CRISPRimmunity

Please click to download your results

Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_CP007563	Candidatus Portiera aleyrodidarum MED (Bemisia tabaci) strain BT-Q chromosome, complete genome	4 crisprs	NA	1	1	0	0

Cas Category Instructions

Results visualization

1. NZ_CP007563

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Crispr_ID: NZ_CP007563_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007563_1

133419-133498

Orphan

Consensus_repeat	Method
TAAGCTCTAATAGATAAAACATCA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007563_1

>merge|NZ_CP007563|1|133419-133498|CRISPRCasFinder
TAAGCTCTAAGCTCTAATAGATAAAACATCACCTCTTAAATCTTAAAAGCAACCTTTAACCTCTACTAACTAACAAATAA

>NZ_CP007563|1|1|133419-133498|CRISPRCasFinder
TAAGCTCTAAGCTCTAATAGATAA	AACATCACCTCTTAAATCTTAAAAGCAACCTT
TAACCTCTACTAACTAACAAATAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007563.1\|WP_014943238.1\|119725_121216_+\|lysine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234778
NZ_CP007563.1\|WP_080587198.1\|138374_139565_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	unknown	unknown	gnl\|CDD\|235571
NZ_CP007563.1\|WP_014895025.1\|121854_122697_+\|RNA-polymerase-sigma-factor-RpoH	unknown	unknown	gnl\|CDD\|235838
NZ_CP007563.1\|WP_014895019.1\|115079_115319_+\|30S-ribosomal-protein-S20	unknown	unknown	gnl\|CDD\|178943
NZ_CP007563.1\|WP_014895018.1\|114103_115087_+\|Obg-family-GTPase-CgtA	unknown	unknown	gnl\|CDD\|237047
NZ_CP007563.1\|WP_014895024.1\|121180_121795_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	unknown	unknown	gnl\|CDD\|367574
NZ_CP007563.1\|WP_014895038.1\|145987_147010_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	unknown	unknown	gnl\|CDD\|236585
NZ_CP007563.1\|WP_014895037.1\|143881_145240_+\|replicative-DNA-helicase	unknown	unknown	gnl\|CDD\|273206
NZ_CP007563.1\|WP_014943241.1\|135677_138326_+\|2-oxoglutarate-dehydrogenase-E1-component	unknown	unknown	gnl\|CDD\|236499
NZ_CP007563.1\|WP_014943240.1\|134213_135647_+\|glutamate--tRNA-ligase	unknown	unknown	gnl\|CDD\|234953
NZ_CP007563.1\|WP_014895026.1\|122710_122926_+\|50S-ribosomal-protein-L28	unknown	unknown	gnl\|CDD\|234736
NZ_CP007563.1\|WP_014895027.1\|122942_123092_+\|50S-ribosomal-protein-L33	unknown	unknown	gnl\|CDD\|179075
NZ_CP007563.1\|WP_014895017.1\|113849_114116_+\|50S-ribosomal-protein-L27	unknown	unknown	gnl\|CDD\|235464
NZ_CP007563.1\|WP_040966654.1\|142070_142322_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007563.1\|WP_146256541.1\|118753_119725_+\|peptide-chain-release-factor-2	unknown	unknown	gnl\|CDD\|234799
NZ_CP007563.1\|WP_014943245.1\|143453_143885_+\|50S-ribosomal-protein-L9	unknown	unknown	gnl\|CDD\|234659
NZ_CP007563.1\|WP_040966667.1\|142897_143200_+\|30S-ribosomal-protein-S6	unknown	unknown	gnl\|CDD\|179034
NZ_CP007563.1\|WP_014943237.1\|115334_118181_+\|isoleucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235588
NZ_CP007563.1\|WP_014943243.1\|139585_141004_+\|dihydrolipoyl-dehydrogenase	unknown	unknown	gnl\|CDD\|235779
NZ_CP007563.1\|WP_014895035.1\|143208_143448_+\|30S-ribosomal-protein-S18	unknown	unknown	gnl\|CDD\|178997

Protein	Function_ID	Function_description	E-value
NZ_CP007563.1\|WP_014943238.1\|119725_121216_+\|lysine--tRNA-ligase	gnl\|CDD\|234778	PRK00484, lysS, lysyl-tRNA synthetase; Reviewed.	0
NZ_CP007563.1\|WP_080587198.1\|138374_139565_+\|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase	gnl\|CDD\|235571	PRK05704, PRK05704, 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase.	4.28192e-177
NZ_CP007563.1\|WP_014895025.1\|121854_122697_+\|RNA-polymerase-sigma-factor-RpoH	gnl\|CDD\|235838	PRK06596, PRK06596, RNA polymerase factor sigma-32; Reviewed.	3.34233e-151
NZ_CP007563.1\|WP_014895019.1\|115079_115319_+\|30S-ribosomal-protein-S20	gnl\|CDD\|178943	PRK00239, rpsT, 30S ribosomal protein S20; Reviewed.	4.29732e-11
NZ_CP007563.1\|WP_014895018.1\|114103_115087_+\|Obg-family-GTPase-CgtA	gnl\|CDD\|237047	PRK12298, obgE, GTPase CgtA; Reviewed.	2.39888e-105
NZ_CP007563.1\|WP_014895024.1\|121180_121795_-\|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD	gnl\|CDD\|367574	pfam03602, Cons_hypoth95, Conserved hypothetical protein 95.	1.57193e-46
NZ_CP007563.1\|WP_014895038.1\|145987_147010_-\|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD	gnl\|CDD\|236585	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD.	3.97475e-129
NZ_CP007563.1\|WP_014895037.1\|143881_145240_+\|replicative-DNA-helicase	gnl\|CDD\|273206	TIGR00665, DnaB, replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of > 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites. [DNA metabolism, DNA replication, recombination, and repair].	0
NZ_CP007563.1\|WP_014943241.1\|135677_138326_+\|2-oxoglutarate-dehydrogenase-E1-component	gnl\|CDD\|236499	PRK09404, sucA, 2-oxoglutarate dehydrogenase E1 component; Reviewed.	0
NZ_CP007563.1\|WP_014943240.1\|134213_135647_+\|glutamate--tRNA-ligase	gnl\|CDD\|234953	PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed.	0
NZ_CP007563.1\|WP_014895026.1\|122710_122926_+\|50S-ribosomal-protein-L28	gnl\|CDD\|234736	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed.	1.90492e-27
NZ_CP007563.1\|WP_014895027.1\|122942_123092_+\|50S-ribosomal-protein-L33	gnl\|CDD\|179075	PRK00595, rpmG, 50S ribosomal protein L33; Validated.	5.78612e-11
NZ_CP007563.1\|WP_014895017.1\|113849_114116_+\|50S-ribosomal-protein-L27	gnl\|CDD\|235464	PRK05435, rpmA, 50S ribosomal protein L27; Validated.	4.02279e-42
NZ_CP007563.1\|WP_146256541.1\|118753_119725_+\|peptide-chain-release-factor-2	gnl\|CDD\|234799	PRK00578, prfB, peptide chain release factor 2; Validated.	2.50595e-149
NZ_CP007563.1\|WP_014943245.1\|143453_143885_+\|50S-ribosomal-protein-L9	gnl\|CDD\|234659	PRK00137, rplI, 50S ribosomal protein L9; Reviewed.	8.16347e-25
NZ_CP007563.1\|WP_040966667.1\|142897_143200_+\|30S-ribosomal-protein-S6	gnl\|CDD\|179034	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed.	9.71395e-16
NZ_CP007563.1\|WP_014943237.1\|115334_118181_+\|isoleucine--tRNA-ligase	gnl\|CDD\|235588	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed.	0
NZ_CP007563.1\|WP_014943243.1\|139585_141004_+\|dihydrolipoyl-dehydrogenase	gnl\|CDD\|235779	PRK06327, PRK06327, dihydrolipoamide dehydrogenase; Validated.	0
NZ_CP007563.1\|WP_014895035.1\|143208_143448_+\|30S-ribosomal-protein-S18	gnl\|CDD\|178997	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed.	2.69052e-30

>NZ_CP007563.1|WP_014895027.1|122942_123092_+|50S-ribosomal-protein-L33
MRKKIKLVSTKGTGHCYSTYKNKRENKKKLNLKKYDPIIRRHVNYRESK
>NZ_CP007563.1|WP_014895026.1|122710_122926_+|50S-ribosomal-protein-L28
MTKRCQITYKKPMQGNNVSHSHRKTRRRFMPNLQKHRFWIKKEKRYIKMHITTKGMRIIDKYGIEKVLIKT
>NZ_CP007563.1|WP_014895025.1|121854_122697_+|RNA-polymerase-sigma-factor-RpoH
MIQNYPETNIEGYIKTVLGFPIISAQDEYDLARRLRNKGDLDAARCLVISNLRFVIHIARSYSGYGLQNSDIIQEGNVGLMKAVKRFDPAHGVRLVSFAIHWIKAEIHEYVLRNWRIVKIATTKSQRKLFFSLRCAKTSLNWLNREEIKSIAKDLNVKPTVVREMECRLSSTDYGFDNKQKEEKNNYKNPSNYLEDSRFDPALQFENFDFERYSYRRLYVALNKLDERVRDILKQRWLNEQKATLHELADIYGVSAERIRQLEQRAIKKIKNYINISTYI
>NZ_CP007563.1|WP_014895024.1|121180_121795_-|16S-rRNA-(guanine(966)-N(2))-methyltransferase-RsmD
MINYFNVIRLIGGCKKRSILNLPYTNLHGGRCVRPTLINVREIFFDLIKNDITNKTIFDLYAGSGSLGFEAISRGAKYVLFLETNKSFVKNLYLNKKKLKFCKSVRIIKTNSIKHINKVASNSFDIIFIDPPFCRGLAYPSINLLELNGWLNDKALIYLEVESKLDLFLLPNTWTLYKELTLGNYHILLYRRFLNFTATQQRKK
>NZ_CP007563.1|WP_014943238.1|119725_121216_+|lysine--tRNA-ligase
MIIKNYLIKDRLNKLQVLSKTANKAGKSAFYNKFRRTSLAKSLKKIFGEKNKKQLVNLKLTTAVAGRIMRKRGPFIVVQDVSSNIQLYIDKKTISNEIHKYIKDWDIGDIIGAIGDIDKSKIGELYLLVKKAYILTKSIRPLPSKFHGIKDQEIRYRHRYLDFIMNKEVRKSFKIRTRIISALRKFFYELYFLEAETPILHSMPGGAIAKPFETYNYSLNIKLYLRIAPELYLKRLVVGGFERVFEINKNFRNEGLSTWHNPEFTMLEFYWAFATYKDLMEITEHMIRFVANEALGTTIINIGNILNIDLSEPFDCLSMRDSLIKYGKTFSINNSDFYDLESLLFLSKRIGLTVANYNNYGNLLNKLFEVIVERKLIKPTFVTDYPVEVSPLARSKDSNLNITERFELFIGGREIANGFSELNDYIEQSNRFYLQLRNKYTYDLSNFDMDYIRALEYGMPPTAGEGVGIDRLVMILTNKDSIRDVLLFPLLRSRKV
>NZ_CP007563.1|WP_146256541.1|118753_119725_+|peptide-chain-release-factor-2
MKYKNYTLGFIEIRNIFDEGHENKKAIKNVENGIYNNAELLHLAITELDSKPLSFIKQDIFFFEKELAKLDAVRLFSGDFDKNNAYVEIKAGSGGVESQDWANMLVRMYSRWAVTHDFKTETVNLNIGELLGVKSATLHIKGDYAFGWMRTEKGIHRLVRKSPFDSSKRRHTSFTSVFVYPEITSKVHNIKINTKELRIDTYRSSGAGGQHVNTTDSAVRITHLPTKIVVECQSERSQHSNKERALTLLKTKLYDFDKKKGEVERINIEKKKAGICWGNQIRSYVLDAQRIKDLRTGVKNNNCEKVLNGELDLFIEASIKQGL
>NZ_CP007563.1|WP_014943237.1|115334_118181_+|isoleucine--tRNA-ligase
MINVRYNNTLNLPKTTFPMRGNLSIKEPIRLNKWKQSEIYKKLRQDRKGCKKFILHDGPPYANGHIHIGHAVNKILKDIIIKSKNLEGCDSWYVPGWDCHGLPIELNILKNNNGKFLTSNKIMLYCRKYVEKQIYSQKVDFIRLGILGDWDNAYRTMDFINQAGIIRSLSAIVKKGYVFRGFKPVNWCFQCSSALAESEVDFLEKVSESIDVAFFCIDNYKLVKNFGVNNCIEKPIEVVSWTTTPWSIPANQAIHVLAFCIYVLVDVGVKFILLAEQLVENCLNRYQLNGKIIAKTFGKELEKVRLKHPLHNIDAFYDRITNIYIADYIAIKTGTGIIHASPAYGEDDFIVYSNLQYNENMLKLVKSNGFYIKYLSVFGGQLIWIANSEIINNLNNRIIAKELILHSYMYCWRHKNPLIKMATSQWFVGMDVGKISLRKKALDCLKNVKVYPSSGKTRLYHMISNRPDWCISRQRSWGVPIPFFIKKKRCLLHQRIIEIMEIIAKKVQNEGSEVWIKIKSCEVFGDEDIVYKKITDILDVWFDSGTTHNHVLRGSNFILQKEDKADLYLEGLDQYRGWFHTSLITSAAISGHAPFNKLLSHCFTVDKNGQKMSKSIGNVVSPQTIISKYGADILRLWVVSKDYESEMTMSEDIIQLIADSYRRLRNTTRFMIANLSGFDQSKHGIDPEKLLALDRWALDISANFQHAIKNSYKDYRFVDIYQQLCNFCTRDLGSFYLDIIKDRQYTTQKNSLYRRSCQTTLYHIIEAMSRWITPICTFTAEEIYESLSVKRYNKSVLLETYYRELNPLPKGLVMGRVFWKIIKAVKSEVNKCLENYRKKNIIKSSLDAKVTLYVSETYYKILSLLKGELRFVLITSSAFLKKSVNKTKTAIFTGLSGLQVLVQKSKYKKCERSWELLPDVGRYNKHPKLCARSIDNLPRGPGEVRLYV
>NZ_CP007563.1|WP_014895019.1|115079_115319_+|30S-ribosomal-protein-S20
MDKNRARRQQNSSKRSIVRTYIKRVLKAIKLKKFKLCIEEFYKAQSVFDILADKNIISKRKSARIKSRLNLQIKKELQC
>NZ_CP007563.1|WP_014895018.1|114103_115087_+|Obg-family-GTPase-CgtA
MQFIDETYILIEAGTGGTGCLSFSSLLRGSDGGNGGTGGNIFCIGDKYLNTLFFLNYNKVYKAQNGEIGKPKKQNGNKGKDVFIKVPVGSMLRDAQTCELIGEIIIHRQNIKVAKGGTSGIGNFKTKRSKNMKGTIGESRNLYIELILLADVGCLGIPNSGKSTLIRSITSALPKVARYPFTTLRPFLGFVKLNKTYSFIITDVPGLIIGASQGLGLGLKFIKHLNRIKIICNLLDVMCNKVLDTTLGIISEIKTIYIDMFQKQRYLVLNKLDKLPKYKKSQVIEIVINGLTWRNKTTLFIISAKKKYGCYELKKSALTYLKRGING
>NZ_CP007563.1|WP_014895017.1|113849_114116_+|50S-ribosomal-protein-L27
MAQKKAAGSSRNGRDSNSKRLGIKIYGGQYVISGNIIVRQRGTKVLAGHGVGIGRDHTLFALINGCIFFYNIKKGNRKRKCVKIVCSL
>NZ_CP007563.1|WP_014943240.1|134213_135647_+|glutamate--tRNA-ligase
MKKIRTRIAPSPTGTPHIGTAYISLLNYYFARINNGKVILRIEDTDSKRSKSKFENKILELLHWLGIQWHEGPDIGGKFGPYRQSERNNIYNKYVEKLIKVGKVFKCYRTSEELEKLRKCKVDKTLKEKDLQLDYKELKFRKKHNWPYVIRLKVPNKGKCVFYDVLRGSITMNWDQIDSQVLIKSDGTPTYHLANVVDDYLMGITNVIRGEEWITSTPKHKLLYDYFGWKQPEFCHLPLLRNPDKSKLSKRKQNNSIEFYRKMGYLPQTIINYLGSLGGVKTTKWYRKNTNMKTKVDIKSISLGGPIFDLDKLSWLNGIYIRSMKNETLIQVMYEWAKDYIHKILPTIKPRIKILTDIIHLSEQVFYGLPKLKKEDFKVIALKKKLQIKVLKHLWLQLEYIEKWDKQNILYKVKQVSNQLQMKMKTIIAPIFIAINGRLISTSVINTIVILGKDITRIRIKQAIKLIGGITLKHENK
>NZ_CP007563.1|WP_014943241.1|135677_138326_+|2-oxoglutarate-dehydrogenase-E1-component
MKIALDNVSYLEELYEQYKNKGNVTEEWRQIFDYITKQECRFKTIKTCEKNTIKQMSVLKLITNYRYMGHKKAHINPISGKNKVKAIQLSLHKLNIKDLNKAFNNGVGQNQSKLKEIIDVLDKTYCSSIGCEFRHILNNVEILWLEQSFESVLNKYSQKKNISLHILGLITAAEALEAYLSSNFPGTKRFGIEGGETLIAMLYETIQRAGNYGIKEIFMGMAHRGRINVLVNILRKSPADIIKEFEGKQIYEAYSGDVKYHQGLSSNIKTKGGDVKLNLAFNPSHLEIVYPVIEGAVRARQDYMNDKTKVLPVVVHGDTAFAGQGVVMETLQISKIKEYNTGGTLHILINNQIGFTTYKHNARSTKYCSDIAKMFNYPVLHVNGDDPEAVQYVTQIAVDYRNKFKKDMVIDMICYRRRGHNEADEPSITQPIMYKKIKNNPTTRELYSKHLLKQGLISKSDVKQMVSLYRHKLNYDSNNKAYKKTTGSMYKFHEEDLNDTSFSMKRMRELAVKLCDLGELKVQSKVAKIYSNRRKLVSSNSIKINWGFAELLSYASLLDEGYGIRITGQDTGRGTFSHRLAVIHNQKDGARWTPLQHIKKGQHKFTIVDSSLSEEAALAFEYGYSTTSKNMFVAWEAQFGDFANGAQVVIDQFISSGENKWGSLCSLTLLLPHGYEGQGPEHSSARIERFIQLCAEQNMQVCVPTTPSQVFHLIRSQAKRKNRKPLILMQPKSLLRHKYARSSFEDLSNGRFKTVIGETEKIKPDIVKRVILTSGKVYYDLVAYRKEKNIYETAILRIEQIYPFPEKSIIKKISIYSKCEHIIWCQEEPKNQGAWYQIKYFLNKKLKIRLKFVGRTSASAPASGYFDAHLKQQANLIKEAFF
>NZ_CP007563.1|WP_080587198.1|138374_139565_+|2-oxoglutarate-dehydrogenase-complex-dihydrolipoyllysine-residue-succinyltransferase
MKAPRFPESVNEGTVATWHKKPGDKISPYELIVEVETDKVLLEVVSPTEGFLQIIKIPVGKKCKSEQLLGIIVAQKEEGFYSSGSSSTNIKQQKLCKKEQKVDESEKQELKQFYKQAIELEESYSPEVRKAKTSIDVENLFENGTVQDKRVNIRKENVKYSINEIGVKRVQLSRLRQTITKRIVKAQKNAAMLTTYNEVDMGNILEIRTKYRELFEKKHGTKLGLMGFFVKACTVALKQFKKVNAVIDDKEIVYHNYQDIGIAVSTNRGLVVPILRHTDSIKIEEIEKKIMDFRKRGVDGKLSIKELTGGTFTISNGGVFGSLFSTPIINPPQTAILGMHKIQNRPVVLKGEIVIRPMMYLALSYDHRLIDGKDAVNFLFFVKELLEQPIRFILNI
>NZ_CP007563.1|WP_014943243.1|139585_141004_+|dihydrolipoyl-dehydrogenase
MVSLFDVIVIGSGPAGYVAAIRSAQLGLKTACVEQWMNNGRVVYGGTCLNVGCIPSKTLLEISHKFIDAKANFEKIGINFENISINVKKMIRHKNKIVYSLNDGIAALFKANGVVVLRGSGKILTKKTVEVLHKGKLCNFQAKNIIIASGSIPRCLNQVPFNGDTIIDSAAALNLQEVPNRLGIIGAGIIGIELGSVWSRLGSKVTIFESLDKLLPVIDFSLSKQISQILKKQGLNIKFNVRIIGSEIVNNEVKVRFIDHFGEHCLTFDKLIVCIGRMPFTQSLIDKESGLVIATNGFIKVDRQCKTNLSGIYAVGDVVRGPMLAHKAAQEGIMVAELIAGNQVQLNYDTIPGVIYTSPEVAWVGKNEQQLISYGIKNYKIGIFPFANCGRARTSNEIQGLVKIITDVNDIILGVHIIGHNASELIAQGVIAMEFSSSAEDLALTCFAHPTLSEAIHEAACTASLGNTIHNI
>NZ_CP007563.1|WP_040966654.1|142070_142322_+|hypothetical-protein
MCCSCVFDDLCKCVVVVYGVRVLKRLLVCVVVLKESKRLLVCVVVLKKQVRSCKKKEGKGKNWQLAVGSWQLAVGVGVGVGVL
>NZ_CP007563.1|WP_040966667.1|142897_143200_+|30S-ribosomal-protein-S6
MNYEINILLNVNNDNLTSENIKKLIKIIIENNGRITKLEDLGNLNLYYLIKKQKQANIILINIDCEKYVIKKLEKRLKYNEVIIRYIIIKKSKAKIKVNK
>NZ_CP007563.1|WP_014895035.1|143208_143448_+|30S-ribosomal-protein-S18
MLFRKKKYCRFTAEKVKEIDYKKNDILKLYIAENGKIIPSRITGTKVRYQRKLTKAIKKARYFGLLPYTDKNYNKNGGC
>NZ_CP007563.1|WP_014943245.1|143453_143885_+|50S-ribosomal-protein-L9
MNVILISKNSNSGKKGTIVSVNKGYARNFLIRKGFAIIAKKKNIEYLKQMRKHYLKEYKLYIYKIKTKLKNVKIEIFCKSGQTGKIVGSIGRRYLSKVFYEKYEIKINKKHITIKKNIIKKFGEYKISLYEQINIKINIQKYK
>NZ_CP007563.1|WP_014895037.1|143881_145240_+|replicative-DNA-helicase
MKKIINDKKQTKTPPHSVEAEKALLGGVMLDNAAWKKISEIIKNEDFYSIEHKYIFDAITHIAEKNNKVDMVTVAESLETNNKLQKIGGISYLTELSRNTHSIHNIVAYADIVRECSNLRNLIRISKKIAEEAFNRNGKKVQDIIHKAEKLILTMAESRYRVKKTNLLNLNELLNKTINSINKMYSTKSSMTGLLTGFNELDNMTSGFQKADLIIIAGRPSMGKTSFAMNIVEYIIKTNKSDPVIIFSMEMPAEQLILRLLSSVGRIDQTNIRKGNIGEEDWLKLTESLKKIKNCKLYIDDTPMITPIDIRKTIKKCIRDTGKISLIMIDYLQLMHVSSSFISYNRTAEISEISRSLKSIAKEFNCPILAVSQLNRSLEQRNNKRPIISDLRESGAIEQDADLILFIYRDEVYNSDCLDNKGIAELIIGKQRNGPIGVINIRFTGKYTKFEN
>NZ_CP007563.1|WP_014895038.1|145987_147010_-|tRNA-(adenosine(37)-N6)-threonylcarbamoyltransferase-complex-transferase-subunit-TsaD
MIILGIETSCDDTCIAIYDTKSGLITTKKYTQTIHTIFGGVIPKFSSFYHLNKIIPIIKSLFFKFQIHTTNINAIAYTAGPGLYQSLLIGAYIAYSISYTLKLPILGINHLEGHIFSAMINKKKPDFPFICLLISGGNTQLIDVQNIGHYKILGESKDVSLGETFDKIAKVLKLYYPGGVRLSHLACFGKIKKQNFPKILRNNITFSFSGLKTYILNYLKQFKYTNKYQYKANLAKSFEEYVLNMLSYKCYKALIYYGRSCLLISGGVSANKTLRKHFNLFFKNKLNNFQITFPDQVLCTDNAAMIAYVGALRLTSGEKITNKLLIRPTWCLEELKYPLF

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007563_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007563_2

193684-193918

Orphan

Consensus_repeat	Method
AAAAAAGGTTTGTTAAAGAATAGA	CRISPRCasFinder

4 spacers

The CRISPR arrays of NZ_CP007563_2

>merge|NZ_CP007563|2|193684-193918|CRISPRCasFinder
AAAGAAGGGTTGTTAAACTTTTAATGCTGTATGGTAAAGTTAAGAAGTGGTTGTTAATAAAAAAAAGGTTTGTTAAAGAATAGAAATTAATTAAAAAAAAGGTTTGTTAAAGAATAGAAATTGATTTTAAAAAAGGTTTGTTAAAGAAAGAGGAGTTGTATGGAAGAGGAAAAGGTTTGTTAAAGTAAAGAAGTTAAGGTAGTTGTAAAAAAAAATAGGTATTTTATAGTGTAGT

>NZ_CP007563|2|2|193684-193918|CRISPRCasFinder
AAAGAAGGGTTGTTAAACTTTTAA	TGCTGTATGGTAAAGTTAAGAAGTGGTTGTTAATAA
AAAAAAGGTTTGTTAAAGAATAGA	AATTAATTAAAAAAAAGGTTTGTTAAAGAATAGAAATTGATTTT
AAAAAAGGTTTGTTAAAGAAAGAG	GAGTTGTATGGAAGA
GGAAAAGGTTTGTTAAAGTAAAGA	AGTTAAGGTAGTTGTAAAAA
AAAATAGGTATTTTATAGTGTAGT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007563.1\|WP_014895067.1\|194468_194633_-\|50S-ribosomal-protein-L32	unknown	unknown	gnl\|CDD\|234901
NZ_CP007563.1\|WP_014975162.1\|198960_200061_-\|3-dehydroquinate-synthase	unknown	unknown	gnl\|CDD\|234565
NZ_CP007563.1\|WP_014895073.1\|200568_200772_-\|50S-ribosomal-protein-L31	unknown	unknown	gnl\|CDD\|376487
NZ_CP007563.1\|WP_014943252.1\|182777_184178_-\|3-isopropylmalate-dehydratase-large-subunit	unknown	unknown	gnl\|CDD\|235490
NZ_CP007563.1\|WP_014895064.1\|189996_190218_+\|cold-shock-protein	unknown	unknown	gnl\|CDD\|224197
NZ_CP007563.1\|WP_014895068.1\|194643_195588_-\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|182909
NZ_CP007563.1\|WP_014895058.1\|176003_177083_-\|bifunctional-chorismate-mutase/prephenate-dehydratase	unknown	unknown	gnl\|CDD\|223155
NZ_CP007563.1\|WP_014895065.1\|190266_191934_-\|2-isopropylmalate-synthase	unknown	unknown	gnl\|CDD\|235154
NZ_CP007563.1\|WP_014943250.1\|174678_175998_-\|3-phosphoshikimate-1-carboxyvinyltransferase	unknown	unknown	gnl\|CDD\|237820
NZ_CP007563.1\|WP_040966668.1\|177066_179613_-\|DNA-gyrase-subunit-A	unknown	unknown	gnl\|CDD\|235502
NZ_CP007563.1\|WP_014943251.1\|180155_182570_-\|preprotein-translocase-subunit-SecA	unknown	unknown	gnl\|CDD\|237259
NZ_CP007563.1\|WP_014895056.1\|173025_174570_-\|30S-ribosomal-protein-S1	unknown	unknown	gnl\|CDD\|235775
NZ_CP007563.1\|WP_014895069.1\|195688_197323_+\|Rne/Rng-family-ribonuclease	unknown	unknown	gnl\|CDD\|236766
NZ_CP007563.1\|WP_014895066.1\|194217_194451_-\|acyl-carrier-protein	unknown	unknown	gnl\|CDD\|179197
NZ_CP007563.1\|WP_014943254.1\|200047_200569_-\|shikimate-kinase	unknown	unknown	gnl\|CDD\|234654
NZ_CP007563.1\|WP_014943256.1\|201427_202729_+\|ATP-dependent-protease-ATPase-subunit-HslU	unknown	unknown	gnl\|CDD\|235364
NZ_CP007563.1\|WP_014943255.1\|200882_201407_+\|ATP-dependent-protease-subunit-HslV	unknown	unknown	gnl\|CDD\|235477
NZ_CP007563.1\|WP_014895055.1\|169093_169969_-\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_CP007563.1\|WP_014895063.1\|184179_185268_-\|chorismate-synthase	unknown	unknown	gnl\|CDD\|235438
NZ_CP007563.1\|WP_014895070.1\|197329_198952_-\|MFS-transporter	unknown	unknown	gnl\|CDD\|283599

Protein	Function_ID	Function_description	E-value
NZ_CP007563.1\|WP_014895067.1\|194468_194633_-\|50S-ribosomal-protein-L32	gnl\|CDD\|234901	PRK01110, rpmF, 50S ribosomal protein L32; Validated.	1.14946e-15
NZ_CP007563.1\|WP_014975162.1\|198960_200061_-\|3-dehydroquinate-synthase	gnl\|CDD\|234565	PRK00002, aroB, 3-dehydroquinate synthase; Reviewed.	2.28258e-152
NZ_CP007563.1\|WP_014895073.1\|200568_200772_-\|50S-ribosomal-protein-L31	gnl\|CDD\|376487	pfam01197, Ribosomal_L31, Ribosomal protein L31.	2.33075e-29
NZ_CP007563.1\|WP_014943252.1\|182777_184178_-\|3-isopropylmalate-dehydratase-large-subunit	gnl\|CDD\|235490	PRK05478, PRK05478, 3-isopropylmalate dehydratase large subunit.	0
NZ_CP007563.1\|WP_014895064.1\|189996_190218_+\|cold-shock-protein	gnl\|CDD\|224197	COG1278, CspC, Cold shock proteins [Transcription].	2.35464e-34
NZ_CP007563.1\|WP_014895068.1\|194643_195588_-\|RluA-family-pseudouridine-synthase	gnl\|CDD\|182909	PRK11025, PRK11025, 23S rRNA pseudouridine(955/2504/2580) synthase RluC.	4.5031e-77
NZ_CP007563.1\|WP_014895058.1\|176003_177083_-\|bifunctional-chorismate-mutase/prephenate-dehydratase	gnl\|CDD\|223155	COG0077, PheA, Prephenate dehydratase [Amino acid transport and metabolism].	2.97292e-92
NZ_CP007563.1\|WP_014895065.1\|190266_191934_-\|2-isopropylmalate-synthase	gnl\|CDD\|235154	PRK03739, PRK03739, 2-isopropylmalate synthase; Validated.	0
NZ_CP007563.1\|WP_014943250.1\|174678_175998_-\|3-phosphoshikimate-1-carboxyvinyltransferase	gnl\|CDD\|237820	PRK14806, PRK14806, bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional.	0
NZ_CP007563.1\|WP_040966668.1\|177066_179613_-\|DNA-gyrase-subunit-A	gnl\|CDD\|235502	PRK05560, PRK05560, DNA gyrase subunit A; Validated.	0
NZ_CP007563.1\|WP_014943251.1\|180155_182570_-\|preprotein-translocase-subunit-SecA	gnl\|CDD\|237259	PRK12904, PRK12904, preprotein translocase subunit SecA; Reviewed.	0
NZ_CP007563.1\|WP_014895056.1\|173025_174570_-\|30S-ribosomal-protein-S1	gnl\|CDD\|235775	PRK06299, rpsA, 30S ribosomal protein S1; Reviewed.	0
NZ_CP007563.1\|WP_014895069.1\|195688_197323_+\|Rne/Rng-family-ribonuclease	gnl\|CDD\|236766	PRK10811, rne, ribonuclease E; Reviewed.	0
NZ_CP007563.1\|WP_014895066.1\|194217_194451_-\|acyl-carrier-protein	gnl\|CDD\|179197	PRK00982, acpP, acyl carrier protein; Provisional.	1.9027e-20
NZ_CP007563.1\|WP_014943254.1\|200047_200569_-\|shikimate-kinase	gnl\|CDD\|234654	PRK00131, aroK, shikimate kinase; Reviewed.	1.41534e-57
NZ_CP007563.1\|WP_014943256.1\|201427_202729_+\|ATP-dependent-protease-ATPase-subunit-HslU	gnl\|CDD\|235364	PRK05201, hslU, ATP-dependent protease ATPase subunit HslU.	0
NZ_CP007563.1\|WP_014943255.1\|200882_201407_+\|ATP-dependent-protease-subunit-HslV	gnl\|CDD\|235477	PRK05456, PRK05456, ATP-dependent protease subunit HslV.	1.37026e-115
NZ_CP007563.1\|WP_014895055.1\|169093_169969_-\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	3.515e-151
NZ_CP007563.1\|WP_014895063.1\|184179_185268_-\|chorismate-synthase	gnl\|CDD\|235438	PRK05382, PRK05382, chorismate synthase; Validated.	0
NZ_CP007563.1\|WP_014895070.1\|197329_198952_-\|MFS-transporter	gnl\|CDD\|283599	pfam05977, MFS_3, Transmembrane secretion effector. This is a family of transport proteins. Members of this family include a protein responsible for the secretion of the ferric chelator, enterobactin, and a protein involved in antibiotic resistance.	1.05741e-169

>NZ_CP007563.1|WP_014895065.1|190266_191934_-|2-isopropylmalate-synthase
MKFKFNNKKYCYFDEFPKLKNRDWIDKKISKTPILVSEDLRDGNQSLIEPMTVETKKTMWTLLINIGLKEVMVGFPSASKADFDFVRWLIRNKQIPEDVTIAVLVQARKPLIKRTFESLVGIKKSIIHFYNSTSPIQRDRVFKAQKEAIIAIAAKGAKYILHQTKKYKNVNWIIEYTPESFSNTEIDFTLTICETVLDILSQKNIYKVILNLPTTVDLTSPHVYADQIEYFCKNISKRDKIIISVHTHNDRGSAITSSEVAVLAGAQRIECTLLGNGERTGNLDLIAFAMNLYSQGIDPNIDLHCPEEIIDIVKLCTKLPIHPRHPWVGKLVYTAFSGSHQDAIRKSIKKQKQKEIWQVAYLPIDPKDIGRSYKSVIRLNSQSGKSGFAFLLERDYKIKLPRWIRNYLAPLVQNESERNMFELSSCELYSILKNNCFLETPFCLLNYYIYKNSLQICFNNKLIDNKVTYNMYFSILECKKILLAFIEMWTLHKLTLIKYYIQKINKYYIALIRINLHKHLLIGTAIDFDIISVCLKSILSAINKNFMDCRANKIT
>NZ_CP007563.1|WP_014895064.1|189996_190218_+|cold-shock-protein
MATGTVKWFNDTKGYGFISPDDCGGDLFAHFSEIQDDGFKSLQDGQKVTFEVTQGKKGLQAASIKVIKNKKCT
>NZ_CP007563.1|WP_014895063.1|184179_185268_-|chorismate-synthase
MSGNTFGKLFTVTTFGESHGFALGAIIDGCPPGIEISEKYIQKQLNRRKPGSSKYTTQRREPDKVKILSGLLKGITTGTPIGLLIENIDQRSKDYKTIKKQFRPSHADYTYYQKYGIRDYRGGGRSSARETVMRVASGAIAKKYLSKLNVFIRGYISQIGSIKLPFVTWKIVYTNPFFCADPNKINYLEKYMKKLQREEDSIGAKLTLIAYGVPIGLGEPVFDKLDAELAHALMSINAVKGIEIGSGFLSVNQRGSEHRDEIKNKKIISNNSGGILGGISNGQSLVLNLSLKPTSSITIPGNTIDMYGNSIKVITKGRHDPCVGLRAIPIAEAMVALTLMDHFLRNRAQNIDVNVKNKIGVN
>NZ_CP007563.1|WP_014943252.1|182777_184178_-|3-isopropylmalate-dehydratase-large-subunit
MTGQTLYEKIWSAHLIKSREDGTALIYIDRHLLHEVTSPQAFDGLRLNKRKIWRVDTNIATVDHNVPTNVEERIHGIKDELSRIQINLLKKNCKDFLINKFFNIKDVRQGIVHVIGPEIGATLPGMTVVCGDSHTSTHGAFAALAYGIGTSEVEHVLATQCLLQRKLKNMKVCINGELSVKVTAKDLILSIINIISTDGGTGYAVEFTGSTIKTLSMEGRMTICNMAIEAGAKVGLISVDQNASNYLHGRALVPNIIWNKAIIKWKNLFSDYDAKFDEYIKINAKNIEPQVSWGTQPDMVVGVNGKIPNPKDYPKPDRKNIELAIKYMGLKSEQKIVDIKIDRIFIGSCTNSRIEDLRIAANFLKNNHIAATIKEAIVVPGSGYVKKQAELEGLDEVFISAGFEWREPGCSMCLAMNSDKLDLGDRCASTSNRNYESRQGYGGRTHLVSPAMAAAASIAGHLIDVR
>NZ_CP007563.1|WP_014943251.1|180155_182570_-|preprotein-translocase-subunit-SecA
MLISTLVLKKNDREIKRICNIVYIINDLENHFVSIDNSLLRYKTLEYRKRIIKGDLLDMLLPEAFCTIREASKRILGIRHFDVQIIGGIVLHKGLVAEMKTGEGKTFVGTLPTYLNALPGHGVHVITTNEYLSKRDSKNLRPLYEFLGLSRKTIYAEQILQEKISAYKADITFGTNNDYGFDYLRNNLAYEIKEKFQRKLNFALLDEIDSILIDESRTPLIISGQLDSGTQIYYLIKNIAEKLIINKKNIYKHQQCDFVLDEKQKQVYLTEQGHKYIEFILKSKQIIKSSDSLYSVNNIDFVKKIKAALLALYLFKKNVDYLIINKEIIIVDENTGRVIPGKRWSDGLHQAIEAKEGVKIKQDGNVLAYITLQYFFRLYSKITGMTGTALTEAYEFKKVYKLDVLVIPTNKPIIRKDMNDLIFFSFKEKFEAIVKDIKNKLYKGRPLVVGTTSISFSEYLSCILNFHKISHNVLNANNHSYEANILSKAGRYSTITIATKMAGRGTDITLGGTKQNIFNKHLVKLSGGLHVIGTEHHESRRIDNQFKGRAGRQGEPGSNRFFVALEDTLMRVVCSNRLKKMIQILGLAYGESISHKIVNKALEQAQNNIESHKFAIRKQLLKYEKISSYHRKIVYHQRDAILFNQNFAEYITTTIKEVICKIICDYKNNSNIDKFEDNIKTILNLNIYKWIKKNKYMLSSDTGYIFVKKKLKDKYTTNYIYNCKKFGKQRIKLFEKNTILQIIDIKWKEHLQNMDYIMNSIHLRYYIQKKPIEEYQKEALSLFKAFNINLKVFIISIISQYKNV
>NZ_CP007563.1|WP_040966668.1|177066_179613_-|DNA-gyrase-subunit-A
MLEKYKKFLSIEDEVKQSYLDYALSVIIGRAIPDIRDGLKPVHRRVVFAMHELKNTCNKKHLKSARVVGDVIGKYHPHGDSAVYDAIVRMSQAFSMRYVLIDGQGNFGSIDGDNAAAMRYTEVRLSRITSEFLYDLENDTVNWVDNYDGTEKIPEVLPSRIPNLLLNGTSGIAVGMATNVPPHNIKEVINACLAFIEDKNISIEQLMTYIKGPDFPTSGIIYGTAGIVEAYKTGKGSLNIRAKHIIKKNKLNGTEKLIFTEIPYHVNKARLIEKIVELVKTKKISGIKELRDESDKDGLRVVVEINRYESSKFILNNILAHTQMEVIYSVNMVAVEKGKPKTFNLKEIIEAFINQRQEVLKRRTLYKLKQITKQKQIIEGLIIASSNIDSVIEIIKSASSFKDAKTKLQNVKWKKLKLFNTYFIDSSLLTEFQLKAIMDLRLYRLTSLESKFVLDDYKTTLKKITKLKKILSSFDYFMDWIRKELIEISYKYGDKRKTKITAIQKKISTVDIINEEQIVVTVSKAGFAKIQKNSVYQTQKRGGRGKLITITEKDEDVIEHLLFASNHDTILLFSDKGKVYWLNLYDIHNISRYARGRHLGKLLCLDVNEKITAILAINDEIQKTNNYIFFATALGKVKRTHIKRFNRQRNCGIIALILERGDSLICAAITYGQDNLIMLLDSNGKSIFFKQSEVRTMGRKAMGVLGMRLFSNNKVISLIVINNNKDSHIYYILTVSENGYVKRRKIEAFHLMNRGGHCIIAKCYNNRYGNLVSAIKVKDTDEIILITNRGKLIRTTVKEISCRSRIAQGLTFIRVNNDKFISFTNNRKVYSYKENKTKDKVLKNEQKI
>NZ_CP007563.1|WP_014895058.1|176003_177083_-|bifunctional-chorismate-mutase/prephenate-dehydratase
MNKKFKPYIKYIGNIDYQILKLISHRAKLVSQIQLADDKQNCSYNNGHEDRYFYSIKTSNKGPLSNKVLSKIFKSIVSACLKFKKKSQVAYLGPEGTFTQQAVLKYFGKSIKSIPVKDVFRTIENKIYNYGVVPVENSTEGIVNNTFDSFISSNLKICGEIILSIHHHLLIDKQNINKNIDKIYSHQQSFSQCRDWLKNNYPNAKKIAVASNAEASNLTQYKKNSAAIAGDLAASYYSLIKLAKNIEDRINNYTRFLILSDKDVAPTGYDKTYLMIYINNQIGSFYLLIEPFYRYNINILRLTTRPAPENKGVWNYIIFLEIKGHRKSKLVEKTLEEIYLRGAELKILGSFPEQLTKRI
>NZ_CP007563.1|WP_014943250.1|174678_175998_-|3-phosphoshikimate-1-carboxyvinyltransferase
MKNKVKYIVQRAIKPIKGIIIVPGDKSISHRALMFGSLATGLTKITGFLDGYDSLSTLQSFREMGVEIYGPKQNILCISGAGIYGLKNPKKNIYLGNSGTSMRLLTGLLAGQKFDTKLTGDLSLNKRPMNRVEIPLRLMGAKIKTDKYGVPPVKILGNRLTGINYIMPIASAQVKSCLLLAGIYAKGETKIIEPGCTRDHTERMLKSFGYKIKQKENTISLVGGSKLKASKIKIPADISSAAFFLVAASIIPNSDLLLKKVGINPTRIGVINILRKMGADINLLNEKIYCNEPVADINIKYAKLKGIDIPLNQVPLAIDELPILLVAAANAEGITRLRGASELRVKECDRISAMAKGFKTIGVKTSVYEDGIDIFGTKVYKGGCINSYGDHRIAMSFTIAALKATDVIVIDDCTNVSTSFPNFNLLLTTLGINIKEVKY
>NZ_CP007563.1|WP_014895056.1|173025_174570_-|30S-ribosomal-protein-S1
MSESFAELFEKSLNKINLKPGSIIKAKIVYIDKDWIKVNAGLKSEVKINIDQFKNDKDDVFLKIGDRINVVIETLEDGFGETRLSREKANRLEKWKNLEKAFNNNEVVKGIILGKVKGGFTVDINSIRAFLPGSLVDIRTIRDTLHIEKKYIDFKLIKIDKKRKNIVVSRRAVLEIGNDILKQNISSDQFISKSIKGIVKNITDYGAFIDLGGMDGLLHITDMAWKRVKHPSEIVSLGDEIEVKILRIDIDRNRVSLGLKQLSDDPWKKVKTCYPVGIKVKACITNITEYGCFAEIEDGIEGLVHVSELDWTNKNINPSKLVSIGERVEVMILEIDELRRRISLGIKQCRLNPWENFSLKYKKNDRVNGIVKSITDFGIFVGLNGGIDGLVHVSDISWKDLDEKSIRKNYRKGDTIETRILSIDPERERISLSIKHLKQDPILSFFNYKGSLLNGTIISITDFNSEFDTFVKFFTLFVTKSHYYHLKYKLNDRIECYINSIDQKYRHITMFEVC
>NZ_CP007563.1|WP_014895055.1|169093_169969_-|4-hydroxy-tetrahydrodipicolinate-synthase
MIRGSIVAIVTPMKKNGVIDWASLRNLVKFHLENKTDAILAAGTTGENTTMTLEEHGKVIRTVVKEVNKKISVIAGIGANSTIEAVKLTKMAKDAGAEYGLSVTPYYNKPTQYGMYNHFKEVATVGLPIIVYNVPKRTGVDINNETILKLSLIKNIVGIKESSGNLARALELIEKYKKQDFYLLSGDDSTACEFILAGGHGVISVTSNIVPKLMHELCIASSKGKIELAYKLNKELMPLHYALSLESNPIPVKWALKKMGLVKKGIRLPLTWLATKYKKPLLKTLKSLEVI
>NZ_CP007563.1|WP_014895066.1|194217_194451_-|acyl-carrier-protein
MSNLTKKIKSIVSKQFNINPLFITSTSLFIEDLGADSLDIIDLIMTLEDEFKLEISDEKSKHIKSIQDVVCLLNTFN
>NZ_CP007563.1|WP_014895067.1|194468_194633_-|50S-ribosomal-protein-L32
MAVQKNKKTRSKRGMRRSHSALVLPTLNKEKFTGIIHRRHYIAEDGYYRGKKLF
>NZ_CP007563.1|WP_014895068.1|194643_195588_-|RluA-family-pseudouridine-synthase
MTNYNKYKKIKSILFNQRLDNFLKKKLKGIKTSLVYRLIRKGFIIINNKTVTAKNKLQLGDKIRIPILYINKNQININETLRFSFSNTITYESNDWFIVNKPSGFAVHGGCIGNIGLIDALFLIRKDLNFIYLVHRLDKNTSGCLLLAKSINFLLFINFAFKNKYVEKCYLALVEGAWPIKFTYISAPIKKYKLHQNRVHYNIVNQLGKPSYTFFEICNKFTGFTLIKVFPITGRMHQIRVHTAYLGHPLLGDEKYGSIFGKKFSFYLKLKRLFLHSYFLRFPELKSGYFIQIKTKLDKDLFLVLNRANTYLTY
>NZ_CP007563.1|WP_014895069.1|195688_197323_+|Rne/Rng-family-ribonuclease
MKRILINASQPEELRVALVDGQLLYDLDIEYCNKEQRKSNIYRAKIIRIEQSLEAVFVDFGAKRHGFLPIKEISKEYLLNDCNSNIREIIKEGQELIVQVEKEERSNKGAALTTYISLAGRFLVLMPNNYRSGGISRRITGTDRFKLKEAIKKLFIPKNMGIIVRTAGIGRSSKDLQCDLNYLIQIWEAITEEANKRSAPFLIYRESNVIIRAMRDYLRQDIGEVLIDSVYIYNDALNFIKQVMPTYQKKIKLYKDELPLFTKFKIESQIATAYQREVKLPSGGSIFIDSTEALVSVDINSARATRGDDIEETALHTNLEAADEIGRQLRLRDIGGLVVIDFIDMALTRNQREVENRIRTAFKVDRARIQLCRISRFGLMEMSRQRIRPSLRENSGIVCPRCNGQGTIREVSSLSLSILRLIEEEAMKDNSSKIRAVLPVAIATYLLNEKRNIIVKIEVRQNVKIIIIPEQDMESPHYAVERLRYDQIFGEKYSNKKNLLSKKTTYMEKKIRTEKAAVSIVNHSTVTYNNFITRIWKTLIEKLY
>NZ_CP007563.1|WP_014895070.1|197329_198952_-|MFS-transporter
MLISTKHSLNSQKNNLPNKKNSLFTPLTFKPFRIIWFADLIANLGTWAQSVASVWILTESHASSITLAMIQVVTALPLVLLSIISGVWADNYDRRKLMLLGMVLEFTGGALITSLDFFGFLTSTKLILSILGMSIGASLAVPAWQAAINEQVSKNQVTNAVILNSVNYNFARALGPVIGGILINTVGTAWVFLLNCLCYLGLIWAVWQWKQIYPKRILPPEHIYEGVISALKFAKYSKVMRSVMLRSFVFGLSASALWALLPVFANTKASIYGYMLGALGTGAIVGSAIVNKLCQLVDTNIMISSASILLSIVMLLIGSLNIKLLIFGALMIGGSCWITVLASYNSSVQMLVPDWVKARALALYQTTLYAGLAIGSFGWGHIAGIIKVRLGLLLAGLLLLLTTIALLNLKLPKIDDKHHSIMHQIQPKYKLEFSKYKESIIVSIEYCIPVSNTNDFIDLIIKLRTVRLRNGAKSWSLYRNVEDKEIWQEIFLIRNWLQYLRMLSRITIADKIIIDKVNKMHIGTTPPRTYQGIQQIKPKI
>NZ_CP007563.1|WP_014975162.1|198960_200061_-|3-dehydroquinate-synthase
MKIIKINLLNSKYPIYIGSGLLKKGVYIPYIFGKQIIIITNKKIASLYLDILKKKLLLYNVKVVILPDGEQQKNIASVKHIWDLLIYYGFNRTSTVIALGGGVIGDISGFTASCYQRGISIIHIPTTLLSQVDSSLGGKTGVNHEKVKNMIGSFYQPKAVIIDADLINTLNNRETSSGISEIIKYSLICDYIFFKWLETNIKKLVTLNKTILQFSILKSCIIKCKFFIKDEKEKNIRALLNLGHTFGHAIEQYKGYGNWLHGEAISVGIMIATKVSIEIGRLKASVLYRIYNLLLKAKLPIYVPVGMTSTNFIKLIKLDKKNLYEKTRLILLNRIGKGHIINNINEKFLCTLIDYLPKKIKLVLNR
>NZ_CP007563.1|WP_014943254.1|200047_200569_-|shikimate-kinase
MLLSNVVLTGPMGTGKSTIGKLLSKKLNCKFYDIDKEIENFCGCKIYEFFLLEGESSFRKREHKIIKDLVKKNGIVLSTGGGSIMNSKNIPLLRNKCIIIYLYTSISNQINRLDNTTDRPLLKRNKVNKSIYNIFKNRERIYHYLADIIINTENKLDLIIKEIKKRIVFFENH
>NZ_CP007563.1|WP_014895073.1|200568_200772_-|50S-ribosomal-protein-L31
MKKNIHPKYKNVIIKCSCGNLFNIKSTLKKNLFVEICSHCHPVYCGKQKQLNIGNRIDRFNKQFGKK
>NZ_CP007563.1|WP_014943255.1|200882_201407_+|ATP-dependent-protease-subunit-HslV
MTTIVSVRRNNKVAIAGDGQVTLGNTVVKSNASKVRKVYKGQVLSGFAGSTADAFTLFELFEAQLEKYQGNLIKASVELAKQWRNDRILRRLEAMLAVADKNISLIITGIGDILEPENGIITIGSGGNYAKAVAMALLENTNISAFDIVKKSITIAAEICVFTNKNISIELLDY
>NZ_CP007563.1|WP_014943256.1|201427_202729_+|ATP-dependent-protease-ATPase-subunit-HslU
MTPKKIVEELNKYIIGQEKAKKAVAIALRNRWRRMQLDYKLRSEITPKNILMIGPTGVGKTEIARRLAKMAKAPFIKVEATKFTEVGYVGRDVESIIRDLIEISIKLVKEKANKQIKTKAKYAVEERIIDAILSSKNKENDNIENRKLIINKLRNGELENKEIDIKLTQKVSGIDIMTPPGMEEMANQLQSIFSNINKQTRENRKITIVEARKLLMEEESAKLISDETIKKSAIEAVEQNGIVFIDEIDKIVRRSGDNNGTEISREGVQRDLLPLIEGSSVSTRYGMIKTDHILFIASGAFHLSKPSDFIPELQGRLPIHVELSALSPKDFERILTEPSSALTRQYQALLKTEGITLEFTKEGIQRIAEIAYSFNESTENIGARRLHTVMELLLETPMYKGNEIDHKIIVTKEYVDKIMKKIALKEDYTKYIL

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007563_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007563_3

299553-299646

Orphan

Consensus_repeat	Method
TTTTTTTTCGTTCATTATTCTTTTAAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007563_3

>merge|NZ_CP007563|3|299553-299646|CRISPRCasFinder
TTTTTTTTCGTTCATTATTCTTTTAACTTTTTTCTATTGCTTTGATCTATTTCGCTGTTACTAAATCTTTTTTTTCGTTCATTATTCTTTTAAC

>NZ_CP007563|3|3|299553-299646|CRISPRCasFinder
TTTTTTTTCGTTCATTATTCTTTTAAC	TTTTTTCTATTGCTTTGATCTATTTCGCTGTTACTAAATC
TTTTTTTTCGTTCATTATTCTTTTAAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007563.1\|WP_014943277.1\|292227_292791_-\|peroxiredoxin	unknown	unknown	gnl\|CDD\|211789
NZ_CP007563.1\|WP_014895130.1\|296358_297600_+\|acetylornithine/succinyldiaminopimelate-transaminase	unknown	unknown	gnl\|CDD\|179933
NZ_CP007563.1\|WP_014943273.1\|283952_286544_-\|leucine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234743
NZ_CP007563.1\|WP_014943282.1\|309668_310487_+\|indole-3-glycerol-phosphate-synthase	unknown	unknown	gnl\|CDD\|234710
NZ_CP007563.1\|WP_014943281.1\|308062_308641_+\|aminodeoxychorismate/anthranilate-synthase-component-II	unknown	unknown	gnl\|CDD\|235552
NZ_CP007563.1\|WP_040966660.1\|293538_296187_-\|valine--tRNA-ligase	unknown	unknown	gnl\|CDD\|235582
NZ_CP007563.1\|WP_014943274.1\|286540_287017_-\|rRNA-maturation-RNase-YbeY	unknown	unknown	gnl\|CDD\|237573
NZ_CP007563.1\|WP_014895127.1\|292036_292225_-\|YfhL-family-4Fe-4S-dicluster-ferredoxin	unknown	unknown	gnl\|CDD\|224066
NZ_CP007563.1\|WP_146256543.1\|281365_282586_-\|hypothetical-protein	unknown	unknown	gnl\|CDD\|234701
NZ_CP007563.1\|WP_014943275.1\|290046_291228_+\|tryptophan-synthase-subunit-beta	unknown	unknown	gnl\|CDD\|235288
NZ_CP007563.1\|WP_014943278.1\|297593_299420_+\|elongation-factor-4	unknown	unknown	gnl\|CDD\|235462
NZ_CP007563.1\|WP_014895136.1\|304983_305748_+\|P-loop-NTPase	unknown	unknown	gnl\|CDD\|378455
NZ_CP007563.1\|WP_157677923.1\|305967_306117_+\|hypothetical-protein	unknown	unknown	unknown
NZ_CP007563.1\|WP_016858028.1\|303528_303843_-\|Grx4-family-monothiol-glutaredoxin	unknown	unknown	gnl\|CDD\|188046
NZ_CP007563.1\|WP_014943276.1\|291233_292040_+\|tryptophan-synthase-subunit-alpha	unknown	unknown	gnl\|CDD\|237285
NZ_CP007563.1\|WP_014943279.1\|302432_303515_-\|argininosuccinate-synthase	unknown	unknown	gnl\|CDD\|234785
NZ_CP007563.1\|WP_014943280.1\|306618_308085_+\|anthranilate-synthase-component-I	unknown	unknown	gnl\|CDD\|184146
NZ_CP007563.1\|WP_014895132.1\|300262_301894_-\|chaperonin-GroEL	unknown	unknown	gnl\|CDD\|234573
NZ_CP007563.1\|WP_014895133.1\|301929_302220_-\|co-chaperone-GroES	unknown	unknown	gnl\|CDD\|178988
NZ_CP007563.1\|WP_014895140.1\|308646_309669_+\|anthranilate-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234682

Protein	Function_ID	Function_description	E-value
NZ_CP007563.1\|WP_014943277.1\|292227_292791_-\|peroxiredoxin	gnl\|CDD\|211789	TIGR03137, AhpC, peroxiredoxin. This peroxiredoxin (AhpC, alkylhydroperoxide reductase subunit C) is one subunit of a two-subunit complex with subunit F(TIGR03140). Usually these are found as an apparent operon. The gene has been characterized in Bacteroides fragilis, where it is important in oxidative stress defense. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue. [Cellular processes, Detoxification, Cellular processes, Adaptations to atypical conditions].	3.20696e-111
NZ_CP007563.1\|WP_014895130.1\|296358_297600_+\|acetylornithine/succinyldiaminopimelate-transaminase	gnl\|CDD\|179933	PRK05093, argD, acetylornithine/succinyldiaminopimelate transaminase.	0
NZ_CP007563.1\|WP_014943273.1\|283952_286544_-\|leucine--tRNA-ligase	gnl\|CDD\|234743	PRK00390, leuS, leucyl-tRNA synthetase; Validated.	0
NZ_CP007563.1\|WP_014943282.1\|309668_310487_+\|indole-3-glycerol-phosphate-synthase	gnl\|CDD\|234710	PRK00278, trpC, indole-3-glycerol phosphate synthase TrpC.	5.87198e-91
NZ_CP007563.1\|WP_040966660.1\|293538_296187_-\|valine--tRNA-ligase	gnl\|CDD\|235582	PRK05729, valS, valyl-tRNA synthetase; Reviewed.	0
NZ_CP007563.1\|WP_014943274.1\|286540_287017_-\|rRNA-maturation-RNase-YbeY	gnl\|CDD\|237573	PRK13963, PRK13963, rRNA maturation RNase YbeY.	5.1182e-23
NZ_CP007563.1\|WP_014895127.1\|292036_292225_-\|YfhL-family-4Fe-4S-dicluster-ferredoxin	gnl\|CDD\|224066	COG1143, NuoI, Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion].	2.20945e-05
NZ_CP007563.1\|WP_146256543.1\|281365_282586_-\|hypothetical-protein	gnl\|CDD\|234701	PRK00252, alaS, alanyl-tRNA synthetase; Reviewed.	1.64898e-45
NZ_CP007563.1\|WP_014943275.1\|290046_291228_+\|tryptophan-synthase-subunit-beta	gnl\|CDD\|235288	PRK04346, PRK04346, tryptophan synthase subunit beta; Validated.	0
NZ_CP007563.1\|WP_014943278.1\|297593_299420_+\|elongation-factor-4	gnl\|CDD\|235462	PRK05433, PRK05433, GTP-binding protein LepA; Provisional.	0
NZ_CP007563.1\|WP_014895136.1\|304983_305748_+\|P-loop-NTPase	gnl\|CDD\|378455	pfam10609, ParA, NUBPL iron-transfer P-loop NTPase. This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.	4.3098e-99
NZ_CP007563.1\|WP_014943281.1\|308062_308641_+\|aminodeoxychorismate/anthranilate-synthase-component-II	gnl\|CDD\|235552	PRK05670, PRK05670, anthranilate synthase component II; Provisional.	9.40678e-93
NZ_CP007563.1\|WP_016858028.1\|303528_303843_-\|Grx4-family-monothiol-glutaredoxin	gnl\|CDD\|188046	TIGR00365, TIGR00365, monothiol glutaredoxin, Grx4 family. The gene for the member of this glutaredoxin family in E. coli, originally designated ydhD, is now designated grxD. Its protein, Grx4, is a monothiol glutaredoxin similar to Grx5 of yeast, which is involved in iron-sulfur cluster formation. [Energy metabolism, Electron transport].	1.14535e-51
NZ_CP007563.1\|WP_014943276.1\|291233_292040_+\|tryptophan-synthase-subunit-alpha	gnl\|CDD\|237285	PRK13111, trpA, tryptophan synthase subunit alpha; Provisional.	5.28191e-114
NZ_CP007563.1\|WP_014943279.1\|302432_303515_-\|argininosuccinate-synthase	gnl\|CDD\|234785	PRK00509, PRK00509, argininosuccinate synthase; Provisional.	1.41166e-129
NZ_CP007563.1\|WP_014943280.1\|306618_308085_+\|anthranilate-synthase-component-I	gnl\|CDD\|184146	PRK13565, PRK13565, anthranilate synthase component I; Provisional.	3.72237e-177
NZ_CP007563.1\|WP_014895132.1\|300262_301894_-\|chaperonin-GroEL	gnl\|CDD\|234573	PRK00013, groEL, chaperonin GroEL; Reviewed.	0
NZ_CP007563.1\|WP_014895133.1\|301929_302220_-\|co-chaperone-GroES	gnl\|CDD\|178988	PRK00364, groES, co-chaperonin GroES; Reviewed.	3.7388e-41
NZ_CP007563.1\|WP_014895140.1\|308646_309669_+\|anthranilate-phosphoribosyltransferase	gnl\|CDD\|234682	PRK00188, trpD, anthranilate phosphoribosyltransferase; Provisional.	2.77802e-101

>NZ_CP007563.1|WP_014943278.1|297593_299420_+|elongation-factor-4
MLINTKNIRNFAIIAHINHGKSTLADRLIQLCGGLYKRDFKNQVLDSLDIERERGITIKSQAVTLFYKSKQGKTYRLNLIDTPGHVDFMYEVSRSLYACEGALLLIDASQGIESQTITNFYTAFKRDLTIIPVVNKIDLPQASPKYTISNIKKIFNLHFQSVCCISTKLGLGIKVLLETLIKTIHNPKGDPYKKLLALIIDSWFSKYLGVISLVRIFDGNLKKGDQVIINSTGQSWYIQTVGFYTPKRCLTLKLSAGQVGFFVAGIKDIHGAPVGDTITHANANTDHRISGFKKVKSKIFAGLYPENVKDFKHFSTVLERLALNDASLIYTPENSNVYGCGFRIGFLGSLHLEIIKERIEREHGIKIIITLPSVKYKIKLQTGKIEYIYDPSKLPENYKLFKLYEPIVLARIIVPKIYVGNIIKECITFRGKQLCVVFINNFIKMIYELPMAEVITNFFNRLKSVSKGYASLDYEFYRFKKSNMVRLDILINNNRIEALTMIVPFDKAYKQGQFILKRIKLLLSKQLFDLNIKAVSYKKTLAKTQIKAIRKNVTAKCYGGDITRKKKLIEKQKEGKKRMKSIGNIEIKLNKNIFLSLFKTPNLFDQFS
>NZ_CP007563.1|WP_014895130.1|296358_297600_+|acetylornithine/succinyldiaminopimelate-transaminase
MSINPKTKFKDFYKYILPLYSPQNKIPVKGYGSTIWVQDGRDYIDFSGGIAVNALGHSNPVLLEALKEQSKKVWHVSNSYTNEPSLCLAKKLVKNTFADKVFFCSSGAEANEAALKLSRRYAYNHFGSKKNIIISFKKSFHGRTFFTVNVGGKNNYSHGFGPSPFCIIHAEFNNIHNFRKVINNYTCAVIIEPIQGEGGINVANYSFFKQLRNLCKIYNALLIFDEVQCGMGRIGKLFTYMHFKIKPDIITLAKSIGCGFPLAAMLTTNKVGEAFSIGVHGSTYGGNPLACAVGNIAFDVISNKEVLSGVKRKNKLLKQHIKRINLEFNIFKEVRGLGLLIGIELNKNYINLGRKILKVAFENGLMLLNAGPNVLRLAPSLLISIEEIEEGMSRLYTTIKCIKQNFKYLEYLC
>NZ_CP007563.1|WP_040966660.1|293538_296187_-|valine--tRNA-ligase
MKYNNWHKNWETTKRILNTYTSVPFSIMIPPPNVTGKIHIGHAFEYTLIDTIIRQKGMQGYKTLLQFGTDHAGIATQLLMDKKLSHDKVNRMFLGRKLFLKKTLQWCNKTIPKIILQMKSIGMSVDWKKERFTMDYGFYQAVQEAFIKLYKEGLIYRGKRLINWDPNLLTALSDIEVKNLQDLGKLWYIRYHLLNIHKVEAFCQKKAYLIVATTRPETIFADTCIAVHPFDKRYKAFIGKCVVLPLIGRILPIISEEVVDIKFGTGCVKITPAHNLIDYKIGKRQNSLFINMFNNRFKVRQKAEVCILKSGILLKYNLIKLPKVYVGLSIKSLRKNIVKDLLKNKFLEKKVDNHLLMLPCGDRSCAIIEPLLTDQWFVSIKKLANLAINAVKNGNITFIPKNYEKIYINWMYNLKDWCISRQLWWGHRIPAWYDKNNIIFVGRNEEEIRSKYAINLKTKLNQDQDVLDTWFSSGLWTFTTIGWPQIRTKSFNLFHPSSVLITGFDIIPFWVSRLIMMTLKLINELPFKRIFIHGLIRDKQGQKMSKSKGNVIDPIDVIKGINYGADALRFTFLSISLPGKNINFDLRRFKGYMNFCNKIWNATRFVLSKIELFYNNEYNQFCCWENVTSINKFIISSLQNTKRKILLYFDEYRLDLASQTIYEFFWYDFCDLYLEITKIVFNSNYIGVKISTINTLLYVFKEILLLLHPFIPYITDEIWINIMQVQYKNKHITTTILNQDLPKIDINKLDDNAIYDVNFINIFITKLRCIRSLIYLNKSIKLTVFCSKVKLFYKSLINKYKIYICNLANINIIKYSEPCINCVSKKNQQFFILHIPLLSFCQRNYLVEELQKKKQLLKLSCLKINLKLNTKTSFTAITTNKK
>NZ_CP007563.1|WP_014943277.1|292227_292791_-|peroxiredoxin
MAIINKKIRPFTATAYFNGKFINISNEDLQGKWSVIFFYPADFSFVCPTELLDLSENYSTFKTLGVEIYSVSTDTHFTHKAWHDSSFTVSKIKFPMIGDPSGNISRSFNVFVAETGLAERSTFVIDTECKIKLAEYNAIGIGRNSKELIRKIQAAQYITNHPNEVCPANWTDGSKTFKQNIDFVGKF
>NZ_CP007563.1|WP_014895127.1|292036_292225_-|YfhL-family-4Fe-4S-dicluster-ferredoxin
MSLLITTDCINCDMCELVCPNNAIFPGEEVYVINHDLCNECIGVFPHPQCQQVCPVACIVQP
>NZ_CP007563.1|WP_014943276.1|291233_292040_+|tryptophan-synthase-subunit-alpha
MKLNKRIINCFEQKKRAAFVTFITAGDQDYEKSLTLINSLPKAGADIIELGMPFTDPIADGEIIQKSTQRSLKTGQNQKKTLELVKAFRLFNKKTPIILMGYYNPIYRYGIKKFIKDAKNAQIDGLIIVDLPPEHAQEVSVPANKQGIDFINIITPNTNIKRIPFLVKNSSGYIYYISINGVTGGSVPIFYEVEKAVKLIRKYTNLPIAVGFGVKNRNSVKKLANISDAVVVGSALLKQIEIHCYDQKTAISNVLNLTSRLSRGLVKI
>NZ_CP007563.1|WP_014943275.1|290046_291228_+|tryptophan-synthase-subunit-beta
MNIIPNHKGLFGNFGGRFVSETLIPLIIELEKTYKTAKKDESFRKELAYYQKTYIGRSSPLYLADRLTQALGGAKIYFKREDLNHTGAHKINNCIGQILLAKRLGKNRIIAETGAGMHGVATATVAARLGMKCVIYMGSTDVKRQKENVYRMNLLGAKVVPVNSGKGTLKDAMNEALRDWVNNIETTFYIIGTVAGPHPYPLIVRDFQSVIGKEVREQIIKIEGKLPDILVACIGGGSNAMGLFFPMIKDNTVRMIGVEAGGHGIETGKHAASLNGGVPGVIHGNRTYILQNKDGQIKDAHSISAGMDYPGIGPEHSYYYKCKRIDYVSVTDKEAIEAFKKCCYLEGIIPALESAHALAYVTKIAHSLSNKTTIVLNMSGRGDKDISIIREHS
>NZ_CP007563.1|WP_014943274.1|286540_287017_-|rRNA-maturation-RNase-YbeY
MKKKIKCVYVHMQFIKNNTIKKIVPNESLLSSWFCSFLKPKYKHYKDIVFNIRFVEYKEIIGLNSYYRGFNSLTNIISFSYEALSQRINIQLLGELVITPTLLLYESFKKNKAFIAHCAHIIVHGLLHLIGYNHKNVTDADNMENIEYSNLNKTNIHL
>NZ_CP007563.1|WP_014943273.1|283952_286544_-|leucine--tRNA-ligase
MMYPFSYKKIELEAQNFWYNHNCFEIVEIPNKEKFYCLCMFPYPSGNLHIGHVRNYTIGDVISRSQRMLGKNVLNPIGWDAFGMPAENAAKKNIVSPTDWTNSNIYYMYNQLKSLGFSYNWDRKITTCKIDFYRWEQWFFIKLIEHGVIYKNNAIINWDPLEKTILANEQVINGIGWRSGAKIEHRKIPSWFLKITDYAYELLRCLANIDWPESVKKMQVNWIGKYKGIEVSFKVIGSVPNCYSYLKVFTQRPDTLFGVTYILLAPDHHLVELAAQYNYQIKKLCNTFTFCGKCSLATLKNKELGLYVGYNVLHPITNEILPLYVSSFRYFEYGATASMGVPAHSHRDWDFANTYGLPFKTVVSDINGKVPDISKNAYTDFGFIINSGIFNNITCFEAFDYIFYFIKQYKSGVVKQKIKLRDWGISRQRYWGTPIPVKYGITGKQTPLTDEEIPVYLPKHGCLNSKFNLKKIPSFYVLGNGWVRDTETFDTFIESSWYYARFCCTDNNNSILDARVNYWLPVDMYIGGIEHAILHLMYARFFHKLMRDFGLVDCDEPFKKLITQGMVLTYTYYRESFGIKEWFNPLDVCLLKDKKNGNIIPTVKRDGGIVIRNGIEKMSKSKNNGIDPNVLINRFGADTLRLFVMFSAPTEQVLIWSESGIIGSSRFIKRLWNIVHTYIYISGSEHTIIKLSSLRPDQFNLYRQLQKTIKKATSDMIGRHVFNTVISTVMKLTNLVLHFIDIDSSIIGLAVTREALKSIILILAPIVPHITHVLWKVLGFSYAVIDAKWPSYNKHCMLGQLFTVLAQINGKIRKEIKLPLNYHTKTFASTILSSISIKGYLNCKEIHTLIFVHAKVINIVVSL
>NZ_CP007563.1|WP_146256543.1|281365_282586_-|hypothetical-protein
MQKILNKEGKNINFISENTQGTIILKISSFIFEKGGQVISDVGYIYNKLGKFKVYNVIKHNSLFFHVGTLLKGYFSNTTHVNCYIDKIIRYNISVAHSAIHLLNVTIQRVAKKKLIKKGFFINQNKIIFEYKSYKPLTNKILFIIELLINRAIAKQHIILIKLLSKQKKNIKHKNVVVIGKEGGYSIDVCNGTHIKTTKNIGCFCIMSEQCVSKGIRRIEAVTNKNAVRYILKNKLTLKDLSFASNLCLNNVKKNIKHLKNKNKVLLDELNLFKQITIQKQINKLLSKMFYFFGYKFLIYKIKSKYKKDLFVILHSIVNKLVNKSIIIVYVLNKHNINVFIKITNDCLKFRPYSVFFKQVLQTNKTIFYNATTNVSYLKTSINNFNMLYTKTLKTNIKTFLFKRGL
>NZ_CP007563.1|WP_014895132.1|300262_301894_-|chaperonin-GroEL
MAAKQIRFSEDARTRMVRGVNALADAVKTTLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELKDKFENMGAQMVKEVASKTADVAGDGTTTATVLAQAIVNEGIKQINSGRSPMDLKRGIDKAILASVEEIKKLSVKCTDSRSIAQVGTISANGDSNIGQLIAKSMEKVGKKGVITVDESRGFEDELEVVEGMQFDRGYISPYFVTNQENMTVELESPYILIVDKKISNIRELLHLLENVAKSGKPLMIIAEDIEGDALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDLAILTGSTVISDEIGLNIEKVTIKNLGNARRITMSKENTTIIDGAGSERDIESRVKQIRKQIEETTSDYDKEKLQERVAKLSGGVAVIKVGAATEIEMKEKKARVEDALHSTRAAVEEGVVAGGGTALIRILNKLQNLKGNNEDQTHGIKIALKAFEAPLRQIVNNAGEEASVIINKVKEGVGNYGYNVSTGEFGDLINMGVLDPAKVTRTVLQSAGSIGGMIITTEAMIADHQDENNKMPHSTDGVNGMRS
>NZ_CP007563.1|WP_014895133.1|301929_302220_-|co-chaperone-GroES
MKIRPLHDRVVVRCIEVEQKTSGGIVLPGNAQEKQNRGEVVAIGKGKILNNGAIRPLDVKIGDTVIFKESFGVEKQKIEDEEVIIMSESDILGILE
>NZ_CP007563.1|WP_014943279.1|302432_303515_-|argininosuccinate-synthase
MSKKVILAYSGGEKQSVIANWLQCNYGYEIITFTADLGQEKKKIELAYKKAKVLGIKKMYIEDLKESFVTKYICHRFRANTIYECGKKIGASIVRPLIIKRLIEIAKLNKTTNISYGTTKKSKDLIRLDLSTYSLNPYIKIIAPWRDLNFLSQNKLRTYFKKKKFSNEFVQKHKISCSVNNDFLHIFSKCGCLDNTWNEAKKKRCILSNFFKNTPDKPTYIDITFKQGNPTSINSEVLKSHEIMIKLNNLGSKHGIGRVNKIRYYGSGLKARCCYENPGVTIFYHAHRAIESFTLDHEILQIKDILMPLYAEKVYTVNLWTKEIKMLKALIDTSQKYVNGIVRIKLYKGNVVIIGIKSDQ
>NZ_CP007563.1|WP_016858028.1|303528_303843_-|Grx4-family-monothiol-glutaredoxin
MKNKTIEIIKNQIKKNKIILYMKGTPNLPQCGYSAQAVKFIKKYLNRFKYINVLESVHIRHELPKWSKWPTFPQLWINSKLIGGSDIIFEMYKTGELKRLIKKR
>NZ_CP007563.1|WP_014895136.1|304983_305748_+|P-loop-NTPase
MININYIIAIASGKGGVGKSTITANLALAMNVKGYKVGLLDADIYGYSQSTILNVKKKIFINKKKRIQPIPYYGIKAMSLGFIVKKQTKAIIGRGPIISKLLVDLFTNTNWGYLDYLFIDMPPGTGDIMLSISKSISVSGVIIITTPQDVSLLGAFKGINMFNKIKIPIIGLIENMSYYTCKSCGYSTSIFNNKYNNILKKYKIKKIGCFALHKTLCDKKPILIAKPNSKISVFLKVIADIVDIKLKPQFRIGL
>NZ_CP007563.1|WP_157677923.1|305967_306117_+|hypothetical-protein
MSYEVQIGIYLHKELDINKIHVERIKVKDNKIIVVPILCACLSMMMNIQ
>NZ_CP007563.1|WP_014943280.1|306618_308085_+|anthranilate-synthase-component-I
MKRILIYKEIISDLDTPLSLYMKVANYHWTFLLESIEGKKQWCRYSIIGLRCHQRIEIYNNKINLFKDKIKIEKTKKIDTLVWLSNYIKTIKKTILKKNKSKTILDGGLVGYLGYDIIRLIEPTIKTYKQYNPINTPDIFLLRANELLIIDKYSGRLTILVNVNIYDLKKGLERIKIILKKLSLCANFNKTELVTHSFQTHIKHKYTLKPIFSSFNKFTFQNYIINLQKYINSGDVMQCVPSQRIIIPFYSQPFNLFRALRVLNPSPYMLFFNFNDHYVVGSSPEILVRVDNKTITLRPIAGTIQKRSGIHNEILKDYKEVSEHIMLIDLGRNDVGKVSSTVRVQNQFLIERYSHVRHIVSTLIGILKHKIDLIDIVRATFPAGTIAGAPKIRALEIINTLEPIRRGIYSGAIGFLSWNGNMNIAIAIRTAIVKNYKLHIQAGVGIIEESQYKKEWNEILNKSSVILKAALIAIVEEKGDKVENINYR
>NZ_CP007563.1|WP_014943281.1|308062_308641_+|aminodeoxychorismate/anthranilate-synthase-component-II
MRILIIDNYDSFTFNIVHYFFELGVDVNILRNNLNIKNIENGYFTHLVISPGPCTPNKAGFSIEVIKHFANKIPILGICLGHQIIGQVFGCKMRKSTQLFHGKTSRIKHINKGLFKGFKTPILINRYHSLIIDRKYLPDNLEVTAQTDCYDITPNVIMGIKHKQYNIEGLQFHPESILSFKSHGLLKNFIKK
>NZ_CP007563.1|WP_014895140.1|308646_309669_+|anthranilate-phosphoribosyltransferase
MINTILNKLINKRNIKFNQFYKIMKVINFGKIKSTQLASILTALSIKKETSDEIAATAKVINDYYSFNIHNNKVMDLVGTGSDNFNFFNISTSSSFVVAAAGSINVAKFGSKSISSYSGSLDLLNVLGINLYLKKKDIRKCIKRLQLVFLISEFKYKKKIRKIRMDIRIPTIFNIVGPLTNPIKPFKQLVGVYDRRLLNIFSKVFMKLGSKKTLIIHSKEGSDEISLNKATYISELNNGKIINFLINPTKFFLKKNTLDFIQIKSVLQSLDIVIHSIKGHFGLAFEMILLNAGTALYVSGIVNNIHNGLELSKYILISGKAYKKLKTIVFFTKCFKKGIL
>NZ_CP007563.1|WP_014943282.1|309668_310487_+|indole-3-glycerol-phosphate-synthase
MKILFNILKYKRNTINVCINKLSLKILRKGFYSNKEQFSNNKFIKSIKNKQYKNQTSIIAEIKRCSPSKGIITETKNIEKLALNYFLNGAVCISILTEKNFFKGSKKYILTVKKLFDIPILFKDFIIDEYQVFEARLLCTDCILLIVSILKLDLLKKLYNLALSIGLDVLLEIHNLLELEVALFSLNAKFIGINNRNLYTFNTSINITISLLKYMPSNVVFVTESGILNVNDFIKLQRFGVNVFLIGEFLLSNNDIFLRTLLDKANKYILTY

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Crispr_ID: NZ_CP007563_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_CP007563_4

338278-338364

Orphan

Consensus_repeat	Method
TAACTACACAAAAACATAAAACACA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_CP007563_4

>merge|NZ_CP007563|4|338278-338364|CRISPRCasFinder
TAACTACACAAAAACATAAAACACAGCACGTAATATCTAATTACTAACATAACTTTTTAAATTAACTACACAAAAACATAAAACACA

>NZ_CP007563|4|4|338278-338364|CRISPRCasFinder
TAACTACACAAAAACATAAAACACA	GCACGTAATATCTAATTACTAACATAACTTTTTAAAT
TAACTACACAAAAACATAAAACACA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_CP007563.1\|WP_014895156.1\|331981_332992_-\|AI-2E-family-transporter	unknown	unknown	gnl\|CDD\|223701
NZ_CP007563.1\|WP_014895152.1\|322127_322556_+\|50S-ribosomal-protein-L13	unknown	unknown	gnl\|CDD\|181703
NZ_CP007563.1\|WP_014895155.1\|326409_328959_+\|DNA-mismatch-repair-protein-MutS	unknown	unknown	gnl\|CDD\|235444
NZ_CP007563.1\|WP_014895171.1\|349002_349356_+\|50S-ribosomal-protein-L19	unknown	unknown	gnl\|CDD\|235418
NZ_CP007563.1\|WP_014895154.1\|323351_324410_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase	unknown	unknown	gnl\|CDD\|223352
NZ_CP007563.1\|WP_014895167.1\|346699_347191_+\|acetolactate-synthase-small-subunit	unknown	unknown	gnl\|CDD\|183365
NZ_CP007563.1\|WP_014943285.1\|332998_333943_-\|homoserine-kinase	unknown	unknown	gnl\|CDD\|270702
NZ_CP007563.1\|WP_014895169.1\|348248_348497_+\|30S-ribosomal-protein-S16	unknown	unknown	gnl\|CDD\|223306
NZ_CP007563.1\|WP_014895151.1\|321485_322112_+\|ATP-phosphoribosyltransferase	unknown	unknown	gnl\|CDD\|234971
NZ_CP007563.1\|WP_014895163.1\|339373_339961_-\|imidazoleglycerol-phosphate-dehydratase-HisB	unknown	unknown	gnl\|CDD\|234873
NZ_CP007563.1\|WP_040966662.1\|342167_342812_-\|MarC-family-NAAT-transporter	unknown	unknown	gnl\|CDD\|236814
NZ_CP007563.1\|WP_014895159.1\|335005_335779_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	unknown	unknown	gnl\|CDD\|234996
NZ_CP007563.1\|WP_014943289.1\|347212_348229_+\|ketol-acid-reductoisomerase	unknown	unknown	gnl\|CDD\|235491
NZ_CP007563.1\|WP_014943290.1\|348505_348814_+\|16S-rRNA-processing-protein-RimM	unknown	unknown	gnl\|CDD\|274061
NZ_CP007563.1\|WP_014895160.1\|335808_336525_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	unknown	unknown	gnl\|CDD\|179108
NZ_CP007563.1\|WP_014895153.1\|322582_322966_+\|30S-ribosomal-protein-S9	unknown	unknown	gnl\|CDD\|178888
NZ_CP007563.1\|WP_014895158.1\|333950_334994_-\|histidinol-phosphate-transaminase	unknown	unknown	gnl\|CDD\|235440
NZ_CP007563.1\|WP_014895162.1\|338741_339362_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	unknown	unknown	gnl\|CDD\|223196
NZ_CP007563.1\|WP_014943288.1\|344950_346693_+\|biosynthetic-type-acetolactate-synthase-large-subunit	unknown	unknown	gnl\|CDD\|180578
NZ_CP007563.1\|WP_014943286.1\|340874_341804_+\|RluA-family-pseudouridine-synthase	unknown	unknown	gnl\|CDD\|223638

Protein	Function_ID	Function_description	E-value
NZ_CP007563.1\|WP_014895156.1\|331981_332992_-\|AI-2E-family-transporter	gnl\|CDD\|223701	COG0628, yhhT, Predicted permease, member of the PurR regulon [General function prediction only].	3.23413e-09
NZ_CP007563.1\|WP_014895152.1\|322127_322556_+\|50S-ribosomal-protein-L13	gnl\|CDD\|181703	PRK09216, rplM, 50S ribosomal protein L13; Reviewed.	2.17825e-66
NZ_CP007563.1\|WP_014895155.1\|326409_328959_+\|DNA-mismatch-repair-protein-MutS	gnl\|CDD\|235444	PRK05399, PRK05399, DNA mismatch repair protein MutS; Provisional.	0
NZ_CP007563.1\|WP_014895171.1\|349002_349356_+\|50S-ribosomal-protein-L19	gnl\|CDD\|235418	PRK05338, rplS, 50S ribosomal protein L19; Provisional.	2.48959e-53
NZ_CP007563.1\|WP_014895154.1\|323351_324410_+\|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase	gnl\|CDD\|223352	COG0275, COG0275, Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis [Cell envelope biogenesis, outer membrane].	3.61677e-53
NZ_CP007563.1\|WP_014895167.1\|346699_347191_+\|acetolactate-synthase-small-subunit	gnl\|CDD\|183365	PRK11895, ilvH, acetolactate synthase 3 regulatory subunit; Reviewed.	5.79128e-82
NZ_CP007563.1\|WP_014943285.1\|332998_333943_-\|homoserine-kinase	gnl\|CDD\|270702	cd05153, HomoserineK_II, Type II Homoserine Kinase. This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a Protein Kinase fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine. The Type II homoserine kinase subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K).	2.0145e-101
NZ_CP007563.1\|WP_014895169.1\|348248_348497_+\|30S-ribosomal-protein-S16	gnl\|CDD\|223306	COG0228, RpsP, Ribosomal protein S16 [Translation, ribosomal structure and biogenesis].	2.5862e-32
NZ_CP007563.1\|WP_014895151.1\|321485_322112_+\|ATP-phosphoribosyltransferase	gnl\|CDD\|234971	PRK01686, hisG, ATP phosphoribosyltransferase catalytic subunit; Reviewed.	1.20814e-92
NZ_CP007563.1\|WP_014895163.1\|339373_339961_-\|imidazoleglycerol-phosphate-dehydratase-HisB	gnl\|CDD\|234873	PRK00951, hisB, imidazoleglycerol-phosphate dehydratase HisB.	1.2667e-91
NZ_CP007563.1\|WP_040966662.1\|342167_342812_-\|MarC-family-NAAT-transporter	gnl\|CDD\|236814	PRK10995, PRK10995, MarC family NAAT transporter.	4.98139e-62
NZ_CP007563.1\|WP_014895159.1\|335005_335779_-\|imidazole-glycerol-phosphate-synthase-subunit-HisF	gnl\|CDD\|234996	PRK02083, PRK02083, imidazole glycerol phosphate synthase subunit HisF; Provisional.	6.8689e-154
NZ_CP007563.1\|WP_014943289.1\|347212_348229_+\|ketol-acid-reductoisomerase	gnl\|CDD\|235491	PRK05479, PRK05479, ketol-acid reductoisomerase; Provisional.	0
NZ_CP007563.1\|WP_014943290.1\|348505_348814_+\|16S-rRNA-processing-protein-RimM	gnl\|CDD\|274061	TIGR02273, Ribosome_maturation_factor_RimM, 16S rRNA processing protein RimM. This family consists of the bacterial protein RimM (YfjA, 21K), a 30S ribosomal subunit-binding protein implicated in 16S ribsomal RNA processing. It has been partially characterized in Escherichia coli, is found with other translation-associated genes such as trmD. It is broadly distributed among bacteria, including some minimal genomes such the aphid endosymbiont Buchnera aphidicola. The protein contains a PRC-barrel domain that it shares with other protein families (pfam05239) and a unique domain (pfam01782). This model describes the full-length protein. A member from Arabidopsis (plant) has additional N-terminal sequence likely to represent a chloroplast transit peptide. [Transcription, RNA processing].	1.75806e-19
NZ_CP007563.1\|WP_014895160.1\|335808_336525_-\|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase	gnl\|CDD\|179108	PRK00748, PRK00748, 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated.	3.71551e-101
NZ_CP007563.1\|WP_014895153.1\|322582_322966_+\|30S-ribosomal-protein-S9	gnl\|CDD\|178888	PRK00132, rpsI, 30S ribosomal protein S9; Reviewed.	5.0145e-65
NZ_CP007563.1\|WP_014895158.1\|333950_334994_-\|histidinol-phosphate-transaminase	gnl\|CDD\|235440	PRK05387, PRK05387, histidinol-phosphate aminotransferase; Provisional.	1.15666e-177
NZ_CP007563.1\|WP_014895162.1\|338741_339362_-\|imidazole-glycerol-phosphate-synthase-subunit-HisH	gnl\|CDD\|223196	COG0118, HisH, Glutamine amidotransferase [Amino acid transport and metabolism].	5.20603e-79
NZ_CP007563.1\|WP_014943288.1\|344950_346693_+\|biosynthetic-type-acetolactate-synthase-large-subunit	gnl\|CDD\|180578	PRK06466, PRK06466, acetolactate synthase 3 large subunit.	0
NZ_CP007563.1\|WP_014943286.1\|340874_341804_+\|RluA-family-pseudouridine-synthase	gnl\|CDD\|223638	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis].	1.74436e-65

>NZ_CP007563.1|WP_014895160.1|335808_336525_-|1-(5-phosphoribosyl)-5-[(5--phosphoribosylamino)methylideneamino]imidazole-4--carboxamide-isomerase
MLIIPAIDLKNGKCVRLKQGRMYKTTDYGDPLKVVQRFVKIGIKRLHVIDLNGAVLGEPVNKYIINKLIKHYPNLILQIGGGIRNSATIKKYLDVGIKYVIIGTLAIKKPHRLYNLCKKFGKHIILSIDSYKGYVAIDGWKKIANIKSTELAKNVSNCGISSIIYTDISRDGMMQGLNLKKTIKLANFAKIPIIASGGLNNVFDIVNLKTNKNTFILGTIIGRAFYEGKIDLYKALLI
>NZ_CP007563.1|WP_014895159.1|335005_335779_-|imidazole-glycerol-phosphate-synthase-subunit-HisF
MSLSKRIIPCLDIDCGKVVKGIKFENTRYAGDPLKIAKFYNEQKADEIALLDIKASYSGKNNTIEVVKKIANEIFIPLTVGGGIKTCKNIRELLNAGADKISINTAAVLNPKIVREASDKFGSQCIVVAIDAKRKTNKNIKEDWEVLTYGGRKNSGISAIDWACKMVKYGAGELLITSIDRDGTKRGFDINLIKTISQRVNVPIIASGGVGNLDHFVEGIKTGKADAVLAASIFHFGEYTIDKAKKYMAKKGISVRF
>NZ_CP007563.1|WP_014895158.1|333950_334994_-|histidinol-phosphate-transaminase
MRMSYKINKLHPYTPGEQPYKKMIKLNTNENPYPPTPKINKLLKNFNYYKLRLYPDPTTSKLRKIIAKVYNVKSEQIFIGNGSDEVLALAFMTFFCQKLPLLMPTITYSFYPVYCKLYNIRYKTIPLQNKFEINLKKMNISNGGIIFANPNTPTGHAISYIEVNKLLDIHNEYVVLIDEAYIKFGSESAIPLIKKYKNLLIVNTLSKAYSLAGIRIGFAIGSTYLIKGLEKVKNSFNSYPIDVISELIAIEAIKDIKYLKKICNYIIYIRETLSKQLKDVGFTVLPSKANFMLVKPNNISAKTMFIKLRNHGILLRYFNNIKKYIRISIGTIQQMNYLIETIKYILK
>NZ_CP007563.1|WP_014943285.1|332998_333943_-|homoserine-kinase
MAVFTKIKKQKLSLFLKSFNIKKQIKFKEVKQGTENSTFFIQTETKKFVLTLFEQGSYKDLTGFIDLLKFLYEHCLPIAMPLIDKNNIIIKKLSGKHALLFPKLYGIHPRTQNIEQCSIIGKTLGRLHSISNKFKLKKQNLRDINWIVLNYYKVISLLTKEDQELMFNQIYLLKHIVTNLPQGILHGDLFRDNTLFNGNNICGLIDFYNGCTGDLIFDLAILINDWCSDQHGNLLEDKYKAILNHYVLERPFTKEEVYILPKMLRLTALRYWISRLLVKNIFPVTHNLRHKEPKKYRDILVSHCKNQYPLYFKN
>NZ_CP007563.1|WP_014895156.1|331981_332992_-|AI-2E-family-transporter
MNNYMLTRATVISLLIYFMGLLLIFPLHLLPCLLSGLFVFELVKAITPLLQTLIPVNKARLSSVVLLGASIVTILSLFFFTVISFILQDIKTPDNLIQRYMLIFDKARHQLPHSVVIYLPESADELSQIINELIYKHVNELQFVFGCAIHTCFSLLSGMILGAIIALQDIPDIKSLTPLTYALLQRSITLSNAFHNVVFAQLKISLVNTLLSSILLLICAPCLNVYIPLTKTLILITFIMGLIPLIGNLISNILIFIVSLSVSLWTAVIALTYLIAIHKLEYFLNARIIGLRINSNAWELLFAMLFFDAAFGFSGLIAAPMYYAYFKCELTNEKVI
>NZ_CP007563.1|WP_014895155.1|326409_328959_+|DNA-mismatch-repair-protein-MutS
MKTKIKKNIYNATPAITQYLRIKNHYHKILLMYRMGDFYEFLFEDAHTASALLNIQLTSKGKYNNKRIPMAGIPCHSLRTYLKRIITAGISVAICEQIKTKKTKKSKLLERKVIRVITPGTLYEDSLLDESKDNLIISIIQKNNKWGISWLEFTTGAFGVLEVDNIHDLRLELDRLNPVELLISRLHKKLPKLPVHKSIIKPISDINFDYNNACKVLFKKLNIKNINKKLNAGVSAAGAIIQYINNNKIYNLAHINHLIFENKKDKLKIDRITKKHLELDVNVNGKQENTLFSVLNNTMTHMGSRLLKKWINNPITNYDLVFSRQKGVEIVLTNNFIDILQKYIKKIGDIERIVTRISLKTAKPLDLIKFKIALNVFPKLKTLLKGLLIVNKNSKSILNYIHKEIFTFPNIALLLDEALVDNPPNSFRYGYVIKSHFNKNLDKLRKIYTNSEKFIKTFENKEKLRTGIIKLKVTYNKLHGLFIEIPKGRKHKYKIPKNYIRTKTLKNSERFYTSELKYFEKRLIESKEKSIKYEKSIFKKLIKVLVGNIPYFIKTSKSLATLDVITTFAERALTLNYCKPIINKNKIGIKIMEGRHPVIESTTNHHFVPNNLFLNHNKSIHIITGPNMGGKSTFIRQIAIIVLLTYIGSYVPAKYAEIGPIDQIFTRIGGYDDLSAGKSTFMIEMHETAKILNTATFKSLVLMDEIGRGTNPTEGLCLAWACLERIIQIKALTLFSTHYFSLTQIAKKFKQITNLHFSASIKSNKVSYIYNIQKGATNNSYSSSVASLANIAQGVINKSNNLIKHFQDHQKSLNKRHTLMKYIKSFKYKDLTRYLKFIKSFFKNLKDMF
>NZ_CP007563.1|WP_014895154.1|323351_324410_+|16S-rRNA-(cytosine(1402)-N(4))-methyltransferase
MTHKSLFFNKAIDYLITNKDGLYIDCTLGLGGHSKQILNRLSINGLLIALDNDLNTKTLVKNLEFYLDKRFSFININFKYLEIIAKKKHLFGIVSGILLDLGISTYQIKDYKRGFSFFINGPLDMRINNTFGITACCLLNHYKFKQIFKIFKTYGEDEQLYRLTVEICNRRHHFPFKMTLELSNLIKTLKFTNYHIKHQLIKTKPKIQKTYIIHHKSIKIKQKFIKHSKSINTKHIIIKENTTKNKIIKTNNNSINKKKKKHIHPSTKIFQAIRSYINNEIQNLEIVIITSLKLLKTNKKLIIITFNSLESQIVNKVLKTTLNKVNKIYPSIEEVFYNNSSRCSAIFIIQKL
>NZ_CP007563.1|WP_014895153.1|322582_322966_+|30S-ribosomal-protein-S9
MYFYGTGRRKTASARVFLKIGNGKFIINNNTLKKYFHNINLYYLMIQPLELTNNVNTFNIKITVNGGGVKSQAEAIRHGISRALVAYNNNLRYKLRLNGYLKRDSREVERKKIGFKKARKSPQFSKR
>NZ_CP007563.1|WP_014895152.1|322127_322556_+|50S-ribosomal-protein-L13
MKTLNVKINDLKTEWYIINAYNKKLGRLSTKIVHFLLGKNKVIYNSYLNIGDNIIVINADQIKITGNKLIQKKYYYHTGYPGGLRKTTLLELMKKNPEKVIKQSVKGMLPKNSLGRLISKKLKIYKGKQHPHISQQPLELLI
>NZ_CP007563.1|WP_014895151.1|321485_322112_+|ATP-phosphoribosyltransferase
MIEPLVIALSKGRILFKSLSLLKKAGIIPIESVENNRKLLFNTKKKYLNLIILRAIDVPTYVKLGAADMGIVGKDVLLENGSKGLYEPIDFKISKCRLMTAGLIGFNVKNTTRKVATKFVNIAKRYYASKGIKANIIKLYGAMELAPIMNLAEEIIDIVDTGNTLKENGMEPKTLIKNISTRLIVNKTSMIIKYKSINPLIELLISII
>NZ_CP007563.1|WP_014895162.1|338741_339362_-|imidazole-glycerol-phosphate-synthase-subunit-HisH
MAIIIIDYGIGNLYSVANAIKKVTKEKVYITNDAKKIKLSNRIILPGQGAIKDCIKELKKKELYWLLKEIINTTNKPVLGICIGQHLLMESSEENKGVFGINYIKGIVKNYKNKNFKIPHTGWNIVYKHKEHQIWNGIKSGSRFYFVHSFYVKTRFKNNVLGVTEYGGKCANVITYYNSVITVQFHPEKSSSLGLKFLKNFINWLP
>NZ_CP007563.1|WP_014895163.1|339373_339961_-|imidazoleglycerol-phosphate-dehydratase-HisB
MSVNKKKKYRTANIYRETKETKIRVYVNLDGQGKINIKCGIELLEHMLDQITNNGQIDLTIKTNVYSHIDHHHTIEDIGIAMGKAFKKALGKKIGIKRYGCSYVPMDESLSRVVIDLSGRPSLHMTKVGKFDLFREFFKGWVNNCKSTLHIDILKGFNSHHQIESIFKSFGISIRKAITKDKRITNKLYSTKGTL
>NZ_CP007563.1|WP_014943286.1|340874_341804_+|RluA-family-pseudouridine-synthase
MKTIKCLLSIRKGLRLDKTSRKLFYITREKIKTFIKKKIRLDGFTVKQNIFLNKFKWISLIHYTKLYIVERVFEPDYFYKNYENNEILVINKRFGLVVHPSKSNIKGTLVNAILSYKKTDFINLPRAGLVHRIDKDTSGLVIIAKNLVSYRDLKTKIKEKSIIREYDVVVLGQLDIGGYINSQIGRNIKYRKKKNIVNDEGKIAITHFRVLERFNTHTYLRCWLETGRTHQIRVHMQSISRAVIGDELYLNNKILPNLNIRQALHAHCLILKHPSKQIYIKLLAKLPKDMTLLLALLRTNKIHTISHTL
>NZ_CP007563.1|WP_040966662.1|342167_342812_-|MarC-family-NAAT-transporter
MFIEYIHSVLFFFITLLPVANPIASTTLLLTLGNKIKAKERKKQIYFATLYVGIIILVCFYAGKNILNAFGVSINALRLAGGIILLYFGFDLLFNVTEKKQITEKNHLQQSHLNISFVPLALPGTAGPGTIALIISSSSSLPSSCLIHFVIWSVTALFTLMFLICLLSANKIFKRIGPSGIDAISRIMGFILISMGVQFIITGFQNMLIVLFHL
>NZ_CP007563.1|WP_014943288.1|344950_346693_+|biosynthetic-type-acetolactate-synthase-large-subunit
MELLSGADMIIRFLKDENVKYVYGYPGGAALHIYDALFRQKVVKHILVRHEQAATHMADGYARASVKPGVVLVTSGPGATNAVTGIATAYMDSIPMVILCGQVVSKLIGEDAFQETDIVGVTRPIVKHSFTIRDTADIPTILKKAFYIASTGRLGPVLVDIPKDMTAPNELYEYIKQNDIKLREKKKNVCNNKEFIKKALKLLLKAKKPVLFVGGGAITGKASHKIREFANIAYLPVVTSLMGIGAYPQSDFQYIGWPGMHGSYEANNAMHNSDLIFCVGARFDDRVTNNTEKFCPNAKVIHVDIDPCSISKTILADIPIIGSAKKVVKELLSKINKSYKDEINLENRKKHLEIWWKCINKWIKNRDGKLYKPVTALSRDLIKPQQVIEAVYKKTKGEAIIATDVGQHQMFAAQYYKFNKPNKLITSGGLGTMGFGLPAAMGVKLSYPHENVVLITGEGSFQMMMQELSTCKQFDISLKIIHLNNGSLGMVRQWQDINYKARHANSYVESLPEFHRLFEAYGLNAITVKVIEELESALETVFINKNELVFLNIYIDPLEHVYPMQKPLGAINDMIISKAE
>NZ_CP007563.1|WP_014895167.1|346699_347191_+|acetolactate-synthase-small-subunit
MRHIISILLENEPGALSKIVGVFSQRNFNIETLNVAHTEDITLSRLTLTTNGDACVIEQIIKQLNKLVDVVKILDLTEVSHIARELMLVKVKAEADDRRAEIKRITDIFRANIVDVTTTDYIIQITGDEDKLDAFINALKGINEVVRTGVSGIPRVWVKVKLS
>NZ_CP007563.1|WP_014943289.1|347212_348229_+|ketol-acid-reductoisomerase
MKIYYEKDCNRSLIKQKRVVVIGYGSQGHAHANNLKDSGVNIKVALYKGSRSWKKAEVAGLKVEVIEKAIIDADIVVMLVPDELQKNIYYRYVENNIKSGAVLIFAHGFNVHYQQIEPRQDIDVVLVAPKAPGHTVRTTYMQGGGVPSLIAIYKDNSGKAKDIALSYASAIGCGKTGIIQTTFKEETETDLFGEQAVLCGGVSALITAGFEVLVEAGYSAEMAYFECLHELKLIVDLIYEGGLGDMRYSISNTAEYGDYVSGHKIINNDTKKNMKTLLENIQNGKFAKDFIIEKKTGFTLLKTKRRINSEHKIEKVGKVLRSMMPLICKNKIIDKNKN
>NZ_CP007563.1|WP_014895169.1|348248_348497_+|30S-ribosomal-protein-S16
MVKIRMTRCGCKNRPFYQINVKDSRSSRDGKFIEKIGYYNPLVISEKRFCINSSRLGYWKNKGAKISNRVLSLLKKNKKDKK
>NZ_CP007563.1|WP_014943290.1|348505_348814_+|16S-rRNA-processing-protein-RimM
MGSIAKSYGVKGWIKVNSYTNQRCNIIDYSRLWILEIKGKNIYLKVKRIRLVHRFFIVQLYGIKTCEKAKTLIGSLIKLQKKLLPNLQKGEYYLYQFKNLRV
>NZ_CP007563.1|WP_014895171.1|349002_349356_+|50S-ribosomal-protein-L19
MSINQLIQAIELEQMKTKIIPKFMTGDTVIVQIKVLEGSIERLQAFEGLVIGKRNRGLNSSFTVRKVTSGIGIERTFKTYSTCIFSIKINRKGKVRKSKLYYLRDLKGKSARINNIS

You can click texts colored in the table to view more detailed information

Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity
NZ_CP007563_2	2.3\|193836\|15\|NZ_CP007563\|CRISPRCasFinder	193836-193850	15	NZ_CP007563.1	259198-259212	1	0.933

1. spacer 2.3|193836|15|NZ_CP007563|CRISPRCasFinder matches to position: 259198-259212, mismatch: 1, identity: 0.933

gagttgtatggaaga	CRISPR spacer
gagttgtatagaaga	Protospacer
*********.*****

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity
NZ_CP007563_1	1.1\|133443\|32\|NZ_CP007563\|CRISPRCasFinder	133443-133474	32	NZ_KU295134	Escherichia coli strain BK32602 plasmid pBK32602, complete sequence	40502-40533	7	0.781
NZ_CP007563_1	1.1\|133443\|32\|NZ_CP007563\|CRISPRCasFinder	133443-133474	32	NZ_CP020059	Escherichia coli strain AR_0061 plasmid unitig_1, complete sequence	24278-24309	7	0.781

1. spacer 1.1|133443|32|NZ_CP007563|CRISPRCasFinder matches to NZ_KU295134 (Escherichia coli strain BK32602 plasmid pBK32602, complete sequence) position: , mismatch: 7, identity: 0.781

-aacatcacctcttaaatcttaaaagcaacctt	CRISPR spacer
tcacatt-ccttttaaatattaaaagcaaccca	Protospacer
  ****. ***.****** ************.

2. spacer 1.1|133443|32|NZ_CP007563|CRISPRCasFinder matches to NZ_CP020059 (Escherichia coli strain AR_0061 plasmid unitig_1, complete sequence) position: , mismatch: 7, identity: 0.781

-aacatcacctcttaaatcttaaaagcaacctt	CRISPR spacer
tcacatt-ccttttaaatattaaaagcaaccca	Protospacer
  ****. ***.****** ************.

Prophage detection

Region	Region Position	Protein_number	Hit_taxonomy	Key_proteins	Att_site	Prophage annotation

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage