CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP006908	Clostridium botulinum CDC_1436 chromosome, complete genome	7 crisprs	csa3,cas3,WYL,DEDDh,cas6,cmr1gr7,cas10,cmr3gr5,csx1,cmr4gr7,cmr6gr7,DinG	1	9	12	0
NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	2 crisprs	cas14k,cas5,cas7b,cas8b1,cas6,c2c10_CAS-V-U3,cas14j,c2c4_V-U1	0	34	1	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006908_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006908_1

1693222-1693371

Orphan

Consensus_repeat	Method
TCCAGGAACAGATACAGG	CRT

3 spacers

The CRISPR arrays of NZ_CP006908_1

>merge|NZ_CP006908|1|1693222-1693371|CRT
TCCAGGAAAAGACACAGGTAAGGACCCAGGAACAGATACAGGTAAAGATCCAGGAACAGATACAGGTAAGGATCCAGGAACAGATCCAGGAACAGATACAGGTAAGGATCCAGGAACAGACACAGGTAAGGATCCAGGAACTACTCCTAA

>NZ_CP006908|1|1|1693222-1693371|CRT
TCCAGGAAAAGACACAGG	TAAGGACCCAGGAACAGATACAGGTAAAGA
TCCAGGAACAGATACAGG	TAAGGATCCAGGAACAGA
TCCAGGAACAGATACAGG	TAAGGATCCAGGAACAGACACAGGTAAGGA
TCCAGGAACTACTCCTAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006908.1\|WP_004441458.1\|1701434_1701992_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|367574
NZ_CP006908.1\|WP_039774091.1\|1682089_1683277_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	unknown	unknown	gnl\|CDD\|235513
NZ_CP006908.1\|WP_012720582.1\|1697341_1698967_+\|DAK2-domain-containing-protein	unknown	unknown	gnl\|CDD\|274671
NZ_CP006908.1\|WP_003388622.1\|1681869_1682088_+\|DNA-directed-RNA-polymerase-subunit-omega	unknown	unknown	gnl\|CDD\|234744
NZ_CP006908.1\|WP_003402155.1\|1696184_1696340_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_003388610.1\|1690692_1691442_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	unknown	unknown	gnl\|CDD\|223704
NZ_CP006908.1\|WP_003395976.1\|1696585_1696777_-\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP006908.1\|WP_004441476.1\|1694456_1695107_+\|ribulose-phosphate-3-epimerase	unknown	unknown	gnl\|CDD\|235515
NZ_CP006908.1\|WP_004441474.1\|1695108_1695753_+\|thiamine-diphosphokinase	unknown	unknown	gnl\|CDD\|153431
NZ_CP006908.1\|WP_004441462.1\|1699134_1701174_+\|ATP-dependent-DNA-helicase-RecG	unknown	unknown	gnl\|CDD\|236794
NZ_CP006908.1\|WP_033063178.1\|1687601_1688285_+\|zinc-metallopeptidase	unknown	unknown	gnl\|CDD\|377289
NZ_CP006908.1\|WP_004441479.1\|1693584_1694463_+\|ribosome-small-subunit-dependent-GTPase-A	unknown	unknown	gnl\|CDD\|234631
NZ_CP006908.1\|WP_039774092.1\|1688305_1689634_+\|16S-rRNA-(cytosine(967)-C(5))-methyltransferase-RsmB	unknown	unknown	gnl\|CDD\|237857
NZ_CP006908.1\|WP_003395974.1\|1696976_1697327_+\|Asp23/Gls24-family-envelope-stress-response-protein	unknown	unknown	gnl\|CDD\|377129
NZ_CP006908.1\|WP_004441470.1\|1696417_1696537_+\|stage-V-sporulation-protein-SpoVM	unknown	unknown	unknown
NZ_CP006908.1\|WP_004441484.1\|1689645_1690674_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	unknown	unknown	gnl\|CDD\|184686
NZ_CP006908.1\|WP_012720841.1\|1686309_1687251_+\|methionyl-tRNA-formyltransferase	unknown	unknown	gnl\|CDD\|234567
NZ_CP006908.1\|WP_003388624.1\|1681259_1681889_+\|guanylate-kinase	unknown	unknown	gnl\|CDD\|234719
NZ_CP006908.1\|WP_004441495.1\|1685849_1686293_+\|peptide-deformylase	unknown	unknown	gnl\|CDD\|234668
NZ_CP006908.1\|WP_012721446.1\|1683614_1685822_+\|primosomal-protein-N'	unknown	unknown	gnl\|CDD\|235514

Protein	Function_ID	Function_description	E-value
NZ_CP006908.1\|WP_004441458.1\|1701434_1701992_+\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	4.87056e-76
NZ_CP006908.1\|WP_039774091.1\|1682089_1683277_+\|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC	gnl\|CDD\|235513	PRK05579, PRK05579, bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated.	0
NZ_CP006908.1\|WP_012720582.1\|1697341_1698967_+\|DAK2-domain-containing-protein	gnl\|CDD\|274671	TIGR03599, YloV, DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.	0
NZ_CP006908.1\|WP_003388622.1\|1681869_1682088_+\|DNA-directed-RNA-polymerase-subunit-omega	gnl\|CDD\|234744	PRK00392, rpoZ, DNA-directed RNA polymerase subunit omega; Reviewed.	9.27471e-23
NZ_CP006908.1\|WP_004441462.1\|1699134_1701174_+\|ATP-dependent-DNA-helicase-RecG	gnl\|CDD\|236794	PRK10917, PRK10917, ATP-dependent DNA helicase RecG; Provisional.	0
NZ_CP006908.1\|WP_003388610.1\|1690692_1691442_+\|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase	gnl\|CDD\|223704	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms].	2.4485e-71
NZ_CP006908.1\|WP_003395976.1\|1696585_1696777_-\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	6.42225e-21
NZ_CP006908.1\|WP_004441476.1\|1694456_1695107_+\|ribulose-phosphate-3-epimerase	gnl\|CDD\|235515	PRK05581, PRK05581, ribulose-phosphate 3-epimerase; Validated.	1.57742e-124
NZ_CP006908.1\|WP_004441474.1\|1695108_1695753_+\|thiamine-diphosphokinase	gnl\|CDD\|153431	cd07995, TPK, Thiamine pyrophosphokinase. Thiamine pyrophosphokinase (TPK, EC:2.7.6.2, also spelled thiamin pyrophosphokinase) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamine) to form the coenzyme thiamine pyrophosphate (TPP). TPP is required for central metabolic functions, and thiamine deficiency is associated with potentially fatal human diseases. The structure of thiamine pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis.	1.43729e-76
NZ_CP006908.1\|WP_033063178.1\|1687601_1688285_+\|zinc-metallopeptidase	gnl\|CDD\|377289	pfam04298, Zn_peptidase_2, Putative neutral zinc metallopeptidase. Zinc metallopeptidase zinc binding regions have been predicted in some family members by a pattern match (Prosite:PS00142), of the characteristic HEXXH motif.	2.77231e-122
NZ_CP006908.1\|WP_004441479.1\|1693584_1694463_+\|ribosome-small-subunit-dependent-GTPase-A	gnl\|CDD\|234631	PRK00098, PRK00098, GTPase RsgA; Reviewed.	1.21434e-156
NZ_CP006908.1\|WP_039774092.1\|1688305_1689634_+\|16S-rRNA-(cytosine(967)-C(5))-methyltransferase-RsmB	gnl\|CDD\|237857	PRK14902, PRK14902, 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB.	0
NZ_CP006908.1\|WP_003395974.1\|1696976_1697327_+\|Asp23/Gls24-family-envelope-stress-response-protein	gnl\|CDD\|377129	pfam03780, Asp23, Asp23 family, cell envelope-related function. The alkaline shock protein Asp23 was identified as an alkaline shock protein that was expressed in a sigmaB-dependent manner in Staphylococcus aureus. Following an alkaline shock Asp23 accumulates in the soluble protein fraction of the S. aureus cell. Asp23 is one of the most abundant proteins in the cytosolic protein fraction of stationary S. aureus cells, with a copy-number of >25000 per cell. A second Asp23-family protein, AmaP, which is encoded within the asp23-operon, is required to localize Asp23 to the cell membrane. The overall function for the family is thus a cell envelope-related one in Gram-positive bacteria.	1.93076e-35
NZ_CP006908.1\|WP_004441484.1\|1689645_1690674_+\|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN	gnl\|CDD\|184686	PRK14454, PRK14454, 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN.	0
NZ_CP006908.1\|WP_012720841.1\|1686309_1687251_+\|methionyl-tRNA-formyltransferase	gnl\|CDD\|234567	PRK00005, fmt, methionyl-tRNA formyltransferase; Reviewed.	0
NZ_CP006908.1\|WP_003388624.1\|1681259_1681889_+\|guanylate-kinase	gnl\|CDD\|234719	PRK00300, gmk, guanylate kinase; Provisional.	2.54104e-113
NZ_CP006908.1\|WP_004441495.1\|1685849_1686293_+\|peptide-deformylase	gnl\|CDD\|234668	PRK00150, def, peptide deformylase; Reviewed.	1.80568e-73
NZ_CP006908.1\|WP_012721446.1\|1683614_1685822_+\|primosomal-protein-N'	gnl\|CDD\|235514	PRK05580, PRK05580, primosome assembly protein PriA; Validated.	0

>NZ_CP006908.1|WP_003388610.1|1690692_1691442_+|Stp1/IreP-family-PP2C-type-Ser/Thr-phosphatase
MLGILSDIGNVREINEDFVDYYQGDRFKIYIVADGMGGHNAGEVASKLAVEETIDYIRYYEDLKDMKTLLIDAIEYANTKIYNYAKEKEKFKGMGTTITCCILDNNGNMIVANVGDSSCYILAEGGVKKITKDHSYVQQLLDEGTITKEEANTHPNKNVITRALGTNLSVKVDTFNIKLDEVCKVLLSTDGLTNYVDEQEMCDILLRNGKNNEETCKQLVELSKLKGGKDNISVILFEGECEYDRNQIR
>NZ_CP006908.1|WP_004441484.1|1689645_1690674_+|23S-rRNA-(adenine(2503)-C(2))-methyltransferase-RlmN
MENILDFTLEELKEWLISKEEKGFRAKQVFDWIYNKLIFDFNNMKNIPYKTKNLLSDNFYIGVPKVVKKLMSQDKNTYKFLFEYKDGNVIESVVMKYKHGNSICVSTQVGCRMGCKFCASTLDGVIRNLTSGEILSQIMAAQKEIGERISNVVLMGSGEPLDNFKNVTKFLDLVTSDTTLNIGQRHITLSTCGIVPKIKELADKNYNITLAISLHSPEDLLRKEMMPIANKYSIKELMEACDYYINKTNRRITFEYALVKGKNDSIKEAKKLSTVLKGKLCHVNLIPVNEIKENSYEKSTSKNIESFGNILKENGIETTIRREMGADINAACGQLRRSYVSK
>NZ_CP006908.1|WP_039774092.1|1688305_1689634_+|16S-rRNA-(cytosine(967)-C(5))-methyltransferase-RsmB
MDNAREVALDVLKAVLFDGAYSNIVLSKKLNKSNLKDNDKALITEIVYGTLKYKETLDIIIQSYLRNPIKTMDKNIINILRITIYQIRYLDKIPSFAAVNEAVEMSKKISIKYSKLVNGVLRNYIRTYKNKKFYDHRNNLEKFSFMYSYPKWLIKMFISQYGIEIAEKILKGLNERPNITVRVNNLKIDYDEAFEKLGEYGYNIEEGYICPEAIQIIKGKNIEKNPLFIEGNITVQDESAMLVAPSMELDEESIVLDLCSAPGGKTTHISEIMNNKSKVYAYDIHQNKLSLIESNAKRLGIKNIETDVGDAAVFNKKLKEKAHRVLMDVPCSGLGIIRKKPEIKWTKNEREIKNIIDIQRKIMNNGASYLKEGGILLYSTCTLNKEENEENINWFLKKHKNFKIEPLYYGDVDNIIYHKEGFVSILPNDKMDGFFIAKLKKC
>NZ_CP006908.1|WP_033063178.1|1687601_1688285_+|zinc-metallopeptidase
MFYYDSTFLILIPAMLIAAWAQLKVSSSFDRYSRVSTAKGYTGAQVARMLLDSKGLYNVPVELIPGKLSDHYDPSKRVMRLSKDVYYGNSVASIGVAAHETGHAIQHLESYSPLVIRNTIVPIVNISSQASWILFFIGILMGASSLTRIGIILFSAVVLFQLITLPVEFDASKRALVLLENKGILYKEEVNGAKKVLSAAAMTYIAAALTAILQLVRLIVLSNRRND
>NZ_CP006908.1|WP_012720841.1|1686309_1687251_+|methionyl-tRNA-formyltransferase
MKDTTIVFMGTPDFAVPSLKKIIEKFNVKAVFTQPDRPKGRGKKLAMSAVKEVALQNNIEVYQPIKLKNDEICIKKLKEINPDFIIVVAFGQILSKEVLDIPKYGCINLHASLLPKYRGAAPINWAIIKGEKESGNTTMFMDEGLDTGDMLLKNTVKIEDDMTFGELHDILMETGSELLVDTIKGLKEGTIKREKQKSENIIYASMLNKQMGKIDWNKTSKEINLLIRGLNPRPVAYTQYKNETMKIYNSSILKESSNKTPGTILKVSKGGIKVATGDGILSITTVQFPGKKPMKVEEYIKGHTIEEGLVLGE
>NZ_CP006908.1|WP_004441495.1|1685849_1686293_+|peptide-deformylase
MAIRNIRKYGDELLRKKSRKIEKIDDRILTLLEDMVETMYSAEGVGLAAPQVGILKRAVVIDVGEGLIKLINPEIIETEGNQKDVEGCLSVPGEQGEVERPYKVKVKALNEKGEEIVLEGEGLLARAFCHEIDHLDGVLFVDKVIDK
>NZ_CP006908.1|WP_012721446.1|1683614_1685822_+|primosomal-protein-N'
MFKYAGIIVNNSSIKLDKLFTYAIPEELNEKIKIGHRVKVPFGKGNKKIDGFILELYENYEDEDKVYIKSISNICEENPLLDLNRVKLVEQMKERYLCTYLEAIKVLVPPGITKGNKEKKENFIFIYKNLEGKYLKENYEQIYDFVKLNDGVYNKNILNKKFGFSLSSINTLIKHGFLIQENQVVNRYNEKIYRNYEEKILNRDQSLALYRILNSNRKLFLIHGVTGSGKTEIYMHLVKKLIEKDKDSIILVPEISLTPQMVERFKGRFGKVIAIFHSKLSNGERFDEWMRVKRGEVKVAIGARSAVFLPFKNLGAIIIDEEHESSYKSDSNPKYNARDIAELRCMNEGCKVILGSATPSLETYYRSKNKIIDLITIKERIEGASMPEVKIVDMREELMSGNKSIFSRELFEDISTRLEKKEQIILFLNRRGFSTFVSCRECGYVFKCKNCDISLTYHNKDNSLRCHYCGASTRIPKQCPKCNSKYVKYFGAGTEKVEKAIKKCFPKVKTLRMDLDTTRTKDAYENIYNTFKNGEADILIGTQMIAKGLDFENVTLVGVLAADMSLNLPDYRSGERTFQLITQVSGRAGRGKKEGKVLIQSYNPENYSIASAAKSDYEGFYNKEIKIRKDMNYPPFSKILLINLSSKYENKLIKNTHKIGIILKNVLSKYDNLNMLGPCPSPLSKIKEMYRWQIILKGNVTGDIMKEIQKIVYTSLEQVYNDIRVSIDINPNSLL
>NZ_CP006908.1|WP_039774091.1|1682089_1683277_+|bifunctional-phosphopantothenoylcysteine-decarboxylase/phosphopantothenate--cysteine-ligase-CoaBC
MNKKCVVLGVTGGIASYKALDIVSKLKKLNYDVNVIMTKSALQFIHPLPFQSLSGNMVSKDMFEEPKAFEIQHISLAKKADMILVAPATANIIGKVANGIADDMLSTTIMAATCPVVFVPAMNTNMYKNPIVKSNIEKLKGFGYEFINPISGRLACGDVGEGKMADTKDIVEIADSMLYPIKDLKGKNILVTAGPTLAPIDPVRYITNKSSGKMGYSIAKEARDRGAKVTLVSGPTNLKTPLGVDIIKINTNEEMLKAVEDNFEKQHIVIKSAAVADYRPKEYKEHKIKKTGNDLNLELMRDKDILKELGLIKKNQILVGFAAESKDLLDNAKSKLEKKNLDFIVANNILSKETGFASEDNLVTIISRDGHIKNLEKMSKREVAKEIFDTILNKK
>NZ_CP006908.1|WP_003388622.1|1681869_1682088_+|DNA-directed-RNA-polymerase-subunit-omega
MSNSMINPSIVNLLEKVDDRYSLVTITSKRSRQLIDGAKPLVDIDSTKPVTVAINEIHEGKITYKTVKEGIK
>NZ_CP006908.1|WP_003388624.1|1681259_1681889_+|guanylate-kinase
MAKKGLLIVISGPSGAGKGTICKELLKKEDLWVSVSATTRSPRKGEENGVHYFFLNKDEFNERIEKDDFLEYAKVHQNLYGTPKSSVLEKINNGNNVILEIDIQGALKVKETYPEGIFIFILPPSMEELKNRIINRGSETAETLMIRFKAAYKEINYVSKYNYAVVNDTVEDAVNKVRSIILAESCRVDRMKDTILASKEEFIHEQFYD
>NZ_CP006908.1|WP_004441479.1|1693584_1694463_+|ribosome-small-subunit-dependent-GTPase-A
MKGTIIKGIGGFYYIKIDNSEEIIECKARGKFRHTELTPMIGDYVEISIDKNNKGAIEKIYERRSELFRPAVANVTQALVVFSFKNPDINIDLLNKFLLLCEYNNLKVIVCFNKMDLVNKEDYKDIISMIEQAGYDIIFLNAKEERNMDIIKKLIKDNVTVFCGPSGVGKSTMLNKIIGKETMITGNISEKLKRGKHTTRHSELIYVDEGLLVDTPGFSSLDINFMEKEDLLYCIPEFRDFIGECKFTGCLHHREPNCAVKKAVEEGHIHKNRYDFYIKTLEEIMNRRKKKW
>NZ_CP006908.1|WP_004441476.1|1694456_1695107_+|ribulose-phosphate-3-epimerase
MVKIAPSILSADFSKLGEDIKNLDKYGADVIHIDVMDGRFVPNISFGIPIIKSIRNLTDKPFDVHLMIEEPSKYIEDFAKAGADIISVHYEADKHIDRTINYIKSLGIKAAVALNPGTSVSCIKDLIPSLDMVLIMSVNPGFGGQKYIQYASEKIKEVKALSEKNNKDLIIEVDGGITKDNIKEIANCGADLLVAGSAVFKNGEIEKNIKVLREAL
>NZ_CP006908.1|WP_004441474.1|1695108_1695753_+|thiamine-diphosphokinase
MKAIVIGGGEAPSKELLKQEMKDSSYIICADSGANCLYKYDIIPDFILGDMDSIDKKALSYFKEKGVCMDKYPKDKDFTDGLVALNKAIELKADTIVLLGCIGNRIDHILGNLGLLEICLKNNIKAYIKDENNEIFLTDKDISLKPRKSKYFSLQAYGPNVEGVTLFNAKFPLENYTLKMGDTLTTSNEFTDKELHVHIKSGTLIVIISKDSDG
>NZ_CP006908.1|WP_003402155.1|1696184_1696340_+|hypothetical-protein
MGRKSNKKLGIIVGSIGLGIVVTIIVPIWGWLLAVGFGLIYIGWWIINRCR
>NZ_CP006908.1|WP_004441470.1|1696417_1696537_+|stage-V-sporulation-protein-SpoVM
MIKHIKELIYVEVCYMKIVAIKLPRFLSNIIKKIKRVKK
>NZ_CP006908.1|WP_003395976.1|1696585_1696777_-|50S-ribosomal-protein-L28
MSRKCEICGKGVVYGVQYSHSHRQSKRSFAPNIKRVKAIVNGTPKRVHVCTRCLRSGKVQRAI
>NZ_CP006908.1|WP_003395974.1|1696976_1697327_+|Asp23/Gls24-family-envelope-stress-response-protein
MIGKLTNEYGHIDYAEDVVANIVGVSTMECYGVVGMASKNATDGLWELIKGESFNKGVKIRAVEGKLNIELYIIVEYGTKISVIANNIIQKIRYNIENYTGLKVSSITVNVQGVRV
>NZ_CP006908.1|WP_012720582.1|1697341_1698967_+|DAK2-domain-containing-protein
MEHMKIKGADFYNMVINGSNKLEEKKEFVNSLNVFPVPDGDTGTNMSMTFRSAVKEIEGLKEESIGGIAKKVAKGALMGARGNSGVILSQIFRGISKGLEDKDEVDAREFANALLEGSKSAYKAVMRPTEGTILTIIRAAGESAVKSEAEDVTSLLKEVCEHSKVVLNKTPDMLPVLKKAKVVDAGGQGLLIILQGMLEVLDKDLEVEIGGENKASDPNTKIEQYEQDIEFGYCTEFFVMAENVDVDKFKGQLESLGDSMIVVAADGLVKVHIHTNDPGDILSKAIKLGPLSKIKIDNMREQHKHIIDMNSEENKVEKEESELKKYGFISVALGEGITEIFKDLGVDEVIEGGQTMNPSTEDIVKAINKINAENIFILPNNKNIIMAATQAAELSEKNIIVIPTKTIPQGITSITMFNPEAESKENENNMKEAIKAVATGSITYAVRDTEMDGKIIKENDILGLIEGKISEVGKDIFEVSKAVLEEMIDEDSELISIFYGKDCDEEKIEEFIEELEEKYEDLDIQCYNGKQPLYYFIMSVE
>NZ_CP006908.1|WP_004441462.1|1699134_1701174_+|ATP-dependent-DNA-helicase-RecG
MNVYSPITTLKGVGPKTKEQLEKCMIFNIMDLLLYFPRDYEFIDNYSKDKLLSKKVIIKVQVENIKRDIRTRTGKILTTIIFNDGEKAIVGSWFNQPYIKNYFKIGEEYVLQGSLKEYRGNLTINNAQILKNKCAEEVEERKIIPKYPLKGDLKNNLLIKLVDSVLTNIDIGENLPIWLIEKYKFLSLDKSIRTIHKPENQKELEESIRRLKFQELLAYCLKIAFLKEYLETATEGISFIVSEEINNLIEVLPFKLTNAQNKVLQEIFKDQEKEKPMNRLLQGDVGSGKTIIALISLFNVIKNGYQGVMLAPTEILAVQHYEEALKLFKDFNLNIELLIGSIKVSSKKEIKEKLKEGKIDLIIGTHALIEDDVEFYNLGMVITDEQHRFGVMQRSKMLNKGKSVDTLVMSATPIPRSLTLSLYGDLDLSIIDELPPGRQKIDTYYVNDSYRKRVYNFALKEINNGRQVYIVCPLVEEKEELDLNSVEKLYNDLKEEYFKEVEIAILHGKMKGKEKDTIMKDFKEGKIKALISTTVIEVGVNVPNATLMVIENAERFGLAQLHQLRGRVGRGKHKSYCILIAKVKNDIIRKRMEIMKSSNDGFLVAEEDLKLRGGGEIFGFKQHGSSNLLLADVIEDIHLLRIANMESKKIIDSNNEEDNKIKEEVKIKIKNNSKFICFN
>NZ_CP006908.1|WP_004441458.1|1701434_1701992_+|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MRIISGSARGRKILSPQSSVTRPTLDRIKESIFNIIQNQVYGSRVLDVFAGTGSLGLEAASRGAKFSYLVDKSPETYPLLRENIKNLKFEDLCKSFNMDAYSALEEFASKSIVFDLIFIDPPYAKEMIPPAMESIDKKKLLDKEGLIVTKIDSSEEIYGGTERIKLFDHRKYGNTTVCFYKFKED

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Crispr_ID: NZ_CP006908_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006908_2

2198336-2198498

TypeIII

III-B

Consensus_repeat	Method
GTTGAACATTAACATGAGATGTATTTAAAT	CRISPRCasFinder

2 spacers

cas6,cmr1gr7,cas10,cmr3gr5,csx1,cmr4gr7

The CRISPR arrays of NZ_CP006908_2

>merge|NZ_CP006908|2|2198336-2198498|CRISPRCasFinder
GTTGAACCTTAACATAGGATGTATTTAAGACTAATTTTCCTAACGTAGATATAATACCATTCACCAAGTTGAACCTTAACATAGGATGTATTTAAGATAAAAAAATGAAAAATATGAAGCATATTTAGTATTGTTGAACCTTAACATAGGATGTATTTAAGCA

>NZ_CP006908|2|1|2198336-2198498|CRISPRCasFinder
GTTGAACCTTAACATAGGATGTATTTAAGA	CTAATTTTCCTAACGTAGATATAATACCATTCACCAA
GTTGAACCTTAACATAGGATGTATTTAAGA	TAAAAAAATGAAAAATATGAAGCATATTTAGTATT
GTTGAACCTTAACATAGGATGTATTTAAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006908.1\|WP_012720929.1\|2190401_2191745_+\|purine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|273859
NZ_CP006908.1\|WP_012721174.1\|2194767_2195214_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP006908.1\|WP_079994795.1\|2195981_2196365_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133398
NZ_CP006908.1\|WP_003361951.1\|2201483_2202404_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP006908.1\|WP_003361949.1\|2203270_2203720_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP006908.1\|WP_003361950.1\|2202715_2203132_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP006908.1\|WP_012721288.1\|2196398_2197862_-\|lipase	unknown	unknown	gnl\|CDD\|335313
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP006908.1\|WP_003361943.1\|2209095_2210550_+\|hypothetical-protein	csx1	mkCas0085_csx1_CAS-III	unknown
NZ_CP006908.1\|WP_012720921.1\|2193568_2194600_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP006908.1\|WP_003361952.1\|2199666_2201160_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP006908.1\|WP_012721240.1\|2186351_2187125_+\|2-hydroxyglutaryl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|224835
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP006908.1\|WP_012720846.1\|2195295_2195748_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378897
NZ_CP006908.1\|WP_012720422.1\|2187405_2188725_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|224255
NZ_CP006908.1\|WP_012720893.1\|2189064_2189964_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP006908.1\|WP_039774258.1\|2191951_2193343_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|238623

Protein	Function_ID	Function_description	E-value
NZ_CP006908.1\|WP_012720929.1\|2190401_2191745_+\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	7.8635e-137
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|273859	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents the region of stongest conservation, the N-terminal half, of one such family, represented by TM1795 from Thermotoga maritima. This protein is the first of a set of six genes, mostly from the RAMP superfamily, that we designated the CRISPR-associated RAMP module.	8.65634e-11
NZ_CP006908.1\|WP_012721174.1\|2194767_2195214_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.10952e-15
NZ_CP006908.1\|WP_079994795.1\|2195981_2196365_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133398	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators. Helix-turn-helix (HTH) heavy metal resistance transcription regulators (HMRTR): MerR1 (mercury), CueR (copper), CadR (cadmium), PbrR (lead), ZntR (zinc), and other related proteins. These transcription regulators mediate responses to heavy metal stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.7281e-33
NZ_CP006908.1\|WP_003361951.1\|2201483_2202404_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	1.08111e-89
NZ_CP006908.1\|WP_003361949.1\|2203270_2203720_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	5.40648e-37
NZ_CP006908.1\|WP_003361950.1\|2202715_2203132_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	2.24554e-13
NZ_CP006908.1\|WP_012721288.1\|2196398_2197862_-\|lipase	gnl\|CDD\|335313	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II. Platelet-activating factor acetylhydrolase (PAF-AH) is a subfamily of phospholipases A2, responsible for inactivation of platelet-activating factor through cleavage of an acetyl group. Three known PAF-AHs are the brain heterotrimeric PAF-AH Ib, whose catalytic beta and gamma subunits are aligned in pfam02266, the extracellular, plasma PAF-AH (pPAF-AH), and the intracellular PAF-AH isoform II (PAF-AH II). This family aligns pPAF-AH and PAF-AH II, whose similarity was previously noted.	1.11516e-17
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	8.45426e-42
NZ_CP006908.1\|WP_012720921.1\|2193568_2194600_+\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	2.64395e-90
NZ_CP006908.1\|WP_003361952.1\|2199666_2201160_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.39048e-120
NZ_CP006908.1\|WP_012721240.1\|2186351_2187125_+\|2-hydroxyglutaryl-CoA-dehydratase	gnl\|CDD\|224835	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism].	6.56628e-97
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.07531e-21
NZ_CP006908.1\|WP_012720846.1\|2195295_2195748_-\|hypothetical-protein	gnl\|CDD\|378897	pfam12638, Staygreen, Staygreen protein. This family of proteins have been implicated in chlorophyll degradation. Intriguingly members of this family are also found in non-photosynthetic bacteria.	2.63863e-82
NZ_CP006908.1\|WP_012720422.1\|2187405_2188725_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	6.55607e-27
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.08006e-62
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.25306e-31
NZ_CP006908.1\|WP_039774258.1\|2191951_2193343_+\|amidohydrolase	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	0

>NZ_CP006908.1|WP_012721288.1|2196398_2197862_-|lipase
MRMLEVILFLVILTTTGGILFVKPNRRLYIVFLLSVVLVMLLHGTINHFRIQMLPSYAVALVLVIVLIHRLIKSDSKHKSQSIPKSLLKKSFVSILVLIFIGTSAYLSFLLPVFTMPKPTGNYGIGTVSAHLTDESRAETLSTSPDDKREIMVNVWYPVDQKDIKGKTVEHYPSELGEAISLVFNIPKQLFTHLSQVPTHVVQGAKISTAESKYPVLLFSPGIRSTRFQSLTTIEELVSHGYIVVGLDHPYTSAKVTFPDGRSIFYKPDTKSMTASELYKHNIGNVGIRVADVSFLLDTLTKWNKKDPNALLQGKLDLERIGMFGHSYGGATTAEALAQDNRLKAGVSLEGGFWGSVSQKGLKQPFMYLMSGGTAASFDPSTIKKDKVFYKEFIPDLQSVINKSTNSTYYLTVDHFIHQSFTDISLMSPLLFAKSIDPVHNIDITRSYVRAFFDQYLKGTHSILLDGPSSKYPEVKFSDIYTKKRLN
>NZ_CP006908.1|WP_079994795.1|2195981_2196365_-|MerR-family-transcriptional-regulator
MNKMTRGELARQTGISTSTIRYYEDSGILPAPKRIANGYRIYTDDYLVKIKFIKDAKSLGYSLKEIKEILQMLSQEMDGENLKGFVKNKICEIEERIKTLHSIQRMLTDLLNTSEEDIQNYLQSFRI
>NZ_CP006908.1|WP_012720846.1|2195295_2195748_-|hypothetical-protein
MSKLNPEKLSVEFRDVVTNTEPILGRRYTLTHSDITAELFLTIGSAYAYDKINATRDEVLGEWIGKQKNYLFHVYLHVDGNNPIVTGVRNHIFRRELPLALEAIRYGDRKFFSFHPKLDNSPIIVHFISSYPSFNRIEKWGTFSDYFLKK
>NZ_CP006908.1|WP_012721174.1|2194767_2195214_+|helix-turn-helix-transcriptional-regulator
MSLGEKLLYLRKKAGLSQEDVAEKLSVSRQTVSKWETDQMVPELNKAKLLSQLYNVSYDYLISENYISGDVTGIEMIVDEIDWTGAWSKKYPILASYPGIKGINTYSEKISELYDSFKNDFGFNDTDTVLVLKDILYQKYKMEKKKTK
>NZ_CP006908.1|WP_012720921.1|2193568_2194600_+|alpha/beta-hydrolase
MKKVIKVVSVILVILVISGFFIIKNLTETKNGKLNMYVAANLQLYKILNPKSPNSKSIEETRGALNKQSTRWSNKPIPFSNIKNLHIKMNNEKIPVRIYTPEKGSNFPIIIYSHGGFWIGGNVDTIDGVCRKLSQNTKAIVISVNYRLAPENPFPAGLNDVYNVLQWTYKNGKSINGDEKHIAVVGDSAGGNLSAAVSSMSRDKNGPPITCQVLIYPSTNIFKLNSKSWSHFSNSFNVSKEDMEKYISIYAPKKEDRKKPYASPLLSKDLRKLPDTLVVTAEIDPLRDEGEAYANKLKESGVKAEVTRYKGITHGFITMDKITNKADEALNQISLYIQKEFQK
>NZ_CP006908.1|WP_039774258.1|2191951_2193343_+|amidohydrolase
MNQILIKNGYIITMDCSKKIFEKGDILVEDSKIIAIGNVESELIKSNVEIIDVNGKIIMPGLVNTHVHLSQQLARGLADDVDLLTWLRKRIWRYESNMDLEDSYISSLACCTELIRSGVTTFCEAGGQEVDGMGKAVEEAGLRGILCRSTMDCGDGLPLKWQETTEESLQKQVELLERWNGKGDGRIKYWFGLRTIFNTTDKLITKTKELADKYKVGIHMHVAEIEEEVRYAEATRGETTVQHLAKLGVLDKNFLAVHTVWLTEQEIDLFKLHNVKVSHNPGAAMKVVLGFAHIPEMLEKGINVSIGTDGAPSNNRMDMFDEMHLTSLIHKGRRLNPKVVPADEVLEMATMNGAKCALWEDEIGSLEVGKKADLIIINPKSIGSLPMHDPIGNIVYSMHSSDVESSMCNGKWLMKNKVLLTINEEDIIREAQEKATALVKKQVLSYQNVFKIERIIFKLAIIV
>NZ_CP006908.1|WP_012720929.1|2190401_2191745_+|purine-permease
MKSTKDTNLIVGIDEKISLRYAFFLGLQHVFAMDLYIVPIILAGILSLDAQNTAYFIQMSFIAAGIATLIQTGLCMRLPIMQGPSYIPIGALAAIGSKLGLQAMVGSLIPGSLFLMILGYPLRFLSKIISKFIPHIVGGTVIIIVGISLMPVAMTNIFTAPGNLKINCILALISSALLVSCMMIGRKSNKFGKAVRLTSVMISLIGGTIAASLLGVVDFTPVTKAAWFSFPKLLPFGKPVFDLKAILTMLFIYAVILVETSGTWFAVSAVTGSELTDEGLNRGAVGEGIGCFVGALFGGTPMTGYSTNAGIIAVTGVGSRMAIIAGGIILVALGMLPKLMNVIACIPSAVVSGVFAVVCVIIAMNGFKSIQHEELDERNMLLIGLPILLALGTTVLPKDILNSLPSLANYIFSSGITVGALAAVILNILLPKAPVEVSKSQEYEEAV
>NZ_CP006908.1|WP_012720893.1|2189064_2189964_-|hypothetical-protein
MSNKRNLQSIRSFYLCILIFNIVYSSIFHLNNKGFNIKLFGDLTMRSVVLFTLNSILFLCVVIAVEKKININEEIKTQVSMRIRPLYLVNIFFITYILVCIFLLKNLDVILSSFVMEIIYIGILILTKKIMTLELTDRQLQWQKACGYIDENCEKSSFLWRFKIWYSPHINVPFKNRWKRPSRLLYDLALVYGIIISKGTLFSLLLLILLFPDVLSWLEGLLGLQTSLTGICTGITEHHSKNSHVIYHKVYVTDYKNKREITFLVDGPLFIHENSNITVVHGTFSKRVLYIEGLNLDIR
>NZ_CP006908.1|WP_012720422.1|2187405_2188725_-|APC-family-permease
MLEKKYGLWTTVSMVIGIVIGSGVFFKADNILIASGGNVKTALLAWLVGAISMIFGALVFAECANRFERSNGIVDYAEGMLSEKFAYLIGWFNGIIYYPAIAAVLAWAAGNYTAILFNKDGNFVWVMAAIYMIGIYILNYISPILSGKFQIASTAIKLVPLMLIAILGIFQGLNNGILIENFSKVSTIGDSGSGFAAAVLGAAFAYEGWIIATTINGEIKDAKNTLPKALVFGSLVIVIIYILYFLGIVGMIPTETILKQGDNTVNVAARTVFGNFGASILTIFIIVSCLGTLNGLILGGSRSFYSLAIRGQGIKPEAFSKLDSKTNIPTNSTIANFILICIYLVVWYMNFKGLFPNKMFVDISELPIALIYGIYIIIYIAYMMKMKDLSFIKRFVIPSLALMGALIVVYGGLSKPSVIIDLGISVFVFLSGLLFYNKK
>NZ_CP006908.1|WP_012721240.1|2186351_2187125_+|2-hydroxyglutaryl-CoA-dehydratase
MYTMGLDIGSTTSKGVIIKDGEEIVASVLVPVGTGTSGPLKLIKELKEKSNLTEKDIEKTVVTGYGRIQYKDADKQISELSCHAKGVAFLIPGARTIIDIGGQDAKAMKLNDKGKLINFIMNDKCAAGTGRFLDVMAGVLETDVSKLGEISEKSTKEVSISSTCTVFAESEVISHLSANAKKEDIVAGIHTSVVRRVSTLAMRVGIEDQVVMVGGVARNKGIVKAMEKELGHDIKVPKLAQLTGALGAAIYAFEETK
>NZ_CP006908.1|WP_003361952.1|2199666_2201160_-|PLP-dependent-aminotransferase-family-protein
MNIKIDKTSLITITQQLVHYFSDRIMSGFIKAGQKLPSIRSLAKELGISPMTIIKAYNNLEQNGLVTTIQGKGTYVNERNSTVKSNNITEKDSFQWQMSVPDYLYRSQFRYNPNLSYSNDYYNLSVASLNHKLLPTKTILKDSLGLIQNDIKLLSQYPPAQGDYEFRNIMSQYLRLKEIATSPENILVTSGSQQGISLIASTFIGPGDIVVMETPTYPGAIDLFKCRGAVILTVPVDSEGMRTDILMNLCDKHSPKLIYTIPNFHNPTGYSMSSKRKAELLDIARYNDILIVEDDPWNEISYKREKIKSIKSMDTDGHVVYIKSLSKILGPSYRLAVIISESSILSRLIAAKANHDLGTSVLIQKTIINFIQSNKITYYIESLNKQLVKRRDKVISLLKSHAPSGMKWAIPEGGINIWVTLPKNFNVEKLLSYSITTKNISFLPGTICYPNEVEFNNLRICFTYLDEEFIEDTIIELCNLIKLLYTTKNITNYRPII
>NZ_CP006908.1|WP_003361951.1|2201483_2202404_+|PhzF-family-phenazine-biosynthesis-protein
MRKFEYTLVDVFTNQVFGGNQLAVFKDAEKLSSEEMQSIARELNLSETTFVTDIGPNHKKLRIFTPKTELPMAGHPTIGTAFVLADEGAVETREGMNKLIFEEGVGEIAVSIHVEGGGIRSIEMEQPMPVFGQVFGDIRTAAELLSLDIADIDTTSPIQTVSTGVPFLYIPLKSLDVISKIKLRLDTWEKFFSVSEDTKHIFAFTRETLHAGSTIHSRMFAPAMGIAEDPATGGASGPLGAYLVEHGLVAHGYDGKYMIINEQGIEMGRPSFINITVSKTYNNFSEIKIGGTCVKFGAGLIELPTL
>NZ_CP006908.1|WP_003361950.1|2202715_2203132_-|carboxymuconolactone-decarboxylase-family-protein
MARITFSQEGLTPFQQLLGHNKYIMGKWTSLEECFFNSNTFTHELKEEVRRTLAFNNGCQYCMSKGKPSNEITDSKILIATKIADIISKNQLIDNECFNRLKNEFSDNEVSELLALICFITASQKFGALLDLQPSCSI
>NZ_CP006908.1|WP_003361949.1|2203270_2203720_+|Lrp/AsnC-family-transcriptional-regulator
MKLDEIDVLILQELQKDSRLSIRELSKRINLSPPSVTERVRRLEDDGVIEGYTIKINKKKLGLSIDCIVKVTMKNGQYEKFKIFIKEYKRSEWCYRIAGDGCFLVKLLVKSLNDIEEFINDISSYAITETIIAFSQVTINNSINKFLGE
>NZ_CP006908.1|WP_003361948.1|2204422_2205112_+|CRISPR-associated-endoribonuclease-Cas6
MELWELIATVMLKKDIYFEDCGYIIGKNINKSMLLDKDLKEVHPKKQYKNYVFNSFYPIERDKFYKKDRLYIFNIRGLSKEFIDKIETCLCNLESNDFNVISTSKKEIKQRYIKELYTQTPLIITVDDKPWLQKDGDLDLFKQRLEDNLEKKYKSFFNEDIDVKDKFINSIEFKNRKPMHYNYKNGIKLLANKVSIQIEDNEEAQKVAFLARAVGLGEKNSAIGAGFCK
>NZ_CP006908.1|WP_003361947.1|2205173_2206079_+|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MVEGNSKIYRLKNITDLCSNNGLNNGLKKPEFRLTEIKSLMRFWWRALNFYTNASTMKKEEENIFGNSDTYKSPIIFKTESNGFKYDDGSHEVRKNNKPINCFKSGKIVEIKLSVYKRKINQKEYINKELYFYDNLLKISLILGGIGKRSRRGCGVFMLEENDKECNLKNQIKSYMENLNVNKYYEFSKENDKYLELVRKDEYRNKKFKYPYIEEIIISKEAVSEEYFYIKIKESIDATRNEKFQYKDYKCEKLACPVYVTCYGDSNELYPIIVKLYNTNQHETYDNYYKKFKEVILCSKE
>NZ_CP006908.1|WP_012720949.1|2206063_2207968_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MQQRIILFSIGSIQNFIINSRKVSDLFNSSKILSKLISNGMEFIKIRGNGELLLPQLLDKNEGLPNYFIMKYESNKHLGKELEEYIRRNYIDMLMNGSIKTSLEKYKNQIERQLDTSLDIYWVEYDLEESFDLNDSHKYAQVYYEIYKYFEAVKNVKKFNNIWEEGKKCSICGSRNAIVVSSNNKKDPFGIQKIYKYQDFTEDSLFKLIEILKNEDINLSLDEIKKVKKTACNNHLESKDIDIKLKDNEMLCSVCLLKRIYEGEKIPSLAQITLSSWIENEKKSLKCNAYNKYKETIDELNKIDCNFDVYEFMYKENWDKILKNIKIEDLEKKKKELNENFGNLNNINLPKYYCMYRMDIDNLGEWMSGKYKTSNKNLYEYQIDLSQRIYKFFNKLRENYFQENSKSILVYAGGDDLLALIPIDEIFKLEQNVRACFKEEVQVEEYKNITYSKGIFVAHYKTPLGEITRVSKEELEKVKEKFKEKANDFDKEKNATVISIMTEGYSNRNVYFKNNLNGEQTVEFIFEELVNYFNKDGSTYFHEQLQSEFWNLDRNIDKGYQRDILINMFEVEQKRLMKRSILKNSIAEEKIDEVNKKLINFLEVNSSKELKIDFENYFNLFHIIRSLKQNMEVK
>NZ_CP006908.1|WP_003361945.1|2207969_2209103_+|type-III-B-CRISPR-module-associated-protein-Cmr3
MNFDNIMQIKPNDNLFLGSGKNFSKGENTWLGTRMIPYPSVFYGAICSTMLVQNEDRRKKYIYNKDLDSDPRKYLSLGNVYLYNEEDDEVYMSAPLDLYLDEYEECHYAIIKKIKNNINCSEERMSHLFFNEIEGESQRVDDMFIKYRNFYNSYYNTNESIGIIKNSDIVTNSYKVGIERDKNYVAREKHLYRIDLTEFKKEKWSYLVEYNIKDSWWNEEIKNIKDGYLKLGGENKVCRFYTYDKNKKLMIYNNLYNQINDTEYVKMIITSPCIFEGNDYIPKFKNTEVIAASTGKPYDIGGFDMVLNIPKPMSKAVPEGSVYVLKNKDFNNTSLKEIRKIIDDEVLIDKTYKKQGFGMFELVPLDESQFEGEEIYE
>NZ_CP006908.1|WP_003361943.1|2209095_2210550_+|hypothetical-protein
MSRKVKFDSIAICSTLNQMVNYVVIKEHKLHSNNVYNIRLADENEKFNHEEWDDNLKEIIVRNYNWEDINYHNYEIKEHRNIIDKLIEKFGSDSSEFGSYPLKEEKILWNITGGQRHFVMAITEYVYNHRPEDVIVYFEGDKEKMYYYAKNKNIQQEDILRNKDYNMTIPIALRLMGFAVSKREFNKVSEYYNFLISNNANEFREKCKLQSISKINDKKPEDLYEQLESELKWYKKFYDIYCNSKTLRKLLINSNKFTTDSTGKTKFDMIKEDIKAYIKEIDNEIKSKTNTNVNVNDVFNGKGFDTLKKSIGNHLNGKVFGYILEHMTLYKVLDVIKSNKRLLENIADIDTSVKIKYETDKSKDKLGLIDEFDILIVTKKGKVVMLECKSGGMSSDNAKSHNYSIYAVAGVYGAPILVCPIKDGDVGKKETFDTKVIVSGKKACKENTDVYEHVRSAKYAADKAKLNIFYIDRIAEDIKKIIKR
>NZ_CP006908.1|WP_003361942.1|2210565_2211444_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFKGVNKILIKAITPVHAGVGRDLGLIDMPIQKEKHTGIPKIEGSTMKGSMRESYRLKKYKEKNNEDIVRKEVDKLFGPEDGHESAGIIGFTDAKLLFYPVITLDGIFAYVTCSYLLNRYFEDKALINNTEFNKKFKDLLEGECEILNNKCENVKNKIILDEYCFQETDKSSKVYEGLDLREFNLNSEKQVVVISDNDFIEIISLCREIVTRNKINPETGVVDKDTGSLFTEEYLPAESILYALVLQNGIQDKENLYDTYIENDLPNYAQIGGNATIGKGIVKITKLTESNN

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Crispr_ID: NZ_CP006908_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006908_3

2198750-2199237

TypeIII

III-B

Consensus_repeat	Method
GTTGAACATTAACATGAGATGTATTTAAAT	PILER-CR
GTTGAACATTAACATGAGATGTATTTAAAT	CRISPRCasFinder
GTTGAACATTAACATGAGATGTATTTAAAT	CRT

7 spacers

cas6,cmr1gr7,cas10,cmr3gr5,csx1,cmr4gr7

The CRISPR arrays of NZ_CP006908_3

>merge|NZ_CP006908|3|2198750-2199237|PILER-CR,CRISPRCasFinder,CRT
GTTGAACATTAACATGAGATGTATTTAAATGTTAATGTATTTTGCATTATATTTGCATTATTAATAGTTGAACATTAACATGAGATGTATTTAAATCCTTCTTTCTAAGCACATTTTATAAGTGCTTTATTGTTGAACATTAACATGAGATGTATTTAAATGTGTTAGGATCATATGCACCTATAATTTCTTCTTGTTGAACATTAACATGAGATGTATTTAAATAAGTAAAAAGATTAATAAAAAAAAGAGAAGAATAGTGTTGAACATTAACATGAGATGTATTTAAATTCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCCGTTGAACATTAACATGAGATGTATTTAAATGATGAAGAAATAAAACAAAACATTTCCAGTAAGATAGTTGAACATTAACATGAGATGTATTTAAATACTATTCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAATTTCCTTTTAGGTGCAA

>NZ_CP006908|3|1|2198750-2199172|PILER-CR
GTTGAACATTAACATGAGATGTATTTAAAT	GTTAATGTATTTTGCATTATATTTGCATTATTAATA
GTTGAACATTAACATGAGATGTATTTAAAT	CCTTCTTTCTAAGCACATTTTATAAGTGCTTTATT
GTTGAACATTAACATGAGATGTATTTAAAT	GTGTTAGGATCATATGCACCTATAATTTCTTCTT
GTTGAACATTAACATGAGATGTATTTAAAT	AAGTAAAAAGATTAATAAAAAAAAGAGAAGAATAGT
GTTGAACATTAACATGAGATGTATTTAAAT	TCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCC
GTTGAACATTAACATGAGATGTATTTAAAT	GATGAAGAAATAAAACAAAACATTTCCAGTAAGATA
GTTGAACATTAACATGAGATGTATTTAAAT

>NZ_CP006908|3|2|2198750-2199172|CRISPRCasFinder
GTTGAACATTAACATGAGATGTATTTAAAT	GTTAATGTATTTTGCATTATATTTGCATTATTAATA
GTTGAACATTAACATGAGATGTATTTAAAT	CCTTCTTTCTAAGCACATTTTATAAGTGCTTTATT
GTTGAACATTAACATGAGATGTATTTAAAT	GTGTTAGGATCATATGCACCTATAATTTCTTCTT
GTTGAACATTAACATGAGATGTATTTAAAT	AAGTAAAAAGATTAATAAAAAAAAGAGAAGAATAGT
GTTGAACATTAACATGAGATGTATTTAAAT	TCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCC
GTTGAACATTAACATGAGATGTATTTAAAT	GATGAAGAAATAAAACAAAACATTTCCAGTAAGATA
GTTGAACATTAACATGAGATGTATTTAAAT

>NZ_CP006908|3|2|2198750-2199237|CRT
GTTGAACATTAACATGAGATGTATTTAAAT	GTTAATGTATTTTGCATTATATTTGCATTATTAATA
GTTGAACATTAACATGAGATGTATTTAAAT	CCTTCTTTCTAAGCACATTTTATAAGTGCTTTATT
GTTGAACATTAACATGAGATGTATTTAAAT	GTGTTAGGATCATATGCACCTATAATTTCTTCTT
GTTGAACATTAACATGAGATGTATTTAAAT	AAGTAAAAAGATTAATAAAAAAAAGAGAAGAATAGT
GTTGAACATTAACATGAGATGTATTTAAAT	TCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCC
GTTGAACATTAACATGAGATGTATTTAAAT	GATGAAGAAATAAAACAAAACATTTCCAGTAAGATA
GTTGAACATTAACATGAGATGTATTTAAAT	ACTATTCTCCTCTTGTAGCGGGAGTTCCTATACCT
GTTGAACATTTAATTTCCTTTTAGGTGCAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006908.1\|WP_012720929.1\|2190401_2191745_+\|purine-permease	unknown	unknown	gnl\|CDD\|274468
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|273859
NZ_CP006908.1\|WP_012721174.1\|2194767_2195214_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP006908.1\|WP_079994795.1\|2195981_2196365_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133398
NZ_CP006908.1\|WP_003361951.1\|2201483_2202404_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP006908.1\|WP_003361949.1\|2203270_2203720_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP006908.1\|WP_003361950.1\|2202715_2203132_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP006908.1\|WP_012721288.1\|2196398_2197862_-\|lipase	unknown	unknown	gnl\|CDD\|335313
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP006908.1\|WP_003361943.1\|2209095_2210550_+\|hypothetical-protein	csx1	mkCas0085_csx1_CAS-III	unknown
NZ_CP006908.1\|WP_012720921.1\|2193568_2194600_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP006908.1\|WP_003361952.1\|2199666_2201160_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP006908.1\|WP_012721240.1\|2186351_2187125_+\|2-hydroxyglutaryl-CoA-dehydratase	unknown	unknown	gnl\|CDD\|224835
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP006908.1\|WP_012720846.1\|2195295_2195748_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378897
NZ_CP006908.1\|WP_012720422.1\|2187405_2188725_-\|APC-family-permease	unknown	unknown	gnl\|CDD\|223605
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|224255
NZ_CP006908.1\|WP_012720893.1\|2189064_2189964_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP006908.1\|WP_039774258.1\|2191951_2193343_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|238623

Protein	Function_ID	Function_description	E-value
NZ_CP006908.1\|WP_012720929.1\|2190401_2191745_+\|purine-permease	gnl\|CDD\|274468	TIGR03173, pbuX, xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.	7.8635e-137
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|273859	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents the region of stongest conservation, the N-terminal half, of one such family, represented by TM1795 from Thermotoga maritima. This protein is the first of a set of six genes, mostly from the RAMP superfamily, that we designated the CRISPR-associated RAMP module.	8.65634e-11
NZ_CP006908.1\|WP_012721174.1\|2194767_2195214_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.10952e-15
NZ_CP006908.1\|WP_079994795.1\|2195981_2196365_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133398	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators. Helix-turn-helix (HTH) heavy metal resistance transcription regulators (HMRTR): MerR1 (mercury), CueR (copper), CadR (cadmium), PbrR (lead), ZntR (zinc), and other related proteins. These transcription regulators mediate responses to heavy metal stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.7281e-33
NZ_CP006908.1\|WP_003361951.1\|2201483_2202404_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	1.08111e-89
NZ_CP006908.1\|WP_003361949.1\|2203270_2203720_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	5.40648e-37
NZ_CP006908.1\|WP_003361950.1\|2202715_2203132_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	2.24554e-13
NZ_CP006908.1\|WP_012721288.1\|2196398_2197862_-\|lipase	gnl\|CDD\|335313	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II. Platelet-activating factor acetylhydrolase (PAF-AH) is a subfamily of phospholipases A2, responsible for inactivation of platelet-activating factor through cleavage of an acetyl group. Three known PAF-AHs are the brain heterotrimeric PAF-AH Ib, whose catalytic beta and gamma subunits are aligned in pfam02266, the extracellular, plasma PAF-AH (pPAF-AH), and the intracellular PAF-AH isoform II (PAF-AH II). This family aligns pPAF-AH and PAF-AH II, whose similarity was previously noted.	1.11516e-17
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	8.45426e-42
NZ_CP006908.1\|WP_012720921.1\|2193568_2194600_+\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	2.64395e-90
NZ_CP006908.1\|WP_003361952.1\|2199666_2201160_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.39048e-120
NZ_CP006908.1\|WP_012721240.1\|2186351_2187125_+\|2-hydroxyglutaryl-CoA-dehydratase	gnl\|CDD\|224835	COG1924, COG1924, Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) [Lipid metabolism].	6.56628e-97
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.07531e-21
NZ_CP006908.1\|WP_012720846.1\|2195295_2195748_-\|hypothetical-protein	gnl\|CDD\|378897	pfam12638, Staygreen, Staygreen protein. This family of proteins have been implicated in chlorophyll degradation. Intriguingly members of this family are also found in non-photosynthetic bacteria.	2.63863e-82
NZ_CP006908.1\|WP_012720422.1\|2187405_2188725_-\|APC-family-permease	gnl\|CDD\|223605	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism].	6.55607e-27
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.08006e-62
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.25306e-31
NZ_CP006908.1\|WP_039774258.1\|2191951_2193343_+\|amidohydrolase	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	0

>NZ_CP006908.1|WP_012721288.1|2196398_2197862_-|lipase
MRMLEVILFLVILTTTGGILFVKPNRRLYIVFLLSVVLVMLLHGTINHFRIQMLPSYAVALVLVIVLIHRLIKSDSKHKSQSIPKSLLKKSFVSILVLIFIGTSAYLSFLLPVFTMPKPTGNYGIGTVSAHLTDESRAETLSTSPDDKREIMVNVWYPVDQKDIKGKTVEHYPSELGEAISLVFNIPKQLFTHLSQVPTHVVQGAKISTAESKYPVLLFSPGIRSTRFQSLTTIEELVSHGYIVVGLDHPYTSAKVTFPDGRSIFYKPDTKSMTASELYKHNIGNVGIRVADVSFLLDTLTKWNKKDPNALLQGKLDLERIGMFGHSYGGATTAEALAQDNRLKAGVSLEGGFWGSVSQKGLKQPFMYLMSGGTAASFDPSTIKKDKVFYKEFIPDLQSVINKSTNSTYYLTVDHFIHQSFTDISLMSPLLFAKSIDPVHNIDITRSYVRAFFDQYLKGTHSILLDGPSSKYPEVKFSDIYTKKRLN
>NZ_CP006908.1|WP_079994795.1|2195981_2196365_-|MerR-family-transcriptional-regulator
MNKMTRGELARQTGISTSTIRYYEDSGILPAPKRIANGYRIYTDDYLVKIKFIKDAKSLGYSLKEIKEILQMLSQEMDGENLKGFVKNKICEIEERIKTLHSIQRMLTDLLNTSEEDIQNYLQSFRI
>NZ_CP006908.1|WP_012720846.1|2195295_2195748_-|hypothetical-protein
MSKLNPEKLSVEFRDVVTNTEPILGRRYTLTHSDITAELFLTIGSAYAYDKINATRDEVLGEWIGKQKNYLFHVYLHVDGNNPIVTGVRNHIFRRELPLALEAIRYGDRKFFSFHPKLDNSPIIVHFISSYPSFNRIEKWGTFSDYFLKK
>NZ_CP006908.1|WP_012721174.1|2194767_2195214_+|helix-turn-helix-transcriptional-regulator
MSLGEKLLYLRKKAGLSQEDVAEKLSVSRQTVSKWETDQMVPELNKAKLLSQLYNVSYDYLISENYISGDVTGIEMIVDEIDWTGAWSKKYPILASYPGIKGINTYSEKISELYDSFKNDFGFNDTDTVLVLKDILYQKYKMEKKKTK
>NZ_CP006908.1|WP_012720921.1|2193568_2194600_+|alpha/beta-hydrolase
MKKVIKVVSVILVILVISGFFIIKNLTETKNGKLNMYVAANLQLYKILNPKSPNSKSIEETRGALNKQSTRWSNKPIPFSNIKNLHIKMNNEKIPVRIYTPEKGSNFPIIIYSHGGFWIGGNVDTIDGVCRKLSQNTKAIVISVNYRLAPENPFPAGLNDVYNVLQWTYKNGKSINGDEKHIAVVGDSAGGNLSAAVSSMSRDKNGPPITCQVLIYPSTNIFKLNSKSWSHFSNSFNVSKEDMEKYISIYAPKKEDRKKPYASPLLSKDLRKLPDTLVVTAEIDPLRDEGEAYANKLKESGVKAEVTRYKGITHGFITMDKITNKADEALNQISLYIQKEFQK
>NZ_CP006908.1|WP_039774258.1|2191951_2193343_+|amidohydrolase
MNQILIKNGYIITMDCSKKIFEKGDILVEDSKIIAIGNVESELIKSNVEIIDVNGKIIMPGLVNTHVHLSQQLARGLADDVDLLTWLRKRIWRYESNMDLEDSYISSLACCTELIRSGVTTFCEAGGQEVDGMGKAVEEAGLRGILCRSTMDCGDGLPLKWQETTEESLQKQVELLERWNGKGDGRIKYWFGLRTIFNTTDKLITKTKELADKYKVGIHMHVAEIEEEVRYAEATRGETTVQHLAKLGVLDKNFLAVHTVWLTEQEIDLFKLHNVKVSHNPGAAMKVVLGFAHIPEMLEKGINVSIGTDGAPSNNRMDMFDEMHLTSLIHKGRRLNPKVVPADEVLEMATMNGAKCALWEDEIGSLEVGKKADLIIINPKSIGSLPMHDPIGNIVYSMHSSDVESSMCNGKWLMKNKVLLTINEEDIIREAQEKATALVKKQVLSYQNVFKIERIIFKLAIIV
>NZ_CP006908.1|WP_012720929.1|2190401_2191745_+|purine-permease
MKSTKDTNLIVGIDEKISLRYAFFLGLQHVFAMDLYIVPIILAGILSLDAQNTAYFIQMSFIAAGIATLIQTGLCMRLPIMQGPSYIPIGALAAIGSKLGLQAMVGSLIPGSLFLMILGYPLRFLSKIISKFIPHIVGGTVIIIVGISLMPVAMTNIFTAPGNLKINCILALISSALLVSCMMIGRKSNKFGKAVRLTSVMISLIGGTIAASLLGVVDFTPVTKAAWFSFPKLLPFGKPVFDLKAILTMLFIYAVILVETSGTWFAVSAVTGSELTDEGLNRGAVGEGIGCFVGALFGGTPMTGYSTNAGIIAVTGVGSRMAIIAGGIILVALGMLPKLMNVIACIPSAVVSGVFAVVCVIIAMNGFKSIQHEELDERNMLLIGLPILLALGTTVLPKDILNSLPSLANYIFSSGITVGALAAVILNILLPKAPVEVSKSQEYEEAV
>NZ_CP006908.1|WP_012720893.1|2189064_2189964_-|hypothetical-protein
MSNKRNLQSIRSFYLCILIFNIVYSSIFHLNNKGFNIKLFGDLTMRSVVLFTLNSILFLCVVIAVEKKININEEIKTQVSMRIRPLYLVNIFFITYILVCIFLLKNLDVILSSFVMEIIYIGILILTKKIMTLELTDRQLQWQKACGYIDENCEKSSFLWRFKIWYSPHINVPFKNRWKRPSRLLYDLALVYGIIISKGTLFSLLLLILLFPDVLSWLEGLLGLQTSLTGICTGITEHHSKNSHVIYHKVYVTDYKNKREITFLVDGPLFIHENSNITVVHGTFSKRVLYIEGLNLDIR
>NZ_CP006908.1|WP_012720422.1|2187405_2188725_-|APC-family-permease
MLEKKYGLWTTVSMVIGIVIGSGVFFKADNILIASGGNVKTALLAWLVGAISMIFGALVFAECANRFERSNGIVDYAEGMLSEKFAYLIGWFNGIIYYPAIAAVLAWAAGNYTAILFNKDGNFVWVMAAIYMIGIYILNYISPILSGKFQIASTAIKLVPLMLIAILGIFQGLNNGILIENFSKVSTIGDSGSGFAAAVLGAAFAYEGWIIATTINGEIKDAKNTLPKALVFGSLVIVIIYILYFLGIVGMIPTETILKQGDNTVNVAARTVFGNFGASILTIFIIVSCLGTLNGLILGGSRSFYSLAIRGQGIKPEAFSKLDSKTNIPTNSTIANFILICIYLVVWYMNFKGLFPNKMFVDISELPIALIYGIYIIIYIAYMMKMKDLSFIKRFVIPSLALMGALIVVYGGLSKPSVIIDLGISVFVFLSGLLFYNKK
>NZ_CP006908.1|WP_012721240.1|2186351_2187125_+|2-hydroxyglutaryl-CoA-dehydratase
MYTMGLDIGSTTSKGVIIKDGEEIVASVLVPVGTGTSGPLKLIKELKEKSNLTEKDIEKTVVTGYGRIQYKDADKQISELSCHAKGVAFLIPGARTIIDIGGQDAKAMKLNDKGKLINFIMNDKCAAGTGRFLDVMAGVLETDVSKLGEISEKSTKEVSISSTCTVFAESEVISHLSANAKKEDIVAGIHTSVVRRVSTLAMRVGIEDQVVMVGGVARNKGIVKAMEKELGHDIKVPKLAQLTGALGAAIYAFEETK
>NZ_CP006908.1|WP_003361952.1|2199666_2201160_-|PLP-dependent-aminotransferase-family-protein
MNIKIDKTSLITITQQLVHYFSDRIMSGFIKAGQKLPSIRSLAKELGISPMTIIKAYNNLEQNGLVTTIQGKGTYVNERNSTVKSNNITEKDSFQWQMSVPDYLYRSQFRYNPNLSYSNDYYNLSVASLNHKLLPTKTILKDSLGLIQNDIKLLSQYPPAQGDYEFRNIMSQYLRLKEIATSPENILVTSGSQQGISLIASTFIGPGDIVVMETPTYPGAIDLFKCRGAVILTVPVDSEGMRTDILMNLCDKHSPKLIYTIPNFHNPTGYSMSSKRKAELLDIARYNDILIVEDDPWNEISYKREKIKSIKSMDTDGHVVYIKSLSKILGPSYRLAVIISESSILSRLIAAKANHDLGTSVLIQKTIINFIQSNKITYYIESLNKQLVKRRDKVISLLKSHAPSGMKWAIPEGGINIWVTLPKNFNVEKLLSYSITTKNISFLPGTICYPNEVEFNNLRICFTYLDEEFIEDTIIELCNLIKLLYTTKNITNYRPII
>NZ_CP006908.1|WP_003361951.1|2201483_2202404_+|PhzF-family-phenazine-biosynthesis-protein
MRKFEYTLVDVFTNQVFGGNQLAVFKDAEKLSSEEMQSIARELNLSETTFVTDIGPNHKKLRIFTPKTELPMAGHPTIGTAFVLADEGAVETREGMNKLIFEEGVGEIAVSIHVEGGGIRSIEMEQPMPVFGQVFGDIRTAAELLSLDIADIDTTSPIQTVSTGVPFLYIPLKSLDVISKIKLRLDTWEKFFSVSEDTKHIFAFTRETLHAGSTIHSRMFAPAMGIAEDPATGGASGPLGAYLVEHGLVAHGYDGKYMIINEQGIEMGRPSFINITVSKTYNNFSEIKIGGTCVKFGAGLIELPTL
>NZ_CP006908.1|WP_003361950.1|2202715_2203132_-|carboxymuconolactone-decarboxylase-family-protein
MARITFSQEGLTPFQQLLGHNKYIMGKWTSLEECFFNSNTFTHELKEEVRRTLAFNNGCQYCMSKGKPSNEITDSKILIATKIADIISKNQLIDNECFNRLKNEFSDNEVSELLALICFITASQKFGALLDLQPSCSI
>NZ_CP006908.1|WP_003361949.1|2203270_2203720_+|Lrp/AsnC-family-transcriptional-regulator
MKLDEIDVLILQELQKDSRLSIRELSKRINLSPPSVTERVRRLEDDGVIEGYTIKINKKKLGLSIDCIVKVTMKNGQYEKFKIFIKEYKRSEWCYRIAGDGCFLVKLLVKSLNDIEEFINDISSYAITETIIAFSQVTINNSINKFLGE
>NZ_CP006908.1|WP_003361948.1|2204422_2205112_+|CRISPR-associated-endoribonuclease-Cas6
MELWELIATVMLKKDIYFEDCGYIIGKNINKSMLLDKDLKEVHPKKQYKNYVFNSFYPIERDKFYKKDRLYIFNIRGLSKEFIDKIETCLCNLESNDFNVISTSKKEIKQRYIKELYTQTPLIITVDDKPWLQKDGDLDLFKQRLEDNLEKKYKSFFNEDIDVKDKFINSIEFKNRKPMHYNYKNGIKLLANKVSIQIEDNEEAQKVAFLARAVGLGEKNSAIGAGFCK
>NZ_CP006908.1|WP_003361947.1|2205173_2206079_+|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MVEGNSKIYRLKNITDLCSNNGLNNGLKKPEFRLTEIKSLMRFWWRALNFYTNASTMKKEEENIFGNSDTYKSPIIFKTESNGFKYDDGSHEVRKNNKPINCFKSGKIVEIKLSVYKRKINQKEYINKELYFYDNLLKISLILGGIGKRSRRGCGVFMLEENDKECNLKNQIKSYMENLNVNKYYEFSKENDKYLELVRKDEYRNKKFKYPYIEEIIISKEAVSEEYFYIKIKESIDATRNEKFQYKDYKCEKLACPVYVTCYGDSNELYPIIVKLYNTNQHETYDNYYKKFKEVILCSKE
>NZ_CP006908.1|WP_012720949.1|2206063_2207968_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MQQRIILFSIGSIQNFIINSRKVSDLFNSSKILSKLISNGMEFIKIRGNGELLLPQLLDKNEGLPNYFIMKYESNKHLGKELEEYIRRNYIDMLMNGSIKTSLEKYKNQIERQLDTSLDIYWVEYDLEESFDLNDSHKYAQVYYEIYKYFEAVKNVKKFNNIWEEGKKCSICGSRNAIVVSSNNKKDPFGIQKIYKYQDFTEDSLFKLIEILKNEDINLSLDEIKKVKKTACNNHLESKDIDIKLKDNEMLCSVCLLKRIYEGEKIPSLAQITLSSWIENEKKSLKCNAYNKYKETIDELNKIDCNFDVYEFMYKENWDKILKNIKIEDLEKKKKELNENFGNLNNINLPKYYCMYRMDIDNLGEWMSGKYKTSNKNLYEYQIDLSQRIYKFFNKLRENYFQENSKSILVYAGGDDLLALIPIDEIFKLEQNVRACFKEEVQVEEYKNITYSKGIFVAHYKTPLGEITRVSKEELEKVKEKFKEKANDFDKEKNATVISIMTEGYSNRNVYFKNNLNGEQTVEFIFEELVNYFNKDGSTYFHEQLQSEFWNLDRNIDKGYQRDILINMFEVEQKRLMKRSILKNSIAEEKIDEVNKKLINFLEVNSSKELKIDFENYFNLFHIIRSLKQNMEVK
>NZ_CP006908.1|WP_003361945.1|2207969_2209103_+|type-III-B-CRISPR-module-associated-protein-Cmr3
MNFDNIMQIKPNDNLFLGSGKNFSKGENTWLGTRMIPYPSVFYGAICSTMLVQNEDRRKKYIYNKDLDSDPRKYLSLGNVYLYNEEDDEVYMSAPLDLYLDEYEECHYAIIKKIKNNINCSEERMSHLFFNEIEGESQRVDDMFIKYRNFYNSYYNTNESIGIIKNSDIVTNSYKVGIERDKNYVAREKHLYRIDLTEFKKEKWSYLVEYNIKDSWWNEEIKNIKDGYLKLGGENKVCRFYTYDKNKKLMIYNNLYNQINDTEYVKMIITSPCIFEGNDYIPKFKNTEVIAASTGKPYDIGGFDMVLNIPKPMSKAVPEGSVYVLKNKDFNNTSLKEIRKIIDDEVLIDKTYKKQGFGMFELVPLDESQFEGEEIYE
>NZ_CP006908.1|WP_003361943.1|2209095_2210550_+|hypothetical-protein
MSRKVKFDSIAICSTLNQMVNYVVIKEHKLHSNNVYNIRLADENEKFNHEEWDDNLKEIIVRNYNWEDINYHNYEIKEHRNIIDKLIEKFGSDSSEFGSYPLKEEKILWNITGGQRHFVMAITEYVYNHRPEDVIVYFEGDKEKMYYYAKNKNIQQEDILRNKDYNMTIPIALRLMGFAVSKREFNKVSEYYNFLISNNANEFREKCKLQSISKINDKKPEDLYEQLESELKWYKKFYDIYCNSKTLRKLLINSNKFTTDSTGKTKFDMIKEDIKAYIKEIDNEIKSKTNTNVNVNDVFNGKGFDTLKKSIGNHLNGKVFGYILEHMTLYKVLDVIKSNKRLLENIADIDTSVKIKYETDKSKDKLGLIDEFDILIVTKKGKVVMLECKSGGMSSDNAKSHNYSIYAVAGVYGAPILVCPIKDGDVGKKETFDTKVIVSGKKACKENTDVYEHVRSAKYAADKAKLNIFYIDRIAEDIKKIIKR
>NZ_CP006908.1|WP_003361942.1|2210565_2211444_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFKGVNKILIKAITPVHAGVGRDLGLIDMPIQKEKHTGIPKIEGSTMKGSMRESYRLKKYKEKNNEDIVRKEVDKLFGPEDGHESAGIIGFTDAKLLFYPVITLDGIFAYVTCSYLLNRYFEDKALINNTEFNKKFKDLLEGECEILNNKCENVKNKIILDEYCFQETDKSSKVYEGLDLREFNLNSEKQVVVISDNDFIEIISLCREIVTRNKINPETGVVDKDTGSLFTEEYLPAESILYALVLQNGIQDKENLYDTYIENDLPNYAQIGGNATIGKGIVKITKLTESNN

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Crispr_ID: NZ_CP006908_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006908_4

2204092-2204186

TypeIII

III-B

Consensus_repeat	Method
GTTGAACATTAACATGAGATGTATTTAAAT	CRISPRCasFinder

1 spacers

cas6,cmr1gr7,cas10,cmr3gr5,csx1,cmr4gr7,cmr6gr7

The CRISPR arrays of NZ_CP006908_4

>merge|NZ_CP006908|4|2204092-2204186|CRISPRCasFinder
GTTGAACATTAACATGAGATGTATTTAAATTCATTTTGTATTGTTTTAAATAGTTGTTTTTCTTTGTTGAACATTAACATAAGATGTATTTAAAT

>NZ_CP006908|4|3|2204092-2204186|CRISPRCasFinder
GTTGAACATTAACATGAGATGTATTTAAAT	TCATTTTGTATTGTTTTAAATAGTTGTTTTTCTTT
GTTGAACATTAACATAAGATGTATTTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|273859
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP006908.1\|WP_012721174.1\|2194767_2195214_+\|helix-turn-helix-transcriptional-regulator	unknown	unknown	gnl\|CDD\|238045
NZ_CP006908.1\|WP_012720909.1\|2213647_2213941_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_079994795.1\|2195981_2196365_-\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133398
NZ_CP006908.1\|WP_003361951.1\|2201483_2202404_+\|PhzF-family-phenazine-biosynthesis-protein	unknown	unknown	gnl\|CDD\|223461
NZ_CP006908.1\|WP_003361949.1\|2203270_2203720_+\|Lrp/AsnC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224439
NZ_CP006908.1\|WP_003361950.1\|2202715_2203132_-\|carboxymuconolactone-decarboxylase-family-protein	unknown	unknown	gnl\|CDD\|225039
NZ_CP006908.1\|WP_012721288.1\|2196398_2197862_-\|lipase	unknown	unknown	gnl\|CDD\|335313
NZ_CP006908.1\|WP_003361943.1\|2209095_2210550_+\|hypothetical-protein	csx1	mkCas0085_csx1_CAS-III	unknown
NZ_CP006908.1\|WP_012720905.1\|2213988_2214786_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP006908.1\|WP_012720921.1\|2193568_2194600_+\|alpha/beta-hydrolase	unknown	unknown	gnl\|CDD\|369561
NZ_CP006908.1\|WP_003361952.1\|2199666_2201160_-\|PLP-dependent-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|224089
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP006908.1\|WP_012720846.1\|2195295_2195748_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|378897
NZ_CP006908.1\|WP_012720660.1\|2214882_2216880_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239241
NZ_CP006908.1\|WP_003361940.1\|2212038_2213073_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|224255
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP006908.1\|WP_039774258.1\|2191951_2193343_+\|amidohydrolase	unknown	unknown	gnl\|CDD\|238623

Protein	Function_ID	Function_description	E-value
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|273859	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents the region of stongest conservation, the N-terminal half, of one such family, represented by TM1795 from Thermotoga maritima. This protein is the first of a set of six genes, mostly from the RAMP superfamily, that we designated the CRISPR-associated RAMP module.	8.65634e-11
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	8.45426e-42
NZ_CP006908.1\|WP_012721174.1\|2194767_2195214_+\|helix-turn-helix-transcriptional-regulator	gnl\|CDD\|238045	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.	2.10952e-15
NZ_CP006908.1\|WP_079994795.1\|2195981_2196365_-\|MerR-family-transcriptional-regulator	gnl\|CDD\|133398	cd04770, HTH_HMRTR, Helix-Turn-Helix DNA binding domain of Heavy Metal Resistance transcription regulators. Helix-turn-helix (HTH) heavy metal resistance transcription regulators (HMRTR): MerR1 (mercury), CueR (copper), CadR (cadmium), PbrR (lead), ZntR (zinc), and other related proteins. These transcription regulators mediate responses to heavy metal stress in eubacteria. They belong to the MerR superfamily of transcription regulators that promote transcription of various stress regulons by reconfiguring the operator sequence located between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	2.7281e-33
NZ_CP006908.1\|WP_003361951.1\|2201483_2202404_+\|PhzF-family-phenazine-biosynthesis-protein	gnl\|CDD\|223461	COG0384, COG0384, Predicted epimerase, PhzC/PhzF homolog [General function prediction only].	1.08111e-89
NZ_CP006908.1\|WP_003361949.1\|2203270_2203720_+\|Lrp/AsnC-family-transcriptional-regulator	gnl\|CDD\|224439	COG1522, Lrp, Transcriptional regulators [Transcription].	5.40648e-37
NZ_CP006908.1\|WP_003361950.1\|2202715_2203132_-\|carboxymuconolactone-decarboxylase-family-protein	gnl\|CDD\|225039	COG2128, COG2128, Uncharacterized conserved protein [Function unknown].	2.24554e-13
NZ_CP006908.1\|WP_012721288.1\|2196398_2197862_-\|lipase	gnl\|CDD\|335313	pfam03403, PAF-AH_p_II, Platelet-activating factor acetylhydrolase, isoform II. Platelet-activating factor acetylhydrolase (PAF-AH) is a subfamily of phospholipases A2, responsible for inactivation of platelet-activating factor through cleavage of an acetyl group. Three known PAF-AHs are the brain heterotrimeric PAF-AH Ib, whose catalytic beta and gamma subunits are aligned in pfam02266, the extracellular, plasma PAF-AH (pPAF-AH), and the intracellular PAF-AH isoform II (PAF-AH II). This family aligns pPAF-AH and PAF-AH II, whose similarity was previously noted.	1.11516e-17
NZ_CP006908.1\|WP_012720905.1\|2213988_2214786_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.73877e-15
NZ_CP006908.1\|WP_012720921.1\|2193568_2194600_+\|alpha/beta-hydrolase	gnl\|CDD\|369561	pfam07859, Abhydrolase_3, alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes.	2.64395e-90
NZ_CP006908.1\|WP_003361952.1\|2199666_2201160_-\|PLP-dependent-aminotransferase-family-protein	gnl\|CDD\|224089	COG1167, ARO8, Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].	3.39048e-120
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.07531e-21
NZ_CP006908.1\|WP_012720846.1\|2195295_2195748_-\|hypothetical-protein	gnl\|CDD\|378897	pfam12638, Staygreen, Staygreen protein. This family of proteins have been implicated in chlorophyll degradation. Intriguingly members of this family are also found in non-photosynthetic bacteria.	2.63863e-82
NZ_CP006908.1\|WP_012720660.1\|2214882_2216880_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|239241	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.	0
NZ_CP006908.1\|WP_003361940.1\|2212038_2213073_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	5.27946e-51
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.08006e-62
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.25306e-31
NZ_CP006908.1\|WP_039774258.1\|2191951_2193343_+\|amidohydrolase	gnl\|CDD\|238623	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases. Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.	0

>NZ_CP006908.1|WP_003361949.1|2203270_2203720_+|Lrp/AsnC-family-transcriptional-regulator
MKLDEIDVLILQELQKDSRLSIRELSKRINLSPPSVTERVRRLEDDGVIEGYTIKINKKKLGLSIDCIVKVTMKNGQYEKFKIFIKEYKRSEWCYRIAGDGCFLVKLLVKSLNDIEEFINDISSYAITETIIAFSQVTINNSINKFLGE
>NZ_CP006908.1|WP_003361950.1|2202715_2203132_-|carboxymuconolactone-decarboxylase-family-protein
MARITFSQEGLTPFQQLLGHNKYIMGKWTSLEECFFNSNTFTHELKEEVRRTLAFNNGCQYCMSKGKPSNEITDSKILIATKIADIISKNQLIDNECFNRLKNEFSDNEVSELLALICFITASQKFGALLDLQPSCSI
>NZ_CP006908.1|WP_003361951.1|2201483_2202404_+|PhzF-family-phenazine-biosynthesis-protein
MRKFEYTLVDVFTNQVFGGNQLAVFKDAEKLSSEEMQSIARELNLSETTFVTDIGPNHKKLRIFTPKTELPMAGHPTIGTAFVLADEGAVETREGMNKLIFEEGVGEIAVSIHVEGGGIRSIEMEQPMPVFGQVFGDIRTAAELLSLDIADIDTTSPIQTVSTGVPFLYIPLKSLDVISKIKLRLDTWEKFFSVSEDTKHIFAFTRETLHAGSTIHSRMFAPAMGIAEDPATGGASGPLGAYLVEHGLVAHGYDGKYMIINEQGIEMGRPSFINITVSKTYNNFSEIKIGGTCVKFGAGLIELPTL
>NZ_CP006908.1|WP_003361952.1|2199666_2201160_-|PLP-dependent-aminotransferase-family-protein
MNIKIDKTSLITITQQLVHYFSDRIMSGFIKAGQKLPSIRSLAKELGISPMTIIKAYNNLEQNGLVTTIQGKGTYVNERNSTVKSNNITEKDSFQWQMSVPDYLYRSQFRYNPNLSYSNDYYNLSVASLNHKLLPTKTILKDSLGLIQNDIKLLSQYPPAQGDYEFRNIMSQYLRLKEIATSPENILVTSGSQQGISLIASTFIGPGDIVVMETPTYPGAIDLFKCRGAVILTVPVDSEGMRTDILMNLCDKHSPKLIYTIPNFHNPTGYSMSSKRKAELLDIARYNDILIVEDDPWNEISYKREKIKSIKSMDTDGHVVYIKSLSKILGPSYRLAVIISESSILSRLIAAKANHDLGTSVLIQKTIINFIQSNKITYYIESLNKQLVKRRDKVISLLKSHAPSGMKWAIPEGGINIWVTLPKNFNVEKLLSYSITTKNISFLPGTICYPNEVEFNNLRICFTYLDEEFIEDTIIELCNLIKLLYTTKNITNYRPII
>NZ_CP006908.1|WP_012721288.1|2196398_2197862_-|lipase
MRMLEVILFLVILTTTGGILFVKPNRRLYIVFLLSVVLVMLLHGTINHFRIQMLPSYAVALVLVIVLIHRLIKSDSKHKSQSIPKSLLKKSFVSILVLIFIGTSAYLSFLLPVFTMPKPTGNYGIGTVSAHLTDESRAETLSTSPDDKREIMVNVWYPVDQKDIKGKTVEHYPSELGEAISLVFNIPKQLFTHLSQVPTHVVQGAKISTAESKYPVLLFSPGIRSTRFQSLTTIEELVSHGYIVVGLDHPYTSAKVTFPDGRSIFYKPDTKSMTASELYKHNIGNVGIRVADVSFLLDTLTKWNKKDPNALLQGKLDLERIGMFGHSYGGATTAEALAQDNRLKAGVSLEGGFWGSVSQKGLKQPFMYLMSGGTAASFDPSTIKKDKVFYKEFIPDLQSVINKSTNSTYYLTVDHFIHQSFTDISLMSPLLFAKSIDPVHNIDITRSYVRAFFDQYLKGTHSILLDGPSSKYPEVKFSDIYTKKRLN
>NZ_CP006908.1|WP_079994795.1|2195981_2196365_-|MerR-family-transcriptional-regulator
MNKMTRGELARQTGISTSTIRYYEDSGILPAPKRIANGYRIYTDDYLVKIKFIKDAKSLGYSLKEIKEILQMLSQEMDGENLKGFVKNKICEIEERIKTLHSIQRMLTDLLNTSEEDIQNYLQSFRI
>NZ_CP006908.1|WP_012720846.1|2195295_2195748_-|hypothetical-protein
MSKLNPEKLSVEFRDVVTNTEPILGRRYTLTHSDITAELFLTIGSAYAYDKINATRDEVLGEWIGKQKNYLFHVYLHVDGNNPIVTGVRNHIFRRELPLALEAIRYGDRKFFSFHPKLDNSPIIVHFISSYPSFNRIEKWGTFSDYFLKK
>NZ_CP006908.1|WP_012721174.1|2194767_2195214_+|helix-turn-helix-transcriptional-regulator
MSLGEKLLYLRKKAGLSQEDVAEKLSVSRQTVSKWETDQMVPELNKAKLLSQLYNVSYDYLISENYISGDVTGIEMIVDEIDWTGAWSKKYPILASYPGIKGINTYSEKISELYDSFKNDFGFNDTDTVLVLKDILYQKYKMEKKKTK
>NZ_CP006908.1|WP_012720921.1|2193568_2194600_+|alpha/beta-hydrolase
MKKVIKVVSVILVILVISGFFIIKNLTETKNGKLNMYVAANLQLYKILNPKSPNSKSIEETRGALNKQSTRWSNKPIPFSNIKNLHIKMNNEKIPVRIYTPEKGSNFPIIIYSHGGFWIGGNVDTIDGVCRKLSQNTKAIVISVNYRLAPENPFPAGLNDVYNVLQWTYKNGKSINGDEKHIAVVGDSAGGNLSAAVSSMSRDKNGPPITCQVLIYPSTNIFKLNSKSWSHFSNSFNVSKEDMEKYISIYAPKKEDRKKPYASPLLSKDLRKLPDTLVVTAEIDPLRDEGEAYANKLKESGVKAEVTRYKGITHGFITMDKITNKADEALNQISLYIQKEFQK
>NZ_CP006908.1|WP_039774258.1|2191951_2193343_+|amidohydrolase
MNQILIKNGYIITMDCSKKIFEKGDILVEDSKIIAIGNVESELIKSNVEIIDVNGKIIMPGLVNTHVHLSQQLARGLADDVDLLTWLRKRIWRYESNMDLEDSYISSLACCTELIRSGVTTFCEAGGQEVDGMGKAVEEAGLRGILCRSTMDCGDGLPLKWQETTEESLQKQVELLERWNGKGDGRIKYWFGLRTIFNTTDKLITKTKELADKYKVGIHMHVAEIEEEVRYAEATRGETTVQHLAKLGVLDKNFLAVHTVWLTEQEIDLFKLHNVKVSHNPGAAMKVVLGFAHIPEMLEKGINVSIGTDGAPSNNRMDMFDEMHLTSLIHKGRRLNPKVVPADEVLEMATMNGAKCALWEDEIGSLEVGKKADLIIINPKSIGSLPMHDPIGNIVYSMHSSDVESSMCNGKWLMKNKVLLTINEEDIIREAQEKATALVKKQVLSYQNVFKIERIIFKLAIIV
>NZ_CP006908.1|WP_003361948.1|2204422_2205112_+|CRISPR-associated-endoribonuclease-Cas6
MELWELIATVMLKKDIYFEDCGYIIGKNINKSMLLDKDLKEVHPKKQYKNYVFNSFYPIERDKFYKKDRLYIFNIRGLSKEFIDKIETCLCNLESNDFNVISTSKKEIKQRYIKELYTQTPLIITVDDKPWLQKDGDLDLFKQRLEDNLEKKYKSFFNEDIDVKDKFINSIEFKNRKPMHYNYKNGIKLLANKVSIQIEDNEEAQKVAFLARAVGLGEKNSAIGAGFCK
>NZ_CP006908.1|WP_003361947.1|2205173_2206079_+|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MVEGNSKIYRLKNITDLCSNNGLNNGLKKPEFRLTEIKSLMRFWWRALNFYTNASTMKKEEENIFGNSDTYKSPIIFKTESNGFKYDDGSHEVRKNNKPINCFKSGKIVEIKLSVYKRKINQKEYINKELYFYDNLLKISLILGGIGKRSRRGCGVFMLEENDKECNLKNQIKSYMENLNVNKYYEFSKENDKYLELVRKDEYRNKKFKYPYIEEIIISKEAVSEEYFYIKIKESIDATRNEKFQYKDYKCEKLACPVYVTCYGDSNELYPIIVKLYNTNQHETYDNYYKKFKEVILCSKE
>NZ_CP006908.1|WP_012720949.1|2206063_2207968_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MQQRIILFSIGSIQNFIINSRKVSDLFNSSKILSKLISNGMEFIKIRGNGELLLPQLLDKNEGLPNYFIMKYESNKHLGKELEEYIRRNYIDMLMNGSIKTSLEKYKNQIERQLDTSLDIYWVEYDLEESFDLNDSHKYAQVYYEIYKYFEAVKNVKKFNNIWEEGKKCSICGSRNAIVVSSNNKKDPFGIQKIYKYQDFTEDSLFKLIEILKNEDINLSLDEIKKVKKTACNNHLESKDIDIKLKDNEMLCSVCLLKRIYEGEKIPSLAQITLSSWIENEKKSLKCNAYNKYKETIDELNKIDCNFDVYEFMYKENWDKILKNIKIEDLEKKKKELNENFGNLNNINLPKYYCMYRMDIDNLGEWMSGKYKTSNKNLYEYQIDLSQRIYKFFNKLRENYFQENSKSILVYAGGDDLLALIPIDEIFKLEQNVRACFKEEVQVEEYKNITYSKGIFVAHYKTPLGEITRVSKEELEKVKEKFKEKANDFDKEKNATVISIMTEGYSNRNVYFKNNLNGEQTVEFIFEELVNYFNKDGSTYFHEQLQSEFWNLDRNIDKGYQRDILINMFEVEQKRLMKRSILKNSIAEEKIDEVNKKLINFLEVNSSKELKIDFENYFNLFHIIRSLKQNMEVK
>NZ_CP006908.1|WP_003361945.1|2207969_2209103_+|type-III-B-CRISPR-module-associated-protein-Cmr3
MNFDNIMQIKPNDNLFLGSGKNFSKGENTWLGTRMIPYPSVFYGAICSTMLVQNEDRRKKYIYNKDLDSDPRKYLSLGNVYLYNEEDDEVYMSAPLDLYLDEYEECHYAIIKKIKNNINCSEERMSHLFFNEIEGESQRVDDMFIKYRNFYNSYYNTNESIGIIKNSDIVTNSYKVGIERDKNYVAREKHLYRIDLTEFKKEKWSYLVEYNIKDSWWNEEIKNIKDGYLKLGGENKVCRFYTYDKNKKLMIYNNLYNQINDTEYVKMIITSPCIFEGNDYIPKFKNTEVIAASTGKPYDIGGFDMVLNIPKPMSKAVPEGSVYVLKNKDFNNTSLKEIRKIIDDEVLIDKTYKKQGFGMFELVPLDESQFEGEEIYE
>NZ_CP006908.1|WP_003361943.1|2209095_2210550_+|hypothetical-protein
MSRKVKFDSIAICSTLNQMVNYVVIKEHKLHSNNVYNIRLADENEKFNHEEWDDNLKEIIVRNYNWEDINYHNYEIKEHRNIIDKLIEKFGSDSSEFGSYPLKEEKILWNITGGQRHFVMAITEYVYNHRPEDVIVYFEGDKEKMYYYAKNKNIQQEDILRNKDYNMTIPIALRLMGFAVSKREFNKVSEYYNFLISNNANEFREKCKLQSISKINDKKPEDLYEQLESELKWYKKFYDIYCNSKTLRKLLINSNKFTTDSTGKTKFDMIKEDIKAYIKEIDNEIKSKTNTNVNVNDVFNGKGFDTLKKSIGNHLNGKVFGYILEHMTLYKVLDVIKSNKRLLENIADIDTSVKIKYETDKSKDKLGLIDEFDILIVTKKGKVVMLECKSGGMSSDNAKSHNYSIYAVAGVYGAPILVCPIKDGDVGKKETFDTKVIVSGKKACKENTDVYEHVRSAKYAADKAKLNIFYIDRIAEDIKKIIKR
>NZ_CP006908.1|WP_003361942.1|2210565_2211444_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFKGVNKILIKAITPVHAGVGRDLGLIDMPIQKEKHTGIPKIEGSTMKGSMRESYRLKKYKEKNNEDIVRKEVDKLFGPEDGHESAGIIGFTDAKLLFYPVITLDGIFAYVTCSYLLNRYFEDKALINNTEFNKKFKDLLEGECEILNNKCENVKNKIILDEYCFQETDKSSKVYEGLDLREFNLNSEKQVVVISDNDFIEIISLCREIVTRNKINPETGVVDKDTGSLFTEEYLPAESILYALVLQNGIQDKENLYDTYIENDLPNYAQIGGNATIGKGIVKITKLTESNN
>NZ_CP006908.1|WP_003361940.1|2212038_2213073_+|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MGSKQDECNLIYSLQRNIVRESGSKKERRYLGKIETNNEKIKCIREIQRLKPYYHQSIVKEYIKSIKKYCRELNFLVNEMEGITSYRLVVGLGNPSVTETSMTLHNIYGIPYIPGQALKGITRSYFLQKYFDIEKKEFGIIKINAAEFKAKELYKIIFGDDYYGEANEKGSIIFFDAFPVSDEIIIEKDVMTPHYSNYYGKGWNPTDEFSTNPIPFYTVKNTKFNFLFALIKEEIRMNEEKIIYAEDLKNFVSKLIKEALEEHGVGAKTSVGYGYFNDVKVIEDKKTKKRLSPNDIQLQLNQINKILDKNKKHEAIMNFYANNDVSKLGKEQKSQLAKYMKECL
>NZ_CP006908.1|WP_012720909.1|2213647_2213941_+|hypothetical-protein
MNFFTLNILIGAMAFIINKINNMSQDIDPFEAFNDIEENLEEIDNEKVTNFVNGLINASMSNPSIGYFFMFLVYMTPILNLLLLIKGIVNYFNRAAG
>NZ_CP006908.1|WP_012720905.1|2213988_2214786_+|MerR-family-transcriptional-regulator
MRYSITDLAEILGCTTSAIHYFEKEHLIEVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEGREAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQLGVFDSRMGMSNFGYMVKTKKREELELPLGLHAKEIKSTSCIHTIVMADEDFTQQPQKVFKKASQFVIKKGLEIGEIAWGKILLVEVEKGAKLHPYIELWVSIKI
>NZ_CP006908.1|WP_012720660.1|2214882_2216880_+|FAD-dependent-oxidoreductase
MKDKYKVLYDPIKIGKLEIKNRYVLAPMGPGGMCNADGSFNKRGIEFYVERAKGGTGLIMTGVTMVENNIEKCALPSMPCPTINPLNFITTGNEMTERVHAYGAKIFLQLSAGFGRVSIPSIVGKVAVAPSKIPHRFLPGVTCRELTTEEVKEYVKAFGDSAEIAKKAGFDGVEIHAVHEGYLLDQFAISFFNHRTDEYGGSLENRLRFACEVVQEIKKRCGQDFPVSLRYSIKSFIKDWCKGGLPDEEFEEKGRDIPEGIEAAKILVAAGYDALNGDVGSYDSWYWSHPPMYQKKGLYLPYNEILKKVVDVPIITAGRMEDPELSSDAILSGKTDMIALGRPLLADAEIPNKIFEDKYDKVRPCLSCQEGCMGRLQNFATVSCAVNPACGREKEYGLKKAEQIKKVLVVGGGVAGMEAARVAAIRGHKVTLIEKNGYLGGNIVPGGVPDFKDDDRALVKWYEGILKDLGVEIKLNVDASKENIKEFGADEVLLATGSSPRTLTIEGADKVYSAEDVLMERKNVGEKVIIIGGGLVGCETALWLKQQGKEVTIVEMQNDILQVGGPLCHANHDMLVDLIKFNKIDVKTSSYISKKTDEGFVLNTNGEESIINADSAVVAIGYLSEKDLYNQVRFDIPNARLIGDANKVQNIMYAIWSAYEVAKNI

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Crispr_ID: NZ_CP006908_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006908_5

2217480-2217639

TypeIII

III-B

Consensus_repeat	Method
TTGAACATTAACATAAGATGTATTTAAAT	CRISPRCasFinder

2 spacers

cmr6gr7,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6

The CRISPR arrays of NZ_CP006908_5

>merge|NZ_CP006908|5|2217480-2217639|CRISPRCasFinder
TTGAACATTAACATAAGATGTATTTAAATATCATCTTCATTAATTGATCTATATTAATTTGTGCATTGAACATTAACATAAGATGTATTTAAATTTGCTTTTTATAAAAGTATCTAGTTTTTTATTTATATTGAACATTAACATAAGATGTATTTAAGCA

>NZ_CP006908|5|4|2217480-2217639|CRISPRCasFinder
TTGAACATTAACATAAGATGTATTTAAAT	ATCATCTTCATTAATTGATCTATATTAATTTGTGCA
TTGAACATTAACATAAGATGTATTTAAAT	TTGCTTTTTATAAAAGTATCTAGTTTTTTATTTATA
TTGAACATTAACATAAGATGTATTTAAGCA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|273859
NZ_CP006908.1\|WP_003361931.1\|2220698_2221439_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP006908.1\|WP_012721052.1\|2221542_2222949_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|340904
NZ_CP006908.1\|WP_162266051.1\|2224733_2225126_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_012720909.1\|2213647_2213941_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_003361924.1\|2225163_2225652_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_003361943.1\|2209095_2210550_+\|hypothetical-protein	csx1	mkCas0085_csx1_CAS-III	unknown
NZ_CP006908.1\|WP_012721146.1\|2218972_2219494_-\|DUF4825-domain-containing-protein	unknown	unknown	gnl\|CDD\|379767
NZ_CP006908.1\|WP_003361932.1\|2219801_2220692_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP006908.1\|WP_012720962.1\|2223956_2224571_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP006908.1\|WP_003361940.1\|2212038_2213073_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP006908.1\|WP_012720905.1\|2213988_2214786_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP006908.1\|WP_012720660.1\|2214882_2216880_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239241
NZ_CP006908.1\|WP_033063258.1\|2223279_2223633_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379790
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|224255
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP006908.1\|WP_003361923.1\|2226308_2226902_+\|glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|172889
NZ_CP006908.1\|WP_003361929.1\|2223022_2223196_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238518

Protein	Function_ID	Function_description	E-value
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	8.45426e-42
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|273859	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents the region of stongest conservation, the N-terminal half, of one such family, represented by TM1795 from Thermotoga maritima. This protein is the first of a set of six genes, mostly from the RAMP superfamily, that we designated the CRISPR-associated RAMP module.	8.65634e-11
NZ_CP006908.1\|WP_003361931.1\|2220698_2221439_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.04663e-13
NZ_CP006908.1\|WP_012721052.1\|2221542_2222949_-\|peptide-MFS-transporter	gnl\|CDD\|340904	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters. The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.35095e-120
NZ_CP006908.1\|WP_012721146.1\|2218972_2219494_-\|DUF4825-domain-containing-protein	gnl\|CDD\|379767	pfam16107, DUF4825, Domain of unknown function (DUF4825). This domain forms the N-terminal, extracellular domain of some homologs of Staph BlaR1 proteases, where it replaces the penicillin-binding domain of BlaR1. It is also found in many uncharacterized proteins in a broad range of bacteria. Its association with BlaR1 homologs suggests it may be involved in substrate-, possibly antibiotic-binding, but this prediction has not been verified experimentally.	2.28795e-25
NZ_CP006908.1\|WP_003361932.1\|2219801_2220692_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	9.25706e-29
NZ_CP006908.1\|WP_012720962.1\|2223956_2224571_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	1.14834e-99
NZ_CP006908.1\|WP_003361940.1\|2212038_2213073_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	5.27946e-51
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.07531e-21
NZ_CP006908.1\|WP_012720905.1\|2213988_2214786_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.73877e-15
NZ_CP006908.1\|WP_012720660.1\|2214882_2216880_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|239241	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.	0
NZ_CP006908.1\|WP_033063258.1\|2223279_2223633_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	gnl\|CDD\|379790	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain.	9.44395e-11
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.08006e-62
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.25306e-31
NZ_CP006908.1\|WP_003361923.1\|2226308_2226902_+\|glycerol-3-phosphate-acyltransferase	gnl\|CDD\|172889	PRK14413, PRK14413, glycerol-3-phosphate acyltransferase.	9.58967e-96
NZ_CP006908.1\|WP_003361929.1\|2223022_2223196_-\|hypothetical-protein	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	2.13829e-09

>NZ_CP006908.1|WP_012720660.1|2214882_2216880_+|FAD-dependent-oxidoreductase
MKDKYKVLYDPIKIGKLEIKNRYVLAPMGPGGMCNADGSFNKRGIEFYVERAKGGTGLIMTGVTMVENNIEKCALPSMPCPTINPLNFITTGNEMTERVHAYGAKIFLQLSAGFGRVSIPSIVGKVAVAPSKIPHRFLPGVTCRELTTEEVKEYVKAFGDSAEIAKKAGFDGVEIHAVHEGYLLDQFAISFFNHRTDEYGGSLENRLRFACEVVQEIKKRCGQDFPVSLRYSIKSFIKDWCKGGLPDEEFEEKGRDIPEGIEAAKILVAAGYDALNGDVGSYDSWYWSHPPMYQKKGLYLPYNEILKKVVDVPIITAGRMEDPELSSDAILSGKTDMIALGRPLLADAEIPNKIFEDKYDKVRPCLSCQEGCMGRLQNFATVSCAVNPACGREKEYGLKKAEQIKKVLVVGGGVAGMEAARVAAIRGHKVTLIEKNGYLGGNIVPGGVPDFKDDDRALVKWYEGILKDLGVEIKLNVDASKENIKEFGADEVLLATGSSPRTLTIEGADKVYSAEDVLMERKNVGEKVIIIGGGLVGCETALWLKQQGKEVTIVEMQNDILQVGGPLCHANHDMLVDLIKFNKIDVKTSSYISKKTDEGFVLNTNGEESIINADSAVVAIGYLSEKDLYNQVRFDIPNARLIGDANKVQNIMYAIWSAYEVAKNI
>NZ_CP006908.1|WP_012720905.1|2213988_2214786_+|MerR-family-transcriptional-regulator
MRYSITDLAEILGCTTSAIHYFEKEHLIEVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEGREAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQLGVFDSRMGMSNFGYMVKTKKREELELPLGLHAKEIKSTSCIHTIVMADEDFTQQPQKVFKKASQFVIKKGLEIGEIAWGKILLVEVEKGAKLHPYIELWVSIKI
>NZ_CP006908.1|WP_012720909.1|2213647_2213941_+|hypothetical-protein
MNFFTLNILIGAMAFIINKINNMSQDIDPFEAFNDIEENLEEIDNEKVTNFVNGLINASMSNPSIGYFFMFLVYMTPILNLLLLIKGIVNYFNRAAG
>NZ_CP006908.1|WP_003361940.1|2212038_2213073_+|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MGSKQDECNLIYSLQRNIVRESGSKKERRYLGKIETNNEKIKCIREIQRLKPYYHQSIVKEYIKSIKKYCRELNFLVNEMEGITSYRLVVGLGNPSVTETSMTLHNIYGIPYIPGQALKGITRSYFLQKYFDIEKKEFGIIKINAAEFKAKELYKIIFGDDYYGEANEKGSIIFFDAFPVSDEIIIEKDVMTPHYSNYYGKGWNPTDEFSTNPIPFYTVKNTKFNFLFALIKEEIRMNEEKIIYAEDLKNFVSKLIKEALEEHGVGAKTSVGYGYFNDVKVIEDKKTKKRLSPNDIQLQLNQINKILDKNKKHEAIMNFYANNDVSKLGKEQKSQLAKYMKECL
>NZ_CP006908.1|WP_003361942.1|2210565_2211444_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFKGVNKILIKAITPVHAGVGRDLGLIDMPIQKEKHTGIPKIEGSTMKGSMRESYRLKKYKEKNNEDIVRKEVDKLFGPEDGHESAGIIGFTDAKLLFYPVITLDGIFAYVTCSYLLNRYFEDKALINNTEFNKKFKDLLEGECEILNNKCENVKNKIILDEYCFQETDKSSKVYEGLDLREFNLNSEKQVVVISDNDFIEIISLCREIVTRNKINPETGVVDKDTGSLFTEEYLPAESILYALVLQNGIQDKENLYDTYIENDLPNYAQIGGNATIGKGIVKITKLTESNN
>NZ_CP006908.1|WP_003361943.1|2209095_2210550_+|hypothetical-protein
MSRKVKFDSIAICSTLNQMVNYVVIKEHKLHSNNVYNIRLADENEKFNHEEWDDNLKEIIVRNYNWEDINYHNYEIKEHRNIIDKLIEKFGSDSSEFGSYPLKEEKILWNITGGQRHFVMAITEYVYNHRPEDVIVYFEGDKEKMYYYAKNKNIQQEDILRNKDYNMTIPIALRLMGFAVSKREFNKVSEYYNFLISNNANEFREKCKLQSISKINDKKPEDLYEQLESELKWYKKFYDIYCNSKTLRKLLINSNKFTTDSTGKTKFDMIKEDIKAYIKEIDNEIKSKTNTNVNVNDVFNGKGFDTLKKSIGNHLNGKVFGYILEHMTLYKVLDVIKSNKRLLENIADIDTSVKIKYETDKSKDKLGLIDEFDILIVTKKGKVVMLECKSGGMSSDNAKSHNYSIYAVAGVYGAPILVCPIKDGDVGKKETFDTKVIVSGKKACKENTDVYEHVRSAKYAADKAKLNIFYIDRIAEDIKKIIKR
>NZ_CP006908.1|WP_003361945.1|2207969_2209103_+|type-III-B-CRISPR-module-associated-protein-Cmr3
MNFDNIMQIKPNDNLFLGSGKNFSKGENTWLGTRMIPYPSVFYGAICSTMLVQNEDRRKKYIYNKDLDSDPRKYLSLGNVYLYNEEDDEVYMSAPLDLYLDEYEECHYAIIKKIKNNINCSEERMSHLFFNEIEGESQRVDDMFIKYRNFYNSYYNTNESIGIIKNSDIVTNSYKVGIERDKNYVAREKHLYRIDLTEFKKEKWSYLVEYNIKDSWWNEEIKNIKDGYLKLGGENKVCRFYTYDKNKKLMIYNNLYNQINDTEYVKMIITSPCIFEGNDYIPKFKNTEVIAASTGKPYDIGGFDMVLNIPKPMSKAVPEGSVYVLKNKDFNNTSLKEIRKIIDDEVLIDKTYKKQGFGMFELVPLDESQFEGEEIYE
>NZ_CP006908.1|WP_012720949.1|2206063_2207968_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MQQRIILFSIGSIQNFIINSRKVSDLFNSSKILSKLISNGMEFIKIRGNGELLLPQLLDKNEGLPNYFIMKYESNKHLGKELEEYIRRNYIDMLMNGSIKTSLEKYKNQIERQLDTSLDIYWVEYDLEESFDLNDSHKYAQVYYEIYKYFEAVKNVKKFNNIWEEGKKCSICGSRNAIVVSSNNKKDPFGIQKIYKYQDFTEDSLFKLIEILKNEDINLSLDEIKKVKKTACNNHLESKDIDIKLKDNEMLCSVCLLKRIYEGEKIPSLAQITLSSWIENEKKSLKCNAYNKYKETIDELNKIDCNFDVYEFMYKENWDKILKNIKIEDLEKKKKELNENFGNLNNINLPKYYCMYRMDIDNLGEWMSGKYKTSNKNLYEYQIDLSQRIYKFFNKLRENYFQENSKSILVYAGGDDLLALIPIDEIFKLEQNVRACFKEEVQVEEYKNITYSKGIFVAHYKTPLGEITRVSKEELEKVKEKFKEKANDFDKEKNATVISIMTEGYSNRNVYFKNNLNGEQTVEFIFEELVNYFNKDGSTYFHEQLQSEFWNLDRNIDKGYQRDILINMFEVEQKRLMKRSILKNSIAEEKIDEVNKKLINFLEVNSSKELKIDFENYFNLFHIIRSLKQNMEVK
>NZ_CP006908.1|WP_003361947.1|2205173_2206079_+|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MVEGNSKIYRLKNITDLCSNNGLNNGLKKPEFRLTEIKSLMRFWWRALNFYTNASTMKKEEENIFGNSDTYKSPIIFKTESNGFKYDDGSHEVRKNNKPINCFKSGKIVEIKLSVYKRKINQKEYINKELYFYDNLLKISLILGGIGKRSRRGCGVFMLEENDKECNLKNQIKSYMENLNVNKYYEFSKENDKYLELVRKDEYRNKKFKYPYIEEIIISKEAVSEEYFYIKIKESIDATRNEKFQYKDYKCEKLACPVYVTCYGDSNELYPIIVKLYNTNQHETYDNYYKKFKEVILCSKE
>NZ_CP006908.1|WP_003361948.1|2204422_2205112_+|CRISPR-associated-endoribonuclease-Cas6
MELWELIATVMLKKDIYFEDCGYIIGKNINKSMLLDKDLKEVHPKKQYKNYVFNSFYPIERDKFYKKDRLYIFNIRGLSKEFIDKIETCLCNLESNDFNVISTSKKEIKQRYIKELYTQTPLIITVDDKPWLQKDGDLDLFKQRLEDNLEKKYKSFFNEDIDVKDKFINSIEFKNRKPMHYNYKNGIKLLANKVSIQIEDNEEAQKVAFLARAVGLGEKNSAIGAGFCK
>NZ_CP006908.1|WP_012721146.1|2218972_2219494_-|DUF4825-domain-containing-protein
MKNKFRILVPLVLILSLNLIGCGVNYEKKSKENIKNSSKVETYDLIKYKGSYVGDNSSVGSIIKNLPANEYSAGFSLQTSKKPYEITVNYKANENLGEENYNKFWKDNKVEKLLEKNAAVLLSLIPNAEIIKFNVENIGKESYKYDRKNLDQKYGNLKNLFKDNDSLNKFLNN
>NZ_CP006908.1|WP_003361932.1|2219801_2220692_+|AraC-family-transcriptional-regulator
MNYRKDIENCIDYIEEHIKEPLTLKEITQEIGYSSYHFCRVFSFLKGMPLMEYVRKRKLSLSTIDLLEGKKIIDVALKWGFETPSSFARAFRKEFGCSPSQYIKKMKSYYKSENNLILSKFMNDPYIVKKHGFKVAGYGIKTNVADSKYTKDVASFWSNYNGENLESKLYKILSPLKHGEVGLCIPCSDSGDVTYLLGVIVEDFSKVTSDMITVEVPKAQYAVFTTNPVNTVESKDQREFAKIIKESWKYIFDEWFKNDDYEYDEEKLDFEFYDERCHLRPDTVMDIYVPIKKFER
>NZ_CP006908.1|WP_003361931.1|2220698_2221439_+|class-I-SAM-dependent-methyltransferase
MINYYGSLCTVMYELLHPHAPEDELQFYLQYAKKEMKILEPLCGSGRFLVPFLERGFNITGFDMSEEMLKELYKKAPKAKVFQSSIEEFSPKEKYDYIFITSGSFSLFLDRDIAFNVLEKMREALAPKGKFVFAAETTANIIPDREEYLKNCHVKTKEGYDIIFKSKSFYDKHKKILSTPSLYELYDGDKLLRKEEMDFRIKLYDFGELDKLILKAGFKGSYVFSDFKKSKPVDRNSETFLYECYI
>NZ_CP006908.1|WP_012721052.1|2221542_2222949_-|peptide-MFS-transporter
MSEKKQKHPIGLWLVNISIALQSYAAYAVVSILILFLTADVSKNGLGLSVPKAAAIIGLYQGINYMGSLVGGYITDKWLGIQKSLILGCFLTACGYLALFFAKPNIGSVWLGLIILIVAGAFFKAQISSLVGELYGKNELSKKDAAYSIFYMFINIGAFFGPIIAGLISDKWFAKVAADGEIAAYGYKYIFLMCTLIMIFIGIFIWIVSPKWLGEVGKYPVSKDKKNSTESVSTKSTEKAKAQPLTQLEKNRIKAMIVMFVFVIIFWSAWDQTATSFSLLANKLVNRTIGGFTMPVPWLTSINAIFCVVLSPIIANIWLKLGNSKKGDLSVPTKMGLGMILTGIAFLTLILGISTLGGVLDGSKQMNILFIIVAYFLLTVGELCLSPIGMAMFNKLAPAKYGSLAMGAWYLSFFFSSIISGKLAGFTDTLGYTQIFGLISGIVIVFGVILILLRNGLLKLMSLDELDK
>NZ_CP006908.1|WP_003361929.1|2223022_2223196_-|hypothetical-protein
MNIHEASTGFRWQYRPKEIHRFEEGIVITDEPEIYIAGSHGIRIENELIVCKGENNG
>NZ_CP006908.1|WP_033063258.1|2223279_2223633_-|aminopeptidase-P-family-N-terminal-domain-containing-protein
MYLFINKNKLSDEIKSSLKKNAALFIHPYNKIYKEVKKFTNSDVVLVHTDRMNYALYNNIDKEVITEISSSNKLDAFPAEQGRFIRPSFEPISSFGEHATIVTCILLMENSFMIVTV
>NZ_CP006908.1|WP_012720962.1|2223956_2224571_+|sugar-O-acetyltransferase
MNQKDRMLAGLPYKAWLDGLPEERMANKKKIYEYNHCLPDEHEKIHKLIRDILGKAGADVHIEAPFYCDYGKNIEVGDNFFANYNCIILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSRNSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGSVVTKDIPDNVIAIGNPCKVIREITEKDRKYYYKNYEFDVDDYKE
>NZ_CP006908.1|WP_162266051.1|2224733_2225126_+|hypothetical-protein
MESLPQYKDVIQKKEKKHLTVKIIAVFMFAIILAVVAYFSGAKSFSKAYIHVFTLFSVVNIYDMIVLDIGLFCHSKKTRIPGTEDMDKEYRSPWYWNYNRRCSSIIIWRNGSFHINNIVFKQGTQISDLV
>NZ_CP006908.1|WP_003361924.1|2225163_2225652_-|hypothetical-protein
MISKKILAFIAMTIMMISLLIGCSNNTMDKVYNDNSKIASVYDIFGLDKSDEIIESGIYKGKLKLSGSGTIWAYESSSDFDLKVPYILSVKSGKAKIVLISPDNTVVNLVENTDKATMKETTSLTLPIKKGNNRIKLVGYKKADIDIELHIEKGTFEKISFN
>NZ_CP006908.1|WP_003361923.1|2226308_2226902_+|glycerol-3-phosphate-acyltransferase
MIIIITSVISFLLGSIPTGYFITKKTCGIDIRTKGSGNIGSTNVKRIVGTKISIITQIIDVLKGIIPVVLGIYLSKIVKLPVSTNTYLSTIAIAAILGHDYTPFLKFKGGKGVNTTLGVFIFIAPIPTLTGLAVYFILGLFTSIVSIRSIAIGITIPIMCIITKLPIQIIISTTIAGILMVFRHKDNLVRIMRKEEK

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Crispr_ID: NZ_CP006908_6

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006908_6

2217919-2218406

TypeIII

III-B

Consensus_repeat	Method
GTTGAACANTAACATNNGATGTATTTAAAT	CRT
TTGAACATTAACATAAGATGTATTTAAAT	CRISPRCasFinder
TTGAACATTAACATAAGATGTATTTAAAT	PILER-CR

7 spacers

cmr6gr7,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6

The CRISPR arrays of NZ_CP006908_6

>merge|NZ_CP006908|6|2217919-2218406|CRT,CRISPRCasFinder,PILER-CR
GTTGAACATTAACATGAGATGTATTTAAATCAATATTCACATTCTCTAATTGTTTTATATTTCCATGTTGAACAATAACATAGGATGTATTTAAATATTGGCACGTAAGACGAATTCTGTGAAAAATGGGGTTGAACAATAACATAGGATGTATTTAAATTACCATTACTTATATTTAAAGCTTTAGCTGCCTTTTTGTTGAAGCTTAACATGAGATGTATTTAAATACGATATCGGCACTGTATTTGATGGCGTAATATCATTGAACATTAACATAAGATGTATTTAAATGTATTAGAGCATAGAGCAAATAACCCTTCATGGGCGTTGAACATTAACATAAGATGTATTTAAATCTTGCATTATTATATTTATATCTGTAATAGTCCAAGTTGAACAATAACATGAGATGTATTTAAATATTAAATACTCGCTTTTTACCATATCTGTCATGCTAGTTGAATATTAACATAGGATGTATTTAAGCA

>NZ_CP006908|6|3|2217919-2218405|CRT
GTTGAACATTAACATGAGATGTATTTAAAT	CAATATTCACATTCTCTAATTGTTTTATATTTCCAT
GTTGAACAATAACATAGGATGTATTTAAAT	ATTGGCACGTAAGACGAATTCTGTGAAAAATGGG
GTTGAACAATAACATAGGATGTATTTAAAT	TACCATTACTTATATTTAAAGCTTTAGCTGCCTTTTT
GTTGAAGCTTAACATGAGATGTATTTAAAT	ACGATATCGGCACTGTATTTGATGGCGTAATATC
ATTGAACATTAACATAAGATGTATTTAAAT	GTATTAGAGCATAGAGCAAATAACCCTTCATGGGC
GTTGAACATTAACATAAGATGTATTTAAAT	CTTGCATTATTATATTTATATCTGTAATAGTCCAA
GTTGAACAATAACATGAGATGTATTTAAAT	ATTAAATACTCGCTTTTTACCATATCTGTCATGCTA
GTTGAATATTAACATAGGATGTATTTAAGC

>NZ_CP006908|6|5|2217920-2218406|CRISPRCasFinder
TTGAACATTAACATGAGATGTATTTAAAT	CAATATTCACATTCTCTAATTGTTTTATATTTCCATG
TTGAACAATAACATAGGATGTATTTAAAT	ATTGGCACGTAAGACGAATTCTGTGAAAAATGGGG
TTGAACAATAACATAGGATGTATTTAAAT	TACCATTACTTATATTTAAAGCTTTAGCTGCCTTTTTG
TTGAAGCTTAACATGAGATGTATTTAAAT	ACGATATCGGCACTGTATTTGATGGCGTAATATCA
TTGAACATTAACATAAGATGTATTTAAAT	GTATTAGAGCATAGAGCAAATAACCCTTCATGGGCG
TTGAACATTAACATAAGATGTATTTAAAT	CTTGCATTATTATATTTATATCTGTAATAGTCCAAG
TTGAACAATAACATGAGATGTATTTAAAT	ATTAAATACTCGCTTTTTACCATATCTGTCATGCTAG
TTGAATATTAACATAGGATGTATTTAAGCA

>NZ_CP006908|6|2|2218117-2218274|PILER-CR
TTGAAGCTTAACATGAGATGTATTTAAAT	ACGATATCGGCACTGTATTTGATGGCGTAATATCA
TTGAACATTAACATAAGATGTATTTAAAT	GTATTAGAGCATAGAGCAAATAACCCTTCATGGGCG
TTGAACATTAACATAAGATGTATTTAAAT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|273859
NZ_CP006908.1\|WP_003361931.1\|2220698_2221439_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP006908.1\|WP_012721052.1\|2221542_2222949_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|340904
NZ_CP006908.1\|WP_162266051.1\|2224733_2225126_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_012720909.1\|2213647_2213941_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_003361924.1\|2225163_2225652_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_003361943.1\|2209095_2210550_+\|hypothetical-protein	csx1	mkCas0085_csx1_CAS-III	unknown
NZ_CP006908.1\|WP_012721146.1\|2218972_2219494_-\|DUF4825-domain-containing-protein	unknown	unknown	gnl\|CDD\|379767
NZ_CP006908.1\|WP_003361932.1\|2219801_2220692_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP006908.1\|WP_012720962.1\|2223956_2224571_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP006908.1\|WP_003361940.1\|2212038_2213073_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP006908.1\|WP_012720905.1\|2213988_2214786_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP006908.1\|WP_012720660.1\|2214882_2216880_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239241
NZ_CP006908.1\|WP_033063258.1\|2223279_2223633_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379790
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|224255
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP006908.1\|WP_003361923.1\|2226308_2226902_+\|glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|172889
NZ_CP006908.1\|WP_003361929.1\|2223022_2223196_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238518

Protein	Function_ID	Function_description	E-value
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	8.45426e-42
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|273859	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents the region of stongest conservation, the N-terminal half, of one such family, represented by TM1795 from Thermotoga maritima. This protein is the first of a set of six genes, mostly from the RAMP superfamily, that we designated the CRISPR-associated RAMP module.	8.65634e-11
NZ_CP006908.1\|WP_003361931.1\|2220698_2221439_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.04663e-13
NZ_CP006908.1\|WP_012721052.1\|2221542_2222949_-\|peptide-MFS-transporter	gnl\|CDD\|340904	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters. The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.35095e-120
NZ_CP006908.1\|WP_012721146.1\|2218972_2219494_-\|DUF4825-domain-containing-protein	gnl\|CDD\|379767	pfam16107, DUF4825, Domain of unknown function (DUF4825). This domain forms the N-terminal, extracellular domain of some homologs of Staph BlaR1 proteases, where it replaces the penicillin-binding domain of BlaR1. It is also found in many uncharacterized proteins in a broad range of bacteria. Its association with BlaR1 homologs suggests it may be involved in substrate-, possibly antibiotic-binding, but this prediction has not been verified experimentally.	2.28795e-25
NZ_CP006908.1\|WP_003361932.1\|2219801_2220692_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	9.25706e-29
NZ_CP006908.1\|WP_012720962.1\|2223956_2224571_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	1.14834e-99
NZ_CP006908.1\|WP_003361940.1\|2212038_2213073_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	5.27946e-51
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.07531e-21
NZ_CP006908.1\|WP_012720905.1\|2213988_2214786_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.73877e-15
NZ_CP006908.1\|WP_012720660.1\|2214882_2216880_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|239241	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.	0
NZ_CP006908.1\|WP_033063258.1\|2223279_2223633_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	gnl\|CDD\|379790	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain.	9.44395e-11
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.08006e-62
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.25306e-31
NZ_CP006908.1\|WP_003361923.1\|2226308_2226902_+\|glycerol-3-phosphate-acyltransferase	gnl\|CDD\|172889	PRK14413, PRK14413, glycerol-3-phosphate acyltransferase.	9.58967e-96
NZ_CP006908.1\|WP_003361929.1\|2223022_2223196_-\|hypothetical-protein	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	2.13829e-09

>NZ_CP006908.1|WP_012720660.1|2214882_2216880_+|FAD-dependent-oxidoreductase
MKDKYKVLYDPIKIGKLEIKNRYVLAPMGPGGMCNADGSFNKRGIEFYVERAKGGTGLIMTGVTMVENNIEKCALPSMPCPTINPLNFITTGNEMTERVHAYGAKIFLQLSAGFGRVSIPSIVGKVAVAPSKIPHRFLPGVTCRELTTEEVKEYVKAFGDSAEIAKKAGFDGVEIHAVHEGYLLDQFAISFFNHRTDEYGGSLENRLRFACEVVQEIKKRCGQDFPVSLRYSIKSFIKDWCKGGLPDEEFEEKGRDIPEGIEAAKILVAAGYDALNGDVGSYDSWYWSHPPMYQKKGLYLPYNEILKKVVDVPIITAGRMEDPELSSDAILSGKTDMIALGRPLLADAEIPNKIFEDKYDKVRPCLSCQEGCMGRLQNFATVSCAVNPACGREKEYGLKKAEQIKKVLVVGGGVAGMEAARVAAIRGHKVTLIEKNGYLGGNIVPGGVPDFKDDDRALVKWYEGILKDLGVEIKLNVDASKENIKEFGADEVLLATGSSPRTLTIEGADKVYSAEDVLMERKNVGEKVIIIGGGLVGCETALWLKQQGKEVTIVEMQNDILQVGGPLCHANHDMLVDLIKFNKIDVKTSSYISKKTDEGFVLNTNGEESIINADSAVVAIGYLSEKDLYNQVRFDIPNARLIGDANKVQNIMYAIWSAYEVAKNI
>NZ_CP006908.1|WP_012720905.1|2213988_2214786_+|MerR-family-transcriptional-regulator
MRYSITDLAEILGCTTSAIHYFEKEHLIEVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEGREAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQLGVFDSRMGMSNFGYMVKTKKREELELPLGLHAKEIKSTSCIHTIVMADEDFTQQPQKVFKKASQFVIKKGLEIGEIAWGKILLVEVEKGAKLHPYIELWVSIKI
>NZ_CP006908.1|WP_012720909.1|2213647_2213941_+|hypothetical-protein
MNFFTLNILIGAMAFIINKINNMSQDIDPFEAFNDIEENLEEIDNEKVTNFVNGLINASMSNPSIGYFFMFLVYMTPILNLLLLIKGIVNYFNRAAG
>NZ_CP006908.1|WP_003361940.1|2212038_2213073_+|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MGSKQDECNLIYSLQRNIVRESGSKKERRYLGKIETNNEKIKCIREIQRLKPYYHQSIVKEYIKSIKKYCRELNFLVNEMEGITSYRLVVGLGNPSVTETSMTLHNIYGIPYIPGQALKGITRSYFLQKYFDIEKKEFGIIKINAAEFKAKELYKIIFGDDYYGEANEKGSIIFFDAFPVSDEIIIEKDVMTPHYSNYYGKGWNPTDEFSTNPIPFYTVKNTKFNFLFALIKEEIRMNEEKIIYAEDLKNFVSKLIKEALEEHGVGAKTSVGYGYFNDVKVIEDKKTKKRLSPNDIQLQLNQINKILDKNKKHEAIMNFYANNDVSKLGKEQKSQLAKYMKECL
>NZ_CP006908.1|WP_003361942.1|2210565_2211444_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFKGVNKILIKAITPVHAGVGRDLGLIDMPIQKEKHTGIPKIEGSTMKGSMRESYRLKKYKEKNNEDIVRKEVDKLFGPEDGHESAGIIGFTDAKLLFYPVITLDGIFAYVTCSYLLNRYFEDKALINNTEFNKKFKDLLEGECEILNNKCENVKNKIILDEYCFQETDKSSKVYEGLDLREFNLNSEKQVVVISDNDFIEIISLCREIVTRNKINPETGVVDKDTGSLFTEEYLPAESILYALVLQNGIQDKENLYDTYIENDLPNYAQIGGNATIGKGIVKITKLTESNN
>NZ_CP006908.1|WP_003361943.1|2209095_2210550_+|hypothetical-protein
MSRKVKFDSIAICSTLNQMVNYVVIKEHKLHSNNVYNIRLADENEKFNHEEWDDNLKEIIVRNYNWEDINYHNYEIKEHRNIIDKLIEKFGSDSSEFGSYPLKEEKILWNITGGQRHFVMAITEYVYNHRPEDVIVYFEGDKEKMYYYAKNKNIQQEDILRNKDYNMTIPIALRLMGFAVSKREFNKVSEYYNFLISNNANEFREKCKLQSISKINDKKPEDLYEQLESELKWYKKFYDIYCNSKTLRKLLINSNKFTTDSTGKTKFDMIKEDIKAYIKEIDNEIKSKTNTNVNVNDVFNGKGFDTLKKSIGNHLNGKVFGYILEHMTLYKVLDVIKSNKRLLENIADIDTSVKIKYETDKSKDKLGLIDEFDILIVTKKGKVVMLECKSGGMSSDNAKSHNYSIYAVAGVYGAPILVCPIKDGDVGKKETFDTKVIVSGKKACKENTDVYEHVRSAKYAADKAKLNIFYIDRIAEDIKKIIKR
>NZ_CP006908.1|WP_003361945.1|2207969_2209103_+|type-III-B-CRISPR-module-associated-protein-Cmr3
MNFDNIMQIKPNDNLFLGSGKNFSKGENTWLGTRMIPYPSVFYGAICSTMLVQNEDRRKKYIYNKDLDSDPRKYLSLGNVYLYNEEDDEVYMSAPLDLYLDEYEECHYAIIKKIKNNINCSEERMSHLFFNEIEGESQRVDDMFIKYRNFYNSYYNTNESIGIIKNSDIVTNSYKVGIERDKNYVAREKHLYRIDLTEFKKEKWSYLVEYNIKDSWWNEEIKNIKDGYLKLGGENKVCRFYTYDKNKKLMIYNNLYNQINDTEYVKMIITSPCIFEGNDYIPKFKNTEVIAASTGKPYDIGGFDMVLNIPKPMSKAVPEGSVYVLKNKDFNNTSLKEIRKIIDDEVLIDKTYKKQGFGMFELVPLDESQFEGEEIYE
>NZ_CP006908.1|WP_012720949.1|2206063_2207968_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MQQRIILFSIGSIQNFIINSRKVSDLFNSSKILSKLISNGMEFIKIRGNGELLLPQLLDKNEGLPNYFIMKYESNKHLGKELEEYIRRNYIDMLMNGSIKTSLEKYKNQIERQLDTSLDIYWVEYDLEESFDLNDSHKYAQVYYEIYKYFEAVKNVKKFNNIWEEGKKCSICGSRNAIVVSSNNKKDPFGIQKIYKYQDFTEDSLFKLIEILKNEDINLSLDEIKKVKKTACNNHLESKDIDIKLKDNEMLCSVCLLKRIYEGEKIPSLAQITLSSWIENEKKSLKCNAYNKYKETIDELNKIDCNFDVYEFMYKENWDKILKNIKIEDLEKKKKELNENFGNLNNINLPKYYCMYRMDIDNLGEWMSGKYKTSNKNLYEYQIDLSQRIYKFFNKLRENYFQENSKSILVYAGGDDLLALIPIDEIFKLEQNVRACFKEEVQVEEYKNITYSKGIFVAHYKTPLGEITRVSKEELEKVKEKFKEKANDFDKEKNATVISIMTEGYSNRNVYFKNNLNGEQTVEFIFEELVNYFNKDGSTYFHEQLQSEFWNLDRNIDKGYQRDILINMFEVEQKRLMKRSILKNSIAEEKIDEVNKKLINFLEVNSSKELKIDFENYFNLFHIIRSLKQNMEVK
>NZ_CP006908.1|WP_003361947.1|2205173_2206079_+|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MVEGNSKIYRLKNITDLCSNNGLNNGLKKPEFRLTEIKSLMRFWWRALNFYTNASTMKKEEENIFGNSDTYKSPIIFKTESNGFKYDDGSHEVRKNNKPINCFKSGKIVEIKLSVYKRKINQKEYINKELYFYDNLLKISLILGGIGKRSRRGCGVFMLEENDKECNLKNQIKSYMENLNVNKYYEFSKENDKYLELVRKDEYRNKKFKYPYIEEIIISKEAVSEEYFYIKIKESIDATRNEKFQYKDYKCEKLACPVYVTCYGDSNELYPIIVKLYNTNQHETYDNYYKKFKEVILCSKE
>NZ_CP006908.1|WP_003361948.1|2204422_2205112_+|CRISPR-associated-endoribonuclease-Cas6
MELWELIATVMLKKDIYFEDCGYIIGKNINKSMLLDKDLKEVHPKKQYKNYVFNSFYPIERDKFYKKDRLYIFNIRGLSKEFIDKIETCLCNLESNDFNVISTSKKEIKQRYIKELYTQTPLIITVDDKPWLQKDGDLDLFKQRLEDNLEKKYKSFFNEDIDVKDKFINSIEFKNRKPMHYNYKNGIKLLANKVSIQIEDNEEAQKVAFLARAVGLGEKNSAIGAGFCK
>NZ_CP006908.1|WP_012721146.1|2218972_2219494_-|DUF4825-domain-containing-protein
MKNKFRILVPLVLILSLNLIGCGVNYEKKSKENIKNSSKVETYDLIKYKGSYVGDNSSVGSIIKNLPANEYSAGFSLQTSKKPYEITVNYKANENLGEENYNKFWKDNKVEKLLEKNAAVLLSLIPNAEIIKFNVENIGKESYKYDRKNLDQKYGNLKNLFKDNDSLNKFLNN
>NZ_CP006908.1|WP_003361932.1|2219801_2220692_+|AraC-family-transcriptional-regulator
MNYRKDIENCIDYIEEHIKEPLTLKEITQEIGYSSYHFCRVFSFLKGMPLMEYVRKRKLSLSTIDLLEGKKIIDVALKWGFETPSSFARAFRKEFGCSPSQYIKKMKSYYKSENNLILSKFMNDPYIVKKHGFKVAGYGIKTNVADSKYTKDVASFWSNYNGENLESKLYKILSPLKHGEVGLCIPCSDSGDVTYLLGVIVEDFSKVTSDMITVEVPKAQYAVFTTNPVNTVESKDQREFAKIIKESWKYIFDEWFKNDDYEYDEEKLDFEFYDERCHLRPDTVMDIYVPIKKFER
>NZ_CP006908.1|WP_003361931.1|2220698_2221439_+|class-I-SAM-dependent-methyltransferase
MINYYGSLCTVMYELLHPHAPEDELQFYLQYAKKEMKILEPLCGSGRFLVPFLERGFNITGFDMSEEMLKELYKKAPKAKVFQSSIEEFSPKEKYDYIFITSGSFSLFLDRDIAFNVLEKMREALAPKGKFVFAAETTANIIPDREEYLKNCHVKTKEGYDIIFKSKSFYDKHKKILSTPSLYELYDGDKLLRKEEMDFRIKLYDFGELDKLILKAGFKGSYVFSDFKKSKPVDRNSETFLYECYI
>NZ_CP006908.1|WP_012721052.1|2221542_2222949_-|peptide-MFS-transporter
MSEKKQKHPIGLWLVNISIALQSYAAYAVVSILILFLTADVSKNGLGLSVPKAAAIIGLYQGINYMGSLVGGYITDKWLGIQKSLILGCFLTACGYLALFFAKPNIGSVWLGLIILIVAGAFFKAQISSLVGELYGKNELSKKDAAYSIFYMFINIGAFFGPIIAGLISDKWFAKVAADGEIAAYGYKYIFLMCTLIMIFIGIFIWIVSPKWLGEVGKYPVSKDKKNSTESVSTKSTEKAKAQPLTQLEKNRIKAMIVMFVFVIIFWSAWDQTATSFSLLANKLVNRTIGGFTMPVPWLTSINAIFCVVLSPIIANIWLKLGNSKKGDLSVPTKMGLGMILTGIAFLTLILGISTLGGVLDGSKQMNILFIIVAYFLLTVGELCLSPIGMAMFNKLAPAKYGSLAMGAWYLSFFFSSIISGKLAGFTDTLGYTQIFGLISGIVIVFGVILILLRNGLLKLMSLDELDK
>NZ_CP006908.1|WP_003361929.1|2223022_2223196_-|hypothetical-protein
MNIHEASTGFRWQYRPKEIHRFEEGIVITDEPEIYIAGSHGIRIENELIVCKGENNG
>NZ_CP006908.1|WP_033063258.1|2223279_2223633_-|aminopeptidase-P-family-N-terminal-domain-containing-protein
MYLFINKNKLSDEIKSSLKKNAALFIHPYNKIYKEVKKFTNSDVVLVHTDRMNYALYNNIDKEVITEISSSNKLDAFPAEQGRFIRPSFEPISSFGEHATIVTCILLMENSFMIVTV
>NZ_CP006908.1|WP_012720962.1|2223956_2224571_+|sugar-O-acetyltransferase
MNQKDRMLAGLPYKAWLDGLPEERMANKKKIYEYNHCLPDEHEKIHKLIRDILGKAGADVHIEAPFYCDYGKNIEVGDNFFANYNCIILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSRNSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGSVVTKDIPDNVIAIGNPCKVIREITEKDRKYYYKNYEFDVDDYKE
>NZ_CP006908.1|WP_162266051.1|2224733_2225126_+|hypothetical-protein
MESLPQYKDVIQKKEKKHLTVKIIAVFMFAIILAVVAYFSGAKSFSKAYIHVFTLFSVVNIYDMIVLDIGLFCHSKKTRIPGTEDMDKEYRSPWYWNYNRRCSSIIIWRNGSFHINNIVFKQGTQISDLV
>NZ_CP006908.1|WP_003361924.1|2225163_2225652_-|hypothetical-protein
MISKKILAFIAMTIMMISLLIGCSNNTMDKVYNDNSKIASVYDIFGLDKSDEIIESGIYKGKLKLSGSGTIWAYESSSDFDLKVPYILSVKSGKAKIVLISPDNTVVNLVENTDKATMKETTSLTLPIKKGNNRIKLVGYKKADIDIELHIEKGTFEKISFN
>NZ_CP006908.1|WP_003361923.1|2226308_2226902_+|glycerol-3-phosphate-acyltransferase
MIIIITSVISFLLGSIPTGYFITKKTCGIDIRTKGSGNIGSTNVKRIVGTKISIITQIIDVLKGIIPVVLGIYLSKIVKLPVSTNTYLSTIAIAAILGHDYTPFLKFKGGKGVNTTLGVFIFIAPIPTLTGLAVYFILGLFTSIVSIRSIAIGITIPIMCIITKLPIQIIISTTIAGILMVFRHKDNLVRIMRKEEK

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Crispr_ID: NZ_CP006908_7

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006908_7

2218658-2218753

TypeIII

III-B

Consensus_repeat	Method
TTGAACATTAACATAAGATGTATTTAAAT	CRISPRCasFinder

1 spacers

cmr6gr7,cmr4gr7,csx1,cmr3gr5,cas10,cmr1gr7,cas6

The CRISPR arrays of NZ_CP006908_7

>merge|NZ_CP006908|7|2218658-2218753|CRISPRCasFinder
TTGAACATTAACATGAGATGTATTTAAACGCTATTGTTATATCTCCATTAAACAATCGTAAAATAGGTTGAACATTAACATGAGATGTACTTAAGC

>NZ_CP006908|7|6|2218658-2218753|CRISPRCasFinder
TTGAACATTAACATGAGATGTATTTAAAC	GCTATTGTTATATCTCCATTAAACAATCGTAAAATAGG
TTGAACATTAACATGAGATGTACTTAAGC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	cmr3gr5	pfam09700_cmr3gr5_CAS-III-B	gnl\|CDD\|187879
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	cmr1gr7	COG1367_cmr1gr7_CAS-III-B	gnl\|CDD\|273859
NZ_CP006908.1\|WP_003361931.1\|2220698_2221439_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_CP006908.1\|WP_012721052.1\|2221542_2222949_-\|peptide-MFS-transporter	unknown	unknown	gnl\|CDD\|340904
NZ_CP006908.1\|WP_162266051.1\|2224733_2225126_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_012720909.1\|2213647_2213941_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_003361924.1\|2225163_2225652_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006908.1\|WP_003361943.1\|2209095_2210550_+\|hypothetical-protein	csx1	mkCas0085_csx1_CAS-III	unknown
NZ_CP006908.1\|WP_012721146.1\|2218972_2219494_-\|DUF4825-domain-containing-protein	unknown	unknown	gnl\|CDD\|379767
NZ_CP006908.1\|WP_003361932.1\|2219801_2220692_+\|AraC-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225117
NZ_CP006908.1\|WP_012720962.1\|2223956_2224571_+\|sugar-O-acetyltransferase	unknown	unknown	gnl\|CDD\|100047
NZ_CP006908.1\|WP_003361940.1\|2212038_2213073_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	cmr6gr7	cd09661_cmr6gr7_CAS-III-B	gnl\|CDD\|187792
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|273848
NZ_CP006908.1\|WP_012720905.1\|2213988_2214786_+\|MerR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|133378
NZ_CP006908.1\|WP_012720660.1\|2214882_2216880_+\|FAD-dependent-oxidoreductase	unknown	unknown	gnl\|CDD\|239241
NZ_CP006908.1\|WP_033063258.1\|2223279_2223633_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|379790
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	cmr4gr7	COG1336_cmr4gr7_CAS-III-C	gnl\|CDD\|224255
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	cas10	cd09679_cas10_CAS-III	gnl\|CDD\|187810
NZ_CP006908.1\|WP_003361923.1\|2226308_2226902_+\|glycerol-3-phosphate-acyltransferase	unknown	unknown	gnl\|CDD\|172889
NZ_CP006908.1\|WP_003361929.1\|2223022_2223196_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|238518

Protein	Function_ID	Function_description	E-value
NZ_CP006908.1\|WP_003361945.1\|2207969_2209103_+\|type-III-B-CRISPR-module-associated-protein-Cmr3	gnl\|CDD\|187879	cd09748, Cmr3_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr3. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	8.45426e-42
NZ_CP006908.1\|WP_003361947.1\|2205173_2206079_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr1	gnl\|CDD\|273859	TIGR01894, hypothetical_protein, CRISPR type III-B/RAMP module RAMP protein Cmr1. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents the region of stongest conservation, the N-terminal half, of one such family, represented by TM1795 from Thermotoga maritima. This protein is the first of a set of six genes, mostly from the RAMP superfamily, that we designated the CRISPR-associated RAMP module.	8.65634e-11
NZ_CP006908.1\|WP_003361931.1\|2220698_2221439_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	2.04663e-13
NZ_CP006908.1\|WP_012721052.1\|2221542_2222949_-\|peptide-MFS-transporter	gnl\|CDD\|340904	cd17346, MFS_DtpA_like, Dipeptide and tripeptide permease A (DtpA)-like subfamily of the Major Facilitator Superfamily of transporters. The DtpA-like subfamily includes four Escherichia coli proteins: dipeptide and tripeptide permeases A (DtpA, TppB or YdgR), B (DtpB or YhiP), C (DtpC or YjdL), and D (DtpD or YbgH). They are proton-dependent permeases that transport di- and tripeptides. DtpA and DtpB display a preference for di- and tripeptides composed of L-amino acids. DtpC shows higher specificity for dipeptides compared to tripeptides, and prefers dipeptides containing a C-terminal lysine residue. The DtpA-like subfamily belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.35095e-120
NZ_CP006908.1\|WP_012721146.1\|2218972_2219494_-\|DUF4825-domain-containing-protein	gnl\|CDD\|379767	pfam16107, DUF4825, Domain of unknown function (DUF4825). This domain forms the N-terminal, extracellular domain of some homologs of Staph BlaR1 proteases, where it replaces the penicillin-binding domain of BlaR1. It is also found in many uncharacterized proteins in a broad range of bacteria. Its association with BlaR1 homologs suggests it may be involved in substrate-, possibly antibiotic-binding, but this prediction has not been verified experimentally.	2.28795e-25
NZ_CP006908.1\|WP_003361932.1\|2219801_2220692_+\|AraC-family-transcriptional-regulator	gnl\|CDD\|225117	COG2207, AraC, AraC-type DNA-binding domain-containing proteins [Transcription].	9.25706e-29
NZ_CP006908.1\|WP_012720962.1\|2223956_2224571_+\|sugar-O-acetyltransferase	gnl\|CDD\|100047	cd03357, LbH_MAT_GAT, Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).	1.14834e-99
NZ_CP006908.1\|WP_003361940.1\|2212038_2213073_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr6	gnl\|CDD\|187792	cd09661, Cmr6_III-B, CRISPR/Cas system-associated RAMP superfamily protein Cmr6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; RAMP superfamily protein; This protein is a subunit of Cmr complex.	5.27946e-51
NZ_CP006908.1\|WP_003361948.1\|2204422_2205112_+\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|273848	TIGR01877, CRISPR-associated_endoribonuclease_Cas6_1, CRISPR-associated endoribonuclease Cas6. CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This broadly distributed, highly divergent Cas family is now characterized as an endoribonuclease that generates guide RNAs for host defense against phage and other invaders. The family contains a C-terminal motif GXGXXXXXGXG, where the each X between two Gly is hydrophobic and the spacer XXXXX contains (usually) one Arg or Lys. The seed alignment for the current version of this model has gappy columns removed. Members of this protein family are found associated with several different CRISPR/cas system subtypes, and consequently we designate this family Cas6.	5.07531e-21
NZ_CP006908.1\|WP_012720905.1\|2213988_2214786_+\|MerR-family-transcriptional-regulator	gnl\|CDD\|133378	cd00592, HTH_MerR-like, Helix-Turn-Helix DNA binding domain of MerR-like transcription regulators. Helix-turn-helix (HTH) MerR-like transcription regulator, N-terminal domain. The MerR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporter genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. A typical MerR regulator is comprised of two distinct domains that harbor the regulatory (effector-binding) site and the active (DNA-binding) site. Their N-terminal domains are homologous and contain a DNA-binding winged HTH motif, while the C-terminal domains are often dissimilar and bind specific coactivator molecules such as metal ions, drugs, and organic substrates.	5.73877e-15
NZ_CP006908.1\|WP_012720660.1\|2214882_2216880_+\|FAD-dependent-oxidoreductase	gnl\|CDD\|239241	cd02931, ER_like_FMN, Enoate reductase (ER)-like FMN-binding domain. Enoate reductase catalyzes the NADH-dependent reduction of carbon-carbon double bonds of several molecules, including nonactivated 2-enoates, alpha,beta-unsaturated aldehydes, cyclic ketones, and methylketones. ERs are similar to 2,4-dienoyl-CoA reductase from E. coli and to the old yellow enzyme from Saccharomyces cerevisiae.	0
NZ_CP006908.1\|WP_033063258.1\|2223279_2223633_-\|aminopeptidase-P-family-N-terminal-domain-containing-protein	gnl\|CDD\|379790	pfam16189, Creatinase_N_2, Creatinase/Prolidase N-terminal domain.	9.44395e-11
NZ_CP006908.1\|WP_003361942.1\|2210565_2211444_+\|type-III-B-CRISPR-module-RAMP-protein-Cmr4	gnl\|CDD\|224255	COG1336, COG1336, CRISPR system related protein, RAMP superfamily [Defense mechanisms].	2.08006e-62
NZ_CP006908.1\|WP_012720949.1\|2206063_2207968_+\|type-III-B-CRISPR-associated-protein-Cas10/Cmr2	gnl\|CDD\|187810	cd09679, Cas10_III, CRISPR/Cas system-associated protein Cas10. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Multidomain protein with permuted HD nuclease domain, palm domain and Zn-ribbon; MTH326-like has inactivated polymerase catalytic domain; alr1562 and slr7011 - predicted only on the basis of size, presence of HD domain, and location with RAMPs in one operon; signature gene for type III; also known as Crm2 family.	2.25306e-31
NZ_CP006908.1\|WP_003361923.1\|2226308_2226902_+\|glycerol-3-phosphate-acyltransferase	gnl\|CDD\|172889	PRK14413, PRK14413, glycerol-3-phosphate acyltransferase.	9.58967e-96
NZ_CP006908.1\|WP_003361929.1\|2223022_2223196_-\|hypothetical-protein	gnl\|CDD\|238518	cd01085, APP, X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.	2.13829e-09

>NZ_CP006908.1|WP_012720660.1|2214882_2216880_+|FAD-dependent-oxidoreductase
MKDKYKVLYDPIKIGKLEIKNRYVLAPMGPGGMCNADGSFNKRGIEFYVERAKGGTGLIMTGVTMVENNIEKCALPSMPCPTINPLNFITTGNEMTERVHAYGAKIFLQLSAGFGRVSIPSIVGKVAVAPSKIPHRFLPGVTCRELTTEEVKEYVKAFGDSAEIAKKAGFDGVEIHAVHEGYLLDQFAISFFNHRTDEYGGSLENRLRFACEVVQEIKKRCGQDFPVSLRYSIKSFIKDWCKGGLPDEEFEEKGRDIPEGIEAAKILVAAGYDALNGDVGSYDSWYWSHPPMYQKKGLYLPYNEILKKVVDVPIITAGRMEDPELSSDAILSGKTDMIALGRPLLADAEIPNKIFEDKYDKVRPCLSCQEGCMGRLQNFATVSCAVNPACGREKEYGLKKAEQIKKVLVVGGGVAGMEAARVAAIRGHKVTLIEKNGYLGGNIVPGGVPDFKDDDRALVKWYEGILKDLGVEIKLNVDASKENIKEFGADEVLLATGSSPRTLTIEGADKVYSAEDVLMERKNVGEKVIIIGGGLVGCETALWLKQQGKEVTIVEMQNDILQVGGPLCHANHDMLVDLIKFNKIDVKTSSYISKKTDEGFVLNTNGEESIINADSAVVAIGYLSEKDLYNQVRFDIPNARLIGDANKVQNIMYAIWSAYEVAKNI
>NZ_CP006908.1|WP_012720905.1|2213988_2214786_+|MerR-family-transcriptional-regulator
MRYSITDLAEILGCTTSAIHYFEKEHLIEVEKGKNGHRYYNVVDVFRLLSYTKYRSMEIPMKTIIAQFGGEENNYKLIEGREAMYQLEALKRAQYYMNLADAIGEHLVSIRRIEELLNKYEFAKSPEVTIMCDDECGWLSKKRSSQRIIHEWVKAMPTVQLGVFDSRMGMSNFGYMVKTKKREELELPLGLHAKEIKSTSCIHTIVMADEDFTQQPQKVFKKASQFVIKKGLEIGEIAWGKILLVEVEKGAKLHPYIELWVSIKI
>NZ_CP006908.1|WP_012720909.1|2213647_2213941_+|hypothetical-protein
MNFFTLNILIGAMAFIINKINNMSQDIDPFEAFNDIEENLEEIDNEKVTNFVNGLINASMSNPSIGYFFMFLVYMTPILNLLLLIKGIVNYFNRAAG
>NZ_CP006908.1|WP_003361940.1|2212038_2213073_+|type-III-B-CRISPR-module-RAMP-protein-Cmr6
MGSKQDECNLIYSLQRNIVRESGSKKERRYLGKIETNNEKIKCIREIQRLKPYYHQSIVKEYIKSIKKYCRELNFLVNEMEGITSYRLVVGLGNPSVTETSMTLHNIYGIPYIPGQALKGITRSYFLQKYFDIEKKEFGIIKINAAEFKAKELYKIIFGDDYYGEANEKGSIIFFDAFPVSDEIIIEKDVMTPHYSNYYGKGWNPTDEFSTNPIPFYTVKNTKFNFLFALIKEEIRMNEEKIIYAEDLKNFVSKLIKEALEEHGVGAKTSVGYGYFNDVKVIEDKKTKKRLSPNDIQLQLNQINKILDKNKKHEAIMNFYANNDVSKLGKEQKSQLAKYMKECL
>NZ_CP006908.1|WP_003361942.1|2210565_2211444_+|type-III-B-CRISPR-module-RAMP-protein-Cmr4
MFKGVNKILIKAITPVHAGVGRDLGLIDMPIQKEKHTGIPKIEGSTMKGSMRESYRLKKYKEKNNEDIVRKEVDKLFGPEDGHESAGIIGFTDAKLLFYPVITLDGIFAYVTCSYLLNRYFEDKALINNTEFNKKFKDLLEGECEILNNKCENVKNKIILDEYCFQETDKSSKVYEGLDLREFNLNSEKQVVVISDNDFIEIISLCREIVTRNKINPETGVVDKDTGSLFTEEYLPAESILYALVLQNGIQDKENLYDTYIENDLPNYAQIGGNATIGKGIVKITKLTESNN
>NZ_CP006908.1|WP_003361943.1|2209095_2210550_+|hypothetical-protein
MSRKVKFDSIAICSTLNQMVNYVVIKEHKLHSNNVYNIRLADENEKFNHEEWDDNLKEIIVRNYNWEDINYHNYEIKEHRNIIDKLIEKFGSDSSEFGSYPLKEEKILWNITGGQRHFVMAITEYVYNHRPEDVIVYFEGDKEKMYYYAKNKNIQQEDILRNKDYNMTIPIALRLMGFAVSKREFNKVSEYYNFLISNNANEFREKCKLQSISKINDKKPEDLYEQLESELKWYKKFYDIYCNSKTLRKLLINSNKFTTDSTGKTKFDMIKEDIKAYIKEIDNEIKSKTNTNVNVNDVFNGKGFDTLKKSIGNHLNGKVFGYILEHMTLYKVLDVIKSNKRLLENIADIDTSVKIKYETDKSKDKLGLIDEFDILIVTKKGKVVMLECKSGGMSSDNAKSHNYSIYAVAGVYGAPILVCPIKDGDVGKKETFDTKVIVSGKKACKENTDVYEHVRSAKYAADKAKLNIFYIDRIAEDIKKIIKR
>NZ_CP006908.1|WP_003361945.1|2207969_2209103_+|type-III-B-CRISPR-module-associated-protein-Cmr3
MNFDNIMQIKPNDNLFLGSGKNFSKGENTWLGTRMIPYPSVFYGAICSTMLVQNEDRRKKYIYNKDLDSDPRKYLSLGNVYLYNEEDDEVYMSAPLDLYLDEYEECHYAIIKKIKNNINCSEERMSHLFFNEIEGESQRVDDMFIKYRNFYNSYYNTNESIGIIKNSDIVTNSYKVGIERDKNYVAREKHLYRIDLTEFKKEKWSYLVEYNIKDSWWNEEIKNIKDGYLKLGGENKVCRFYTYDKNKKLMIYNNLYNQINDTEYVKMIITSPCIFEGNDYIPKFKNTEVIAASTGKPYDIGGFDMVLNIPKPMSKAVPEGSVYVLKNKDFNNTSLKEIRKIIDDEVLIDKTYKKQGFGMFELVPLDESQFEGEEIYE
>NZ_CP006908.1|WP_012720949.1|2206063_2207968_+|type-III-B-CRISPR-associated-protein-Cas10/Cmr2
MQQRIILFSIGSIQNFIINSRKVSDLFNSSKILSKLISNGMEFIKIRGNGELLLPQLLDKNEGLPNYFIMKYESNKHLGKELEEYIRRNYIDMLMNGSIKTSLEKYKNQIERQLDTSLDIYWVEYDLEESFDLNDSHKYAQVYYEIYKYFEAVKNVKKFNNIWEEGKKCSICGSRNAIVVSSNNKKDPFGIQKIYKYQDFTEDSLFKLIEILKNEDINLSLDEIKKVKKTACNNHLESKDIDIKLKDNEMLCSVCLLKRIYEGEKIPSLAQITLSSWIENEKKSLKCNAYNKYKETIDELNKIDCNFDVYEFMYKENWDKILKNIKIEDLEKKKKELNENFGNLNNINLPKYYCMYRMDIDNLGEWMSGKYKTSNKNLYEYQIDLSQRIYKFFNKLRENYFQENSKSILVYAGGDDLLALIPIDEIFKLEQNVRACFKEEVQVEEYKNITYSKGIFVAHYKTPLGEITRVSKEELEKVKEKFKEKANDFDKEKNATVISIMTEGYSNRNVYFKNNLNGEQTVEFIFEELVNYFNKDGSTYFHEQLQSEFWNLDRNIDKGYQRDILINMFEVEQKRLMKRSILKNSIAEEKIDEVNKKLINFLEVNSSKELKIDFENYFNLFHIIRSLKQNMEVK
>NZ_CP006908.1|WP_003361947.1|2205173_2206079_+|type-III-B-CRISPR-module-RAMP-protein-Cmr1
MVEGNSKIYRLKNITDLCSNNGLNNGLKKPEFRLTEIKSLMRFWWRALNFYTNASTMKKEEENIFGNSDTYKSPIIFKTESNGFKYDDGSHEVRKNNKPINCFKSGKIVEIKLSVYKRKINQKEYINKELYFYDNLLKISLILGGIGKRSRRGCGVFMLEENDKECNLKNQIKSYMENLNVNKYYEFSKENDKYLELVRKDEYRNKKFKYPYIEEIIISKEAVSEEYFYIKIKESIDATRNEKFQYKDYKCEKLACPVYVTCYGDSNELYPIIVKLYNTNQHETYDNYYKKFKEVILCSKE
>NZ_CP006908.1|WP_003361948.1|2204422_2205112_+|CRISPR-associated-endoribonuclease-Cas6
MELWELIATVMLKKDIYFEDCGYIIGKNINKSMLLDKDLKEVHPKKQYKNYVFNSFYPIERDKFYKKDRLYIFNIRGLSKEFIDKIETCLCNLESNDFNVISTSKKEIKQRYIKELYTQTPLIITVDDKPWLQKDGDLDLFKQRLEDNLEKKYKSFFNEDIDVKDKFINSIEFKNRKPMHYNYKNGIKLLANKVSIQIEDNEEAQKVAFLARAVGLGEKNSAIGAGFCK
>NZ_CP006908.1|WP_012721146.1|2218972_2219494_-|DUF4825-domain-containing-protein
MKNKFRILVPLVLILSLNLIGCGVNYEKKSKENIKNSSKVETYDLIKYKGSYVGDNSSVGSIIKNLPANEYSAGFSLQTSKKPYEITVNYKANENLGEENYNKFWKDNKVEKLLEKNAAVLLSLIPNAEIIKFNVENIGKESYKYDRKNLDQKYGNLKNLFKDNDSLNKFLNN
>NZ_CP006908.1|WP_003361932.1|2219801_2220692_+|AraC-family-transcriptional-regulator
MNYRKDIENCIDYIEEHIKEPLTLKEITQEIGYSSYHFCRVFSFLKGMPLMEYVRKRKLSLSTIDLLEGKKIIDVALKWGFETPSSFARAFRKEFGCSPSQYIKKMKSYYKSENNLILSKFMNDPYIVKKHGFKVAGYGIKTNVADSKYTKDVASFWSNYNGENLESKLYKILSPLKHGEVGLCIPCSDSGDVTYLLGVIVEDFSKVTSDMITVEVPKAQYAVFTTNPVNTVESKDQREFAKIIKESWKYIFDEWFKNDDYEYDEEKLDFEFYDERCHLRPDTVMDIYVPIKKFER
>NZ_CP006908.1|WP_003361931.1|2220698_2221439_+|class-I-SAM-dependent-methyltransferase
MINYYGSLCTVMYELLHPHAPEDELQFYLQYAKKEMKILEPLCGSGRFLVPFLERGFNITGFDMSEEMLKELYKKAPKAKVFQSSIEEFSPKEKYDYIFITSGSFSLFLDRDIAFNVLEKMREALAPKGKFVFAAETTANIIPDREEYLKNCHVKTKEGYDIIFKSKSFYDKHKKILSTPSLYELYDGDKLLRKEEMDFRIKLYDFGELDKLILKAGFKGSYVFSDFKKSKPVDRNSETFLYECYI
>NZ_CP006908.1|WP_012721052.1|2221542_2222949_-|peptide-MFS-transporter
MSEKKQKHPIGLWLVNISIALQSYAAYAVVSILILFLTADVSKNGLGLSVPKAAAIIGLYQGINYMGSLVGGYITDKWLGIQKSLILGCFLTACGYLALFFAKPNIGSVWLGLIILIVAGAFFKAQISSLVGELYGKNELSKKDAAYSIFYMFINIGAFFGPIIAGLISDKWFAKVAADGEIAAYGYKYIFLMCTLIMIFIGIFIWIVSPKWLGEVGKYPVSKDKKNSTESVSTKSTEKAKAQPLTQLEKNRIKAMIVMFVFVIIFWSAWDQTATSFSLLANKLVNRTIGGFTMPVPWLTSINAIFCVVLSPIIANIWLKLGNSKKGDLSVPTKMGLGMILTGIAFLTLILGISTLGGVLDGSKQMNILFIIVAYFLLTVGELCLSPIGMAMFNKLAPAKYGSLAMGAWYLSFFFSSIISGKLAGFTDTLGYTQIFGLISGIVIVFGVILILLRNGLLKLMSLDELDK
>NZ_CP006908.1|WP_003361929.1|2223022_2223196_-|hypothetical-protein
MNIHEASTGFRWQYRPKEIHRFEEGIVITDEPEIYIAGSHGIRIENELIVCKGENNG
>NZ_CP006908.1|WP_033063258.1|2223279_2223633_-|aminopeptidase-P-family-N-terminal-domain-containing-protein
MYLFINKNKLSDEIKSSLKKNAALFIHPYNKIYKEVKKFTNSDVVLVHTDRMNYALYNNIDKEVITEISSSNKLDAFPAEQGRFIRPSFEPISSFGEHATIVTCILLMENSFMIVTV
>NZ_CP006908.1|WP_012720962.1|2223956_2224571_+|sugar-O-acetyltransferase
MNQKDRMLAGLPYKAWLDGLPEERMANKKKIYEYNHCLPDEHEKIHKLIRDILGKAGADVHIEAPFYCDYGKNIEVGDNFFANYNCIILDVGKVIIGNNVQFAPNVSLYTAGHPIHPDSRNSGYEYGIGITIGDNVWLGGNVVVNPGVHIGNNVVIGSGSVVTKDIPDNVIAIGNPCKVIREITEKDRKYYYKNYEFDVDDYKE
>NZ_CP006908.1|WP_162266051.1|2224733_2225126_+|hypothetical-protein
MESLPQYKDVIQKKEKKHLTVKIIAVFMFAIILAVVAYFSGAKSFSKAYIHVFTLFSVVNIYDMIVLDIGLFCHSKKTRIPGTEDMDKEYRSPWYWNYNRRCSSIIIWRNGSFHINNIVFKQGTQISDLV
>NZ_CP006908.1|WP_003361924.1|2225163_2225652_-|hypothetical-protein
MISKKILAFIAMTIMMISLLIGCSNNTMDKVYNDNSKIASVYDIFGLDKSDEIIESGIYKGKLKLSGSGTIWAYESSSDFDLKVPYILSVKSGKAKIVLISPDNTVVNLVENTDKATMKETTSLTLPIKKGNNRIKLVGYKKADIDIELHIEKGTFEKISFN
>NZ_CP006908.1|WP_003361923.1|2226308_2226902_+|glycerol-3-phosphate-acyltransferase
MIIIITSVISFLLGSIPTGYFITKKTCGIDIRTKGSGNIGSTNVKRIVGTKISIITQIIDVLKGIIPVVLGIYLSKIVKLPVSTNTYLSTIAIAAILGHDYTPFLKFKGGKGVNTTLGVFIFIAPIPTLTGLAVYFILGLFTSIVSIRSIAIGITIPIMCIITKLPIQIIISTTIAGILMVFRHKDNLVRIMRKEEK

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP006908_1	1.3\|1693324\|30\|NZ_CP006908\|CRT	1693324-1693353	30	NZ_CP006908.1	1693216-1693245	2	0.933

1. spacer 1.3|1693324|30|NZ_CP006908|CRT matches to position: 1693216-1693245, mismatch: 2, identity: 0.933

taaggatccaggaacagacacaggtaagga	CRISPR spacer
taagaatccaggaaaagacacaggtaagga	Protospacer
****.********* ***************

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP006908_3	3.1\|2198780\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2198780-2198815	36	NZ_CP031100	Clostridium botulinum strain CFSAN034202 plasmid p1_CFSAN034202, complete sequence	46203-46238	0	1.0
NZ_CP006908_3	3.1\|2198780\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2198780-2198815	36	NZ_CP014218	Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence	44320-44355	0	1.0
NZ_CP006908_3	3.1\|2198780\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2198780-2198815	36	NZ_CP014147	Clostridium botulinum strain CDC_67190 plasmid pNPD12_2, complete sequence	48629-48664	0	1.0
NZ_CP006908_3	3.1\|2198780\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2198780-2198815	36	NZ_CP014173	Clostridium botulinum strain B609 plasmid pRSJ22_2, complete sequence	6782-6817	0	1.0
NZ_CP006908_3	3.4\|2198975\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2198975-2199010	36	NZ_CP013848	Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence	35434-35469	0	1.0
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	213744-213779	1	0.972
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	225594-225629	1	0.972
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NC_012654	Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence	169040-169075	1	0.972
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	68343-68378	1	0.972
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	210528-210563	1	0.972
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	188898-188933	1	0.972
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NZ_CP031095	Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence	213108-213143	1	0.972
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	37501-37536	2	0.944
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	773-808	2	0.944
NZ_CP006908_3	3.3\|2198911\|34\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2198911-2198944	34	NZ_CP013848	Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence	28507-28540	4	0.882
NZ_CP006908_1	1.1\|1693240\|30\|NZ_CP006908\|CRT	1693240-1693269	30	GQ478082	Enterococcus phage phiFL1B, complete genome	37445-37474	5	0.833
NZ_CP006908_1	1.1\|1693240\|30\|NZ_CP006908\|CRT	1693240-1693269	30	GQ478087	Enterococcus phage phiFL3B, complete genome	38732-38761	5	0.833
NZ_CP006908_1	1.1\|1693240\|30\|NZ_CP006908\|CRT	1693240-1693269	30	GQ478083	Enterococcus phage phiFL1C, complete genome	37176-37205	5	0.833
NZ_CP006908_1	1.1\|1693240\|30\|NZ_CP006908\|CRT	1693240-1693269	30	GQ478085	Enterococcus phage phiFL2B, complete genome	35283-35312	5	0.833
NZ_CP006908_1	1.1\|1693240\|30\|NZ_CP006908\|CRT	1693240-1693269	30	NC_013646	Enterococcus phage phiFL1A, complete genome	37221-37250	5	0.833
NZ_CP006908_1	1.1\|1693240\|30\|NZ_CP006908\|CRT	1693240-1693269	30	NC_013648	Enterococcus phage phiFL3A, complete genome	38033-38062	5	0.833
NZ_CP006908_1	1.1\|1693240\|30\|NZ_CP006908\|CRT	1693240-1693269	30	NC_013643	Enterococcus phage phiFL2A, complete genome	34724-34753	5	0.833
NZ_CP006908_3	3.7\|2199173\|35\|NZ_CP006908\|CRT	2199173-2199207	35	NC_018878	Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence	455251-455285	6	0.829
NZ_CP006908_3	3.4\|2198975\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2198975-2199010	36	NC_013518	Sebaldella termitidis ATCC 33386 plasmid pSTERM01, complete sequence	9720-9755	7	0.806
NZ_CP006908_3	3.4\|2198975\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2198975-2199010	36	MN018232	Synechococcus phage S-B43, complete genome	200689-200724	7	0.806
NZ_CP006908_3	3.5\|2199041\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2199041-2199076	36	MH622943	Myoviridae sp. isolate ctbc_4, complete genome	251748-251783	8	0.778
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	98610-98645	9	0.75
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	121549-121584	9	0.75
NZ_CP006908_6	6.6\|2218275\|35\|NZ_CP006908\|CRT	2218275-2218309	35	MT774397	CrAssphage cr56_1, complete genome	79142-79176	9	0.743
NZ_CP006908_2	2.2\|2198433\|35\|NZ_CP006908\|CRISPRCasFinder	2198433-2198467	35	AP014446	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C43-MedDCM-OCT-S31-C62, * SEQUENCING IN PROGRESS *, 3 ordered pieces	11123-11157	10	0.714
NZ_CP006908_2	2.2\|2198433\|35\|NZ_CP006908\|CRISPRCasFinder	2198433-2198467	35	NC_018855	Enterobacteria phage HX01, complete genome	88045-88079	10	0.714
NZ_CP006908_2	2.2\|2198433\|35\|NZ_CP006908\|CRISPRCasFinder	2198433-2198467	35	KR422352	Escherichia phage APCEc01, complete genome	167720-167754	10	0.714
NZ_CP006908_3	3.5\|2199041\|36\|NZ_CP006908\|PILER-CR,CRISPRCasFinder,CRT	2199041-2199076	36	NZ_CP013041	Clostridium perfringens strain JP55 plasmid pJFP55F, complete sequence	14400-14435	10	0.722
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	MK250029	Prevotella phage Lak-C1, complete genome	206070-206105	10	0.722
NZ_CP006908_5	5.2\|2217574\|36\|NZ_CP006908\|CRISPRCasFinder	2217574-2217609	36	MK250019	Prevotella phage Lak-A2, complete genome	164898-164933	10	0.722
NZ_CP006908_2	2.2\|2198433\|35\|NZ_CP006908\|CRISPRCasFinder	2198433-2198467	35	AP013442	Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C22-MedDCM-OCT-S36-C18	6041-6075	11	0.686

1. spacer 3.1|2198780|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP031100 (Clostridium botulinum strain CFSAN034202 plasmid p1_CFSAN034202, complete sequence) position: , mismatch: 0, identity: 1.0

gttaatgtattttgcattatatttgcattattaata	CRISPR spacer
gttaatgtattttgcattatatttgcattattaata	Protospacer
************************************

2. spacer 3.1|2198780|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014218 (Clostridium botulinum strain B515 plasmid pRSJ21_3, complete sequence) position: , mismatch: 0, identity: 1.0

gttaatgtattttgcattatatttgcattattaata	CRISPR spacer
gttaatgtattttgcattatatttgcattattaata	Protospacer
************************************

3. spacer 3.1|2198780|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014147 (Clostridium botulinum strain CDC_67190 plasmid pNPD12_2, complete sequence) position: , mismatch: 0, identity: 1.0

gttaatgtattttgcattatatttgcattattaata	CRISPR spacer
gttaatgtattttgcattatatttgcattattaata	Protospacer
************************************

4. spacer 3.1|2198780|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP014173 (Clostridium botulinum strain B609 plasmid pRSJ22_2, complete sequence) position: , mismatch: 0, identity: 1.0

gttaatgtattttgcattatatttgcattattaata	CRISPR spacer
gttaatgtattttgcattatatttgcattattaata	Protospacer
************************************

5. spacer 3.4|2198975|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013848 (Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence) position: , mismatch: 0, identity: 1.0

aagtaaaaagattaataaaaaaaagagaagaatagt	CRISPR spacer
aagtaaaaagattaataaaaaaaagagaagaatagt	Protospacer
************************************

6. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 1, identity: 0.972

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaagtatctagttttttatttatt	Protospacer
***********************************

7. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 1, identity: 0.972

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaagtatctagttttttatttatt	Protospacer
***********************************

8. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NC_012654 (Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequence) position: , mismatch: 1, identity: 0.972

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaagtatctagttttttatttatt	Protospacer
***********************************

9. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 1, identity: 0.972

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaagtatctagttttttatttatt	Protospacer
***********************************

10. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.972

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaagtatctagttttttatttatt	Protospacer
***********************************

11. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.972

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaagtatctagttttttatttatt	Protospacer
***********************************

12. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NZ_CP031095 (Clostridium botulinum strain CFSAN034200 plasmid p1_CDC51232, complete sequence) position: , mismatch: 1, identity: 0.972

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaagtatctagttttttatttatt	Protospacer
***********************************

13. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 2, identity: 0.944

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaactatctagttttttatttatt	Protospacer
*************** *******************

14. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 2, identity: 0.944

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
ttgctttttataaaactatctagttttttatttatt	Protospacer
*************** *******************

15. spacer 3.3|2198911|34|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013848 (Clostridium botulinum strain Af650 plasmid pRSJ14_1, complete sequence) position: , mismatch: 4, identity: 0.882

gtgttaggatcatatgcacctataatttcttctt	CRISPR spacer
gtattagggtcatatgcacctataatttctttct	Protospacer
**.*****.**********************..*

16. spacer 1.1|1693240|30|NZ_CP006908|CRT matches to GQ478082 (Enterococcus phage phiFL1B, complete genome) position: , mismatch: 5, identity: 0.833

taaggac---ccaggaacagatacaggtaaaga	CRISPR spacer
---ggacacaccagcaacagatgcaggtaaaga	Protospacer
   ****   **** *******.**********

17. spacer 1.1|1693240|30|NZ_CP006908|CRT matches to GQ478087 (Enterococcus phage phiFL3B, complete genome) position: , mismatch: 5, identity: 0.833

taaggac---ccaggaacagatacaggtaaaga	CRISPR spacer
---ggacacaccagcaacagatgcaggtaaaga	Protospacer
   ****   **** *******.**********

18. spacer 1.1|1693240|30|NZ_CP006908|CRT matches to GQ478083 (Enterococcus phage phiFL1C, complete genome) position: , mismatch: 5, identity: 0.833

taaggac---ccaggaacagatacaggtaaaga	CRISPR spacer
---ggacacaccagcaacagatgcaggtaaaga	Protospacer
   ****   **** *******.**********

19. spacer 1.1|1693240|30|NZ_CP006908|CRT matches to GQ478085 (Enterococcus phage phiFL2B, complete genome) position: , mismatch: 5, identity: 0.833

taaggac---ccaggaacagatacaggtaaaga	CRISPR spacer
---ggacacaccagcaacagatgcaggtaaaga	Protospacer
   ****   **** *******.**********

20. spacer 1.1|1693240|30|NZ_CP006908|CRT matches to NC_013646 (Enterococcus phage phiFL1A, complete genome) position: , mismatch: 5, identity: 0.833

taaggac---ccaggaacagatacaggtaaaga	CRISPR spacer
---ggacacaccagcaacagatgcaggtaaaga	Protospacer
   ****   **** *******.**********

21. spacer 1.1|1693240|30|NZ_CP006908|CRT matches to NC_013648 (Enterococcus phage phiFL3A, complete genome) position: , mismatch: 5, identity: 0.833

taaggac---ccaggaacagatacaggtaaaga	CRISPR spacer
---ggacacaccagcaacagatgcaggtaaaga	Protospacer
   ****   **** *******.**********

22. spacer 1.1|1693240|30|NZ_CP006908|CRT matches to NC_013643 (Enterococcus phage phiFL2A, complete genome) position: , mismatch: 5, identity: 0.833

taaggac---ccaggaacagatacaggtaaaga	CRISPR spacer
---ggacacaccagcaacagatgcaggtaaaga	Protospacer
   ****   **** *******.**********

23. spacer 3.7|2199173|35|NZ_CP006908|CRT matches to NC_018878 (Bacillus thuringiensis Bt407 plasmid BTB_502p, complete sequence) position: , mismatch: 6, identity: 0.829

actat-tctcctcttgtagcgggagttcctatacct	CRISPR spacer
-caataccgcctcttgtagcgggcgttccaatacct	Protospacer
 * ** .* ************** ***** ******

24. spacer 3.4|2198975|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to NC_013518 (Sebaldella termitidis ATCC 33386 plasmid pSTERM01, complete sequence) position: , mismatch: 7, identity: 0.806

aagtaaaaagattaataaaaaaaagagaagaatagt	CRISPR spacer
aagaaaaaagatttataaaaaaaagagaagcggttt	Protospacer
*** ********* **************** .   *

25. spacer 3.4|2198975|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to MN018232 (Synechococcus phage S-B43, complete genome) position: , mismatch: 7, identity: 0.806

aagtaaaaagattaataaaaaaaagagaagaatagt	CRISPR spacer
atacaaaaagagtaataaaaaaatgagaagaataaa	Protospacer
* ..******* *********** **********.

26. spacer 3.5|2199041|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to MH622943 (Myoviridae sp. isolate ctbc_4, complete genome) position: , mismatch: 8, identity: 0.778

tctttaatcttattaaatattttttctgtttcttcc	CRISPR spacer
tctttaatcttattaataattttttcttcgttatca	Protospacer
****************  ********* . *. **

27. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 9, identity: 0.75

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
acactaggtataaaagtatctagtgttttttttatg	Protospacer
 ..**   **************** **** *****.

28. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 9, identity: 0.75

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
acactaggtataaaagtatctagtgttttttttatg	Protospacer
 ..**   **************** **** *****.

29. spacer 6.6|2218275|35|NZ_CP006908|CRT matches to MT774397 (CrAssphage cr56_1, complete genome) position: , mismatch: 9, identity: 0.743

cttgcattattatatttatatctgta---atagtccaa	CRISPR spacer
tttgcattattatattttcatctgtacgtatgagc---	Protospacer
.**************** .*******   **.. *

30. spacer 2.2|2198433|35|NZ_CP006908|CRISPRCasFinder matches to AP014446 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C43-MedDCM-OCT-S31-C62, *** SEQUENCING IN PROGRESS ***, 3 ordered pieces) position: , mismatch: 10, identity: 0.714

taaaaaaatgaaaaatatgaagcatatttagtatt	CRISPR spacer
agataaaatgaaaaatattaaacatattttaattg	Protospacer
 .* ************** **.******* .  *

31. spacer 2.2|2198433|35|NZ_CP006908|CRISPRCasFinder matches to NC_018855 (Enterobacteria phage HX01, complete genome) position: , mismatch: 10, identity: 0.714

taaaaaaatgaaaaatatgaagcatatttagtatt	CRISPR spacer
ttccgaaatgaaaaatatgaggcatctttaccgtg	Protospacer
*   .***************.**** **** ..*

32. spacer 2.2|2198433|35|NZ_CP006908|CRISPRCasFinder matches to KR422352 (Escherichia phage APCEc01, complete genome) position: , mismatch: 10, identity: 0.714

taaaaaaatgaaaaatatgaagcatatttagtatt	CRISPR spacer
ttccgaaatgaaaaatatgaggcatctttaccgtg	Protospacer
*   .***************.**** **** ..*

33. spacer 3.5|2199041|36|NZ_CP006908|PILER-CR,CRISPRCasFinder,CRT matches to NZ_CP013041 (Clostridium perfringens strain JP55 plasmid pJFP55F, complete sequence) position: , mismatch: 10, identity: 0.722

tctttaatcttattaaatattttttctgtttcttcc	CRISPR spacer
ttcttattcttattaaatattttttcagttaaagat	Protospacer
*..*** ******************* ***     .

34. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to MK250029 (Prevotella phage Lak-C1, complete genome) position: , mismatch: 10, identity: 0.722

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
aaatcttttttaaaagtatctacttttttatgttca	Protospacer
  ...**** ************ ******** * .*

35. spacer 5.2|2217574|36|NZ_CP006908|CRISPRCasFinder matches to MK250019 (Prevotella phage Lak-A2, complete genome) position: , mismatch: 10, identity: 0.722

ttgctttttataaaagtatctagttttttatttata	CRISPR spacer
aaatcttttttaaaagtatctacttttttatgttca	Protospacer
  ...**** ************ ******** * .*

36. spacer 2.2|2198433|35|NZ_CP006908|CRISPRCasFinder matches to AP013442 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G17, isolate: uvMED-CGR-C22-MedDCM-OCT-S36-C18) position: , mismatch: 11, identity: 0.686

taaaaaaatgaaaaatatgaagcatatttagtatt	CRISPR spacer
acaaaaaatgaaagatatgaaccatatggtagagc	Protospacer
  ***********.******* *****   . * .

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1079252 : 1101294

Clostridium_phage(85.71%)

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003360074.1\|1079252_1080740_-	MBOAT family protein	A0A125RNP0	Pseudomonas_phage	2.8e-65	37.8
WP_003357837.1\|1081839_1081989_-	hypothetical protein	NA	NA	NA	NA
WP_003360073.1\|1082290_1082701_-	helix-turn-helix domain-containing protein	A0A0A7RUJ5	Clostridium_phage	1.0e-09	56.2
WP_003360072.1\|1082891_1083101_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003360071.1\|1083162_1083375_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_012721136.1\|1083468_1084374_+	phage replisome organizer N-terminal domain-containing protein	A8ASN4	Listeria_phage	5.5e-40	38.9
WP_003360069.1\|1084363_1085164_+	ATP-binding protein	A0A2K9V3L7	Faecalibacterium_phage	9.9e-33	34.8
WP_003360068.1\|1085220_1085541_+	hypothetical protein	NA	NA	NA	NA
WP_003358043.1\|1085654_1086176_+	hypothetical protein	A0A0A7RVS1	Clostridium_phage	3.6e-36	50.6
WP_003360066.1\|1086862_1087147_+	hypothetical protein	A0A0A7S0R4	Clostridium_phage	1.0e-24	60.2
WP_003360065.1\|1087146_1087512_+	hypothetical protein	A0A0A7RW73	Clostridium_phage	8.5e-32	55.4
WP_003360064.1\|1087516_1087864_+	hypothetical protein	A0A0A7RU51	Clostridium_phage	7.3e-33	59.6
WP_003360063.1\|1087869_1088289_+	hypothetical protein	A0A0A7RU17	Clostridium_phage	7.9e-58	72.7
WP_003360062.1\|1088293_1089181_+	hypothetical protein	A0A0A7RTZ9	Clostridium_phage	2.4e-120	75.1
WP_003357967.1\|1089195_1089612_+	hypothetical protein	A0A0A7S0S0	Clostridium_phage	9.0e-46	71.2
WP_003357826.1\|1089646_1089814_+	hypothetical protein	A0A0A7RW80	Clostridium_phage	1.9e-15	70.4
WP_003360061.1\|1089995_1091537_+	hypothetical protein	A0A0A7RU22	Clostridium_phage	1.5e-05	43.5
WP_003360060.1\|1091549_1091984_+	hypothetical protein	NA	NA	NA	NA
WP_003360059.1\|1091970_1093056_+	hypothetical protein	NA	NA	NA	NA
WP_012721103.1\|1093068_1093410_+	hypothetical protein	A0A0A7S0S4	Clostridium_phage	2.7e-16	54.3
WP_003360056.1\|1093424_1094774_+	caspase family protein	A0A0A7RW86	Clostridium_phage	8.7e-74	73.5
WP_003360055.1\|1094775_1095756_+	hypothetical protein	A0A0A7RU61	Clostridium_phage	1.0e-111	61.3
WP_003360054.1\|1095778_1097017_+	hypothetical protein	A0A0A7RU28	Clostridium_phage	4.4e-197	81.3
WP_003360053.1\|1097031_1098927_+	hypothetical protein	A0A0A7RU09	Clostridium_phage	4.3e-119	52.6
WP_003360052.1\|1098932_1099187_+	hypothetical protein	A0A0A7S0T0	Clostridium_phage	1.1e-33	81.0
WP_003360051.1\|1099198_1100197_+	hypothetical protein	A0A0A7RW91	Clostridium_phage	1.5e-139	72.3
WP_003360049.1\|1100208_1101294_+	hypothetical protein	A0A0A7RU66	Clostridium_phage	2.7e-142	70.6

DBSCAN-SWA_2

1249406 : 1258851

Synechococcus_phage(28.57%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012721417.1\|1249406_1251962_+	selenium-dependent xanthine dehydrogenase	A0A0P0IVM8	Acinetobacter_phage	2.4e-11	33.1
WP_003359904.1\|1252602_1253082_+	5-(carboxyamino)imidazole ribonucleotide mutase	A0A2P0VNU7	Tetraselmis_virus	5.7e-28	49.4
WP_003359903.1\|1253081_1253786_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	A0A1D7SLB8	Cyanophage	3.9e-41	43.7
WP_003359902.1\|1253877_1255326_+	amidophosphoribosyltransferase	A0A1B1ISH6	uncultured_Mediterranean_phage	4.0e-56	32.1
WP_003359901.1\|1255386_1256382_+	phosphoribosylformylglycinamidine cyclo-ligase	M4QRQ6	Synechococcus_phage	2.0e-67	44.0
WP_003359899.1\|1256508_1257126_+	phosphoribosylglycinamide formyltransferase	M4QRX9	Synechococcus_phage	6.9e-26	39.3
WP_003359898.1\|1257351_1258851_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	Q58MG4	Prochlorococcus_phage	4.2e-69	47.2

DBSCAN-SWA_3

1782258 : 1875639

133

Clostridium_phage(60.66%)

tRNA,portal,integrase,tail,head,protease,terminase,capsid,plate

attL 1817907:1817925|attR 1865466:1865484

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_003362556.1\|1782258_1783128_+\|tRNA	tRNA pseudouridine(55) synthase TruB	NA	NA	NA	NA
WP_003362555.1\|1783140_1784061_+	bifunctional riboflavin kinase/FAD synthetase	A0A1V0SD03	Indivirus	3.7e-07	28.7
WP_003388351.1\|1784193_1784457_+	30S ribosomal protein S15	NA	NA	NA	NA
WP_003362553.1\|1784720_1786829_+	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA
WP_003362552.1\|1787003_1788305_+	insulinase family protein	G3MBJ8	Bacillus_virus	2.7e-48	30.0
WP_003362551.1\|1788381_1788654_+	YlmC/YmxH family sporulation protein	NA	NA	NA	NA
WP_003388343.1\|1788669_1789875_+	aspartate kinase	NA	NA	NA	NA
WP_012720936.1\|1790113_1790794_+\|protease	ATP-dependent Clp protease proteolytic subunit	NA	NA	NA	NA
WP_012721150.1\|1791019_1793269_+	DNA translocase FtsK	S5VNE3	Mycobacterium_phage	1.4e-87	49.7
WP_003362544.1\|1793390_1794728_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_003362543.1\|1794711_1795296_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA
WP_003388318.1\|1795443_1796502_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	6.3e-120	63.8
WP_003362541.1\|1796736_1798278_+	ribonuclease Y	NA	NA	NA	NA
WP_003362540.1\|1798416_1798677_+	stage V sporulation protein S	J9PTX7	Bacillus_phage	1.6e-08	39.8
WP_003362539.1\|1798839_1799706_+	decaprenyl-phosphate phosphoribosyltransferase	NA	NA	NA	NA
WP_012720946.1\|1799724_1801011_+	glycosyltransferase family 39 protein	NA	NA	NA	NA
WP_003362136.1\|1801007_1801364_+	EamA family transporter	NA	NA	NA	NA
WP_003362135.1\|1802052_1803246_+	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA
WP_003362134.1\|1803356_1803614_+	HPr family phosphocarrier protein	NA	NA	NA	NA
WP_003362133.1\|1803641_1803863_-	DUF378 domain-containing protein	NA	NA	NA	NA
WP_003362132.1\|1804114_1805545_+	adenylosuccinate lyase	NA	NA	NA	NA
WP_003362128.1\|1807793_1808168_-	helix-turn-helix transcriptional regulator	A0A142LP08	Marinitoga_camini_virus	1.8e-05	34.8
WP_003362127.1\|1808425_1808614_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003362126.1\|1808747_1808891_+	hypothetical protein	NA	NA	NA	NA
WP_003362125.1\|1808947_1809751_+	ORF6C domain-containing protein	A0A0A7RUE5	Clostridium_phage	2.3e-37	61.2
WP_003362124.1\|1809762_1810023_+	hypothetical protein	NA	NA	NA	NA
WP_003362123.1\|1810024_1810207_+	hypothetical protein	NA	NA	NA	NA
WP_003362122.1\|1810411_1811245_+	phage replisome organizer N-terminal domain-containing protein	A0A1S5SFJ6	Streptococcus_phage	2.4e-45	62.6
WP_003362121.1\|1811245_1811788_+	hypothetical protein	A0A2K9V2Y3	Faecalibacterium_phage	3.3e-08	26.7
WP_003362119.1\|1811790_1812300_+	hypothetical protein	NA	NA	NA	NA
WP_003362118.1\|1812299_1812614_+	hypothetical protein	NA	NA	NA	NA
WP_039774100.1\|1812613_1812892_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_173424647.1\|1812942_1813350_+	adenine methyltransferase	A0A0A7RUD1	Clostridium_phage	4.2e-64	82.2
WP_012047618.1\|1813414_1813726_+	hypothetical protein	NA	NA	NA	NA
WP_012047619.1\|1813779_1813944_+	hypothetical protein	NA	NA	NA	NA
WP_012047620.1\|1813960_1814233_+	hypothetical protein	NA	NA	NA	NA
WP_012047621.1\|1814291_1814501_+	hypothetical protein	NA	NA	NA	NA
WP_003359708.1\|1814556_1814820_+	hypothetical protein	NA	NA	NA	NA
WP_003359710.1\|1814887_1815070_+	hypothetical protein	NA	NA	NA	NA
WP_003359711.1\|1815089_1815242_+	hypothetical protein	NA	NA	NA	NA
WP_039774102.1\|1815283_1815508_+	hypothetical protein	NA	NA	NA	NA
WP_025775366.1\|1815564_1815996_+	hypothetical protein	NA	NA	NA	NA
WP_039774104.1\|1816108_1816822_+	hypothetical protein	NA	NA	NA	NA
WP_039774105.1\|1816818_1817004_+	hypothetical protein	NA	NA	NA	NA
WP_004442248.1\|1816990_1817140_+	hypothetical protein	NA	NA	NA	NA
WP_173424638.1\|1817151_1817322_+	hypothetical protein	NA	NA	NA	NA
WP_039774106.1\|1817311_1817707_+	nitroreductase	A0A0A7RTL7	Clostridium_phage	8.0e-44	63.6
1817907:1817925	attL	NA	NA	NA	NA
WP_039774107.1\|1817965_1818178_+	hypothetical protein	NA	NA	NA	NA
WP_039774108.1\|1818178_1818784_+\|integrase	tyrosine-type recombinase/integrase	A0A1L2BY87	Clostridium_phage	6.9e-87	76.1
WP_003362101.1\|1819081_1819564_+	hypothetical protein	D2J052	Enterococcus_phage	7.8e-09	27.7
WP_004442233.1\|1819563_1819992_+	hypothetical protein	A0A0A7RUV1	Clostridium_phage	9.0e-17	41.4
WP_033063276.1\|1820110_1820578_+\|terminase	phage terminase small subunit P27 family	A0A0A7RUQ4	Clostridium_phage	4.7e-35	55.3
WP_003362098.1\|1820574_1822269_+\|terminase	terminase large subunit	A0A0A7RUM0	Clostridium_phage	5.0e-167	53.8
WP_003362097.1\|1822501_1823749_+\|portal	phage portal protein	I2E8V3	Clostridium_phage	8.0e-98	47.3
WP_003362095.1\|1823726_1824323_+\|head,protease	HK97 family phage prohead protease	A0A1C8EA63	Bacillus_phage	1.9e-36	47.9
WP_003362094.1\|1824371_1825448_+\|capsid	phage major capsid protein	I2E8V4	Clostridium_phage	6.5e-88	51.7
WP_003362093.1\|1825493_1825778_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_003362092.1\|1825770_1826142_+\|head	phage head closure protein	A0A0A7RUH8	Clostridium_phage	8.9e-37	68.1
WP_003362091.1\|1826142_1826382_+	hypothetical protein	NA	NA	NA	NA
WP_003362090.1\|1826386_1826746_+	hypothetical protein	A0A0A7RUF1	Clostridium_phage	2.0e-46	82.4
WP_003362087.1\|1827159_1827768_+\|tail	tail protein	A0A0A7RUI3	Clostridium_phage	5.1e-74	69.8
WP_003362086.1\|1827825_1828203_+	hypothetical protein	A0A0A7RUF5	Clostridium_phage	1.5e-39	69.9
WP_003362085.1\|1828328_1828448_+	hypothetical protein	A0A0A7RUE3	Clostridium_phage	4.5e-11	76.9
WP_003362084.1\|1828505_1832345_+\|tail	phage tail tape measure protein	A0A0A7S163	Clostridium_phage	2.2e-74	33.5
WP_003362083.1\|1832337_1833039_+\|tail	phage tail family protein	A0A0A7RWN1	Clostridium_phage	3.8e-81	60.5
WP_003362082.1\|1833041_1834715_+\|tail	phage tail protein	A0A0A7RUI9	Clostridium_phage	1.0e-79	43.4
WP_003362081.1\|1834730_1836095_+\|plate	BppU family phage baseplate upper protein	A0A0A7S181	Clostridium_phage	1.2e-83	77.9
WP_158383945.1\|1837120_1838737_+	hypothetical protein	I1TJW8	Clostridium_phage	2.0e-48	29.2
WP_003362078.1\|1838757_1838958_+	D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
WP_003362077.1\|1838957_1839104_+	hypothetical protein	A0A0A7RTH5	Clostridium_phage	3.1e-09	64.4
WP_003362076.1\|1839174_1839453_+	hypothetical protein	A0A2H4J1Q4	uncultured_Caudovirales_phage	8.7e-21	53.8
WP_033063283.1\|1839471_1839666_+	hypothetical protein	NA	NA	NA	NA
WP_039774110.1\|1839708_1840473_+	N-acetylmuramoyl-L-alanine amidase	I1TJX3	Clostridium_phage	9.4e-49	58.4
WP_003362072.1\|1840930_1841125_+	hypothetical protein	A0A0A7RTH9	Clostridium_phage	1.4e-17	85.7
WP_003362071.1\|1841109_1841355_+	hypothetical protein	NA	NA	NA	NA
WP_003362070.1\|1841475_1841994_+	hypothetical protein	NA	NA	NA	NA
WP_003362069.1\|1842030_1842309_-	helix-turn-helix transcriptional regulator	A0A0A7S0F1	Clostridium_phage	1.1e-31	78.3
WP_003362067.1\|1842385_1842622_-	helix-turn-helix transcriptional regulator	A0A0A7RUG5	Clostridium_phage	3.0e-22	66.7
WP_003362066.1\|1842984_1843254_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_039774113.1\|1845457_1845709_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_052263753.1\|1846276_1846711_-	helix-turn-helix transcriptional regulator	A0A0A8WE28	Clostridium_phage	3.4e-11	36.0
WP_039774115.1\|1846882_1847113_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_039774117.1\|1847165_1847960_+	transporter	A0A2R2ZGJ9	Clostridioides_phage	2.7e-46	41.1
WP_039774121.1\|1847960_1848329_+	hypothetical protein	NA	NA	NA	NA
WP_039774123.1\|1848400_1848577_+	hypothetical protein	NA	NA	NA	NA
WP_039774125.1\|1848815_1849382_+	host-nuclease inhibitor Gam family protein	A0A2K9V2U0	Faecalibacterium_phage	2.6e-11	32.9
WP_039774127.1\|1849393_1850251_+	hypothetical protein	E5DV80	Deep-sea_thermophilic_phage	2.3e-56	47.1
WP_012704559.1\|1850253_1850400_+	hypothetical protein	NA	NA	NA	NA
WP_173424639.1\|1850415_1850592_+	hypothetical protein	NA	NA	NA	NA
WP_052263754.1\|1850745_1850946_+	hypothetical protein	NA	NA	NA	NA
WP_052263755.1\|1850972_1851719_+	hypothetical protein	A0A0A8WFH2	Clostridium_phage	3.7e-26	37.0
WP_173424640.1\|1853035_1853176_+	hypothetical protein	NA	NA	NA	NA
WP_039774129.1\|1853194_1853428_+	hypothetical protein	A0A0A7RTQ4	Clostridium_phage	3.1e-11	47.0
WP_012720968.1\|1853440_1854436_+	sigma-70 family RNA polymerase sigma factor	A0A0A0RV91	Bacillus_phage	8.3e-05	21.7
WP_039774131.1\|1854465_1854771_+	hypothetical protein	NA	NA	NA	NA
WP_052263758.1\|1855014_1855395_+	nucleotide pyrophosphohydrolase	R4T830	Halovirus	1.1e-10	46.4
WP_039774133.1\|1855422_1855620_+	hypothetical protein	NA	NA	NA	NA
WP_039774135.1\|1856133_1856847_+	hypothetical protein	A0A0A7RWW3	Clostridium_phage	1.7e-76	65.7
WP_039774138.1\|1856911_1857313_+	RusA family crossover junction endodeoxyribonuclease	A0A0A8WJX1	Clostridium_phage	3.4e-26	48.1
WP_039774139.1\|1857337_1857685_+	hypothetical protein	A0A0A7RTL9	Clostridium_phage	5.4e-28	56.1
WP_039774140.1\|1857781_1858042_+	hypothetical protein	NA	NA	NA	NA
WP_052263759.1\|1858038_1858335_+	hypothetical protein	NA	NA	NA	NA
WP_154219906.1\|1858476_1858644_+	hypothetical protein	NA	NA	NA	NA
WP_039774141.1\|1858677_1858866_+	hypothetical protein	NA	NA	NA	NA
WP_080307050.1\|1858834_1858987_+	hypothetical protein	NA	NA	NA	NA
WP_144311769.1\|1859262_1859361_-	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_039774142.1\|1859620_1860427_+	site-specific DNA-methyltransferase	B4XYT3	Lactobacillus_phage	7.0e-103	71.4
WP_039774143.1\|1860482_1860689_+	hypothetical protein	NA	NA	NA	NA
WP_012720879.1\|1860744_1861560_+	hypothetical protein	NA	NA	NA	NA
WP_158383947.1\|1861591_1861768_+	hypothetical protein	NA	NA	NA	NA
WP_039774144.1\|1861875_1862871_+\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	3.8e-26	29.3
WP_052263760.1\|1862947_1863175_+	hypothetical protein	NA	NA	NA	NA
WP_039774145.1\|1863264_1863456_+	hypothetical protein	NA	NA	NA	NA
WP_039774146.1\|1863452_1863671_+	hypothetical protein	NA	NA	NA	NA
WP_039774147.1\|1863681_1864119_+	hypothetical protein	NA	NA	NA	NA
WP_039774148.1\|1864948_1865380_+	DUF1259 domain-containing protein	NA	NA	NA	NA
WP_080307051.1\|1865535_1865736_+	hypothetical protein	A0A0A7RTM8	Clostridium_phage	5.0e-10	66.1
1865466:1865484	attR	NA	NA	NA	NA
WP_039774150.1\|1865851_1866091_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_039774151.1\|1866187_1866883_+	hypothetical protein	A0A0A8WFS6	Clostridium_phage	6.8e-46	50.7
WP_039774152.1\|1866875_1868333_+	DEAD/DEAH box helicase family protein	C9E2I7	Enterococcus_phage	9.5e-167	64.4
WP_039774153.1\|1868332_1869808_+\|portal	phage portal protein	A0A0A7RW62	Clostridium_phage	6.2e-174	63.6
WP_039774154.1\|1869807_1870743_+	hypothetical protein	A0A2H4J048	uncultured_Caudovirales_phage	9.6e-72	49.7
WP_039774155.1\|1870753_1871050_+	hypothetical protein	NA	NA	NA	NA
WP_039774156.1\|1871039_1871258_+	hypothetical protein	NA	NA	NA	NA
WP_039774157.1\|1871308_1871947_+	phage scaffolding protein	A0A0A7RW68	Clostridium_phage	2.4e-29	40.5
WP_039774158.1\|1871960_1872317_+	hypothetical protein	A0A2H4J872	uncultured_Caudovirales_phage	1.4e-44	77.1
WP_039774159.1\|1872337_1873372_+\|capsid	major capsid protein	A0A1J1GG50	Clostridium_phage	1.2e-118	64.2
WP_039774160.1\|1873424_1873625_+	hypothetical protein	A0A0A7RTZ2	Clostridium_phage	2.6e-06	48.2
WP_039774161.1\|1873627_1873936_+	hypothetical protein	A0A2H4J040	uncultured_Caudovirales_phage	1.1e-32	64.1
WP_039774162.1\|1873932_1874304_+	hypothetical protein	NA	NA	NA	NA
WP_039774163.1\|1874296_1874671_+	hypothetical protein	E7DNB1	Pneumococcus_phage	2.6e-12	30.2
WP_039774164.1\|1874670_1875009_+	hypothetical protein	A0A0A8WEH0	Clostridium_phage	1.5e-06	29.9
WP_039774165.1\|1875012_1875639_+	hypothetical protein	E7DNB3	Pneumococcus_phage	5.9e-41	48.9

DBSCAN-SWA_4

1883668 : 1895287

Clostridium_phage(63.64%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039774168.1\|1883668_1884538_+\|tail	phage tail family protein	E2ELJ6	Clostridium_phage	2.1e-81	53.8
WP_039774169.1\|1884541_1885636_+	siphovirus ReqiPepy6 Gp37-like family protein	E2ELJ7	Clostridium_phage	1.9e-87	47.2
WP_039774170.1\|1885635_1887510_+	PQQ-binding-like beta-propeller repeat protein	E2ELJ8	Clostridium_phage	8.2e-62	42.8
WP_039774171.1\|1887524_1887893_+	hypothetical protein	A0A0A7RTN0	Clostridium_phage	2.3e-08	70.0
WP_080307053.1\|1887885_1888008_+	XkdX family protein	A0A0A7S0E7	Clostridium_phage	5.3e-07	62.5
WP_004442190.1\|1888092_1888248_+	hypothetical protein	NA	NA	NA	NA
WP_003358571.1\|1888523_1888718_+	hypothetical protein	A0A0A7RU02	Clostridium_phage	3.0e-28	98.4
WP_039774173.1\|1888941_1889196_+	hemolysin XhlA family protein	A0A0A7RTX0	Clostridium_phage	8.2e-26	68.4
WP_052263762.1\|1889211_1889361_+	hypothetical protein	NA	NA	NA	NA
WP_039774174.1\|1889450_1890224_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4J8A3	uncultured_Caudovirales_phage	1.9e-89	65.8
WP_039774175.1\|1890413_1890662_+	hypothetical protein	NA	NA	NA	NA
WP_039774467.1\|1891317_1892142_+	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	3.3e-68	48.9
WP_052263763.1\|1892155_1893478_+	hypothetical protein	NA	NA	NA	NA
WP_144311770.1\|1893714_1894380_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	6.4e-54	51.6
WP_080307054.1\|1894366_1895287_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.5e-101	76.5

DBSCAN-SWA_5

1911049 : 1963247

Clostridium_phage(69.44%)

tRNA,portal,integrase,tail,head,protease,terminase,capsid,plate

attL 1915409:1915426|attR 1965543:1965560

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039774185.1\|1911049_1911874_+\|protease	CPBP family intramembrane metalloprotease	NA	NA	NA	NA
WP_003362052.1\|1913240_1914593_+\|tRNA	CCA tRNA nucleotidyltransferase	H7BUW3	unidentified_phage	1.6e-91	42.8
WP_003362051.1\|1914968_1915892_+	M28 family peptidase	NA	NA	NA	NA
1915409:1915426	attL	NA	NA	NA	NA
WP_003362037.1\|1916635_1917631_+	hypothetical protein	NA	NA	NA	NA
WP_003362036.1\|1917627_1918449_+	protein-glutamine gamma-glutamyltransferase	NA	NA	NA	NA
WP_003362035.1\|1918689_1918926_+	helix-turn-helix transcriptional regulator	A0A1V0E021	Clostridioides_phage	2.0e-05	43.5
WP_003362034.1\|1918926_1919379_+	peptide deformylase	E3SLL2	Synechococcus_phage	2.0e-14	41.7
WP_003362033.1\|1919681_1920518_+	MBL fold metallo-hydrolase	NA	NA	NA	NA
WP_003362032.1\|1920600_1920903_+	Dabb family protein	NA	NA	NA	NA
WP_003362031.1\|1920936_1921698_-	exonuclease domain-containing protein	NA	NA	NA	NA
WP_003362030.1\|1921969_1922746_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_052263764.1\|1923034_1924801_-	recombinase family protein	M9Q2G2	Clostridium_phage	2.5e-169	54.4
WP_003362128.1\|1924802_1925177_-	helix-turn-helix transcriptional regulator	A0A142LP08	Marinitoga_camini_virus	1.8e-05	34.8
WP_003362127.1\|1925434_1925623_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003362126.1\|1925756_1925900_+	hypothetical protein	NA	NA	NA	NA
WP_003362125.1\|1925956_1926760_+	ORF6C domain-containing protein	A0A0A7RUE5	Clostridium_phage	2.3e-37	61.2
WP_003362124.1\|1926771_1927032_+	hypothetical protein	NA	NA	NA	NA
WP_003362123.1\|1927033_1927216_+	hypothetical protein	NA	NA	NA	NA
WP_003362121.1\|1928253_1928796_+	hypothetical protein	A0A2K9V2Y3	Faecalibacterium_phage	3.3e-08	26.7
WP_003362119.1\|1928798_1929308_+	hypothetical protein	NA	NA	NA	NA
WP_003362118.1\|1929307_1929622_+	hypothetical protein	NA	NA	NA	NA
WP_039774100.1\|1929621_1929900_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA
WP_173424647.1\|1929950_1930358_+	adenine methyltransferase	A0A0A7RUD1	Clostridium_phage	4.2e-64	82.2
WP_012047618.1\|1930422_1930734_+	hypothetical protein	NA	NA	NA	NA
WP_012047619.1\|1930787_1930952_+	hypothetical protein	NA	NA	NA	NA
WP_012047620.1\|1930968_1931241_+	hypothetical protein	NA	NA	NA	NA
WP_012047621.1\|1931299_1931509_+	hypothetical protein	NA	NA	NA	NA
WP_003359708.1\|1931564_1931828_+	hypothetical protein	NA	NA	NA	NA
WP_039774102.1\|1932293_1932518_+	hypothetical protein	NA	NA	NA	NA
WP_025775366.1\|1932574_1933006_+	hypothetical protein	NA	NA	NA	NA
WP_039774104.1\|1933118_1933832_+	hypothetical protein	NA	NA	NA	NA
WP_039774105.1\|1933828_1934014_+	hypothetical protein	NA	NA	NA	NA
WP_004442248.1\|1934000_1934150_+	hypothetical protein	NA	NA	NA	NA
WP_173424638.1\|1934161_1934332_+	hypothetical protein	NA	NA	NA	NA
WP_039774106.1\|1934321_1934717_+	nitroreductase	A0A0A7RTL7	Clostridium_phage	8.0e-44	63.6
WP_039774107.1\|1934975_1935188_+	hypothetical protein	NA	NA	NA	NA
WP_039774108.1\|1935188_1935794_+\|integrase	tyrosine-type recombinase/integrase	A0A1L2BY87	Clostridium_phage	6.9e-87	76.1
WP_003362101.1\|1936091_1936574_+	hypothetical protein	D2J052	Enterococcus_phage	7.8e-09	27.7
WP_004442233.1\|1936573_1937002_+	hypothetical protein	A0A0A7RUV1	Clostridium_phage	9.0e-17	41.4
WP_033063276.1\|1937120_1937588_+\|terminase	phage terminase small subunit P27 family	A0A0A7RUQ4	Clostridium_phage	4.7e-35	55.3
WP_003362098.1\|1937584_1939279_+\|terminase	terminase large subunit	A0A0A7RUM0	Clostridium_phage	5.0e-167	53.8
WP_003362097.1\|1939511_1940759_+\|portal	phage portal protein	I2E8V3	Clostridium_phage	8.0e-98	47.3
WP_003362095.1\|1940736_1941333_+\|head,protease	HK97 family phage prohead protease	A0A1C8EA63	Bacillus_phage	1.9e-36	47.9
WP_003362094.1\|1941381_1942458_+\|capsid	phage major capsid protein	I2E8V4	Clostridium_phage	6.5e-88	51.7
WP_003362093.1\|1942503_1942788_+\|head,tail	phage gp6-like head-tail connector protein	NA	NA	NA	NA
WP_003362092.1\|1942780_1943152_+\|head	phage head closure protein	A0A0A7RUH8	Clostridium_phage	8.9e-37	68.1
WP_003362091.1\|1943152_1943392_+	hypothetical protein	NA	NA	NA	NA
WP_003362090.1\|1943396_1943756_+	hypothetical protein	A0A0A7RUF1	Clostridium_phage	2.0e-46	82.4
WP_003362089.1\|1943763_1944126_+	hypothetical protein	A0A0A7S158	Clostridium_phage	1.4e-47	78.6
WP_003362087.1\|1944170_1944779_+\|tail	tail protein	A0A0A7RUI3	Clostridium_phage	5.1e-74	69.8
WP_003362086.1\|1944836_1945214_+	hypothetical protein	A0A0A7RUF5	Clostridium_phage	1.5e-39	69.9
WP_003362085.1\|1945339_1945459_+	hypothetical protein	A0A0A7RUE3	Clostridium_phage	4.5e-11	76.9
WP_003362084.1\|1945516_1949356_+\|tail	phage tail tape measure protein	A0A0A7S163	Clostridium_phage	2.2e-74	33.5
WP_003362083.1\|1949348_1950050_+\|tail	phage tail family protein	A0A0A7RWN1	Clostridium_phage	3.8e-81	60.5
WP_003362081.1\|1951739_1953104_+\|plate	BppU family phage baseplate upper protein	A0A0A7S181	Clostridium_phage	1.2e-83	77.9
WP_039774186.1\|1953103_1955572_+	hypothetical protein	I1TJW8	Clostridium_phage	2.0e-108	32.5
WP_003362078.1\|1955765_1955966_+	D-Ala-D-Ala carboxypeptidase	NA	NA	NA	NA
WP_003362077.1\|1955965_1956112_+	hypothetical protein	A0A0A7RTH5	Clostridium_phage	3.1e-09	64.4
WP_003362076.1\|1956182_1956461_+	hypothetical protein	A0A2H4J1Q4	uncultured_Caudovirales_phage	8.7e-21	53.8
WP_033063283.1\|1956479_1956674_+	hypothetical protein	NA	NA	NA	NA
WP_039774110.1\|1956716_1957481_+	N-acetylmuramoyl-L-alanine amidase	I1TJX3	Clostridium_phage	9.4e-49	58.4
WP_003362072.1\|1957938_1958133_+	hypothetical protein	A0A0A7RTH9	Clostridium_phage	1.4e-17	85.7
WP_003362071.1\|1958117_1958363_+	hypothetical protein	NA	NA	NA	NA
WP_003362070.1\|1958483_1959002_+	hypothetical protein	NA	NA	NA	NA
WP_003362069.1\|1959038_1959317_-	helix-turn-helix transcriptional regulator	A0A0A7S0F1	Clostridium_phage	1.1e-31	78.3
WP_003362067.1\|1959393_1959630_-	helix-turn-helix transcriptional regulator	A0A0A7RUG5	Clostridium_phage	3.0e-22	66.7
WP_003362066.1\|1959992_1960262_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003362029.1\|1960509_1961217_+	response regulator transcription factor	W8CYM9	Bacillus_phage	1.6e-34	35.0
WP_003362028.1\|1961213_1962125_+	HAMP domain-containing histidine kinase	W8CYF6	Bacillus_phage	9.8e-29	30.0
WP_003362026.1\|1962326_1963247_+	ABC transporter ATP-binding protein	A0A2H4PQG7	Staphylococcus_phage	7.1e-43	45.6
1965543:1965560	attR	NA	NA	NA	NA

DBSCAN-SWA_6

1978830 : 1989345

Clostridium_phage(63.64%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039774190.1\|1978830_1979619_+	phage antirepressor KilAC domain-containing protein	I6SN64	Staphylococcus_virus	8.6e-90	67.1
WP_039774191.1\|1979774_1979966_-	hypothetical protein	NA	NA	NA	NA
WP_039774192.1\|1980034_1980241_+	hypothetical protein	NA	NA	NA	NA
WP_003392444.1\|1980293_1980452_+	hypothetical protein	NA	NA	NA	NA
WP_012721026.1\|1980460_1980625_+	hypothetical protein	NA	NA	NA	NA
WP_039774193.1\|1980880_1981930_+	YqaJ viral recombinase family protein	A0A0A7RWR9	Clostridium_phage	6.2e-27	29.3
WP_012720539.1\|1981942_1982827_+	recombinase RecT	W8EBF6	Geobacillus_phage	5.8e-42	37.9
WP_012721435.1\|1982829_1982976_+	hypothetical protein	NA	NA	NA	NA
WP_012720669.1\|1982991_1983168_+	hypothetical protein	NA	NA	NA	NA
WP_039774475.1\|1983261_1983561_+	hypothetical protein	NA	NA	NA	NA
WP_052263765.1\|1983594_1984515_+	hypothetical protein	A0A0A8WI94	Clostridium_phage	1.9e-48	57.3
WP_114621554.1\|1984453_1985296_+	ATP-binding protein	A0A1B1P7U2	Bacillus_phage	2.5e-26	30.5
WP_039774195.1\|1985315_1985549_+	hypothetical protein	A0A0A7RTQ4	Clostridium_phage	2.6e-10	38.6
WP_039774196.1\|1985560_1986439_+	hypothetical protein	NA	NA	NA	NA
WP_039774197.1\|1986440_1986761_+	hypothetical protein	NA	NA	NA	NA
WP_039774198.1\|1986763_1987006_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	A0A0K2CZ86	Paenibacillus_phage	2.1e-15	51.9
WP_052263766.1\|1987005_1987287_+	hypothetical protein	NA	NA	NA	NA
WP_039774199.1\|1987384_1987771_+	replication terminator protein	A0A0A7RUF3	Clostridium_phage	4.0e-48	79.7
WP_039774200.1\|1987796_1988507_+	hypothetical protein	A0A0A7RUC6	Clostridium_phage	1.3e-97	76.1
WP_039774201.1\|1988571_1988973_+	RusA family crossover junction endodeoxyribonuclease	A0A0A8WJX1	Clostridium_phage	2.6e-26	48.9
WP_039774202.1\|1988997_1989345_+	hypothetical protein	A0A0A7RTL9	Clostridium_phage	4.9e-29	57.9

DBSCAN-SWA_7

1998935 : 2028430

Clostridium_phage(63.64%)

portal,integrase,tail,terminase,capsid

attL 1989186:1989201|attR 2005346:2005361

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
1989186:1989201	attL	NA	NA	NA	NA
WP_039774205.1\|1998935_1999931_+\|integrase	tyrosine-type recombinase/integrase	A0A0K2CP59	Brevibacillus_phage	2.9e-26	29.6
WP_039774206.1\|2000022_2000214_+	hypothetical protein	NA	NA	NA	NA
WP_039774207.1\|2000461_2000899_+	hypothetical protein	NA	NA	NA	NA
WP_039774208.1\|2001229_2002357_+	Ig domain-containing protein	A0A2H4J270	uncultured_Caudovirales_phage	2.6e-15	37.7
WP_144311773.1\|2002458_2002659_+	hypothetical protein	A0A0A7RTM8	Clostridium_phage	4.2e-09	61.3
WP_012705283.1\|2002774_2003014_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_039774209.1\|2003199_2003484_+	hypothetical protein	W5RA17	Staphylococcus_phage	2.4e-05	42.9
WP_052263767.1\|2003562_2003886_+	HNH endonuclease	A0A0H3UZ74	Geobacillus_virus	1.2e-21	52.4
WP_039774210.1\|2003888_2004785_+\|terminase	terminase small subunit	A0A0A7RTY1	Clostridium_phage	4.0e-99	64.5
WP_039774211.1\|2004777_2006139_+\|terminase	PBSX family phage terminase large subunit	A0A0A7S0Q5	Clostridium_phage	3.7e-213	78.6
2005346:2005361	attR	NA	NA	NA	NA
WP_039774212.1\|2006138_2007647_+\|portal	phage portal protein	D9ZNC8	Clostridium_phage	3.1e-136	51.4
WP_039774213.1\|2007646_2008612_+	hypothetical protein	A0A2H4J048	uncultured_Caudovirales_phage	1.6e-82	47.4
WP_039774214.1\|2008621_2008918_+	hypothetical protein	NA	NA	NA	NA
WP_039774215.1\|2009054_2009582_+	hypothetical protein	NA	NA	NA	NA
WP_039774216.1\|2009714_2010329_+	phage scaffolding protein	A0A0A7RW68	Clostridium_phage	2.7e-30	41.7
WP_039774218.1\|2010755_2011808_+\|capsid	major capsid protein	D9ZND6	Clostridium_phage	2.6e-89	50.9
WP_039774220.1\|2011864_2012056_+	hypothetical protein	NA	NA	NA	NA
WP_052263768.1\|2012058_2012346_+	hypothetical protein	A0A0A7S0R4	Clostridium_phage	4.2e-26	67.1
WP_039774221.1\|2012362_2012734_+	hypothetical protein	NA	NA	NA	NA
WP_039774222.1\|2012726_2013101_+	hypothetical protein	E7DNB1	Pneumococcus_phage	1.5e-12	36.6
WP_039774223.1\|2013100_2013439_+	hypothetical protein	NA	NA	NA	NA
WP_039774224.1\|2013438_2014065_+	hypothetical protein	A0A1U9WR69	Streptococcus_virus	4.5e-41	46.2
WP_039774225.1\|2014120_2014570_+	hypothetical protein	NA	NA	NA	NA
WP_039774226.1\|2014529_2014709_+	hypothetical protein	NA	NA	NA	NA
WP_052263769.1\|2014781_2015411_+	hypothetical protein	NA	NA	NA	NA
WP_039774227.1\|2021378_2022245_+\|tail	phage tail family protein	E2ELJ6	Clostridium_phage	8.6e-83	54.0
WP_039774228.1\|2022248_2023343_+	siphovirus ReqiPepy6 Gp37-like family protein	E2ELJ7	Clostridium_phage	5.6e-87	47.2
WP_003360654.1\|2025294_2025687_+	hypothetical protein	B6SBV4	Clostridium_virus	3.5e-07	37.6
WP_003360655.1\|2025679_2025802_+	XkdX family protein	A0A0A7S0E7	Clostridium_phage	5.3e-07	62.5
WP_012099444.1\|2025913_2026585_+	SocA family protein	A0A0A7RUP2	Clostridium_phage	2.1e-52	47.3
WP_039774482.1\|2026588_2027017_+	hypothetical protein	A0A0A7S1G5	Clostridium_phage	8.4e-23	47.7
WP_039774229.1\|2027109_2027364_+	hemolysin XhlA family protein	A0A0A7RTX0	Clostridium_phage	8.2e-26	68.4
WP_003494435.1\|2027377_2027572_+	hypothetical protein	NA	NA	NA	NA
WP_039774230.1\|2027611_2028430_+	N-acetylmuramoyl-L-alanine amidase	A0A0A7RVQ3	Clostridium_phage	6.6e-24	40.5

DBSCAN-SWA_8

2042227 : 2053836

Clostridium_phage(54.55%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039774125.1\|2042227_2042794_+	host-nuclease inhibitor Gam family protein	A0A2K9V2U0	Faecalibacterium_phage	2.6e-11	32.9
WP_012704559.1\|2043664_2043811_+	hypothetical protein	NA	NA	NA	NA
WP_173424639.1\|2043826_2044003_+	hypothetical protein	NA	NA	NA	NA
WP_052263754.1\|2044156_2044357_+	hypothetical protein	NA	NA	NA	NA
WP_052263755.1\|2044383_2045130_+	hypothetical protein	A0A0A8WFH2	Clostridium_phage	3.7e-26	37.0
WP_039774235.1\|2045126_2046440_+	replicative DNA helicase	A0A077SK18	Escherichia_phage	2.6e-67	35.8
WP_173424640.1\|2046445_2046586_+	hypothetical protein	NA	NA	NA	NA
WP_039774129.1\|2046604_2046838_+	hypothetical protein	A0A0A7RTQ4	Clostridium_phage	3.1e-11	47.0
WP_012720968.1\|2046850_2047846_+	sigma-70 family RNA polymerase sigma factor	A0A0A0RV91	Bacillus_phage	8.3e-05	21.7
WP_039774236.1\|2047875_2048181_+	hypothetical protein	NA	NA	NA	NA
WP_052263758.1\|2048424_2048805_+	nucleotide pyrophosphohydrolase	R4T830	Halovirus	1.1e-10	46.4
WP_039774133.1\|2048832_2049030_+	hypothetical protein	NA	NA	NA	NA
WP_039774237.1\|2049123_2049516_+	hypothetical protein	A0A0A7RUF3	Clostridium_phage	1.9e-37	62.3
WP_039774238.1\|2049542_2050256_+	hypothetical protein	A0A0A7RWW3	Clostridium_phage	3.5e-74	64.0
WP_039774138.1\|2050320_2050722_+	RusA family crossover junction endodeoxyribonuclease	A0A0A8WJX1	Clostridium_phage	3.4e-26	48.1
WP_039774139.1\|2050746_2051094_+	hypothetical protein	A0A0A7RTL9	Clostridium_phage	5.4e-28	56.1
WP_039774140.1\|2051190_2051451_+	hypothetical protein	NA	NA	NA	NA
WP_052263759.1\|2051447_2051744_+	hypothetical protein	NA	NA	NA	NA
WP_154219906.1\|2051885_2052053_+	hypothetical protein	NA	NA	NA	NA
WP_039774141.1\|2052086_2052275_+	hypothetical protein	NA	NA	NA	NA
WP_080307050.1\|2052243_2052396_+	hypothetical protein	NA	NA	NA	NA
WP_144311769.1\|2052671_2052770_-	DUF2892 domain-containing protein	NA	NA	NA	NA
WP_039774142.1\|2053029_2053836_+	site-specific DNA-methyltransferase	B4XYT3	Lactobacillus_phage	7.0e-103	71.4

DBSCAN-SWA_9

2058943 : 2069047

Clostridium_phage(53.85%)

portal,capsid

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_080307051.1\|2058943_2059144_+	hypothetical protein	A0A0A7RTM8	Clostridium_phage	5.0e-10	66.1
WP_039774150.1\|2059259_2059499_+	PepSY domain-containing protein	NA	NA	NA	NA
WP_039774151.1\|2059595_2060291_+	hypothetical protein	A0A0A8WFS6	Clostridium_phage	6.8e-46	50.7
WP_039774152.1\|2060283_2061741_+	DEAD/DEAH box helicase family protein	C9E2I7	Enterococcus_phage	9.5e-167	64.4
WP_039774153.1\|2061740_2063216_+\|portal	phage portal protein	A0A0A7RW62	Clostridium_phage	6.2e-174	63.6
WP_039774154.1\|2063215_2064151_+	hypothetical protein	A0A2H4J048	uncultured_Caudovirales_phage	9.6e-72	49.7
WP_039774155.1\|2064161_2064458_+	hypothetical protein	NA	NA	NA	NA
WP_039774156.1\|2064447_2064666_+	hypothetical protein	NA	NA	NA	NA
WP_039774157.1\|2064716_2065355_+	phage scaffolding protein	A0A0A7RW68	Clostridium_phage	2.4e-29	40.5
WP_039774158.1\|2065368_2065725_+	hypothetical protein	A0A2H4J872	uncultured_Caudovirales_phage	1.4e-44	77.1
WP_039774159.1\|2065745_2066780_+\|capsid	major capsid protein	A0A1J1GG50	Clostridium_phage	1.2e-118	64.2
WP_039774160.1\|2066832_2067033_+	hypothetical protein	A0A0A7RTZ2	Clostridium_phage	2.6e-06	48.2
WP_039774161.1\|2067035_2067344_+	hypothetical protein	A0A2H4J040	uncultured_Caudovirales_phage	1.1e-32	64.1
WP_039774162.1\|2067340_2067712_+	hypothetical protein	NA	NA	NA	NA
WP_039774239.1\|2067704_2068079_+	hypothetical protein	E7DNB1	Pneumococcus_phage	3.4e-12	29.2
WP_039774164.1\|2068078_2068417_+	hypothetical protein	A0A0A8WEH0	Clostridium_phage	1.5e-06	29.9
WP_039774240.1\|2068420_2069047_+	hypothetical protein	E7DNB3	Pneumococcus_phage	1.7e-40	48.4

DBSCAN-SWA_10

2077073 : 2088691

Clostridium_phage(63.64%)

transposase,tail

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_039774168.1\|2077073_2077943_+\|tail	phage tail family protein	E2ELJ6	Clostridium_phage	2.1e-81	53.8
WP_039774241.1\|2077946_2079041_+	siphovirus ReqiPepy6 Gp37-like family protein	E2ELJ7	Clostridium_phage	8.1e-86	46.6
WP_039774242.1\|2079040_2080915_+	PQQ-binding-like beta-propeller repeat protein	E2ELJ8	Clostridium_phage	1.8e-61	42.5
WP_039774243.1\|2080929_2081298_+	hypothetical protein	A0A0A7RTN0	Clostridium_phage	5.0e-08	68.0
WP_080307053.1\|2081290_2081413_+	XkdX family protein	A0A0A7S0E7	Clostridium_phage	5.3e-07	62.5
WP_004442190.1\|2081497_2081653_+	hypothetical protein	NA	NA	NA	NA
WP_003358571.1\|2081928_2082123_+	hypothetical protein	A0A0A7RU02	Clostridium_phage	3.0e-28	98.4
WP_039774173.1\|2082346_2082601_+	hemolysin XhlA family protein	A0A0A7RTX0	Clostridium_phage	8.2e-26	68.4
WP_052263762.1\|2082616_2082766_+	hypothetical protein	NA	NA	NA	NA
WP_039774174.1\|2082855_2083629_+	N-acetylmuramoyl-L-alanine amidase	A0A2H4J8A3	uncultured_Caudovirales_phage	1.9e-89	65.8
WP_039774175.1\|2083818_2084067_+	hypothetical protein	NA	NA	NA	NA
WP_039774467.1\|2084722_2085547_+	DNA adenine methylase	A0A1S5PRR3	Streptococcus_phage	3.3e-68	48.9
WP_052263763.1\|2085560_2086883_+	hypothetical protein	NA	NA	NA	NA
WP_144311774.1\|2087119_2087452_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_144311775.1\|2087481_2087784_+	helix-turn-helix domain-containing protein	A0A0C5AJ29	Paenibacillus_phage	1.8e-24	60.4
WP_080307054.1\|2087770_2088691_+\|transposase	IS3 family transposase	A0A0C5AEA5	Paenibacillus_phage	1.5e-101	76.5

DBSCAN-SWA_11

2288018 : 2357666

Acinetobacter_phage(15.38%)

transposase,integrase

attL 2291786:2291802|attR 2350563:2350579

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_012720646.1\|2288018_2289296_+\|integrase	site-specific integrase	NA	NA	NA	NA
WP_003361863.1\|2289288_2290338_+	hypothetical protein	NA	NA	NA	NA
WP_003361861.1\|2290712_2291129_+	hypothetical protein	NA	NA	NA	NA
2291786:2291802	attL	NA	NA	NA	NA
WP_012720444.1\|2291987_2292665_+	hypothetical protein	NA	NA	NA	NA
WP_003361857.1\|2292827_2293028_-	DUF1657 domain-containing protein	NA	NA	NA	NA
WP_003361855.1\|2294601_2295195_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA
WP_003361854.1\|2295331_2297953_-	glycosyltransferase	NA	NA	NA	NA
WP_003361853.1\|2297975_2299325_-	glycosyltransferase	A0A1V0SAH6	Catovirus	1.9e-12	34.8
WP_003361852.1\|2299620_2300544_+	GDP-mannose 4,6-dehydratase	M1NML0	Moumouvirus	1.2e-42	36.9
WP_003361851.1\|2300818_2301415_-	DUF2812 domain-containing protein	NA	NA	NA	NA
WP_003361850.1\|2301419_2301743_-	PadR family transcriptional regulator	NA	NA	NA	NA
WP_012720740.1\|2302250_2303420_+	HNH endonuclease	NA	NA	NA	NA
WP_003361846.1\|2303727_2303970_+	TIGR04540 family protein	NA	NA	NA	NA
WP_039774266.1\|2303983_2307079_+	DUF499 domain-containing protein	NA	NA	NA	NA
WP_003361844.1\|2307078_2307648_+	DUF3780 domain-containing protein	A0A1P8DTE9	Proteus_phage	2.5e-30	41.7
WP_012721201.1\|2307659_2310605_+	DUF1156 domain-containing protein	K9MDJ7	Sulfolobus_virus	3.3e-09	23.2
WP_039774268.1\|2310625_2313328_+	DEAD/DEAH box helicase family protein	A0A2H4J643	uncultured_Caudovirales_phage	5.9e-21	22.9
WP_003361842.1\|2313577_2314582_+	hypothetical protein	NA	NA	NA	NA
WP_003361840.1\|2315222_2316347_+	radical SAM protein	NA	NA	NA	NA
WP_012721410.1\|2316903_2318175_+	cytosine permease	NA	NA	NA	NA
WP_003361836.1\|2318218_2319454_+	cytosine deaminase	NA	NA	NA	NA
WP_071647946.1\|2320122_2320752_+	VanZ family protein	NA	NA	NA	NA
WP_012721011.1\|2321602_2322892_+	lipase	NA	NA	NA	NA
WP_003363118.1\|2323576_2323858_+	hypothetical protein	NA	NA	NA	NA
WP_079994793.1\|2323962_2324376_+\|integrase	tyrosine-type recombinase/integrase	E2ELN7	Clostridium_phage	1.2e-13	37.4
WP_003363117.1\|2324690_2324984_-	DUF4342 domain-containing protein	NA	NA	NA	NA
WP_003363116.1\|2325234_2325528_-	DUF4342 domain-containing protein	NA	NA	NA	NA
WP_003363115.1\|2325803_2326784_-	dTDP-glucose 4,6-dehydratase	I7HTA3	Enterobacteria_phage	1.5e-70	42.9
WP_003363114.1\|2326825_2327887_-	glucose-1-phosphate thymidylyltransferase	G3MA50	Bacillus_virus	3.2e-31	35.0
WP_003363113.1\|2328088_2328988_+	glycosyltransferase	NA	NA	NA	NA
WP_003363112.1\|2329033_2330173_+	DegT/DnrJ/EryC1/StrS family aminotransferase	A0A2K9L470	Tupanvirus	1.4e-27	27.0
WP_012342119.1\|2330264_2330909_+	acetyltransferase	NA	NA	NA	NA
WP_003363110.1\|2330952_2332014_+	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_033063422.1\|2332473_2333481_-	glycosyltransferase family 2 protein	NA	NA	NA	NA
WP_075861074.1\|2334779_2335316_+	DUF5131 family protein	NA	NA	NA	NA
WP_003358306.1\|2335477_2336047_+	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	NA	NA	NA	NA
WP_012720857.1\|2336350_2338144_+	oleate hydratase	NA	NA	NA	NA
WP_003363153.1\|2338265_2340377_+	hypothetical protein	NA	NA	NA	NA
WP_003363155.1\|2340373_2341609_+	hypothetical protein	NA	NA	NA	NA
WP_003363156.1\|2341623_2343567_+	VWA domain-containing protein	NA	NA	NA	NA
WP_012720743.1\|2343671_2344172_+	nitroreductase family protein	NA	NA	NA	NA
WP_012721043.1\|2344586_2347064_+	DUF2974 domain-containing protein	NA	NA	NA	NA
WP_012720745.1\|2347296_2347944_+	hypothetical protein	NA	NA	NA	NA
WP_003358214.1\|2348344_2349838_+	sodium-dependent transporter	NA	NA	NA	NA
WP_144311779.1\|2349854_2349938_+	MetS family NSS transporter small subunit	NA	NA	NA	NA
WP_012720804.1\|2349986_2350292_+\|transposase	transposase	NA	NA	NA	NA
WP_003359767.1\|2350291_2351167_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.9e-39	38.2
2350563:2350579	attR	NA	NA	NA	NA
WP_003358404.1\|2351285_2352167_-	proline iminopeptidase-family hydrolase	NA	NA	NA	NA
WP_003363037.1\|2352248_2353337_-	aminopeptidase P family protein	NA	NA	NA	NA
WP_003363036.1\|2353846_2355193_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	6.5e-21	24.0
WP_003363035.1\|2355531_2356887_+	peptide MFS transporter	A0A0P0IY73	Acinetobacter_phage	8.9e-18	23.8
WP_144311777.1\|2357007_2357265_-\|transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	7.3e-14	48.1
WP_003363033.1\|2357277_2357421_-	hypothetical protein	NA	NA	NA	NA
WP_100067713.1\|2357516_2357666_-\|transposase	IS3 family transposase	NA	NA	NA	NA

DBSCAN-SWA_12

2957760 : 3009471

Clostridium_phage(65.52%)

transposase,portal,tail,integrase,head,protease,terminase,capsid

attL 2952576:2952635|attR 2994928:2995340

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
2952576:2952635	attL	NA	NA	NA	NA
WP_003358571.1\|2957760_2957955_-	hypothetical protein	A0A0A7RU02	Clostridium_phage	3.0e-28	98.4
WP_004442190.1\|2958230_2958386_-	hypothetical protein	NA	NA	NA	NA
WP_003360655.1\|2958470_2958593_-	XkdX family protein	A0A0A7S0E7	Clostridium_phage	5.3e-07	62.5
WP_003360654.1\|2958585_2958978_-	hypothetical protein	B6SBV4	Clostridium_virus	3.5e-07	37.6
WP_003360652.1\|2959010_2960903_-	hypothetical protein	E2ELJ8	Clostridium_phage	1.7e-54	44.9
WP_003360651.1\|2960902_2962060_-	siphovirus ReqiPepy6 Gp37-like family protein	A0A0C5AMZ5	Paenibacillus_phage	2.4e-64	34.1
WP_003360650.1\|2962063_2962933_-\|tail	phage tail family protein	E2ELJ6	Clostridium_phage	4.3e-50	41.8
WP_003360649.1\|2962948_2966464_-\|tail	phage tail tape measure protein	A0A0A7RVT5	Clostridium_phage	3.6e-111	75.8
WP_003360648.1\|2966480_2966600_-	hypothetical protein	A0A0A7RUE3	Clostridium_phage	1.2e-11	82.1
WP_003360647.1\|2966719_2967064_-	hypothetical protein	A0A0A7RUF5	Clostridium_phage	2.0e-38	69.7
WP_003360646.1\|2967125_2967725_-\|tail	tail protein	A0A0A7RUI3	Clostridium_phage	5.1e-74	69.5
WP_003360645.1\|2967810_2968164_-	hypothetical protein	A0A0A7S158	Clostridium_phage	3.4e-46	78.3
WP_003360644.1\|2968172_2968535_-	hypothetical protein	A0A0A7RUF1	Clostridium_phage	1.9e-23	48.3
WP_039774314.1\|2968535_2968904_-\|head	phage head closure protein	A0A0A7RUH8	Clostridium_phage	1.3e-35	65.0
WP_003360642.1\|2968893_2969187_-\|head,tail	phage gp6-like head-tail connector protein	A0A0A7RWM0	Clostridium_phage	1.9e-13	42.4
WP_003360641.1\|2969271_2970504_-\|capsid	phage major capsid protein	Q0SPK4	Clostridium_phage	6.3e-95	48.9
WP_021135641.1\|2970556_2971300_-\|protease	Clp protease ClpP	A0A0A7RUD3	Clostridium_phage	1.8e-97	75.4
WP_003360639.1\|2971292_2972543_-\|portal	phage portal protein	A0A0A7RUE7	Clostridium_phage	2.3e-185	79.1
WP_033063154.1\|2972586_2972769_-	hypothetical protein	A0A0A7RUH2	Clostridium_phage	6.3e-12	72.5
WP_003360636.1\|2972792_2974550_-\|terminase	terminase large subunit	A6M948	Geobacillus_virus	2.9e-117	42.7
WP_003360635.1\|2974550_2975036_-\|terminase	phage terminase small subunit P27 family	A6M947	Geobacillus_virus	2.6e-20	41.4
WP_033063140.1\|2975183_2975651_-	HNH endonuclease	Q0SPJ9	Clostridium_phage	3.6e-27	47.5
WP_039774317.1\|2975655_2976129_-	hypothetical protein	NA	NA	NA	NA
WP_003360632.1\|2976195_2976528_-	dihydrolipoyl dehydrogenase	A0A2K9V3J0	Faecalibacterium_phage	1.3e-07	30.4
WP_157750084.1\|2976553_2976712_-	hypothetical protein	NA	NA	NA	NA
WP_003360630.1\|2976763_2977387_-	hypothetical protein	NA	NA	NA	NA
WP_021135342.1\|2977505_2977688_-	hypothetical protein	NA	NA	NA	NA
WP_021135341.1\|2977741_2977969_-	hypothetical protein	NA	NA	NA	NA
WP_003363240.1\|2978057_2978252_-	hypothetical protein	NA	NA	NA	NA
WP_003363239.1\|2978252_2978507_-	hypothetical protein	NA	NA	NA	NA
WP_039774498.1\|2978569_2979094_-	GIY-YIG nuclease family protein	NA	NA	NA	NA
WP_039774318.1\|2979485_2979923_-	hypothetical protein	NA	NA	NA	NA
WP_003362246.1\|2979954_2980230_-	hypothetical protein	NA	NA	NA	NA
WP_039774320.1\|2980538_2983301_-	hypothetical protein	O64076	Bacillus_phage	2.9e-124	34.0
WP_003362248.1\|2983418_2983583_-	hypothetical protein	NA	NA	NA	NA
WP_003362249.1\|2983940_2985077_-	hypothetical protein	NA	NA	NA	NA
WP_003362250.1\|2985216_2985966_-	type II toxin-antitoxin system HicA family toxin	NA	NA	NA	NA
WP_003362251.1\|2986124_2986589_-	hypothetical protein	NA	NA	NA	NA
WP_003362252.1\|2986806_2987448_-	hypothetical protein	NA	NA	NA	NA
WP_003362253.1\|2987889_2988540_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003362255.1\|2988671_2988830_-	hypothetical protein	NA	NA	NA	NA
WP_003362256.1\|2988822_2989152_-	hypothetical protein	NA	NA	NA	NA
WP_003362257.1\|2989431_2989635_+	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_039774321.1\|2989758_2991180_+\|integrase	tyrosine-type recombinase/integrase	NA	NA	NA	NA
WP_003362261.1\|2991234_2991918_-	metallophosphoesterase	NA	NA	NA	NA
WP_003362262.1\|2992068_2992428_-	hypothetical protein	A0A0A7S0D9	Clostridium_phage	1.3e-08	39.3
WP_003362263.1\|2992527_2992905_-	hypothetical protein	A0A0A7S0D9	Clostridium_phage	1.4e-08	41.8
WP_003362264.1\|2993427_2993907_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA
WP_003362265.1\|2993906_2994869_-\|integrase	tyrosine-type recombinase/integrase	A5X9F3	Aeromonas_virus	1.0e-07	28.4
WP_003362266.1\|2994922_2996935_-	ATP-dependent helicase	S5M596	Bacillus_phage	4.3e-69	30.5
2994928:2995340	attR	NA	NA	NA	NA
WP_003362267.1\|2997029_2997578_-	DUF523 domain-containing protein	NA	NA	NA	NA
WP_003362268.1\|2997707_2998367_-	amino acid ABC transporter permease	NA	NA	NA	NA
WP_003362269.1\|2998368_2999175_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_003362271.1\|2999631_3001113_+	nicotinate phosphoribosyltransferase	G3MA18	Bacillus_virus	5.0e-123	48.9
WP_003362272.1\|3001254_3002775_-	YfcC family protein	NA	NA	NA	NA
WP_003362273.1\|3002948_3003173_-	hypothetical protein	NA	NA	NA	NA
WP_003362274.1\|3003556_3004720_-	iron-containing alcohol dehydrogenase	NA	NA	NA	NA
WP_003362276.1\|3005065_3005413_+	hypothetical protein	NA	NA	NA	NA
WP_003362277.1\|3005463_3006087_-	CoA pyrophosphatase	NA	NA	NA	NA
WP_003362278.1\|3006385_3007660_+	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA
WP_003362279.1\|3007858_3008077_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_003359768.1\|3008290_3008596_+\|transposase	transposase	NA	NA	NA	NA
WP_003359767.1\|3008595_3009471_+\|transposase	IS3 family transposase	A0A1B1P773	Bacillus_phage	5.9e-39	38.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

2. NZ_CP006909

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP006909_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006909_1

153427-154089

TypeI-B

NA:II-B

Consensus_repeat	Method
TTTAAATACATCTAATGTAGAAGTT	CRISPRCasFinder
TTTAAATACATCTAATNTA	CRT

10 spacers

cas5,cas7b,cas8b1,cas6,c2c10_CAS-V-U3

The CRISPR arrays of NZ_CP006909_1

>merge|NZ_CP006909|1|153427-154089|CRISPRCasFinder,CRT
TTTAAATACATCTAATATAAAAGTTAAACTTATATTTATGCATTTGTAAAACCTCCGTTCGTTTGTTTAAATATATCCAATATAGAAGTTAAATTATGAAAAATCTTATATCTTTTTTTATTTTTTCGGTAGTTTAAATACATCTAATGTAGAAGTTAAACTATATTAGGTAGATTATTATACTTTTTAAATACATCTAATGTAGAAGTTAAACTTTTCTATTCTGCGCCTCTCTTATAAAAAAGAACCCTTTAAATACATCTAATGTAAAAGTTGAACCATTAAATTTATTAAGCGAAGGAGTAGGTATAAATAGTTTAAATACATCCAATGCAGAAGTTAAGCTTAAATAAAACTAAAAATTTTTATAAATCGGTAGTTTAAATATATCTAATATATAAGTTAAATCCATCTTACTTCATTTTCCATATTTCAAATATGCGTGTTTAAATACATCTAATGTAGCAGTTAAACTTAGAAAAATTAAAAAACATGGAGGAAAATAGTAGTTTAAATACATATAATGTACAAGTTAAACTACATTTTTATATTTTATAAACATATTTAAATACATCTAATGTAGAAGTTAAGTAGAAGCTAAATTGAAATTTTATAATAAGTTATGATCTGGCATGATATTTAAATACATTTCATATAGAAGTT

>NZ_CP006909|1|1|153427-154089|CRISPRCasFinder
TTTAAATACATCTAATATAAAAGTT	AAACTTATATTTATGCATTTGTAAAACCTCCGTTCGTTTG
TTTAAATATATCCAATATAGAAGTT	AAATTATGAAAAATCTTATATCTTTTTTTATTTTTTCGGTAG
TTTAAATACATCTAATGTAGAAGTT	AAACTATATTAGGTAGATTATTATACTT
TTTAAATACATCTAATGTAGAAGTT	AAACTTTTCTATTCTGCGCCTCTCTTATAAAAAAGAACCC
TTTAAATACATCTAATGTAAAAGTT	GAACCATTAAATTTATTAAGCGAAGGAGTAGGTATAAATAG
TTTAAATACATCCAATGCAGAAGTT	AAGCTTAAATAAAACTAAAAATTTTTATAAATCGGTAG
TTTAAATATATCTAATATATAAGTT	AAATCCATCTTACTTCATTTTCCATATTTCAAATATGCGTG
TTTAAATACATCTAATGTAGCAGTT	AAACTTAGAAAAATTAAAAAACATGGAGGAAAATAGTAG
TTTAAATACATATAATGTACAAGTT	AAACTACATTTTTATATTTTATAAACATA
TTTAAATACATCTAATGTAGAAGTT	AAGTAGAAGCTAAATTGAAATTTTATAATAAGTTATGATCTGGCATGATA
TTTAAATACATTTCATATAGAAGTT

>NZ_CP006909|1|1|153427-154083|CRT
TTTAAATACATCTAATATA	AAAGTTAAACTTATATTTATGCATTTGTAAAACCTCCGTTCGTTTG
TTTAAATATATCCAATATA	GAAGTTAAATTATGAAAAATCTTATATCTTTTTTTATTTTTTCGGTAG
TTTAAATACATCTAATGTA	GAAGTTAAACTATATTAGGTAGATTATTATACTT
TTTAAATACATCTAATGTA	GAAGTTAAACTTTTCTATTCTGCGCCTCTCTTATAAAAAAGAACCC
TTTAAATACATCTAATGTA	AAAGTTGAACCATTAAATTTATTAAGCGAAGGAGTAGGTATAAATAG
TTTAAATACATCCAATGCA	GAAGTTAAGCTTAAATAAAACTAAAAATTTTTATAAATCGGTAG
TTTAAATATATCTAATATA	TAAGTTAAATCCATCTTACTTCATTTTCCATATTTCAAATATGCGTG
TTTAAATACATCTAATGTA	GCAGTTAAACTTAGAAAAATTAAAAAACATGGAGGAAAATAGTAG
TTTAAATACATATAATGTA	CAAGTTAAACTACATTTTTATATTTTATAAACATA
TTTAAATACATCTAATGTA	GAAGTTAAGTAGAAGCTAAATTGAAATTTTATAATAAGTTATGATCTGGCATGATA
TTTAAATACATTTCATATA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006909.1\|WP_012291550.1\|151242_151476_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110092.1\|149280_149466_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_032072312.1\|159555_160287_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP006909.1\|WP_040110100.1\|160690_161275_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_003401881.1\|148700_148841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110091.1\|148862_149255_+\|LemA-family-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_033066578.1\|157663_159529_-\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NZ_CP006909.1\|WP_040110099.1\|155823_156585_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP006909.1\|WP_040110178.1\|152192_152660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110101.1\|161368_161602_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110094.1\|150660_151107_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_CP006909.1\|WP_040110096.1\|153009_153237_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110095.1\|151494_152139_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_144311780.1\|161641_162784_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c10_CAS-V-U3	-	gnl\|CDD\|223747
NZ_CP006909.1\|WP_040110097.1\|154104_154443_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_158383965.1\|163983_164160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110090.1\|148155_148611_+\|prepilin-peptidase	unknown	unknown	unknown
NZ_CP006909.1\|WP_039698860.1\|156675_157614_-\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP006909.1\|WP_040110093.1\|149546_150575_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP006909.1\|WP_040110102.1\|163163_163709_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185641

Protein	Function_ID	Function_description	E-value
NZ_CP006909.1\|WP_040110102.1\|163163_163709_-\|hypothetical-protein	gnl\|CDD\|185641	PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional.	0.00139364
NZ_CP006909.1\|WP_039698860.1\|156675_157614_-\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	3.24462e-20
NZ_CP006909.1\|WP_040110099.1\|155823_156585_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	4.12745e-36
NZ_CP006909.1\|WP_032072312.1\|159555_160287_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	2.62223e-10
NZ_CP006909.1\|WP_144311780.1\|161641_162784_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.4672e-25
NZ_CP006909.1\|WP_040110094.1\|150660_151107_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	5.39924e-46
NZ_CP006909.1\|WP_040110093.1\|149546_150575_+\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	2.83347e-40

>NZ_CP006909.1|WP_040110096.1|153009_153237_+|hypothetical-protein
MSNMSYCRFQNTVEDLEECLNALTDREELSIRENNAAKRMLKNITEWIRAECIVDGDGEIDYEEIELIINQCKEK
>NZ_CP006909.1|WP_040110178.1|152192_152660_-|hypothetical-protein
MFIVKNYVNHVIFICIAVEILSLIILVSRKCSIENIILLYILPFILVLFITILNNFKDSNKSNIDDKYELIDNLDLYHSKNQFIQKKEINNEIIYCFSYIDREQNISTEIIKENTENHVIVKKINHYKAYVEIYKNIYDKKNVYIIYLPKRLALT
>NZ_CP006909.1|WP_040110095.1|151494_152139_+|hypothetical-protein
MMLNINKKLMNLPDDKKEKVKKIINNNSYTKQIFNLINIMLEKELTQEQMRKFAKLNLLILKRQSKLCIEEYKMYFSIKKQFPVKFNEDNIGYENNIRSSIDLNMYISDTVKTICIVGAALSSQIDEIQEKNIISEHELCQILSLNYILWTKNKKKVERKMENPKWSDIMYIYDCETVYNRKTATDKGFWNTSPIYTALTECKFKNDLCCSKKQ
>NZ_CP006909.1|WP_012291550.1|151242_151476_+|hypothetical-protein
MNLNKQITKHLIEMDYNNINNFKKDIIGNKEIDIIKKIDIISTLNAAIAVINESKGINNIDNDNLINIKDDFKFAFI
>NZ_CP006909.1|WP_040110094.1|150660_151107_+|single-stranded-DNA-binding-protein
MNKVVLIGRLTKDPELKFTPGNGTAVANFTLAVDRRFSKDGQREADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRSYEAKDGTKRYITEVIAEEVKFLEWGDKATTDSSYNNGSESSYQSGQNFGNGNSFDDDIIPVDDGDIPF
>NZ_CP006909.1|WP_040110093.1|149546_150575_+|C40-family-peptidase
MIKNKLKIILCSAIIGGSIIGFYHPIVNAAPTEKDLTIEIQKLDNDLSNLTIKLNDNKDKNSKLINEIKQNEKFIQNKKEEIKETENMLNAQMRDYYIENDNNSNNALVLLLSSENMSDFLNKAKIMKIVLEEGNTTIKTLEKDKQDIIKTNEKLSKDKKEIEKNTSSIKNDFKSLGDKKKELKVKLEELNKAKINNASNTNSIIAQQNHAEYNDFLKTGSVVNSKNDIGNSVVNLATKFLGVPYVWGGTTPQGFDCSGLVLYCYNAYGISLPRISQEQQQVGIDVPLSQAKAGDLVFFHGYPATHVGIYMGNGYYIHAPHTGDVVKISPLGDYTNIKRIMS
>NZ_CP006909.1|WP_040110092.1|149280_149466_-|hypothetical-protein
MEEIFKIIYLLPFDSSSSEGYSKSTTVENATDKLKLYLSNKYNIDFADIAILSCTPIQIIQ
>NZ_CP006909.1|WP_040110091.1|148862_149255_+|LemA-family-protein
MYSVLLMIIFSLYIIHTLLQYLENHKCKKQKQLESIYQKRNAIIPILISIAESTIYDNKVIQSELNHLKDNLNDLRINDNDLMVVNYNISTSLDNFIICSSNTPELKENIEFMKLVLEIEEAEADIKRLK
>NZ_CP006909.1|WP_003401881.1|148700_148841_+|hypothetical-protein
MIIKNQKSKSKTKKFFKKYANKRVRQYPYQYTIQGNNYKKLLYCHL
>NZ_CP006909.1|WP_040110090.1|148155_148611_+|prepilin-peptidase
MVIKNIILFILTNIYLIILYKASIRDIKERIVLNRTCLIEYILAFLIAILLKIPIKYILINSIWLFAIMYILQLVYGLMTDEIGIGGGDIKLAPAITLFIYPYSYIGILIGLLLSVLDPYIFKRKNKECPFVIYYFLSCIIAVIARIFHVI
>NZ_CP006909.1|WP_040110097.1|154104_154443_-|hypothetical-protein
MYLKSISLNIKREREGVKMKKKSIDRACYVSILPDLYINEPSDGLILIDKISKIHYELATDTPCDRSDLTCLNIDYQNSNLNILMEIKENLSFTHIVRDSHGFIFAVEIVDL
>NZ_CP006909.1|WP_040110099.1|155823_156585_-|type-I-B-CRISPR-associated-protein-Cas5
MEAIKFNLSGPTAFFKKPDVNSYAYFTYNNIHKIALLGILGSIIGLKGYNQQKSIDTYPEFYDKLKTLKISIVPKSKTGYFTKKFQTFTNNTGFYNIDINKRPCTLVYREQWLENVSWDIYILLDENSVDKKILNKLKDYLLNKKCHFIPYLGKNDHTADITNVELINLKAIQAHEKLIRIQSLFLTDNFNITGEKHSPNERLIILKEMLPTELDEFDNSYRFSNLSFTNLIVQPNTSKTLIYQDSLSNLYFF
>NZ_CP006909.1|WP_039698860.1|156675_157614_-|type-I-CRISPR-associated-protein-Cas7
MNKKVYGLLGVTAVRSNYNADFSSHPRTSATGEFIATDKTFKYACRKYWTLDKEKVLAFSNLNDNLNPMTLQEKYEYLFNTTIDKKTTKPIDVLSNLFSCLDVLNFGATFAISKLNFSINGAVQIQQGKNVYEYAKAEKLSLLTPYRNPKDKDDGSEKGRTTTAEQHILDRAEFIYPFSINPENYDEYVGLVPNFNGYTEDAYIKFKEAARVGVTSLNTCSKAGCENNFALFIELKDSSKAYLPNLSSYLKYDFDSINIFDLTNIFTELLEEIKEEVEKVEVYYNKYLSDIVIPNTDIKVERRNILTGKEMI
>NZ_CP006909.1|WP_033066578.1|157663_159529_-|hypothetical-protein
MIIDMMHNFKHLYDENGDNLIVDNYPLKQGVYIIVNDRGIRDFMVIKDKEAIPKDKEELFKYLRHRDYLSILKQYDTNKAVSGRAKSIHSNNFLSLFIRENKSSHILEGSSLNPSLEQQVGWYFDQFKKWQEEERQAHNNNDPSNPQEFILTTLEDFDEQLFNKSKKAILNSLSNLPELLSEYTLADKDYIRIFYEMPIEYYNKEYKRYMIRKIFNKNVYHIFKDNNVYGISDIDLTTNNNKPSLLLYSMKTRVPLRLDFDTLLIAQKLFDFLYFYKVPKYNKESKALEYVNSIYKTLYIPMDFNIDNLDLNKYTNTGQPVYYITTGNGQSFNVINYDIIYPFDSNIDFSFNDYLSLDEDVYENDEDNISDTSNISNIKTLLDLERIVDKYFFNFNLVSNYHSDKFINNKKYTLPNNISCMLFSSKHLFHDWFRKGIDLDIIDPITNVMDNLISLWANDPDISLIKIKNMLNLRWSILDYLYEREGYAPMEVKEHFEAIHYNLKEKIHDKSLEEKYINNTEEFYYACGQLIYYLLTQNKKTLKKQQSTSKFLQCRNSSTLKIEILKLYEEVANNISTYNYRFNNLYSMVSTYNDSNDTKDYIDYLLGGLYQKSIIYEKKKQ
>NZ_CP006909.1|WP_032072312.1|159555_160287_-|CRISPR-associated-endoribonuclease-Cas6
MRTIVFFSTVIDMLSYYELLLEIKLNKDIHFSKSYEMLSKFFNRVMLTDNYLKTLHERKGVKLYSFSGLYPAATNQIYKRNALYKIRIRSFDPEFICAMQFSLSQIQDNDINIISIKFIKNQQQFITELVSINPVIFSIWEKQNYWQIGDNIDLLGKQLTNNLLHKYNTISCNKLTAQDTIFHCLNITNNKTIYIPYKKGLLLGNKLKIQVKEDDISQTLATVALGAGIGEKNSIGMGFCYGH
>NZ_CP006909.1|WP_040110100.1|160690_161275_+|hypothetical-protein
MINMELVNMVNKKNSLYTEDYLKLDPAIEPLVNYINNYFPTVASCSSHKNRKGKYIGNAYVLFYLSKKDIKQYFDLKQKLEYKGCLYNVVLNLYCVENGNITEKYSFIKNQETKYLGCVLEIKPKFSFLNREKLFMAYYKECNIPFLEEKINITLERENYKNTINPSFSVYKYIEKEPNIVKEYKKQKFNSIMH
>NZ_CP006909.1|WP_040110101.1|161368_161602_+|hypothetical-protein
MKSRDFCKHCGEKLVVRSKEDKDSNNIIFFKGCPICGYSIRADISEVSAMESFNSEKEYYNTINSIALIRNTTNFKL
>NZ_CP006909.1|WP_144311780.1|161641_162784_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MKGVDIIEITITSKIQIYPTNEQIEILNNTMFQVRKALNYISKYIFNNNCLNQKKINEDTYYYSRETYGLKSQMAQSCIKTAIAKYKTNKSNGHDFTLVQFKNLEYDIVWNRDYSIKNGIFSINSLQGRLKIPYETKGMEKYFDGSYSFGTAKLVFKFNKCFLHIPMTKDYLQTTPFKINKIVGIDLGINFLATIYDSYGKTTFYNGKHIKAKRGHYKILRKQLQKCGSKSAKRKIKSIGSRENRYVNDINHTITKALVDKYGINTLFVLEDLTNVRTATEKVNINNRYVSVSWAFYQFRQLLEYKAKMNKSIVISVNPKYTSQTCPKCGYIEKTNRDKKKHIFKCKNCNYQSNDDRIGAINLWRKGLEYIEQSSKEHSE
>NZ_CP006909.1|WP_040110102.1|163163_163709_-|hypothetical-protein
MLLIFKKTFNQKIQELKCIIENLNHENIKLKEENIKLREENKKLDNDLLKITEKERKLNSLFLDFILGNNDNFRKEQKDIIIKSDILTLNDVLKESGNYNISETFWFIDLTNPNNKLEICYYIDSENESWYSAERIIVYKENVKVQSIYTGQLQENVNAYEIIKKHLNSNFYCKITTKKFE
>NZ_CP006909.1|WP_158383965.1|163983_164160_+|hypothetical-protein
MNKRKVRYKNGEWQDFWFKGKRNPCGCGSNIFHEELLINGKVIGVCNACNEDIYKDNG

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Crispr_ID: NZ_CP006909_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP006909_2

154796-155742

TypeI-B

II-B

Consensus_repeat	Method
TTTAAATACATNTAATGTANAAGTTAAAC	CRT
TTTAAATACATCTAATGTAGAAGTTAAAC	CRISPRCasFinder
GTTTAACTTCTACATTAGATGTATTTAAA	PILER-CR

14 spacers

cas5,cas7b,cas8b1,cas6,c2c10_CAS-V-U3

The CRISPR arrays of NZ_CP006909_2

>merge|NZ_CP006909|2|154796-155742|CRT,CRISPRCasFinder,PILER-CR
TTTAAATACATATAATATAGGAGTTAAACAAAGATAAAAAACAATTGTAAGTATTATTAATTTTAAATACATATAATGTAAAAGTTGAACATAAAAACTGAAAGATTTTTAATATTCCTAAACATGTTTAAATACATCTAATGTAGAAGTTAAACTTGTTTTTTATAGAATTTAGCATTACAAAAACCTCCGTTTAAATACACCTAATGTAAAAGTTAAACTTTATTTGTTTTTATTGTTACTATTAACACGTTTAAATACATGTAATGTAAAAGTTAAACTTCCCCTTTTCAGATTATAAATTTAATGTTTCGTTTAAATACATCTAATGTAGAAGTTAAACCATCCAAAACTCTTCTCTTTTTTTGCAATTGTTCTCTGTTTAAATACATATAATGTATAAGTTAAATTCAGTGTTGTAGCTAACTTTATAATAGTAGTTATGGTTTAAATACATCTAATGTACAAGTTAAACAAATCATCTATTTTATATTGGTAATATATTTACTATAAATCGGTAGTTTAAATATATCTAATATATAAGTTAAACCCAATTTACTCCATTTTTCATATTTCAAATATGCGTGTTTAAATACATCTAATGTAGAAGTTAAACGTATCTTATTTTTAGGTAAAACCTCTCTTAAATTCTTGTTTAAATACATATAATGTAGAAGTTAAACTTTTCTATTCTGCACCTCTCTTATAAAAAAAGAACCCTTTAAATACATCTAATGTAGAAGTTAAACTTATATCTATGCATTTGCAAAACCTCCATTTCCTGTTGTTTAAATACATATAATATATAAGTTAAACTATTCCTTTTTATTTCTTTTTATAAAAATTATTATGTTTAAATACATCTAATGTAGAAGTTAAACTATTTAATTCTTTAATTACCTTTTTCTGTTCTTTACATTTAAATACATCTAATGTAGAAGTTAAAC

>NZ_CP006909|2|2|154796-155742|CRT
TTTAAATACATATAATATAGGAGTTAAAC	AAAGATAAAAAACAATTGTAAGTATTATTAAT
TTTAAATACATATAATGTAAAAGTTGAAC	ATAAAAACTGAAAGATTTTTAATATTCCTAAACATG
TTTAAATACATCTAATGTAGAAGTTAAAC	TTGTTTTTTATAGAATTTAGCATTACAAAAACCTCCG
TTTAAATACACCTAATGTAAAAGTTAAAC	TTTATTTGTTTTTATTGTTACTATTAACACG
TTTAAATACATGTAATGTAAAAGTTAAAC	TTCCCCTTTTCAGATTATAAATTTAATGTTTCG
TTTAAATACATCTAATGTAGAAGTTAAAC	CATCCAAAACTCTTCTCTTTTTTTGCAATTGTTCTCTG
TTTAAATACATATAATGTATAAGTTAAAT	TCAGTGTTGTAGCTAACTTTATAATAGTAGTTATGG
TTTAAATACATCTAATGTACAAGTTAAAC	AAATCATCTATTTTATATTGGTAATATATTTACTATAAATCGGTAG
TTTAAATATATCTAATATATAAGTTAAAC	CCAATTTACTCCATTTTTCATATTTCAAATATGCGTG
TTTAAATACATCTAATGTAGAAGTTAAAC	GTATCTTATTTTTAGGTAAAACCTCTCTTAAATTCTTG
TTTAAATACATATAATGTAGAAGTTAAAC	TTTTCTATTCTGCACCTCTCTTATAAAAAAAGAACCC
TTTAAATACATCTAATGTAGAAGTTAAAC	TTATATCTATGCATTTGCAAAACCTCCATTTCCTGTTG
TTTAAATACATATAATATATAAGTTAAAC	TATTCCTTTTTATTTCTTTTTATAAAAATTATTATG
TTTAAATACATCTAATGTAGAAGTTAAAC	TATTTAATTCTTTAATTACCTTTTTCTGTTCTTTACA
TTTAAATACATCTAATGTAGAAGTTAAAC

>NZ_CP006909|2|2|154922-155742|CRISPRCasFinder
TTTAAATACATCTAATGTAGAAGTTAAAC	TTGTTTTTTATAGAATTTAGCATTACAAAAACCTCCG
TTTAAATACACCTAATGTAAAAGTTAAAC	TTTATTTGTTTTTATTGTTACTATTAACACG
TTTAAATACATGTAATGTAAAAGTTAAAC	TTCCCCTTTTCAGATTATAAATTTAATGTTTCG
TTTAAATACATCTAATGTAGAAGTTAAAC	CATCCAAAACTCTTCTCTTTTTTTGCAATTGTTCTCTG
TTTAAATACATATAATGTATAAGTTAAAT	TCAGTGTTGTAGCTAACTTTATAATAGTAGTTATGG
TTTAAATACATCTAATGTACAAGTTAAAC	AAATCATCTATTTTATATTGGTAATATATTTACTATAAATCGGTAG
TTTAAATATATCTAATATATAAGTTAAAC	CCAATTTACTCCATTTTTCATATTTCAAATATGCGTG
TTTAAATACATCTAATGTAGAAGTTAAAC	GTATCTTATTTTTAGGTAAAACCTCTCTTAAATTCTTG
TTTAAATACATATAATGTAGAAGTTAAAC	TTTTCTATTCTGCACCTCTCTTATAAAAAAAGAACCC
TTTAAATACATCTAATGTAGAAGTTAAAC	TTATATCTATGCATTTGCAAAACCTCCATTTCCTGTTG
TTTAAATACATATAATATATAAGTTAAAC	TATTCCTTTTTATTTCTTTTTATAAAAATTATTATG
TTTAAATACATCTAATGTAGAAGTTAAAC	TATTTAATTCTTTAATTACCTTTTTCTGTTCTTTACA
TTTAAATACATCTAATGTAGAAGTTAAAC

>NZ_CP006909|2|1|155383-155742|PILER-CR
TTTAAATACATCTAATGTAGAAGTTAAAC	GTATCTTATTTTTAGGTAAAACCTCTCTTAAATTCTTG
TTTAAATACATATAATGTAGAAGTTAAAC	TTTTCTATTCTGCACCTCTCTTATAAAAAAAGAACCC
TTTAAATACATCTAATGTAGAAGTTAAAC	TTATATCTATGCATTTGCAAAACCTCCATTTCCTGTTG
TTTAAATACATATAATATATAAGTTAAAC	TATTCCTTTTTATTTCTTTTTATAAAAATTATTATG
TTTAAATACATCTAATGTAGAAGTTAAAC	TATTTAATTCTTTAATTACCTTTTTCTGTTCTTTACA
TTTAAATACATCTAATGTAGAAGTTAAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP006909.1\|WP_040110103.1\|164394_164658_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_012291550.1\|151242_151476_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110092.1\|149280_149466_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_032072312.1\|159555_160287_-\|CRISPR-associated-endoribonuclease-Cas6	cas6	cd09652_cas6_CAS-I:CAS-III	gnl\|CDD\|187783
NZ_CP006909.1\|WP_040110100.1\|160690_161275_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_003401881.1\|148700_148841_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110091.1\|148862_149255_+\|LemA-family-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_033066578.1\|157663_159529_-\|hypothetical-protein	cas8b1	mkCas0106_cas8b1_CAS-I-B	unknown
NZ_CP006909.1\|WP_040110099.1\|155823_156585_-\|type-I-B-CRISPR-associated-protein-Cas5	cas5	cls001430_cas5_CAS-I-B	gnl\|CDD\|131641
NZ_CP006909.1\|WP_040110178.1\|152192_152660_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110101.1\|161368_161602_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110094.1\|150660_151107_+\|single-stranded-DNA-binding-protein	unknown	unknown	gnl\|CDD\|366099
NZ_CP006909.1\|WP_040110096.1\|153009_153237_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_040110095.1\|151494_152139_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_144311780.1\|161641_162784_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	c2c10_CAS-V-U3	-	gnl\|CDD\|223747
NZ_CP006909.1\|WP_040110097.1\|154104_154443_-\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_158383965.1\|163983_164160_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP006909.1\|WP_039698860.1\|156675_157614_-\|type-I-CRISPR-associated-protein-Cas7	cas7b	pfam05107_cas7b_CAS-I-B:CAS-I-C	gnl\|CDD\|377458
NZ_CP006909.1\|WP_040110093.1\|149546_150575_+\|C40-family-peptidase	unknown	unknown	gnl\|CDD\|366353
NZ_CP006909.1\|WP_040110102.1\|163163_163709_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|185641

Protein	Function_ID	Function_description	E-value
NZ_CP006909.1\|WP_040110102.1\|163163_163709_-\|hypothetical-protein	gnl\|CDD\|185641	PTZ00462, PTZ00462, Serine-repeat antigen protein; Provisional.	0.00139364
NZ_CP006909.1\|WP_039698860.1\|156675_157614_-\|type-I-CRISPR-associated-protein-Cas7	gnl\|CDD\|377458	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7. CRISPR-associated protein Cas7 is one of the components of the type I-B cascade-like antiviral defense complex. In Haloferax volcanii, Cas5, Cas6 and Cas7 form a small complex that aids the stability of CRISPR-derived RNA.	3.24462e-20
NZ_CP006909.1\|WP_040110099.1\|155823_156585_-\|type-I-B-CRISPR-associated-protein-Cas5	gnl\|CDD\|131641	TIGR02592, hypothetical_protein_CTC_01466, CRISPR-associated protein Cas5, subtype I-B/HMARI. This is a CRISPR-associated protein unique to the hmari subtype of cas genes and CRISPR repeat, which is the only subtype present in Haloarcula marismortui ATCC 43049. The hmari type, though uncommon, is also found in the Aquificae, Thermotogae, Firmicutes, and Dictyoglomi.	4.12745e-36
NZ_CP006909.1\|WP_032072312.1\|159555_160287_-\|CRISPR-associated-endoribonuclease-Cas6	gnl\|CDD\|187783	cd09652, Cas6-I-III, CRISPR/Cas system-associated RAMP superfamily protein Cas6. CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Cas6 is an endoribonuclease that generates crRNAs, predicted subunit of Cascade complex; RAMP superfamily protein; Possesses double RRM/ferredoxin fold.	2.62223e-10
NZ_CP006909.1\|WP_144311780.1\|161641_162784_+\|IS200/IS605-family-element-transposase-accessory-protein-TnpB	gnl\|CDD\|223747	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair].	1.4672e-25
NZ_CP006909.1\|WP_040110094.1\|150660_151107_+\|single-stranded-DNA-binding-protein	gnl\|CDD\|366099	pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.	5.39924e-46
NZ_CP006909.1\|WP_040110093.1\|149546_150575_+\|C40-family-peptidase	gnl\|CDD\|366353	pfam00877, NLPC_P60, NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.	2.83347e-40

>NZ_CP006909.1|WP_040110097.1|154104_154443_-|hypothetical-protein
MYLKSISLNIKREREGVKMKKKSIDRACYVSILPDLYINEPSDGLILIDKISKIHYELATDTPCDRSDLTCLNIDYQNSNLNILMEIKENLSFTHIVRDSHGFIFAVEIVDL
>NZ_CP006909.1|WP_040110096.1|153009_153237_+|hypothetical-protein
MSNMSYCRFQNTVEDLEECLNALTDREELSIRENNAAKRMLKNITEWIRAECIVDGDGEIDYEEIELIINQCKEK
>NZ_CP006909.1|WP_040110178.1|152192_152660_-|hypothetical-protein
MFIVKNYVNHVIFICIAVEILSLIILVSRKCSIENIILLYILPFILVLFITILNNFKDSNKSNIDDKYELIDNLDLYHSKNQFIQKKEINNEIIYCFSYIDREQNISTEIIKENTENHVIVKKINHYKAYVEIYKNIYDKKNVYIIYLPKRLALT
>NZ_CP006909.1|WP_040110095.1|151494_152139_+|hypothetical-protein
MMLNINKKLMNLPDDKKEKVKKIINNNSYTKQIFNLINIMLEKELTQEQMRKFAKLNLLILKRQSKLCIEEYKMYFSIKKQFPVKFNEDNIGYENNIRSSIDLNMYISDTVKTICIVGAALSSQIDEIQEKNIISEHELCQILSLNYILWTKNKKKVERKMENPKWSDIMYIYDCETVYNRKTATDKGFWNTSPIYTALTECKFKNDLCCSKKQ
>NZ_CP006909.1|WP_012291550.1|151242_151476_+|hypothetical-protein
MNLNKQITKHLIEMDYNNINNFKKDIIGNKEIDIIKKIDIISTLNAAIAVINESKGINNIDNDNLINIKDDFKFAFI
>NZ_CP006909.1|WP_040110094.1|150660_151107_+|single-stranded-DNA-binding-protein
MNKVVLIGRLTKDPELKFTPGNGTAVANFTLAVDRRFSKDGQREADFIPIVVWGKQAESTANYMSKGKLMGVSGRIQTRSYEAKDGTKRYITEVIAEEVKFLEWGDKATTDSSYNNGSESSYQSGQNFGNGNSFDDDIIPVDDGDIPF
>NZ_CP006909.1|WP_040110093.1|149546_150575_+|C40-family-peptidase
MIKNKLKIILCSAIIGGSIIGFYHPIVNAAPTEKDLTIEIQKLDNDLSNLTIKLNDNKDKNSKLINEIKQNEKFIQNKKEEIKETENMLNAQMRDYYIENDNNSNNALVLLLSSENMSDFLNKAKIMKIVLEEGNTTIKTLEKDKQDIIKTNEKLSKDKKEIEKNTSSIKNDFKSLGDKKKELKVKLEELNKAKINNASNTNSIIAQQNHAEYNDFLKTGSVVNSKNDIGNSVVNLATKFLGVPYVWGGTTPQGFDCSGLVLYCYNAYGISLPRISQEQQQVGIDVPLSQAKAGDLVFFHGYPATHVGIYMGNGYYIHAPHTGDVVKISPLGDYTNIKRIMS
>NZ_CP006909.1|WP_040110092.1|149280_149466_-|hypothetical-protein
MEEIFKIIYLLPFDSSSSEGYSKSTTVENATDKLKLYLSNKYNIDFADIAILSCTPIQIIQ
>NZ_CP006909.1|WP_040110091.1|148862_149255_+|LemA-family-protein
MYSVLLMIIFSLYIIHTLLQYLENHKCKKQKQLESIYQKRNAIIPILISIAESTIYDNKVIQSELNHLKDNLNDLRINDNDLMVVNYNISTSLDNFIICSSNTPELKENIEFMKLVLEIEEAEADIKRLK
>NZ_CP006909.1|WP_003401881.1|148700_148841_+|hypothetical-protein
MIIKNQKSKSKTKKFFKKYANKRVRQYPYQYTIQGNNYKKLLYCHL
>NZ_CP006909.1|WP_040110099.1|155823_156585_-|type-I-B-CRISPR-associated-protein-Cas5
MEAIKFNLSGPTAFFKKPDVNSYAYFTYNNIHKIALLGILGSIIGLKGYNQQKSIDTYPEFYDKLKTLKISIVPKSKTGYFTKKFQTFTNNTGFYNIDINKRPCTLVYREQWLENVSWDIYILLDENSVDKKILNKLKDYLLNKKCHFIPYLGKNDHTADITNVELINLKAIQAHEKLIRIQSLFLTDNFNITGEKHSPNERLIILKEMLPTELDEFDNSYRFSNLSFTNLIVQPNTSKTLIYQDSLSNLYFF
>NZ_CP006909.1|WP_039698860.1|156675_157614_-|type-I-CRISPR-associated-protein-Cas7
MNKKVYGLLGVTAVRSNYNADFSSHPRTSATGEFIATDKTFKYACRKYWTLDKEKVLAFSNLNDNLNPMTLQEKYEYLFNTTIDKKTTKPIDVLSNLFSCLDVLNFGATFAISKLNFSINGAVQIQQGKNVYEYAKAEKLSLLTPYRNPKDKDDGSEKGRTTTAEQHILDRAEFIYPFSINPENYDEYVGLVPNFNGYTEDAYIKFKEAARVGVTSLNTCSKAGCENNFALFIELKDSSKAYLPNLSSYLKYDFDSINIFDLTNIFTELLEEIKEEVEKVEVYYNKYLSDIVIPNTDIKVERRNILTGKEMI
>NZ_CP006909.1|WP_033066578.1|157663_159529_-|hypothetical-protein
MIIDMMHNFKHLYDENGDNLIVDNYPLKQGVYIIVNDRGIRDFMVIKDKEAIPKDKEELFKYLRHRDYLSILKQYDTNKAVSGRAKSIHSNNFLSLFIRENKSSHILEGSSLNPSLEQQVGWYFDQFKKWQEEERQAHNNNDPSNPQEFILTTLEDFDEQLFNKSKKAILNSLSNLPELLSEYTLADKDYIRIFYEMPIEYYNKEYKRYMIRKIFNKNVYHIFKDNNVYGISDIDLTTNNNKPSLLLYSMKTRVPLRLDFDTLLIAQKLFDFLYFYKVPKYNKESKALEYVNSIYKTLYIPMDFNIDNLDLNKYTNTGQPVYYITTGNGQSFNVINYDIIYPFDSNIDFSFNDYLSLDEDVYENDEDNISDTSNISNIKTLLDLERIVDKYFFNFNLVSNYHSDKFINNKKYTLPNNISCMLFSSKHLFHDWFRKGIDLDIIDPITNVMDNLISLWANDPDISLIKIKNMLNLRWSILDYLYEREGYAPMEVKEHFEAIHYNLKEKIHDKSLEEKYINNTEEFYYACGQLIYYLLTQNKKTLKKQQSTSKFLQCRNSSTLKIEILKLYEEVANNISTYNYRFNNLYSMVSTYNDSNDTKDYIDYLLGGLYQKSIIYEKKKQ
>NZ_CP006909.1|WP_032072312.1|159555_160287_-|CRISPR-associated-endoribonuclease-Cas6
MRTIVFFSTVIDMLSYYELLLEIKLNKDIHFSKSYEMLSKFFNRVMLTDNYLKTLHERKGVKLYSFSGLYPAATNQIYKRNALYKIRIRSFDPEFICAMQFSLSQIQDNDINIISIKFIKNQQQFITELVSINPVIFSIWEKQNYWQIGDNIDLLGKQLTNNLLHKYNTISCNKLTAQDTIFHCLNITNNKTIYIPYKKGLLLGNKLKIQVKEDDISQTLATVALGAGIGEKNSIGMGFCYGH
>NZ_CP006909.1|WP_040110100.1|160690_161275_+|hypothetical-protein
MINMELVNMVNKKNSLYTEDYLKLDPAIEPLVNYINNYFPTVASCSSHKNRKGKYIGNAYVLFYLSKKDIKQYFDLKQKLEYKGCLYNVVLNLYCVENGNITEKYSFIKNQETKYLGCVLEIKPKFSFLNREKLFMAYYKECNIPFLEEKINITLERENYKNTINPSFSVYKYIEKEPNIVKEYKKQKFNSIMH
>NZ_CP006909.1|WP_040110101.1|161368_161602_+|hypothetical-protein
MKSRDFCKHCGEKLVVRSKEDKDSNNIIFFKGCPICGYSIRADISEVSAMESFNSEKEYYNTINSIALIRNTTNFKL
>NZ_CP006909.1|WP_144311780.1|161641_162784_+|IS200/IS605-family-element-transposase-accessory-protein-TnpB
MKGVDIIEITITSKIQIYPTNEQIEILNNTMFQVRKALNYISKYIFNNNCLNQKKINEDTYYYSRETYGLKSQMAQSCIKTAIAKYKTNKSNGHDFTLVQFKNLEYDIVWNRDYSIKNGIFSINSLQGRLKIPYETKGMEKYFDGSYSFGTAKLVFKFNKCFLHIPMTKDYLQTTPFKINKIVGIDLGINFLATIYDSYGKTTFYNGKHIKAKRGHYKILRKQLQKCGSKSAKRKIKSIGSRENRYVNDINHTITKALVDKYGINTLFVLEDLTNVRTATEKVNINNRYVSVSWAFYQFRQLLEYKAKMNKSIVISVNPKYTSQTCPKCGYIEKTNRDKKKHIFKCKNCNYQSNDDRIGAINLWRKGLEYIEQSSKEHSE
>NZ_CP006909.1|WP_040110102.1|163163_163709_-|hypothetical-protein
MLLIFKKTFNQKIQELKCIIENLNHENIKLKEENIKLREENKKLDNDLLKITEKERKLNSLFLDFILGNNDNFRKEQKDIIIKSDILTLNDVLKESGNYNISETFWFIDLTNPNNKLEICYYIDSENESWYSAERIIVYKENVKVQSIYTGQLQENVNAYEIIKKHLNSNFYCKITTKKFE
>NZ_CP006909.1|WP_158383965.1|163983_164160_+|hypothetical-protein
MNKRKVRYKNGEWQDFWFKGKRNPCGCGSNIFHEELLINGKVIGVCNACNEDIYKDNG
>NZ_CP006909.1|WP_040110103.1|164394_164658_+|hypothetical-protein
MSKFTYRIEFGLEMEDDKPILTCTCGHRYEITPNLFGRSEELFRCPHCNKLWHLERNRENKTILLINPKISCGIYLKKKDNKWIYAC

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Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP006909_1	1.1\|153452\|40\|NZ_CP006909\|CRISPRCasFinder	153452-153491	40	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153452-153491	0	1.0
NZ_CP006909_1	1.2\|153517\|42\|NZ_CP006909\|CRISPRCasFinder	153517-153558	42	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153517-153558	0	1.0
NZ_CP006909_1	1.3\|153584\|28\|NZ_CP006909\|CRISPRCasFinder	153584-153611	28	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208775-208802	0	1.0
NZ_CP006909_1	1.3\|153584\|28\|NZ_CP006909\|CRISPRCasFinder	153584-153611	28	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131606-131633	0	1.0
NZ_CP006909_1	1.3\|153584\|28\|NZ_CP006909\|CRISPRCasFinder	153584-153611	28	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	70583-70610	0	1.0
NZ_CP006909_1	1.3\|153584\|28\|NZ_CP006909\|CRISPRCasFinder	153584-153611	28	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153584-153611	0	1.0
NZ_CP006909_1	1.3\|153584\|28\|NZ_CP006909\|CRISPRCasFinder	153584-153611	28	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44020-44047	0	1.0
NZ_CP006909_1	1.3\|153584\|28\|NZ_CP006909\|CRISPRCasFinder	153584-153611	28	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28882-28909	0	1.0
NZ_CP006909_1	1.4\|153637\|40\|NZ_CP006909\|CRISPRCasFinder	153637-153676	40	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153637-153676	0	1.0
NZ_CP006909_1	1.5\|153702\|41\|NZ_CP006909\|CRISPRCasFinder	153702-153742	41	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153702-153742	0	1.0
NZ_CP006909_1	1.5\|153702\|41\|NZ_CP006909\|CRISPRCasFinder	153702-153742	41	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27829-27869	0	1.0
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153768-153805	0	1.0
NZ_CP006909_1	1.7\|153831\|41\|NZ_CP006909\|CRISPRCasFinder	153831-153871	41	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153831-153871	0	1.0
NZ_CP006909_1	1.8\|153897\|39\|NZ_CP006909\|CRISPRCasFinder	153897-153935	39	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	132000-132038	0	1.0
NZ_CP006909_1	1.8\|153897\|39\|NZ_CP006909\|CRISPRCasFinder	153897-153935	39	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153897-153935	0	1.0
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153961-153989	0	1.0
NZ_CP006909_1	1.10\|154015\|50\|NZ_CP006909\|CRISPRCasFinder	154015-154064	50	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154015-154064	0	1.0
NZ_CP006909_1	1.11\|153446\|46\|NZ_CP006909\|CRT	153446-153491	46	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153446-153491	0	1.0
NZ_CP006909_1	1.12\|153511\|48\|NZ_CP006909\|CRT	153511-153558	48	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153511-153558	0	1.0
NZ_CP006909_1	1.13\|153578\|34\|NZ_CP006909\|CRT	153578-153611	34	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208775-208808	0	1.0
NZ_CP006909_1	1.13\|153578\|34\|NZ_CP006909\|CRT	153578-153611	34	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	70577-70610	0	1.0
NZ_CP006909_1	1.13\|153578\|34\|NZ_CP006909\|CRT	153578-153611	34	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153578-153611	0	1.0
NZ_CP006909_1	1.14\|153631\|46\|NZ_CP006909\|CRT	153631-153676	46	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153631-153676	0	1.0
NZ_CP006909_1	1.15\|153696\|47\|NZ_CP006909\|CRT	153696-153742	47	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153696-153742	0	1.0
NZ_CP006909_1	1.15\|153696\|47\|NZ_CP006909\|CRT	153696-153742	47	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27823-27869	0	1.0
NZ_CP006909_1	1.16\|153762\|44\|NZ_CP006909\|CRT	153762-153805	44	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153762-153805	0	1.0
NZ_CP006909_1	1.17\|153825\|47\|NZ_CP006909\|CRT	153825-153871	47	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153825-153871	0	1.0
NZ_CP006909_1	1.18\|153891\|45\|NZ_CP006909\|CRT	153891-153935	45	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153891-153935	0	1.0
NZ_CP006909_1	1.19\|153955\|35\|NZ_CP006909\|CRT	153955-153989	35	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153955-153989	0	1.0
NZ_CP006909_1	1.20\|154009\|56\|NZ_CP006909\|CRT	154009-154064	56	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154009-154064	0	1.0
NZ_CP006909_2	2.1\|154825\|32\|NZ_CP006909\|CRT	154825-154856	32	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154825-154856	0	1.0
NZ_CP006909_2	2.2\|154886\|36\|NZ_CP006909\|CRT	154886-154921	36	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154886-154921	0	1.0
NZ_CP006909_2	2.2\|154886\|36\|NZ_CP006909\|CRT	154886-154921	36	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27398-27433	0	1.0
NZ_CP006909_2	2.3\|154951\|37\|NZ_CP006909\|CRT,CRISPRCasFinder	154951-154987	37	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154951-154987	0	1.0
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155017-155047	0	1.0
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130510-130540	0	1.0
NZ_CP006909_2	2.5\|155077\|33\|NZ_CP006909\|CRT,CRISPRCasFinder	155077-155109	33	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155077-155109	0	1.0
NZ_CP006909_2	2.5\|155077\|33\|NZ_CP006909\|CRT,CRISPRCasFinder	155077-155109	33	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	43572-43604	0	1.0
NZ_CP006909_2	2.5\|155077\|33\|NZ_CP006909\|CRT,CRISPRCasFinder	155077-155109	33	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130448-130480	0	1.0
NZ_CP006909_2	2.6\|155139\|38\|NZ_CP006909\|CRT,CRISPRCasFinder	155139-155176	38	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155139-155176	0	1.0
NZ_CP006909_2	2.7\|155206\|36\|NZ_CP006909\|CRT,CRISPRCasFinder	155206-155241	36	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155206-155241	0	1.0
NZ_CP006909_2	2.8\|155271\|46\|NZ_CP006909\|CRT,CRISPRCasFinder	155271-155316	46	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155271-155316	0	1.0
NZ_CP006909_2	2.9\|155346\|37\|NZ_CP006909\|CRT,CRISPRCasFinder	155346-155382	37	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155346-155382	0	1.0
NZ_CP006909_2	2.10\|155412\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155412-155449	38	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155412-155449	0	1.0
NZ_CP006909_2	2.10\|155412\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155412-155449	38	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130317-130354	0	1.0
NZ_CP006909_2	2.11\|155479\|37\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155479-155515	37	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155479-155515	0	1.0
NZ_CP006909_2	2.12\|155545\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155545-155582	38	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	207863-207900	0	1.0
NZ_CP006909_2	2.12\|155545\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155545-155582	38	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148397-148434	0	1.0
NZ_CP006909_2	2.12\|155545\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155545-155582	38	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71485-71522	0	1.0
NZ_CP006909_2	2.12\|155545\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155545-155582	38	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155545-155582	0	1.0
NZ_CP006909_2	2.12\|155545\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155545-155582	38	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29392-29429	0	1.0
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155612-155647	0	1.0
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29459-29494	0	1.0
NZ_CP006909_2	2.14\|155677\|37\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155677-155713	37	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155677-155713	0	1.0
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	677-714	1	0.974
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27895-27932	1	0.974
NZ_CP006909_1	1.7\|153831\|41\|NZ_CP006909\|CRISPRCasFinder	153831-153871	41	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44181-44221	1	0.976
NZ_CP006909_1	1.7\|153831\|41\|NZ_CP006909\|CRISPRCasFinder	153831-153871	41	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27958-27998	1	0.976
NZ_CP006909_1	1.7\|153831\|41\|NZ_CP006909\|CRISPRCasFinder	153831-153871	41	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	611-651	1	0.976
NZ_CP006909_1	1.13\|153578\|34\|NZ_CP006909\|CRT	153578-153611	34	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	131606-131639	1	0.971
NZ_CP006909_1	1.13\|153578\|34\|NZ_CP006909\|CRT	153578-153611	34	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44014-44047	1	0.971
NZ_CP006909_1	1.13\|153578\|34\|NZ_CP006909\|CRT	153578-153611	34	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28876-28909	1	0.971
NZ_CP006909_1	1.16\|153762\|44\|NZ_CP006909\|CRT	153762-153805	44	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	677-720	1	0.977
NZ_CP006909_1	1.16\|153762\|44\|NZ_CP006909\|CRT	153762-153805	44	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27889-27932	1	0.977
NZ_CP006909_1	1.17\|153825\|47\|NZ_CP006909\|CRT	153825-153871	47	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44175-44221	1	0.979
NZ_CP006909_1	1.17\|153825\|47\|NZ_CP006909\|CRT	153825-153871	47	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	611-657	1	0.979
NZ_CP006909_1	1.17\|153825\|47\|NZ_CP006909\|CRT	153825-153871	47	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27952-27998	1	0.979
NZ_CP006909_2	2.1\|154825\|32\|NZ_CP006909\|CRT	154825-154856	32	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	27652-27683	1	0.969
NZ_CP006909_2	2.3\|154951\|37\|NZ_CP006909\|CRT,CRISPRCasFinder	154951-154987	37	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	208485-208521	1	0.973
NZ_CP006909_2	2.3\|154951\|37\|NZ_CP006909\|CRT,CRISPRCasFinder	154951-154987	37	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	250-286	1	0.973
NZ_CP006909_2	2.3\|154951\|37\|NZ_CP006909\|CRT,CRISPRCasFinder	154951-154987	37	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	70864-70900	1	0.973
NZ_CP006909_2	2.3\|154951\|37\|NZ_CP006909\|CRT,CRISPRCasFinder	154951-154987	37	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28390-28426	1	0.973
NZ_CP006909_2	2.5\|155077\|33\|NZ_CP006909\|CRT,CRISPRCasFinder	155077-155109	33	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131752-131784	1	0.97
NZ_CP006909_2	2.5\|155077\|33\|NZ_CP006909\|CRT,CRISPRCasFinder	155077-155109	33	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71423-71455	1	0.97
NZ_CP006909_2	2.5\|155077\|33\|NZ_CP006909\|CRT,CRISPRCasFinder	155077-155109	33	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	207930-207962	1	0.97
NZ_CP006909_2	2.5\|155077\|33\|NZ_CP006909\|CRT,CRISPRCasFinder	155077-155109	33	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148464-148496	1	0.97
NZ_CP006909_2	2.7\|155206\|36\|NZ_CP006909\|CRT,CRISPRCasFinder	155206-155241	36	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	132089-132124	1	0.972
NZ_CP006909_2	2.11\|155479\|37\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155479-155515	37	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29260-29296	1	0.973
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NZ_CP014152	Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence	71947-71982	1	0.972
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NZ_CP013710	Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence	207403-207438	1	0.972
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148003-148038	1	0.972
NZ_CP006909_1	1.2\|153517\|42\|NZ_CP006909\|CRISPRCasFinder	153517-153558	42	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	130769-130810	2	0.952
NZ_CP006909_1	1.12\|153511\|48\|NZ_CP006909\|CRT	153511-153558	48	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	130769-130816	2	0.958
NZ_CP006909_2	2.2\|154886\|36\|NZ_CP006909\|CRT	154886-154921	36	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	131513-131548	2	0.944
NZ_CP006909_2	2.3\|154951\|37\|NZ_CP006909\|CRT,CRISPRCasFinder	154951-154987	37	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	43892-43928	2	0.946
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	132986-133016	2	0.935
NZ_CP006909_2	2.10\|155412\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155412-155449	38	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29193-29230	2	0.947
NZ_CP006909_2	2.12\|155545\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155545-155582	38	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	43634-43671	2	0.947
NZ_CP006909_2	2.14\|155677\|37\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155677-155713	37	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	147938-147974	2	0.946
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	45050-45087	3	0.921
NZ_CP006909_1	1.18\|153891\|45\|NZ_CP006909\|CRT	153891-153935	45	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	132000-132044	3	0.933
NZ_CP006909_1	1.4\|153637\|40\|NZ_CP006909\|CRISPRCasFinder	153637-153676	40	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155475-155514	4	0.9
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NC_010418	Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence	130139-130176	4	0.895
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KM583822	Helicobacter pylori strain UM352 plasmid pUM352, complete sequence	2854-2882	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KM583823	Helicobacter pylori strain UM426 plasmid pUM426, complete sequence	2854-2882	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KM583818	Helicobacter pylori strain UM171 plasmid pUM171, complete sequence	2907-2935	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KM583809	Helicobacter pylori strain UM046 plasmid pUM046-2, complete sequence	2853-2881	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KM583819	Helicobacter pylori strain UM196 plasmid pUM196, complete sequence	2877-2905	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KM583816	Helicobacter pylori strain UM146 plasmid pUM146, complete sequence	3670-3698	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KM583812	Helicobacter pylori strain UM096 plasmid pUM096, complete sequence	2928-2956	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_017369	Helicobacter pylori F30 plasmid pHPF30, complete sequence	897-925	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP031559	Helicobacter pylori strain GD63 plasmid pHPGD63, complete sequence	5671-5699	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_010884	Helicobacter pylori strain 69 plasmid pHP69, complete sequence	3308-3336	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_001476	Helicobacter pylori plasmid pHPM186, complete sequence	8380-8408	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP053257	Helicobacter pylori A45 plasmid unnamed, complete sequence	2840-2868	4	0.862
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_011334	Helicobacter pylori G27 plasmid pHPG27, complete sequence	4061-4089	4	0.862
NZ_CP006909_1	1.14\|153631\|46\|NZ_CP006909\|CRT	153631-153676	46	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	155469-155514	4	0.913
NZ_CP006909_1	1.1\|153452\|40\|NZ_CP006909\|CRISPRCasFinder	153452-153491	40	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148641-148680	5	0.875
NZ_CP006909_1	1.2\|153517\|42\|NZ_CP006909\|CRISPRCasFinder	153517-153558	42	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154755-154796	5	0.881
NZ_CP006909_1	1.4\|153637\|40\|NZ_CP006909\|CRISPRCasFinder	153637-153676	40	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29256-29295	5	0.875
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	CP024688	Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-4-144K, complete sequence	106702-106730	5	0.828
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_005917	Helicobacter pylori plasmid pAL202, complete sequence	5101-5129	5	0.828
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_004950	Helicobacter pylori plasmid pHel4 complete sequence	392-420	5	0.828
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_017383	Helicobacter pylori v225d plasmid pHPv225d, complete sequence	2117-2145	5	0.828
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_011499	Helicobacter pylori P12 plasmid HPP12, complete sequence	397-425	5	0.828
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_017373	Helicobacter pylori SouthAfrica7 plasmid, complete sequence	6679-6707	5	0.828
NZ_CP006909_1	1.11\|153446\|46\|NZ_CP006909\|CRT	153446-153491	46	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148641-148686	5	0.891
NZ_CP006909_1	1.12\|153511\|48\|NZ_CP006909\|CRT	153511-153558	48	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	154749-154796	5	0.896
NZ_CP006909_1	1.14\|153631\|46\|NZ_CP006909\|CRT	153631-153676	46	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	29250-29295	5	0.891
NZ_CP006909_2	2.11\|155479\|37\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155479-155515	37	NZ_CP006909	Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence	153641-153677	5	0.865
NZ_CP006909_2	2.14\|155677\|37\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155677-155713	37	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	132290-132326	5	0.865
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP017256	Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence	81329-81357	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_015418	Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence	18980-19008	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KT186230	Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence	61961-61989	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KJ776578	Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence	10732-10760	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KJ776581	Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence	10732-10760	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_KJ776580	Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence	15543-15571	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP022045	Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence	180439-180467	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_007322	Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence	61896-61924	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_012579	Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence	62203-62231	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP015777	Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence	61896-61924	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP018904	Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence	62000-62028	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP023002	Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence	144099-144127	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_AP019732	Bacillus anthracis strain PCr plasmid PCr-pXO1	138707-138735	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_AP018444	Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence	61980-62008	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP004365	Komagataeibacter xylinus E25 plasmid pGX5, complete sequence	183383-183411	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP029324	Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence	162161-162189	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_012656	Bacillus anthracis str. A0248 plasmid pXO1, complete sequence	62160-62188	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_010934	Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence	120003-120031	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP019589	Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence	61896-61924	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP010853	Bacillus anthracis strain A1144 plasmid pXO1, complete sequence	61865-61893	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP007665	Bacillus anthracis str. Vollum plasmid unnamed, complete sequence	140030-140058	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP008847	Bacillus anthracis strain HYU01 plasmid pX01, complete sequence	61982-62010	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP006743	Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence	61885-61913	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_AP014834	Bacillus anthracis strain Shikan-NIID plasmid pXO1	61980-62008	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP029806	Bacillus anthracis strain London_499 plasmid pX01, complete sequence	60883-60911	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_001496	Bacillus anthracis virulence plasmid PX01, complete sequence	61845-61873	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_017726	Bacillus anthracis str. H9401 plasmid BAP1, complete sequence	61966-61994	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP014177	Bacillus anthracis strain Stendal plasmid pXO1, complete sequence	61896-61924	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009597	Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence	35563-35591	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009901	Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence	32805-32833	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009340	Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence	15033-15061	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009696	Bacillus anthracis strain RA3 plasmid pXO1, complete sequence	135245-135273	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009699	Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence	144151-144179	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009592	Bacillus cereus G9241 plasmid pBCX01, complete sequence	1373-1401	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_AP017916	Candidatus Azobacteroides pseudotrichonymphae plasmid pAPPJ2 DNA, complete sequence, phylotype ProJPt-1	13804-13832	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009543	Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence	148482-148510	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP010321	Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence	130068-130096	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009540	Bacillus anthracis str. Sterne plasmid pXO1, complete sequence	113528-113556	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009330	Bacillus anthracis strain K3 plasmid 1, complete sequence	99772-99800	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009324	Bacillus anthracis strain PAK-1 plasmid 1, complete sequence	138173-138201	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009327	Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence	105697-105725	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP001975	Bacillus anthracis str. A16R plasmid pXO1, complete sequence	61981-62009	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP009980	Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence	45842-45870	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP001971	Bacillus anthracis str. A16 plasmid pXO1, complete sequence	61981-62009	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_013940	Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence	266980-267008	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_017232	Borreliella afzelii PKo plasmid lp17, complete sequence	19721-19749	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP047132	Bacillus anthracis str. BF1 plasmid pXO1, complete sequence	161281-161309	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250021	Prevotella phage Lak-B2, complete genome	486970-486998	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250024	Prevotella phage Lak-B5, complete genome	480152-480180	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250028	Prevotella phage Lak-B9, complete genome	484583-484611	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250023	Prevotella phage Lak-B4, complete genome	486201-486229	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250025	Prevotella phage Lak-B6, complete genome	483245-483273	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	KU052488	Lactobacillus phage SA-C12, complete genome	40891-40919	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250022	Prevotella phage Lak-B3, complete genome	483335-483363	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250027	Prevotella phage Lak-B8, complete genome	486732-486760	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_029119	Staphylococcus phage SPbeta-like, complete genome	74686-74714	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250026	Prevotella phage Lak-B7, complete genome	485769-485797	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_047897	Lactobacillus phage Lenus, complete genome	3878-3906	6	0.793
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MK250020	Prevotella phage Lak-B1, complete genome	484566-484594	6	0.793
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NZ_CP013684	Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence	44128-44158	6	0.806
NZ_CP006909_1	1.8\|153897\|39\|NZ_CP006909\|CRISPRCasFinder	153897-153935	39	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28576-28614	7	0.821
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP039706	Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence	97383-97411	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP033246	Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence	624361-624389	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP033248	Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence	624376-624404	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP013238	Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence	709711-709739	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_AP019717	Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence	100607-100635	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP015884	Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence	122287-122315	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP020413	Leptospira interrogans serovar Copenhageni strain FDAARGOS_203 plasmid unnamed1, complete sequence	190374-190402	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NZ_CP041297	Acinetobacter indicus strain 80-1-2 plasmid p80-1-2-tetX3, complete sequence	50149-50177	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	NC_004845	Helicobacter pylori plasmid pHPM8, complete sequence	3734-3762	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MF547662	Clostridioides phage LIBA6276, complete genome	78287-78315	7	0.759
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MF547663	Clostridioides phage LIBA2945, complete genome	77010-77038	7	0.759
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NC_018265	Melissococcus plutonius DAT561 plasmid 1, complete sequence	67652-67682	7	0.774
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NZ_CP006684	Melissococcus plutonius S1 plasmid pMEPL_178, complete sequence	116083-116113	7	0.774
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NZ_AP021886	Melissococcus plutonius strain DAT1033 plasmid pMP1, complete sequence	116082-116112	7	0.774
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NZ_AP018525	Melissococcus plutonius strain DAT585 plasmid pMP1, complete sequence	115915-115945	7	0.774
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	MN693165	Marine virus AFVG_25M308, complete genome	39808-39838	7	0.774
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MN693664	Marine virus AFVG_250M619, complete genome	34728-34756	8	0.724
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NZ_CP013700	Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence	132029-132059	8	0.742
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	AP014119	Uncultured Mediterranean phage uvMED isolate uvMED-GF-C36-MedDCM-OCT-S41-C69, * SEQUENCING IN PROGRESS *	8787-8817	8	0.742
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NZ_LR214986	Mycoplasma cynos strain NCTC10142 plasmid 13	772816-772851	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013508	Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C15J-MedDCM-OCT-S37-C55	26369-26404	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013868	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S36-C128, * SEQUENCING IN PROGRESS *	4409-4444	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013873	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S40-C136, * SEQUENCING IN PROGRESS *	10561-10596	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013864	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S26-C75, * SEQUENCING IN PROGRESS *	26371-26406	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013867	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S34-C62, * SEQUENCING IN PROGRESS *	27227-27262	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013875	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S45-C106, * SEQUENCING IN PROGRESS *	4361-4396	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013870	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S38-C53, * SEQUENCING IN PROGRESS *	34221-34256	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013865	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S32-C115, * SEQUENCING IN PROGRESS *	7810-7845	8	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	AP013872	Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S39-C133, * SEQUENCING IN PROGRESS *	10875-10910	8	0.778
NZ_CP006909_1	1.9\|153961\|29\|NZ_CP006909\|CRISPRCasFinder	153961-153989	29	MH884508	Bacillus phage vB_BcoS-136, complete genome	40205-40233	9	0.69
NZ_CP006909_2	2.1\|154825\|32\|NZ_CP006909\|CRT	154825-154856	32	NZ_CP020558	Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence	18239-18270	9	0.719
NZ_CP006909_2	2.4\|155017\|31\|NZ_CP006909\|CRT,CRISPRCasFinder	155017-155047	31	NZ_CP015352	Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence	1698-1728	9	0.71
NZ_CP006909_2	2.12\|155545\|38\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155545-155582	38	NC_010379	Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence	148639-148676	9	0.763
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NZ_CP040783	Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence	220831-220866	9	0.75
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NZ_CP018750	Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence	12753-12790	10	0.737
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NZ_CP028867	Borreliella garinii strain 20047 plasmid cp26, complete sequence	13019-13056	10	0.737
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NZ_CP015797	Borrelia mayonii strain MN14-1539 plasmid cp26, complete sequence	9099-9136	10	0.737
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NZ_CP015781	Borrelia mayonii strain MN14-1420 plasmid cp26, complete sequence	9099-9136	10	0.737
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NC_017725	Borreliella garinii BgVir plasmid cp26, complete sequence	9026-9063	10	0.737
NZ_CP006909_1	1.18\|153891\|45\|NZ_CP006909\|CRT	153891-153935	45	NC_025146	Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111	28570-28614	10	0.778
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NZ_CP014283	Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence	394045-394080	10	0.722
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NZ_CP032614	Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence	83181-83216	10	0.722
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NZ_CP011156	Bacillus cereus strain HN001 plasmid pRML01, complete sequence	270757-270792	10	0.722
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	JN638751	Bacillus phage G, complete genome	45881-45916	10	0.722
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NC_018983	Borrelia burgdorferi 297 plasmid 297_cp26, complete sequence	9156-9193	11	0.711
NZ_CP006909_1	1.6\|153768\|38\|NZ_CP006909\|CRISPRCasFinder	153768-153805	38	NC_017395	Borreliella burgdorferi JD1 plasmid JD1 cp26, complete sequence	9161-9198	11	0.711
NZ_CP006909_2	2.13\|155612\|36\|NZ_CP006909\|CRT,CRISPRCasFinder,PILER-CR	155612-155647	36	NC_014389	Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence	302425-302460	11	0.694

1. spacer 1.1|153452|40|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaacttatatttatgcatttgtaaaacctccgttcgtttg	CRISPR spacer
aaacttatatttatgcatttgtaaaacctccgttcgtttg	Protospacer
****************************************

2. spacer 1.2|153517|42|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaattatgaaaaatcttatatctttttttattttttcggtag	CRISPR spacer
aaattatgaaaaatcttatatctttttttattttttcggtag	Protospacer
******************************************

3. spacer 1.3|153584|28|NZ_CP006909|CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 0, identity: 1.0

aaactatattaggtagattattatactt	CRISPR spacer
aaactatattaggtagattattatactt	Protospacer
****************************

4. spacer 1.3|153584|28|NZ_CP006909|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 0, identity: 1.0

aaactatattaggtagattattatactt	CRISPR spacer
aaactatattaggtagattattatactt	Protospacer
****************************

5. spacer 1.3|153584|28|NZ_CP006909|CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 0, identity: 1.0

aaactatattaggtagattattatactt	CRISPR spacer
aaactatattaggtagattattatactt	Protospacer
****************************

6. spacer 1.3|153584|28|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaactatattaggtagattattatactt	CRISPR spacer
aaactatattaggtagattattatactt	Protospacer
****************************

7. spacer 1.3|153584|28|NZ_CP006909|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

aaactatattaggtagattattatactt	CRISPR spacer
aaactatattaggtagattattatactt	Protospacer
****************************

8. spacer 1.3|153584|28|NZ_CP006909|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

aaactatattaggtagattattatactt	CRISPR spacer
aaactatattaggtagattattatactt	Protospacer
****************************

9. spacer 1.4|153637|40|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaacttttctattctgcgcctctcttataaaaaagaaccc	CRISPR spacer
aaacttttctattctgcgcctctcttataaaaaagaaccc	Protospacer
****************************************

10. spacer 1.5|153702|41|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

gaaccattaaatttattaagcgaaggagtaggtataaatag	CRISPR spacer
gaaccattaaatttattaagcgaaggagtaggtataaatag	Protospacer
*****************************************

11. spacer 1.5|153702|41|NZ_CP006909|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

gaaccattaaatttattaagcgaaggagtaggtataaatag	CRISPR spacer
gaaccattaaatttattaagcgaaggagtaggtataaatag	Protospacer
*****************************************

12. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aagcttaaataaaactaaaaatttttataaatcggtag	Protospacer
**************************************

13. spacer 1.7|153831|41|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaatccatcttacttcattttccatatttcaaatatgcgtg	CRISPR spacer
aaatccatcttacttcattttccatatttcaaatatgcgtg	Protospacer
*****************************************

14. spacer 1.8|153897|39|NZ_CP006909|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

aaacttagaaaaattaaaaaacatggaggaaaatagtag	CRISPR spacer
aaacttagaaaaattaaaaaacatggaggaaaatagtag	Protospacer
***************************************

15. spacer 1.8|153897|39|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaacttagaaaaattaaaaaacatggaggaaaatagtag	CRISPR spacer
aaacttagaaaaattaaaaaacatggaggaaaatagtag	Protospacer
***************************************

16. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaactacatttttatattttataaacata	CRISPR spacer
aaactacatttttatattttataaacata	Protospacer
*****************************

17. spacer 1.10|154015|50|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aagtagaagctaaattgaaattttataataagttatgatctggcatgata	CRISPR spacer
aagtagaagctaaattgaaattttataataagttatgatctggcatgata	Protospacer
**************************************************

18. spacer 1.11|153446|46|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaagttaaacttatatttatgcatttgtaaaacctccgttcgtttg	CRISPR spacer
aaagttaaacttatatttatgcatttgtaaaacctccgttcgtttg	Protospacer
**********************************************

19. spacer 1.12|153511|48|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaaattatgaaaaatcttatatctttttttattttttcggtag	CRISPR spacer
gaagttaaattatgaaaaatcttatatctttttttattttttcggtag	Protospacer
************************************************

20. spacer 1.13|153578|34|NZ_CP006909|CRT matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaaactatattaggtagattattatactt	CRISPR spacer
gaagttaaactatattaggtagattattatactt	Protospacer
**********************************

21. spacer 1.13|153578|34|NZ_CP006909|CRT matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaaactatattaggtagattattatactt	CRISPR spacer
gaagttaaactatattaggtagattattatactt	Protospacer
**********************************

22. spacer 1.13|153578|34|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaaactatattaggtagattattatactt	CRISPR spacer
gaagttaaactatattaggtagattattatactt	Protospacer
**********************************

23. spacer 1.14|153631|46|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaaacttttctattctgcgcctctcttataaaaaagaaccc	CRISPR spacer
gaagttaaacttttctattctgcgcctctcttataaaaaagaaccc	Protospacer
**********************************************

24. spacer 1.15|153696|47|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaagttgaaccattaaatttattaagcgaaggagtaggtataaatag	CRISPR spacer
aaagttgaaccattaaatttattaagcgaaggagtaggtataaatag	Protospacer
***********************************************

25. spacer 1.15|153696|47|NZ_CP006909|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

aaagttgaaccattaaatttattaagcgaaggagtaggtataaatag	CRISPR spacer
aaagttgaaccattaaatttattaagcgaaggagtaggtataaatag	Protospacer
***********************************************

26. spacer 1.16|153762|44|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
gaagttaagcttaaataaaactaaaaatttttataaatcggtag	Protospacer
********************************************

27. spacer 1.17|153825|47|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

taagttaaatccatcttacttcattttccatatttcaaatatgcgtg	CRISPR spacer
taagttaaatccatcttacttcattttccatatttcaaatatgcgtg	Protospacer
***********************************************

28. spacer 1.18|153891|45|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

gcagttaaacttagaaaaattaaaaaacatggaggaaaatagtag	CRISPR spacer
gcagttaaacttagaaaaattaaaaaacatggaggaaaatagtag	Protospacer
*********************************************

29. spacer 1.19|153955|35|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

caagttaaactacatttttatattttataaacata	CRISPR spacer
caagttaaactacatttttatattttataaacata	Protospacer
***********************************

30. spacer 1.20|154009|56|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

gaagttaagtagaagctaaattgaaattttataataagttatgatctggcatgata	CRISPR spacer
gaagttaagtagaagctaaattgaaattttataataagttatgatctggcatgata	Protospacer
********************************************************

31. spacer 2.1|154825|32|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaagataaaaaacaattgtaagtattattaat	CRISPR spacer
aaagataaaaaacaattgtaagtattattaat	Protospacer
********************************

32. spacer 2.2|154886|36|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

ataaaaactgaaagatttttaatattcctaaacatg	CRISPR spacer
ataaaaactgaaagatttttaatattcctaaacatg	Protospacer
************************************

33. spacer 2.2|154886|36|NZ_CP006909|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

ataaaaactgaaagatttttaatattcctaaacatg	CRISPR spacer
ataaaaactgaaagatttttaatattcctaaacatg	Protospacer
************************************

34. spacer 2.3|154951|37|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

ttgttttttatagaatttagcattacaaaaacctccg	CRISPR spacer
ttgttttttatagaatttagcattacaaaaacctccg	Protospacer
*************************************

35. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

tttatttgtttttattgttactattaacacg	CRISPR spacer
tttatttgtttttattgttactattaacacg	Protospacer
*******************************

36. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

tttatttgtttttattgttactattaacacg	CRISPR spacer
tttatttgtttttattgttactattaacacg	Protospacer
*******************************

37. spacer 2.5|155077|33|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

ttccccttttcagattataaatttaatgtttcg	CRISPR spacer
ttccccttttcagattataaatttaatgtttcg	Protospacer
*********************************

38. spacer 2.5|155077|33|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 0, identity: 1.0

ttccccttttcagattataaatttaatgtttcg	CRISPR spacer
ttccccttttcagattataaatttaatgtttcg	Protospacer
*********************************

39. spacer 2.5|155077|33|NZ_CP006909|CRT,CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

ttccccttttcagattataaatttaatgtttcg	CRISPR spacer
ttccccttttcagattataaatttaatgtttcg	Protospacer
*********************************

40. spacer 2.6|155139|38|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

catccaaaactcttctctttttttgcaattgttctctg	CRISPR spacer
catccaaaactcttctctttttttgcaattgttctctg	Protospacer
**************************************

41. spacer 2.7|155206|36|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

tcagtgttgtagctaactttataatagtagttatgg	CRISPR spacer
tcagtgttgtagctaactttataatagtagttatgg	Protospacer
************************************

42. spacer 2.8|155271|46|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

aaatcatctattttatattggtaatatatttactataaatcggtag	CRISPR spacer
aaatcatctattttatattggtaatatatttactataaatcggtag	Protospacer
**********************************************

43. spacer 2.9|155346|37|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

ccaatttactccatttttcatatttcaaatatgcgtg	CRISPR spacer
ccaatttactccatttttcatatttcaaatatgcgtg	Protospacer
*************************************

44. spacer 2.10|155412|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

gtatcttatttttaggtaaaacctctcttaaattcttg	CRISPR spacer
gtatcttatttttaggtaaaacctctcttaaattcttg	Protospacer
**************************************

45. spacer 2.10|155412|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 0, identity: 1.0

gtatcttatttttaggtaaaacctctcttaaattcttg	CRISPR spacer
gtatcttatttttaggtaaaacctctcttaaattcttg	Protospacer
**************************************

46. spacer 2.11|155479|37|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

ttttctattctgcacctctcttataaaaaaagaaccc	CRISPR spacer
ttttctattctgcacctctcttataaaaaaagaaccc	Protospacer
*************************************

47. spacer 2.12|155545|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 0, identity: 1.0

ttatatctatgcatttgcaaaacctccatttcctgttg	CRISPR spacer
ttatatctatgcatttgcaaaacctccatttcctgttg	Protospacer
**************************************

48. spacer 2.12|155545|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 0, identity: 1.0

ttatatctatgcatttgcaaaacctccatttcctgttg	CRISPR spacer
ttatatctatgcatttgcaaaacctccatttcctgttg	Protospacer
**************************************

49. spacer 2.12|155545|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 0, identity: 1.0

ttatatctatgcatttgcaaaacctccatttcctgttg	CRISPR spacer
ttatatctatgcatttgcaaaacctccatttcctgttg	Protospacer
**************************************

50. spacer 2.12|155545|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

ttatatctatgcatttgcaaaacctccatttcctgttg	CRISPR spacer
ttatatctatgcatttgcaaaacctccatttcctgttg	Protospacer
**************************************

51. spacer 2.12|155545|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

ttatatctatgcatttgcaaaacctccatttcctgttg	CRISPR spacer
ttatatctatgcatttgcaaaacctccatttcctgttg	Protospacer
**************************************

52. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tattcctttttatttctttttataaaaattattatg	Protospacer
************************************

53. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 0, identity: 1.0

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tattcctttttatttctttttataaaaattattatg	Protospacer
************************************

54. spacer 2.14|155677|37|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 0, identity: 1.0

tatttaattctttaattacctttttctgttctttaca	CRISPR spacer
tatttaattctttaattacctttttctgttctttaca	Protospacer
*************************************

55. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.974

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaacttaaataaaactaaaaatttttataaatcggtag	Protospacer
**.***********************************

56. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.974

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaacttaaataaaactaaaaatttttataaatcggtag	Protospacer
**.***********************************

57. spacer 1.7|153831|41|NZ_CP006909|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.976

aaatccatcttacttcattttccatatttcaaatatgcgtg	CRISPR spacer
aaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
**************.**************************

58. spacer 1.7|153831|41|NZ_CP006909|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.976

aaatccatcttacttcattttccatatttcaaatatgcgtg	CRISPR spacer
aaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
**************.**************************

59. spacer 1.7|153831|41|NZ_CP006909|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.976

aaatccatcttacttcattttccatatttcaaatatgcgtg	CRISPR spacer
aaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
**************.**************************

60. spacer 1.13|153578|34|NZ_CP006909|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 1, identity: 0.971

gaagttaaactatattaggtagattattatactt	CRISPR spacer
taagttaaactatattaggtagattattatactt	Protospacer
 *********************************

61. spacer 1.13|153578|34|NZ_CP006909|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.971

gaagttaaactatattaggtagattattatactt	CRISPR spacer
taagttaaactatattaggtagattattatactt	Protospacer
 *********************************

62. spacer 1.13|153578|34|NZ_CP006909|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.971

gaagttaaactatattaggtagattattatactt	CRISPR spacer
taagttaaactatattaggtagattattatactt	Protospacer
 *********************************

63. spacer 1.16|153762|44|NZ_CP006909|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.977

gaagttaagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
gaagttaaacttaaataaaactaaaaatttttataaatcggtag	Protospacer
********.***********************************

64. spacer 1.16|153762|44|NZ_CP006909|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.977

gaagttaagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
gaagttaaacttaaataaaactaaaaatttttataaatcggtag	Protospacer
********.***********************************

65. spacer 1.17|153825|47|NZ_CP006909|CRT matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 1, identity: 0.979

taagttaaatccatcttacttcattttccatatttcaaatatgcgtg	CRISPR spacer
taagttaaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
********************.**************************

66. spacer 1.17|153825|47|NZ_CP006909|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.979

taagttaaatccatcttacttcattttccatatttcaaatatgcgtg	CRISPR spacer
taagttaaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
********************.**************************

67. spacer 1.17|153825|47|NZ_CP006909|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.979

taagttaaatccatcttacttcattttccatatttcaaatatgcgtg	CRISPR spacer
taagttaaatccatcttactccattttccatatttcaaatatgcgtg	Protospacer
********************.**************************

68. spacer 2.1|154825|32|NZ_CP006909|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.969

aaagataaaaaacaattgtaagtattattaat	CRISPR spacer
aaagataaaaaataattgtaagtattattaat	Protospacer
************.*******************

69. spacer 2.3|154951|37|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 1, identity: 0.973

ttgttttttatagaatttagcattacaaaaacctccg	CRISPR spacer
ttgttttttataggatttagcattacaaaaacctccg	Protospacer
*************.***********************

70. spacer 2.3|154951|37|NZ_CP006909|CRT,CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.973

ttgttttttatagaatttagcattacaaaaacctccg	CRISPR spacer
ttgttttttataggatttagcattacaaaaacctccg	Protospacer
*************.***********************

71. spacer 2.3|154951|37|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 1, identity: 0.973

ttgttttttatagaatttagcattacaaaaacctccg	CRISPR spacer
ttgttttttataggatttagcattacaaaaacctccg	Protospacer
*************.***********************

72. spacer 2.3|154951|37|NZ_CP006909|CRT,CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.973

ttgttttttatagaatttagcattacaaaaacctccg	CRISPR spacer
ttgttttttataggatttagcattacaaaaacctccg	Protospacer
*************.***********************

73. spacer 2.5|155077|33|NZ_CP006909|CRT,CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 1, identity: 0.97

ttccccttttcagattataaatttaatgtttcg-	CRISPR spacer
ttccccttttcagattataaatttaat-tttcgt	Protospacer
*************************** *****

74. spacer 2.5|155077|33|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 1, identity: 0.97

ttccccttttcagattataaatttaatgtttcg	CRISPR spacer
ttccccttttcagattataaatttaatgtttgg	Protospacer
******************************* *

75. spacer 2.5|155077|33|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 1, identity: 0.97

ttccccttttcagattataaatttaatgtttcg	CRISPR spacer
ttccccttttcagattataaatttaatgtttgg	Protospacer
******************************* *

76. spacer 2.5|155077|33|NZ_CP006909|CRT,CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.97

ttccccttttcagattataaatttaatgtttcg	CRISPR spacer
ttccccttttcagattataaatttaatgtttgg	Protospacer
******************************* *

77. spacer 2.7|155206|36|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 1, identity: 0.972

tcagtgttgtagctaactttataatagtagttatgg	CRISPR spacer
tcagtgttgtagctaactttataatagtagttatag	Protospacer
**********************************.*

78. spacer 2.11|155479|37|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 1, identity: 0.973

ttttctattctgcacctctcttataaaaaaagaaccc	CRISPR spacer
ttttctattctgcacctctcttataaaaaaagaactc	Protospacer
***********************************.*

79. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP014152 (Clostridium botulinum strain BrDura plasmid pRSJ20_1, complete sequence) position: , mismatch: 1, identity: 0.972

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tattcctttttatttctttttataaagattattatg	Protospacer
**************************.*********

80. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013710 (Clostridium botulinum strain F634 plasmid pRSJ2_3, complete sequence) position: , mismatch: 1, identity: 0.972

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tattcctttttatttctttttataaagattattatg	Protospacer
**************************.*********

81. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 1, identity: 0.972

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tattcctttttatttctttttataaagattattatg	Protospacer
**************************.*********

82. spacer 1.2|153517|42|NZ_CP006909|CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 2, identity: 0.952

aaattatgaaaaatcttatatctttttttattttttcggtag-	CRISPR spacer
aaattatgaaaaatcttatatctttttttg-tttttcggtagt	Protospacer
*****************************. ***********

83. spacer 1.12|153511|48|NZ_CP006909|CRT matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 2, identity: 0.958

gaagttaaattatgaaaaatcttatatctttttttattttttcggtag-	CRISPR spacer
gaagttaaattatgaaaaatcttatatctttttttg-tttttcggtagt	Protospacer
***********************************. ***********

84. spacer 2.2|154886|36|NZ_CP006909|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 2, identity: 0.944

ataaaaactgaaagatttttaatattcctaaacatg	CRISPR spacer
ataaaaactgaaagatttttaatattcctaagtatg	Protospacer
*******************************..***

85. spacer 2.3|154951|37|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 2, identity: 0.946

ttgttttttatagaatttagcattacaaaaacctccg	CRISPR spacer
ttgttttttataggatttagcattacaaaaacctcca	Protospacer
*************.**********************.

86. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 2, identity: 0.935

tttatttgtttttattgttactattaacacg	CRISPR spacer
tttatttgtttttattgttactattagcatg	Protospacer
**************************.**.*

87. spacer 2.10|155412|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 2, identity: 0.947

gtatcttatttttaggtaaaacctctcttaaattcttg	CRISPR spacer
gtatcttatttttagataaaacctctcttaaaatcttg	Protospacer
***************.**************** *****

88. spacer 2.12|155545|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 2, identity: 0.947

ttatatctatgcatttgcaaaacctccatttcctgttg	CRISPR spacer
ttatatctatgcatttgtaaaaccaccatttcctgttg	Protospacer
*****************.****** *************

89. spacer 2.14|155677|37|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 2, identity: 0.946

tatttaattctttaattacctttttctgttctttaca	CRISPR spacer
catttaattttttaattacctttttctgttctttaca	Protospacer
.********.***************************

90. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 3, identity: 0.921

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaaattaaataaaactaaaaatttttataaatcgatag	Protospacer
**. ******************************.***

91. spacer 1.18|153891|45|NZ_CP006909|CRT matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 3, identity: 0.933

gcagttaaacttagaaaaattaaaaaacatggaggaaaatagtag	CRISPR spacer
aaggttaaacttagaaaaattaaaaaacatggaggaaaatagtag	Protospacer
. .******************************************

92. spacer 1.4|153637|40|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 4, identity: 0.9

aaacttttctattctgcgcctctcttataaaaaagaaccc	CRISPR spacer
aaacttttctattctgcacctctcttataaaaaaagaacc	Protospacer
*****************.****************..* **

93. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NC_010418 (Clostridium botulinum A3 str. Loch Maree plasmid pCLK, complete sequence) position: , mismatch: 4, identity: 0.895

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaaattaaataaaactaaaaatttttataaatcgatat	Protospacer
**. ******************************.**

94. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KM583822 (Helicobacter pylori strain UM352 plasmid pUM352, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

95. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KM583823 (Helicobacter pylori strain UM426 plasmid pUM426, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

96. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KM583818 (Helicobacter pylori strain UM171 plasmid pUM171, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

97. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KM583809 (Helicobacter pylori strain UM046 plasmid pUM046-2, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

98. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KM583819 (Helicobacter pylori strain UM196 plasmid pUM196, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

99. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KM583816 (Helicobacter pylori strain UM146 plasmid pUM146, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

100. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KM583812 (Helicobacter pylori strain UM096 plasmid pUM096, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

101. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_017369 (Helicobacter pylori F30 plasmid pHPF30, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

102. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP031559 (Helicobacter pylori strain GD63 plasmid pHPGD63, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

103. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_010884 (Helicobacter pylori strain 69 plasmid pHP69, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

104. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_001476 (Helicobacter pylori plasmid pHPM186, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

105. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP053257 (Helicobacter pylori A45 plasmid unnamed, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

106. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_011334 (Helicobacter pylori G27 plasmid pHPG27, complete sequence) position: , mismatch: 4, identity: 0.862

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatatcat-	Protospacer
******* * ************* * ***

107. spacer 1.14|153631|46|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 4, identity: 0.913

gaagttaaacttttctattctgcgcctctcttataaaaaagaaccc	CRISPR spacer
gaagttaaacttttctattctgcacctctcttataaaaaaagaacc	Protospacer
***********************.****************..* **

108. spacer 1.1|153452|40|NZ_CP006909|CRISPRCasFinder matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 5, identity: 0.875

aaacttatatttatgcatttgtaaaacctccgttcgtttg---	CRISPR spacer
aaacttatatttatgcatttgtaaaacctcc---tgtgtgccc	Protospacer
*******************************   .** **

109. spacer 1.2|153517|42|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 5, identity: 0.881

aaattatgaaaaatcttatatctttttttattttttcggtag	CRISPR spacer
aaattatgaaaaatcttatatctttttttatttttctggagt	Protospacer
***********************************..** .

110. spacer 1.4|153637|40|NZ_CP006909|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 5, identity: 0.875

aaacttttctattctgcgcctctcttataaaaaagaaccc	CRISPR spacer
aaacttttctattctgcacctctcttataaaaaaagaact	Protospacer
*****************.****************..* *.

111. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to CP024688 (Bacillus wiedmannii bv. thuringiensis strain FCC41 plasmid pFCC41-4-144K, complete sequence) position: , mismatch: 5, identity: 0.828

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacata	Protospacer
* *.* .*********** **********

112. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_005917 (Helicobacter pylori plasmid pAL202, complete sequence) position: , mismatch: 5, identity: 0.828

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatctcat-	Protospacer
******* * *************   ***

113. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_004950 (Helicobacter pylori plasmid pHel4 complete sequence) position: , mismatch: 5, identity: 0.828

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatctcat-	Protospacer
******* * *************   ***

114. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_017383 (Helicobacter pylori v225d plasmid pHPv225d, complete sequence) position: , mismatch: 5, identity: 0.828

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatctcat-	Protospacer
******* * *************   ***

115. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_011499 (Helicobacter pylori P12 plasmid HPP12, complete sequence) position: , mismatch: 5, identity: 0.828

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatctcat-	Protospacer
******* * *************   ***

116. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_017373 (Helicobacter pylori SouthAfrica7 plasmid, complete sequence) position: , mismatch: 5, identity: 0.828

aaactacatttttatattttata-aacata	CRISPR spacer
aaactacttgtttatattttatatctcat-	Protospacer
******* * *************   ***

117. spacer 1.11|153446|46|NZ_CP006909|CRT matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 5, identity: 0.891

aaagttaaacttatatttatgcatttgtaaaacctccgttcgtttg---	CRISPR spacer
aaagttaaacttatatttatgcatttgtaaaacctcc---tgtgtgccc	Protospacer
*************************************   .** **

118. spacer 1.12|153511|48|NZ_CP006909|CRT matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 5, identity: 0.896

gaagttaaattatgaaaaatcttatatctttttttattttttcggtag	CRISPR spacer
gaagttaaattatgaaaaatcttatatctttttttatttttctggagt	Protospacer
*****************************************..** .

119. spacer 1.14|153631|46|NZ_CP006909|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 5, identity: 0.891

gaagttaaacttttctattctgcgcctctcttataaaaaagaaccc	CRISPR spacer
gaagttaaacttttctattctgcacctctcttataaaaaaagaact	Protospacer
***********************.****************..* *.

120. spacer 2.11|155479|37|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP006909 (Clostridium botulinum CDC_1436 plasmid pCBG, complete sequence) position: , mismatch: 5, identity: 0.865

ttttctattctgcacctctcttataaaaaaagaaccc	CRISPR spacer
ttttctattctgcgcctctcttataaaaaagaaccct	Protospacer
*************.****************..* **.

121. spacer 2.14|155677|37|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 5, identity: 0.865

tatttaattctttaattacctttttctgttc---tttaca	CRISPR spacer
tatttaattctttaattacttttttttgttccgattt---	Protospacer
*******************.*****.*****   ***

122. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP017256 (Clostridium taeniosporum strain 1/k plasmid pCt3, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
aaactacttttttctattttataatgagt	Protospacer
******* ***** **********  *

123. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_015418 (Clostridium botulinum BKT015925 plasmid p3BKT015925, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
aatctacatttttatattttctaattctt	Protospacer
** ***************** *** . *

124. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KT186230 (Bacillus anthracis strain P.NO2 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

125. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KJ776578 (Clostridium botulinum strain CDC3875 plasmid pCDC3875, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
tatcttcatttttatatttaataaacctt	Protospacer
 * ** ************* ****** *

126. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KJ776581 (Clostridium botulinum strain IFR_05/025 plasmid p05/025, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
tatcttcatttttatatttaataaacctt	Protospacer
 * ** ************* ****** *

127. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_KJ776580 (Clostridium botulinum strain CDC5900 plasmid pCDC5900, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
tatcttcatttttatatttaataaacctt	Protospacer
 * ** ************* ****** *

128. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP022045 (Bacillus anthracis strain FDAARGOS_341 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

129. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_007322 (Bacillus anthracis str. 'Ames Ancestor' plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

130. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_012579 (Bacillus anthracis str. CDC 684 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

131. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP015777 (Bacillus anthracis strain Tangail-1 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

132. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP018904 (Bacillus anthracis strain Tyrol 4675 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

133. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP023002 (Bacillus anthracis strain 14RA5914 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

134. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_AP019732 (Bacillus anthracis strain PCr plasmid PCr-pXO1) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

135. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_AP018444 (Bacillus anthracis strain CZC5 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

136. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP004365 (Komagataeibacter xylinus E25 plasmid pGX5, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
aaacaatatttttatattttatatttgta	Protospacer
**** *.****************  ..**

137. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP029324 (Bacillus anthracis strain 17OD930 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

138. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_012656 (Bacillus anthracis str. A0248 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

139. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_010934 (Bacillus cereus strain G9241 plasmid pBCXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

140. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP019589 (Bacillus anthracis strain SPV842_15 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

141. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP010853 (Bacillus anthracis strain A1144 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

142. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP007665 (Bacillus anthracis str. Vollum plasmid unnamed, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

143. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP008847 (Bacillus anthracis strain HYU01 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

144. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP006743 (Bacillus anthracis str. SVA11 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

145. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_AP014834 (Bacillus anthracis strain Shikan-NIID plasmid pXO1) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

146. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP029806 (Bacillus anthracis strain London_499 plasmid pX01, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

147. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_001496 (Bacillus anthracis virulence plasmid PX01, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

148. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_017726 (Bacillus anthracis str. H9401 plasmid BAP1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

149. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP014177 (Bacillus anthracis strain Stendal plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

150. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009597 (Bacillus anthracis str. V770-NP-1R plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

151. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009901 (Bacillus anthracis strain 2002013094 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

152. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009340 (Bacillus anthracis strain Ohio ACB plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

153. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009696 (Bacillus anthracis strain RA3 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

154. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009699 (Bacillus anthracis strain BA1035 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

155. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009592 (Bacillus cereus G9241 plasmid pBCX01, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

156. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_AP017916 (Candidatus Azobacteroides pseudotrichonymphae plasmid pAPPJ2 DNA, complete sequence, phylotype ProJPt-1) position: , mismatch: 6, identity: 0.793

aaactaca---tttttatattttataaacata	CRISPR spacer
---tttcatattttttatattttataaatata	Protospacer
   .* **   *****************.***

157. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009543 (Bacillus anthracis strain BA1015 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

158. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP010321 (Bacillus anthracis strain Canadian Bison isolate A0369 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

159. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009540 (Bacillus anthracis str. Sterne plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

160. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009330 (Bacillus anthracis strain K3 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

161. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009324 (Bacillus anthracis strain PAK-1 plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

162. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009327 (Bacillus anthracis strain Vollum 1B plasmid 1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

163. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP001975 (Bacillus anthracis str. A16R plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

164. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP009980 (Bacillus anthracis strain Ames isolate BACI008 plasmid unnamed1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

165. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP001971 (Bacillus anthracis str. A16 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

166. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_013940 (Deferribacter desulfuricans SSM1 megaplasmid pDF308, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
aaactacattttgataatttatatcagta	Protospacer
************ *** ******   .**

167. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_017232 (Borreliella afzelii PKo plasmid lp17, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
aagttgtatttttatatttgataaacatt	Protospacer
**..*..************ ********

168. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP047132 (Bacillus anthracis str. BF1 plasmid pXO1, complete sequence) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
atattttatttttatattatataaacatt	Protospacer
* *.* .*********** *********

169. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250021 (Prevotella phage Lak-B2, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

170. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250024 (Prevotella phage Lak-B5, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

171. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250028 (Prevotella phage Lak-B9, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

172. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250023 (Prevotella phage Lak-B4, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

173. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250025 (Prevotella phage Lak-B6, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

174. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to KU052488 (Lactobacillus phage SA-C12, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
taactatatttatatattttataataatt	Protospacer
 *****.**** ************  **

175. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250022 (Prevotella phage Lak-B3, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

176. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250027 (Prevotella phage Lak-B8, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

177. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_029119 (Staphylococcus phage SPbeta-like, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
attcaaaatttttatattttttaaacatt	Protospacer
*  * * ************* *******

178. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250026 (Prevotella phage Lak-B7, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

179. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_047897 (Lactobacillus phage Lenus, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
taactatatttatatattttataataatt	Protospacer
 *****.**** ************  **

180. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MK250020 (Prevotella phage Lak-B1, complete genome) position: , mismatch: 6, identity: 0.793

aaactacatttttatattttataaacata	CRISPR spacer
caaaaacatttatatattatataaacatt	Protospacer
 **  ****** ****** *********

181. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP013684 (Clostridium botulinum strain AM282 plasmid pRSJ10_1, complete sequence) position: , mismatch: 6, identity: 0.806

tttatttgtttttattgttactattaacacg---	CRISPR spacer
tttatttgttttta---ttattattagcatgttt	Protospacer
**************   ***.*****.**.*

182. spacer 1.8|153897|39|NZ_CP006909|CRISPRCasFinder matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 7, identity: 0.821

aaacttagaaaaattaaaaaacatggagga-----aaatagtag	CRISPR spacer
aaacttagaaacattataaaacatggaggatttttaaat-----	Protospacer
*********** **** *************     ****

183. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP039706 (Clostridium butyricum strain 4-1 plasmid p-butyl_plas_4-1, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
taactaaatttttatattttataattgac	Protospacer
 ***** ***************** ..

184. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP033246 (Clostridium butyricum strain CFSA3987 plasmid pCFSA3987, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
taactaaatttttatattttataattgac	Protospacer
 ***** ***************** ..

185. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP033248 (Clostridium butyricum strain CFSA3989 plasmid pCFSA3989, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
taactaaatttttatattttataattgac	Protospacer
 ***** ***************** ..

186. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP013238 (Clostridium butyricum strain CDC_51208 plasmid pNPD4_2, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
taactaaatttttatattttataattgac	Protospacer
 ***** ***************** ..

187. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_AP019717 (Clostridium butyricum strain NBRC 13949 plasmid pCBU1, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
taactaaatttttatattttataattgac	Protospacer
 ***** ***************** ..

188. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP015884 (Enterococcus faecalis strain sorialis plasmid Efsorialis-p1, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
cgtttccatttttttattttataaatata	Protospacer
 . .* ******* ***********.***

189. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP020413 (Leptospira interrogans serovar Copenhageni strain FDAARGOS_203 plasmid unnamed1, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
caattacatttttatattttttaagtttg	Protospacer
 **.**************** ***.. *.

190. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NZ_CP041297 (Acinetobacter indicus strain 80-1-2 plasmid p80-1-2-tetX3, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
aagagccatttttttattttataaacaat	Protospacer
**.   ******* *************

191. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to NC_004845 (Helicobacter pylori plasmid pHPM8, complete sequence) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
aaactacttgtttatattttatatattat	Protospacer
******* * ************* *.

192. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MF547662 (Clostridioides phage LIBA6276, complete genome) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
atttatcatttgtatattttataaactta	Protospacer
*  .  ***** ************** **

193. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MF547663 (Clostridioides phage LIBA2945, complete genome) position: , mismatch: 7, identity: 0.759

aaactacatttttatattttataaacata	CRISPR spacer
atttatcatttgtatattttataaactta	Protospacer
*  .  ***** ************** **

194. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NC_018265 (Melissococcus plutonius DAT561 plasmid 1, complete sequence) position: , mismatch: 7, identity: 0.774

tttatttgtttttattgttactattaacacg-	CRISPR spacer
attaattgttttttttgttacta-taatagat	Protospacer
 *** ******** ********* ***.* .

195. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP006684 (Melissococcus plutonius S1 plasmid pMEPL_178, complete sequence) position: , mismatch: 7, identity: 0.774

tttatttgtttttattgttactattaacacg-	CRISPR spacer
attaattgttttttttgttacta-taatagat	Protospacer
 *** ******** ********* ***.* .

196. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_AP021886 (Melissococcus plutonius strain DAT1033 plasmid pMP1, complete sequence) position: , mismatch: 7, identity: 0.774

tttatttgtttttattgttactattaacacg-	CRISPR spacer
attaattgttttttttgttacta-taatagat	Protospacer
 *** ******** ********* ***.* .

197. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_AP018525 (Melissococcus plutonius strain DAT585 plasmid pMP1, complete sequence) position: , mismatch: 7, identity: 0.774

tttatttgtttttattgttactattaacacg-	CRISPR spacer
attaattgttttttttgttacta-taatagat	Protospacer
 *** ******** ********* ***.* .

198. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to MN693165 (Marine virus AFVG_25M308, complete genome) position: , mismatch: 7, identity: 0.774

tttatttgtttttattgttactat----taacacg	CRISPR spacer
attatttgtgtttattgttattatggtataa----	Protospacer
 ******** **********.***    ***

199. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MN693664 (Marine virus AFVG_250M619, complete genome) position: , mismatch: 8, identity: 0.724

aaactacatttttatattttataaacata	CRISPR spacer
accaagtatttttatattttatatacatt	Protospacer
*    ..**************** ****

200. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP013700 (Clostridium botulinum strain AM1195 plasmid pRSJ11_1, complete sequence) position: , mismatch: 8, identity: 0.742

tttatttgtttttattgttactattaacacg	CRISPR spacer
tttatttgtttttattattattatcatgttt	Protospacer
****************.***.***.*   .

201. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to AP014119 (Uncultured Mediterranean phage uvMED isolate uvMED-GF-C36-MedDCM-OCT-S41-C69, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.742

tttatttgtttttattgttactattaacacg	CRISPR spacer
tgatattgtttttattgttaccattaactgt	Protospacer
*    ****************.******

202. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_LR214986 (Mycoplasma cynos strain NCTC10142 plasmid 13) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
attttttaattatatcattttataaaaattattatg	Protospacer
  **..*  **** ** *******************

203. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013508 (Uncultured Mediterranean phage uvMED DNA, complete genome, group G2, isolate: uvMED-CGR-C15J-MedDCM-OCT-S37-C55) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

204. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013868 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S36-C128, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

205. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013873 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S40-C136, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

206. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013864 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S26-C75, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

207. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013867 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S34-C62, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

208. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013875 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S45-C106, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

209. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013870 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S38-C53, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

210. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013865 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S32-C115, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

211. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to AP013872 (Uncultured Mediterranean phage uvMED isolate uvMED-CGF-C15J-MedDCM-OCT-S39-C133, *** SEQUENCING IN PROGRESS ***) position: , mismatch: 8, identity: 0.778

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tttacttacatatttcttatgataaaaattattatg	Protospacer
* * *.* . ******** * ***************

212. spacer 1.9|153961|29|NZ_CP006909|CRISPRCasFinder matches to MH884508 (Bacillus phage vB_BcoS-136, complete genome) position: , mismatch: 9, identity: 0.69

aaactacatttttatattttataaacata	CRISPR spacer
cgtgtacatttttattttttataaagtct	Protospacer
 .  *********** *********  .

213. spacer 2.1|154825|32|NZ_CP006909|CRT matches to NZ_CP020558 (Paenibacillus larvae subsp. pulvifaciens strain SAG 10367 plasmid pPLP3, complete sequence) position: , mismatch: 9, identity: 0.719

aaagataaaaaacaattgtaagtattattaat	CRISPR spacer
agaagcaaaaaacaattggaagaattatttca	Protospacer
*.*...************ *** ******

214. spacer 2.4|155017|31|NZ_CP006909|CRT,CRISPRCasFinder matches to NZ_CP015352 (Bacillus thuringiensis strain MYBT18246 plasmid p142098, complete sequence) position: , mismatch: 9, identity: 0.71

tttatttgtttttattgttactattaacacg	CRISPR spacer
attatttctttttattgttattatctcagct	Protospacer
 ****** ************.***.   .*

215. spacer 2.12|155545|38|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_010379 (Clostridium botulinum B1 str. Okra plasmid pCLD, complete sequence) position: , mismatch: 9, identity: 0.763

ttatatctatgcatttgcaaaacctccatt----tcctgttg	CRISPR spacer
ttatatttatgcatttgtaaaacctcctgtgtgcccct----	Protospacer
******.**********.*********  *    .***

216. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP040783 (Bacillus thuringiensis strain HM-311 plasmid p1, complete sequence) position: , mismatch: 9, identity: 0.75

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tgagtatatttctttctttttatacaaattattaag	Protospacer
*.  . * *** ************ ********* *

217. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NZ_CP018750 (Borreliella garinii strain CIP 103362 isolate 20047 plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.737

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaataaaaataaaaataaaattttttataaatctcttt	Protospacer
**..  ******** ***** ************  *

218. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NZ_CP028867 (Borreliella garinii strain 20047 plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.737

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaataaaaataaaaataaaattttttataaatctcttt	Protospacer
**..  ******** ***** ************  *

219. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NZ_CP015797 (Borrelia mayonii strain MN14-1539 plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.737

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaataaaaataaaaataaaattttttataaatctcttt	Protospacer
**..  ******** ***** ************  *

220. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NZ_CP015781 (Borrelia mayonii strain MN14-1420 plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.737

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaataaaaataaaaataaaattttttataaatctcttt	Protospacer
**..  ******** ***** ************  *

221. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NC_017725 (Borreliella garinii BgVir plasmid cp26, complete sequence) position: , mismatch: 10, identity: 0.737

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
aaataaaaataaaaataaaactttttataaatctcttt	Protospacer
**..  ******** ***** ************  *

222. spacer 1.18|153891|45|NZ_CP006909|CRT matches to NC_025146 (Clostridium botulinum plasmid pCB111 DNA, complete sequence, strain: 111) position: , mismatch: 10, identity: 0.778

gcagttaaacttagaaaaattaaaaaacatggagga-----aaatagtag	CRISPR spacer
aaggttaaacttagaaacattataaaacatggaggatttttaaat-----	Protospacer
. .************** **** *************     ****

223. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP014283 (Bacillus thuringiensis strain Bt185 plasmid pBT1850636, complete sequence) position: , mismatch: 10, identity: 0.722

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
ggagtatatttctttctttttatacaaattattaag	Protospacer
 .  . * *** ************ ********* *

224. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP032614 (Bacillus thuringiensis strain QZL38 plasmid p.1, complete sequence) position: , mismatch: 10, identity: 0.722

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
ggagtatatttctttctttttatacaaattattaag	Protospacer
 .  . * *** ************ ********* *

225. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NZ_CP011156 (Bacillus cereus strain HN001 plasmid pRML01, complete sequence) position: , mismatch: 10, identity: 0.722

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
ggagtatatttctttctttttatacaaattattaag	Protospacer
 .  . * *** ************ ********* *

226. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to JN638751 (Bacillus phage G, complete genome) position: , mismatch: 10, identity: 0.722

tattcctttttatttctttttataaaaattattatg	CRISPR spacer
tattcctttctatttcttttaataaataaccgcaaa	Protospacer
*********.********** ***** * .  .* .

227. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NC_018983 (Borrelia burgdorferi 297 plasmid 297_cp26, complete sequence) position: , mismatch: 11, identity: 0.711

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
gataaaaaataaaaataaaattttttataaatctcttt	Protospacer
.*    ******** ***** ************  *

228. spacer 1.6|153768|38|NZ_CP006909|CRISPRCasFinder matches to NC_017395 (Borreliella burgdorferi JD1 plasmid JD1 cp26, complete sequence) position: , mismatch: 11, identity: 0.711

aagcttaaataaaactaaaaatttttataaatcggtag	CRISPR spacer
gataaaaaataaaaataaaattttttataaatctcttt	Protospacer
.*    ******** ***** ************  *

229. spacer 2.13|155612|36|NZ_CP006909|CRT,CRISPRCasFinder,PILER-CR matches to NC_014389 (Butyrivibrio proteoclasticus B316 plasmid pCY360, complete sequence) position: , mismatch: 11, identity: 0.694

-------tattcctttttatttctttttataaaaattattatg	CRISPR spacer
acaagaatg-------ttatttctttttataaaaaccattata	Protospacer
       *.       *******************..*****.

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

110204 : 121905

Clostridium_botulinum_D_phage(33.33%)

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_040110070.1\|110204_112085_-	botulinum neurotoxin hemagglutinin HA70 subunit	Q786X9	Clostridium_botulinum_D_phage	1.9e-236	67.4
WP_030032391.1\|112098_112539_-	hemagglutinin	Q786Y1	Clostridium_botulinum_D_phage	3.5e-48	64.4
WP_040110071.1\|112601_113486_-	ricin-type beta-trefoil lectin domain protein	Q38196	Clostridium_botulinum_phage	2.1e-36	34.5
WP_040110072.1\|113712_114249_+	botulinum neurotoxin transcription-activating sigma factor BotR	Q38195	Clostridium_botulinum_phage	2.8e-39	52.2
WP_040110177.1\|114410_118004_+	non-toxic nonhemagglutinin NTNH	Q332E1	Clostridium_botulinum_C_phage	0.0e+00	69.4
WP_040110073.1\|118029_121905_+	botulinum neurotoxin type B	Q332E0	Clostridium_botulinum_C_phage	7.8e-184	33.2

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_CP006908

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

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Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection

2. NZ_CP006909

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CRISPR-Cas detection and classification

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Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection