Overview of predicted results
Overview of the results
| Contig_ID | Contig_def | CRISPR array number | Contig Signature genes | Self targeting spacer number | Target MGE spacer number | Prophage number | Anti-CRISPR protein number |
|---|---|---|---|---|---|---|---|
| NZ_CP010013 | Helicobacter pylori strain Hp238 chromosome, complete genome | 2 crisprs | cas14j,cas2,DEDDh | 1 | 1 | 1 | 0 |
1. NZ_CP010013
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0
| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_CP010013_1 | 143579-143794 | Orphan |
NA
Consensus repeat of NZ_CP010013_1
|
3 spacers
spacers of NZ_CP010013_1
>1.1|143606|36|NZ_CP010013|CRT GCTTTTATTTGACTATTAGCGAGTTCTATCTCACTC >1.2|143669|36|NZ_CP010013|CRT GTTTTCTGTCTTTCTTGTTCTAACTCTATCCCACTC >1.3|143732|36|NZ_CP010013|CRT AGTTCTATCCCACTCTTGTTCGCTCTATCCCTAGCG |
CRISPR arrays and Neighbor proteins around NZ_CP010013_1
The CRISPR arrays of NZ_CP010013_1 >merge|NZ_CP010013|1|143579-143794|CRT TTAATTGTCTTTTGTTTTTCTTGTTCTGCTTTTATTTGACTATTAGCGAGTTCTATCTCACTCTTATTTGTCTTTTGTTTTTCTTGTTCTGTTTTCTGTCTTTCTTGTTCTAACTCTATCCCACTCTTATTTGTCTTTTGCTCTTCTTGTTCTAGTTCTATCCCACTCTTGTTCGCTCTATCCCTAGCGTTTTCAGCTTCCTTTTTTTCTTGTTCT >NZ_CP010013|1|1|143579-143794|CRT TTAATTGTCTTTTGTTTTTCTTGTTCT GCTTTTATTTGACTATTAGCGAGTTCTATCTCACTC TTATTTGTCTTTTGTTTTTCTTGTTCT GTTTTCTGTCTTTCTTGTTCTAACTCTATCCCACTC TTATTTGTCTTTTGCTCTTCTTGTTCT AGTTCTATCCCACTCTTGTTCGCTCTATCCCTAGCG TTTTCAGCTTCCTTTTTTTCTTGTTCT
>NZ_CP010013.1|WP_039704145.1|141509_142709_-|DUF874-family-protein MPVIRVLAMLATMMMKLVKTAKEKKVFKNVGVSIMGITFWEAIKDSIKKQIKKSDWICGNVKTADDYLKTHPNSWFNSAIGVATITTMLMNVCFADDQSKKEVAQAQKEAENARDRANKSGIELEQEEQKTEQEEQKTEQEEQKTEQEKQKTSNIQKDLVKEQKDMVKEQKDLVKEQKDLVKEQKDLVKEQKDLVKEQKDLVKEQKDLVKEQKDFIKDLEQNCKEKHGQFFIEKGGIKAGIGGITIEAEAKCKTPKPAKTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFKVTEEWQNENLKIRSKAQAKMLEMRNPQANLSPSQSLLFVQKIFADVNKEIEASANTGKKAEKVGYGYSKRM >NZ_CP010013.1|WP_039705061.1|140490_141417_+|radical-SAM-protein MAKENPPVVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIECMEEVIEVKTLIDAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLRGIKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDIDKILEGILSFSQIYQGQLVAEVLLIKGVNDSANNLKLIATFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSIAQAKKLISCGIDELLALISRRPLSTEEAPLILDPNAFKHLETLLNHKQITIKKVGSLEFYCAF >NZ_CP010013.1|WP_039704144.1|138290_140498_+|type-I-DNA-topoisomerase MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDHKELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGKLESYPRIVFHEITQNAILNALKTPRRIDMLKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDKEREIKAFKPLTYFTLDAYFESHLEAQLISYKGNKLKAQELIDGKKAQEIKNELEKESYTISSIIKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYMRTDSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSILEPNALKDYLKPEELKLYTLIYKRFLASQMQDALFENQSVVVACEKGEFKASGRKLLFDGYYKILGNDDKDKLLPNLKENDPIKLEKLESNAHVTEPPARYSEASLIKVLESLGIGRPSTYAPTISLLQNRDYIKVEKKQISALESAFKVMEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQVLKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKYVKQAENANDGAKQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNANEIIEGVKCPECGGDIALKKSRKGSFYGCNNYPKCRFLSNHKPINKRCEKCHYLMSERIYRKKKAHECIQCKERVFLEEDDG >NZ_CP010013.1|WP_039704143.1|136580_138125_-|flagellin-B MSFRINTNIAALTSHAVGVQNNRDLSSSLEKLSSGLRINKAADDSSGMAIADSLRSQSANLGQAIRNANDAIGMVQTADKAMDEQIKILDTIKTKAVQAAQDGQTLESRKALQSDIQRLLEELDNIANTTSFNGQQMLSGSFSNKEFQIGAYSNTTVKASIGSTSSDKIGHVRMETSSFSGEGMLASAAAQNLTEVGLNFKQVNGVNDYKIETVRISTSAGTGIGALSEIINRFSNTLGVRASYNVMATGGTPVQSGTVRELTINGVEIGTVNDVRKNDADGRLINAINSVKDRTGVEASLDIQGRINLHSIDGRAISVHAASASGQVFGGGNFAGISGTQHAVIGRLTLTRTDARDIIVSGVNFSHVGFHSAQGVAEYTVNLRAVRGVFDANVASAAGANANGAQAETNSQGIGAGVTSLKGAMIVMDMADSARTQLDKIRSDMGSVQMELVTTINNISVTQVNVKAAESQIRDVDFAEESANFSKYNILAQSGSFAMAQANAVQQNVLRLLQ >NZ_CP010013.1|WP_039704142.1|134634_136518_-|motility-associated-factor-glycosyltransferase-family-protein MDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSEIYMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEVIFIVLNLLDFSTEILENRLILLHASFCHYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQMIEINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVGALKNRDTAIIVSTGPSLNKQLPLLKEITPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIKKGVKQFSFRPFGYTNLFGLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDRDKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGTKEMPFKEVCEKIDKSKPKPPINLTYPTQSEQAKNLKIAKQKCEEIIKYANEKKTQVEEVFLKVAPFLEEVEKLHEEKKLEELDFKALENLSAEIDNIKELFDDKQFNSYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYAHKYWLFSLAGGIDCVIEAIKMALKEW >NZ_CP010013.1|WP_039704141.1|134313_134610_+|hypothetical-protein MTINTHYTPNFTQLQTLNNINNDATIKDRNQVEQDLQQSSVQDGFSQDNTQNAPDFDRLQALNAINNDGEIKDKSQVEKNLADGGNIPEIYSSLDTYA >NZ_CP010013.1|WP_001873656.1|133663_134293_+|hypothetical-protein MNTHTRGIDSNLIHSLQSISLSMFRKGFFGLYQGSISARIGTNQFVINKRNAVFDQLNENTLLVLHDKIDYRWKEASLDSPIHASVYREFLDAKFIAYARPPYSLAYSLRHNRLLPRDYLGYRSLGEEIAIFNPKDYDSWQERADTEILRQLQESKKYFVFIKGCGIFAYHRELSKLMEVFDLIENSCKVLRLGDLMDYCYNDDPRLSV >NZ_CP010013.1|WP_039704139.1|132603_133374_-|HrcA-family-transcriptional-regulator MNKKESLLDAFVKTYLQILEPISSKRLKELADLKISCATIRNYFQILSKEGMLYQAHSSGARLPTFKAFENYWQKSLRFETLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCTLGYSVKMEKFLLELVGRSVKEVRSIAASVNALSLARQLERLEYSNTQITRFNLMGLKTLLNSPLFFDILGGKVLERLKKPLHFIEPDCMLVTRPVEFQNKRMQLLCVGKLEYDYEGFFQTISKEE >NZ_CP010013.1|WP_039704138.1|132028_132604_-|nucleotide-exchange-factor-GrpE MKDEHNQEHDHLSQKEPEFCEKACACNEQQGEEMQEVSEKECEIKEDFELKYQEMREKYLRVHADFENAKKRLERDKSMALEYAYEKIALDLLPVIDALLGAHRSAIEVDKESALTKGLELTMEKLHEVLARHGIEGIECLEEFDPNFHNAIMQVKSEEKENGKIVQVLQQGYKYKGRVLRPAMVSIAKND >NZ_CP010013.1|WP_039704137.1|130135_131998_-|molecular-chaperone-DnaK MGKVIGIDLGTTNSAMAVYEGNEAKIIANKEGKNTTPSIVAFTDKGEILVGESAKRQAVTNPEKTIYSIKRIMGLMFNEDKAKEAEKRLPYKIVDRNGACAIEISGKVYTPQEISAKILMKLKEDAESYLGESVTEAVITVPAYFNDSQRKATKEAGTIAGLNVLRIINEPTSAALAYGLDKKESEKIMVYDLGGGTFDVTVLETGDNVVEVLATGGDAFLGGDDFDNRVIDFLASEFKSETGIEIKNDVMALQRLKEAAENAKKELSSAMETEINLPFITADATGPKHLVKKLTRAKFESLTEDLVEETISKIEGVIKDAGLTKNEISEVVMVGGSTRIPKVQERVKAFINKELNKSVNPDEVVAVGASIQGGVLKGDVKDVLLLDVTPLSLGIETLGGVMTKVIDRGTTIPAKKSQVFSTAEDNQPAVSIMVLQGERELARDNKSLGKFDLQGIAPAPRGVPQIEVTFDIDANGILTVSAQDKNTGKSQEIKISGSSGLSDSEIEKMVKDAELHKEEDARKKEVIEARNHADSLAHQTQKSLDEHKTNLNENDANEIQNAINALKDCVKNDNATKAELEDKTKALAQAAQKLGEAMANKNNAEQPKKKDDDVIDAEVE >NZ_CP010013.1|WP_039704147.1|144288_146715_-|pyruvate,-water-dikinase MRYIKFFKELNNKNVNLVGGKNASIGEMFQELVPIGIKVPDGFAITSEAYWYLLEQGGAKQKIIELLENVDATEIDVLKIRSKQIRELIFGTPFPSDLRDEIFQAYEILSQQYNMKEADVAVRSSATAEDLPDASFAGQQDTYLNIKGKTELIHYIKSCLASLFTDRAISYRASRGFDHLKVALSVGVQKMVRADKGSAGVMFSIDTETGFKDAVFITSAWGLGENVVGGTINPDEFYVFKPTLEQNKRPIIKRQLGNKTQKMVYAPRGSEHPTRNIKTTKKEWQSFSLSDEDVLILAKYAIEIEKHYSKEAKQYRPMDIEWAKDGDSGEIFIVQARPETVQSQKTKEESQVFEKFKFKNPNEKKEIILQGRAIGSKIGSGKVRIINDLEHMNSFKEGEILVTDNTDPDWEPCMKKASAVITNRGGRTCHAAIVAREIGVPAIVGVSGATDSLYTGMEITVSCAEGEEGYVYAGIYEHEIERVELSNMQETQTKIYINIGNPEKAFSFSQLPNHGVGLARMEMIILNQIKAHPLALVDLHHKKSVKEKNEIENLMAGYANPKDFFVKKIAEGIGMISAAFYPKPVIVRTSDFKSNEYMRMLGGSSYEPNEENPMLGYRGASRYYSESYNEAFSWECEALALVREEMGLTNMKVMIPFLRTIEEGKKVLEILRKNNLESGKNGLEIYIMCELPVNVILADDFLSLFDGFSIGSNDLTQLTLGVDRDSELVSHVFDERNEAMLKMFKKAIEACKRHNKYCGICGQAPSDYPEVTEFLVKEGITSISLNPDSVIPTWNAVAKLEKELKDHA >NZ_CP010013.1|WP_162474223.1|146900_147044_+|hypothetical-protein MYRWLFRRLLLNLFCMVFLQACLKPMSDPKAEKVDSQVQCGFGSKDC >NZ_CP010013.1|WP_039704148.1|147084_148923_+|threonine--tRNA-ligase MSAELIAVYKDEQIIDLESAKVLGLSDGIKALNGAEPIYFDDSPLALEVIRHSCAHLLAQSLKALYPDAKFFVGPVVEEGFYYDFKTASKISEEDLPKIEVKMKEFAKLKLAITKEILTREQALERFKGDELKHAVMSKISGDKFGVYQQGEFEDLCKGPHLPNTRFLNHFKLTKLAGAYLGGDENNEMLIRIYGIAFATKEGLKDYLFQIEEAKKRDHRKLGVELGLFSFDDEIGAGLPLWLPKGARLRKRIEDLLSKALLLRGYEPVKGPEILKSDVWKISGHYDNYKENMYFTTIDEQEYGIKPMNCVGHIKVYQSALHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKCDIFVEVLDKNDSLNKKVRLAEKQKIPMILVLGNEEVETEILSIRDREKQAQYKMPLKEFLNMVESKMQEVSF >NZ_CP010013.1|WP_000089219.1|148919_149531_+|translation-initiation-factor-IF-3 MSRNEVLLNGDINFKEVRCVGDNGEVYGIISSKEALNIAQNLGLDLVLISASAKPPVCKVMDYNKFRYQNEKKIKEAKKKQKQIEIKEIKLSTQIAQNDINYKVKHAREFIESNKHVKFKVVLKGRESQNSKAGLDVLFRVQTMMQDLANPEKEPKTEGRFVSWMFVPKAKEAPKNEKKTKENNPPFNRINLMKGENHAKNED >NZ_CP010013.1|WP_001125542.1|149511_149706_+|50S-ribosomal-protein-L35 MPKMKTNRGASKRFKVKKNLIKRGSAFKSHILTKKSPKRKANLNAPKHVHHTNAHSVMSLLCRA >NZ_CP010013.1|WP_001264172.1|149800_150151_+|50S-ribosomal-protein-L20 MRVKTGVVRRRRHKKVLKLARGFYSGRRKHFRKAKEQLERSMYYAFRDRKQKKREFRSLWVVRINAACRMHNTSYSRFMHALKVAGVELDRKVLADMAMNDMQAFESVLESVKEHL >NZ_CP010013.1|WP_039704149.1|150350_151211_+|outer-membrane-protein MKKSVIVGAVSLAMTSLLSAETPKQEKAIKTSPTKKGERNAAFIGIDYQLGMLSTTAQNCSHGNCNGNQSGAYGSNTPNMPTASNPTGGLTHGALGTRGYKGLSNQQYAINGFGFVVGYKHFFKKSPQFGMRYYGFFDFASSYYKYYTYNDYGMRDARKGSQNFMFGYGAGTDVLFNPAIFNRENLHFGFFLGVAIGGTSWGPTNYYFKDLADEYRGSFHPSNFQVLVNGGIRLGTKHQGFEIGLKIQTIRNNYYTASADNVPEGTTYRFTFHRPYAFYWRYIVSF >NZ_CP010013.1|WP_039704151.1|151565_151997_+|DUF1104-domain-containing-protein MKKLAFSLLFAGTFLGLFLNASDFKSMDNKQLLEQAGKVAPSEVPEFRAEVNKRLKAMKEEERKNYKADFKKAMDKNLASLSQEDRSKRKKEILEAIANKKKTMTMKEYRQMGLDLHDCACEGPFHDHEKKGKKGKKPSHHQH >NZ_CP010013.1|WP_039704152.1|152403_153264_+|hypothetical-protein MKRILFFLVATTFLLRAETDSATINTTIDPNVMFSESSTGNVKKDRKRVLKSMVNLEKERVKNFNQYSETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKNGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKLDAVTLKKMEDQAEKDTKAAFQKRSNGELESHTDSPEFISYSKKTQNASNSDLDSTTNANALKETASKEPETSSKKGKKSKKKRRLSKKERQQQALQQEFEKQISDSSKSEK >NZ_CP010013.1|WP_158413846.1|153785_153962_-|hypothetical-protein MKYSPTTPKNKSPNPIRARYEKACWCRLFYFDGKNTQRHQFDYRYSIEAPNRFSDWAS |
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| CRISPR_ID | CRISPR_location | CRISPR_type | Repeat_type | Spacer_info | Cas_protein_info | CRISPR-Cas_info | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NZ_CP010013_2 | 965032-965175 | Orphan |
I-B
Consensus repeat of NZ_CP010013_2
|
2 spacers
spacers of NZ_CP010013_2
>2.1|965059|30|NZ_CP010013|PILER-CR AGCGCTCAATCTGTTTTTGAAAACAGCAAT >2.2|965116|33|NZ_CP010013|PILER-CR GACAATACAGGTTTAAACTTTGATAACGACACC |
CRISPR arrays and Neighbor proteins around NZ_CP010013_2
The CRISPR arrays of NZ_CP010013_2 >merge|NZ_CP010013|2|965032-965175|PILER-CR TTCAATCAAGGGACTTACAATTTTAATAGCGCTCAATCTGTTTTTGAAAACAGCAATTTCAATCAAGGCACTTATAGCTTTACTGACAATACAGGTTTAAACTTTGATAACGACACCTTCAATCAAGGGACTTACAACTTTAAT >NZ_CP010013|2|1|965032-965175|PILER-CR TTCAATCAAGGGACTTACAATTTTAAT AGCGCTCAATCTGTTTTTGAAAACAGCAAT TTCAATCAAGGCACTTATAGCTTTACT GACAATACAGGTTTAAACTTTGATAACGACACC TTCAATCAAGGGACTTACAACTTTAAT
>NZ_CP010013.1|WP_039704670.1|963113_964112_+|type-I-glyceraldehyde-3-phosphate-dehydrogenase MKIFINGFGRIGRCVLRAILERSDTNSHLEVIGINDPANWEILAYLLEHDSVHGLLDKEAHYSNHKLIIGSLEIPVFNSIKDLRGVDVIIECSGKFLEPKVLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHSLYQNQVIVSNASCTTNAIAPICAILDKAFGIKEGMLTTIHSYTSDQKLIDLAHPFNKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKALKEPINDLLVEASKGVLKGVLEIDLKERVSSDFISNPSSVIIAPDLTFTLENMVKIMGWYDNEWGYSHRLVDMAQFMYHY >NZ_CP010013.1|WP_021303103.1|962277_962970_-|Bax-inhibitor-1/YccA-family-protein MALYDRANSHNAYAENSLLHESELVGFVKTTYKFFAGSLLLATIGALLGLMNFQAVVQYKWVFFIAEIAALFGLMFSKSKPGLNLFMLFAFTSLSGVTLVPLLGMVIAKAGLGAIWQALGMTTIVFGLMSVYALKTKNDLANMGKMLFIALIVVLVCSLINLFLGSPMFQVVIAGASAILFSLYIAYDTQNIVKGMYDSPIDAAVDLYLDFLNVFISILQIIGIFSDRDK >NZ_CP010013.1|WP_039704669.1|958921_962179_-|carbamoyl-phosphate-synthase-large-subunit MPKRTDISNILLIGSGPIVIGQACEFDYSGTQSCKTLKSLGYRVILINSNPATVMTDPEFSHQTYIQPITPENIAAIIKKEKIDAILPTMGGQTALNAVMQMHQKGMLEGVELLGAKIEAIKKGEDRQAFKEAMLKIGMDLPKGRYAYSELEALEAINEIGFPAIIRASFTLAGGGSGVAYNIEEFQELAKNALDASPINEILIEESLLGWKEYEMEVIRDNKDNCIIVCCIENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDASFAILREIGVDTGGSNVQFAIHPETLRMVVIEMNPRVSRSSALASKATGFPIAKVATMLAVGFSLDEIQNDITNTPASFEPSLDYIVVKIPRFAFEKFAGVSSTLGTSMKSIGEVMAIGGNFLEALQKALCSLENNWLGFESLSKDLEMIKKEIRRPNFKRLLYIADAFRLGVCVDEVFELCQIDRWFLSQIQKLVKAEESINSSVLTDAKKLRGLKNLGFSDARIAAKIKENENLEVSPFEVELARMNLQIVPNFEEVDTCAAEFLSLTPYLYSTYAPNPLPPIENKQEKQEKKILIIGSGPNRIGQGIEFDYCCVHASFALKDLNIKSVMLNCNPETVSTDYDISDTLYFEPIHFECVKSIIQRERVDGIIVHFGGQTPLKLAKDLAKMQAPIIGTPFKVIDIAEDREKFSLFLKELDIKQPENGMAKSVDEAYSIANVIGFPIIVRPSYVLGGQHMQILENIEELHHYLESVTHALEVSPKNPLLIDKFLEKAVELDVDAICDKKEVYIAGILQHIEEAGIHSGDSACFIPSTLSPKILDEIERVSAKIALHLGVVGLLNIQFAVHQNSLYLIEVNPRASRTVPFLSKALGVPLAKVATRVMVSEDLKEALKFYDKKNIVGYSKGVYKPKMPHFVALKEAVFPFNKLYGSDLILGPEMKSTGEVMGIARSLGLAFFKAQTACFNPIKNKGLIFVSIKDKDKEEACVLMKRLVQLGFELCATEGTHKALEKAGVESLKVLKISEGRPNVMDLMMNGEISMAINTSDHKSQDDAKLIRASVLKNHVSYFTTLSTIEVLILALEESSKEDELLALQDYLV >NZ_CP010013.1|WP_039704668.1|958490_958922_-|Sua5-YciO-YrdC-YwlC-family-protein MALVYLAQSDTTIGLLSKDSERLNALKNRPKNQSVLIESADFATLKSLVRAPNAFKNLIRRSAKITFIYPNSKAVRVVRGRHGDFLKRFKTLYSTSANLTQCAYDKEIASKLADVVVSDERGLFESSSSKIFRLYKDKKVRVR >NZ_CP010013.1|WP_039705104.1|954083_955628_-|outer-membrane-beta-barrel-protein-HofG MRQEKYFLTSSLSLLSFLLCPAEAFDYRFSGRVENFSKIGFNNSQINTKKGIYPTESFIDIVTLAQVKVNLLPKGIENHRLSFSLGGAIAAIPYDKTKNDINQANGKIFGSIVENFIGGYHGYFFNKYLGPAYAGTSQSASYHARPYVVDTAFLRYDYKDVFGFKAGRYEANIDFMSGSNQGWEVYYQPYKTETQRLRFWWWSSFGRGLAFNSWIYEFFATVPYLKKGGNPSNSNDFINYGWHGITTTYSYKGLDAQFFYYFAPKTYNAPGFKLVYDTNRNFENVGFRSQSMIMTTFPLYYRGWYNPETNTYSLEDSTPYGSLLGRNGVTLNIRQVFWWDNFNWSIGFYNTFGNSDAFLGSHTMPRGNNTSYISNEISVTTRHAGMIGYDFWDNTAYDGLADAITNANTFTFYTSVGGIHKRFAWHVFGRISHANKNALGQLGRANEYSLQFNASYAFTESVFLNFRITYYGARINKGYQVGYFGAPKFNNPDGDFSANYQDRSYMMTNLTLKF >NZ_CP010013.1|WP_039704667.1|951960_953553_+|Hop-family-adhesin-AlpB MKQNLKPFKMIKENLMTQSQKVRFLAPLSLALSLSFNPVGAEEDGGFMTFGYELGQVVQQVKNPGKIKAEELAGLLNSNTTNNTNINIAGTGGNVAGTLGNLFMNQLGNLIDLYPTLDTKNIHQCNSGSSGGATTTATTSSSTNNSPCFQGNLSLYNEMVSSIKTLSQNLKNNIFQGNNNTTSANLSNQLSELNTASVYLTYMNSFLNANNQAGGIFQNNTNQVYGSNVTAQQIAYVLKQASVTMGPSGNGGAAGAFLDAALAQHVFNSANAGNDLSAKEFTSLVQNIVDTSQNALTLANNANISNSTGYQVSYGGNIDQARSTQLLNNTTNTLAKVTALNNELKANPWLGNFAAGNSSQVNAFNGFITKIGYKQFFGENKNVGLRYYGFFSYNGAGVGNGPTYNQVNLLTYGVGTDVLYNVFSRSFGSRSLNAGFFGGIQLAGDTYISTLRNSPQLANRPTATKFQFLFDVGLRMNFGILKKDLKSHNQHSIEIGVQVPTIYNTYYKAGGAEVKYYRPYSVYWVYGYAF >NZ_CP010013.1|WP_039704666.1|950391_951939_+|Hop-family-adhesin-AlpA MIKKNRTLFLSLALCASISYAEDDGGFFTVGYQLGQVMQDVQNPGGTKRDELARELNADVTNNILNNNTGGNVAGALSNAFSQYLYSLLGAYPEKLNGNDVSANALLGGAVGSGTCAAAGTASGNSLTTQSACTAAGYYWLPSLSDRVLSTIGSQTNYGTNTNFPNMQQQLTYLNAANVFFNAMNKALETKNGASGTSGATGQNGQTYPQKAIQYLQNQQNILNNAANLLKQDELLLEAFNSAVAANIGNKEFNSAVFTGLVQGIIDQSQSVYNELNKDPISGSAVNSAEINSNQANAVQGRANQLSNALYNAQVTLDKINALNNQVRSMPYLPQFRAGNSRATNILNGFYTKVGYKQFFGKKRNIGLRYYGFFSYNGASVGFRSTQNNVGLYTYGVGTDVLYNIFSRSYQNRSVDMGFFSGIQLAGETFQSTLRDDPNVKLHGKINNTHFQFLFDFGMRMNFGKLDGKSNRHNQHTVEFGVVVPTIYNTYYKSAGTTVKYFRPYSVYWSYGYSF >NZ_CP010013.1|WP_039704665.1|947824_949855_+|ATP-dependent-helicase MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTNKASNEMIARVAKYSKSSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKNALTDDDKKPYTSQHLYTLYSLYTNALKQEDFSAWLSNKNPEHTPYAAFYENILDEFENTKKKHNYIDYNDLLLLFKQAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYDQSIYAFNGADISIISNFTQKYKNARVFTLTKNYRSSKEILDLANQVIQRNERIYPKNLEVVKSGHFNKPALLNYNDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVPSKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSHISDIGSNTAKDIHEALMLLGNGDLKLALIQPDKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPKISLNGAKMLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTHLLKERSKNKDGSYNEFKKLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKDVYIVDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHKPSVFLYEAGLLKPDLK >NZ_CP010013.1|WP_039704664.1|946669_947815_+|class-I-SAM-dependent-methyltransferase MESFLYQLDIKTLGQVFTPKNIVDFMLTLKHNHGSVLEPSAGDGSFLKRLKKAVGIEIDPKICPKNALCMDFFDYPLENQFDTIIGNPPYVKHKDIAPSTKEKLHYSLFDERSNLYLFFIEKAIKHLKPKGELIFITPRDFLKSTSSVKLNELIYKEGTITHFFELGDQKVFPNAMPNCVIFRFCKGNFSRITNDCLQFLCKKGILYFLNQSYTQKLSEVFKVKVGAVSGCDKIFKNEKYGNLEFVTSITKRTNVLEKMVFVNEPNDYLLQHKDSLMQRKIKKFNEANWYKWGRMHHISPKKRIYVNTKTRQKNPFFIHQCPNYDGSILALFPYNQNLNLQNLCDKLNAINWQELGFVCDGRFLFSQRSLENALLPKDFFN >NZ_CP010013.1|WP_039704663.1|946065_946701_+|hypothetical-protein MIPTQLNEIAEFSKTNPYHLSQPLQDGRLNPSVNEEEILNTIKHSFPIQLPKAREWWDFSFEENDIFYPVNIKTTTTKTADNLNCKLGIYYALCGLVPEFNNEIAWEKYFQKLHKDLGKNTDRDYYFLIINKNDPKDVFINSLKGIQTLQPNGNNLPFQCKWDNNREIIQRDFDGSKNFILSALAESVKLRANIYLAFKEFFGEFFVSIRH >NZ_CP010013.1|WP_039704385.1|971427_972528_+|Hop-family-outer-membrane-protein-HopJ/HopK MQKTLFSFLSLSLSLSFCIAEENGAYASVGFEYSISHAIQHNNPFFNQERIQIISNAQNKIYKLNQVKNEITSMPNTFAYINNNLKNHSQLTPTEMQAEKYYLQSTFQNIEKIVMLSGGVASNPKLVQALEKIQEPTNSPLELAENLKNLEVQFNQSQNRMLSSLSSQIAQISNSLNALDPSSYSKNISNMYGVTLNVGYKHFFTKKKNQGFRYYLFYDYGYTDFGFVGNGFDGLGKMNNHLYGLGIDYLYNFIDNLQKHSSVGFYAGFALAGSSWVGSGLSMWVSETDFINHYLTGYQAKMHTSFFQIPLNFGVRVNVNRHNGFEMGLKIPLAVNSFYETHGKGLNTSLFFKRLVVFNVSYVYSF >NZ_CP010013.1|WP_001115888.1|972584_972791_-|4-oxalocrotonate-tautomerase-family-protein MPFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASVVVIIDEVDSNNYGLGGESVHHLRQKN >NZ_CP010013.1|WP_039704672.1|972918_973500_+|recombination-protein-RecR MNTYKNSLNHFLNLVDCLEKIPNVGKKSAFKIAYHLGLENPYLALKITHALENALENLKTCASCNALSESEVCEICSDESRQNSQLCMVLHPRDVFILEDLKDFLGRYYVLNSIEEVDFNALEKRLIEENIKEIIFAFPPTLANDSLMLYIEDKLQHFQLTFTKIAQGVPTGVNFENIDSVSLSKAFNSRIKA >NZ_CP010013.1|WP_039704673.1|973496_974642_+|tRNA-pseudouridine(13)-synthase-TruD MNLSFMPLLHAYNHASIDFHFNSSARDFCVHEVPLYDFSNTGEHAVIQVRKSGLSTLEMLQIFSQILGVRIAELGYAGLKDKNALTIQFVSLPKKYAPLLEKNTHNLQERNLKILSLNYHHNKIKLGHLKGNRFFMRFKKMTPLNAQKTEQVLEQIAQFGMPNYFGPQRFGKFNDNHQEGLKILQNQTKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIISAFSVKENLEFFKQKNLSVNSDTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKKALYAKNLSLEIEKEFQHNLLNSHTKTLGSRRFFWVFAENITSQYVKEKAQFELGFYLPKGSYASALLKEIKHEKGENNDEF >NZ_CP010013.1|WP_162474229.1|974610_975561_+|zinc-metalloprotease-HtpX MRKEKIMTNFEKIIAQNRLKTNAVLATYCVIFAFIGLLVDVIRINANDLGIALFKLMTFQIFPTITIIMFLVAFVIIVVCIQNFSSIMLSGDEYKLIDSSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIIKAPYMNAFASGWNESNSFIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLAANFSVYFFMGNRKNSGANLARMILLVLQIVLPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYKENDYKGIDTNSTRSAAYLFSAEMFSTHPSIKNRIQSLSRRVI >NZ_CP010013.1|WP_000426951.1|975561_976104_+|GTP-cyclohydrolase-I-FolE MENFFNQFFENIGEDKNREGLKETPKRVQELWKFLYKGYKEDPKVALKSAYFQGVCDEMIVAQNIEFYSTCEHHLLPFLGNISLGYIPKEKIVGISAIAKLIEIYSRRLQIQERLTTQIAETFDEIIEPRGVIVVCEAKHLCMSMQGVQKQNAIIKTSVLKGLFKKDPKTRAEFMQLLKS >NZ_CP010013.1|WP_039704675.1|976119_977031_+|polyprenyl-synthetase-family-protein MNNPNLSFYYNECERFESFLNHHHLHLESFHPYLEKAFFEMVLNGGKRFRPKLFLAVLCALVGKKDYSNQQTEYFKIALSIECLHTYSLIHDDLPCMDNAALRRNHPTLHAKYDETTAVLIGDALNTYSFELLSNSLLESRIIVELIKILSANGGIKGMILGQALDCYFENTPLNLEQLTFLHEHKTAKLISASLMMGLVASGIKDEELFKWLQAFGLKMGLCFQVLDDIIDVTQDEEESGKTTHLDGVKNSFVNLLGLEEASGYAQTLKTEVLDDLNLLKPAYPLLQENLNALLNTLFKGET >NZ_CP010013.1|WP_000722456.1|977027_977831_+|5'/3'-nucleotidase-SurE MKKILLTNDDGYHAKGIKALEQALEEMAEIYVVAPKHEKSACSQCITITAPLRAEKIKGKEGRHYRIDDGTPSDCVYLAINELFKHVCFDLVISGINLGSNMGEDTIYSGTVAGAIEGTIQGVPSIAISQILSNKNKNTPLSFDLAQKIIQDLVQNIFTNGYPLKGRKLLNVNVPNCSLQEYKGECITPKGYRLYKKEVHKRTDPKNESYFWLGLHPLEWQKRENEDRLSDFDAIASNHVSITPLNLDLTSYDDLKNLESWHKGMLK >NZ_CP010013.1|WP_000041797.1|977827_978487_+|hypothetical-protein MSKNHRLAFLGLIVGVLFFFSACQHRLHMGYYSEVTGDYLFNYNSTIVVAYDRSDAMTSYYINVIVYELQKLGFYNVFTQAEFPLDKAKNVIYARIVRNISAVPFYQYNYQLIDQVNKPCYFLGGQFYCSQTPTDYYAINGFSEQILMSANSHFILDWYDVVLQKRVLYVDGSVSGRTCGYQMLYRDLIKSTIKRIDFNRPERYYYNLRLPLYQPCYRE >NZ_CP010013.1|WP_039704676.1|978490_979093_+|6-pyruvoyl-tetrahydropterin-synthase-family-protein MVIRRLYQFCASHVVRNCSSVKCAQNIHGHNYEVEVFIETNRLDSANMALDFGLMQQEMQVFIESFDHAHHFWDKESDEFQRFIENHCVRYVKCSFNLSAESYALMFLYYLTRILQKSVFSNNEGELKISSVRVHETKNGYAESFLKDLENPHFKSLVHQNCVSFSQGIRKLWHDKDFFNKIISDEKQCFFHAKPPHQIP |
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| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_ID | Protospacer_location | Mismatch | Identity |
|---|---|---|---|---|---|---|---|
| NZ_CP010013_1 | 1.3|143732|36|NZ_CP010013|CRT | 143732-143767 | 36 | NZ_CP010013.1 | 142339-142374 | 0 | 1.0 |
1. spacer 1.3|143732|36|NZ_CP010013|CRT matches to position: 142339-142374, mismatch: 0, identity: 1.0
agttctatcccactcttgttcgctctatccctagcg CRISPR spacer agttctatcccactcttgttcgctctatccctagcg Protospacer ************************************
| CRISPR_ID | Spacer_Info | Spacer_region | Spacer_length | Hit_phage_ID | Hit_phage_def | Protospacer_location | Mismatch | Identity |
|---|---|---|---|---|---|---|---|---|
| NZ_CP010013_2 | 2.1|965059|30|NZ_CP010013|PILER-CR | 965059-965088 | 30 | NZ_CP045274 | Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence | 87743-87772 | 8 | 0.733 |
| NZ_CP010013_2 | 2.1|965059|30|NZ_CP010013|PILER-CR | 965059-965088 | 30 | NZ_CP009921 | Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence | 185364-185393 | 8 | 0.733 |
| NZ_CP010013_2 | 2.1|965059|30|NZ_CP010013|PILER-CR | 965059-965088 | 30 | NZ_CP032533 | Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence | 27068-27097 | 8 | 0.733 |
| NZ_CP010013_2 | 2.1|965059|30|NZ_CP010013|PILER-CR | 965059-965088 | 30 | NZ_CP035095 | Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence | 291583-291612 | 8 | 0.733 |
| NZ_CP010013_2 | 2.1|965059|30|NZ_CP010013|PILER-CR | 965059-965088 | 30 | NZ_CP022523 | Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence | 752261-752290 | 9 | 0.7 |
| NZ_CP010013_2 | 2.1|965059|30|NZ_CP010013|PILER-CR | 965059-965088 | 30 | NC_028671 | Enterococcus phage vB_EfaS_IME197, complete genome | 17499-17528 | 9 | 0.7 |
1. spacer 2.1|965059|30|NZ_CP010013|PILER-CR matches to NZ_CP045274 (Bacillus megaterium strain FDU301 plasmid pFDU301B, complete sequence) position: , mismatch: 8, identity: 0.733
agcgctcaatctgtttttgaaaacagcaat CRISPR spacer tttgaccaatctgtttttgaaaactgtaaa Protospacer .* .****************** *.**
2. spacer 2.1|965059|30|NZ_CP010013|PILER-CR matches to NZ_CP009921 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid pBMV_2, complete sequence) position: , mismatch: 8, identity: 0.733
agcgctcaatctgtttttgaaaacagcaat CRISPR spacer tttgaccaatctgtttttgaaaactgtaaa Protospacer .* .****************** *.**
3. spacer 2.1|965059|30|NZ_CP010013|PILER-CR matches to NZ_CP032533 (Bacillus megaterium NCT-2 plasmid pNCT2_5, complete sequence) position: , mismatch: 8, identity: 0.733
agcgctcaatctgtttttgaaaacagcaat CRISPR spacer tttgaccaatctgtttttgaaaactgtaaa Protospacer .* .****************** *.**
4. spacer 2.1|965059|30|NZ_CP010013|PILER-CR matches to NZ_CP035095 (Bacillus megaterium NBRC 15308 = ATCC 14581 plasmid unnamed1, complete sequence) position: , mismatch: 8, identity: 0.733
agcgctcaatctgtttttgaaaacagcaat CRISPR spacer tttgaccaatctgtttttgaaaactgtaaa Protospacer .* .****************** *.**
5. spacer 2.1|965059|30|NZ_CP010013|PILER-CR matches to NZ_CP022523 (Pseudoalteromonas sp. NC201 plasmid pNC201, complete sequence) position: , mismatch: 9, identity: 0.7
agcgctcaatctgtttttgaaaacagcaat CRISPR spacer tcaaggcaatctccttttgaaaacagcaac Protospacer . ****** .***************.
6. spacer 2.1|965059|30|NZ_CP010013|PILER-CR matches to NC_028671 (Enterococcus phage vB_EfaS_IME197, complete genome) position: , mismatch: 9, identity: 0.7
agcgctcaatctgtttttgaaaacagcaat CRISPR spacer gatgctcaatctgttttagaaaaaagtgga Protospacer ...************** ***** **...
| Region | Region Position | Protein_number | Hit_taxonomy | Key_proteins | Att_site | Prophage annotation | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DBSCAN-SWA_1 |
196507 : 204721
Sequences of DBSCAN-SWA_1
Nucleotide sequences of DBSCAN-SWA_1 >NZ_CP010013|196507:204721|DBSCAN-SWA TATCGTTGATCCTGGCGAGTTTATAGAATTTAAAAGCGGTAAAAAAATAGCAAAATGGTATAGCGATGGACTGACTAAAACAAAATCAGCCAAAGAGCGTCAAATCTGGAGGAGTAAAACATTTCCAGGATTTGCAAAGGCGATGGCAGAGCAGTGGGGGGAGTTTGTAAAAAATGAGATGTTTAAAAAGGTGAAAAATGAAAGTTTATTTAAGGAAAGTTGATAACCAATGCATCAACAACAAACGAATTAGTATTACAAAAGGTGTTTTAGAGCATTTTTTTGATAACACCAACAACCAAGATGAAGTGGATATGAAAGGTATCTTATCTAATTATAACGATAAAGTTAGCATTCTCTTAGCAACAGATCCTAGATTTGGTGGAGGAATTAAAAGAATCATCAATGCAGAATCTAATAAAATAAAAGAAAACCGATTAGATTATGAGTTAAAGGCTGATGATATTCTGCTTTTTACTTACATATCTCCCAAAAAATACACATTAGAAATTATTTTACCCACTGATACAAGATACAATGTTTTAAATGGCTTAATCAGTAATAGGCATTTATTGGTTTTTAGCGAGAATGAAACAAAATCTCTGAGTGATAATAAAATAGACGGAAGTGTTAGAATAGATGGGGGAAAAAATATCATTCTTTATGGTGTTCCTGGTAGCGGCAAAAGTTATACTTTACAAAGAGATTACTGCAATGATAATAGTGTGGTAGAAAAGATAGTGTTCCATCCTGATTATTCTTATAGTGATTTTGTGGGACAGATTATGCCAAGTGTGGATGATAGCGGTATAGTCAGTTATAAATTTAATCCTGGACCTTTTACAAACATCCTAAAAAAAGCGTATCATAACCCACAAATTAAGCATGTTCTAGTGATTGATGAAATCAATCGTGGTAACGCGCCTGCCATATTTGGAGAAATTTTTCAGCTTCTTGACAGGCTTAAACATGACAAAAATGGCTTTAAAAAAGGCTCTAGTGAGTATGCTATCAATAATATGGATATTGCAAATATTGTCCATAGCGATAAAAATGCAAGTATAAGAATCCCATCAAATTTATGGATAATCGCTACAATGAATACGAGCGATCAAAATGTATTCACGCTAGACACTGCTTTTCAGCGTAGATTTTCTATGCAGCTCATTGAAAATTCCTTTGAAAATGTTGATGATGATTTTAAAAATATGAAAATTTTAGATACTGATATTACTTGGCAAAAATTTTGCACCACCATCAATGAAAAAATAGCTCAAAATAACGAGGGATTGAGTTCTATGGAGGATAAGCGGTTTGGCGTTTATTTTGTGAATATTGATGATCTAAAGAGCAAAGAAAATTTTGCGCATAAAGTCATCAAATACCTTTGGGATGATGTCTTTAAATTTGACAGAAACATCATATTTGATACTATAAAATTTAATACGCTTGAAGCTGTTGTAAAGAATTTTACCAAAGAAAAAGGTAGAACCCAATTTGATATTTTTAGCGATGGCGTGAAAGAACTTTTATTTAATGCTTAATCTAAAAGAGCGCTGTTTTAGAGACAACGAATTGAGCGACAATTTTGTAGGTATTAGAAGCGTCAATAACGACTTACAAATCTGTTTCCCGCTAGGATTTGATATAAGCGATGATAAAAACATTAGATCAGATGTAAAAAAGCTTATTTCTGTTCTTTTAGAATACAATAAAGCAATTGCATGTGAAAATTTTTTAAATAATAAAAATGAGATTATAAGATCAAACTTTCCACTCACAGCGTATAAAAATGTCATAGAATATTTTTTATCGCATGGTTATTATGCAGAGAATAAAAGCTATTATGAAAACAGCACAAAAGGTAAAATAAATTTTTCCAAAACGATGAAGAAAAACAGACCCATTATTCAAAATCTTAACAATAAAAACTCTTTTATCTACACTCGTTTTCAAGTTAAAAAGGAAATGATCAATGAAAATGAATTGATAACAGCGATAAACAAATACTGTGTGCATGAAGTGTTTTCTAAATTTGGCTTTGTGTTTAGCTCGTTTATGCCACCAAAATTCAAACTACCTACTGATAAAAATTATTGCATTTATCTGCTTGAAAATAGGCTCAACAACACATTTAATGATGACAGGAAAATCCTTTTTCAATCTATGAAAAATATTCTTTTACAAGATGATAATATTTTGGATAAGACTGATTTTAAATTTGGAACATATAATTTTTATGTTGTTTGGGAAAGAATGATAGACAGGGCATTTGGTATAAAAAATAAAGAAGTTTATTTTCCTAAAACAAAATGGAATTTGCGGCGTTCTAATCAAAATCCTGATTACTTATTGCAACCAGATAGCATCATGCTGTTTGGCGATAAAATTTACATATTAGATGCAAAATATTATAAATATGGCATAAGTGGGGTTGCAAGCGATTTGCCCAGTAGCGCATCCATCATAAAACAGATTGTTTATGGCGAATATGCAGCAAAACTAGAAACACAAAAAGAGATTTACAATGTCTTTTTAATGCCTTTTAACAGTTCTAACAATCCGCTAAAATTGAGTAATATTTTTGAAAATATAGGCTTTGCAAATGGAGAGTGGAGAGACAATCTAAAACAACATGAAAATATACAAGGAATTTTAATAGATACTAAATTTTTAATGCAAAATTATAATAAGAAATCCAATAATCTTTTAAAGTTACTGGTAAAAAATGTGGAAGAAACTAAAAGATAATTTTTAAAAATTTTTAATTTAAAATCAAATCTAAAACCACAAAACAAAATTTAAAACCCCCATTTTTTAATCAAACCTACAATGAGCGTTCTATACCATCAGCGCTTAAAGGGGTGTTGGCTTTTAAGAACTTTGATGCCTTTTGGCCTAAAATTTCTTTATAAAATTTAGGGTGTAAGCCAAGGTTGGGGCGTAAGGCCTTGATATTATCGCTAGTCAATGCTTCACCTTTTTGAATATCCTTAATGACAAATAAAGAGCGCATAAAGAATCTCCGCTCCTCTAAAGTCTTTGGATTGATTTTAGGCTCTTCTTCGCCCAAGGCTAAAACGCTTTGTTTGATGGCTTCAACCATGCTTTTAAATTCGTTAAAATCCATGCTAAAAGCGCTGTCTGGGGTTTGTAAGGATTTGTTTAAAATGAAATGCTTTTCTATCATGCTCGCTCCTAAAGTGGTGGCTAGAATGGGGCAAAGAGAGCCAATCGTGTGATCGCTCAAGCCAAATTTAACGCCAAAGATTTCGCCTAATTTAACCATGCTCAATAAATTAGCGTCTTTTATTTTACTGGGATAAGCGCTCACGCATTTTAAAAGGGTGATGTCAAAATTACCCACTTCTTTGCACAACGAGATAGCGTCTTGCAATTCAATGCTTGTAGCGATACCACTAGAAAGGATAATAGGCTTTTTTGTGCGAGCGGCCTTTTCAATCAGATCTAAATCAACGATTTCAAAACTAGCGATTTTATACATGGGGCAATTTAGGCTCTCTAAAAGTTCTAAAGCTTTTGAGCTAAAAGGCGAGCTAAAAATGCCTAAATCAAGCTTTTTAGCCAATTCAAACAATTCAGCATGCCATTCTAGGGGGGTGGAAGCCTTTTGATACAATTCATACAAATTTTCTTTATCCCATAAAGTGCCTTGAATGATGAAAGGATCTTCTTTAGAGTTTAAAGTCATGCAGCTTGGCGTGTAGGTTTGGAGCTTGACAAAATCCGTGCCGCTTTCCTTAATGGCATGAAGGCTTTCTTTAGCGAGATTTAAATCCTGGTTATGATTAGCGCTCAATTCAGCGACAATTTTAGGGAGTTGCAACATTTCTTATTTTTCCTTAATCAAAACTTCTTTTTCTAAGCGATAGACTTGAGAGCAAGTGAAAGCCAAATGCTCATCATGCGTGGCTAAAACTAACGCTCCTTCTTTTTCTGTAATGTAATTTTGCAGCATGCTGATGACTTGATTAGCGCTAGTGGTGTCTAAATTCCCGGTGGGTTCATCAGCGATAATGATTTTAGGTTTTTTAGAAAGCACTCTGGCGATGCTTAAGCGTTGTTGCTGGCCACCGCTCAATTCACCCACGCCTTGTTTTAGGGTGTGGGCTATGCCTAATTGTTCTAAAAGGGAATGATCGATTTCTTGCTTGGCTAGGATTGAAGCGACTTGTAAGTTTTCTAAAGCGCTAAAACCCTTAAAAAGGTAGTGCGATTGAAAGACTATGCCCACTTTTAAACGCCGTAATTCCAAAAGCTTTTTGGAATTTAAAGCATAAATATCTTGGTGTTCTAACAAACTAATTGTTCCGCTATCCGGTTTTAGCATGGTGGCTAAATGGCTTAAAAGCGTGCTTTTACCGCTCCCGCTCACGCCTAAAATCGCTAGGCTTTCTTTGGGCTTGATGCGCAAATTCACGCCGTTATAAAGGGGCTTTTCAAAAGCATGAGAAATATTAATCGCTTTAATCATTATCATTTCCTAAAAAGAATATCGCCTAATAAACTAGGGTTTAAAATGTAAGAAGTTGAAAAGTTCGCGCTGTGCAAGATGATTTTATCATAACGCCTTGCATAGTATTTTAAAAGCGTTTTTTGTAAAGTGGGTTCAATGCTTGGGCTAAACCATGCGTTATTGCTCATCACGATAAAAATTTTTGAAGGGCTGTTTGAATAAGCGGTTTTGGAAGTGCCTTCATAGCAAATCAGGGGGCGAAAAGTGAAATCGTCTAATGTAAAATCGCTGAAACTAGAAGCGTTGCGGTATAAATAAGCGCTCTCGCCAAAAAAGAGCTTTTCAAGGGGTTTTTGAAGAAACTCCGGTAAAGGCATTGTTTCGCCAAAGGGGGCTAAAACCACTTTATCAGCGATCTGAACGCCCTCTTTAGAAAATAAAAACGAGCTGTTATAAAGGCTATAGCCTTGAGTGCGCAGTGTCCCTATTAAAATAGCAATATTATCGCTTAAATCTTCTAGCTTAGCTTTAAAGGGGGAGTTTTCTAAAGCGATAGGGTAGGCGGTTTCTGGAAAAACAATCAAGGTTTTTTGCTTGCTTTGAGCGAGCTTGATTTCTTTAAGAATGCTGTTTTCAATATTATTAAGGTAGTTTGAGTCAAATTTCACATCTTGGGGCGTTTTTGTAGAGATTAATTCAATATTTCCAACCTTTTTTAAATCGCTCGCTTTAAAACCCTTAAAATCCAACGCGCCCAGTAATAATAAAACTGCTATGATCCTGTATTTTTTAAATTGTTTAGCGCTCAAAAAAATGCAAGCCAAAAAAACAAGCCCTAGCGATAATTTATCCACCCTAAACACGCTATAAGAAAAAAAACTATCCGGAACTAACCAATCAAATCCAAAGGGGTGGATAAAACTAGAGCCTAAAAAACTCAAAAGCCTGAAGTAGGGGTTTTCAAAATAGAGCAACAAATAAAATAAAACCCCATAAACTAACGCTATTAAAACAATGATTAAGGGTAATAAATAAGTGAAATCCGAGTAGCGGAAGCTTAAAGCGCACCAATAAAACAATAACGCTCCCACAAAAAACCCCAAAGCAAAAGTGCTATTCTTTGGGGTTTTTAAAAACGCTAGCATGCTTAAAGGGGCTAATAGGCTTGTGAGTATGATAGAAATATAGGGGTTTTCAATCGCATAAGCGTCTAAAACAGCGTTCACATACACGCTTGAAACAAACGCGCACGCTAATAAAAAAGCGTTTTGATTGAATAGAATAAGACGCATGGCTAAATTTTGAAACCTTGAGATTGTTTTAGTGTATTATAGCTATATTTTAATTTAAGAATTTTAGATTGATTTTTTTAAGGGTAGTTTTTTTTAAGTTGTGTTATTATTTTCAAATTTCAAGTCTAAAGAGCGTGGATTGATAGCGTTTAAAAATTATGAGCGTTTTTTGGGGCGTTTTTGAACGCTCGCTATCTTTATGCGAGATACATGAGAGAAAGGTTTGGGTTTGAATTATATTGATTTGGCGTTACTTGTGGTGGTGGTAGCCTTTGGGATTAGGGGATTTTATCATGGCTTCGTGAGTGAAGTGGCGGGGACTTTAGGGATTGTGCTTGGCGTGTATTTAGCGTCTCGCTATTCTGTGGCTGTTGGGCATTTATTTTCACAACATTTGTATGATCTAAAGAATGAGACCATGATGAATCTTGTTGGTTTCTTGTTGGTATTGGCGTCTATTTGGGTGTTTTTTTTAGCTTTTGGAGTGTTGCTAGGCAAGGTGTTAGTCTTTAGCGGGTTAGGTATCATAGACAGGGCGTTAGGGTTTATTTTTTCATGCTTGAAGACTTTTTTAGTGCTTTCTTTCATCCTTTATGCACTCTCTAAAATGGAAGTCATGAAAGACGCTAACGCCTACTTGCAAGGAAAAAGCGCTTTTTTTCCTACCATGAAAAGCGTTGCCAGTAAGATCATGCGTCTTGATGGCGTCAAACATGTGGAGCAAAACCTTAAAGACAACCTTGAAGAAATGAGCGATGAAGTCAAAAATAAAGAATCTTTCAATAAAAATAAACAATCTTTTGATAAAGCGATGGATAAGGGCGTGGGAGCTTTAAAAGAAAAGGCTAAAGACTTGCCTAAAAACATGCGAGATCCAAAAGCTAACCACACCCCACCAAACCACACCCCATCTAATAAAGAACCCCTATAAAGGCATAACATGTTTTCTAACCAATACATCCAACAACGCATCCATAAAGCCAACAGCTTGAGGGAAGAAGGGAAAAACCCTTATAAAAACGGCTTGAAACGAAGCCTTACAAACGCCGCTTTTTTAGAAAAATACGCTTATGTTAAGGATTTAGAAGAGCCTAAAGACAAGGAAAAATGCGAGAGTATTGTAGGGAGGGTCAAGCTTTTGCGCTTAATGGGTAAGGCATGTTTTATTAAAATTGAAGATGAAAGTGCGATTTTGCAAGCTTATGTTTCGCAAAATGAATTGAACGATGAATTTAAAAGCCTAAAAAAGCATTTAGAAGTGGGCGATATTGTGTTGGTAAAGGGTTTCCCTTTTGCTACCAAAACCGGTGAATTAAGCGTTCATGCCCTAGAATTTCATATTTTAAGCAAAACCATTGTGCCTTTACCCGAAAAATTCCATGGACTGAGCGATATAGAATTGCGTTACCGCCAGCGCTACTTGGATTTGATAGTCAATCCTAGCGTTAAAGATGTGTTTAAAAAACGCAGTTTGATTGTTTCTAGCGTGCGGAAATTCTTTGAAACGGAAGGGTTTTTAGAAGTGGAAACCCCCATGATGCACCCCATTCCTGGCGGGGCGAACGCAAGGCCTTTTATCACTTACCATAACGCTTTAGAAATTGAAAGGTATTTAAGAATCGCTCCAGAATTATACCTCAAACGCTTGATTGTGGGGGGTTTTGAAGCGGTGTTTGAAATCAATCGTAATTTCAGGAATGAGGGCATGGATCACAGCCATAACCCCGAATTTACGATGATTGAGTTTTATTGGGCGTATCACACTTATGAAGATTTGATCGAGCTCAGTAAGAGGCTGTTTGACTACTTGCTAAAGACTTTGAACTTACCTTCAAAAATCATTTATAACGATATGGAAGTGGATTTCAACCAAACGAGCGTGATTTCCTATTTGGACGCTTTAGAAACAATAGGGGGCATTAGTAAGGATATTTTAGAAAAAGAAGACAGGCTTTTGGCTTATTTGTTAGAGCAAGGCATCAAAGTGGAGCCAAATCTCACTTATGGTAAATTGCTCGCTGAAGCGTTTGATCATTTTGTAGAGCACCAACTCATTAACCCCACTTTTGTAACCCAATACCCCATTGAGATTAGCCCCCTAGCCAGACGCAACGATAGTAACCCTAATATTGCTGACAGGTTTGAATTGTTTATTGCAGGGAAAGAAATCGCTAACGGCTTTAGCGAGCTGAACGATCCTTTAGATCAATTAGAACGCTTTAAAAATCAAGTGGCTGAAAAAGAAAAAGGCGATGAAGAAGCCCAATACATGGATGAAGATTATGTGTGGGCGTTAGCCCATGGAATGCCCCCCACTGCAGGGCAAGGCATAGGCATTGATAGATTAGTGATGCTACTCACTGGAGCTAAAAGCATTAAAGATGTGATTTTATTCCCAGCGATGCGTCCTGTTAAAAACGATTTTAATGTGGAGAGTGAAGAATAA
Protein sequences of DBSCAN-SWA_1 >NZ_CP010013|196507:204721|201003_202275_-|WP_039704185.1|DBSCAN-SWA MRLILFNQNAFLLACAFVSSVYVNAVLDAYAIENPYISIILTSLLAPLSMLAFLKTPKNSTFALGFFVGALLFYWCALSFRYSDFTYLLPLIIVLIALVYGVLFYLLLYFENPYFRLLSFLGSSFIHPFGFDWLVPDSFFSYSVFRVDKLSLGLVFLACIFLSAKQFKKYRIIAVLLLLGALDFKGFKASDLKKVGNIELISTKTPQDVKFDSNYLNNIENSILKEIKLAQSKQKTLIVFPETAYPIALENSPFKAKLEDLSDNIAILIGTLRTQGYSLYNSSFLFSKEGVQIADKVVLAPFGETMPLPEFLQKPLEKLFFGESAYLYRNASSFSDFTLDDFTFRPLICYEGTSKTAYSNSPSKIFIVMSNNAWFSPSIEPTLQKTLLKYYARRYDKIILHSANFSTSYILNPSLLGDILFRK >NZ_CP010013|196507:204721|203215_204721_+|WP_000492481.1|tRNA|DBSCAN-SWA MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKDLEEPKDKEKCESIVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSVHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPSVKDVFKKRSLIVSSVRKFFETEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLPSKIIYNDMEVDFNQTSVISYLDALETIGGISKDILEKEDRLLAYLLEQGIKVEPNLTYGKLLAEAFDHFVEHQLINPTFVTQYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHGMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMRPVKNDFNVESEE >NZ_CP010013|196507:204721|196703_198050_+|WP_039704182.1|DBSCAN-SWA MKVYLRKVDNQCINNKRISITKGVLEHFFDNTNNQDEVDMKGILSNYNDKVSILLATDPRFGGGIKRIINAESNKIKENRLDYELKADDILLFTYISPKKYTLEIILPTDTRYNVLNGLISNRHLLVFSENETKSLSDNKIDGSVRIDGGKNIILYGVPGSGKSYTLQRDYCNDNSVVEKIVFHPDYSYSDFVGQIMPSVDDSGIVSYKFNPGPFTNILKKAYHNPQIKHVLVIDEINRGNAPAIFGEIFQLLDRLKHDKNGFKKGSSEYAINNMDIANIVHSDKNASIRIPSNLWIIATMNTSDQNVFTLDTAFQRRFSMQLIENSFENVDDDFKNMKILDTDITWQKFCTTINEKIAQNNEGLSSMEDKRFGVYFVNIDDLKSKENFAHKVIKYLWDDVFKFDRNIIFDTIKFNTLEAVVKNFTKEKGRTQFDIFSDGVKELLFNA >NZ_CP010013|196507:204721|200359_201001_-|WP_000588239.1|DBSCAN-SWA MIKAINISHAFEKPLYNGVNLRIKPKESLAILGVSGSGKSTLLSHLATMLKPDSGTISLLEHQDIYALNSKKLLELRRLKVGIVFQSHYLFKGFSALENLQVASILAKQEIDHSLLEQLGIAHTLKQGVGELSGGQQQRLSIARVLSKKPKIIIADEPTGNLDTTSANQVISMLQNYITEKEGALVLATHDEHLAFTCSQVYRLEKEVLIKEK >NZ_CP010013|196507:204721|196507_196729_+|WP_128481800.1|DBSCAN-SWA MVDPGEFIEFKSGKKIAKWYSDGLTKTKSAKERQIWRSKTFPGFAKAMAEQWGEFVKNEMFKKVKNESLFKES >NZ_CP010013|196507:204721|198042_199257_+|WP_039704183.1|DBSCAN-SWA MLNLKERCFRDNELSDNFVGIRSVNNDLQICFPLGFDISDDKNIRSDVKKLISVLLEYNKAIACENFLNNKNEIIRSNFPLTAYKNVIEYFLSHGYYAENKSYYENSTKGKINFSKTMKKNRPIIQNLNNKNSFIYTRFQVKKEMINENELITAINKYCVHEVFSKFGFVFSSFMPPKFKLPTDKNYCIYLLENRLNNTFNDDRKILFQSMKNILLQDDNILDKTDFKFGTYNFYVVWERMIDRAFGIKNKEVYFPKTKWNLRRSNQNPDYLLQPDSIMLFGDKIYILDAKYYKYGISGVASDLPSSASIIKQIVYGEYAAKLETQKEIYNVFLMPFNSSNNPLKLSNIFENIGFANGEWRDNLKQHENIQGILIDTKFLMQNYNKKSNNLLKLLVKNVEETKR >NZ_CP010013|196507:204721|202504_203206_+|WP_039704186.1|DBSCAN-SWA MNYIDLALLVVVVAFGIRGFYHGFVSEVAGTLGIVLGVYLASRYSVAVGHLFSQHLYDLKNETMMNLVGFLLVLASIWVFFLAFGVLLGKVLVFSGLGIIDRALGFIFSCLKTFLVLSFILYALSKMEVMKDANAYLQGKSAFFPTMKSVASKIMRLDGVKHVEQNLKDNLEEMSDEVKNKESFNKNKQSFDKAMDKGVGALKEKAKDLPKNMRDPKANHTPPNHTPSNKEPL >NZ_CP010013|196507:204721|199333_200356_-|WP_039704184.1|DBSCAN-SWA MLQLPKIVAELSANHNQDLNLAKESLHAIKESGTDFVKLQTYTPSCMTLNSKEDPFIIQGTLWDKENLYELYQKASTPLEWHAELFELAKKLDLGIFSSPFSSKALELLESLNCPMYKIASFEIVDLDLIEKAARTKKPIILSSGIATSIELQDAISLCKEVGNFDITLLKCVSAYPSKIKDANLLSMVKLGEIFGVKFGLSDHTIGSLCPILATTLGASMIEKHFILNKSLQTPDSAFSMDFNEFKSMVEAIKQSVLALGEEEPKINPKTLEERRFFMRSLFVIKDIQKGEALTSDNIKALRPNLGLHPKFYKEILGQKASKFLKANTPLSADGIERSL |
8 | Streptococcus_phage(33.33%) | tRNA | NA |
Homologous phage analysis in the prophage regionThe bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')
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| Acr ID | Acr position | Acr size | Homology with known anti | Neighbor HTH/AcRanker | Neighbor Aca | In prophage | Protospacer in prophage |
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