLKVSEENKFQIIEKFKEKVKANAFENVLDCNEIDGVRITFKDGWVLLRASNTSPYLIMRSEASTLEFKDFLEKRVRELFDTILTEI
>NZ_CP007766.1|WP_044598284.1|240583_241588_+|diguanylate-cyclase
MDFSYLMLKTLPSMTLAFNFLALFLAYFFKQNKIFFLLLLILCARALSLVASEYQAHLFISVFLPFSFVLFVFLQDSKLVFERINLIKFAYIAFMGLIALILSTSTNFNANITSEIFGISSQFFKPISELSFCVFWAGFVFLLFSYFKNNDFHFLLAYMGLNVQFLFYNNIDLGYYEFASLVLIGFLAYKAYKIAFFDSVTNLANLKALRRYAQGLENFHLALIEVKNINEICHQNGLKTSEFIMHEFAKILKKALHARIFKDDKDYFIVIFENESVAFVQSKLQMLENFMQKYSFEFKEQNIKLEIKLCLSSKNENVEDSLKQAKLELRKQKD
>NZ_CP007766.1|WP_044598283.1|238954_240529_-|ABC-F-family-ATP-binding-cassette-domain-containing-protein
MVEVKNLTMRFANQLLFEDVNLKLNRGQRYGLIGANGAGKSTFLKILSGEIESSSGEIIFDEGLKIAVLGQDQFAFENYTIKDAVMCANKRLYDALKEKEKLYMSEEFTDEINDRLSELEIITAEEDPNYDCEIRCEKILSSLKIKDFDALMSTLQSADKFKVLLAQVLFLGADILFLDEPTNNLDLEAISWLENELLRHEGTLVVISHDRHFLNKVCTRILDVDFKQIRDFAGNYDDWYMASTLLAKQAELKRDKTLKEREELENFIRRFSANASKAKQATSRAKALEKLELEEIKTSSRRDPSIVFRASREIGNEVLELKGISKAYDKTLFENLELKVEKGDKIALIGANGVGKSTLAKIIASKLEPDSGHIHLGATIEMGYFAQDTTNLINEDLKLYEWLMSEKFKDLDEIRKCLGRMLFSGSDQEKKALSLSGGEKHRLMLSKLMLERGNFLLLDEPDNHLDLESIIALGEALYNFKGCAICISHDRELISAFANRIWLLEDGKLTDFKGSYDEFLGGLE
>NZ_CP007766.1|WP_044598282.1|238625_238958_-|hypothetical-protein
MNSYKIKYAAGFGHFTQNHKGFGPTIYVEESVDFQSEKDYFDYVEFYEKFSKSDDTYFHISFLEDRPLNSKELESRNAYRKLRDERCNKAREDFVKNNEIEAEYYPTHGD
>NZ_CP007766.1|WP_044598281.1|238229_238574_-|hypothetical-protein
MQVNHDNLSVKEYGYSQSSAYKNTQGANEDFMSLLSQNNSENLNEQSIKLDELFSKAMSQDQFSTGIFSSNMSNIYNYRFRGQTETSSQANTANLTEETQEPQKDLVKDLLNSL
>NZ_CP007766.1|WP_044598290.1|257095_258832_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MKKILLSTIAISSLLSASSITIAKNEYEKIIELSPDRNIPQNKALKEDLKTKKDYEKIQDAKKELEQEKEKLKEKFQEEDKTTQKEEGIVTNYKFVLTNEGTSFKKLGINEKDLHDLVSEFKKRKFSLQDLQDISNIIAYYFQVNGYPAATAYVPQQEFDGENIQINISLGTLGGYVIKNNTAIKDSFIKSKLNERIKGRIISTKLIEDSVYKVNEMYGVQTLAGLQAGAQVGQTDVIIEVEPDTKANVLMYADNYGIESSGEYRAGISMGFNSIFNMGDYYNFYLQSSNERQINYGASYTFFLGNLKITPSISQGSYSLGGDYEGLGFSGTSRNFGADFSYPIWINTISSFYVTSSFYHKILSDVTLDLLTFDKSSNVGSFGLEGLYRGIENNALSYSAKITIGKVNDDGVSAFGNTNKSGAKGFGWFRKLNTSLNNYYSFNEYITHTLSVNYQKVLGNFELDSSESSSLGGAYGVRAYDNGEGDGDNTIVANFGVRINIPNTNFYFTPFYDVGYAWYEKSGDRLEDDYFLDAVGLQILYNKPNEYYIKLDGARALHKYKYDDDHRMKLYLSGGLYF
>NZ_CP007766.1|WP_044598291.1|258808_259783_-|tRNA-lysidine(34)-synthetase-TilS
MINKKYINILKQNKNLLAFSHGSDSSALFFMLLKQDIEFDLALINYKTRLNSDLEEQSAKELAQKYNKKIYTKTANKIEKNFEANARALRYEFFDAICKKYKYQNLILAHNLNDKFEWFLMQFSKGAGMVELLGFKDIEQRKNYTIIRPLLNTSKNEILAFLKQENIKYFDDESNKDKKYFRNKIRINYANTFLNEFEKGVKKSFEYLEKDLKEEYIKEFNGIYITYKDESLIAKCFKYLGVLLSAKQRKEAMSKDGVISHKIAIVYIEDKALIFPYVRVEKIPKDFKELYRKAKLPKHLRAFCFMKNIDIKELYEFLKIQPTT
>NZ_CP007766.1|WP_044598292.1|259772_260159_-|type-II-toxin-antitoxin-system-death-on-curing-family-toxin
MKYLNFDEVILIHDLIIKETGGLIGFNKNSIGYLESALNQIKIDDFYPSFSDKLTHLMFACIKFHPFNDGNKRSSIFIGMHFLLINNKTIKDFAIKFEDIVVDVAEDKISKEELKQLIEKFLEIKNDK
>NZ_CP007766.1|WP_044598293.1|260286_261603_-|30S-ribosomal-protein-S12-methylthiotransferase-RimO
MPKLFLMSLGCNKNLVDSEIMLGRLSAYEICDEPSIADVLIVNTCGFIESAKQESINAILSLHEQRKKDSLLVVTGCLMQRYREELMKELPEVDLFSGVGDYEKIDEMILKKTSLFSNSTYLQDKNTKRIITGSNYHAFIKIAEGCNQKCSFCAIPTFKGKLKSRNLTSIVDEVKELVNKGYKDFSFIAQDTSSYLFDQGQKDGLIKLIKAIESIQGVKAARILYLYPTSISKELIETIIASKVFVNYFDMPLQHISDNMLKIMKRGANKAKILELLNLMKKAPNSFLRTGFIVGHPGESDDDFNELCAFLKEFEFDRISIFAYSKEEDTAAFNMEQIPSKIIHARLKIIEKIVDECIEKSFEKEVGKKVLAFCEGQSSEGEFFIGAKDMRWDKNIDGEILINESECGDLIMGELYECEINQNLDKKLIAKALRKEII
>NZ_CP007766.1|WP_044598294.1|261679_262780_+|peptide-chain-release-factor-2
MDNYEYSELLKTLENKVENIKNIIKPQEIIKRLKEIEDLENSPSFWNDVKQAGIIGKEKTKISNLLKNYENAYNEVHNASELFDLANSENDLETIEALFNDASKLEDVIVNLEISMLLSGENDNKNAIVSIHPGAGGTESNDWASMLYRMYLRFCEREGFKVETLDFQEGDEAGIKNVSFLVKGDNAYGYLKAENGIHRLIRTSPFDSAGRRHTSFSSVMVSPELDDDIEIEIEEKDIRIDYYRASGAGGQHVNKTESAVRITHMPSGIVVQCQNDRSQHKNKATAFKMLKSRLYELELMKQQDEANSSEKSEIGWGHQIRSYVLFPFQQVKDNRSNKAFSQVDSILDGDIKKIIEGVLIAQKAKG
>NZ_CP007766.1|WP_044598295.1|262783_263623_+|universal-stress-protein
MEQKILVCIDVLEPCKESVDYGVYLAKKLNLTLMFLYTIEPNFTNAELACSFGIGASGCVIEDLVEEQTQKNENLFKKGKRILNEFCAYAKDQGVKECFSVQRDGDLEEVLKDYNGKIRLAIAGLKGGGRKNKIGIHTEELVRALNVPILLVNSSFKEINSVMMAYDGSNLAKKAIEQAIQKPIFKEAKRYVVNVSKDEKNSCELLEHVSKLFKNVNLEVETKHLNGEVSQALFDFWEQNDVDLLIMGAYSHHWLKSILFGSLTNEILTKAKKPLLLIR
>NZ_CP007766.1|WP_147575108.1|263815_264316_+|two-pore-domain-potassium-channel-family-protein
MVAMALMVFLLISIWAAFSNKINVKEKFLMILYAYVLIWFAYGNLYYFSCDVDNYNRLLIVSQKHKDESLEKLQEIIIQAQYQTPIKGIENFWTLNENLKPQIQNRLKGLVDCYYFSGVTMLTIGFGDVTPVSSLLRLFSVFQGFLGQVIVVIAMGLWINQSGKQK
>NZ_CP007766.1|WP_044598297.1|264339_265383_-|putative-sulfate-exporter-family-transporter
MHTKHKNIYKGRKFEGFLLLFVLAFCAFAISQLSFFKNLGISALIIAVCLGALIGNFANQNASLLKKTGVLNIATKEILRLGIILYGFRITFNDIQKAGLEGIILAFIIVFSTFFIGLILGKLFKLDLKESILISSGSSICGAAAVMASESVVKGGSSRVGVAICTVVVFGTIGMFLYPLAWNLGLFDFFNIHQMGYFMGATLHEVAHAVAAGEAIQAGDGAVIEKMIRVLMLVPFLIFLAIFSLKFLSKEKEKVSIKNNIPYFALLFLLASVISSLDILNTPFSINYIKSNIETIDTLLLSISMVALGVNIHKDVIKNAGLKPFLMAFLLFIWLISSGIILTKIFM
>NZ_CP007766.1|WP_044598298.1|265484_266351_+|transcriptional-regulator,-LysR-family
MTFKQLRYFQALSKNLNLRSCAKELNITQSALSLAIFELEKSLNTKLFDRNAKFLSLNEKGKMFLKQITPLMIEFQRIENLMQNDENYQLSMKVSQNVGTFLLAGVLNKKDEKITLELSLDNSKNIIKNILDKEIDLGIIEGICKDKDLEKIKICDDELIVVSNKKLDKEYFIDELKDYQWLSREKGSGAKEVFVNALPKNIKLNLVYELNSTAMIKELIKKGNFLAVLPKFSVKEELENKKLFQVKLKNFKISRELFIIYHKNKEPNEKFLNFCDFLIKQIQKEILA
>NZ_CP007766.1|WP_044598299.1|266342_267542_-|UDP-N-acetylmuramoyl-L-alanine--D-glutamate-ligase
MKISLFGYGKTTKAFAQRFKECDIYDDKFTNISKDEFENTLLPPSEFDPLKSDLEIPSPGFPNDHFLIQQAKNLSSEYDFFYDGMPKSVWISGTNGKTTTTQMTYHLLKHINAQMGANIGIPLAQMDANANLWILESSSFSLFYTKIAKPEIYALLPITPDHLSWHKSFKAYEQAKLSVLDRMNENDVAILPKKYENYPTHAYIISYENEQDLAKKMQINIDKIHFKTPFLLDALIALSIEKIILDRCSYELLNEFKIEKDKLEEIYDDKKRLWVNDTKATNLDATLAALKRYKDKKIHLIIGGDDKGVDLSELFTYMKNLNIELYAIGKSTNKMLDYAKNVNLKAHYCEFLPKAVEEINLNLKENEVALLSPACASLDQFDSYAHRGEVFKKSIKQLS

Crispr_ID: NZ_CP007766_3

• CRISPR_ID: NZ_CP007766_3
• CRISPR_location: 1013079-1013197
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP007766_3

Consensus_repeat	Method
TTAGTTACATTGCTTACATCCCAATTGTTTAAATTTTGATTAAA	CRISPRCasFinder

spacers of NZ_CP007766_3

>3.1|1013123|31|NZ_CP007766|CRISPRCasFinder
TTTTCCAGCACCCTTAAACATCTCTTGCATG

CRISPR arrays and Neighbor proteins around NZ_CP007766_3

CRISPR arrays

The CRISPR arrays of NZ_CP007766_3

>merge|NZ_CP007766|3|1013079-1013197|CRISPRCasFinder
TTAGTTACATTGCTTACATCCCAATTGTTTAAATTTTGATTAAATTTTCCAGCACCCTTAAACATCTCTTGCATGTTAGTTACATTACTTACATCCCAATTGTTTAAATTTTGATTAAA

>NZ_CP007766|3|3|1013079-1013197|CRISPRCasFinder
TTAGTTACATTGCTTACATCCCAATTGTTTAAATTTTGATTAAA	TTTTCCAGCACCCTTAAACATCTCTTGCATG
TTAGTTACATTACTTACATCCCAATTGTTTAAATTTTGATTAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007766.1|WP_044598844.1|1007414_1009142_+|type-VI-secretion-system-baseplate-subunit-TssF	unknown	unknown	gnl|CDD|274541
NZ_CP007766.1|WP_044598845.1|1009138_1010050_+|type-VI-secretion-protein	unknown	unknown	gnl|CDD|377755
NZ_CP007766.1|WP_044598838.1|1000986_1001757_-|DotU-family-type-IV/VI-secretion-system-protein	unknown	unknown	gnl|CDD|378275
NZ_CP007766.1|WP_044598840.1|1003181_1003622_-|type-VI-secretion-system-lipoprotein-TssJ	unknown	unknown	gnl|CDD|378947
NZ_CP007766.1|WP_044598839.1|1001765_1003166_-|type-VI-secretion-system-baseplate-subunit-TssK	unknown	unknown	gnl|CDD|274536
NZ_CP007766.1|WP_044598853.1|1023301_1024279_-|agmatine-deiminase	unknown	unknown	gnl|CDD|225505
NZ_CP007766.1|WP_044598843.1|1007020_1007413_+|type-VI-secretion-system-lysozyme-like-protein	unknown	unknown	gnl|CDD|274540
NZ_CP007766.1|WP_039626294.1|1005064_1005550_+|type-VI-secretion-system-contractile-sheath-small-subunit	unknown	unknown	gnl|CDD|377529
NZ_CP007766.1|WP_044598848.1|1015645_1016896_-|MFS-transporter	unknown	unknown	gnl|CDD|340883
NZ_CP007766.1|WP_084083589.1|1020776_1020947_+|hypothetical-protein	unknown	unknown	gnl|CDD|378415
NZ_CP007766.1|WP_044598842.1|1005562_1007017_+|type-VI-secretion-system-contractile-sheath-large-subunit	unknown	unknown	gnl|CDD|274538
NZ_CP007766.1|WP_044598851.1|1021549_1022422_-|N-carbamoylputrescine-amidohydrolase	unknown	unknown	gnl|CDD|143597
NZ_CP007766.1|WP_044598852.1|1022390_1023305_-|cation-transporter	unknown	unknown	gnl|CDD|223131
NZ_CP007766.1|WP_141045880.1|1003785_1004991_+|nucleobase:cation-symporter	unknown	unknown	gnl|CDD|274543
NZ_CP007766.1|WP_044598849.1|1017010_1020604_-|DNA-polymerase-III-subunit-alpha	unknown	unknown	gnl|CDD|235554
NZ_CP007766.1|WP_049984584.1|1024335_1024623_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP007766.1|WP_044598850.1|1020970_1021537_-|4-methyl-5(beta-hydroxyethyl)-thiazole-monophosphate-synthesis-protein	unknown	unknown	gnl|CDD|213612
NZ_CP007766.1|WP_044598846.1|1012415_1012889_-|GNAT-family-N-acetyltransferase	unknown	unknown	gnl|CDD|225064
NZ_CP007766.1|WP_044598847.1|1013639_1015649_-|CocE/NonD-family-hydrolase	unknown	unknown	gnl|CDD|225487
NZ_CP007766.1|WP_044598854.1|1024622_1025222_-|MBL-fold-metallo-hydrolase	unknown	unknown	gnl|CDD|293792

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP007766.1|WP_044598844.1|1007414_1009142_+|type-VI-secretion-system-baseplate-subunit-TssF	gnl|CDD|274541	TIGR03359, VI_chp_6, type VI secretion protein, VC_A0110 family. This protein family is associated with type VI secretion in a number of pathogenic bacteria. Mutation is associated with impaired virulence, such as impaired infection of plants by Rhizobium leguminosarum.	2.65115e-133
NZ_CP007766.1|WP_044598845.1|1009138_1010050_+|type-VI-secretion-protein	gnl|CDD|377755	pfam06996, T6SS_TssG, Type VI secretion, TssG. This is a family of Gram-negative bacterial proteins that form part of the type VI pathogenicity secretion system (T6SS), including TssG. TssG is homologs to phage tail proteins and is required for proper assembly of the Hcp tube in bacteria.One other member in this family, SciB (Q93IT4) from Salmonella enterica, is thought to be involved in virulence.	4.58828e-35
NZ_CP007766.1|WP_044598838.1|1000986_1001757_-|DotU-family-type-IV/VI-secretion-system-protein	gnl|CDD|378275	pfam09850, DotU, Type VI secretion system protein DotU. DotU is a family of Gram-negative bacterial proteins that form part of the membrane-joining complex of the type VI secretion system. DotU binds tightly to IcmF and together they are tethered to the inner membrane at one end and the peptidoglycan layer at the other; they interact with Lip1 which then tethers the peptidoglycan layer to the outer membrane.	1.19558e-39
NZ_CP007766.1|WP_044598840.1|1003181_1003622_-|type-VI-secretion-system-lipoprotein-TssJ	gnl|CDD|378947	pfam12790, T6SS-SciN, Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113. One of the virulence mechanisms of E coli is the production of toxins which it produces from dedicated machineries called secretion systems. Seven secretion systems have been described, which assemble from 3 to up to more than 20 subunits. These secretion systems derive from or have co-evolved with bacterial organelles such as ABC transporters (type I), type IV pili (type 2), flagella (type 3), or conjugative machines (type IV). The type VI secretion system (T6SS) is present in most pathogens that have contact with animals, plants, or humans. SciN is a lipoprotein tethered to the outer membrane and expressed in the periplasm of E coli and is essential for T6S-dependent secretion of the Hcp-like SciD protein and for biofilm formation.	3.02034e-12
NZ_CP007766.1|WP_044598839.1|1001765_1003166_-|type-VI-secretion-system-baseplate-subunit-TssK	gnl|CDD|274536	TIGR03353, VI_chp_4, type VI secretion protein, VC_A0114 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	2.68467e-115
NZ_CP007766.1|WP_044598853.1|1023301_1024279_-|agmatine-deiminase	gnl|CDD|225505	COG2957, COG2957, Peptidylarginine deiminase and related enzymes [Amino acid transport and metabolism].	1.93438e-151
NZ_CP007766.1|WP_044598843.1|1007020_1007413_+|type-VI-secretion-system-lysozyme-like-protein	gnl|CDD|274540	TIGR03357, hypothetical_protein_Atu4338, type VI secretion system lysozyme-like protein. The description for Pfam family pfam04965 cites acidic lysozyme activity for some phage-encoded members. This family represents a different subgroup of the proteins from pfam04965, where all members are associated with bacterial type VI secretion system genomic contexts.	5.04463e-08
NZ_CP007766.1|WP_039626294.1|1005064_1005550_+|type-VI-secretion-system-contractile-sheath-small-subunit	gnl|CDD|377529	pfam05591, T6SS_VipA, Type VI secretion system, VipA, VC_A0107 or Hcp2. VipA is a family of Gram-negative bacterial proteins that form part of the type VI pathogenic secretion system. Members have been variously defined as VC_A0107 family, Hcp2 and VipA, for ClpV-interacting proteins. VipB and VipA proteins interact very closely to form the shaft of the pathogenic penetrating needle system.	2.36151e-61
NZ_CP007766.1|WP_044598848.1|1015645_1016896_-|MFS-transporter	gnl|CDD|340883	cd17325, MFS_MdtG_SLC18_like, bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters. This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	5.23586e-22
NZ_CP007766.1|WP_084083589.1|1020776_1020947_+|hypothetical-protein	gnl|CDD|378415	pfam10262, Rdx, Rdx family. This entry is an approximately 100 residue region of selenoprotein-T, conserved from plants to humans. The protein binds to UDP-glucose:glycoprotein glucosyltransferase (UGTR), the endoplasmic reticulum (ER)-resident protein, which is known to be involved in the quality control of protein folding. Selenium (Se) plays an essential role in cell survival and most of the effects of Se are probably mediated by selenoproteins, including selenoprotein T. However, despite its binding to UGTR and that its mRNA is up-regulated in extended asphyxia, the function of the protein and hence of this region of it is unknown. Selenoprotein W contains selenium as selenocysteine in the primary protein structure and levels of this selenoprotein are affected by selenium.	8.02864e-05
NZ_CP007766.1|WP_044598842.1|1005562_1007017_+|type-VI-secretion-system-contractile-sheath-large-subunit	gnl|CDD|274538	TIGR03355, VI_chp_2, type VI secretion protein, EvpB/VC_A0108 family. Work by Mougous, et al. (2006), describes IAHP-related loci as a type VI secretion system (). This protein family is associated with type VI secretion loci, although not treated explicitly by Mougous, et al. [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	0
NZ_CP007766.1|WP_044598851.1|1021549_1022422_-|N-carbamoylputrescine-amidohydrolase	gnl|CDD|143597	cd07573, CPA, N-carbamoylputrescine amidohydrolase (CPA) (class 11 nitrilases). CPA (EC 3.5.1.53, also known as N-carbamoylputrescine amidase and carbamoylputrescine hydrolase) converts N-carbamoylputrescine to putrescine, a step in polyamine biosynthesis in plants and bacteria. This subgroup includes Arabidopsis thaliana CPA, also known as nitrilase-like 1 (NLP1), and Pseudomonas aeruginosa AguB. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 11. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer; P. aeruginosa AugB is a homohexamer, Arabidopsis thaliana NLP1 is a homooctomer.	1.19548e-156
NZ_CP007766.1|WP_044598852.1|1022390_1023305_-|cation-transporter	gnl|CDD|223131	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism].	7.46494e-81
NZ_CP007766.1|WP_141045880.1|1003785_1004991_+|nucleobase:cation-symporter	gnl|CDD|274543	TIGR03362, VI_chp_7, type VI secretion-associated protein, VC_A0119 family. This protein family is one of two related families in type VI secretion systems that contain an ImpA-related N-terminal domain (pfam06812). [Protein fate, Protein and peptide secretion and trafficking, Cellular processes, Pathogenesis].	1.6225e-07
NZ_CP007766.1|WP_044598849.1|1017010_1020604_-|DNA-polymerase-III-subunit-alpha	gnl|CDD|235554	PRK05673, dnaE, DNA polymerase III subunit alpha; Validated.	0
NZ_CP007766.1|WP_044598850.1|1020970_1021537_-|4-methyl-5(beta-hydroxyethyl)-thiazole-monophosphate-synthesis-protein	gnl|CDD|213612	TIGR01383, transcriptional_regulator_related_protein, DJ-1 family protein. This model represents the DJ-1 clade of the so-called ThiJ/PfpI family of proteins. PfpI, represented by a distinct model, is a putative intracellular cysteine protease. DJ-1 is described as an oncogene that acts cooperatively with H-Ras. Many members of the DJ-1 clade are annotated (apparently incorrectly) as ThiJ, a protein of thiamine biosynthesis. However, published reports of ThiJ activity and identification of a ThiJ/ThiD bifunctional protein describe an unrelated locus mapping near ThiM, rather than the DJ-1 homolog of E. coli. The ThiJ designation for this family may be spurious; the cited paper refers to a locus near thiD and thiM in E. coli, unlike the gene represented here. Current public annotation reflects ThiJ/ThiD bifunctional activity, apparently a property of ThiD and not of this locus. [Unknown function, General].	7.78432e-60
NZ_CP007766.1|WP_044598846.1|1012415_1012889_-|GNAT-family-N-acetyltransferase	gnl|CDD|225064	COG2153, ElaA, Predicted acyltransferase [General function prediction only].	8.55647e-48
NZ_CP007766.1|WP_044598847.1|1013639_1015649_-|CocE/NonD-family-hydrolase	gnl|CDD|225487	COG2936, COG2936, Predicted acyl esterases [General function prediction only].	1.09359e-112
NZ_CP007766.1|WP_044598854.1|1024622_1025222_-|MBL-fold-metallo-hydrolase	gnl|CDD|293792	cd06262, metallo-hydrolase-like_MBL-fold, mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain. Members of the MBL-fold metallohydrolase superfamily are mainly hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) for which this fold was named perform only a small fraction of the activities included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases which can catalyze the hydrolysis of a wide range of beta-lactam antibiotics, hydroxyacylglutathione hydrolases (also called glyoxalase II) which hydrolyze S-d-lactoylglutathione to d-lactate in the second step of the glycoxlase system, AHL lactonases which catalyze the hydrolysis and opening of the homoserine lactone rings of acyl homoserine lactones (AHLs), persulfide dioxygenase which catalyze the oxidation of glutathione persulfide to glutathione and persulfite in the mitochondria, flavodiiron proteins which catalyze the reduction of oxygen and/or nitric oxide to water or nitrous oxide respectively, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J which has both 5'-3' exoribonucleolytic and endonucleolytic activity and ribonuclease Z which catalyzes the endonucleolytic removal of the 3' extension of the majority of tRNA precursors, cyclic nucleotide phosphodiesterases which decompose cyclic adenosine and guanosine 3', 5'-monophosphate (cAMP and cGMP) respectively, insecticide hydrolases, and proteins required for natural transformation competence. The diversity of biological roles is reflected in variations in the active site metallo-chemistry, for example classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, human persulfide dioxygenase ETHE1 is a mono-iron binding member of the superfamily; Arabidopsis thaliana hydroxyacylglutathione hydrolases incorporates iron, manganese, and zinc in its dinuclear metal binding site, and flavodiiron proteins contains a diiron site.	8.80372e-62

Protein sequences

>NZ_CP007766.1|WP_044598846.1|1012415_1012889_-|GNAT-family-N-acetyltransferase
MRLIVKKFIELDTKEVYKICKLRQDVFIVEQRCIYSDLDDKDLQCLHVFYEDNANEIIGYCRIVPKGINFDTISIGRIIVNQKYRNQGIAKKLLLEVFEIIKNNYKEFKVKISAQNRLKGFYKSLGFEEISDVYDEDGILHINMLIDLKNANNFHNS
>NZ_CP007766.1|WP_044598845.1|1009138_1010050_+|type-VI-secretion-protein
MNNANSYTFYKLLKKLLKDHPKEDIFLRVNNALMHPNKEIEYVKFNKNISDFPIEIMINFMGLQGNTSQLPSYILDKLSRNEDGGDGWSLFFDFFNHYLLWIFFEITTLNNYPKSFDINFNDRISKILFSMLGINDTKIAKRYLPFAPLLLSLRRPKSYIERILQITFNLQNQLNIIENIPHQIYIRHIQLNKLGSKNHILGKNLILGKKFLSYQNKIAIYIKDIHYDEALKYFPNAEKYKELKESILFLTNNEFCVDLYLKIIFNKRMLFKLGDYSHSKLGWGKILGKKIKNYEIIHIKLHE
>NZ_CP007766.1|WP_044598844.1|1007414_1009142_+|type-VI-secretion-system-baseplate-subunit-TssF
MTQDDIHYYQKEIAYLNHARKIFIDKFPKLTPFLSYDSKDPDIERIIENLAILTSKIHQELDQNIPYIAESLINILSPNYTNILPSMCMQEFKFSENSKLNRLIIPKNSTVKSVSIEKCECEFKTVYDVYLYPLNIENVFLGSERQYHTLDIQLRVSREDLNIEHLGLDKLSIYLGDDVYTSSTLLFYMHQYLEEIKVISHDTKEEFKINTHNIKTMGLKPNESCLFYNDLGFESFSLLREYFFLPEKFNFISIQGLDVLHECKGKLISIFFKFNKTLPKNCIIKNELFSLSTTPIINIFEKTAEPIINNHSKNGYRIFIDRTNLNAYDIVQIKQVKAHNSDSGSRILKNYKNFERFEFMQNKIQDFYYITNKSNSKQDNFKEISFFSSNNTNETITIDVLCCNKNLPTHLKIGDINLIPFYKDAITKNITIPTSIKQVKTNGNLLWKLVSILSFSYQTLLTKTSFFQVLESYSFPDDKTSEVVCQLLTSSIIDIQSKPSYLIDEHITKKGTMSIISIDDSKFYSLGEVYKLGLIISEFLSSFVSINSFCELKIKCINSKVTIHYPFKKGIKPIL
>NZ_CP007766.1|WP_044598843.1|1007020_1007413_+|type-VI-secretion-system-lysozyme-like-protein
MSLLDKIIHSLDEQYQNIPFYQNEFQEIKNNIQVLLNAKLDDCLSVEDFGLSSMENLNLSSTELCLNMAKEIHKLISKYEKRIIINSITYNDSLKPWQLSFLLKCVFCNDNFKEFAIEIIFKNNRYCEVI
>NZ_CP007766.1|WP_044598842.1|1005562_1007017_+|type-VI-secretion-system-contractile-sheath-large-subunit
MSKDKVIDTPIIESIMEKSKYARNDESYSIAKRGVAEFISAIVESDNIEDKINKFALDEMIAHIDDLLSKQMDEILHNEEFQKLESTWRGLFFLVERTDFNENIKINLFDITKEEVLEDFENNPDITQSVVYKNIYSSEYGQFGGEPVGAIIGDYQLSTTSPDMTFLNKMSSIAAMSHSPFLTSLGPKFFGLENYSELANIQDLQSLLEGPQYTRWRTFRENEDSKYTGLMVTRFLTRSPYDSEENPIKSFNYKENVHASHNHLLWGNSAYAFATRLTESFAKYRWCGSIIGPKSGGSVKDLPTYFYENFGNLKAKIPTEVLITDRREYELAENGFITLTLRRDTNNAAFFSANSALKPKIFPNTPEGKEAETNYRLGTQLPYVFLISRLAHYLKVLQREEIGSWKERSDIENGLNEWVRQYISDQENPPAEVRSRRPFRGAQVKVDNIPGEPGWYKIGLSVRPHFKYMGGNFELSLVGKLDKE
>NZ_CP007766.1|WP_039626294.1|1005064_1005550_+|type-VI-secretion-system-contractile-sheath-small-subunit
MSDGSSAPKERINITYKAKTNGQNAEIELPLKLMIMANLTGKNEQNLEDREIVSINKINFNQVMQKLDIKTQFNVKNTLGGGAEELDINLKISSMKDFSPDNIVQQVPELNKLMRLREALMALKGPMGNIPNFRKAVLDALKNEKTKEQLLLEIKKENNEE
>NZ_CP007766.1|WP_141045880.1|1003785_1004991_+|nucleobase:cation-symporter
MTKYKTLNHEKIQWDKVYEYSLDILQNNSMDMKIFAYFSLSCLALNNEECFKIFLEIIIFTEKLFREKPENISKTSSILLNQKKKYKQIVENFINEFNKNSPKCSQVTAKSLNEYFEKLHEILNCNFAKLNIKEEITQTKQSPLKSPVTQVNIDIKNTKLSNLSDREYRTLLNNLAIELLENNIENTNAYSLFAEAAWGRLKTLPPHSDFVTKVRYPDRNLIKLLLDKNTNELDQIKCFINNLSLNPFWIEGFKLFCDFLHHHQKEHSLKILNLLTCNFILKFKDITKLRFDNGELMCKEDTFNYFVKQNQETNKKTHTTSDKNKKVEQLLIEINNENYNNSLFCNINSLIAMAQVFETNNMKNNAKIIYLQLVELMEKTLLKDYLSDEYNYAKNKTNKKI
>NZ_CP007766.1|WP_044598840.1|1003181_1003622_-|type-VI-secretion-system-lipoprotein-TssJ
MRKIFVMLLMGLFLSSCSSVVSVKIDNIKNSNLNSRNDDVPLTVIVYQLKDVNKFIKASDLELINREDAILGRDKIDSIRLQIAPKDNIIAFKVIDEEVPYIGILVLFANNTKKVTKIWAKTDDANGFGTKKTLKFEITKDGVRHI
>NZ_CP007766.1|WP_044598839.1|1001765_1003166_-|type-VI-secretion-system-baseplate-subunit-TssK
MADKLKVAWFNGLNIDKIHFEQQERYFERNINLKTISTFNNLYGIIDLEFSNEMLMQGKIALKRISGIAKDGSIFNAPEQDELPEPLEVNYDSLVNSIIVIKIPMGLSSIADISLHNNIPNSKYISLRSVVASRIYDDNTNDVFKHTDLEDEYENDNITFSQEKISITLASLRLKLGFLGSKTPDELEIPIAKIKNIDLNKKIELDESFIPTCLDLNKSSYIKSFLEEISHSIKQHKEILTEVFKGIDQTKNTLDFSTYLSLNLLKKWYFIFSYIINKDKIHPENLYEKLVDFQGDLSAFGTESSFSDFIVYNHDDLTNTFLPLTNQLRVLFAKITSPKYTMAQVIDNNNGFYDLLFDNPTVIEEGELFLAISADVNHEYLLYNFKTQSKIHTQSRIKSIVTTQLRGINIEQISNIPSSIPYLNGYIYYKLDKKDELFKYFKGENVISLYLTTNIKNPDIKMWAVF
>NZ_CP007766.1|WP_044598838.1|1000986_1001757_-|DotU-family-type-IV/VI-secretion-system-protein
MQKESHFKEGSLLLESDLKGLEINKVVDNCLEILLLVYRLSKVHSLDAAYIENLKEKLVNEILVWSSRLSTFKEYDEKDIIKLRYCLCVFVDESLMKNDLFINSSWANHTLTVRLFDETLGGDNFYDIALSWLSNPSKNKDFLEFIYVCLILGYRGKYSHEKDVEEKIIYFCNNIASALTPLINLTDETAFDKAYNGANREKFWQYFQRRFMKFALVVIPIGCILGFFIFAIFDLQTHNIKIDSNISSLIKNIEKI
>NZ_CP007766.1|WP_044598847.1|1013639_1015649_-|CocE/NonD-family-hydrolase
MKEIINNFKNEVKVIENEWIILKDGTKLSSRIWLPQVKEKVPAILEYIPYRKNDGTRGRDEPMHGYFSGNGYAVVRVDIRGSGESDGLLEDEYLKQEQDDALEVIEWIANQEWCNGNIGMMGKSWGGFNSLQVAARRPKNLKAIIVVGFTDDRYNEDIHYKGGCLLNDNFWWGNIMLAYQSRFVDPKIDSNGREKWLNRLENMPLWPALWLEHTLKDDYWKHGSVGENYDDIQVPVFALDGWADSYTNTVFTLMQGLKVPKKAIIGPWAHVYPHDGAPLPAIGFLQEALKWWDKWLKNEENDVLKVPMIQAYIENSMKPSANIKSVNGRFVGIDNFEKNIKYKNYCLNPYKLTQNKSNDIVKINTPLNHGLLSGEWMGAGVLGESPCDQRLDDGMAVIFESDILENDLDVLGFPLLSVKISSDQEKAMLFAQLSEVREDGFVKRVSYGVLNLALSDDKEKFIGLSDNKFINKQLKLDACGYKFSKGSKIRLSLANSFWPMFWPMPKIATLTLELNECELALPCFDGKDSDMINMQAQSAALTPITLLKEGRVDRNISYDILSDTWTCVTDGIGGVFGEGVYKFDEVDVLVEHNLKRELSLQNENPLSAKYSIIQKMKIGRQGCMMDADIVLTQTSDLEYFYIKGDMKVKENDILIFEKEYNYKTKRHSL
>NZ_CP007766.1|WP_044598848.1|1015645_1016896_-|MFS-transporter
MELENNESLRKNFFTLILLSFCGSIIYGLPYFRKYYYDDYMSLYNLNNFEMGLLGSAYGLLGLFSYALGGYLADRFAPKKLLIFSLVATGLGGLLHLYFTSLNALLVIYGVWGITSLLTFWPSLMKIVRSLANSKEQARAYGIFEGGRGVVGAAHLAIATSIFGYFQTKALAAQGIEMVIIFYSVAPIVSAILLFFLLKDNIQDESEKLKLKDLAFLLKNSALWLVVAITFCTYFFNMSFYYFTPYASNIIGTSAVFAAILTVLAQYIRPVSSTIGGFIADGYGKAKIMMIGFILMGIGVVFLMLSSNLSGFLQMSILTSACVVIYVAMYSNFGIYYSLLSEGKIPMHLTGMAIGIVSTFGYLPEIFAPLLAGDLLDRYPGVKGYHIYFSIMIVMAILGVIFCMVWIKKYNKKDVK
>NZ_CP007766.1|WP_044598849.1|1017010_1020604_-|DNA-polymerase-III-subunit-alpha
MSQFTHLHLHTEYSLLDGANKLKELAKTLKTQGATSVAMTDHGNMFGAIDFYKTMRAEGIKPIIGLEAYLHNHDDLSDKSSRQRFHICLFAKNEIGYKNLMYLSSQSYIHGLYYYPRINKKLLEAHSEGLICSSACLQGEVNWHLNTQNEKNIKFGAKGYEGAKEAALWYKKVFGDDFYLEIMRHGIDDQKFIDDSIIKLAKELDIKIIATNDTHYTFKERAAAHEVFMCIAMGVKLDDPGRLRHEVHEFYVKTPEQMNELFADIPEAIENTQELANKCNLELKLGDPTPPNFKFTREYAKKYNLNLVEENKEFSFDNDDIVFEYLCKKGLEERLQFIDESKHQEYKDRLDLEIDIIKNMKFSGYMLIVHDFIAAAKEKDIPVGPGRGSAAGSLVSYCLKITDLDPIPYNLLFERFLNPERVSMPDIDVDFCQDRRGEVIDYVIDKYGAEKVAQVITFGKLLAKGVIRDVARVCDMSIPDADALAKLVPEELKITLEKAYEQEPKIAEFIQHHPKGHQVWEFAKALEGLNRNAGMHAAGVVISNEALWNKAPLFRQSKNDERHLVTQYSKEYLEDVDLIKFDFLGLKTLTVINNAIKLVKKRYNKDIIWEKINVNDPKVYKTIQSGNTLGIFQIESGGMQNLNARLKPERFEDLIAVLALYRPGPLDSGMVDDFIDIKHGRKAATYAFEDLKPILENTYGVIVYQEQVMQIVQKIGGFSLGGADNVRRAMGKKKREILDNLKAEYLEGAKKQGYDEKKADDLFELILKFAEYGFNKSHSAAYALITFQTAYLKTYYPSEFMAALLTSEESNVDKVAKYIEEMKRMNIKLLPPSINKAQREFSATKLEDGSEAIVYGLGAIKSVGIPAIENIMAIRKENGFNDFDDFISSIDPTKINKKTIENLAKSGAFDEFGYTRKCLIENIELISETSRKIAEVKRNASISLFGEEEIAGDIKVKIHDNKIEFDIMEKLGYEKEILGIYVSGHPLDKFSSQMEGIEYFKSMDFDELKGNGEILIIGKIEDFKSMMSKNGKRYAKAVILDLYSSFDIVIFESQVEKVEGLYKEDKDQAFAFMLNYKNNDSDLSFNLNEIYTLDEIKEKEIKAINKKKNFTKKEENNNFTQEPMKFEENIIELDINKLNKDMVYEIYSLANSKHNPKDANNKKLILKVIDMGSCLLYHTGFVISQESFDEISQKCKN
>NZ_CP007766.1|WP_084083589.1|1020776_1020947_+|hypothetical-protein
MQNEFKDAQISTIEKGGGHFIVEVDGKIIYSKKDLFNCEVDRFPHEGEITKLIKQI
>NZ_CP007766.1|WP_044598850.1|1020970_1021537_-|4-methyl-5(beta-hydroxyethyl)-thiazole-monophosphate-synthesis-protein
MKKILVPLAKGFEEAEFIGIADVLKRAGEASGNLEVIIASLDDELLVQGANGICIRADMSLASIDQENLDAIALAGGFEGMMNLKNNQAIIKIIQDLHAKKKIVAAICASPMVLAKAGVINGEFSCYPGCEVGIEGVRVNKAVVVNENVITAAGPATAILFGLELAKHLCSEEIYQKLYEGMLVPLTK
>NZ_CP007766.1|WP_044598851.1|1021549_1022422_-|N-carbamoylputrescine-amidohydrolase
MKLALIQQEFKQNKEKTIEKTCELIKQAAKENAELVCLQELHQTQYFCQSENTDFFDLANDYEEDVKFWSNVAKENKVVLVTSLFEKRSAGLYHNTSVVFEKDGFIAGKYRKMHIPDDPCFYEKFYFTPGDLGFEPIQTSVGKLGVLICWDQWYPEAARLMALKGAQILIYPTAIGWFDKDEKEEKQRQLEAWIGVQRGHAIANGLPVVAINRVGFEKDESGVEEGIRFWGNSFVFGAQGEELFRADDKQELCKIIEIDMQRCENVRRWWPFLRDRRIEYFHELNKRFID
>NZ_CP007766.1|WP_044598852.1|1022390_1023305_-|cation-transporter
MSLQKSATIIASICAIFLALVKFIVGLSSGSVAVLASAIDSLVDFAVSLLNFFALKKSSQGSSKEYNFGLSKIEALMGLFEGFVISGIGVYIFYESVLKIHNQESVEKLDLGIYVMAFAMIVTLFLVIFLNYVAKKTKNLIIKADSLHYKIDFLTNALTLLALVIIAFTNYHFIDGLFGIAISLYTIFSAFKIIKESSKILLDVAIDKEQVEMIKQIINANEEVKSFHHLKTRKSPDILYVSVHLVFEPTISLLKAHKIGDEIEDSIREYFKDDFWNIHIHLDPYDDSEEERSKNEISTHSARI
>NZ_CP007766.1|WP_044598853.1|1023301_1024279_-|agmatine-deiminase
MRKSIAEWEKQELLLLSLPHKNSDWKPYLEDILQSYEEFIKAVANFQKVLLIAPSEDDFKKFKHIKNVDFFKCDTNDTWIRDFGAIDVRENDKLIGLDFIFNAWGNKFQSTLDNAVNSKLFTQKLYSKLEKIDFILEGGSVDFNGQGVMLTTSACLLNENRNSHLSKEQIEAKLKEIFGLEQIIWLNYGYIKGDDTDHHIDTLARFINEKTIAYCVCKDENDEHYKPLKAMEEELNKTGFELLELPLPAPIYYEGKRLGATYANFVFVNDALIVPTYNDKNDALVLENLQKVCKDRKVVGVDARVFLRQNGSLHCSCQNHYAGLR
>NZ_CP007766.1|WP_049984584.1|1024335_1024623_-|hypothetical-protein
MDKILYFLSFLLILSALLSFFKPKNTEIKKKFFHKCPCFKAVENGLMSRICIYAGSFGFMYSVLYIGFGVYDKRLFIILFVSFAIWYFAWILKKE
>NZ_CP007766.1|WP_044598854.1|1024622_1025222_-|MBL-fold-metallo-hydrolase
MRILKQACGMYETNCYIIDHNNKQIIIDPGENAYEFIKENANKPLAILNTHGHYDHVYDNARVKKAYEIPIYIHKDDAFMLKDPFNYGFEHSDADVLIENENEFSIDVFKFKFHHFPGHTPGCCMIELVDEDVFFSGDFLFYRSIGRWDFPYSDAEKMKESLLKVLAYEKDFKLFPGHGEESSLKEEQKAIPAWLRYFN

Crispr_ID: NZ_CP007766_4

• CRISPR_ID: NZ_CP007766_4
• CRISPR_location: 1067426-1067552
• CRISPR_type: Orphan
• Repeat_type: NA
• Spacer_info: 1 spacers

Consensus repeat of NZ_CP007766_4

Consensus_repeat	Method
TTGGTGTTGGAGGATTTATAGGAATTGCTGAAAA	CRISPRCasFinder

spacers of NZ_CP007766_4

>4.1|1067460|59|NZ_CP007766|CRISPRCasFinder
TTCAACCATAAGAAATATATCATTAAAAAACATAAACAAAATTACCGCTACTAATACTT

CRISPR arrays and Neighbor proteins around NZ_CP007766_4

CRISPR arrays

The CRISPR arrays of NZ_CP007766_4

>merge|NZ_CP007766|4|1067426-1067552|CRISPRCasFinder
TTGGTGTTGGAGGATTTATAGGAATTGCTGAAAATTCAACCATAAGAAATATATCATTAAAAAACATAAACAAAATTACCGCTACTAATACTTTTGGTGTTGGAGGATTTATAGGAATTGCTGAAAA

>NZ_CP007766|4|4|1067426-1067552|CRISPRCasFinder
TTGGTGTTGGAGGATTTATAGGAATTGCTGAAAA	TTCAACCATAAGAAATATATCATTAAAAAACATAAACAAAATTACCGCTACTAATACTT
TTGGTGTTGGAGGATTTATAGGAATTGCTGAAAA

Neighbor Proteins Overview

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007766.1|WP_049984586.1|1054964_1055564_+|hypothetical-protein	unknown	unknown	gnl|CDD|238203
NZ_CP007766.1|WP_148308775.1|1078259_1079153_-|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	unknown	unknown	gnl|CDD|223222
NZ_CP007766.1|WP_044598885.1|1061491_1061935_+|GatB/YqeY-domain-containing-protein	unknown	unknown	gnl|CDD|224526
NZ_CP007766.1|WP_044598881.1|1057025_1058549_-|inorganic-phosphate-transporter	unknown	unknown	gnl|CDD|376541
NZ_CP007766.1|WP_044598883.1|1059692_1060460_-|pyridoxine-5'-phosphate-synthase	unknown	unknown	gnl|CDD|235380
NZ_CP007766.1|WP_044598888.1|1071502_1072012_-|nucleotide-exchange-factor-GrpE	unknown	unknown	gnl|CDD|172647
NZ_CP007766.1|WP_044598891.1|1073771_1074008_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP007766.1|WP_044598879.1|1055566_1056055_+|HIT-family-hydrolase,-FHIT-branch	unknown	unknown	gnl|CDD|238606
NZ_CP007766.1|WP_044598890.1|1073145_1073775_-|hypothetical-protein	unknown	unknown	unknown
NZ_CP007766.1|WP_044598894.1|1077211_1077616_-|Rrf2-family-transcriptional-regulator	unknown	unknown	gnl|CDD|273242
NZ_CP007766.1|WP_044598895.1|1077790_1078063_+|30S-ribosomal-protein-S15	unknown	unknown	gnl|CDD|180170
NZ_CP007766.1|WP_044598886.1|1061931_1062588_+|DNA/RNA-endonuclease-G	unknown	unknown	gnl|CDD|224777
NZ_CP007766.1|WP_049984587.1|1062653_1066061_+|hemagglutination-domain-protein	unknown	unknown	gnl|CDD|214908
NZ_CP007766.1|WP_044598884.1|1060515_1061481_+|exopolyphosphatase,-Ppx/GppA-family	unknown	unknown	gnl|CDD|223326
NZ_CP007766.1|WP_044598892.1|1073991_1075044_-|DHH-type-phosphohydrolase	unknown	unknown	gnl|CDD|225268
NZ_CP007766.1|WP_044598880.1|1056047_1057037_+|tRNA-2-selenouridine(34)-synthase-MnmH	unknown	unknown	gnl|CDD|236982
NZ_CP007766.1|WP_044598887.1|1069612_1071481_-|molecular-chaperone-DnaK	unknown	unknown	gnl|CDD|234715
NZ_CP007766.1|WP_044598882.1|1058595_1059696_-|4-hydroxythreonine-4-phosphate-dehydrogenase	unknown	unknown	gnl|CDD|179681
NZ_CP007766.1|WP_044598893.1|1075056_1077219_-|flagellar-biosynthesis-protein-FlhA	unknown	unknown	gnl|CDD|235672
NZ_CP007766.1|WP_044598889.1|1072008_1072791_-|HrcA-family-transcriptional-regulator	unknown	unknown	gnl|CDD|235174

rpsblast for functional proteins

Protein	Function_ID	Function_description	E-value
NZ_CP007766.1|WP_049984586.1|1054964_1055564_+|hypothetical-protein	gnl|CDD|238203	cd00331, IGPS, Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water. IGPS is active as a separate monomer in most organisms, but is also found fused to other enzymes as part of a bifunctional or multifunctional enzyme involved in tryptophan biosynthesis.	1.09547e-17
NZ_CP007766.1|WP_148308775.1|1078259_1079153_-|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase	gnl|CDD|223222	COG0144, Sun, tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis].	4.65173e-75
NZ_CP007766.1|WP_044598885.1|1061491_1061935_+|GatB/YqeY-domain-containing-protein	gnl|CDD|224526	COG1610, COG1610, Uncharacterized conserved protein [Function unknown].	5.31345e-39
NZ_CP007766.1|WP_044598881.1|1057025_1058549_-|inorganic-phosphate-transporter	gnl|CDD|376541	pfam01384, PHO4, Phosphate transporter family. This family includes PHO-4 from Neurospora crassa which is a is a Na(+)-phosphate symporter. This family also contains the leukaemia virus receptor.	1.96049e-53
NZ_CP007766.1|WP_044598883.1|1059692_1060460_-|pyridoxine-5'-phosphate-synthase	gnl|CDD|235380	PRK05265, PRK05265, pyridoxine 5'-phosphate synthase; Provisional.	3.04063e-106
NZ_CP007766.1|WP_044598888.1|1071502_1072012_-|nucleotide-exchange-factor-GrpE	gnl|CDD|172647	PRK14159, PRK14159, heat shock protein GrpE; Provisional.	3.60488e-66
NZ_CP007766.1|WP_044598879.1|1055566_1056055_+|HIT-family-hydrolase,-FHIT-branch	gnl|CDD|238606	cd01275, FHIT, FHIT (fragile histidine family): FHIT proteins, related to the HIT family carry a motif HxHxH/Qxx (x, is a hydrophobic amino acid), On the basis of sequence, substrate specificity, structure, evolution and mechanism, HIT proteins are classified into three branches: the Hint branch, which consists of adenosine 5' -monophosphoramide hydrolases, the Fhit branch, that consists of diadenosine polyphosphate hydrolases, and the GalT branch consisting of specific nucloside monophosphate transferases. Fhit plays a very important role in the development of tumours. Infact, Fhit deletions are among the earliest and most frequent genetic alterations in the development of tumours.	3.26217e-52
NZ_CP007766.1|WP_044598894.1|1077211_1077616_-|Rrf2-family-transcriptional-regulator	gnl|CDD|273242	TIGR00738, Putative_HTH-type_transcriptional_regulator, Rrf2 family protein. This model represents a superfamily of probable transcriptional regulators. One member, RRF2 of Desulfovibrio vulgaris is an apparent regulatory protein experimentally (MEDLINE:97293189). The N-terminal region appears related to the DNA-binding biotin repressor region of the BirA bifunctional according to results after three rounds of PSI-BLAST with a fairly high stringency. [Unknown function, General].	2.49684e-39
NZ_CP007766.1|WP_044598895.1|1077790_1078063_+|30S-ribosomal-protein-S15	gnl|CDD|180170	PRK05626, rpsO, 30S ribosomal protein S15; Reviewed.	5.16832e-49
NZ_CP007766.1|WP_044598886.1|1061931_1062588_+|DNA/RNA-endonuclease-G	gnl|CDD|224777	COG1864, NUC1, DNA/RNA endonuclease G, NUC1 [Nucleotide transport and metabolism].	1.72992e-42
NZ_CP007766.1|WP_049984587.1|1062653_1066061_+|hemagglutination-domain-protein	gnl|CDD|214908	smart00912, Haemagg_act, haemagglutination activity domain. This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.	8.00953e-12
NZ_CP007766.1|WP_044598884.1|1060515_1061481_+|exopolyphosphatase,-Ppx/GppA-family	gnl|CDD|223326	COG0248, GppA, Exopolyphosphatase [Nucleotide transport and metabolism / Inorganic ion transport and metabolism].	1.36161e-36
NZ_CP007766.1|WP_044598892.1|1073991_1075044_-|DHH-type-phosphohydrolase	gnl|CDD|225268	COG2404, COG2404, Predicted phosphohydrolase (DHH superfamily) [General function prediction only].	5.23198e-84
NZ_CP007766.1|WP_044598880.1|1056047_1057037_+|tRNA-2-selenouridine(34)-synthase-MnmH	gnl|CDD|236982	PRK11784, PRK11784, tRNA 2-selenouridine synthase; Provisional.	3.56415e-116
NZ_CP007766.1|WP_044598887.1|1069612_1071481_-|molecular-chaperone-DnaK	gnl|CDD|234715	PRK00290, dnaK, molecular chaperone DnaK; Provisional.	0
NZ_CP007766.1|WP_044598882.1|1058595_1059696_-|4-hydroxythreonine-4-phosphate-dehydrogenase	gnl|CDD|179681	PRK03946, pdxA, 4-hydroxythreonine-4-phosphate dehydrogenase; Provisional.	1.00767e-164
NZ_CP007766.1|WP_044598893.1|1075056_1077219_-|flagellar-biosynthesis-protein-FlhA	gnl|CDD|235672	PRK06012, flhA, flagellar type III secretion system protein FlhA.	0
NZ_CP007766.1|WP_044598889.1|1072008_1072791_-|HrcA-family-transcriptional-regulator	gnl|CDD|235174	PRK03911, PRK03911, HrcA family transcriptional regulator.	4.62898e-98

Protein sequences

>NZ_CP007766.1|WP_049984587.1|1062653_1066061_+|hemagglutination-domain-protein
MAVFSPRGGGSNNFDLTPSKKLTNHILLSSIVASLLFSPAFALPSGGKFTHGTSGTINVSGNNMHINGNKVNSVIQWGGGFNINKGESVNFGGNSKNYLNIAHGTNKSTIAGVLNASGNNVFLINPNGVIITKTGNINANRFVASTSSMDSKAMQEFANMKTFNDGLAFSPVFKPNPKGGNVINMGNINANDVTLQGNKVLLQAETSLDKDTNNIKLNQITTDNLTIKANEAYVDVATTKTNKINITANKGNAYLSATGYYYNPKRQYNEFNSINNKINKTYNQFISIGSDVDWWHFAKGWNESNDFRTIASEYRLINDINFNANCKNGICTGQNYANYWVDLNADGIKQDNEFTSMIVGEDYNSEFSKNFDGQGYTLKNINIDTTKLDNTYYAGIFGDARNATFKNINVDYMGGSVIGYYAAGFIASSSDSKFYNMKISNIGLIQARHRSGGFIADAYRGAYYNIHINNIKEISGKAASGGFVGFYSQPDSNYKDNVYFQDIYIDNINTIRDEDGHAGGFAGDLYSIYAGRTILKNIYINNINSIFASGDYGIYGGKDNTAKAGGFVGSIGLYGGGAYDIFNVSINNIGTIKSLGKITATGGFAGELLGGGAKFENISLNNIKNIISENNNKDSLGRSASSGGFAGYITGGYFNNISLNNIGTIKSIKTDTSHKEVGIYSGGFVGFLTYRANINNIFMFMDQGASILASGGSESLSGKFFGMIKEVSDFGINFSNINIYHHENDLTNATADQAYWKNNLINFNANINGEINIHTYTDKTQGYTDFKKQALTIDGLKEIDCDNGKKCLIFTTDFDIEKPTITSPIPNLDSILNEKPTLNKDDLISNAVWNDYIIKDIDKIKYVINIRLLDKLLKEYKTLANKTEDEQVKFITAYLGVKENDARALLQSLSFLNAYKDHDINKAQFENNAKKDFEQSFKKADDKIKDFNKNKNLWHTKLDKLNKEVVSLGLDIEKQLEQNQAKLKRFIKAYNEFLTLIDKGIKNENDPAFIAIKNNIKELDKEAKLLYAKLSIQENNLQIFKDKNNNNKVIVIGKFNTSLINTPNVDKPTQGGGIENDDYQKLSRQIASSQKQTPTFKYEEEETQEIEEAAITQRARTCIVSDNFKTMNPCVVGSY
>NZ_CP007766.1|WP_044598886.1|1061931_1062588_+|DNA/RNA-endonuclease-G
MKKILLLCFFVFNAFAYTQYELHPSFKKYFQECSLLMDKYYYINCYDYNYKGTKAIAYKLEAEILNQGHIKKRPRFSEDTNIAKKYRTYWEDYLRSGYTRGHVVPNQSMNATKQAQLSTFLMSNITPQKKEINAKIWNEIEQRERYLAKKYKELEVLNLIIYEQNPKRIKNNIAIPSFYVKILKAKNYTECYKVPNNDNFAEFNRNYFKQDCKNYINY
>NZ_CP007766.1|WP_044598885.1|1061491_1061935_+|GatB/YqeY-domain-containing-protein
MSLKDQILEDIKEAMRSKDDFKRNTLRTLNACFKQIEVDERITLDNERIYKIIASEIKKRNEAALAFSKGAREDLAQKELQEVAILSAYLPKQLSDEELENELKKLIEKLQIQSLKEQGILMKEAKMAFGASVDGKRLNEMVRKLLA
>NZ_CP007766.1|WP_044598884.1|1060515_1061481_+|exopolyphosphatase,-Ppx/GppA-family
MLGIDIGSNTLRAVLMDENLNKLKSEEFIIAAAKNMQNDLISDEAVQRLFNALKNLQEKNYDLSKAMAVATAAFRKAKNSYSIFEKIEKEFKLKVKIIDAKTEAKLSVLGMQERLKSLSLFRKNLSYCDLGGASCEISNDDFSKSYDFGIISFYERMHFKNLKPNAYVKLFKKYPKNLSIIKDKKLKIHLSPYPMHLKQLALNAFNITENIKKHLKGNFFVLNSGVPTTLCAYKQGIKYKDYLEESVNGKILHQKDFFNFALKIWNLEQKKAKIYLGENRKKYLIAGSMILFALFSKQKLIVIDDGVREGVCIAHFKNIQF
>NZ_CP007766.1|WP_044598883.1|1059692_1060460_-|pyridoxine-5'-phosphate-synthase
MLLGVNIDHIAVLREARKVNDPDLLEAAILSANLADQITIHVREDRRHANEFDLENILKYCKCIVNLECSIDMIEYAIKYKPSRVTLVPEKRQELTTEGGLNLENEKLKEAINALKKEQIEVSLFVDPNLKDIEKSSALNADFVELHTGFYANVYNALYTNINQTPYALPELILSKNELKKLLENELQRLKQSANLAKSLNLEVAAGHGLNYKNVKNIVDILEIKELNIGQSIVARSVFVGLEKAILQMKALIKR
>NZ_CP007766.1|WP_044598882.1|1058595_1059696_-|4-hydroxythreonine-4-phosphate-dehydrogenase
MKKIAISIGDINGIGMQILLASHDELVKICKPYYFVHYDLIKKASKLLNLKPKAKMNLVEFVNCEQENFSFKEEKEDFVIYTFSHKLNYEFDYKFELNPANLDAKSGMYSFLSFQAASYCAYLFLDALLTLPINKKTWQMAGIEYKGHTEALRDFFKQDAIMMLGCEKLFVALYTEHIALREVYKHIKALKLAQFLINFYKCTLFENIGVLSFNPHASDDGVIGGEEEIEIKKAIKMANVFLKDENLSLLNLEDISFLKQKEAELAHKKDVFLSQPLVADSAFTPFSLSKCKYLVSMYHDLALAPLKALYFDESINVSLNLPIIRTSVDHGTAYDKAYKNENINLQSYMQAANAAINFAKIKEKNK
>NZ_CP007766.1|WP_044598881.1|1057025_1058549_-|inorganic-phosphate-transporter
MSRDNAIAFFIFIVSVLCFFVWGYNYIPDNSMVLFVLASVFGIFMAFNVGGNDVANSFGTSVGAKTVTIKQALIIAAVFELSGAVFAGGEVTNTIRSGIVVLPDGVDPMVFVCVMLSALLSSGIWLFIASKKGLPVSTTHSIIGGIVGSSIAMGFMFFDKEQAFSMVNWNGIYKIAMSWVISPLLGGIVAYLIYAYIYKKILKPSEEISLKVKAIKAEKKTFKEEYFLNLKNKTHEEQIKELSAIVLDDEENKSAYKLKIKELKEKEKSIDVFSKMKFHVPLIAAIGALIIASMFLFKGLNNVSTLDLMQNLWIVSIITIFAYIVTLAVVRLMKKTQVNKTIEKIFSWFQIFTASSFAFSHGANDIANALGPFAAILDVLKNNTINPNSPVPFAVMLMFGIALVVGLWFLGKEVIQTVGSKLAEIKPTTGFSAELGASIVILLATQLGIPVSSTHILIGAILGIGLFNKDAKWAMMKPIGLAWVITLPVAGVLSSIIFIFFINFLGL
>NZ_CP007766.1|WP_044598880.1|1056047_1057037_+|tRNA-2-selenouridine(34)-synthase-MnmH
MYKEVDFQKFLTYDFELLIDARSPREYTHAHIKNAKNYYALNDDEFEEIGTLYKKNKGLAKIKGASYICKNMSYHINTIYNAYKIGSLVGIYCARGGKRSKAIALILAELGYRVVRLEGGYKAYRSYVSAFFQKELKIDFLCLCGNTASGKSELIDSLPYALNLEKLANHQGSSFGKIYGKQPSQKAFEDELFYFLKNYSYKICFIEAESRQIGNLTLPLNLYNAMQKGRKIWCECALNLRVERILKIYAHIEKSYFYECVEKISPYISKDFKTILCQNYENNDLKSCVLMLIKYYDRVYKKPQKIDFYLNNDNPKQAKEKLVKLILQA
>NZ_CP007766.1|WP_044598879.1|1055566_1056055_+|HIT-family-hydrolase,-FHIT-branch
MEYLYAPWRDVYFSNKDKDFCPFCHCVQNLNEDEKLGVIFRAKQCFGIMNKYPYSPGHFMIIPYKHLENIEDLESDIWLEISHFVQIGVKILKQEFQAKGVNIGMNLGSAAGAGIAPHCHYHLIPRWAGDTNFITTIGQTRVCGSDLGKIYTTLYKAFKQYV
>NZ_CP007766.1|WP_049984586.1|1054964_1055564_+|hypothetical-protein
MFEKINLEQYFLKTQKILEEKKALFSYDMLGRSLASNAFYPKDIYKLLLEQKLSILFYAKNLDFNKKDFDGIILPTSPLEKQDIQNLSFFRRYHEKPLIQFDFIFDEYQILESLVYGADAFIIFPKMLKILQLKKLYNFAIHLGLEAIFYVESKKDINNAILAGARIFLIEDEKLLPLIPKNKALISKSIQNLHSYVKE
>NZ_CP007766.1|WP_044598887.1|1069612_1071481_-|molecular-chaperone-DnaK
MSKVIGIDLGTTNSCVAVYERGESKVIPNKEGKNTTPSVVAFTDKGEVLVGDSAKRQAVTNPEKTIYSIKRIMGLMINEDAAKEAKNRLPYHITERNGACAIEIAGKIYTPQEISAKVLMKLKEDAEAFLGEKVVDAVITVPAYFNDAQRKATKEAGTIAGLNVLRIINEPTSAALAYGLDKKDSEKIVVYDLGGGTFDVTVLETGDNVVEVLATGGNAFLGGDDFDNKLIDFLASEFKDETGIDLKNDVMALQRLKEAAENAKKELSSANETEINLPFITADASGPKHLVKKLTRAKFESMIDGLVAETISKINEVVKDAGLDKSEVKEIVMVGGSTRVPLVQEEVKKAFGKELNKSVNPDEVVAIGAAIQGAVIKGDVKDVLLLDVTPLSLGIETLGGVMTKIIEKGTTIPTKKEQVFSTAEDNQSAVTINVLQGEREFSRDNKSLGNFNLEGIPPAPRGMPQIEVTFDIDANGILTVSAKDKATGKAQEIKITGSSGLSEEEINNMVKDAELHKEEDKKRKEAVEARNAADSLAHQVEKSLNELGDKVSDEDKANIQKALDDLKETLKNQNATKEEIESKMKALSEVSHKLAENMYKKDEKPADNKDKKDDDVIDAEVE
>NZ_CP007766.1|WP_044598888.1|1071502_1072012_-|nucleotide-exchange-factor-GrpE
MSEEKQNEAMQDEAQETMQDENAEFQKLQEEYNALKDTYLRANAEFENIKKRMEKEKISATIYANESFAKDLLDVVDALEAAISVEASDELSLKIKEGVQNTLDLLLKKLEKHMVKPIEADGEFNPNLHEAMFHVESADHESGHIVNLLQKGYMMNDRVIRSAKVSVAK
>NZ_CP007766.1|WP_044598889.1|1072008_1072791_-|HrcA-family-transcriptional-regulator
MKSFSKKDLILKTIIETYLNGNNPVGSHELNHKVSIPASTIRVYFKKLSDEGILTQLHISSGRIPTINAMRAYWYEQLIEEEVVLNDLDLLKFLLDKFEIYALVYGGDELILQDIAVVNTKFIILDFGENELILRYSQDNLLFMQRLVGLDLKSIENLAFKVNFEELLEKIFILKQAKIYYRYNESKAYQIYQNDKFAKLLSPKIGFYFDEKLKFEPLFEEGFMGLKLSSTFLGQKSNIIFAGSVYSDFKTMLNIIKEAA
>NZ_CP007766.1|WP_044598890.1|1073145_1073775_-|hypothetical-protein
MKILLILFVCVFTHASIYEVLNDFAYNKQNTINLNTSSALLLEVKDEKQACVDILLAKNKAYIVKIYPKCKNLNETSLNEYLNTNFLNLYTKDLTKLRKELADIKNIMRDFMIYYTLNHSFANDIRKMSKSDKLQVYTLDEKVGGKILYKVNDKACVVFDLYLDENLQASMQISGMENLDKACMELISSPEFKDLSFTKEGMRKYKLKN
>NZ_CP007766.1|WP_044598891.1|1073771_1074008_-|hypothetical-protein
MRTNHDFKEEIENLQYELSIVLEAMLLYAGVKKTKLEKAIELYIDCIDEVCQNTQKEGVDEILEVVEHLKKHHKDLFE
>NZ_CP007766.1|WP_044598892.1|1073991_1075044_-|DHH-type-phosphohydrolase
MKIYHLSHTDLDGYACQYVLDFYFKNCYFFNSNYGKEINENFNVIFKSIEEDLKQNPNEEFVILITDLNLTPSQCEDFQKAIEGKKIKLLLLDHHQSGLECMQKYPWYFLDSSRCATKIVYDFFSKCYGENESLSSFVDVVNAVDIWLSEDKNFELGKVLLGMVSTAKEINKTMFAQENIKYLFYLFDKSRQFIHKKNSHIALDNDLHKIKKDFFKKEEDDTLSNLISKFVVERLSINKEKFSVYYKGHKGLLTSNIGNTSVIGNDFLLQNPEFDFFVDLSSRKTLSFRANNKLDVSLMAKYLVNGGGHKNASGGLFAAYKDSANYDFIKAQFIDLIKSKELKENNENKS
>NZ_CP007766.1|WP_044598893.1|1075056_1077219_-|flagellar-biosynthesis-protein-FlhA
MAKRNILTLVLPWIAPLVAPIVKAKSLTVVAMIIAILAIIIVPLPSIVLDFFLALSIAISVLIILISLYIPKPTDLTTFPTMILIITLFRLSLNIATTRMILSEGHQGPTAVSDIVASFGEFVVGGNYVIGMVVFCILVLINFMVVTKGSTRVSEVQARFTLDAMPGKQMAIDADLNAGLIDEKTARERRQEIIAEANFYGAMDGSSKFIKGDAVAGIIITIVNLIGGFMIGYFQHDMELGECASTYTILTIGDGLVSQIPGLITSTATAIIITRASKDEDNFAEGSINQLLGEYKTLLIVGFILFIFALVPGLPHFSLGFMALVFLGLGYMIKQVQEGKIQINAISSKKSQEAHDEEQTSKPQKRTEEEILKEEENKITDILKLEILELELGYGLIKLAESELTERIRSTRRNIAQSLGFLMPKIRIRDNLQLKPNEYVFKLKGVGIASAEIYPDKYLAMDSGFITEPVEGIATKEPAFNSDALWIDANLKDEATLNGYIVIDPASVISTHMSELIKANASELLTKQEVQNLLDKIKNDYPIVVDDCLRVASIGLIQKVLKALLKEHIPIKDMLTILESISDIAEVSKSLDMIIEHVRASLARAITNLYVDEKGQISFYIFDAAAAAKLMEHVQFKDGTYHLMINVSQTGALVEALKAELASVANTRIKPFLLCVEPQLRKFIADICSNFGINITVLSFAEIAENTKFETEGIIKVDDL
>NZ_CP007766.1|WP_044598894.1|1077211_1077616_-|Rrf2-family-transcriptional-regulator
MLFTKASEYALLSLIHIAKSQDPQDVDTMSSVLDIPKSFLAKILQALAKDELLKSYKGAKGGFALVKKPSEYTLKEIINSVEKKSINVFECSNGVCPSQKGDNCNIMPVLVRLQNKIDDFLVSITLEDIIKNNG
>NZ_CP007766.1|WP_044598895.1|1077790_1078063_+|30S-ribosomal-protein-S15
MALDSAKKAEIVAKFARKEGDTGSPEVQIALLSARIADLTEHLKIYKKDFSSRLGLLKLVGQRKRLLAYLKRKDYQAYAKLINELNLRDK
>NZ_CP007766.1|WP_148308775.1|1078259_1079153_-|RsmB/NOP-family-class-I-SAM-dependent-RNA-methyltransferase
MALFDLQSALDEIYTKEQKEQILQSFIEEKNINIFRNALTINALELEKILNSEQILYEKISEFCYKIPYKYKSNLSSMKAFNEGFFYIQNYSSYLCAKALDVRAGQNVLDMCAAPGGKSINLANFMQNEGYLACVEASKDRFFILQENLKKYGVKNAKTFLKDAKSIGRICPLKFDKILLDAPCSTFAKMGLKIQKNTKEIKQITSLQKKLLHSALLALKHGGELVYSTCTFLQEENEEVLENAFRNKDFNLQLLDFELLNADFVQAKSKEFDLSFAKRVLPNDYVDGFFIAKVKKL

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007766_1	1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228075-228105	31	NC_007962	Campylobacter lari plasmid pUPTC237 DNA, complete sequence	2210-2240	0	1.0
NZ_CP007766_1	1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228075-228105	31	NZ_CP007768	Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence	1233-1263	2	0.935
NZ_CP007766_1	1.5|228208|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228208-228238	31	MG945779	UNVERIFIED: Microviridae sp. isolate 4059-1602, complete genome	1036-1066	2	0.935
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	MN693712	Marine virus AFVG_250M462, complete genome	18878-18907	5	0.833
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR214999	Mycoplasma conjunctivae strain NCTC10147 plasmid 3	49266-49295	6	0.8
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	LR214965	Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11	38858-38887	6	0.8
NZ_CP007766_1	1.6|228275|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228275-228304	30	KU878088	Bacillus phage AR9, complete genome	185047-185076	6	0.8
NZ_CP007766_1	1.6|228275|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228275-228304	30	MF360957	Bacillus virus PBS1, complete genome	95304-95333	6	0.8
NZ_CP007766_1	1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228407-228436	30	MN693084	Marine virus AFVG_25M545, complete genome	32556-32585	6	0.8
NZ_CP007766_1	1.2|228009|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228009-228038	30	NZ_CP032366	Bacillus wiedmannii strain SR52 plasmid unnamed1, complete sequence	38833-38862	7	0.767
NZ_CP007766_1	1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228075-228105	31	AP018319	Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome	440678-440708	7	0.774
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_KP842560	Enterococcus faecium strain 17i48 ST17 plasmid pRUM-like, complete sequence	7783-7812	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP018831	Enterococcus faecium strain ISMMS_VRE_9 plasmid p2_ISMMS_VRE9, complete sequence	40965-40994	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP041264	Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R3, complete sequence	46820-46849	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP027498	Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence	19556-19585	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP027507	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence	17985-18014	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP027510	Enterococcus faecium strain AUSMDU00004055 plasmid unnamed4, complete sequence	25202-25231	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP027503	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed2, complete sequence	46652-46681	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP027505	Enterococcus faecium strain AUSMDU00004142 plasmid unnamed4, complete sequence	22583-22612	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135334	Enterococcus faecium isolate E7471 plasmid 4	9003-9032	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP046075	Enterococcus faecium strain VRE plasmid p3_03A17012, complete sequence	8545-8574	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP027514	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed2, complete sequence	46651-46680	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP027516	Enterococcus faecium strain AUSMDU00004028 plasmid unnamed4, complete sequence	29026-29055	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP013010	Enterococcus faecium strain UW7606x64/3 TC1 plasmid pWCF-TC1, complete sequence	38635-38664	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135281	Enterococcus faecium isolate E6975 plasmid 4	32954-32983	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135257	Enterococcus faecium isolate E7098 plasmid 4	52922-52951	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP041254	Enterococcus faecium strain 515 plasmid p169, complete sequence	38640-38669	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP019209	Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence	88481-88510	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135437	Enterococcus faecium isolate E8691 plasmid 3	12749-12778	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135484	Enterococcus faecium isolate E4456 plasmid 3	52253-52282	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135477	Enterococcus faecium isolate E8423 plasmid 3	37556-37585	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135176	Enterococcus faecium isolate E4402 plasmid 3	9584-9613	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135221	Enterococcus faecium isolate E7040 plasmid 3	99651-99680	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135326	Enterococcus faecium isolate E7654 plasmid 3	49248-49277	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135359	Enterococcus faecium isolate E7948 plasmid 3	8672-8701	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135386	Enterococcus faecium isolate E7933 plasmid 3	55282-55311	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135319	Enterococcus faecium isolate E7663 plasmid 3	49248-49277	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_AP014865	Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence	234864-234893	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP040742	Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence	127036-127065	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP014533	Enterococcus faecium strain E745 plasmid pl4, complete sequence	4843-4872	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP014533	Enterococcus faecium strain E745 plasmid pl4, complete sequence	15434-15463	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP023425	Enterococcus faecium strain K60-39 plasmid pTT39_p2, complete sequence	53774-53803	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP041273	Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S3, complete sequence	46819-46848	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP040708	Enterococcus faecium strain HOU503 plasmid p2	19688-19717	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP040708	Enterococcus faecium strain HOU503 plasmid p2	65143-65172	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP035650	Enterococcus faecium strain UAMSEF_08 plasmid unnamed2, complete sequence	30848-30877	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP035644	Enterococcus faecium strain UAMSEF_01 plasmid unnamed2, complete sequence	30869-30898	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135310	Enterococcus faecium isolate E7240 plasmid 4	32384-32413	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP016166	Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p3, complete sequence	39110-39139	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP018825	Enterococcus faecium strain ISMMS_VRE_12 plasmid p2_ISMMS_VRE12, complete sequence	39458-39487	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_KX810025	Enterococcus faecium strain Efm008 plasmid pJEG040, complete sequence	6283-6312	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_KX574671	Enterococcus faecium strain V24 plasmid pHvH-V24, complete sequence	34595-34624	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_KY554216	Enterococcus faecium strain Efa-125 plasmid pEfa-125gr, complete sequence	7521-7550	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_KY595962	Enterococcus faecium strain VREfm1 plasmid pPEC286, complete sequence	4599-4628	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_KY595966	Enterococcus faecium strain VREfm81 plasmid pBUD102, complete sequence	4599-4628	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NC_021170	Enterococcus faecium plasmid pF856, complete sequence	4599-4628	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP013995	Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence	241228-241257	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP014452	Enterococcus faecium strain ATCC 700221 plasmid unnamed3, complete sequence	20942-20971	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP018070	Enterococcus faecium strain VRE001 plasmid unnamed1, complete sequence	33090-33119	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LR135280	Enterococcus faecium isolate E6975 plasmid 3	5181-5210	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP019989	Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence	231915-231944	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NC_005000	Enterococcus faecium U37 plasmid pRUM, complete sequence	4600-4629	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP044266	Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence	40260-40289	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP036247	Enterococcus faecalis R712 plasmid pR712_01, complete sequence	49010-49039	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_LN999989	Enterococcus faecium isolate EFE11651 plasmid III, complete sequence	12805-12834	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NC_014959	Enterococcus faecium plasmid pS177, complete sequence	4600-4629	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP042875	Bacillus cereus strain 09 plasmid unnamed1, complete sequence	385152-385181	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP019993	Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence	239296-239325	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP035661	Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence	224983-225012	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP035667	Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence	224852-224881	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NC_017962	Enterococcus faecium DO plasmid 2, complete sequence	61324-61353	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP018131	Enterococcus faecium strain A_020709_82 plasmid unnamed3, complete sequence	16512-16541	7	0.767
NZ_CP007766_1	1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228142-228171	30	NZ_CP012431	Enterococcus faecium strain ISMMS_VRE_1 plasmid ISMMS_VRE_p2, complete sequence	43707-43736	7	0.767
NZ_CP007766_1	1.7|228341|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228341-228370	30	NZ_CP024460	Klebsiella pneumoniae strain QS17-0161 plasmid pMRSN480738_112.7, complete sequence	48189-48218	7	0.767
NZ_CP007766_1	1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228407-228436	30	MN693023	Marine virus AFVG_117M30, complete genome	30116-30145	7	0.767
NZ_CP007766_1	1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228407-228436	30	MN855594	Siphoviridae sp. isolate 197, complete genome	4481-4510	7	0.767
NZ_CP007766_1	1.11|228605|30|NZ_CP007766|CRISPRCasFinder,CRT	228605-228634	30	MN693524	Marine virus AFVG_25M219, complete genome	4597-4626	7	0.767
NZ_CP007766_1	1.1|227942|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	227942-227972	31	NC_015386	Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete sequence	2975-3005	8	0.742
NZ_CP007766_1	1.2|228009|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228009-228038	30	NC_013373	Staphylococcus sp. CDC3 plasmid SAP020A, complete sequence	29570-29599	8	0.733
NZ_CP007766_1	1.7|228341|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228341-228370	30	NZ_CP042510	Leclercia adecarboxylata strain E1 plasmid pE1_005, complete sequence	2193-2222	8	0.733
NZ_CP007766_1	1.7|228341|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228341-228370	30	NC_010371	Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence	107216-107245	8	0.733
NZ_CP007766_1	1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228407-228436	30	NC_010279	Staphylococcus aureus plasmid pV030-8, complete sequence	34591-34620	8	0.733
NZ_CP007766_1	1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228407-228436	30	NC_018967	Staphylococcus aureus plasmid p18813-P03, complete sequence	25579-25608	8	0.733
NZ_CP007766_1	1.10|228539|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228539-228568	30	MN534316	Lactococcus phage proPhi2, complete genome	21042-21071	8	0.733
NZ_CP007766_1	1.10|228539|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228539-228568	30	MN534317	Lactococcus phage proPhi4, complete genome	21042-21071	8	0.733
NZ_CP007766_1	1.11|228605|30|NZ_CP007766|CRISPRCasFinder,CRT	228605-228634	30	NZ_CP027420	Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed1, complete sequence	6378-6407	8	0.733
NZ_CP007766_1	1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228075-228105	31	KF620435	Shigella phage pSb-1, complete genome	55207-55237	9	0.71
NZ_CP007766_1	1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228075-228105	31	NZ_CP034945	Enterococcus faecium strain NM213 plasmid unnamed2, complete sequence	46111-46141	9	0.71
NZ_CP007766_1	1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228075-228105	31	NZ_CP034948	Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence	148913-148943	9	0.71
NZ_CP007766_1	1.6|228275|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT	228275-228304	30	NZ_CP040452	Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence	1655369-1655398	9	0.7

1. spacer 1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_007962 (Campylobacter lari plasmid pUPTC237 DNA, complete sequence) position: , mismatch: 0, identity: 1.0

tgaaagtaaattcaatacctacaacttttcc	CRISPR spacer
tgaaagtaaattcaatacctacaacttttcc	Protospacer
*******************************

2. spacer 1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP007768 (Campylobacter peloridis LMG 23910 plasmid pPEL2, complete sequence) position: , mismatch: 2, identity: 0.935

tgaaagtaaattcaatacctacaacttttcc	CRISPR spacer
taaaggtaaattcaatacctacaacttttcc	Protospacer
*.**.**************************

3. spacer 1.5|228208|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to MG945779 (UNVERIFIED: Microviridae sp. isolate 4059-1602, complete genome) position: , mismatch: 2, identity: 0.935

tgccttatcgtttgttatgggacgattttga	CRISPR spacer
ttccttatcgtttgttatgggacgagtttga	Protospacer
* *********************** *****

4. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to MN693712 (Marine virus AFVG_250M462, complete genome) position: , mismatch: 5, identity: 0.833

-agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
tagatgc-ttcattagcaaaaacaactttaa	Protospacer
 ****.. ** ***************** **

5. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR214999 (Mycoplasma conjunctivae strain NCTC10147 plasmid 3) position: , mismatch: 6, identity: 0.8

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
aaaaagcttaattagcaaaaacaaccttaa	Protospacer
*.* *  ******************.* **

6. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to LR214965 (Mycoplasma fermentans strain NCTC10117 genome assembly, plasmid: 11) position: , mismatch: 6, identity: 0.8

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
aaaaagcttaattagcaaaaacaaccttaa	Protospacer
*.* *  ******************.* **

7. spacer 1.6|228275|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to KU878088 (Bacillus phage AR9, complete genome) position: , mismatch: 6, identity: 0.8

aaaacgccttttgcactaactttaacttca	CRISPR spacer
gaaagaacttgtggactaactttaacttca	Protospacer
.*** . *** ** ****************

8. spacer 1.6|228275|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to MF360957 (Bacillus virus PBS1, complete genome) position: , mismatch: 6, identity: 0.8

aaaacgccttttgcactaactttaacttca	CRISPR spacer
gaaagaacttgtggactaactttaacttca	Protospacer
.*** . *** ** ****************

9. spacer 1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to MN693084 (Marine virus AFVG_25M545, complete genome) position: , mismatch: 6, identity: 0.8

tttcaacttctttaaaagcttatgattatc	CRISPR spacer
tatcaacttctttaaaagctttttattggg	Protospacer
* ******************* * ***.  

10. spacer 1.2|228009|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP032366 (Bacillus wiedmannii strain SR52 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

tggatatgctccatcatccccatttttttt	CRISPR spacer
tggatattctccatcatcgccataaatgat	Protospacer
******* ********** ****   *  *

11. spacer 1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to AP018319 (Nostoc sp. HK-01 plasmid plasmid1 DNA, complete genome) position: , mismatch: 7, identity: 0.774

tgaaagtaaattcaatacctacaacttttcc	CRISPR spacer
tcggaacaaattcaatccctacaactattcc	Protospacer
* ..*..********* ********* ****

12. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KP842560 (Enterococcus faecium strain 17i48 ST17 plasmid pRUM-like, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

13. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018831 (Enterococcus faecium strain ISMMS_VRE_9 plasmid p2_ISMMS_VRE9, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

14. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041264 (Enterococcus faecium strain VVEswe-R plasmid pVVEswe-R3, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

15. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027498 (Enterococcus faecium strain AUSMDU00004167 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

16. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027507 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

17. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027510 (Enterococcus faecium strain AUSMDU00004055 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

18. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027503 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

19. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027505 (Enterococcus faecium strain AUSMDU00004142 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

20. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135334 (Enterococcus faecium isolate E7471 plasmid 4) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

21. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP046075 (Enterococcus faecium strain VRE plasmid p3_03A17012, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

22. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027514 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

23. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP027516 (Enterococcus faecium strain AUSMDU00004028 plasmid unnamed4, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

24. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013010 (Enterococcus faecium strain UW7606x64/3 TC1 plasmid pWCF-TC1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

25. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135281 (Enterococcus faecium isolate E6975 plasmid 4) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

26. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135257 (Enterococcus faecium isolate E7098 plasmid 4) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

27. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041254 (Enterococcus faecium strain 515 plasmid p169, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

28. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019209 (Enterococcus faecium strain 2014-VREF-41 plasmid p41-1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

29. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135437 (Enterococcus faecium isolate E8691 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

30. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135484 (Enterococcus faecium isolate E4456 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

31. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135477 (Enterococcus faecium isolate E8423 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

32. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135176 (Enterococcus faecium isolate E4402 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

33. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135221 (Enterococcus faecium isolate E7040 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

34. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135326 (Enterococcus faecium isolate E7654 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

35. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135359 (Enterococcus faecium isolate E7948 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

36. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135386 (Enterococcus faecium isolate E7933 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

37. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135319 (Enterococcus faecium isolate E7663 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

38. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_AP014865 (Bacillus thuringiensis serovar tolworthi strain Pasteur Institute Standard strain plasmid pKK1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
cgatctgttaaatagcaaaaacaacatttc	Protospacer
 *** ****** ************* *   

39. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040742 (Enterococcus faecium strain VRE1 plasmid pVRE1-VanA, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

40. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014533 (Enterococcus faecium strain E745 plasmid pl4, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

41. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014533 (Enterococcus faecium strain E745 plasmid pl4, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

42. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP023425 (Enterococcus faecium strain K60-39 plasmid pTT39_p2, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

43. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP041273 (Enterococcus faecium strain VVEswe-S plasmid pVVEswe-S3, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

44. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040708 (Enterococcus faecium strain HOU503 plasmid p2) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

45. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040708 (Enterococcus faecium strain HOU503 plasmid p2) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

46. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035650 (Enterococcus faecium strain UAMSEF_08 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

47. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035644 (Enterococcus faecium strain UAMSEF_01 plasmid unnamed2, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

48. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135310 (Enterococcus faecium isolate E7240 plasmid 4) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

49. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP016166 (Enterococcus faecium strain ISMMS_VRE_11 plasmid ISMMS_VRE11_p3, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

50. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018825 (Enterococcus faecium strain ISMMS_VRE_12 plasmid p2_ISMMS_VRE12, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

51. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX810025 (Enterococcus faecium strain Efm008 plasmid pJEG040, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

52. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KX574671 (Enterococcus faecium strain V24 plasmid pHvH-V24, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

53. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY554216 (Enterococcus faecium strain Efa-125 plasmid pEfa-125gr, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

54. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY595962 (Enterococcus faecium strain VREfm1 plasmid pPEC286, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

55. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_KY595966 (Enterococcus faecium strain VREfm81 plasmid pBUD102, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

56. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_021170 (Enterococcus faecium plasmid pF856, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

57. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013995 (Enterococcus faecium strain 6E6 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

58. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014452 (Enterococcus faecium strain ATCC 700221 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

59. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018070 (Enterococcus faecium strain VRE001 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

60. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LR135280 (Enterococcus faecium isolate E6975 plasmid 3) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

61. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019989 (Enterococcus faecium isolate 2014-VREF-63 plasmid p63-1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

62. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_005000 (Enterococcus faecium U37 plasmid pRUM, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

63. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP044266 (Enterococcus faecium strain V1836 plasmid pHVH-V1836-2, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

64. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP036247 (Enterococcus faecalis R712 plasmid pR712_01, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

65. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_LN999989 (Enterococcus faecium isolate EFE11651 plasmid III, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

66. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_014959 (Enterococcus faecium plasmid pS177, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

67. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042875 (Bacillus cereus strain 09 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
cgatctgttaaatagcaaaaacaacatttc	Protospacer
 *** ****** ************* *   

68. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP019993 (Enterococcus faecium isolate 2014-VREF-268 plasmid p268-1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

69. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035661 (Enterococcus faecium strain UAMSEF_09 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

70. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP035667 (Enterococcus faecium strain UAMSEF_20 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

71. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_017962 (Enterococcus faecium DO plasmid 2, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

72. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP018131 (Enterococcus faecium strain A_020709_82 plasmid unnamed3, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

73. spacer 1.4|228142|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP012431 (Enterococcus faecium strain ISMMS_VRE_1 plasmid ISMMS_VRE_p2, complete sequence) position: , mismatch: 7, identity: 0.767

agatatgttaattagcaaaaacaacttaaa	CRISPR spacer
gttttagttaattagcaaaaacaacaaaaa	Protospacer
.  *  *******************  ***

74. spacer 1.7|228341|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP024460 (Klebsiella pneumoniae strain QS17-0161 plasmid pMRSN480738_112.7, complete sequence) position: , mismatch: 7, identity: 0.767

taagcaagtttttcagctaactctgcaata	CRISPR spacer
gacaatacttttccagctaactctgcaata	Protospacer
 * .  * ****.*****************

75. spacer 1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to MN693023 (Marine virus AFVG_117M30, complete genome) position: , mismatch: 7, identity: 0.767

tttcaacttctttaaaagcttatgattatc	CRISPR spacer
tttcaactcctttataagcttataaggact	Protospacer
********.***** ********.*  *..

76. spacer 1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to MN855594 (Siphoviridae sp. isolate 197, complete genome) position: , mismatch: 7, identity: 0.767

tttcaacttctttaaaagcttatgattatc	CRISPR spacer
ctcccagttctttaaaagcctatgattaca	Protospacer
.*.* * ************.********. 

77. spacer 1.11|228605|30|NZ_CP007766|CRISPRCasFinder,CRT matches to MN693524 (Marine virus AFVG_25M219, complete genome) position: , mismatch: 7, identity: 0.767

atatgtg---ctgtagcttccaaagtttcttta	CRISPR spacer
---tgtaatcgtgtagcttccaaagtttttttg	Protospacer
   ***.    *****************.***.

78. spacer 1.1|227942|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_015386 (Treponema succinifaciens DSM 2489 plasmid pTRESU01, complete sequence) position: , mismatch: 8, identity: 0.742

taatcgtttgcctctattttttccaaaggaa	CRISPR spacer
aaatcgcttgcctctattttttcccattttt	Protospacer
 *****.***************** *     

79. spacer 1.2|228009|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_013373 (Staphylococcus sp. CDC3 plasmid SAP020A, complete sequence) position: , mismatch: 8, identity: 0.733

tggatatgctccatcatccccatttttttt	CRISPR spacer
taataatgctctatcatcctcattttttaa	Protospacer
*..  ******.*******.********  

80. spacer 1.7|228341|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP042510 (Leclercia adecarboxylata strain E1 plasmid pE1_005, complete sequence) position: , mismatch: 8, identity: 0.733

taagcaagtttttcagctaactctgcaata	CRISPR spacer
acttcaagtttatcagctaactctgcggca	Protospacer
    ******* **************...*

81. spacer 1.7|228341|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_010371 (Finegoldia magna ATCC 29328 plasmid pFMC, complete sequence) position: , mismatch: 8, identity: 0.733

taagcaagtttttcagctaactctgcaata	CRISPR spacer
ccagcaaattttccagctaactctggagac	Protospacer
. *****.****.************ *.  

82. spacer 1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_010279 (Staphylococcus aureus plasmid pV030-8, complete sequence) position: , mismatch: 8, identity: 0.733

tttcaacttctttaaaagcttatgattatc	CRISPR spacer
cagttacttctttaaaagcttataatcttc	Protospacer
.  . ******************.**. **

83. spacer 1.8|228407|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NC_018967 (Staphylococcus aureus plasmid p18813-P03, complete sequence) position: , mismatch: 8, identity: 0.733

tttcaacttctttaaaagcttatgattatc	CRISPR spacer
cagttacttctttaaaagcttataatcttc	Protospacer
.  . ******************.**. **

84. spacer 1.10|228539|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to MN534316 (Lactococcus phage proPhi2, complete genome) position: , mismatch: 8, identity: 0.733

ctttgataagctttgcagtttgatttggct	CRISPR spacer
atttaataagctttgcagtttcatcagaag	Protospacer
 ***.**************** **. *.  

85. spacer 1.10|228539|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to MN534317 (Lactococcus phage proPhi4, complete genome) position: , mismatch: 8, identity: 0.733

ctttgataagctttgcagtttgatttggct	CRISPR spacer
atttaataagctttgcagtttcatcagaag	Protospacer
 ***.**************** **. *.  

86. spacer 1.11|228605|30|NZ_CP007766|CRISPRCasFinder,CRT matches to NZ_CP027420 (Staphylococcus cohnii strain FDAARGOS_334 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733

atatgtgctgtagcttccaaagtttcttta	CRISPR spacer
tccattactttagcttcaaaagtttcttta	Protospacer
 .   *.** ******* ************

87. spacer 1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to KF620435 (Shigella phage pSb-1, complete genome) position: , mismatch: 9, identity: 0.71

tgaaagtaaattcaatacctacaacttttcc	CRISPR spacer
ccgtaataaattcaatacctacaacattgaa	Protospacer
. . *.******************* **   

88. spacer 1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034945 (Enterococcus faecium strain NM213 plasmid unnamed2, complete sequence) position: , mismatch: 9, identity: 0.71

tgaaagtaaattcaatacctacaacttttcc	CRISPR spacer
atcgcataaattcaatagctacatcttttgc	Protospacer
   . .*********** ***** ***** *

89. spacer 1.3|228075|31|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP034948 (Enterococcus faecium strain NM213 plasmid unnamed5, complete sequence) position: , mismatch: 9, identity: 0.71

tgaaagtaaattcaatacctacaacttttcc	CRISPR spacer
atcgcataaattcaatagctacatcttttgc	Protospacer
   . .*********** ***** ***** *

90. spacer 1.6|228275|30|NZ_CP007766|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP040452 (Halomonas sp. PA16-9 plasmid p_unnamed1, complete sequence) position: , mismatch: 9, identity: 0.7

aaaacgccttttgcactaactttaacttca	CRISPR spacer
tttttgccttttgcactcacttttactttg	Protospacer
    .************ ***** ****..

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site
DBSCAN-SWA_1	1623046 : 1631248	8	uncultured_Caudovirales_phage(33.33%)	NA	NA

Sequences of DBSCAN-SWA_1

Nucleotide sequences of DBSCAN-SWA_1

>NZ_CP007766|1623046:1631248|DBSCAN-SWA
TTTGAAAGTATATTTGGATAATAACGCAACAACCATGCTCGCACCAGAAGCTTATGAGCTAATGTTGCCGTATTTAAAAGAAAATTATGGTAACCCAAATAGCCTTCATCAATGGGGTAGCGCAACCCATCCTGCATTAAAACAAGCCATGGATAAGCTTTATGCAGGGCTTGGGGCAAGTGATTTAGATGATATCATCATAACATCTTGTGCTACTGAAAGCATTAATTGGGTGCTTAAAGGGGTGTATTTTGATAGAATTTTAAATAGCACTAGAAATGAAATCATTATTTCTAGCGTAGAACATCCTGCAGTTGCAGCCTGTGCTATGTTTTTAAAATCTTTAGGTGTTAAGGTTATAGAACTTGGCGTTGATCATGAAGGTGTTTGTAGTGTAAAAGATCTAAAAGAAGCTATTTCAGATAAAACTGCCTTAGTTAGCATTATGTGGGCAAATAACGAAACGGGTATGATTTTTCCTGTAAAAGAAATGGCTGAACTTGCTCATGAATATGGAGCATTATTTCACACAGATGCCACTCAAGCAGTAGGCAAGATAAAGGTTGATTTTGCAAAAGTTGGAGTGGATTTTGCTTCTTTTTCTGCACATAAATTTCATGGCCCAAAAGGAGTTGGTGGGCTTTATATCAAAAAAGATTTAGAGCTAACTCCACTTTTACATGGTGGAGAACATATGGGTGGTAGAAGAAGTGGGACTTTGAATGTGCCTTATATCATTGCCATGGCAGAAGCTTTAAGGATAGCTAATACCATGCTTGATTTTGAAAACTCACATATTAGAAGATTAAGAGACAAACTAGAAGATTTAATTTTAGCTATGCCTGATACAAGCGTAGTTGGAGATAGATCAAGAAGGGTTCCAAATACCATCTTAGCAAGCATTAAAGGTGTAGAAGGTGAGGCTATGCTTTGGGACTTAAATAAAAATGGCATAGCAGCAAGCACGGGATCAGCCTGTGCTAGTGAAGCACTTGAGAGCAATCCTATCATGGAAGCAATTGGTGCTGAAAATGATTTAGCGCATACTGCCCTAAGACTTTCTTTATCAAGATTTAACACAGAAGATGAGATTGATTATGCAGCAGAGCAGATTAAAAAAGCAACTCAAAGACTTAGAGCAATCTCTTGTACTTATGCGTATAAGCCACAAAATAATTAAAGGATAAATAATGGCAAAAAATAACTTAATCGGTGGATCAATTTGGGATGAATACTCCCAAAAAGTTCAAGATAGGATGAATAACCCAAAACATATGGGAGAATTCACACAAGATGATGCAAAAAAAGCCAATGCAAAACTTATTGTTGCTGATTTTGGTGCTGAAAGTTGTGGTGATGCGGTTAGGCTTTATTGGCTAGTAGATGAAAAAACAGATAAAATTATCGATGCTAAATTTAAAAGTTTTGGTTGTGGAACAGCCATTGCAAGTAGTGATACTATGGTAGAACTTTGCATAGGAAAAAGTGTTGATGAGGCAGTTAAAATTACAAATTTAGATGTGGAATTTGCTATGAGAGATGATCCACAAACTCCAGCTGTTCCACCTCAAAAAATGCATTGTTCTGTTATGGCTTATGATGTTATAAAACAAGCTGCAGCACAATATAAAGGGATTAATCCTGAAGATTTTGAAGATCAAATTATAGTTTGTGAGTGTGCTAGAGTTAGCCTTGGAACTATAAAAGAGGTTATAAGATTAAATGATTTAAAAAGCGTAGAAGAAATCACTCAATACACCAAAGCAGGCGCTTTTTGCAAATCATGCATAAAACCAGGCGGCCATGAAAAAAGAGAGTATTATTTGGTAGATATTTTGGCTGAAACTAGAGCTGAAATGGAGAGAGAAAAATTAAAAGAACAAAGTAAAGGTGATGTAGCTTTTGATGATATGACTATGGTTAAACAATTAAAAACTGTAGAAGCTGTTTTAGATAGCGAAGTAAGACCTATGTTGCATGGAGATGGCGGAGATTTAGAAGTGATTGATATACAAAAAGCACAAGGTGCTGCTATTGATATATATATTCGTTATCTTGGAGCTTGCAGTGGATGTTCAAGTGGAAGCGGTGCAACTTTATATGCAATAGAAAGTATTTTACAAGAAGAACTTAGTCCAAATATACGCGTTATTCCAGTTTAAGTAGTTTTGCTACTTAAACTTTTATATTAAAAATAAACCTTTTATGATAAAATAGTTATTTTATTAAAATTTAAAAAAGGTTTTTTATGCAAAGAATACAAACTCTTATAAAAAGTGAAACATTTCCAGGTGTTTTATTAATATTTTTTACCTTACTTGCTTTAATTTTACAAAATAGCTCTTTAACAGATCAATATACTAATTTTTTAAATATTCAATTTGGCTTTCAAGCAGGTGGTTTAGAAATTTTTAAACCCTTACTTTTGTGGATTAATGATGGCTTAATTGCTATATTTTTCTTTGCTATAGGACTTGAATTAAAATATGAAGTTACAAGAGGACAACTCAATAGCATAAAAGCTATGTCTTTGCCTGTATTTGCAGCACTTGGTGGTATGGTGGTTCCTGCTTTGATTTTTGCATTTTTTAATTATCATGATTCTTTTGCATTACAAGGCTGGGCTATACCAACAGCCACTGATGTTGCTTTTGCGGTTGGAATTTTAATGCTTTTAGGTAAAAAAATTCCAACTTCTTTAAAATTGTTTTTACTCTCTTTAGCTATTTTTGATGATTTAGGTGCAATTATTGTTATTGCCTTATTTTACACAAGCGAACTTTCAGTATTTGCTATGATTGCAGCTTTAGTATGTATGTTGGCACTTTATTTATTAAATCATTTTCATGTTACTAAAAAATCTTTTTATATTATTATAGCTATAATCTTTTGGATTAGCATGCTTAAAAGTGGCGTTCATGCGACTTTAGCAGGGGTAATTACTGCTTTATTTATTCCGCTTGAAACAAAAGGCGGTAAATCATTTCTAAAAGAAATTGAACATGATTTAGCTCCTTGGGTGAGTTATTTTATACTCCCAATATTTGCTTTTGCAAATGCTGGGGTAGATTTAAAAGATATGGATCCTAGCTTTATTTTTTCATCTGTTAGTTTGGGTATTATACTTGGTTTATTTTTAGGTAAACAAATAGGGGTATTTTTATTTTCCTATATAAGCATAAAACTAGGTTTAGCAAAATTACCTCAAAATGTAAATTTTAAACAACTTTATGGCGTTTGTATATTAACAGGTATTGGCTTTACTATGAGTTTTTTTATAGATGGTTTAGCTTATCAAAATAGTAATATTTTTGCATATTCTGATAAATTAGCTATTTTAATTGCTTCATTATTAAGTGCTGTAATTGGGTATATTTATTTAAAAATTATCTATGGATTTAAAAAATAATGATAAATAAATTTAAAAATTTAATCTCTATTGAAATTTTAGGGGGATTATTTTTACTTAGTGCAACAATACTAGCACTCATTTTAAAAAATAGCCCATATGGTGAAAGCTACATGGAATTTTTAAGTGTAGAAATGGGTTTTAAAGTAGGCACTTGGGAGCTTTTTAAACCTTCATTGTTATGGATTAATGATGGTCTTATTGCTATTTTTTTCTTTGCTATAGGACTTGAGCTAAAAAAAGAATTTATTCAAGGAGAATTTAAAACTATTAGCAATATAATCCTACCCTTAATAGCTGCAATTGGTGGTATAGTAGTCCCTGCTTTGATTTTTTGTATTATCAATTTTCATGATGCTTATGTTTTAAGAGGCTGGGCTATACCAACAGCCACTGACACAGCTTTTGCTTTAGTTATACTAGCTATGCTAAAACAGCGTATTCCTAGCTCTTTAAAAATATTTTTAGTATCTTTGGCTATTTTTGATGATGTAGGAGCTATTTTAATCATTGCTATTTTTTATACAGGAGAGCTTTCTAGTTTAGCTTTTTTTGTTGCATTTTGTTGTATTATGGGATTATTTTTACTCAATCGCTTAGGTAATGAAAGAAAATCATTTTATTATATACTTGGTGCTTTGCTTTGGCTTAGTGTATTAAAAAGCGGTGTGCATGCAACTTTAGCAGGTATTATCACAGCTTTGTTCATACCTGTTTATACCAAAAATAACCATGCCTTATTAGAAGAAATAGAACATGGGCTTAAATTTTGGATTGCTTTTGTTATTTTACCTATATTTGCTTTTGCAAATGCTGGAGTTGATCTTTCTAAAATAGAAACTCATATGCTTTTTAGCGGAGTGAGTGTAGGTATATTTTTAGGATTATTTGTTGGTAAACAACTAGGAGTATTTGGTTTTGCTTATATGGCGATTAAATTTAAGCTAGCAAAATTACCTAAAGATGCGAATTTTAAACAACTTTATGGCGTTTGTATATTAACAGGGATTGGCTTTACTATGAGTTTTTTTATAGATGCTCTTGCTTACGAAGTTAGTGATATATTTAATTTTGTAGATAACTTTGCCATATTATTAGCTTCTTTAGCTTCTGGAGTATTTGGATATTTTTACTTAAGATTTATAAAATAATTAAGCTTTATTTTAAGAAAATAAGATATAATTTTATCTTCATATTGGCCCATTCGTCTAGCGGTTAGGACATCGCCCTTTCACGGCGGTAACACGAGTTCGAGTCTCGTATGGGTCACCACCTTTAATTACTCTTTATTTTTATCCTCTTTAAAAGAAAATATAGGCAAAGATAATCCATAATGTATAGCTAATAATCTTGCTATAGTTCCTACAAACAATGAAGCAAGAATTACCCATAATTCATTAACACCAAAAATATAAAGTATATAATACAAAGCACCTGTTAATATAGCAACACCTGCATAAATTTCTTTTTGAAACACAAGCGGAATTCTTGCACACAATATATCTCTTAATATTCCACCAAAAACTCCTGTAATCACAGCTGAACTCACAGCCACTATAAAACCATAGCCCATTTGTATGGCAATTTGTGCACCCAAAACACTAAAAACAACCAAACCAATAGCATCTAAAACTAAAAATAATTTTTCAAGCTTTATAACATATTTAGCTATTTTTGTGGTAATCATCGCAGCAACACAGATTAAAATAACATATTCAGGAGTTTTAATCCAAGTTAAAGGATGATGATCAAGTAAAATATCTCTAATTGATCCTCCTCCAATAGCTGTAACAAGTGCTATAAATATTACCCCAAAAAGATCCATTTTGTGTCTTCCTGCAGCTATAGCCCCTGTCATTGCATCAACGGTAATTCCTATAATATAAAGTATAGTTAAGAGCATGATAAGTTTTTAAAAAACCCTTGTTTTAAACAAGGGTTAGTTTTTACTTACAATATTAATGATATTTTGAGCTACTTTTTTAGCAATAGGTTCAACAAATTCAGCAGGAGAAGTAAATCCTACACAAGAGCAATTAATCTCACCTAAAACATATTTATCTTTACCATTTTCATCAGTATCTAAAATAAAATCTGCAGTCCAAATCAACGGAATGTCATAATTTCCAAGTTTTGAGCGAATTTCTGGTAAAGTAGCTAAAAACCAATCAACCAATTCTTGCCAATCTTTTGGTTCATCATATCTATATTTTGCACCAGAAAAAAGTGTAGCAGAAAATGCATCAGCACCTTCAGCAGGTTTTTTATGTACTACATAAATTGGAGTATGATAAAGCATTAAAATTCTAATTTCACCTTCTTTAATACGCGGCAAAAAAGTCATATCTACAAGCATACCATTATCGCCTACTATATATTGCTCACAAAAATCCATAAATTCACCAAGTTCTCTTTCTTCTGTATGATTATCTTTTGCTTCTGTGCATTTGATTTTTGCATTTAAAGGCACGCTTGTAGCACCTGCTGGTAATTCATCTATCAATCTTACACGCCAAATTCCCTCACCCGTTGAGCCACGATTTTGTTTTAAAACCCTCTCACCCTTTGCTAAAGTCTTAACAAAATTTTCTTTAAAAGTTTTAATATCATAATATGCATAAGTATCTTCAGGAACTAAAGCTGTTTTGTTAAGCTTAGTAAGGGCATCTTTAGCACCATATCCTATCATTGCATCAGGATGTGGCATACCTATTACTCCATTTGCACAAAGTTTTCTTAGCATGTCAAAATATTCATTTTCTTCTTTTAAATTTCCTGGATTAATCCTTGAAACATAAGCATCGGCATTATTTTTTACATATTCATAGATTGCGTCTTTTTTTTCTACTTCAAAAAAAATAACCTCAGCATTCCAACCTTGTTCTTTTAAGGCATTTACCATAGGCATAGTATCTTTTCTATGTCCATCTTCGCCCTTATCACTTCCGCCTCTAACTTCGAAAAAAACAATATTTTTTTTCATACTATTTATCCTTTCTTTATAATTGATATAACAAAATAATAACCAAGTAAGTATTAAACTTTATTTATAAATTTTCTTTAAATTCCCCAAATTCGCACTTGCATTTAAAAGCAAAACATCAGCCATTACAACAGCCACCATAGCACTTACAACAACACTCCCTCTAATACCCACACAAGGATCATGTCTTCCTTTTAATTCATAAATTAAATTTTGACCATGTATATTTTGAGTTTGCTGGGGTAAAAATATAGAAGGAGTAGGCTTAAAATAAGTCTTAAGTTCTATAAAATCTCCATTTGATATTCCGCCTAAAATTCCTCCGCTATGATTGCTTAAAAATTTTCCATCTTTTAAAGCATCATTGTTTTTACTTCCATAAGTATAGCTACTTTTAACCCCACTACCAATTTCAACTGCTTTAACTGCATTTATACCCATAATAGCATGAGCAAGTTTTGAATCAAGCTTATCATACAAAGGCTCTCCAAGTCCTTTTATAGGGTTTTTAACCCTTGTAAAAACTCTAGCACCAATGCTGTCTTTGTTTTTTTTAGCCTTTGTTATCTCATCTTTAAAATCTTGTTCTATATTTTTATCCAAAGAATAAATTTCACTATTTTTAGCATATTCAAAATCAAATTCATCATTACTAAGTTTGCTCTCAAGCATACCCACGCCAAAAACCCCACTCATAATTTCAATACCAAATTCTTTCAAAAGCATCATTGCAACAGCACCTGCTGCTACTCTTGCAATACTTTCTCTAGCACTTGCTCTACCCCCACCTCTATGATCTTTAATGCCATATTTATGAAAATAAGTAAAATCTGCATGTCCTAAGCGAAAAACATCTTTTACATTATCATAGTCTTTAGAATGAGCATTTTCATTAAAAACCATTATGGCTATGGGAGTTCCTGTAGTATAGCCATTAAACACTCCGCTTAAAATTTGTGCCTTATCCTCTTCTTTTCTAGGACTTGAAAATTTGTTTTGACCAGGCTTTCTTTTATCAAGCATATCTTGTAAAAACACTGCATCAAATTTAACTCCCGCAGGCACCCCATCTATAACACAACCTACAGCAAGGCCGTGAGATTCTCCAAAACTTGTAAATTTAAATCTTGTTCCAAAAGTATTCATATTTTCCCCAATTTTTCCAAAGCAATCTTTGCACATTGTTGCTGAGCTTCTTTTTTACTTCCTGCTATTGATCTTGCTACTTCTATACCTTGAATTTTTACTGCAATTTCAAATTGTTTTTTATGATCAGGGCCAAAAGCTTTTACTACTATATATTCTGGTGTTCCTGCCATATGTGCTTGAGTAATTTCTTGCAATTTGGTTTTATAATCTTTAAACAAATTTTGTGTATCAATATGAGGATATACATCTTTAAGCAAATCAAGTGCGATATTTTTAGTTTTTTCAAAACCTATTTCCAAATACAAAGCACCCATTAATGCCTCAAAAGCATCAGAAAGTATAGAAGGTTTATTGCGACCATCGTTATTTTCCTCAGCAATAGACATAAAAATACATTCTCCAAGATTAAGCTTTTGTGCTAAATTTGCAAAAGATTTTTCATTAACCAAAGCCGCTCTTAATTTAGAAAGATTTCCTTCGGAGTCTTTTTGGAATTTAAAAAACAAAAACTCACCTACAATTAAATCCATCACCGCATCGCCTAAAAACTCTAATCTTTCATTGTTATAAGGCTTTTTATAACTTTTATGCGTCAAAGCTTCGATGAGCAATTGCTCGTTTTTAAAATGATATTTTAGTCTTTCTTGAAGTTTTTTAAGCAT

Protein sequences of DBSCAN-SWA_1

>NZ_CP007766|1623046:1631248|1623046_1624225_+|WP_044599381.1|DBSCAN-SWA
MKVYLDNNATTMLAPEAYELMLPYLKENYGNPNSLHQWGSATHPALKQAMDKLYAGLGASDLDDIIITSCATESINWVLKGVYFDRILNSTRNEIIISSVEHPAVAACAMFLKSLGVKVIELGVDHEGVCSVKDLKEAISDKTALVSIMWANNETGMIFPVKEMAELAHEYGALFHTDATQAVGKIKVDFAKVGVDFASFSAHKFHGPKGVGGLYIKKDLELTPLLHGGEHMGGRRSGTLNVPYIIAMAEALRIANTMLDFENSHIRRLRDKLEDLILAMPDTSVVGDRSRRVPNTILASIKGVEGEAMLWDLNKNGIAASTGSACASEALESNPIMEAIGAENDLAHTALRLSLSRFNTEDEIDYAAEQIKKATQRLRAISCTYAYKPQNN
>NZ_CP007766|1623046:1631248|1630579_1631248_-|WP_044599387.1|DBSCAN-SWA
MLKKLQERLKYHFKNEQLLIEALTHKSYKKPYNNERLEFLGDAVMDLIVGEFLFFKFQKDSEGNLSKLRAALVNEKSFANLAQKLNLGECIFMSIAEENNDGRNKPSILSDAFEALMGALYLEIGFEKTKNIALDLLKDVYPHIDTQNLFKDYKTKLQEITQAHMAGTPEYIVVKAFGPDHKKQFEIAVKIQGIEVARSIAGSKKEAQQQCAKIALEKLGKI
>NZ_CP007766|1623046:1631248|1624235_1625207_+|WP_044599382.1|DBSCAN-SWA
MAKNNLIGGSIWDEYSQKVQDRMNNPKHMGEFTQDDAKKANAKLIVADFGAESCGDAVRLYWLVDEKTDKIIDAKFKSFGCGTAIASSDTMVELCIGKSVDEAVKITNLDVEFAMRDDPQTPAVPPQKMHCSVMAYDVIKQAAAQYKGINPEDFEDQIIVCECARVSLGTIKEVIRLNDLKSVEEITQYTKAGAFCKSCIKPGGHEKREYYLVDILAETRAEMEREKLKEQSKGDVAFDDMTMVKQLKTVEAVLDSEVRPMLHGDGGDLEVIDIQKAQGAAIDIYIRYLGACSGCSSGSGATLYAIESILQEELSPNIRVIPV
>NZ_CP007766|1623046:1631248|1629497_1630583_-|WP_044599598.1|DBSCAN-SWA
MNTFGTRFKFTSFGESHGLAVGCVIDGVPAGVKFDAVFLQDMLDKRKPGQNKFSSPRKEEDKAQILSGVFNGYTTGTPIAIMVFNENAHSKDYDNVKDVFRLGHADFTYFHKYGIKDHRGGGRASARESIARVAAGAVAMMLLKEFGIEIMSGVFGVGMLESKLSNDEFDFEYAKNSEIYSLDKNIEQDFKDEITKAKKNKDSIGARVFTRVKNPIKGLGEPLYDKLDSKLAHAIMGINAVKAVEIGSGVKSSYTYGSKNNDALKDGKFLSNHSGGILGGISNGDFIELKTYFKPTPSIFLPQQTQNIHGQNLIYELKGRHDPCVGIRGSVVVSAMVAVVMADVLLLNASANLGNLKKIYK
>NZ_CP007766|1623046:1631248|1625293_1626454_+|WP_044599383.1|DBSCAN-SWA
MQRIQTLIKSETFPGVLLIFFTLLALILQNSSLTDQYTNFLNIQFGFQAGGLEIFKPLLLWINDGLIAIFFFAIGLELKYEVTRGQLNSIKAMSLPVFAALGGMVVPALIFAFFNYHDSFALQGWAIPTATDVAFAVGILMLLGKKIPTSLKLFLLSLAIFDDLGAIIVIALFYTSELSVFAMIAALVCMLALYLLNHFHVTKKSFYIIIAIIFWISMLKSGVHATLAGVITALFIPLETKGGKSFLKEIEHDLAPWVSYFILPIFAFANAGVDLKDMDPSFIFSSVSLGIILGLFLGKQIGVFLFSYISIKLGLAKLPQNVNFKQLYGVCILTGIGFTMSFFIDGLAYQNSNIFAYSDKLAILIASLLSAVIGYIYLKIIYGFKK
>NZ_CP007766|1623046:1631248|1627733_1628357_-|WP_044599385.1|DBSCAN-SWA
MLLTILYIIGITVDAMTGAIAAGRHKMDLFGVIFIALVTAIGGGSIRDILLDHHPLTWIKTPEYVILICVAAMITTKIAKYVIKLEKLFLVLDAIGLVVFSVLGAQIAIQMGYGFIVAVSSAVITGVFGGILRDILCARIPLVFQKEIYAGVAILTGALYYILYIFGVNELWVILASLFVGTIARLLAIHYGLSLPIFSFKEDKNKE
>NZ_CP007766|1623046:1631248|1626453_1627605_+|WP_044599384.1|DBSCAN-SWA
MINKFKNLISIEILGGLFLLSATILALILKNSPYGESYMEFLSVEMGFKVGTWELFKPSLLWINDGLIAIFFFAIGLELKKEFIQGEFKTISNIILPLIAAIGGIVVPALIFCIINFHDAYVLRGWAIPTATDTAFALVILAMLKQRIPSSLKIFLVSLAIFDDVGAILIIAIFYTGELSSLAFFVAFCCIMGLFLLNRLGNERKSFYYILGALLWLSVLKSGVHATLAGIITALFIPVYTKNNHALLEEIEHGLKFWIAFVILPIFAFANAGVDLSKIETHMLFSGVSVGIFLGLFVGKQLGVFGFAYMAIKFKLAKLPKDANFKQLYGVCILTGIGFTMSFFIDALAYEVSDIFNFVDNFAILLASLASGVFGYFYLRFIK
>NZ_CP007766|1623046:1631248|1628393_1629437_-|WP_044599386.1|DBSCAN-SWA
MKKNIVFFEVRGGSDKGEDGHRKDTMPMVNALKEQGWNAEVIFFEVEKKDAIYEYVKNNADAYVSRINPGNLKEENEYFDMLRKLCANGVIGMPHPDAMIGYGAKDALTKLNKTALVPEDTYAYYDIKTFKENFVKTLAKGERVLKQNRGSTGEGIWRVRLIDELPAGATSVPLNAKIKCTEAKDNHTEERELGEFMDFCEQYIVGDNGMLVDMTFLPRIKEGEIRILMLYHTPIYVVHKKPAEGADAFSATLFSGAKYRYDEPKDWQELVDWFLATLPEIRSKLGNYDIPLIWTADFILDTDENGKDKYVLGEINCSCVGFTSPAEFVEPIAKKVAQNIINIVSKN

Homologous phage analysis in the prophage region

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_044599381.1|1623046_1624225_+	cysteine desulfurase, NifS family	H7BUW1	unidentified_phage	4.5e-34	36.7
WP_044599382.1|1624235_1625207_+	Fe-S cluster assembly scaffold protein IscU	A0A1B1IT19	uncultured_Mediterranean_phage	6.6e-15	39.0
WP_044599383.1|1625293_1626454_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	8.0e-76	46.2
WP_044599384.1|1626453_1627605_+	Na+/H+ antiporter NhaA	A0A2H4J5W3	uncultured_Caudovirales_phage	4.8e-73	45.3
WP_044599385.1|1627733_1628357_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA
WP_044599386.1|1628393_1629437_-	Cj0069 family protein	NA	NA	NA	NA
WP_044599598.1|1629497_1630583_-	chorismate synthase	A0A291AU41	Pandoravirus	1.6e-65	42.4
WP_044599387.1|1630579_1631248_-	ribonuclease III	A0A2K9L8W0	Tupanvirus	7.5e-26	32.6