CRISPRimmunity

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Overview of predicted results

Overview of the results

Contig_ID	Contig_def	CRISPR array number	Contig Signature genes	Self targeting spacer number	Target MGE spacer number	Prophage number	Anti-CRISPR protein number
NZ_AP014522	Pseudomonas protegens Cab57	5 crisprs	DinG,csa3,cas3,PD-DExK,WYL,DEDDh,RT	0	0	6	0

Results visualization

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CRISPR-Cas detection and classification

Crispr_ID: NZ_AP014522_1

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014522_1

1676794-1676998

Orphan

Consensus_repeat	Method
GGTGGCCTGGTGGGCTACAACCAGAACAGCG	PILER-CR

2 spacers

The CRISPR arrays of NZ_AP014522_1

>merge|NZ_AP014522|1|1676794-1676998|PILER-CR
GGTGGCCTGGTGGGTTACAACCAGGGTGGCAGGATCGAACGCGCCAGCTCCTCGGTCGGCGTCTGGGGGTACACCGCCAGCCGTATCGGCGGCCTGGTGGGCTTCAACAACAACGGCGCTATCGTCGACTCCAGCGCCAGTGGCGCGGTGGTCGGTGCGGGCTCCGTGGCTGCCGGTGGCCTGGTGGGCTGGAACCAGAACAGCG

>NZ_AP014522|1|1|1676794-1676998|PILER-CR
GGTGGCCTGGTGGGTTACAACCAGGGTGGCA	GGATCGAACGCGCCAGCTCCTCGGTCGGCGTCTGGGGGTACACCGCCAGCCGTATCGGCGGCC
TGGTGGGCTTCAACAACAACGGCGCTATCGT	CGACTCCAGCGCCAGTGGCGCGGTGGTCGGTGCGGGCTCCGTGGCTGCCGGTGGCC
TGGTGGGCTGGAACCAGAACAGCG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014522.1\|WP_015634532.1\|1683328_1683778_-\|PaaI-family-thioesterase	unknown	unknown	gnl\|CDD\|239527
NZ_AP014522.1\|WP_041116488.1\|1663735_1664614_+\|4-hydroxy-tetrahydrodipicolinate-synthase	unknown	unknown	gnl\|CDD\|235107
NZ_AP014522.1\|WP_041116513.1\|1689665_1690853_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|132248
NZ_AP014522.1\|WP_011059799.1\|1666538_1667252_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	unknown	unknown	gnl\|CDD\|181800
NZ_AP014522.1\|WP_041116502.1\|1679196_1682184_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	unknown	unknown	gnl\|CDD\|273865
NZ_AP014522.1\|WP_041116496.1\|1672827_1674579_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	unknown	unknown	gnl\|CDD\|225387
NZ_AP014522.1\|WP_011059795.1\|1662848_1663409_-\|glycine-cleavage-system-protein-R	unknown	unknown	gnl\|CDD\|225337
NZ_AP014522.1\|WP_041116508.1\|1687239_1688208_+\|nitronate-monooxygenase	unknown	unknown	gnl\|CDD\|224981
NZ_AP014522.1\|WP_041116506.1\|1685852_1687208_+\|MFS-transporter	unknown	unknown	gnl\|CDD\|340877
NZ_AP014522.1\|WP_041116511.1\|1688521_1689655_-\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|132247
NZ_AP014522.1\|WP_011059797.1\|1664631_1665747_+\|outer-membrane-protein-assembly-factor-BamC	unknown	unknown	gnl\|CDD\|225854
NZ_AP014522.1\|WP_041116489.1\|1665751_1666510_+\|MBL-fold-metallo-hydrolase	unknown	unknown	gnl\|CDD\|293819
NZ_AP014522.1\|WP_015634531.1\|1682381_1683170_-\|IclR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|224332
NZ_AP014522.1\|WP_041116490.1\|1668593_1669337_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|236634
NZ_AP014522.1\|WP_041116504.1\|1684100_1685804_+\|long-chain-fatty-acid--CoA-ligase	unknown	unknown	gnl\|CDD\|236235
NZ_AP014522.1\|WP_041116494.1\|1672094_1672853_+\|fimbria/pilus-periplasmic-chaperone	unknown	unknown	gnl\|CDD\|236634
NZ_AP014522.1\|WP_041116509.1\|1688264_1688516_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_015634520.1\|1667999_1668566_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_AP014522.1\|WP_052470393.1\|1669512_1672095_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_AP014522.1\|WP_041116500.1\|1678030_1679053_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069

Protein	Function_ID	Function_description	E-value
NZ_AP014522.1\|WP_015634532.1\|1683328_1683778_-\|PaaI-family-thioesterase	gnl\|CDD\|239527	cd03443, PaaI_thioesterase, PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).	1.02767e-24
NZ_AP014522.1\|WP_041116488.1\|1663735_1664614_+\|4-hydroxy-tetrahydrodipicolinate-synthase	gnl\|CDD\|235107	PRK03170, PRK03170, dihydrodipicolinate synthase; Provisional.	0
NZ_AP014522.1\|WP_041116513.1\|1689665_1690853_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|132248	TIGR03204, pimC_large, pimeloyl-CoA dehydrogenase, large subunit. Members of this protein family are the PimC proteins of species such as Rhodopseudomonas palustris and Bradyrhizobium japonicum. The pimFABCDE operon encodes proteins for the metabolism of straight chain dicarboxylates of seven to fourteen carbons. Especially relevant is pimeloyl-CoA, basis of the gene symbol, as it is a catabolite of benzoyl-CoA degradation, which occurs in Rhodopseudomonas palustris.	2.93435e-153
NZ_AP014522.1\|WP_011059799.1\|1666538_1667252_+\|phosphoribosylaminoimidazolesuccinocarboxamide-synthase	gnl\|CDD\|181800	PRK09362, PRK09362, phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed.	5.27066e-146
NZ_AP014522.1\|WP_041116502.1\|1679196_1682184_+\|filamentous-hemagglutinin-N-terminal-domain-containing-protein	gnl\|CDD\|273865	TIGR01901, Heme/hemopexin-binding_protein, filamentous hemagglutinin family N-terminal domain. This model represents a conserved domain found near the N-terminus of a number of large, repetitive bacterial proteins, including many proteins of over 2500 amino acids. Members generally have a signal sequence, then an intervening region, then the region described by this model. Following this region, proteins typically have regions rich in repeats but may show no homology between the repeats of one member and the repeats of another. A number of the members of this family have been designated adhesins, filamentous haemagglutinins, heme/hemopexin-binding protein, etc.	1.99342e-22
NZ_AP014522.1\|WP_041116496.1\|1672827_1674579_+\|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein	gnl\|CDD\|225387	COG2831, FhaC, Hemolysin activation/secretion protein [Intracellular trafficking and secretion].	1.34635e-118
NZ_AP014522.1\|WP_011059795.1\|1662848_1663409_-\|glycine-cleavage-system-protein-R	gnl\|CDD\|225337	COG2716, GcvR, Glycine cleavage system regulatory protein [Amino acid transport and metabolism].	1.36922e-64
NZ_AP014522.1\|WP_041116508.1\|1687239_1688208_+\|nitronate-monooxygenase	gnl\|CDD\|224981	COG2070, COG2070, Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only].	6.47065e-94
NZ_AP014522.1\|WP_041116506.1\|1685852_1687208_+\|MFS-transporter	gnl\|CDD\|340877	cd17319, MFS_ExuT_GudP_like, Hexuronate transporter, Glucarate transporter, and similar transporters of the Major Facilitator Superfamily. This family is composed of predominantly bacterial transporters for hexuronate (ExuT), glucarate (GudP), galactarate (GarP), and galactonate (DgoT). They mediate the uptake of these compounds into the cell. They belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.	4.33957e-92
NZ_AP014522.1\|WP_041116511.1\|1688521_1689655_-\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|132247	TIGR03203, pimD_small, pimeloyl-CoA dehydrogenase, small subunit. Members of this protein family are the PimD proteins of species such as Rhodopseudomonas palustris, Bradyrhizobium japonicum. The pimFABCDE operon encodes proteins for the metabolism of straight chain dicarboxylates of seven to fourteen carbons. Especially relevant is pimeloyl-CoA, basis of the gene symbol, as it is a catabolite of benzoyl-CoA degradation, which occurs in Rhodopseudomonas palustris.	2.85227e-101
NZ_AP014522.1\|WP_011059797.1\|1664631_1665747_+\|outer-membrane-protein-assembly-factor-BamC	gnl\|CDD\|225854	COG3317, NlpB, Uncharacterized lipoprotein [Cell envelope biogenesis, outer membrane].	4.03424e-72
NZ_AP014522.1\|WP_041116489.1\|1665751_1666510_+\|MBL-fold-metallo-hydrolase	gnl\|CDD\|293819	cd07733, YycJ-like_MBL-fold, uncharacterized subgroup which includes Bacillus subtilis YycJ and related proteins; MBL-fold metallo hydrolase domain. Includes the uncharacterized Bacillus subtilis YycJ protein. Members of this subgroup belong to the MBL-fold metallo-hydrolase superfamily which is comprised mainly of hydrolytic enzymes which carry out a variety of biological functions. The class B metal beta-lactamases (MBLs) from which this fold was named are only a small fraction of the activities which are included in this superfamily. Activities carried out by superfamily members include class B beta-lactamases, hydroxyacylglutathione hydrolases, AHL (acyl homoserine lactone) lactonases, persulfide dioxygenases, flavodiiron proteins, cleavage and polyadenylation specificity factors such as the Int9 and Int11 subunits of Integrator, Sdsa1-like and AtsA-like arylsulfatases, 5'-exonucleases human SNM1A and yeast Pso2p, ribonuclease J and ribonuclease Z, cyclic nucleotide phosphodiesterases, insecticide hydrolases, and proteins required for natural transformation competence. Classical members of the superfamily are di-, or less commonly mono-, zinc-ion-dependent hydrolases, however the diversity of biological roles is reflected in variations in the active site metallo-chemistry.	3.18581e-59
NZ_AP014522.1\|WP_015634531.1\|1682381_1683170_-\|IclR-family-transcriptional-regulator	gnl\|CDD\|224332	COG1414, IclR, Transcriptional regulator [Transcription].	3.59043e-51
NZ_AP014522.1\|WP_041116490.1\|1668593_1669337_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	4.43385e-75
NZ_AP014522.1\|WP_041116504.1\|1684100_1685804_+\|long-chain-fatty-acid--CoA-ligase	gnl\|CDD\|236235	PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated.	0
NZ_AP014522.1\|WP_041116494.1\|1672094_1672853_+\|fimbria/pilus-periplasmic-chaperone	gnl\|CDD\|236634	PRK09926, PRK09926, fimbrial chaperone.	4.12488e-70
NZ_AP014522.1\|WP_015634520.1\|1667999_1668566_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	6.70545e-22
NZ_AP014522.1\|WP_052470393.1\|1669512_1672095_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_AP014522.1\|WP_041116500.1\|1678030_1679053_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	1.22118e-09

>NZ_AP014522.1|WP_041116496.1|1672827_1674579_+|ShlB/FhaC/HecB-family-hemolysin-secretion/activation-protein
MEVRGYKTEVALGKSSNSPLAGRLERRWQRLSGGCLGLLLMLPAVAAAAVYVPNAGQAMRDIQATQPALPEQPAPELDLPAKPPSAPAQAPDTSGIRLQVNDFVIVGNQVFSNETLQALLADLKGQELDLNQLRAAAERLTTYYQNQGYMLARAFLPAQDIEDGVVCIEVMEGRYGRIQVNNQSRALNSVITGPLSSLHSDTAVRSEDLERSLLLLSDLPGVRVKGTLSAGEQRGTTDLLVNAQPGPWASGTLEADNFGGYYTGEYRLGGSLNLNNPLRLGDQFNLRLLGSDEDQRYYRAAYKLPLGPWSTSVGVAYSRMNYELSRDFEVLEAHGQASIGSVFITQPLIRSRTFDLSAQLQYEDKRLRDDIDLFEVSSQKHVELWSLSLNGNSQDSLFGGGQNFFYLTYGSGRLSIDDPMDQWRDHFTAGTNGGFQKLNLNAARLQYLSPRFQLYGQFNGQWSSTNLDSSEKFGIGGPFDVRAYPQGTSSGDQGWQASLELRFLLAPRWQLKAFVDHGAVQVNKSPWIHDENRRQLSGAGVGASWSGPSQQISVTSAWALDNNQEGSGPERTPRIWASATQYF
>NZ_AP014522.1|WP_041116494.1|1672094_1672853_+|fimbria/pilus-periplasmic-chaperone
MGHQGEYGRLCSLRGCRWLLGLLALSSGWAQADLSIVGTRFIYPAGKPAISIRVGNSGRAPILLQAWLDKGDAEVDPSVLVVPFVLSPPISRLEPRQNAALVLRYSGEPLPGDRESVFWINFLEVPPLAAAKDDLLRLASRMRMKLLYRPQGLSGKADEAVGQLRWRLVAPGQAGAALLAGNPTPYYVSFAEVALGSGNRSITLQGITVEPFGSARIPLPDMQGITPDQAVVHYQVATDSGETLSGSARIQD
>NZ_AP014522.1|WP_052470393.1|1669512_1672095_+|fimbrial-biogenesis-outer-membrane-usher-protein
MSNSMVLVADQDGIAPATAEAADTGSSQDVLFDSQMLFQGKGTPIDTSRFQQVGYVAPGTYLLDVLVSSQWRALQEIQFRASDDPQGSQPCYDRSLLQQLGIDLKKTDASLGTHSSHPLMGDGLFCGDLGSYIPGATTRVKIAEQKIELSVPQLFLQQNLSKTYVDPASWDYGVSAATLNYNTSLFSSQSNGRSQTDGYAGLNLGVNLGDWRLRHSGTATWSPEVGGHYQRGYIYAQTDLPAWHSQLLVGESATEADLFDSVSFRGVRLASDPRMLPESQRYYAPQIRGTASTNAKVSVYQRGYMIYETSVAPGPFEISDLQAASFGGDLDVTVTEANGQTSRFTVPFATTVQTLRPGTSRYSLTAGKVANPGLGGSEQYVAQGTLHYGLDNQLTGYAGTALTGSYMSALIGSALNTSLGAFGLDLTQARTELPRGGSMQGQSVRLSYSKNLPNSGTNFSLLAYRYSTSGYLGLHDAITLQDHVNQGESVDSFARVRDRLDININQQLGDGAGQLYATGSSLQYWNRQGQTLNFAMGYSNQWRGNSYSFMAQRMRASSSGSRAGAGADNTFFSFSLSIPLGREGRRGTTINSYASHDKRSGAHYTSGISGVLDKDGDATYALSAAHDQRQGETSTNASLNYFLPEVSLSSSFSQGRDYRQQSLGASGGMVLHSGGLTFAQTLSETTGLVHAPDAKGARVGYADTRVDGSGYAVVSSLSPYQLNTVDIDPTGVADDVELLLSSRHVAPVAGAVVMLSYPTRRARAVLIDSQQPDGQQLPFAAVAVDAQDGAELGAVGQGSRLVLRTEQDQGTIRVEWGQEPDQQCLIDYQLPPRDTASATGYVVLQRPCRAMPAGSVEERP
>NZ_AP014522.1|WP_041116490.1|1668593_1669337_+|fimbria/pilus-periplasmic-chaperone
MTPTARFVHSLVIGVMFLGMLSGAAHAGIVLEGTRLVYPADAREVTLKLSNTGSVALLAQSWIDEGDANKSPEEIKVPFLLAPAVSRVEAGGSAILRVSYSKEPLAKDRESLFWLNVLETPPRRKQDENVLQFAFRTRIKIFFRPDNLIGNAGMAGEKLKWELSRAGASQVPVIKVYNPTPYYVSFGRMEVAVSGRRIDLKPGMVAPFGYESFSWPAGAPSQPAKASIEYEVIDDFGGRGLLKKSLL
>NZ_AP014522.1|WP_015634520.1|1667999_1668566_+|type-1-fimbrial-protein
MKRKTLLSMATSGLMLAALIPSFAQATDGVVKFSGSISDTTCDINGKAPGEGNETNVELGTIKPTVFDKIGARSPLVPFVLQLSGANCTAGKKVSIEFDQLGNVDPASGNLKLIGSKPATGVQIEVYNDHDTTPQKIVLGQAEASPQIATISTDKAATLKYKAAYVSTEATVGAGSGVSYIRYTLAYQ
>NZ_AP014522.1|WP_011059799.1|1666538_1667252_+|phosphoribosylaminoimidazolesuccinocarboxamide-synthase
MEKREELYRGKAKSVYKTDDADRLILLFRNDTSAFDGKRIEQLDRKGMVNNKFNAFIMQKLEAAGVPTQFDKLLGDNECLVKKLDMIPVECVVRNYAAGSLVKRLGVEEGMKLNPYTFELFLKDDAKGDPFINESHVVAFGWGTAEQLARMKELSLKVNEVLSKLFDDAGLLLVDFKLEFGVFSDGSIVLGDEFSPDGCRLWDKDTKKKMDKDRFRQGLGDVIEAYEEVAQRLGVPL
>NZ_AP014522.1|WP_041116489.1|1665751_1666510_+|MBL-fold-metallo-hydrolase
MRFAVLGSGSQGNGTLIVSADTCVLVDCGFSLRETERRLLRLGVDPAQLSAILVTHEHADHVHGVGLLSRRYNLPVYLSQGTLRGMRKPVEVAGFVRGGESLQIGALRIDVIAVAHDAQEPTQFVFSDGQRRFGLLTDLGSYCAGVLDGYRGLDALMIEANHCRDRLARGYYPYFLKQRVGGDLGHLNNHQAASLVAELGWQDLQHLVLAHLSSKNNLPQLSRQCFVDTLGCDPDWLQLADQDSGLDWRHIA
>NZ_AP014522.1|WP_011059797.1|1664631_1665747_+|outer-membrane-protein-assembly-factor-BamC
MKRMAGLSALALIISSTSGCGWIWGPEGYFRDRGSDYLQAQQTAPMQLPPDVQTAKRLDPLLPIPRNVADDNVKGEYEVPRPQPLSAIADASDYTLQKSGDSRWVMAQHPPAEVWPVAVQFFQDNGFRLDQQRPQTGEFTTGWQRSDELSAAVAKRLSSAGVAADSETRVRVRIEPGVQRNTSEVYVVSAERPAGSTADVEFTNRSVNTGLDAALVDDMLASMSRTSEKGGSVSLLAARDFDTPSRVSLSEDGSGNPVLNLGADLDRAWSSVGRALEQGEWRVEDINRSLGLYYINLAEKAEKKDDEPGFFGKLFGSKPAKEEIEARAERYQVRLSKVGENVQVTVEKNINTVAPADVARKVLGVIQDNLG
>NZ_AP014522.1|WP_041116488.1|1663735_1664614_+|4-hydroxy-tetrahydrodipicolinate-synthase
MIAGSMVALVTPMDAQGNLDWDSLSKLVDFHLQEGTNAIVAVGTTGESATLDVNEHIEVIRRVVTQVAGRIPVIAGTGANSTREAIELTTNAKIAGADACLLVTPYYNKPTQEGLYQHFRAIAEAVDIPQILYNVPGRTACDMQAETVIRLSSVKNIIGIKEATGDLQRAKVILAGVPGDFLVYSGDDATAVELILLGGKGNISVTANVAPRAMSQMCAAAMAGDAAKAREIHETLMPLNKTLFIESNPIPVKWALHEMGLMPDGIRLPLTWLSAACHEPLRQAMRQSGVLV
>NZ_AP014522.1|WP_011059795.1|1662848_1663409_-|glycine-cleavage-system-protein-R
MSTPTVREQFLVISALGANPMELTNVLCRASHENRCAVVTSRLTRHGECSALVLEISGSWDALARLESSLPFLAKKHAFTVNVVRSAALESRPQALPYVAYVSAAYRSDIVNELCQFFIDHQVELENLTCDTYQAPQTGGTMLNATFTVTLPAGTQISWLRDQFLDFADAMNLDALIEPWRPQNPM
>NZ_AP014522.1|WP_041116500.1|1678030_1679053_+|type-1-fimbrial-protein
MNGYARDCNLSSKAGSPWRLVNPLNTNTPVGTVLWERTVTLHTSFNLAISGKPRELVTAGHWSPGTPQTDDAAPTDVAGIGLRLDAAPQGRERIRVTQVTSPIALEKNDDLIYENGLPAQTMVTQIIQSLILTVPPDQLPTGTLKVTQVTGSSYLQLYAYDLEKNESTLGSQLGKLSPPLTYSCRKSLVMGGLDFNMDIELPKTCVVEAYKEIAVRLGRFSLADFPQVNATSPEVPFSIGLSRCSMQARPRISFIDKSGGSAVKGVLGLIDSTTRGFGIVMTNGLTSERIEYSGQSYEMQRIGDGASIPLRASYIRIGNDQEVHAGGPANGAAEFTFTFP
>NZ_AP014522.1|WP_041116502.1|1679196_1682184_+|filamentous-hemagglutinin-N-terminal-domain-containing-protein
MNKIYALVWNQAQGCWNVTHEGARRRRAGSGKGLVVAVASLLALTGLPSAFALPTGGEVVSGSADFHTQGQHMSINQQTDKLVTQWKDFNVQNGQSVTFNQPTSTSIALNRVVGVNGSQIHGQINANGRVFLINPNGVVFGQGAQVNVGGLVASTRDISDADFKAGNYKFAGTSAAEVVNLGSITAADGGGVALLGARVTIQGTIKAQNGRVALAAGDGFTVSFDDNQLLDLHVDSAALDALVHNTGTGLLKADGGQVLMTAKSAGSMLQTVVNNQGTVEANTLSQRAGRITLDGGDVGVVSVDGSLRASALDGKGDGGVIETRGANTRVQLTTKVDTQARDGQTGTWKIASNEVKVGSFLTAKSNTAHADTLSRNLATTHIELASGKGDVAVENGLFWFSGNQLTLSSAKDIRLDDSLFAGGANARVELNAQGDIKLNRQLTLSGSNSSLGLNHGGNFALGQNGGVTLSGNGARFDANGEAYSVIQNATQLQAIDQDLAGRYVLGNSIDSSARLTSIGGQQTFSGVFEGLGNTLSGLTVNSNGTDGGLFASSSGSIGNLKLASMTINGATSTTGSSAVGGLVGRNSGKIANVSASKLRVNAKGRQDNLVGGLVGSNAGGSIDASSVAGVVLGNSFTSAAGGLVGENRQVAGSGGTVTNSSADVRLTASIASNAEGGVGGLVGVNHQGLIAASSSSGTVSSGDSYSYKGTNLGGLVGYNQGGRIEGSQSSTAVSGNGASHAGGLVGRNESGRISDSVASGGLLGKNFATAGGLVGLNQDSTLHNVTASGSVNGGSSLHIGGLVGQNIDGHISLAEAFGLVQGASNSNVGGLVGYNVGGLVANSTAWGNVVGKDQSHVGGLIGYNAGDLKSVEARGDASAGDKSAVGGLVGTHGVLKGDSLIDTASAKGNVSGGSYSVVGGLVGQNNARIVNALASGEVSGSRDAQLGGLAGVDLGDILQSAAFGNIQVIAPNYASLGYDRPFSQAADFNQGVMGN
>NZ_AP014522.1|WP_015634531.1|1682381_1683170_-|IclR-family-transcriptional-regulator
MQDPNDSPEQAPKDRKFVEALARGLEVLRAFTHGHAVRGNQDIARITGLPKPTVSRLTYTLTQLGYLKYNQDLEKYQLDSAVLALGYAYSASLRVRQLGKPFMDEFSRRTNTTVSLTCRDRLSMIHVDSSRPPEVASLRMEPGLRLPLATSAAGRAYLAATPKIERDHLLGEVAKKLGDEWPALEKSLEDSFREYEEFGFCLSLGEWDRNVNGAGVPLRLADGSIMALTCGAPSFQLSSEKLESSLAHQLVMLARDLESLGV
>NZ_AP014522.1|WP_015634532.1|1683328_1683778_-|PaaI-family-thioesterase
MSAVPEVSMLQGLFSGFAAHLGLNLREYQQAQTVIAVTVQPHHLNQAGNLHGGVIASLADTAMGMSGTWHADPAQWRLALTLSLNINYMAAIPPATEVRAVARLRGGGAKIFMASCDLLDAQDRLLASAEGVFKRGRLRAAATEVVACP
>NZ_AP014522.1|WP_041116504.1|1684100_1685804_+|long-chain-fatty-acid--CoA-ligase
MSTARTQRPHHRVWPKRLPLALSVPATSLWFNLEVAARRYPDKVAYRFFGHTLSFAQLQAEALALAGWLQGEGVEPGDRVALYLQNCPQFIVACYAILRANAVLVPINPMNKVQELSYQLGDAQARVLICAADLAPIAQAANASLEPEQRLHRVLVTRYSDAMPAPADMHPAEVASAEIDAWLRSEPALPEGYQRWNEALAQACCPGPHTAQADDLALLQYTSGTTGHPKGCMHTHRSLMSNAVSGSWTQSTVESVGLGVVPFFHITGLVCFVLRAVFDATSTVIMPRWDRELAGRLISRYRVTHWTCIPTMVIDLFASPHYQDFELSSLVHINGGGAAMPEAVAQRLRQEFGLTFLEGYGLTETAAASHGNPPERAKLQCLGMPFFGVDSRVVDPRTLEELAPGEVGEIITSGPMLFKGYWRNPEATEAAFVEFEGKRFLRTGDLGHMDEEGYFFLTDRLKRMINSSGFKVWPAEVEALLFKHPAVHEACVIATRDAYRGESVKALVVLRSEARGRTASEEIIAWAREHMAAYKVPRVLEFVDSLPKSGSGKVMWRVLQDREATHS
>NZ_AP014522.1|WP_041116506.1|1685852_1687208_+|MFS-transporter
MTTTTITVQDPHASPEHARQLDTLYATIRWRLLPLLMLCYMVAFLDRVNIGYAQLQMKQTLPFGDAVYGLGAGIFFIGYFIFEVPSNLMLKRSGVRKTLLRIMFCWGLVAAAMMFVSTPMQFYVLRFLLGAFEAGFFPGVILYFTYWFPAPRRGQVIAIFMTAAAVAGLIAGPVSGSILKYLDGAVGLHGWQWMFMIQGLPASVLGVVAFFYLQDSPARARWLSPGEKRLLDADMAQDLANARDKSQDSLAQMFRDPRIYLLSTAYFMFLGATYMLVFWMPSLIQGWGSKDLLQVGLITAIPNIVGIVGMVLIGQHSDKHRERRWHFVGCMAIAVFGLAVTTLLNGHLLLSVTALGFAYVGIKAGTPIFFALVSEYLSVAATAGGIAFISSLGNLGPAVTPWLNGVINSHTGGHVSSMYLGIVMYLLAGGLVLVTARIARVPKVAAVVAES
>NZ_AP014522.1|WP_041116508.1|1687239_1688208_+|nitronate-monooxygenase
MSLPKILTQHLRLPVVAAPLFIISTPELVIAQCKAGIVGSFPALNARPAERLGEWIEQITQALAEHDRLHPQRPAAPFAVNQIVHRSNDRLEQDMAVCVQHKVPIIITSLGARPEINQAVHSYGGIVLHDVINNRFARKAIDKGADGLIAVAAGAGGHAGTQSPFALVQEIRQWFDGPLLLSGAIASGRSILAAQALGADLAYIGSAFIATQEANAVAGYKQMISQSTAEDIVYTNLITGVHGNYLKASLVAAGLDPDDLPSSDPSQMNFGADRHKPKAWKEIWGCGQGIGVVDGVPSAADLVARLGREYQQACQELRTRLL
>NZ_AP014522.1|WP_041116509.1|1688264_1688516_-|hypothetical-protein
MNLGPGGHLSLSQGQQVSPPSLPGAQRAARRCAQSPLLNPSQAWRRISAAPGKGVAEVDNRHLEVMESLAYRGHALSLIHKIW
>NZ_AP014522.1|WP_041116511.1|1688521_1689655_-|acyl-CoA-dehydrogenase-family-protein
MNFEHSAERRMLGESLNRFIAQHYNLEKRQQSLQSGQGFNSGIWQQLAEMGVIGALFSEADGGYGGGGFDLALVFEAVGRGLLVEPLLGSAVLAGDAIASAGSETQKIELAQIIDGSLIAALAHDEPDSHYELNRVACRAEPQADGWCLDGTKSLVLHGEQAGLLVVSARTAGAIDDSQGISLFLVPRDTPGLEIRGSATLDGGPVAQVRLNQLLVPGSALLGSLHQGHATLERAIGRGVLALCAEALGAMEVAKVATLDYLRTRQQFGRPIGSFQALQHRMAVLLLEIEQARSAVINAASALEADRLDRERALSAAKVSIGRIGTLVAQECIQLHGGIGMTWELPLAHYAKRLVMIDHQLGDEDHHLQRYIALGKQ
>NZ_AP014522.1|WP_041116513.1|1689665_1690853_-|acyl-CoA-dehydrogenase-family-protein
MDLSFTPQEEAFRNQVQAFLAEHLPSELSDKVANGERLSKADMEHWHSTLNTRGWLANHWPEAFGGPGWSAVEKFIFELECGLANAPRIVPFGVNMLGPVLIKYGTPQQQDYWLPRILDGRHWWCQGYSEPGAGSDLAAVKTTAVRDGDHYVVNGQKTWTTLGQHANMIFCLVRTDREAKPQEGISFLLIDMASPGVEVRPIITLEGDHEINEVFFTDVRVPVANLVGEENKGWTCAKYLLTYERTNIAGVGLSMAALQRLKRVAAQRTRNGRPLLEDPQFAARLARVEIDLENMKTTNLRVIAAVAGGGAPGAESSMLKICGTEIRQELTALLRRAMGPAARVMQDEGDTGAMDLGPAFASSAAAQYFNNRKLSIFGGSNEIQKNIISKMILGL

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Crispr_ID: NZ_AP014522_2

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014522_2

4445389-4445530

Orphan

Consensus_repeat	Method
GAGCCGGCTTGCCGGCGAAGGGGCCAGCAAGCCTTGCATGGCCCT	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014522_2

>merge|NZ_AP014522|2|4445389-4445530|CRISPRCasFinder
GAGCCGGCTTGCCGGCGAAGGGGCCAGCAAGCCTTGCATGGCCCTGTCGGACGCCTTCCCTGGCAAGCCCGCTCCTACAACAAATGCCCTACCGTAAGAGCCGGCTTGCCGGCGAAGGGGCCAACAAGCCTTGCATGGCCCT

>NZ_AP014522|2|1|4445389-4445530|CRISPRCasFinder
GAGCCGGCTTGCCGGCGAAGGGGCCAGCAAGCCTTGCATGGCCCT	GTCGGACGCCTTCCCTGGCAAGCCCGCTCCTACAACAAATGCCCTACCGTAA
GAGCCGGCTTGCCGGCGAAGGGGCCAACAAGCCTTGCATGGCCCT

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014522.1\|WP_041119063.1\|4442142_4443843_-\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	unknown	unknown	gnl\|CDD\|235424
NZ_AP014522.1\|WP_011062206.1\|4449843_4450326_-\|MarR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|183170
NZ_AP014522.1\|WP_041119076.1\|4458669_4462347_-\|translocation/assembly-module-TamB	unknown	unknown	gnl\|CDD\|225463
NZ_AP014522.1\|WP_011062205.1\|4448384_4449854_-\|efflux-transporter-outer-membrane-subunit	unknown	unknown	gnl\|CDD\|273830
NZ_AP014522.1\|WP_011062193.1\|4434564_4434888_+\|NADH-quinone-oxidoreductase-subunit-NuoK	unknown	unknown	gnl\|CDD\|180218
NZ_AP014522.1\|WP_015636299.1\|4438317_4439781_+\|NADH-quinone-oxidoreductase-subunit-NuoN	unknown	unknown	gnl\|CDD\|235603
NZ_AP014522.1\|WP_041119057.1\|4434884_4436738_+\|NADH-quinone-oxidoreductase-subunit-L	unknown	unknown	gnl\|CDD\|235836
NZ_AP014522.1\|WP_011062204.1\|4447167_4448370_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	unknown	unknown	gnl\|CDD\|185090
NZ_AP014522.1\|WP_011062201.1\|4444113_4444617_+\|peptidyl-prolyl-cis-trans-isomerase	unknown	unknown	gnl\|CDD\|238901
NZ_AP014522.1\|WP_011062203.1\|4445560_4447090_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	unknown	unknown	gnl\|CDD\|129794
NZ_AP014522.1\|WP_019092840.1\|4436777_4438310_+\|NADH-quinone-oxidoreductase-subunit-M	unknown	unknown	gnl\|CDD\|235622
NZ_AP014522.1\|WP_041119070.1\|4454653_4455268_+\|type-1-fimbrial-protein	unknown	unknown	gnl\|CDD\|226069
NZ_AP014522.1\|WP_041119068.1\|4454136_4454373_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|182771
NZ_AP014522.1\|WP_041119073.1\|4456175_4458665_+\|fimbrial-biogenesis-outer-membrane-usher-protein	unknown	unknown	gnl\|CDD\|225729
NZ_AP014522.1\|WP_011062202.1\|4444613_4445366_+\|UDP-2,3-diacylglucosamine-diphosphatase	unknown	unknown	gnl\|CDD\|235420
NZ_AP014522.1\|WP_041119058.1\|4440018_4440369_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_041119066.1\|4450941_4454115_+\|hybrid-sensor-histidine-kinase/response-regulator	unknown	unknown	gnl\|CDD\|182772
NZ_AP014522.1\|WP_041119072.1\|4455340_4456090_+\|molecular-chaperone	unknown	unknown	gnl\|CDD\|225663
NZ_AP014522.1\|WP_041119061.1\|4440741_4442124_-\|cysteine--tRNA-ligase	unknown	unknown	gnl\|CDD\|234705
NZ_AP014522.1\|WP_041119060.1\|4440355_4440673_+\|transcriptional-regulator	unknown	unknown	gnl\|CDD\|225495

Protein	Function_ID	Function_description	E-value
NZ_AP014522.1\|WP_041119063.1\|4442142_4443843_-\|glutamine--tRNA-ligase/YqeY-domain-fusion-protein	gnl\|CDD\|235424	PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional.	0
NZ_AP014522.1\|WP_011062206.1\|4449843_4450326_-\|MarR-family-transcriptional-regulator	gnl\|CDD\|183170	PRK11512, PRK11512, multiple antibiotic resistance transcriptional regulator MarR.	1.27524e-26
NZ_AP014522.1\|WP_041119076.1\|4458669_4462347_-\|translocation/assembly-module-TamB	gnl\|CDD\|225463	COG2911, COG2911, Uncharacterized protein conserved in bacteria [Function unknown].	0
NZ_AP014522.1\|WP_011062205.1\|4448384_4449854_-\|efflux-transporter-outer-membrane-subunit	gnl\|CDD\|273830	TIGR01845, Outer_membrane_protein_OprM, efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family. Members of this model comprise a subfamily of the Outer Membrane Factor (TCDB 1.B.17) porins. OMF proteins operate in conjunction with a primary transporter of the RND, MFS, ABC, or PET systems, and a MFP (membrane fusion protein) to tranport substrates across membranes. The complex thus formed allows transport (export) of various solutes (heavy metal cations; drugs, oligosaccharides, proteins, etc.) across the two envelopes of the Gram-negative bacterial cell envelope in a single energy-coupled step. Current data suggest that the OMF (and not the MFP) is largely responsible for the formation of both the trans-outer membrane and trans-periplasmic channels. The roles played by the MFP have yet to be determined. [Cellular processes, Detoxification, Transport and binding proteins, Porins].	6.25104e-117
NZ_AP014522.1\|WP_011062193.1\|4434564_4434888_+\|NADH-quinone-oxidoreductase-subunit-NuoK	gnl\|CDD\|180218	PRK05715, PRK05715, NADH-quinone oxidoreductase subunit NuoK.	3.97963e-40
NZ_AP014522.1\|WP_015636299.1\|4438317_4439781_+\|NADH-quinone-oxidoreductase-subunit-NuoN	gnl\|CDD\|235603	PRK05777, PRK05777, NADH-quinone oxidoreductase subunit NuoN.	4.41512e-161
NZ_AP014522.1\|WP_041119057.1\|4434884_4436738_+\|NADH-quinone-oxidoreductase-subunit-L	gnl\|CDD\|235836	PRK06590, PRK06590, NADH:ubiquinone oxidoreductase subunit L; Reviewed.	0
NZ_AP014522.1\|WP_011062204.1\|4447167_4448370_-\|efflux-RND-transporter-periplasmic-adaptor-subunit	gnl\|CDD\|185090	PRK15136, PRK15136, multidrug efflux MFS transporter periplasmic adaptor subunit EmrA.	1.3498e-136
NZ_AP014522.1\|WP_011062201.1\|4444113_4444617_+\|peptidyl-prolyl-cis-trans-isomerase	gnl\|CDD\|238901	cd01920, cyclophilin_EcCYP_like, cyclophilin_EcCYP_like: cyclophilin-type A-like peptidylprolyl cis- trans isomerase (PPIase) domain similar to the cytosolic E. coli cyclophilin A and Streptomyces antibioticus SanCyp18. Compared to the archetypal cyclophilin Human cyclophilin A, these have reduced affinity for cyclosporin A. E. coli cyclophilin A has a similar peptidylprolyl cis- trans isomerase activity to the human cyclophilin A. Most members of this subfamily contain a phenylalanine residue at the position equivalent to Human cyclophilin W121, where a tyrptophan has been shown to be important for cyclophilin binding.	3.40058e-75
NZ_AP014522.1\|WP_011062203.1\|4445560_4447090_-\|DHA2-family-efflux-MFS-transporter-permease-subunit	gnl\|CDD\|129794	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli. [Cellular processes, Toxin production and resistance, Transport and binding proteins, Other].	2.54807e-148
NZ_AP014522.1\|WP_019092840.1\|4436777_4438310_+\|NADH-quinone-oxidoreductase-subunit-M	gnl\|CDD\|235622	PRK05846, PRK05846, NADH:ubiquinone oxidoreductase subunit M; Reviewed.	0
NZ_AP014522.1\|WP_041119070.1\|4454653_4455268_+\|type-1-fimbrial-protein	gnl\|CDD\|226069	COG3539, FimA, P pilus assembly protein, pilin FimA [Cell motility and secretion / Intracellular trafficking and secretion].	4.91843e-11
NZ_AP014522.1\|WP_041119073.1\|4456175_4458665_+\|fimbrial-biogenesis-outer-membrane-usher-protein	gnl\|CDD\|225729	COG3188, FimD, P pilus assembly protein, porin PapC [Cell motility and secretion / Intracellular trafficking and secretion].	0
NZ_AP014522.1\|WP_011062202.1\|4444613_4445366_+\|UDP-2,3-diacylglucosamine-diphosphatase	gnl\|CDD\|235420	PRK05340, PRK05340, UDP-2,3-diacylglucosamine hydrolase; Provisional.	4.73688e-150
NZ_AP014522.1\|WP_041119068.1\|4454136_4454373_+\|hypothetical-protein	gnl\|CDD\|182771	PRK10840, PRK10840, transcriptional regulator RcsB; Provisional.	0.000237856
NZ_AP014522.1\|WP_041119066.1\|4450941_4454115_+\|hybrid-sensor-histidine-kinase/response-regulator	gnl\|CDD\|182772	PRK10841, PRK10841, two-component system sensor histidine kinase RcsC.	3.27064e-116
NZ_AP014522.1\|WP_041119072.1\|4455340_4456090_+\|molecular-chaperone	gnl\|CDD\|225663	COG3121, FimC, P pilus assembly protein, chaperone PapD [Cell motility and secretion / Intracellular trafficking and secretion].	2.21528e-66
NZ_AP014522.1\|WP_041119061.1\|4440741_4442124_-\|cysteine--tRNA-ligase	gnl\|CDD\|234705	PRK00260, cysS, cysteinyl-tRNA synthetase; Validated.	0
NZ_AP014522.1\|WP_041119060.1\|4440355_4440673_+\|transcriptional-regulator	gnl\|CDD\|225495	COG2944, COG2944, Predicted transcriptional regulator [Transcription].	2.77464e-16

>NZ_AP014522.1|WP_011062202.1|4444613_4445366_+|UDP-2,3-diacylglucosamine-diphosphatase
MILLISDLHLEEERPDITRAFLELLGGRARAAEALYILGDFFEVWIGDDAMTPYQLSICQALRELSDSGTQIFLMHGNRDFMLGKAFCKAAGATLLKDPSVVDFYGEPVLLMHGDSLCTRDEAYMRMRRYLRNPLSLWILRHLPLGTRRKLARKLRNESRAQTRMKANDIVDVTPDQVPQVMQEHGVRTLVHGHTHRPAIHKLQIGEQAAKRIVLGDWDRQGWALQVDEQGFQLAAFDFVPTQLALPGSP
>NZ_AP014522.1|WP_011062201.1|4444113_4444617_+|peptidyl-prolyl-cis-trans-isomerase
MTQVKLTTNHGEIVLELNAEKAPLTVANFVEYVKAGHYENTVFHRVIGNFMIQGGGFEPGMKEKKDKRPSIQNEADNGLSNDKYTVAMARTMEPHSASAQFFINVADNSFLNHSGKTVQGWGYAVFGKVIAGTEVVDKIKGVATTMKSGHQDVPADDVIIEKAEIIE
>NZ_AP014522.1|WP_041119063.1|4442142_4443843_-|glutamine--tRNA-ligase/YqeY-domain-fusion-protein
MSKPTVDPTSNSKTGPAVPVNFLRPIIQADLDSGKHTQIVTRFPPEPNGYLHIGHAKSICVNFGLAQEFGGVTHLRFDDTNPAKEDQEYIDAIESDVKWLGFEWSGEVRYASQYFDQLHDWAVELIKAGKAYVCDLTPDQAKEYRGSLTEPGKNSPFRERSVEENLDWFARMRAGEFPDGARVLRAKIDMASPNMNLRDPIMYRIRHAHHHQTGDKWCIYPNYDFTHGQSDAIEGITHSICTLEFESHRPLYEWFLEHLPVPAHPRQYEFSRLNLNYTITSKRKLKQLVDEKHVNGWDDPRMSTLSGFRRRGYTPASIRNFCEMVGTNRSDGVVDYGMLEFSIRQDLDQNAPRAMCVLRPLKVVITNYPEDQVENLELPRHPQKEELGVRKLPFAREIYIDRDDFMEEPPKGYKRLEPNGEVRLRGSYVIRALEAIKDADGNIVELRCSYDPDTLGKNPEGRKVKGVVHWVPAAASVECEVRLYDRLFRSPNPEKAEDSASFLDNINPDSLQVLTGCRAEPSLGNAQPEDRFQFEREGYFCADIKDSKPGAPVFNRTVTLRDSWGQ
>NZ_AP014522.1|WP_041119061.1|4440741_4442124_-|cysteine--tRNA-ligase
MLTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDLTYVRNITDIDDKIINRANENGEAFEALTERMIAAMHEDEARLNIKKPDMEPRATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDESKQDPLDFVLWKAAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATGKTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDKYHPEVVRYLLVASHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAGGEAFVERFTQVMNDDFGTPEACAVLFEMVREINRLRESDIDAAAGLAARLKELASVLGVLQLEADDFLQAGAEGRVDAAEVEALIQARLAARANKDWAESDRIRDQITAMGVILEDGKGGTTWRLAD
>NZ_AP014522.1|WP_041119060.1|4440355_4440673_+|transcriptional-regulator
MTKRDIFSELVEGIDALTQERQGKITLRSHKVKFDKLPPITAAEVMNIRQQLNLSRSVFAMYLRTNTRTLENWEQGRAIPNAQATTLIRLVERYPDTVERLASLA
>NZ_AP014522.1|WP_041119058.1|4440018_4440369_+|hypothetical-protein
MNALFIELPAFARYRKGFLDDELFCELQIELLRRPHAGVLIQGTGGLRKMRFIDERRNKGRRGGLRVIYYWWSGGAQFWLFTLFDKEQMDDLLPQQRQQLKQLLEREIEARRHDQT
>NZ_AP014522.1|WP_015636299.1|4438317_4439781_+|NADH-quinone-oxidoreductase-subunit-NuoN
MDFTIQHFIALAPLLITSATLVVVMLAIAWRRNHAQTFLLSVAGLNLALLSIFPVLKVAPLAVTPLLQIDQFACLYMALILVATLACVTLAHAYLGDGSSGYPGNREELYLLILLAAAGGLVLVSAQNLAGLFIGLELLSVPVYGLVAYAFFNKRSLEAGIKYMVLSAAGSGFLLFGMALLYAEAGSLSFSGIGQALAATGLPSPLAQLGLGMMLIGLAFKLSLVPFHLWTPDVYEGAPAPVAAFLATASKVAVFAVLVRLFQLSPVASSGVLSNVLTVIAIASILVGNLLALTQSNLKRLLGYSSIAHFGYLLIALVASKGLAMEAIGVYLVTYVITSLGAFGVITLMSSPYKGRDADALYEYRGLFWRRPYLTAVLTVMMLSLAGIPLTAGFIGKFYIIATGVEAHQWWLVGSLVMGSAIGVFYYLRVMVTLYLIEPNLRRVDAQLHWEQKAGGVMLLAIAVLAFFLGVYPQPLLTLVQHSGLAG
>NZ_AP014522.1|WP_019092840.1|4436777_4438310_+|NADH-quinone-oxidoreductase-subunit-M
MILPWLILIPFIGGLLCWLGERFGATLPRWIALLTMTLELALGLWLWAHGNYSYAPAPGVDPTWALEFKHQWIERFGINVHLALDGLSLLMILLTGLLGILSVLCSWKEIQRHVGFFHLNLMWILGGVVGVFLALDLFMFFFFWEMMLVPMYFLIALWGHSSADGKKTRIYAATKFFIFTQASGLIMLVAILGLVLVNFNNTGVITFDYAQLLKTKMSTATEYILMLGFFIAFAVKLPVVPFHSWLPDAHAQAPTAGSVDLAGILLKTAAYGLLRFALPLFPNASAEFAPIAMTLGLVGIFYGAFLAFAQTDIKRLIAFSSVSHMGFVLIGIYSGSQQALQGAVIQMLAHGVSAAALFILSGQLYERTHTRDMREMGGLWSRIAYLPAISLFFAAASLGLPGTGNFVGEFLILIGTFVSAPWITAIATSGLVFGSVYSLIMIHRAYFGPSKSDAVLHGMDARELIMVLGLAVLLIYIGVYPQPFLDTSAATMHGVQQWLSTAFTQLASAR
>NZ_AP014522.1|WP_041119057.1|4434884_4436738_+|NADH-quinone-oxidoreductase-subunit-L
MNLLFLTFVFPLIGFLLLSFSRGRLSENLSALIGVGSIGLSAIVAAYVIWQFNVAPPEGGHYTQVLWQWMSVDGFAPNFALYLDGLSVTMLGVVVGVGFLIHLFASWYMRGEAGYSRFFAYTNLFIASMLFLVLGDNLLFLYFGWEGVGLCSYLLIGFYYSNRNNGNAALKAFIVTRIGDVFMAIGLFILFQQVGTLNVQELLVLAPQKFQAGDFWITLATLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFTLAPEILHLVGLVGGVTLVLAGFAALVQTDIKRILAYSTMSQIGYMFLALGVGAWDGAIFHLMTHAFFKALLFLASGAVIVACHHEQNIFKMGGLWKKLPLAYASFIVGGAALAALPLVTAGFYSKDEILWEAFASGNHGLLYAGLVGAFMTSLYTFRLIFITFHGEAKTEAHAGHGISHWLPLVVLIVLSTAIGAMITPPLHGVLPQSVGHAGGEAKHSLEIASGAIALAGILLAALLFLGKRRVVTAIANSGIGRLLSAWWFAAWGFDWIYDKLFVKPYLAISHVLRKDPLDQTIGLIPRMAKGGHNSLSRTETGQLRWYAASMAAGAVLVIGAILLVAV
>NZ_AP014522.1|WP_011062193.1|4434564_4434888_+|NADH-quinone-oxidoreductase-subunit-NuoK
MPTISLGTIPMEHGLAVAGILFCLGLVGLMVRRNILFVLMSLEVMMNASALAFIVAGARWAQPDGQVMFILVISLAAAEASIGLAILLQLYRRFHTLDIDAASEMRG
>NZ_AP014522.1|WP_011062203.1|4445560_4447090_-|DHA2-family-efflux-MFS-transporter-permease-subunit
MSNNASFTPPSLLLSTIGLSLATFMQVLDTTIANVALPTISGNLGVSSEQGTWVITSFAVSNAIALPLTGWLSRRFGEVKLFLWATMLFVLASFLCGISTSMPELIGFRVLQGLVAGPLYPMTQTLLIAVYPPARRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGIFAVMVVRSQLAKRPVVTSRQPMDYVGLISLVIGVGALQVILDKGNDLDWFESNFIIIGAAISVIALAVFIIWEMTDQHPVVNLRLFAHRNFRIGTIVLVLGYAGFFGINLILPQWLQTQMGYTATWAGLAVAPIGILPVLLSPFVGKYANKFDLRLLAGLAFLAIGLSCFMRAGFTNEVDFQHIALVQLFMGIGVALFFMPTLSILMSDLPPHQIADGAGLATFLRTLGGSFAASLTTWIWIRRADQHHAYMSESMSIFDPVTRDALSNLGGASTKAYAQLDQVLTSQAYMLSTVDYFTLLGWGFMGLILLVWLAKPPFAAKAGPAAAGH
>NZ_AP014522.1|WP_011062204.1|4447167_4448370_-|efflux-RND-transporter-periplasmic-adaptor-subunit
MATAENTQAQDNSQDTGNPRKRKVMLLVLAIVVALTGAGVWAYHEFIGRWNESTDDAYVNGNVVEITPLVTGTVVSIGADDGDLVHEGQVLINFDPNDAEVGLQSAQAKLARTVRQVRGLYSNVDGMKAQVNAQQAEVQKAQDNFNRRKNLAAGGAISQEELSHARDDLTSAQNALANAKQQLKTTSALVDDTVVSSHPDVMSAAADLRQAYLTNARSTLIAPVTGYVAKRTVQLGQRVQPGTALMAVIPLDQLWIDANFKETQLRDMRIGQPVDIESDIYGSSVKYSGTVDSLGAGTGSAFALLPAQNATGNWIKIVQRVPVRIHINAEELAKHPLRVGLSTNVEVNLHDQSGPVLAQQPQQKASFSTNVYDRQLAEADAMIAQLIHDNSAVVSKTAQR
>NZ_AP014522.1|WP_011062205.1|4448384_4449854_-|efflux-transporter-outer-membrane-subunit
MSSKTLRSSLTLVLSAMILAGCANYSGLDTQGKNLDAKSLKAGQSLNGVTLSPAAWPKSDWWTSLGDPQLDGLIREALRDSPDMQIAAARAHQASAAAYAADAERYPTLDASAGISRSRLAKDQDPLGQGDAYATVRNISAGFNYNFDLWGGQRDAWEAALGQARAAEVDRQAAQLTLAADVARAYSDLGQAHIVYDLASDDLKRTRQMLDLSQRRLSAGIDSQYQLQQTQSLEASSEASLIDAEKRLSSAKIALAVLLGKGPDRGSEIARPKVLQASAVAVPSVLPAELLGRRPDLVAARWRVEAASKDIDSAKTRFYPNLNLTASAGAESLLGDAMFGSASRFFSIAPTISLPIFDGGRLRANLDSRDADYDLAVAQYNKSLVKALGDVSDTINQLRDIGRQIGAQQHATDIAQDSYNTVVQRYGSGIGNYLDVLSIEQQLLQAQRQLANLNAEQIDLSIQLMQALGGGFQGETLSAANAIPATPHN
>NZ_AP014522.1|WP_011062206.1|4449843_4450326_-|MarR-family-transcriptional-regulator
MKHFTPDEFKTCHLGLLLGRAALLKDRIIDTHMEPHGITAAQFKVLIIMAQFGVDTPAELCRHLSLDSGSMTRMLDRLEQKGFLARQRSEGDRRQVQLTLTEQGQQLTDRLPQIGADAMNELAGAISPDELKTLEYILKKILLAAGDPITIQRLGEHNEQ
>NZ_AP014522.1|WP_041119066.1|4450941_4454115_+|hybrid-sensor-histidine-kinase/response-regulator
MPHPNALLEKLASSSSRLNKSLLVLGALLLLLLGISYVGVTRMIEERRETLQFHFARLMENVHEQEVFLQDIARESVKSERLPSLMLPPYSQKPLPDEGPNIYEGRGLPFSLPYSLKINTDRIAPSQYPKIFALGTHLAAYYSAFWSASHYQSPQVALINGPDNFDLAVPSTGRLRGPGRVPMPMGDLIDAMTRLNKRLRGQNSPLPDFQVHWEPYVSSNDDKSAPTLLAYVSINLAKTALTVEGADTWVVLGSLMNLSQVNNIERLMQWSIYDDFTLITPRGVVLTGALKPGEVLDEGVNFNRDGLVFKLSSPGEHHWTAIYFISLRSFLDYALWPLLGLVALVLALLGCSRAINRWYQARVILPAQSAHASIAESEAFSRTVIDTAPTGLCVIRRSDHQVLLENQRAQQWHDNGQLMSLLTPLTGPGHADLEINGRHLHVAFVPTRYQGQDAWLCALHDVTRHVEDAAALEEARQAADSANQAKSRFLATMSHEIRTPLYGVLGTLELLGLTSLAPRQQDYLHTIQRSSATLFQLVSDVLDVSKIEAGQMTLELEDFCPLELTEDTVRTYSAFARSKGLLLYACIDPALPDRLRGDPIRIRQILNNLLSNAIKFTDNGRVVLRVQLLESDDGRAHVQWQVSDSGKGITQAQQQQLFDPFYQVNDANAQAGAGLGLAICKWLCELMAGRLNVVSEPGLGSSFILQLSLEHAPGELADCPVFGPGSAAVYVRAKVAEQAQHLMAWLKRFGLDCHPLTAGTPVSSALLVELCSLANTAAWPGPKVVATADGPNPSQLRGTVREVDAHDVRAIAWAIYQAQHGARTDSQPSSPDTPRQLNLQVLVAEDNVINSAIIKEQLEVLGCSVVVAANGELALAQWSPGRFDLLLTDVNMPVMNGYQLTTALRQLDQALPIIGVTANALREEGERCASVGMNAWMVKPLNLATLRAHLEKHCKIALPATSVAPLKLSPNMRELFVTTLRQDMQVTLTALDNADAHRVAQQLHSMAGALGAVQLEELATTFVELECRLNGMSVTSALDLEVRQNLARLKDLLDTLE
>NZ_AP014522.1|WP_041119068.1|4454136_4454373_+|hypothetical-protein
METLKVAIANDHPIVLGGYESWLSVANACALMEYLTRHFPNVLVLALTIISNPLSLTRLQEIVASRCAAVPSVLLTCC
>NZ_AP014522.1|WP_041119070.1|4454653_4455268_+|type-1-fimbrial-protein
MKKLTRALLALSIIAAAGNALAEEPVTPPVTTPANPIQAGSGTINFTGTINNDACSVEGAGKGKTIAVEMGEVSIKDMGTPSAPKGNGTLNVENFSMKINCNAGTKVAMIFKPTSGAGSGLVSGTKVLRLIDGLGAAKGIGIALLDSNGEVIDLRTASTAKIENSLQDSNATLKFSAAYVTTGTPAQAVAGRGDATLPFTLQYE
>NZ_AP014522.1|WP_041119072.1|4455340_4456090_+|molecular-chaperone
MFYRHSLSFCAGLLSLFMVNQAMAGISLSSTRLIFDGQHKEAGITVRNSGEDVLIQSWIDTDSSETAAVPFAVTPPLVRVSGDEQQILRVIYEGTGMPSDRESVVWLNVQEIPQAAKSKNTLQLAVRQRIKVFFRPAGLKNNAYLAPSELTWRLTEQAGKHLLVVNNPGRYHVSIAEITLQSGTVSEQPVESMMIAPGEQKSFPLKQLHNANTARLLFKSINDYGAQDRYGAQISNSADIRASLNKQTP
>NZ_AP014522.1|WP_041119073.1|4456175_4458665_+|fimbrial-biogenesis-outer-membrane-usher-protein
MFLLKRDRWAPFSIVLLFSTTCVADDDEQFNTSFLLGAPSSVDLQPLLASSRVLPGIYRVDLYGNETLVGRRDIDFRRPPGTSKVEACLTLEIVQQLGVDIGKLQASGKLSSDDPDACLDLPALIDHASVRYDVPRLRLIVSVPQRAMVRGRRGYVDSALWDEGVPAAFINYQLSSSRNGTRGENTLSNNIGLRNGINLGAWRLRNESNFSSSTGRPSTFESNRSYLQHDVTALKGQFSAGDIFSDADLFDSVRYRGLKLASDDGMRADSERGYAPIIRGIAQSSATVEIRQDSYLLYTANVPPGPFEISDIYPSGSNGDLEVTIIEADGRRRVTVQAFSSLPIMVREGQLKYSVSAGRYNSNSVDQKSPQFVSSTLAYGISSNLSGIVGVQASENFKALSVGTGRNTTIGAVSLDLTHSMSSTFGKTITGNSLRALYAKTFTGTDTNFTLAAYRYSTEGYRTLTEHVEELSDDGQKRIGNSKTRTDLTVNQSLGRNQRYGSAYINASDQRYWGRGGSQSLSAGYSNYWGDVSYNLGATYSKDVGNYGPANNDTLVNLSISFPLGSKPRAPRAFVSASTQKSSDTTQMGINGYLAQDSDTYYSVQAGNSSNGGSSGSVNLSTRTSFMDISAGYSQGRGYNAQNLNLSGSIVGHAGGINLGQTVGETFALAQVEGAEGVKGVKIGSFSGARTGSNGFAVIPNAQPYRVNWINLDTRDLGADIEIDSGTRQVVPRRGAVVLARYTSKTGRRVQFALFDARHQPIPFGASLEDSTGKQLAISDPGGKALALVEADTGTLTIHWQGQRCEAPYALPERDKALNYERANLVCRP
>NZ_AP014522.1|WP_041119076.1|4458669_4462347_-|translocation/assembly-module-TamB
MKRGLKITLLAIVALVILIILAVASVLGTQAGSRWALARVPGLTLENFEGRLGGHWSADHLLWQQEGNRVELNAVQFTWSPGCLLRMTLCIEQLEADQVSLLFPPSGETETSSEPISLPELKLPLAIELGQVRVGSLLFNGSEELKTLQLAAHWTAQGLQIDSLHLKRDDLSLDLSGLLQPSGDWPLTAQGNLGLPAPGGGPWSLALKVEGDLLKTLQLNADSRGYLQGQLSGQVQPLVENLPAQVRITADGFKASADLPDTLQLDQLELTGKGDLKSGYQLAGKASLPAEQGPVALLLQGKVDAKGAQIAALDLSANDKQHLKLSGQLDWSEGFAAEAKLAWLDFPWHRLYPLIDEPAVRVRSFDAEVAYRDGNYLGNFKGDLDGPAGAFSLSSPFSGDLTKIYLPQFKLAAGQGKAEGHLNLLFADGIAWDTALDLSAINPAYWVAELPGTLAGPLRSQGEMKNQQLKLNANLDLKGRLRGQPAVLQAKADGADEQWTLGALDIRLGDNRINGSGSLQQKITGQLEIKMPRLRQLWPELRGQLNGRLDLAGTLKAPQGKLDLAGQQLAFAENRLQNLKLDATLDGAQKAQVDLKGSGIQLGDTQLGTLTLAGQGDIKKQKLQLDLQGPLLKLALGLDGALDQGSWRGRLASGDVQTGGQDWKLQNPARLERLANGTLNFGAHCWASGDASLCGEDQRLMPDPKLRYHLKRFPLDSLAQWLPKDFAWKGMLNADVQLDLPASGPQGQIMLDASGGTLRVKEKDQWLDFPYQALKLNTRLTPRRIDTQLQFDGGKLGELMLQAQINPLPKSKPLSGDFRLSGLDLSVVRPFVPMVEKLSGSLNGSGRLSGGLLAPQVNGNVQLSGGEVSGSELPISLEDLQLSAQIAGESVQLNGGWKSGKAGQGSLNGNIAWGRALLVDLSLKGTQLPVTVEPYAALEVAPDLKISLQEEKLAIAGKVLIPKGQITVRELPPSTVKVSDDTVIVGQQTDDGKKPMAMAMNIDVEVGQDKLAFSGFGLTANLQGHVHIGDNMDTRGELWLNDGRYRAYGQRLTVRRARLLFAGPIDQPYLDIEAVRQTDDVIAGIRLSGSAEQPATQIFSEPAMSQEQALSYLVLGRPLTSTGEDNNMLAQAALGLGLMGSSELTGGIAKNLGIQDFQLDTQGSGNNTSVVASGAISERLSLRYGVGVFEPASTIALRYKLSKKVYLEAASGFASSLDIFYKRDF

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Crispr_ID: NZ_AP014522_3

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014522_3

4765928-4766029

Orphan

Consensus_repeat	Method
TTCGCTGGCAAGCCAGCTCCTACAA	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014522_3

>merge|NZ_AP014522|3|4765928-4766029|CRISPRCasFinder
TTCGCTGGCAAGCCAGCTCCTACAATCCGCCTCCCCGTAGGAGCCGGCTTGCCGGCGAAGGCGATCTCGCGGGCCCGTTCGCTGGCAAGCCAGCTCCTACAA

>NZ_AP014522|3|2|4765928-4766029|CRISPRCasFinder
TTCGCTGGCAAGCCAGCTCCTACAA	TCCGCCTCCCCGTAGGAGCCGGCTTGCCGGCGAAGGCGATCTCGCGGGCCCG
TTCGCTGGCAAGCCAGCTCCTACAA

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014522.1\|WP_171820727.1\|4767563_4768787_-\|SfnB-family-sulfur-acquisition-oxidoreductase	unknown	unknown	gnl\|CDD\|274924
NZ_AP014522.1\|WP_041119324.1\|4773461_4774205_+\|metal-ABC-transporter-ATP-binding-protein	unknown	unknown	gnl\|CDD\|224046
NZ_AP014522.1\|WP_011062435.1\|4754588_4754954_-\|antibiotic-biosynthesis-monooxygenase	unknown	unknown	gnl\|CDD\|367760
NZ_AP014522.1\|WP_041119320.1\|4769833_4771057_+\|PepSY-domain-containing-protein	unknown	unknown	gnl\|CDD\|225723
NZ_AP014522.1\|WP_041119322.1\|4771592_4771931_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_011062443.1\|4769069_4769537_+\|VOC-family-protein	unknown	unknown	gnl\|CDD\|319910
NZ_AP014522.1\|WP_011062440.1\|4766041_4766812_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|224381
NZ_AP014522.1\|WP_015636479.1\|4771927_4772500_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_041119316.1\|4755729_4757568_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	unknown	unknown	gnl\|CDD\|223616
NZ_AP014522.1\|WP_011062437.1\|4757564_4758209_+\|4Fe-4S-cluster-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|379137
NZ_AP014522.1\|WP_011062441.1\|4766894_4767560_-\|ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224922
NZ_AP014522.1\|WP_011062431.1\|4750432_4750996_+\|FMN-reductase	unknown	unknown	gnl\|CDD\|211840
NZ_AP014522.1\|WP_041119317.1\|4758224_4764542_+\|DUF4011-domain-containing-protein	unknown	unknown	gnl\|CDD\|224037
NZ_AP014522.1\|WP_011062433.1\|4752279_4753467_+\|acyl-CoA-dehydrogenase-family-protein	unknown	unknown	gnl\|CDD\|173852
NZ_AP014522.1\|WP_041119321.1\|4771053_4771596_+\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_011062436.1\|4755062_4755536_+\|redox-sensitive-transcriptional-activator-SoxR	unknown	unknown	gnl\|CDD\|133385
NZ_AP014522.1\|WP_041119323.1\|4772535_4773465_+\|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|238499
NZ_AP014522.1\|WP_041119318.1\|4764538_4765873_+\|hypothetical-protein	unknown	unknown	gnl\|CDD\|224117
NZ_AP014522.1\|WP_011062434.1\|4753491_4754592_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|225114
NZ_AP014522.1\|WP_011062432.1\|4751005_4752145_+\|FMNH2-dependent-alkanesulfonate-monooxygenase	unknown	unknown	gnl\|CDD\|234821

Protein	Function_ID	Function_description	E-value
NZ_AP014522.1\|WP_171820727.1\|4767563_4768787_-\|SfnB-family-sulfur-acquisition-oxidoreductase	gnl\|CDD\|274924	TIGR04022, Acyl-CoA_dehydrogenase_type_2_domain, sulfur acquisition oxidoreductase, SfnB family. Members of this protein family belong to the greater family of acyl-CoA dehydrogenases. This family includes the sulfate starvation induced protein SfnB of Pseudomonas putida strain DS1, which is both encoded nearby to and phylogenetically closely correlated with the dimethyl sulphone monooxygenase SfnG. This family shows considerable sequence similarity to the Rhodococcus dibenzothiophene desulfurization enzyme DszC, although that enzyme falls outside of the scope of this family. [Central intermediary metabolism, Sulfur metabolism].	0
NZ_AP014522.1\|WP_041119324.1\|4773461_4774205_+\|metal-ABC-transporter-ATP-binding-protein	gnl\|CDD\|224046	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism].	1.37276e-91
NZ_AP014522.1\|WP_011062435.1\|4754588_4754954_-\|antibiotic-biosynthesis-monooxygenase	gnl\|CDD\|367760	pfam03992, ABM, Antibiotic biosynthesis monooxygenase. This domain is found in monooxygenases involved in the biosynthesis of several antibiotics by Streptomyces species. It's occurrence as a repeat in Streptomyces coelicolor SCO1909 is suggestive that the other proteins function as multimers. There is also a conserved histidine which is likely to be an active site residue.	8.35903e-06
NZ_AP014522.1\|WP_041119320.1\|4769833_4771057_+\|PepSY-domain-containing-protein	gnl\|CDD\|225723	COG3182, PiuB, Uncharacterized iron-regulated membrane protein [Function unknown].	4.77891e-74
NZ_AP014522.1\|WP_011062443.1\|4769069_4769537_+\|VOC-family-protein	gnl\|CDD\|319910	cd07246, VOC_like, uncharacterized subfamily of vicinal oxygen chelate (VOC) family. The vicinal oxygen chelate (VOC) superfamily is composed of structurally related proteins with paired beta.alpha.beta.beta.beta motifs that provide a metal coordination environment with two or three open or readily accessible coordination sites to promote direct electrophilic participation of the metal ion in catalysis. VOC domain is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.	1.35902e-48
NZ_AP014522.1\|WP_011062440.1\|4766041_4766812_-\|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein	gnl\|CDD\|224381	COG1464, NlpA, ABC-type metal ion transport system, periplasmic component/surface antigen [Inorganic ion transport and metabolism].	4.54501e-108
NZ_AP014522.1\|WP_041119316.1\|4755729_4757568_+\|ATP-dependent-Clp-protease-ATP-binding-subunit	gnl\|CDD\|223616	COG0542, clpA, ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones].	5.98453e-109
NZ_AP014522.1\|WP_011062437.1\|4757564_4758209_+\|4Fe-4S-cluster-binding-domain-containing-protein	gnl\|CDD\|379137	pfam13353, Fer4_12, 4Fe-4S single cluster domain. This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	1.61617e-28
NZ_AP014522.1\|WP_011062441.1\|4766894_4767560_-\|ABC-transporter-permease	gnl\|CDD\|224922	COG2011, AbcD, ABC-type metal ion transport system, permease component [Inorganic ion transport and metabolism].	2.51271e-100
NZ_AP014522.1\|WP_011062431.1\|4750432_4750996_+\|FMN-reductase	gnl\|CDD\|211840	TIGR03566, FMN_reduc_MsuE, FMN reductase, MsuE subfamily. Members of this protein family use NAD(P)H to reduce FMN and regenerate FMNH2. Members include the NADH-dependent enzyme MsuE from Pseudomonas aeruginosa, which serves as a partner to an FMNH2-dependent alkanesulfonate monooxygenase. The NADP-dependent enzyme from E. coli is outside the scope of this model.	2.98955e-88
NZ_AP014522.1\|WP_041119317.1\|4758224_4764542_+\|DUF4011-domain-containing-protein	gnl\|CDD\|224037	COG1112, COG1112, Superfamily I DNA and RNA helicases and helicase subunits [DNA replication, recombination, and repair].	7.28953e-35
NZ_AP014522.1\|WP_011062433.1\|4752279_4753467_+\|acyl-CoA-dehydrogenase-family-protein	gnl\|CDD\|173852	cd01163, DszC, Dibenzothiophene (DBT) desulfurization enzyme C. DszC is a flavin reductase dependent enzyme, which catalyzes the first two steps of DBT desulfurization in mesophilic bacteria. DszC converts DBT to DBT-sulfoxide, which is then converted to DBT-sulfone. Bacteria with this enzyme are candidates for the removal of organic sulfur compounds from fossil fuels, which pollute the environment. An equivalent enzyme tdsC, is found in thermophilic bacteria. This alignment also contains a closely related uncharacterized subgroup.	4.08417e-148
NZ_AP014522.1\|WP_011062436.1\|4755062_4755536_+\|redox-sensitive-transcriptional-activator-SoxR	gnl\|CDD\|133385	cd01110, HTH_SoxR, Helix-Turn-Helix DNA binding domain of the SoxR transcription regulator. Helix-turn-helix (HTH) transcriptional regulator SoxR. The global regulator, SoxR, up-regulates gene expression of another transcription activator, SoxS, which directly stimulates the oxidative stress regulon genes in E. coli. The soxRS response renders the bacterial cell resistant to superoxide-generating agents, macrophage-generated nitric oxide, organic solvents, and antibiotics. The SoxR proteins share the N-terminal DNA binding domain with other transcription regulators of the MerR superfamily that promote transcription by reconfiguring the unusually long spacer between the -35 and -10 promoter elements. They also harbor a regulatory C-terminal domain containing an iron-sulfur center.	1.48214e-82
NZ_AP014522.1\|WP_041119323.1\|4772535_4773465_+\|zinc-ABC-transporter-substrate-binding-protein	gnl\|CDD\|238499	cd01017, AdcA, Metal binding protein AdcA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AdcA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).	5.63931e-117
NZ_AP014522.1\|WP_041119318.1\|4764538_4765873_+\|hypothetical-protein	gnl\|CDD\|224117	COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].	0.00611084
NZ_AP014522.1\|WP_011062434.1\|4753491_4754592_+\|sigma-54-dependent-Fis-family-transcriptional-regulator	gnl\|CDD\|225114	COG2204, AtoC, Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].	2.63834e-126
NZ_AP014522.1\|WP_011062432.1\|4751005_4752145_+\|FMNH2-dependent-alkanesulfonate-monooxygenase	gnl\|CDD\|234821	PRK00719, PRK00719, alkanesulfonate monooxygenase; Provisional.	0

>NZ_AP014522.1|WP_041119318.1|4764538_4765873_+|hypothetical-protein
MSGPKVVRIVTREEILEICAGHLRRLEQAIARWEEQAQRLGQLTEQERAATHERFKQLRQLIEADRLQDLQKQVPIEIEFLKDDLQQRENRAVQQATQQRQLARRQRENAATLLGALQGKPLAAQLLEPLRAIADGQPVPAVESILAQGFASLGAAVEEQGLSEAQQQLARRLQGEAPTQTLAQWRAAHEQAEPRLERIEQHIAQLLTLDDQASAEPYLAKLRQIDAETRVQQRNLLLDSLVLELAQATRDSQERRARLARLEELASEVATLCPATAENELAQAGQCSLAHMAPVDGLIARFSALIEAELQQRAALARRQAVLEGLASLGYEVREGMATAWAQDGRVVLRKGATPGYGVEVGGNADNGRLQVRAVALSAQRDTQRDKDIETIWCGEFQRLQALLAARGDDLSIEKALAVGAVPLREVLLDDTQQQYREQAQQRT
>NZ_AP014522.1|WP_041119317.1|4758224_4764542_+|DUF4011-domain-containing-protein
MIRFCPNCQTERPLAEIFCEGQVDNRACGWELSAEAIHPEGWRPQPVITLEALEPQPPVAADSGSPLLCGNGHAMADGDLMCLVCGADPLAPEQQPPAAPPAADSETVIEGWRLLRQISSGGVRERFIAEHRETAHQAVLTLYQAGAEPDPSVYEALKRLPREHVPEIILTGRWDERAFEVAEELTGGTLADLGIVVSDRAAVKHIVRELGQALHAFSEAGLRHRDLRPATLLVRSREPLDLVISGFGSARLSEFDLDIVSPLETSRYMAPEAIAGGVAAASDWWSLGMILLEQLTQGECFAGINANAYLIHILANGVLLPDDLDPRLELLLRGLLARDRHQRWQWPQVQAWLQGESPSVPASVASEEDAEEGASVALGSRRFRRPGPFALAAAEVEHWPQALDHLLRGVIVTWAEQAGLPARQLAGLRQVAQHEGLDDDTRLMLALKLLNPEMPLIQRGEIVTPGWLLEHPLDGYRLISGPAPDLLERLETEHWLSRLKLRAEQVRQRAQHQAIELDEEQLRIYLLSSSRARLAAQWEERQRLLPDSEHNGILSLADRRSISEEDLIVLLSAAIGQFRSVDAILEEAATLAREAVVLSFDAASARALLGLPRPALYREVDERISGFARCGVPSVDEWAEQFRLERRMPLARALVLLAIGAEQWLEPQKQHYVSQILDFFEKKVASVVLRGPLVRMSIGKTTARVDLNELHSERSPAPALLDHLVARNAQPISLDPACFAENPQLDARLNSLYRQSSLYKRDTGIDGLYLGFPFLLTRDARGTTRTRIAPLLLWPVKLLLEVGSRGKVALVFDSEREEVRLNPGLDTLLGIDAAKLWRKAADELLGRSALKAADVMDAFGMLATASSRVLGSLPPPSTEVQPYQDQLACAAVLFHVAFMGQAIGEDLRQLKALPPGGTGLETALRLNPAEPDSGDSAATALAPELQRFFTVASDPSQEAAVLQARHAPGLLVEGPPGTGKSQTIVNMVADAIGRQRSLLIVCQKHAALEVVHKRLVAEGLGNRVVMLNDINRDREPVIRSVREQLEALFKDDAVQQPWLHQRERLAARIEALEGELDRFHQSLHRIDEHCGLSYRQLIGELIGLEQGPAALDVPVLRQHLAALDIASLTRLEEACAPLIRLWLPAHYEHSALAQLQPFPTDAATVQAFNQGFERLLSCEEQRLETLQAHPADFEVDDPAPYRAWLDQHLHSLLGLDDERRQRLARWLPLFRGSNGQAAEGDGLIQALQALAQQLEQCDAAAYQADLAPGLSALPAAQLRTLQQRARAVIQGRSWLARLNPLRLIRQRQLLAFLAEQGAAAQPQRLPELLAAALLESQWRPLRAQLQHLHQQLSLAQIASDCGPGLLPQVRQDLGQLQEMRALAMTLAQAPRVEQLDAVVLTGERRSLDSLLAGYDAAFIRHSVRQDSLNALQRLDQWLQPELLGQLRQRVEHNQGNQSTLNRLRDALPTLSAYQAFRARAGQLSPADLELLVVLRDYQDTLDAIPAEQLEAVVRRMLNREARLGWKRQIEQRQPELMLEHSETAAKIASLGEADTQMRNLNRQLLSEGIELSRLGTRKQWEDVTRLTGRRSRRLREFMEMGAGLGLMSLRPVWLMNPDVASRVLPLKPGLFDTVIYDEASQMPVEFALPTLYRGRVTVVSGDEKQMPPTAFFSSRVESDEAELFDGDQPDADADEEQREAFEDTWNRREIKDCPDLLQLARSSLPSTTLQIHYRSAYRELIGFSNASFYGNRLSIPVRHPQANILAIKPLELIRVDGVYQQQVNPDEAERVVDYLAELWQAPYAERPSVGVVTFNRKQADLIEERLELRAEQDPAFRAAYSQERERSEDGEDMSVFVKNVENVQGDERDIIVFSSTFGRNSQGSFRRNFGVLGQTGGERRLNVAVTRARRKVVMITSMPIADISDMLTTQRPPASPRDYLQGYLEYARALSAGEFASGHSLLGRLVTERQDARVQHNAHSDGFTQAVAAFIRTLGWSPVSANEGDAFGLDFAIEHPDTGLYALGIECDTPRHGLLARARSREIWRPSVLRRAIPHLHRVSSQAWYHDPQSERARLQAAIEQALQPLAGADSVMQPQALADTEQTP
>NZ_AP014522.1|WP_011062437.1|4757564_4758209_+|4Fe-4S-cluster-binding-domain-containing-protein
MNISLSRVHFPVTTLGPGQRLGLWFQGCSIRCAGCISADTWGPGKHPLPLAQVLDDLQPWLARAEGITLSGGEPFDQPEALLALLRGLRERTGVDILVYSGHSLETLQPLLQQAEGLLDALICDPFEQQQAQTLVLRGSDNQRLIFLTELGRQRLSTYQRPLHHEDRALDVMFDDDGSVWMAGIPRRDDVLRLRDLLHDQGHQLQISAHTSRRR
>NZ_AP014522.1|WP_041119316.1|4755729_4757568_+|ATP-dependent-Clp-protease-ATP-binding-subunit
MPRTATFEKPRWLRDLLRFLPLKSQFVLSGNVRDLQASEVAPGVITPQPFNLNLRDELLAAGYAQVLSWDPLGGLRVLLPPGSEPAQADNLLRELGLTPVDGAAPAGLDLLSATLPRLVERQGAPLALIVDFASRLVIRNDALSAAEHQLFTQALVLSHQARSRPAGEQRTPFFNSILWVVEKEGDLPDWMLIDNPRLRPIPVSKPDQQARQALAPALLRGLPGAQEASEESRDNAVRAFVENTEGLLLLDLNAIVQLARVEGLAMERIGDAVRRYKVGVTEDPWLKIDRQRIRQADGFIRQRVKGQGHAVTHMLDIVKRAMTGVGASRKGNRPRGVAFLAGPTGVGKTELAKTITSLLFGDESAYIRFDMSEFSAEHADQRLVGAPPGYVGYDVGGELTNAIREKPFSVVLFDEIEKAHPRILDKFLQILDDGVLTSGRGDRVYFSEALIVFTSNLGIYRQGDNGERVANVQPGEAFEAVQGKVQGEIERYFKLVLNRPEILNRIGENIIVFDFIRPDIAEQIFQQMVGNILADLAAQALHVQLDDDSLHNLRQLCLQDLSNGGRGIRNQLEAHLLNPLARALFDQDAQPGQSFEIRQLQAGGLQLLARAS
>NZ_AP014522.1|WP_011062436.1|4755062_4755536_+|redox-sensitive-transcriptional-activator-SoxR
MIEPDSRHKELSVGQLSARSGVAVTALHFYETKGLIHSHRNAGNQRRYPRSVLRRVSLIKVAQRLGIPLAEIGQALATLPADRAPTAADWQRLSEQWSRELDERIRQLSLLRERLNQCIGCGCLSMEGCPLRNYGDALGDAGPGARLLEPDAATDTP
>NZ_AP014522.1|WP_011062435.1|4754588_4754954_-|antibiotic-biosynthesis-monooxygenase
MSAFEKTRSFTQLIEFEIEPHQQQALVSALAEQTERLAQGYGGFLSASVQASDDGRRVLNYLQWQSREAGEAAFRRFENGEQDFWQLILAHQAKTVTFGSFQVRSSIARSHDNALHCDLPG
>NZ_AP014522.1|WP_011062434.1|4753491_4754592_+|sigma-54-dependent-Fis-family-transcriptional-regulator
MQLLTLPPSPALATSIRATAQVFEDPKSQALLAHLQQVAPSEASVLIIGETGTGKELVARHIHNLSARRNRPFVAVNCGAFSESLVEAELFGHEKGAFTGALSAKAGWFEEADGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGSRKSIPIDVRVLAATNVQLEKAINAGHFREDLYYRLDVVSLELSPLRERPGDILPLTRHFIEAYSQRLGYGSISISPEAEHKLKSYSWPGNIRELENVIHHTLLICRNGVIQRDDLRLSNMRIERADDSHPSHDDSAEALLERAFEKLFAEQAGALHEKVEDALLRAAYRFSHYNQVHTANLLGLSRNVTRTRLIKIGELAVNKRRPIDAPNERTLQLSI
>NZ_AP014522.1|WP_011062433.1|4752279_4753467_+|acyl-CoA-dehydrogenase-family-protein
MTAKPQSALLSPLQTARQLAAEFALTAVERDERGGTPKAERDALRQSGLLALSIPSQFGGLGAPWSETLNIVREFARVDSSIAHVFGFHHLMLATVRLFAKPEQWQPWFEQTARKNWFWGNALNPLDTRTVVRNLGGWREFSGKKSFCSGASDSEMLIASAVDESNGGKLLIAAIPSGRSGITLHHDWNNIGQRQTDSGSATFERVRVEESELLLDPGPLSTPFACLRPLIAQLTFTHMFLGIAEGAFEEARQYTLGETRVWHKSSAQDVRQDPYILSHYGEFWVALEGIRLLVERAAALLDQAWAKGPALSAEERGHLATAIATAKVAASRQGLELCSRLFEVTGARSTHASLGLDRHWRNLRTQTLHDPLDYKLHELGDWALNQSLPTPTFYS
>NZ_AP014522.1|WP_011062432.1|4751005_4752145_+|FMNH2-dependent-alkanesulfonate-monooxygenase
MDVFWFLPTHGDGHFLGTAQGARPVTLNYLKQVAQAADSLGYHGVLIPTGRSCEDSWVIASALVPLTERLRYLVAIRPGIISPTVSARMAATLDRLSNGRLLINVVTGGDPDENRGDGSFLSHSERYEVTDEFLQIWRRVLQGEAVDFEGKHLHVQNAKALYPPVQKPYPPLYFGGSSEAAHELAADQVDVYLTWGEPPAAVAQKLADVRERAARKGRTVKFGIRLHVIVRETEDEAWKAADKLIEHISDDTIAAAQQSFSRFDSEGQRRMAALHGGRRDQLQIAPNLWAGVGLVRGGAGTALVGNPQQVAERIKEYADLGIESFIFSGYPHLEEAYRFAELVFPLLPEPYASLAGRGVTNLTGPFGEMIANDVLPNSR
>NZ_AP014522.1|WP_011062431.1|4750432_4750996_+|FMN-reductase
MSRPLNVVALSGGTWRPSRTLVLTQALLAELSGHLSFNAHLIELGDIARPVGAALSRQELPAEVEAELQAIENADLLIVAAPVYRGSYPGLLKHLFDLIDLNALIDTPVLLAATGGSERHALVLDHQLRPLFSFFQALTLPIGVYATEADFSNYQITSELLKARIQLAAERAAPLFRAHPTHLLKIA
>NZ_AP014522.1|WP_011062440.1|4766041_4766812_-|MetQ/NlpA-family-ABC-transporter-substrate-binding-protein
MKKTLAVLAAVLSLSVNANEKLLVGATPVPHAEILEFVKPQLAKEGVDLQIKVFTDFIQPNQQLALKNLDANYYQYRPFLDDFNKTRHTDLVPVVGVHIEPFGAYSTRIKSIAELKDGASVSIPNDPVNTGRALVLLDEAGLIKLKDPSNTLATQRDIVENPKHLKIRELEGALLARSVSQVDLAFVFANYALEAGIDTNSALIVEKGKDLYIEFLVARPDNINDPRIQKLAKALNSDAVRQFILTRYKGQIAPGF
>NZ_AP014522.1|WP_011062441.1|4766894_4767560_-|ABC-transporter-permease
MAELFKNIYWADIAQACVDTLSMLGAALGFTVLLGLPLGVLLFLTGKRQLHEAVGLYRVLSVLVNMLRSLPFIILLIVLIPLTTLLVGTSLGVPGTIPPLVVGCTPFFARLVETALREVDRGVVEATQAMGGSTWQIIRHTLLPEARGGLLAAVTVTAIVLVDYTAMAGVIGGGGLGDLAIRYGYQRFQTDVMVVTVVLLLVLVQALQMTGDRLVAHYSRR
>NZ_AP014522.1|WP_171820727.1|4767563_4768787_-|SfnB-family-sulfur-acquisition-oxidoreductase
MPALPESAVYPLHTPAAHVIRDGAEALAVARQVAAILLEQDAERDRTREVPAQVVDLYSNSGLWGISVPREFGGAQVSYAVLAEVIAIISAADPSLGQIPQNHYCLLEDIRLQGTPEQQAHFFTLALQGHRFANALSETGGKNVQDIQATVRRSGDGYVINGRKGYCTGSLYAHWLAVLALDEQGRGQLAFVPRGSEGLAVIDDWDSIGQRTTSSGTVLAQDLKVPAFNLFPTYRSYESPTLAGPFAQLTTAAIDAGIARAALRDTIAFVREHARPWIDAGVEKASEDPLTIIQVGALEIRLEAAEALLERAGLALDAARPAPDEDNVARASLAVAKAKVLTTEIAIEASNKLFELGGTRSTLKRHNFDRHWRNARVHTLHDPVRWKYHVVGNWLLNDIKPPRHDWS
>NZ_AP014522.1|WP_011062443.1|4769069_4769537_+|VOC-family-protein
MSVNPIPEGFSGVTPYLGIQRAAEAIEFYKKAFDAVQIMRLDMPDGRVGHAELRIGGSAIMLGSPCEQTPMGSPEAHKTSVGLHLYVEDVDSRFAQAIAAGGTEVSAVKDQFYGDRSGSLRDPFGHVWFLASRKEELSAEEIGRRAREMFQQQAG
>NZ_AP014522.1|WP_041119320.1|4769833_4771057_+|PepSY-domain-containing-protein
MSKKSRSKIWFLVHSWLALPIWFFVLIVCVTGTLAVVSQEIVWLANPDVRASKPSDDAQPLNYDQIVQAIKRAEPQTRVDTIVTPDESHFALSVSVSYPDGRSPTLYVNPYTGVIQGTSPQFDFQGFTRALHGWWLVPFTNGYSWGWYLVSLLGLPMLVSLITGLVVYKKFWKGFLKPTLRLRHGARIFWGDFHRLSGIWSIWFIAVISITGTWFMIEAILSDNHISISSEPVVPVIAREQVPTTGDGSPAPMIGLDQAIGIATQKIPGFDISFVSLPSNAYSHLYVGGRGWYPLMYQTANINPYTGSLDTSHLLADRNTLEFVTESMRPLHTGDFGGLWIKLIWFFFGLVLSMMVLSGLLIWTKRTALATANALKREEKAARARPASKPVPTPTPAMSIETSESHS
>NZ_AP014522.1|WP_041119321.1|4771053_4771596_+|hypothetical-protein
MSQTHSATAPSLLSRLWHKWRFHLNILLLLIPLGFMPKYFADVALFRGESGLGEREIGEVQVGPWSLRLAEMRNEAPRSDGPAGYLKSFNAALCQACIEPVKATYLRIGKPRSLRAAGVIFFGSPYRMGASLPIPEKTKADSELWITMEGWDGSMHQASIPLSQASPATVAWLEKQGGKR
>NZ_AP014522.1|WP_041119322.1|4771592_4771931_+|hypothetical-protein
MSCAVSTRRLGAVALLLLGGAFSHSALAHNPMCECKAIDAEQIRCTGGFSDGSGAPGVTLDVIGYDETILVPGKLGADSTLTFKKPSSEFYVLFDAGPGHVVEIDQADIEAP
>NZ_AP014522.1|WP_015636479.1|4771927_4772500_+|hypothetical-protein
MTPATTQVVRPAGAGHETLYVLLLCALILSVAATVVLWRGEETATGSVASHQLDARRDLSAGEQGIYADLRVTLDEIHLLRAESQDLPTPEELAGEGFAPFAQDASSVSRGGHIWTVQNQAYLGLSQNPQVAGSFLMRIDAEDDTQVDIWLNRAPSAALPADLGDEPLAAAGWQQVVAQFDAGVTRQHRH
>NZ_AP014522.1|WP_041119323.1|4772535_4773465_+|zinc-ABC-transporter-substrate-binding-protein
MPISSQRRPFLQVLLVSLLALMLSPLASADPAKRLRIGITLHPYYSYVANIVGDKAEVVPLIPAGFNPHAYEPRAEDIKRIGTLDVIVLNGVGHDDFADRMIAASERPDIPVIEANENVPLLAATGVAARGAGKVVNPHTFLSISASIAQVNNIARELGKMDPANAKTYTQNARAYGKRLRQMRADALAKLTQAPNADLRVATVHAAYDYLLREFGLQVTAVVEPAHGIEPSPSQLKKTIDQLRELDVKVIFSEMDFPSTYVETIQRESGVKLYPLSHISYGDYSAEKYEKEMKGNLDTVVRAIQEAGA
>NZ_AP014522.1|WP_041119324.1|4773461_4774205_+|metal-ABC-transporter-ATP-binding-protein
MTAIETLLRGPAIEFDQVSLTLGNTTILDHVTFQVQPGSVHALVGPNGGGKSSLIKTLLGQMPHQGQLRLQWPDAPGTLGYVPQALEFDRGLPMTVDDFMAAMCQRRPAFLGLSRHYAQAIGEALERVGMQDKRKRRMGALSGGERQRVLLAQGLIPAPQLLVLDEPMSALDEAGIQVFERLLHDWRQSGITLLWIEHDLEAVGRLADRVTGLNRRVLFDGPAQQTLTPERLLSLFSTHPRTAGSAA

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Crispr_ID: NZ_AP014522_5

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014522_5

4786844-4786984

Orphan

Consensus_repeat	Method
AGCCGGCTTGCCGGCGAAGGCGTCCTTCAGGCTGGCGCATGG	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014522_5

>merge|NZ_AP014522|5|4786844-4786984|CRISPRCasFinder
AGCCGGCTTGCCGGCGAAGGCGTCCTTCAGGCTGGCGCATGGCTTTCGGGCCTCTTCGCTGGCAAGCCAGCTCCTACAACACGTATCCCCGCCCGTAGGAGCCGGCTTGCCGGCGAAGGCGTCCTTCAGGCTGGCGTATGG

>NZ_AP014522|5|4|4786844-4786984|CRISPRCasFinder
AGCCGGCTTGCCGGCGAAGGCGTCCTTCAGGCTGGCGCATGG	CTTTCGGGCCTCTTCGCTGGCAAGCCAGCTCCTACAACACGTATCCCCGCCCGTAGG
AGCCGGCTTGCCGGCGAAGGCGTCCTTCAGGCTGGCGTATGG

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014522.1\|WP_041119325.1\|4777857_4779270_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235892
NZ_AP014522.1\|WP_041119337.1\|4808307_4809924_+\|acyl-CoA-carboxylase-subunit-beta	unknown	unknown	gnl\|CDD\|227136
NZ_AP014522.1\|WP_011062459.1\|4784253_4785021_+\|thiol:disulfide-interchange-protein-DsbG	unknown	unknown	gnl\|CDD\|183262
NZ_AP014522.1\|WP_015636494.1\|4805633_4807424_+\|DUF1446-domain-containing-protein	unknown	unknown	gnl\|CDD\|377804
NZ_AP014522.1\|WP_041119334.1\|4789511_4802528_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|235564
NZ_AP014522.1\|WP_019095084.1\|4803932_4804727_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|214497
NZ_AP014522.1\|WP_011062465.1\|4802901_4803450_+\|RNA-polymerase-factor-sigma-70	unknown	unknown	gnl\|CDD\|180803
NZ_AP014522.1\|WP_041119333.1\|4788246_4789284_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_019095082.1\|4807434_4808304_+\|SDR-family-oxidoreductase	unknown	unknown	gnl\|CDD\|187627
NZ_AP014522.1\|WP_041119330.1\|4785231_4786044_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_AP014522.1\|WP_041119326.1\|4779505_4780831_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|182388
NZ_AP014522.1\|WP_011062453.1\|4777550_4777775_-\|MbtH-family-protein	unknown	unknown	gnl\|CDD\|225790
NZ_AP014522.1\|WP_052470423.1\|4787048_4788098_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_041119335.1\|4803483_4803843_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_041119327.1\|4780831_4781509_-\|response-regulator	unknown	unknown	gnl\|CDD\|182612
NZ_AP014522.1\|WP_019092942.1\|4776299_4777127_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_AP014522.1\|WP_041119331.1\|4786152_4786509_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_015636493.1\|4804823_4805447_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_AP014522.1\|WP_041119328.1\|4781663_4783415_+\|protein-disulfide-reductase-DsbD	unknown	unknown	gnl\|CDD\|234717
NZ_AP014522.1\|WP_041119329.1\|4783414_4784278_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264

Protein	Function_ID	Function_description	E-value
NZ_AP014522.1\|WP_041119325.1\|4777857_4779270_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235892	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional.	0
NZ_AP014522.1\|WP_041119337.1\|4808307_4809924_+\|acyl-CoA-carboxylase-subunit-beta	gnl\|CDD\|227136	COG4799, COG4799, Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism].	0
NZ_AP014522.1\|WP_011062459.1\|4784253_4785021_+\|thiol:disulfide-interchange-protein-DsbG	gnl\|CDD\|183262	PRK11657, dsbG, disulfide isomerase/thiol-disulfide oxidase; Provisional.	1.18023e-149
NZ_AP014522.1\|WP_015636494.1\|4805633_4807424_+\|DUF1446-domain-containing-protein	gnl\|CDD\|377804	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA. This family consists of several bacterial and plant proteins of around 400 residues in length. One member of this family has been characterized in Pseudomonas citronellolis as AtuA, a member of a gene cluster that is essential for the acyclic terpene utilisation (Atu) pathway.	2.21043e-172
NZ_AP014522.1\|WP_041119334.1\|4789511_4802528_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|235564	PRK05691, PRK05691, peptide synthase; Validated.	0
NZ_AP014522.1\|WP_019095084.1\|4803932_4804727_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|214497	smart00062, PBPb, Bacterial periplasmic substrate-binding proteins. bacterial proteins, eukaryotic ones are in PBPe.	3.08235e-11
NZ_AP014522.1\|WP_019095082.1\|4807434_4808304_+\|SDR-family-oxidoreductase	gnl\|CDD\|187627	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR. TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs.	5.27918e-101
NZ_AP014522.1\|WP_041119330.1\|4785231_4786044_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	8.90519e-42
NZ_AP014522.1\|WP_041119326.1\|4779505_4780831_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	2.30107e-54
NZ_AP014522.1\|WP_011062453.1\|4777550_4777775_-\|MbtH-family-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	2.42909e-33
NZ_AP014522.1\|WP_011062465.1\|4802901_4803450_+\|RNA-polymerase-factor-sigma-70	gnl\|CDD\|180803	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated.	6.69022e-107
NZ_AP014522.1\|WP_041119327.1\|4780831_4781509_-\|response-regulator	gnl\|CDD\|182612	PRK10643, PRK10643, two-component system response regulator PmrA.	2.31786e-77
NZ_AP014522.1\|WP_019092942.1\|4776299_4777127_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.36752e-11
NZ_AP014522.1\|WP_015636493.1\|4804823_4805447_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	7.11327e-22
NZ_AP014522.1\|WP_041119328.1\|4781663_4783415_+\|protein-disulfide-reductase-DsbD	gnl\|CDD\|234717	PRK00293, dipZ, thiol:disulfide interchange protein precursor; Provisional.	0
NZ_AP014522.1\|WP_041119329.1\|4783414_4784278_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	4.27501e-33

>NZ_AP014522.1|WP_041119331.1|4786152_4786509_-|hypothetical-protein
MKKLVPDPPTSYRDPALKAANATLRVALARQPLDPAVFQLTTQAKPVSPDSLFSVREGVSAEEALVHVALLLKCAEEVCDEITQQGSGLERGLIWSMVHSVEMARAVVEALLDGQRGA
>NZ_AP014522.1|WP_041119330.1|4785231_4786044_-|alpha/beta-fold-hydrolase
MPFATLDGQPLHYLDQGQGPVVFLAGSYLWDTSMWAPQIEALSAQYRVIAVDLWGHGQSGPLPAGTASLDDVARQMLALLDHLQIERVTLVGLSVGGMWGARLALAAPQRIDGLVLMDTYLGAEPEPTRQYYFSLFQQIEDSGLIAEALLDIVVPIFFRPGIDRQSALFQDFRASLAALPAEGLRQSVIPMGRITFSRADVLDQLAHLDARNTLLLCGDQDQPRPPAETIEMAERIGCPYQLVPEAGHISSLENPEFVTRALLGFLQRNG
>NZ_AP014522.1|WP_011062459.1|4784253_4785021_+|thiol:disulfide-interchange-protein-DsbG
MPFIRHLLSLSLGAALLNAPLLQAEELPAPIRKIEEKGAKIIGSFDAPDGLKGYAAQYQNRGMTLYLTPDGKHVLLGNLYDADGKDLSAEPLQKLVYAPMAKEVWGNLEKSNWIADGKADAPRIVYLFSDPNCPYCNMFWEQARPWVKAGKVQLRHIMVGIIREDSPGKSAALLAAKDPQQALQDHEKAGKGSALKPLASIPAAVQAKLDANMKLMEELELSATPAIFYLDDKGELQQQQGAPAPGKLTQILGPK
>NZ_AP014522.1|WP_041119329.1|4783414_4784278_+|TlpA-family-protein-disulfide-reductase
MLTFTIGTFAIALNHLLLISALALATLVGWRVAKRGGDNPESVLFSLFLLGMLAARISFVIAYWKHYRHDLWMIIDLRDGGFLAWPGVILMLLAALAWGWKRPALRRPLGAGVASGLAFWLLATLALTLYDQGTRLPEVALRNAAGETVQLTDYQGGPLVINLWATWCPPCRREMPVLERAQQQRPDLTFLFVNQAESMQSVSTFLATQDLNLNNVLFDGSGRLGKAVGSMALPTTLFYSADGRLLGSHLGELSEASLARALENFDGAHPTSVAPSRKLPCPSSATC
>NZ_AP014522.1|WP_041119328.1|4781663_4783415_+|protein-disulfide-reductase-DsbD
MRRLFILLFMLFTTLAQAGNNPFEVKPDFLPVGKAFVFTSERLPSGETQLFWQIADGYYLYQKRLKFDGLPPEQQPTLPAGEDHSDEFFGQQTVYRQGLEVKLPAAASGKIKLGWQGCADAGLCYPPQTLEVDLGGAPTVAAANSATTSNGSAQDQLLANELQQKSWGLGLLAFFGFGLLLAFAPCSLPMLPILAGMVVGSGASPRRGLALASSYVLCMALVYAGMGVIAALLGSNLQAWLQQPWVLGSFAGLFVLLSLPMFGFFELQMPAVLRDRLEGASRQRQGGSLIGCGALGALSALLVGPCMTAPLAGGLLYIAQTGNALFGGLALFALGLGIGLPLLLLVTVGNRFLPKPGPWMNLLKGVFGFLFLGTAIYMLRPVLGASLWIGLWGALALVLAYCAWQQRAIAGRLVHAFGASSVLFGIWGSMLLVGAAGGSDELWRPLKVYSGGGVASSVTAHDAFTTVKSPAELQSALDNAQAQGQWVLLDYYADWCVSCKIMEKTVFGQPQVLDALKDVRLLRLDVTLDNADGRELLSRYKVPGPPSMLWIGPDGSERRSQRITGEVDASTFLQRWTQTREAR
>NZ_AP014522.1|WP_041119327.1|4780831_4781509_-|response-regulator
MHVLVCEDDELIASGIVAGLTAQGLTVEHVATASAARAMLGVADFDVMVLDLGLPDEDGLKLLKQQRQQGLEIPVLILTARDSVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRSVNLIEHGRLTYDPSTRETLLGGQPVDLSRREQSLLQALLHNRGRVLSSEQLKDSVYGFNDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPADGEENP
>NZ_AP014522.1|WP_041119326.1|4779505_4780831_-|two-component-sensor-histidine-kinase
MRSLRLRLSMTLGAAFILIWALAAAWMLSDLRNQMMFSLDQRLVASARMVAGLLEQMPTLPSHAPGNQINSAALTIPGGMACQVSSLRGQILARSHSTPEHPLEAEKLGFHDQMIDGAPWRTFTLVRGDMRITTADRQVEREALNMSVLLAASVPVGVALLGCLWLLWLGIGQSLAPLNRIRDALMRRSADSLEPLQIQPMPSELRPLLETQNQLFQRIAKTIERERRLTGDAAHELRSPLTAIKTHLQVARMTEGAARDQSLARAEEGADRMHRTLEQLLLLARVEGSLSFDDGVHCNAEQVARLAIQDAAVGARARVKLHMQGKAGEAAVEMPSTLAIAALRNLLDNALRHTPEECPVELNLETVGARVRFQVRDHGSGIPAQDLQHLTQRFWRDSQSSGCGLGLAIVQAIVQRCGCELNFDSRPDGLRVELTLPAHRA
>NZ_AP014522.1|WP_041119325.1|4777857_4779270_-|aspartate-aminotransferase-family-protein
MSAVTSLMEDSPVGLGAAPQETLYQFDESPLLARQSRQESNARSYPRRIPLALKRASGIHVEDVEGRRFIDCLAGAGTLALGHNHPVVIAAIQQVLADELPLLTLDLTTPVKDQFVQDLFGLLPEALAAEAKIQFCGPTGTDAVEAALKLVRTATGRSTVLSFQGGYHGMSQGALSLMGSLGPKRALAGLLNNGVQFLPFPYDYRCPFGLGGAEGVKVNLHYLENLLTDPEAGVALPAAVIVEAVQGEGGVIPADLEWLQGVRRITEKAGVALIVDEIQSGFGRTGKMFAFEHAGIIPDVVVMSKAIGGSLPLAVMVYRDWLDSWQPGAHAGTFRGNQMAMATGSAVMRYLKEHRVPEHAAAMGERLREHLLILQRDFPQLGDIRGRGLMLGVELVDPAGAPDAQGHPPQHARLAPLVQRECLKRGLILELGGRHGAVVRFLPPLIITAAQIDQVAQIFSKAVAAAVASL
>NZ_AP014522.1|WP_011062453.1|4777550_4777775_-|MbtH-family-protein
MTSVFDREDILFQVVVNHEEQYSIWPDYKAVPQGWRTVGKSGFKKDCLAYIEEVWTDMRPLSLRQKMDQQAVAG
>NZ_AP014522.1|WP_019092942.1|4776299_4777127_+|class-I-SAM-dependent-methyltransferase
MSDYVKLNKTNWDERAPLHAASADYAVQRFVDEAGYLSDVVQFDRPLLGNIRGLRGVHLQCHIGTDTLSLARLGAQMSGVDFSPASLAEARTLARRCNTPIDYHESDVFLAAEVLPQGNFDLVYTGIGALCWLPSIERWAQTVGALLKPGGRLFIREGHPMLWAINEDHHDSLRVELPYFETREPLVWDDENTYVETDSPLKATMTHEWNHGLGEIISALLAQGLDITGLVEHQSIPWEALPGQMVVDERGEWRLKEAPWRLPLSYTLQAVKRGG
>NZ_AP014522.1|WP_052470423.1|4787048_4788098_-|hypothetical-protein
MEQIFWRDIEDLAGHWNGLGVDVKCSANSKPNLCLLSGNNRRMQLVLGDQTLLWGTMSRCLYGVWLVRNHLQEQLPQTLVGPIDSPQVEQQARLDPAQRLKAWSRFFVEQLMQYQPDFFYPGYWLVRALRPQSQKPLRPLLSGTEAWYFKGGEDAQSHMPQWAIYGRNILDNQQPGSARWVELYEGGGAVVGLHAVDPHSGRLKWWRKKAREGSLPPILLWYVSGLNCHLILDGHYRLQAAIDENLPPEFLVLSTPRLYHYRPNPQEQQKVLGALQVQVQRNNLDTRRFNQLLISTFDDRPYHGFGSQSWAGIASEQAWIDQVSGILKERGDLSDLEEILEREAPEEYR
>NZ_AP014522.1|WP_041119333.1|4788246_4789284_-|hypothetical-protein
MAEQLYWRDIEDSLGNWSGLGVEVEPGPTNRPPLYLRTGANARIKLMHHDTPLFWATFAWDHGGVWLVRNPLAEGAECRMLAPIDSPTVQQYAALAPELRIKAWSRYFVSRLSESARHFLTPGFWLAQSLLPEPSSTANGLDHWRFTSVIDPLTHVPSWHLYGEDFLDNLQPQTLEWIDWWHGGGKLIGLHRVDPQAGRLKWWRKKAREGSLPPILLWYVGGLASYVVIDGHYRLQAAIAENLAPSFIVLSATRERDFTPSLEHQQRVMDSLRKRGDAVPRNPALSTENLNRVLIQAFDDRPQYRSATPAWAGNEPESQWCDEVRQCLNGQGLEDQMEAVIARRG
>NZ_AP014522.1|WP_041119334.1|4789511_4802528_-|non-ribosomal-peptide-synthetase
MTDAFELPSTLAQALQRRAVLAPDQVALRFLAEEQDQSVVLSYRDLDLRARTIAAALQANAEFGDRAVLLFPSGPDYVAAFFGCLYAGVIAVPAYPPESTRRHHQERLISIMADAEPRLLLTSAGLRDSLLQMDELKAAGAPQLLCVDTLQAGLAEDWQAVALQDDDIAFLQYTSGSTALPKGVQVSHGNLVANELLIRRGFGIDLNPDDVIVSWLPLYHDMGLIGGLLQPIFSGVPCVLMSPAYFLARPVRWLEAISEYGGTISGGPDFAYRLCSERVSESALERLDLSGWRVAYSGSEPIRLDTLERFAEKFSACGFSHENFLASYGLAEATLFVAGGVRGQGIPALHLDDQALAQNRAEPGQGSAMMSCGFSQPEHAVLVMDPQQLGELPDNRIGEVWAAGPSIAHGYWRNPEATAKTFVQHAGRTWLRTGDLGFIRDGELFITGRLKDLLIVRGHNLYPQDIEKTIEREVEVVRKGRVAAFAVTEQGQEGIGIAAEISRSVQKILPPEALIKAIRQAVAEACQEAPSVVVLLNPGALPKTSSGKLQRSACRTRLADGSLDYYALFPQAGSATADAADSAGDALQTLIGRIWQEQLQCASVAADDHFFLLGGNSIAATQVIARLREELGLELGLRLLFEAPTLGAFSAAVARQQQDGGVAQGSINALSRQQPLPQSLAQNRLWITWQLDPQSSAYNIPGGLRLRGELDEEALRASFQQLIQRHEALRTRFFERDGQALQQVDAAGEFNLQVIDISDLPPAEREARARQIREDEARTQFDLEKGPLYWATLVRLDDEEHQLLLTLHHIIADGWSLNLLIDEFSRLYAAAAQGHSLELAPLALQYADYGSWQRQWLAQGEGQRQLDYWKQQLADEAPVLNLATDHPRSAQVRHSAARHDLRLSASLSEAVRQTAQARQATPFMLLLAAFQTLLHRYSGQSDIRIGVPNANRPRLETQGLLGFFINTQVLRGQLDSRQSFADLLQQTRRTTLEAQAHQDLPFEQLLEAFPEAREQGLFQVMFNHQQRDLSTLRRLPGLLAEELPWHSREAKFDLQLHSEEDRNGRLSLAFDYADELFDAASIQRLAGHFISLLEHACLQPDCALGDLPLLGNAEAAQLQQWSVAPCAPAEQWLPERLHEQLRQSPERTALVWDGGQLGFAELHAQASRLAHYLRDKGVGPDVCVAIAAERSPQLLIGLLAIIKAGGAYVPLDPDYPAERLAYMLEDSGVGLLLTQTHLLGRMPEAPGVSAIAMDSLKLDSWPSHAPGLHLHGEHLAYVIYTSGSTGQPKGVGNTHRALMERLQWMQDSYQLQADDVLMQKAPISFDVSVWECFWPLITGCRLLIAAPGEHRDPHRIAQLVQEYGVTTLHFVPPLLQLFVDEPLSAECHSLRRVFSGGEALPAELRNRLLQQLPNAQLHNRYGPTETAINVTHWQCSVDDGERSPIGRPLGNVVCRVLDTDLNPLPAGVPGELCISGQGLARGYLGRPALTAERFVVDPLSEEGARLYRTGDRVRWCADGVLEYLGRLDQQVKLRGFRVEPQEIEARLLAQDGVAQAAVLVRDTLAGPQLIGYYTPNAHDEDEQQQSARLKTALAAELPEYMVPAQLLRLDAMPLSPSGKLDRRALPEPQWQVREHVEPSTELEQQIAAIWREVLGQPRIGLKDDFFALGGHSLLATQIISRTRQACDVELPLRALFEASELGAFAEQVLLIQQSGARNQQPPIARVDRSQPVPLSYSQQRMWFLWQMEPDSPAYNVGGMARLSGVFDVGRFEAALQALILRHETLRTTFPSVNGVAHQQVHADTGLRMAWKDFSALAPDARQQRLQQLADSEAHQPFDLETGPLLRACLVKAGEQEHYFVLTLHHIVTEGWAMDIFARELGALYEAFLDDRESPLEPLPVQYLDYSVWQRQWLESGERQRQLDYWTGQLGREHPLLELPSDRPRPAVQSHQGELYRFDLSDELAARVRAFNAEHGLTLFMTMTAALSLLLYRYSGQSDLRIGAPVANRIRPESEGLIGAFLNTQVLRCQLDGQMSVGQLLEQIRHTVIEGQSHQDLPFDHLVEALQPPRSTAYNPLFQVMCNVQRWEFQQSRQLAGMTVEYLVNDARATKFDLNLEVTDLDQRLGCCLTYSTDLFDEPRIARMAGHWRNLLEALLSDPQRRLCELPLLQADEQQHLLDSLSVEPGEQRLDQCIHHLFSEQALARRDAPALTFAGQTLSYSELDSRANRLAWMLRERGVGPQVRVGLALERSLEMVVGLLAILKAGGAYVPLDPEYPLDRLHYMIEDSGIGLLLSDARMFAALGELPAGVGRWCLEEDGALLADYPAGELPFISLPQHQAYLIYTSGSTGQPKGVVVSHGEIAMHCQAVIRRFGMRPDDCELHFYSINFDAATERLLVPLLSGAQVVLRAQGQWDAEEICQLIRQHRISILGFTPSYGSQLAQHLATQQQTLPVRMCITGGEALTGEHLQRIRAAFQPNLFFNAYGPTETVVMPLASLAPQQLAEGVASVPIGSIVGARVAYILDADLALVPQGATGELYVGGAGLAQGYHRRPGMSAERFVADPFATDGGRLYRTGDLVRQCADGQLEYIGRVDHQVKIRGFRIELGEIETRLLDHPAVREAVVLAIDTPAGKQLAGYLVSEVAEHNEVQQANLREALKQQLKTQLPDYMVPTHLILLGSMPLTANGKLDRRALPMPDPELNRQQYVAPSNELEQTLAGVWGEVLNVQQVGLNDNFFELGGDSILSIQVVSRARQLGIHFTPRDLFQHQTVQTLARVASHTQRVSAEQGQLSGEAPLTPIQHWFFDSRIPQPQHWNQALLLEPLGTLDASLLEQALLAVLEQHDALRLRFNRSGGQWRAEYLPLSDAPLLWQVRVPSMDTCEALFADAQRSLDLEHGPLLRAVLVDGPEGEQRVLLAIHHLVVDGVSWRVLLEDLQNAYRQLQAGQALNLPAKTSALRDWSSRLQAYAGSESLREELSWWQQQLAGPAAQLPGLNAAGSQQHQQARSHSVTLDAERTRQLLQQAPAAYRTQVNDLLLTALARVLCRWSGQPSALVQLEGHGREALFDEIDLTRTVGWFTSAYPLRLTPLQVEEAAGQGASIKAIKEQLRAVPHKGLGYGVLRYLADASCREALAALPLAPVTFNYLGQFDQSFGADALLRPLDESVGPAHAPEAPLPNELSIDSQVYGGELVLRWTYSGERFDAELIGELASAYLGELQSLIAHCLKDDAGGLTPSDFPLARLTQAQLDGLPVPAAQIEDVYPLTPMQEGMLLHTLLEPGTGLYYMQDRYRINSELDPERFAQAWQAVVARHEALRASFCWNVGEDMLQVIHKPGRTPIEFLDWSAVPEAEQEAKLQALHKQEREAGFDLLNQAPFHLRLIRVGAARYWFMMSNHHILIDAWCRSLLMNDFFEIYTALGEGREAQLAVPPRYRDYIGWLQHQSLSQARQWWRQNLEGFERTTPIPSDRPFLREHAGDSGGMTVGDCYTRLDARDGAQLRELAQQHQLTINTFAQAAWALVLRRMSGDRDVLFGVTVAGRPVDMPQMQRTVGLFINSIALRVKLPEEGQRCSVRQWLSGLLDSNMQLREYEYLPLVAIQETSELPKGQPLFDSLFVFENAPVEVSVLDRAQSLNASSDSGRTHTNFPITAVCYPGDDLGLHLSYDQRYFEQATIERMLGEFKRLLLALMQGFHGDMAELPLLGEEEQDFLLAGCNQSEHEYPLERSYVELFEAQVAAHPQRVAASCLDQRYSYAELNQCSNRLGHALIANGVGFDQPVALLAERGLELLGMIIGSFKAGAGYLPLDPGLPSQRLGRIIELSRTPILVCSAACREQAQALLDEFACAGRPRLLVWEELQAAGHAESNPGRYSAPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLQLSEADVIAQTASQSFDISVWQFLAAPLFGARVDIVPNTIAHDPQGLLAHVEEQGITVLESVPSLIQGMLAQDVIVLDGLRWMLPTGEAMPPELAHQWLLRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGAYLPIGTPTDNNRLYLMDEALELVPLGAVGELCVAGTGIGRGYVSDPLRTALAFVPHPFGAAGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQPELRDAAVGVQEGVNGKHLVGYLVASDTNLSPSECLERIKPRLRAELPEYMVPLHWLWLARLPLNANGKLDRKALPALEIGQLQSQDYQAPGNELEQTLADIWAEVLKVERVGVRDNFFELGGHSLLATQIASRVQKTLQRNVPLRAMFECSTVQELAAYIDGLGANEISEEKVDRLSDLMAELEGL
>NZ_AP014522.1|WP_011062465.1|4802901_4803450_+|RNA-polymerase-factor-sigma-70
MTEQVSTSRCDSPLLQAFVDNRLILVKIAARITGCRSRAEDVVQDAFFRLQSAPQITSSFKAQLSYLFQIVRNLAIDHYRKQALEQKYSGTEEEGLNVVIHGASPETSHMNFSTLENIAEALTELPSRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVSGNRPDTFARR
>NZ_AP014522.1|WP_041119335.1|4803483_4803843_-|hypothetical-protein
MSPVDPLNVAALPTSQLTGIDEVITRQRLFKSLRGRGQAPVPVDAQAAEAARQDRLAFWLSAQVHALYLDPPGAQRPAPGAHAPPCAAHDRCRFCQQEFDLLHKRAALLVLGRSGLLEV
>NZ_AP014522.1|WP_019095084.1|4803932_4804727_-|transporter-substrate-binding-domain-containing-protein
MSLPLRSALRMLLLALATLWVCPASSAQLVRVAAAHFPPYTVRPETGADTGLLPQLVEALNQSQSDYQFVLVPTSIPRRFRDFEQGRVDLAIFENPAWGWQNIAHTSVDMGLEDAEIFVAQRQGGRQQDYFANLKGKRLALFSGYHYAFAQFNADPKFLADTYNATLTYSHDSNLLMVLRGRADIALVTRSYLSDFLARNAESTEQLLVSERIDQVYHHYALIRPKAPITAEDFSGLLQKLRDNGQMHKIFDPYRIVVMSVPHA
>NZ_AP014522.1|WP_015636493.1|4804823_4805447_-|TetR-family-transcriptional-regulator
MDEQKALQVVRELIASGQVTDPESARGKLLQTAAHLFRNKGYERTTVRDLASAVGIQSGSIFHHFKSKDDILRAVMQETIHYNTALMRAELAEAGSVRERVLALIRCELQSIMGGSGEAMAVLVYEWRSLSPEGQAAVLALRDIYEQIWLQVLGEAKEAGFIKGDVFITRRFLTGALSWTTTWFRAEGSMTLEQLAQEALLLVLKDH
>NZ_AP014522.1|WP_015636494.1|4805633_4807424_+|DUF1446-domain-containing-protein
MTKTVRIGCASAFWGDTSSAAAQLVQGGRLDYLVFDYLAEITLSIMAGARMKDPTAGYATDFVEVLKPLLGSIREQGIRVISNAGGVNPQACASALQAACEQAGVALKIAVLLGDDLQPQFKQLSDAAIVEMFSGAPLPPMCVSTNAYLGAPGIVEALRLGADIVITGRGVDSAVVSAALVHEFNWSWQDYDRLAQAALAGHIIECGAQCTGGNFTDWRQVPDYEHIGFPIVEVGADGQFVVGKAPGTGGLVSPLTVGEQLLYEIGNPRAYLLPDVVCDFSQVELRQQGPERVHVQGARGLPPSHQYKVSATYPDGFRCTASCLMAGIDAVAKAHRVSQAIIDKTSEMFAQRGWGPYSEVNIELLGSEATYGPHGQRQDSREVVIKLAVRHPNKAALVLFSREIAQAATGMAPGLTGIVGGRPTVYPVIRLFSFLLDKDACRLEIDLAGQRHPCALPHTDRLDPAALPAPHSLPAPRGRADASVALVKLAVARSGDKGNHSNIGVMARHPDYLPWIAEALTPEVLVDWMGHVLDPVHGRVQRWYLPGTHSLNFLLENALGGGGVASLRIDPQGKAFAQQLLEIQIPVPQSIADAVN
>NZ_AP014522.1|WP_019095082.1|4807434_4808304_+|SDR-family-oxidoreductase
MVYDSIFKAQLFAGQTIIVTGGGSGIGRCTAHELAALGAQVLLVGRKAEKLQKVAGEIAEDGGKADWQACDIRDEEAVKALVARLMERFGPIHGLVNNAGGQYPAPLASINQKGFETVLRTNLVGGFLMAREVFNQSMSRHGGSIVNMLADMWGGMPGMGHSGAARSGMDNFTKTAAYEWGHAGVRVNAVAPGWIASSGMDTYEGAFKAVIPTLREHVPLKRIGSESEVSAAIVFLLSPGAAFISGSTLRIDGAASLGSRAWPLGKARNSESYNGFHRAYLPDVLKGEE
>NZ_AP014522.1|WP_041119337.1|4808307_4809924_+|acyl-CoA-carboxylase-subunit-beta
MPVIQSQLDPHGPQFAQNRAAMLAGLQQLQELQQNLLAKAAEAKAKFDRRGQLLPRERLNLLLDPGAPFLELASLAGYKLHDDKDGSQAGGGLIAGIGYVCGVRMLVVANNCAIKGGTISPSGLKKSLRLQQIAMENKLPVVTLAQSGGANLNYAAEIFVEGARSFANQARMSAMGLPQITVVHGSATAGGAYQPGLSDYVVVVRGEAKLFLAGPPLLKAATGEVATDEELGGAEMHAQVAGTAEYLAENDADGIRIVREIVSLLPWNARLPVQPARTWNEPLYPIDELLGLIPDDPKKPYDAREIIARLADGSQFLEFKGEFDAQTLCGHLQIQGRPCGFIGNNGPITPQGASKAAQFIQLCDQSQTPLLFFHNTTGFMVGTESEQQGVIKHGAKMIQAVANARVPKLTIVVGGSYGAGNYAMCGRGLDPRFIFAWPNSRTAVMGGAQAGKVLRIVTEAKHAKNGQEADPKMLDMLEQVTAQKLDSQSTALYGSANLWDDGLIDPRDTRTLLGYLLDICHEAQVRELAPNSFGVARL

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Crispr_ID: NZ_AP014522_4

CRISPR_ID

CRISPR_location

CRISPR_type

Repeat_type

Spacer_info

Cas_protein_info

CRISPR-Cas_info

NZ_AP014522_4

4785073-4785214

Orphan

Consensus_repeat	Method
GCGCCTGGCTTGCGGGCCCCTTCGCTGGCAAGCCAGCTCCTAC	CRISPRCasFinder

1 spacers

The CRISPR arrays of NZ_AP014522_4

>merge|NZ_AP014522|4|4785073-4785214|CRISPRCasFinder
GCGCCTGGCTTGCGGGCCCCTTCGCTGGCAAGCCAGCTCCTACAACGCGTATCCCCAACCGTAGGAGCCGGCTTGCCGGCGAAAGCGTCCTTGCGATGAGCGCCTGACTTGCGGGCCCCTTCGCTGGCAAGCCAGCTCCTAC

>NZ_AP014522|4|3|4785073-4785214|CRISPRCasFinder
GCGCCTGGCTTGCGGGCCCCTTCGCTGGCAAGCCAGCTCCTAC	AACGCGTATCCCCAACCGTAGGAGCCGGCTTGCCGGCGAAAGCGTCCTTGCGATGA
GCGCCTGACTTGCGGGCCCCTTCGCTGGCAAGCCAGCTCCTAC

Protein	Signature genes	Signature genes Name	Protein_function
NZ_AP014522.1\|WP_041119325.1\|4777857_4779270_-\|aspartate-aminotransferase-family-protein	unknown	unknown	gnl\|CDD\|235892
NZ_AP014522.1\|WP_011062459.1\|4784253_4785021_+\|thiol:disulfide-interchange-protein-DsbG	unknown	unknown	gnl\|CDD\|183262
NZ_AP014522.1\|WP_041119331.1\|4786152_4786509_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_011062453.1\|4777550_4777775_-\|MbtH-family-protein	unknown	unknown	gnl\|CDD\|225790
NZ_AP014522.1\|WP_041119334.1\|4789511_4802528_-\|non-ribosomal-peptide-synthetase	unknown	unknown	gnl\|CDD\|235564
NZ_AP014522.1\|WP_019095084.1\|4803932_4804727_-\|transporter-substrate-binding-domain-containing-protein	unknown	unknown	gnl\|CDD\|214497
NZ_AP014522.1\|WP_011062465.1\|4802901_4803450_+\|RNA-polymerase-factor-sigma-70	unknown	unknown	gnl\|CDD\|180803
NZ_AP014522.1\|WP_041119333.1\|4788246_4789284_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_041119330.1\|4785231_4786044_-\|alpha/beta-fold-hydrolase	unknown	unknown	gnl\|CDD\|131480
NZ_AP014522.1\|WP_041119326.1\|4779505_4780831_-\|two-component-sensor-histidine-kinase	unknown	unknown	gnl\|CDD\|182388
NZ_AP014522.1\|WP_011062451.1\|4775104_4776088_+\|zinc-ABC-transporter-substrate-binding-protein	unknown	unknown	gnl\|CDD\|223874
NZ_AP014522.1\|WP_052470423.1\|4787048_4788098_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_041119335.1\|4803483_4803843_-\|hypothetical-protein	unknown	unknown	unknown
NZ_AP014522.1\|WP_015636482.1\|4774204_4775104_+\|metal-ABC-transporter-permease	unknown	unknown	gnl\|CDD\|224033
NZ_AP014522.1\|WP_041119327.1\|4780831_4781509_-\|response-regulator	unknown	unknown	gnl\|CDD\|182612
NZ_AP014522.1\|WP_019092942.1\|4776299_4777127_+\|class-I-SAM-dependent-methyltransferase	unknown	unknown	gnl\|CDD\|379312
NZ_AP014522.1\|WP_015636493.1\|4804823_4805447_-\|TetR-family-transcriptional-regulator	unknown	unknown	gnl\|CDD\|380061
NZ_AP014522.1\|WP_041119328.1\|4781663_4783415_+\|protein-disulfide-reductase-DsbD	unknown	unknown	gnl\|CDD\|234717
NZ_AP014522.1\|WP_041119329.1\|4783414_4784278_+\|TlpA-family-protein-disulfide-reductase	unknown	unknown	gnl\|CDD\|239264
NZ_AP014522.1\|WP_015636494.1\|4805633_4807424_+\|DUF1446-domain-containing-protein	unknown	unknown	gnl\|CDD\|377804

Protein	Function_ID	Function_description	E-value
NZ_AP014522.1\|WP_041119325.1\|4777857_4779270_-\|aspartate-aminotransferase-family-protein	gnl\|CDD\|235892	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional.	0
NZ_AP014522.1\|WP_011062459.1\|4784253_4785021_+\|thiol:disulfide-interchange-protein-DsbG	gnl\|CDD\|183262	PRK11657, dsbG, disulfide isomerase/thiol-disulfide oxidase; Provisional.	1.18023e-149
NZ_AP014522.1\|WP_015636494.1\|4805633_4807424_+\|DUF1446-domain-containing-protein	gnl\|CDD\|377804	pfam07287, AtuA, Acyclic terpene utilisation family protein AtuA. This family consists of several bacterial and plant proteins of around 400 residues in length. One member of this family has been characterized in Pseudomonas citronellolis as AtuA, a member of a gene cluster that is essential for the acyclic terpene utilisation (Atu) pathway.	2.21043e-172
NZ_AP014522.1\|WP_011062453.1\|4777550_4777775_-\|MbtH-family-protein	gnl\|CDD\|225790	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown].	2.42909e-33
NZ_AP014522.1\|WP_041119334.1\|4789511_4802528_-\|non-ribosomal-peptide-synthetase	gnl\|CDD\|235564	PRK05691, PRK05691, peptide synthase; Validated.	0
NZ_AP014522.1\|WP_019095084.1\|4803932_4804727_-\|transporter-substrate-binding-domain-containing-protein	gnl\|CDD\|214497	smart00062, PBPb, Bacterial periplasmic substrate-binding proteins. bacterial proteins, eukaryotic ones are in PBPe.	3.08235e-11
NZ_AP014522.1\|WP_041119330.1\|4785231_4786044_-\|alpha/beta-fold-hydrolase	gnl\|CDD\|131480	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other].	8.90519e-42
NZ_AP014522.1\|WP_041119326.1\|4779505_4780831_-\|two-component-sensor-histidine-kinase	gnl\|CDD\|182388	PRK10337, PRK10337, sensor protein QseC; Provisional.	2.30107e-54
NZ_AP014522.1\|WP_011062451.1\|4775104_4776088_+\|zinc-ABC-transporter-substrate-binding-protein	gnl\|CDD\|223874	COG0803, LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism].	2.21168e-15
NZ_AP014522.1\|WP_011062465.1\|4802901_4803450_+\|RNA-polymerase-factor-sigma-70	gnl\|CDD\|180803	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated.	6.69022e-107
NZ_AP014522.1\|WP_015636482.1\|4774204_4775104_+\|metal-ABC-transporter-permease	gnl\|CDD\|224033	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism].	3.70277e-51
NZ_AP014522.1\|WP_041119327.1\|4780831_4781509_-\|response-regulator	gnl\|CDD\|182612	PRK10643, PRK10643, two-component system response regulator PmrA.	2.31786e-77
NZ_AP014522.1\|WP_019092942.1\|4776299_4777127_+\|class-I-SAM-dependent-methyltransferase	gnl\|CDD\|379312	pfam13649, Methyltransf_25, Methyltransferase domain. This family appears to be a methyltransferase domain.	6.36752e-11
NZ_AP014522.1\|WP_015636493.1\|4804823_4805447_-\|TetR-family-transcriptional-regulator	gnl\|CDD\|380061	pfam17932, TetR_C_24, Tetracyclin repressor-like, C-terminal domain. TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain. This entry represents the C-terminal domain present in family members such as HTH-type transcriptional repressor KstR2 as well as fatty acid metabolism regulator proteins. In Mycobacterium smegmatis, KstR2 is involved in involved in cholesterol catabolism, while YsiA in Bacillus subtilis is involved in fatty acid degradation.	7.11327e-22
NZ_AP014522.1\|WP_041119328.1\|4781663_4783415_+\|protein-disulfide-reductase-DsbD	gnl\|CDD\|234717	PRK00293, dipZ, thiol:disulfide interchange protein precursor; Provisional.	0
NZ_AP014522.1\|WP_041119329.1\|4783414_4784278_+\|TlpA-family-protein-disulfide-reductase	gnl\|CDD\|239264	cd02966, TlpA_like_family, TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.	4.27501e-33

>NZ_AP014522.1|WP_011062459.1|4784253_4785021_+|thiol:disulfide-interchange-protein-DsbG
MPFIRHLLSLSLGAALLNAPLLQAEELPAPIRKIEEKGAKIIGSFDAPDGLKGYAAQYQNRGMTLYLTPDGKHVLLGNLYDADGKDLSAEPLQKLVYAPMAKEVWGNLEKSNWIADGKADAPRIVYLFSDPNCPYCNMFWEQARPWVKAGKVQLRHIMVGIIREDSPGKSAALLAAKDPQQALQDHEKAGKGSALKPLASIPAAVQAKLDANMKLMEELELSATPAIFYLDDKGELQQQQGAPAPGKLTQILGPK
>NZ_AP014522.1|WP_041119329.1|4783414_4784278_+|TlpA-family-protein-disulfide-reductase
MLTFTIGTFAIALNHLLLISALALATLVGWRVAKRGGDNPESVLFSLFLLGMLAARISFVIAYWKHYRHDLWMIIDLRDGGFLAWPGVILMLLAALAWGWKRPALRRPLGAGVASGLAFWLLATLALTLYDQGTRLPEVALRNAAGETVQLTDYQGGPLVINLWATWCPPCRREMPVLERAQQQRPDLTFLFVNQAESMQSVSTFLATQDLNLNNVLFDGSGRLGKAVGSMALPTTLFYSADGRLLGSHLGELSEASLARALENFDGAHPTSVAPSRKLPCPSSATC
>NZ_AP014522.1|WP_041119328.1|4781663_4783415_+|protein-disulfide-reductase-DsbD
MRRLFILLFMLFTTLAQAGNNPFEVKPDFLPVGKAFVFTSERLPSGETQLFWQIADGYYLYQKRLKFDGLPPEQQPTLPAGEDHSDEFFGQQTVYRQGLEVKLPAAASGKIKLGWQGCADAGLCYPPQTLEVDLGGAPTVAAANSATTSNGSAQDQLLANELQQKSWGLGLLAFFGFGLLLAFAPCSLPMLPILAGMVVGSGASPRRGLALASSYVLCMALVYAGMGVIAALLGSNLQAWLQQPWVLGSFAGLFVLLSLPMFGFFELQMPAVLRDRLEGASRQRQGGSLIGCGALGALSALLVGPCMTAPLAGGLLYIAQTGNALFGGLALFALGLGIGLPLLLLVTVGNRFLPKPGPWMNLLKGVFGFLFLGTAIYMLRPVLGASLWIGLWGALALVLAYCAWQQRAIAGRLVHAFGASSVLFGIWGSMLLVGAAGGSDELWRPLKVYSGGGVASSVTAHDAFTTVKSPAELQSALDNAQAQGQWVLLDYYADWCVSCKIMEKTVFGQPQVLDALKDVRLLRLDVTLDNADGRELLSRYKVPGPPSMLWIGPDGSERRSQRITGEVDASTFLQRWTQTREAR
>NZ_AP014522.1|WP_041119327.1|4780831_4781509_-|response-regulator
MHVLVCEDDELIASGIVAGLTAQGLTVEHVATASAARAMLGVADFDVMVLDLGLPDEDGLKLLKQQRQQGLEIPVLILTARDSVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRSVNLIEHGRLTYDPSTRETLLGGQPVDLSRREQSLLQALLHNRGRVLSSEQLKDSVYGFNDELESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPADGEENP
>NZ_AP014522.1|WP_041119326.1|4779505_4780831_-|two-component-sensor-histidine-kinase
MRSLRLRLSMTLGAAFILIWALAAAWMLSDLRNQMMFSLDQRLVASARMVAGLLEQMPTLPSHAPGNQINSAALTIPGGMACQVSSLRGQILARSHSTPEHPLEAEKLGFHDQMIDGAPWRTFTLVRGDMRITTADRQVEREALNMSVLLAASVPVGVALLGCLWLLWLGIGQSLAPLNRIRDALMRRSADSLEPLQIQPMPSELRPLLETQNQLFQRIAKTIERERRLTGDAAHELRSPLTAIKTHLQVARMTEGAARDQSLARAEEGADRMHRTLEQLLLLARVEGSLSFDDGVHCNAEQVARLAIQDAAVGARARVKLHMQGKAGEAAVEMPSTLAIAALRNLLDNALRHTPEECPVELNLETVGARVRFQVRDHGSGIPAQDLQHLTQRFWRDSQSSGCGLGLAIVQAIVQRCGCELNFDSRPDGLRVELTLPAHRA
>NZ_AP014522.1|WP_041119325.1|4777857_4779270_-|aspartate-aminotransferase-family-protein
MSAVTSLMEDSPVGLGAAPQETLYQFDESPLLARQSRQESNARSYPRRIPLALKRASGIHVEDVEGRRFIDCLAGAGTLALGHNHPVVIAAIQQVLADELPLLTLDLTTPVKDQFVQDLFGLLPEALAAEAKIQFCGPTGTDAVEAALKLVRTATGRSTVLSFQGGYHGMSQGALSLMGSLGPKRALAGLLNNGVQFLPFPYDYRCPFGLGGAEGVKVNLHYLENLLTDPEAGVALPAAVIVEAVQGEGGVIPADLEWLQGVRRITEKAGVALIVDEIQSGFGRTGKMFAFEHAGIIPDVVVMSKAIGGSLPLAVMVYRDWLDSWQPGAHAGTFRGNQMAMATGSAVMRYLKEHRVPEHAAAMGERLREHLLILQRDFPQLGDIRGRGLMLGVELVDPAGAPDAQGHPPQHARLAPLVQRECLKRGLILELGGRHGAVVRFLPPLIITAAQIDQVAQIFSKAVAAAVASL
>NZ_AP014522.1|WP_011062453.1|4777550_4777775_-|MbtH-family-protein
MTSVFDREDILFQVVVNHEEQYSIWPDYKAVPQGWRTVGKSGFKKDCLAYIEEVWTDMRPLSLRQKMDQQAVAG
>NZ_AP014522.1|WP_019092942.1|4776299_4777127_+|class-I-SAM-dependent-methyltransferase
MSDYVKLNKTNWDERAPLHAASADYAVQRFVDEAGYLSDVVQFDRPLLGNIRGLRGVHLQCHIGTDTLSLARLGAQMSGVDFSPASLAEARTLARRCNTPIDYHESDVFLAAEVLPQGNFDLVYTGIGALCWLPSIERWAQTVGALLKPGGRLFIREGHPMLWAINEDHHDSLRVELPYFETREPLVWDDENTYVETDSPLKATMTHEWNHGLGEIISALLAQGLDITGLVEHQSIPWEALPGQMVVDERGEWRLKEAPWRLPLSYTLQAVKRGG
>NZ_AP014522.1|WP_011062451.1|4775104_4776088_+|zinc-ABC-transporter-substrate-binding-protein
MHSSLPHLSLRRLTLALALGGLISTPALAERDHFEPMRVVANHGMGNTALHSATSSKSPTVLASLPVTFGLGQILLQGTDIKLERAAPANLPGSRQTAYFTGRGAPALAKLALNADAVIGLRSIWPDDPLYPNARRSNIRIVEIDAARPVDGALPGVALQPGKSDGLNAQPWLSSNNLGRMADVLAADLARLAPEAKPQIESNLAGLKQRLLKLSADSEARLAEADNLSVLSLSEHFGYLVSGLNLELLEVDARADNEWTPEALKKLQARLKDNDVALVLHHRQPSDALKAAISAGGSQLLVLETDSADPLAELEGNLQKVTQALSL
>NZ_AP014522.1|WP_015636482.1|4774204_4775104_+|metal-ABC-transporter-permease
MTYEAFRLMVQGWASAGYLPEALAYGFVVNALLAGLLIGPVLGGLGTLVVVKRFAFFSEAVGHAALTGVAIGILLGEPYTGPYGSLFGYCLLFGILLNYLRNRTGLAPDTLIGVFLSVSLALGASLLLILAGKINVHILENVLFGSVLTVNGSDLLVLLIVGALVLGLSLPLYNRIMLASFNPQLAAVRGVAVKTLDYLFVILVTLITVAAVKVIGAILVGALLVIPAAAARLLSQSLKGFFWISVSIATVSTLCGILLPIVFDLPVPSGAAIILVAGVAFALAAIARGTVPSLKGNIG
>NZ_AP014522.1|WP_041119330.1|4785231_4786044_-|alpha/beta-fold-hydrolase
MPFATLDGQPLHYLDQGQGPVVFLAGSYLWDTSMWAPQIEALSAQYRVIAVDLWGHGQSGPLPAGTASLDDVARQMLALLDHLQIERVTLVGLSVGGMWGARLALAAPQRIDGLVLMDTYLGAEPEPTRQYYFSLFQQIEDSGLIAEALLDIVVPIFFRPGIDRQSALFQDFRASLAALPAEGLRQSVIPMGRITFSRADVLDQLAHLDARNTLLLCGDQDQPRPPAETIEMAERIGCPYQLVPEAGHISSLENPEFVTRALLGFLQRNG
>NZ_AP014522.1|WP_041119331.1|4786152_4786509_-|hypothetical-protein
MKKLVPDPPTSYRDPALKAANATLRVALARQPLDPAVFQLTTQAKPVSPDSLFSVREGVSAEEALVHVALLLKCAEEVCDEITQQGSGLERGLIWSMVHSVEMARAVVEALLDGQRGA
>NZ_AP014522.1|WP_052470423.1|4787048_4788098_-|hypothetical-protein
MEQIFWRDIEDLAGHWNGLGVDVKCSANSKPNLCLLSGNNRRMQLVLGDQTLLWGTMSRCLYGVWLVRNHLQEQLPQTLVGPIDSPQVEQQARLDPAQRLKAWSRFFVEQLMQYQPDFFYPGYWLVRALRPQSQKPLRPLLSGTEAWYFKGGEDAQSHMPQWAIYGRNILDNQQPGSARWVELYEGGGAVVGLHAVDPHSGRLKWWRKKAREGSLPPILLWYVSGLNCHLILDGHYRLQAAIDENLPPEFLVLSTPRLYHYRPNPQEQQKVLGALQVQVQRNNLDTRRFNQLLISTFDDRPYHGFGSQSWAGIASEQAWIDQVSGILKERGDLSDLEEILEREAPEEYR
>NZ_AP014522.1|WP_041119333.1|4788246_4789284_-|hypothetical-protein
MAEQLYWRDIEDSLGNWSGLGVEVEPGPTNRPPLYLRTGANARIKLMHHDTPLFWATFAWDHGGVWLVRNPLAEGAECRMLAPIDSPTVQQYAALAPELRIKAWSRYFVSRLSESARHFLTPGFWLAQSLLPEPSSTANGLDHWRFTSVIDPLTHVPSWHLYGEDFLDNLQPQTLEWIDWWHGGGKLIGLHRVDPQAGRLKWWRKKAREGSLPPILLWYVGGLASYVVIDGHYRLQAAIAENLAPSFIVLSATRERDFTPSLEHQQRVMDSLRKRGDAVPRNPALSTENLNRVLIQAFDDRPQYRSATPAWAGNEPESQWCDEVRQCLNGQGLEDQMEAVIARRG
>NZ_AP014522.1|WP_041119334.1|4789511_4802528_-|non-ribosomal-peptide-synthetase
MTDAFELPSTLAQALQRRAVLAPDQVALRFLAEEQDQSVVLSYRDLDLRARTIAAALQANAEFGDRAVLLFPSGPDYVAAFFGCLYAGVIAVPAYPPESTRRHHQERLISIMADAEPRLLLTSAGLRDSLLQMDELKAAGAPQLLCVDTLQAGLAEDWQAVALQDDDIAFLQYTSGSTALPKGVQVSHGNLVANELLIRRGFGIDLNPDDVIVSWLPLYHDMGLIGGLLQPIFSGVPCVLMSPAYFLARPVRWLEAISEYGGTISGGPDFAYRLCSERVSESALERLDLSGWRVAYSGSEPIRLDTLERFAEKFSACGFSHENFLASYGLAEATLFVAGGVRGQGIPALHLDDQALAQNRAEPGQGSAMMSCGFSQPEHAVLVMDPQQLGELPDNRIGEVWAAGPSIAHGYWRNPEATAKTFVQHAGRTWLRTGDLGFIRDGELFITGRLKDLLIVRGHNLYPQDIEKTIEREVEVVRKGRVAAFAVTEQGQEGIGIAAEISRSVQKILPPEALIKAIRQAVAEACQEAPSVVVLLNPGALPKTSSGKLQRSACRTRLADGSLDYYALFPQAGSATADAADSAGDALQTLIGRIWQEQLQCASVAADDHFFLLGGNSIAATQVIARLREELGLELGLRLLFEAPTLGAFSAAVARQQQDGGVAQGSINALSRQQPLPQSLAQNRLWITWQLDPQSSAYNIPGGLRLRGELDEEALRASFQQLIQRHEALRTRFFERDGQALQQVDAAGEFNLQVIDISDLPPAEREARARQIREDEARTQFDLEKGPLYWATLVRLDDEEHQLLLTLHHIIADGWSLNLLIDEFSRLYAAAAQGHSLELAPLALQYADYGSWQRQWLAQGEGQRQLDYWKQQLADEAPVLNLATDHPRSAQVRHSAARHDLRLSASLSEAVRQTAQARQATPFMLLLAAFQTLLHRYSGQSDIRIGVPNANRPRLETQGLLGFFINTQVLRGQLDSRQSFADLLQQTRRTTLEAQAHQDLPFEQLLEAFPEAREQGLFQVMFNHQQRDLSTLRRLPGLLAEELPWHSREAKFDLQLHSEEDRNGRLSLAFDYADELFDAASIQRLAGHFISLLEHACLQPDCALGDLPLLGNAEAAQLQQWSVAPCAPAEQWLPERLHEQLRQSPERTALVWDGGQLGFAELHAQASRLAHYLRDKGVGPDVCVAIAAERSPQLLIGLLAIIKAGGAYVPLDPDYPAERLAYMLEDSGVGLLLTQTHLLGRMPEAPGVSAIAMDSLKLDSWPSHAPGLHLHGEHLAYVIYTSGSTGQPKGVGNTHRALMERLQWMQDSYQLQADDVLMQKAPISFDVSVWECFWPLITGCRLLIAAPGEHRDPHRIAQLVQEYGVTTLHFVPPLLQLFVDEPLSAECHSLRRVFSGGEALPAELRNRLLQQLPNAQLHNRYGPTETAINVTHWQCSVDDGERSPIGRPLGNVVCRVLDTDLNPLPAGVPGELCISGQGLARGYLGRPALTAERFVVDPLSEEGARLYRTGDRVRWCADGVLEYLGRLDQQVKLRGFRVEPQEIEARLLAQDGVAQAAVLVRDTLAGPQLIGYYTPNAHDEDEQQQSARLKTALAAELPEYMVPAQLLRLDAMPLSPSGKLDRRALPEPQWQVREHVEPSTELEQQIAAIWREVLGQPRIGLKDDFFALGGHSLLATQIISRTRQACDVELPLRALFEASELGAFAEQVLLIQQSGARNQQPPIARVDRSQPVPLSYSQQRMWFLWQMEPDSPAYNVGGMARLSGVFDVGRFEAALQALILRHETLRTTFPSVNGVAHQQVHADTGLRMAWKDFSALAPDARQQRLQQLADSEAHQPFDLETGPLLRACLVKAGEQEHYFVLTLHHIVTEGWAMDIFARELGALYEAFLDDRESPLEPLPVQYLDYSVWQRQWLESGERQRQLDYWTGQLGREHPLLELPSDRPRPAVQSHQGELYRFDLSDELAARVRAFNAEHGLTLFMTMTAALSLLLYRYSGQSDLRIGAPVANRIRPESEGLIGAFLNTQVLRCQLDGQMSVGQLLEQIRHTVIEGQSHQDLPFDHLVEALQPPRSTAYNPLFQVMCNVQRWEFQQSRQLAGMTVEYLVNDARATKFDLNLEVTDLDQRLGCCLTYSTDLFDEPRIARMAGHWRNLLEALLSDPQRRLCELPLLQADEQQHLLDSLSVEPGEQRLDQCIHHLFSEQALARRDAPALTFAGQTLSYSELDSRANRLAWMLRERGVGPQVRVGLALERSLEMVVGLLAILKAGGAYVPLDPEYPLDRLHYMIEDSGIGLLLSDARMFAALGELPAGVGRWCLEEDGALLADYPAGELPFISLPQHQAYLIYTSGSTGQPKGVVVSHGEIAMHCQAVIRRFGMRPDDCELHFYSINFDAATERLLVPLLSGAQVVLRAQGQWDAEEICQLIRQHRISILGFTPSYGSQLAQHLATQQQTLPVRMCITGGEALTGEHLQRIRAAFQPNLFFNAYGPTETVVMPLASLAPQQLAEGVASVPIGSIVGARVAYILDADLALVPQGATGELYVGGAGLAQGYHRRPGMSAERFVADPFATDGGRLYRTGDLVRQCADGQLEYIGRVDHQVKIRGFRIELGEIETRLLDHPAVREAVVLAIDTPAGKQLAGYLVSEVAEHNEVQQANLREALKQQLKTQLPDYMVPTHLILLGSMPLTANGKLDRRALPMPDPELNRQQYVAPSNELEQTLAGVWGEVLNVQQVGLNDNFFELGGDSILSIQVVSRARQLGIHFTPRDLFQHQTVQTLARVASHTQRVSAEQGQLSGEAPLTPIQHWFFDSRIPQPQHWNQALLLEPLGTLDASLLEQALLAVLEQHDALRLRFNRSGGQWRAEYLPLSDAPLLWQVRVPSMDTCEALFADAQRSLDLEHGPLLRAVLVDGPEGEQRVLLAIHHLVVDGVSWRVLLEDLQNAYRQLQAGQALNLPAKTSALRDWSSRLQAYAGSESLREELSWWQQQLAGPAAQLPGLNAAGSQQHQQARSHSVTLDAERTRQLLQQAPAAYRTQVNDLLLTALARVLCRWSGQPSALVQLEGHGREALFDEIDLTRTVGWFTSAYPLRLTPLQVEEAAGQGASIKAIKEQLRAVPHKGLGYGVLRYLADASCREALAALPLAPVTFNYLGQFDQSFGADALLRPLDESVGPAHAPEAPLPNELSIDSQVYGGELVLRWTYSGERFDAELIGELASAYLGELQSLIAHCLKDDAGGLTPSDFPLARLTQAQLDGLPVPAAQIEDVYPLTPMQEGMLLHTLLEPGTGLYYMQDRYRINSELDPERFAQAWQAVVARHEALRASFCWNVGEDMLQVIHKPGRTPIEFLDWSAVPEAEQEAKLQALHKQEREAGFDLLNQAPFHLRLIRVGAARYWFMMSNHHILIDAWCRSLLMNDFFEIYTALGEGREAQLAVPPRYRDYIGWLQHQSLSQARQWWRQNLEGFERTTPIPSDRPFLREHAGDSGGMTVGDCYTRLDARDGAQLRELAQQHQLTINTFAQAAWALVLRRMSGDRDVLFGVTVAGRPVDMPQMQRTVGLFINSIALRVKLPEEGQRCSVRQWLSGLLDSNMQLREYEYLPLVAIQETSELPKGQPLFDSLFVFENAPVEVSVLDRAQSLNASSDSGRTHTNFPITAVCYPGDDLGLHLSYDQRYFEQATIERMLGEFKRLLLALMQGFHGDMAELPLLGEEEQDFLLAGCNQSEHEYPLERSYVELFEAQVAAHPQRVAASCLDQRYSYAELNQCSNRLGHALIANGVGFDQPVALLAERGLELLGMIIGSFKAGAGYLPLDPGLPSQRLGRIIELSRTPILVCSAACREQAQALLDEFACAGRPRLLVWEELQAAGHAESNPGRYSAPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLQLSEADVIAQTASQSFDISVWQFLAAPLFGARVDIVPNTIAHDPQGLLAHVEEQGITVLESVPSLIQGMLAQDVIVLDGLRWMLPTGEAMPPELAHQWLLRYPQIGLVNAYGPAECSDDVAFFRVDLASTRGAYLPIGTPTDNNRLYLMDEALELVPLGAVGELCVAGTGIGRGYVSDPLRTALAFVPHPFGAAGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQPELRDAAVGVQEGVNGKHLVGYLVASDTNLSPSECLERIKPRLRAELPEYMVPLHWLWLARLPLNANGKLDRKALPALEIGQLQSQDYQAPGNELEQTLADIWAEVLKVERVGVRDNFFELGGHSLLATQIASRVQKTLQRNVPLRAMFECSTVQELAAYIDGLGANEISEEKVDRLSDLMAELEGL
>NZ_AP014522.1|WP_011062465.1|4802901_4803450_+|RNA-polymerase-factor-sigma-70
MTEQVSTSRCDSPLLQAFVDNRLILVKIAARITGCRSRAEDVVQDAFFRLQSAPQITSSFKAQLSYLFQIVRNLAIDHYRKQALEQKYSGTEEEGLNVVIHGASPETSHMNFSTLENIAEALTELPSRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVSGNRPDTFARR
>NZ_AP014522.1|WP_041119335.1|4803483_4803843_-|hypothetical-protein
MSPVDPLNVAALPTSQLTGIDEVITRQRLFKSLRGRGQAPVPVDAQAAEAARQDRLAFWLSAQVHALYLDPPGAQRPAPGAHAPPCAAHDRCRFCQQEFDLLHKRAALLVLGRSGLLEV
>NZ_AP014522.1|WP_019095084.1|4803932_4804727_-|transporter-substrate-binding-domain-containing-protein
MSLPLRSALRMLLLALATLWVCPASSAQLVRVAAAHFPPYTVRPETGADTGLLPQLVEALNQSQSDYQFVLVPTSIPRRFRDFEQGRVDLAIFENPAWGWQNIAHTSVDMGLEDAEIFVAQRQGGRQQDYFANLKGKRLALFSGYHYAFAQFNADPKFLADTYNATLTYSHDSNLLMVLRGRADIALVTRSYLSDFLARNAESTEQLLVSERIDQVYHHYALIRPKAPITAEDFSGLLQKLRDNGQMHKIFDPYRIVVMSVPHA
>NZ_AP014522.1|WP_015636493.1|4804823_4805447_-|TetR-family-transcriptional-regulator
MDEQKALQVVRELIASGQVTDPESARGKLLQTAAHLFRNKGYERTTVRDLASAVGIQSGSIFHHFKSKDDILRAVMQETIHYNTALMRAELAEAGSVRERVLALIRCELQSIMGGSGEAMAVLVYEWRSLSPEGQAAVLALRDIYEQIWLQVLGEAKEAGFIKGDVFITRRFLTGALSWTTTWFRAEGSMTLEQLAQEALLLVLKDH
>NZ_AP014522.1|WP_015636494.1|4805633_4807424_+|DUF1446-domain-containing-protein
MTKTVRIGCASAFWGDTSSAAAQLVQGGRLDYLVFDYLAEITLSIMAGARMKDPTAGYATDFVEVLKPLLGSIREQGIRVISNAGGVNPQACASALQAACEQAGVALKIAVLLGDDLQPQFKQLSDAAIVEMFSGAPLPPMCVSTNAYLGAPGIVEALRLGADIVITGRGVDSAVVSAALVHEFNWSWQDYDRLAQAALAGHIIECGAQCTGGNFTDWRQVPDYEHIGFPIVEVGADGQFVVGKAPGTGGLVSPLTVGEQLLYEIGNPRAYLLPDVVCDFSQVELRQQGPERVHVQGARGLPPSHQYKVSATYPDGFRCTASCLMAGIDAVAKAHRVSQAIIDKTSEMFAQRGWGPYSEVNIELLGSEATYGPHGQRQDSREVVIKLAVRHPNKAALVLFSREIAQAATGMAPGLTGIVGGRPTVYPVIRLFSFLLDKDACRLEIDLAGQRHPCALPHTDRLDPAALPAPHSLPAPRGRADASVALVKLAVARSGDKGNHSNIGVMARHPDYLPWIAEALTPEVLVDWMGHVLDPVHGRVQRWYLPGTHSLNFLLENALGGGGVASLRIDPQGKAFAQQLLEIQIPVPQSIADAVN

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Click the colored protein region to show detailed information

Self-targeting detection

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_ID	Protospacer_location	Mismatch	Identity

MGE targeting detection<

CRISPR_ID	Spacer_Info	Spacer_region	Spacer_length	Hit_phage_ID	Hit_phage_def	Protospacer_location	Mismatch	Identity

Prophage detection

Region

Region Position

Protein_number

Hit_taxonomy

Key_proteins

Att_site

Prophage annotation

DBSCAN-SWA_1

1352097 : 1456657

104

Pseudomonas_phage(36.54%)

tail,protease,holin,plate,tRNA

The bacterium proteins that are colored denote the protein is present at specific phage-related keywords (such as 'capsid', 'head', 'integrase', 'plate', 'tail', 'fiber', 'coat', 'transposase', 'portal', 'terminase', 'protease' or 'lysin' and 'tRNA')

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_073698950.1\|1352097_1352919_+\|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	S4VW33	Pandoravirus	1.7e-08	33.0
WP_041116200.1\|1353001_1353412_-	SufE family protein	NA	NA	NA	NA
WP_041116202.1\|1353408_1354614_-	aminotransferase class V-fold PLP-dependent enzyme	Q2XUY6	environmental_halophage	2.1e-71	36.1
WP_011059518.1\|1354690_1355725_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA
WP_041116204.1\|1355758_1356121_-	ArsC family reductase	NA	NA	NA	NA
WP_041116206.1\|1356358_1358005_+	Na+/H+ antiporter	NA	NA	NA	NA
WP_041116208.1\|1358060_1359260_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA
WP_015634331.1\|1359298_1362001_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA
WP_011059523.1\|1362049_1362832_-	type I methionyl aminopeptidase	NA	NA	NA	NA
WP_011059524.1\|1363239_1363977_+	30S ribosomal protein S2	NA	NA	NA	NA
WP_011059525.1\|1364180_1365047_+	elongation factor Ts	NA	NA	NA	NA
WP_011059526.1\|1365256_1366000_+	UMP kinase	NA	NA	NA	NA
WP_011059527.1\|1365996_1366554_+	ribosome recycling factor	NA	NA	NA	NA
WP_011059528.1\|1366569_1367325_+	di-trans,poly-cis-decaprenylcistransferase	R9W0U9	Flavobacterium_phage	5.0e-18	38.1
WP_041116212.1\|1367324_1368131_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA
WP_041116214.1\|1368127_1369318_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA
WP_011059531.1\|1369367_1370720_+\|protease	sigma E protease regulator RseP	NA	NA	NA	NA
WP_011059532.1\|1370794_1373185_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA
WP_011059533.1\|1373230_1373734_+	OmpH family outer membrane protein	NA	NA	NA	NA
WP_041116216.1\|1373737_1374793_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA
WP_007924058.1\|1374902_1375343_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA
WP_011059535.1\|1375339_1376116_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA
WP_169892834.1\|1376115_1377243_+	lipid-A-disaccharide synthase	NA	NA	NA	NA
WP_080774169.1\|1377260_1377893_+	ribonuclease HII	V5LS49	Emiliania_huxleyi_virus	4.4e-28	40.0
WP_041116221.1\|1377962_1381484_+	DNA polymerase III subunit alpha	A0A2L1IZ23	Streptomyces_phage	7.3e-197	38.0
WP_015634338.1\|1381623_1382571_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA
WP_041116223.1\|1382704_1384021_+\|tRNA	tRNA lysidine(34) synthetase TilS	NA	NA	NA	NA
WP_011059541.1\|1384295_1385927_+	CTP synthase	A0A1J0FA14	Only_Syngen_Nebraska_virus	2.4e-158	53.6
WP_011059542.1\|1385932_1386778_+	3-deoxy-8-phosphooctulonate synthase	E3T537	Cafeteria_roenbergensis_virus	7.9e-49	42.4
WP_011059543.1\|1386933_1388223_+	phosphopyruvate hydratase	A0A1X9I5Z8	Streptococcus_phage	1.5e-136	59.4
WP_011059544.1\|1388395_1388674_+	cell division protein FtsB	NA	NA	NA	NA
WP_019093200.1\|1388670_1389378_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA
WP_011059546.1\|1389494_1390394_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011059547.1\|1390498_1391611_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	E3SJ82	Synechococcus_phage	1.9e-29	27.4
WP_041116226.1\|1391698_1392544_+	S-formylglutathione hydrolase	NA	NA	NA	NA
WP_011059549.1\|1392596_1393070_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA
WP_041116228.1\|1393066_1394125_+\|tRNA	tRNA pseudouridine(13) synthase TruD	NA	NA	NA	NA
WP_011059551.1\|1394112_1394862_+	5'/3'-nucleotidase SurE	A0A1B1ITZ2	uncultured_Mediterranean_phage	2.6e-67	52.6
WP_169892832.1\|1394903_1395539_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	A0A1B1IU40	uncultured_Mediterranean_phage	1.0e-40	48.8
WP_041116230.1\|1395751_1396612_+	peptidoglycan DD-metalloendopeptidase family protein	A0A0S2SXL7	Bacillus_phage	6.5e-06	33.3
WP_011059554.1\|1396718_1397726_+	RNA polymerase sigma factor RpoS	G8CLC7	Synechococcus_phage	6.6e-34	35.8
WP_011059555.1\|1398238_1398562_-	ferredoxin family protein	NA	NA	NA	NA
WP_011059556.1\|1398705_1401285_-	DNA mismatch repair protein MutS	A0A1V0SDQ0	Indivirus	2.1e-28	24.2
WP_019093195.1\|1401471_1402218_+	helix-turn-helix transcriptional regulator	B5TK58	Pseudomonas_phage	7.8e-125	90.3
WP_011059558.1\|1402735_1403086_+\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	3.2e-52	89.6
WP_041116232.1\|1403174_1403696_+	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	2.1e-20	37.9
WP_041116233.1\|1403692_1404283_+\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	3.5e-51	72.7
WP_041116235.1\|1404375_1404579_+	hypothetical protein	NA	NA	NA	NA
WP_015634349.1\|1404583_1404910_+	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	5.1e-36	67.6
WP_019093191.1\|1404906_1405788_+\|plate	baseplate J/gp47 family protein	A0A2H4JFK9	uncultured_Caudovirales_phage	2.0e-95	63.0
WP_019093190.1\|1405789_1406395_+\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	9.0e-71	65.8
WP_041116237.1\|1406391_1407618_+\|tail	phage tail protein	A0A2H4JF09	uncultured_Caudovirales_phage	1.0e-76	71.7
WP_125062640.1\|1407617_1408388_+	hypothetical protein	NA	NA	NA	NA
WP_161466268.1\|1408534_1408837_+	hypothetical protein	B5TK82	Pseudomonas_phage	4.4e-10	44.3
WP_015634354.1\|1408938_1410105_+\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	3.0e-179	80.7
WP_015634355.1\|1410117_1410627_+\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	1.1e-66	73.1
WP_015634356.1\|1410636_1410942_+\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	1.2e-18	51.5
WP_041116241.1\|1411083_1413633_+\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	1.4e-80	36.1
WP_041116242.1\|1413642_1414488_+\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	6.9e-77	55.0
WP_015634359.1\|1414462_1414669_+\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	3.4e-22	71.6
WP_041116243.1\|1414730_1415774_+	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	3.7e-149	75.5
WP_041116245.1\|1415823_1416960_+	glycosyl hydrolase	A0A2L0HM30	Microbacterium_phage	3.1e-08	28.0
WP_041116247.1\|1417117_1417699_+	hypothetical protein	B5TK65	Pseudomonas_phage	6.4e-66	63.5
WP_011059562.1\|1417695_1417878_+	DUF2635 domain-containing protein	B5TK66	Pseudomonas_phage	3.9e-22	86.7
WP_041116249.1\|1417877_1419374_+\|tail	phage tail sheath subtilisin-like domain-containing protein	B5TK67	Pseudomonas_phage	4.6e-249	87.8
WP_011059564.1\|1419440_1419788_+\|tail	phage tail tube protein	B5TK68	Pseudomonas_phage	1.7e-53	86.1
WP_041116251.1\|1419784_1420081_+\|tail	phage tail assembly protein	B5TK69	Pseudomonas_phage	1.2e-41	90.8
WP_041116253.1\|1420211_1421810_+	hypothetical protein	B5TK70	Pseudomonas_phage	5.3e-62	61.7
WP_041116255.1\|1421799_1423044_+	DNA circularization N-terminal domain-containing protein	B5TK71	Pseudomonas_phage	8.9e-174	74.0
WP_041116257.1\|1423047_1424088_+\|plate	baseplate protein	B5TK72	Pseudomonas_phage	1.3e-149	78.3
WP_011059569.1\|1424197_1424704_+\|plate	phage baseplate assembly protein	B5TK73	Pseudomonas_phage	2.1e-73	85.7
WP_041116258.1\|1424706_1425105_+	phage GP46 family protein	B5TK74	Pseudomonas_phage	4.7e-60	83.3
WP_019093485.1\|1425094_1426135_+\|plate	baseplate J/gp47 family protein	B5TK75	Pseudomonas_phage	1.5e-158	82.9
WP_041116260.1\|1426122_1426722_+	DUF2313 domain-containing protein	B5TK76	Pseudomonas_phage	3.4e-94	81.9
WP_015634370.1\|1426737_1427835_+\|tail	phage tail protein	A0A1W6JT73	Escherichia_phage	2.4e-29	40.9
WP_041116261.1\|1427831_1428209_+	hypothetical protein	B5TK82	Pseudomonas_phage	5.9e-12	50.0
WP_015634371.1\|1428259_1428823_+	glycoside hydrolase family 19 protein	B5TK83	Pseudomonas_phage	5.6e-83	79.5
WP_041116263.1\|1428931_1429447_+	hypothetical protein	A0A1S5NQ26	Burkholderia_phage	4.1e-24	49.4
WP_041116265.1\|1429716_1430358_+	hypothetical protein	B5TK60	Pseudomonas_phage	5.1e-64	55.6
WP_011059578.1\|1430527_1431028_+	CinA family protein	B5TK85	Pseudomonas_phage	5.2e-72	84.3
WP_011059579.1\|1431111_1432164_+	recombinase RecA	A0A0S2MVG1	Bacillus_phage	2.0e-113	61.0
WP_041116266.1\|1432172_1432640_+	recombination regulator RecX	NA	NA	NA	NA
WP_041116268.1\|1432680_1433799_-	LOG family protein	NA	NA	NA	NA
WP_041116270.1\|1434242_1434437_+	hypothetical protein	NA	NA	NA	NA
WP_011059583.1\|1434437_1434863_-	quorum-sensing-regulated virulence factor family protein	NA	NA	NA	NA
WP_011059584.1\|1435054_1435765_+	DTW domain-containing protein	NA	NA	NA	NA
WP_041116271.1\|1435748_1436654_-	DMT family transporter	NA	NA	NA	NA
WP_011059586.1\|1436892_1437543_+	response regulator transcription factor	NA	NA	NA	NA
WP_011059587.1\|1437618_1437981_+	diacylglycerol kinase	NA	NA	NA	NA
WP_011059588.1\|1437982_1438909_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_003198368.1\|1439028_1439808_+	ferredoxin--NADP reductase	NA	NA	NA	NA
WP_041116273.1\|1439927_1440623_-\|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	NA	NA	NA	NA
WP_041116275.1\|1440740_1441511_-	SDR family oxidoreductase	NA	NA	NA	NA
WP_041116277.1\|1441638_1442100_-	DUF1456 family protein	Q9EYF4	Enterobacteria_phage	1.9e-36	50.0
WP_041116279.1\|1442166_1442877_-	RNA-binding protein S4	NA	NA	NA	NA
WP_041116280.1\|1442959_1443433_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011059594.1\|1443529_1444867_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA
WP_041116282.1\|1445188_1447090_+	potassium transporter Kup	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	1.9e-74	34.0
WP_041116283.1\|1447256_1447532_-	DUF3077 domain-containing protein	NA	NA	NA	NA
WP_041116285.1\|1447963_1449262_-	virulence factor family protein	NA	NA	NA	NA
WP_041116286.1\|1449261_1451910_-	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	NA	NA	NA	NA
WP_041116288.1\|1452838_1453906_+	DNA polymerase IV	NA	NA	NA	NA
WP_011059599.1\|1453970_1454924_-	hypothetical protein	NA	NA	NA	NA
WP_015634388.1\|1454941_1456657_-\|tRNA	proline--tRNA ligase	NA	NA	NA	NA

DBSCAN-SWA_2

3815328 : 3880729

Pseudomonas_phage(47.62%)

tail,capsid,terminase,integrase

attL 3813422:3813437|attR 3819029:3819044

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
3813422:3813437	attL	NA	NA	NA	NA
WP_041118539.1\|3815328_3816267_-\|integrase	site-specific integrase	NA	NA	NA	NA
WP_011061679.1\|3816447_3817455_+	DNA-binding protein	NA	NA	NA	NA
WP_041118540.1\|3817455_3818814_-	glutathione-disulfide reductase	A0A2K5B2C5	Erysipelothrix_phage	1.5e-49	28.5
WP_011061681.1\|3818944_3819784_-	UTP--glucose-1-phosphate uridylyltransferase GalU	A0A127AW70	Bacillus_phage	7.3e-63	46.1
3819029:3819044	attR	NA	NA	NA	NA
WP_011061682.1\|3820248_3820530_+	hypothetical protein	NA	NA	NA	NA
WP_011061683.1\|3820544_3820775_-	hypothetical protein	NA	NA	NA	NA
WP_041118541.1\|3820844_3821765_-	c-type cytochrome	NA	NA	NA	NA
WP_041118542.1\|3821761_3822412_-	cytochrome c4	NA	NA	NA	NA
WP_041118543.1\|3822710_3823061_-	hypothetical protein	NA	NA	NA	NA
WP_011061687.1\|3823272_3823575_+	DUF1883 domain-containing protein	NA	NA	NA	NA
WP_015635890.1\|3823604_3823775_+	hypothetical protein	NA	NA	NA	NA
WP_041118544.1\|3823878_3824595_+	2OG-Fe(II) oxygenase	NA	NA	NA	NA
WP_041118545.1\|3824584_3825265_+	DNA oxidative demethylase AlkB	NA	NA	NA	NA
WP_041118546.1\|3825350_3826436_+	bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada	A0A0G2Y3R2	Acanthamoeba_polyphaga_mimivirus	2.3e-16	51.1
WP_041118547.1\|3826387_3826876_-	GyrI-like domain-containing protein	NA	NA	NA	NA
WP_041118548.1\|3827090_3828155_+	nitronate monooxygenase	NA	NA	NA	NA
WP_171820754.1\|3828373_3829096_+	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_015635894.1\|3829096_3829777_+	molybdate ABC transporter permease subunit	NA	NA	NA	NA
WP_041118550.1\|3829781_3830864_+	molybdenum ABC transporter ATP-binding protein	G9BWD6	Planktothrix_phage	8.1e-22	33.5
WP_041118551.1\|3830944_3831982_+	DNA topoisomerase IB	A0A0U2TSJ7	Niemeyer_virus	3.5e-46	34.5
WP_041118552.1\|3832160_3833801_+	ABC-F family ATP-binding cassette domain-containing protein	A0A2K9L3Z8	Tupanvirus	5.7e-27	25.4
WP_011061699.1\|3833889_3834282_+	VOC family protein	NA	NA	NA	NA
WP_011061700.1\|3834302_3834623_-	YbjQ family protein	NA	NA	NA	NA
WP_011061701.1\|3834746_3834905_-	hypothetical protein	NA	NA	NA	NA
WP_015635899.1\|3835084_3835369_+	hypothetical protein	NA	NA	NA	NA
WP_019094152.1\|3835563_3835950_-	MliC family protein	NA	NA	NA	NA
WP_041118553.1\|3836450_3837050_-	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_080774197.1\|3838287_3838671_-	cytochrome c	NA	NA	NA	NA
WP_171820714.1\|3839168_3839504_-	hypothetical protein	NA	NA	NA	NA
WP_144404862.1\|3840965_3841292_+	hypothetical protein	NA	NA	NA	NA
WP_041118556.1\|3841485_3842166_+	molecular chaperone	NA	NA	NA	NA
WP_041118557.1\|3842189_3843173_+	fimbrial protein	NA	NA	NA	NA
WP_041118558.1\|3843439_3844147_+	SOS response-associated peptidase family protein	A0A2H4J991	uncultured_Caudovirales_phage	2.0e-109	80.8
WP_171820755.1\|3844566_3844911_-	hypothetical protein	NA	NA	NA	NA
WP_144404887.1\|3844937_3845375_-	structural protein P5	A0A2H4J6R1	uncultured_Caudovirales_phage	1.4e-33	52.8
WP_041118561.1\|3845539_3846229_-	hypothetical protein	NA	NA	NA	NA
WP_041118563.1\|3846515_3849602_-	host specificity protein J	Q3HQU5	Burkholderia_phage	5.3e-284	46.8
WP_041118564.1\|3849661_3850159_-	KilA-N domain-containing protein	Q9XJS9	Pseudomonas_phage	4.2e-58	63.4
WP_041118565.1\|3850589_3851162_-\|tail	tail assembly protein	A0A2I6PI69	Pseudomonas_phage	2.3e-47	54.9
WP_041118566.1\|3851171_3851936_-\|tail	phage tail protein	A0A2I6PI52	Pseudomonas_phage	3.4e-83	55.3
WP_041118567.1\|3851938_3852622_-\|tail	phage minor tail protein L	A0A2I6PIA7	Pseudomonas_phage	7.0e-88	66.5
WP_041120662.1\|3852666_3853440_-	hypothetical protein	A0A2H4J1J6	uncultured_Caudovirales_phage	7.2e-57	68.1
WP_041118568.1\|3854168_3854507_-\|tail	phage tail protein	A0A1B0VMG7	Pseudomonas_phage	1.3e-31	55.4
WP_041118569.1\|3854552_3857876_-\|tail	phage tail tape measure protein	A0A1B0VMG8	Pseudomonas_phage	1.6e-113	34.6
WP_041118570.1\|3857872_3858124_-	DUF1799 domain-containing protein	A0A2H4J4F7	uncultured_Caudovirales_phage	1.6e-18	56.4
WP_041118571.1\|3858189_3858570_-\|tail	phage tail assembly chaperone	A0A2H4IYQ5	uncultured_Caudovirales_phage	4.4e-31	53.5
WP_041118572.1\|3858573_3859227_-\|tail	phage tail protein	A0A1S5R1H0	Pseudomonas_phage	1.4e-53	49.8
WP_041118573.1\|3859299_3859716_-	DUF4128 domain-containing protein	A0A2H4J4N2	uncultured_Caudovirales_phage	4.8e-47	65.2
WP_041118574.1\|3859712_3860366_-	hypothetical protein	A0A1B0VMI1	Pseudomonas_phage	5.5e-106	88.0
WP_041118575.1\|3860362_3860734_-	hypothetical protein	A0A1B0VRJ4	Pseudomonas_phage	2.7e-49	77.2
WP_041120663.1\|3861214_3861739_+	hypothetical protein	NA	NA	NA	NA
WP_041118577.1\|3862097_3862601_-	hypothetical protein	A0A1B0VND3	Pseudomonas_phage	3.7e-78	88.0
WP_041118578.1\|3862604_3862913_-	hypothetical protein	A0A2H4J0G3	uncultured_Caudovirales_phage	4.2e-08	55.6
WP_041118579.1\|3862964_3863912_-	Ig domain-containing protein	A0A1B0VMF8	Pseudomonas_phage	8.1e-127	69.3
WP_041118580.1\|3863923_3864640_-	hypothetical protein	A0A2H4J0Y0	uncultured_Caudovirales_phage	4.7e-34	54.5
WP_041118581.1\|3864749_3865217_+	hypothetical protein	NA	NA	NA	NA
WP_041118582.1\|3865230_3866319_-\|capsid	minor capsid protein	A0A1B0VMF3	Pseudomonas_phage	4.0e-146	71.7
WP_041118583.1\|3866293_3867757_-	DUF4055 domain-containing protein	A0A2H4J5M6	uncultured_Caudovirales_phage	1.5e-172	62.9
WP_041118584.1\|3867753_3869055_-\|terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	1.1e-147	59.4
WP_041118585.1\|3869041_3869503_-	DUF2280 domain-containing protein	A0A1B0VMH2	Pseudomonas_phage	5.6e-49	71.1
WP_041120664.1\|3869533_3870142_-	hypothetical protein	A0A1B0VRJ1	Pseudomonas_phage	8.4e-101	87.0
WP_041118586.1\|3870211_3870409_+	hypothetical protein	A0A0S2SYV3	Pseudomonas_phage	8.1e-05	50.0
WP_041118587.1\|3870516_3871083_+	hypothetical protein	NA	NA	NA	NA
WP_041118588.1\|3871164_3871509_-	hypothetical protein	NA	NA	NA	NA
WP_041118589.1\|3871505_3871835_-	hypothetical protein	A0A088FVG2	Escherichia_phage	3.7e-18	47.2
WP_144404863.1\|3871833_3872364_+	hypothetical protein	NA	NA	NA	NA
WP_041118591.1\|3872418_3872631_-	hypothetical protein	NA	NA	NA	NA
WP_041118592.1\|3872837_3873524_-	hypothetical protein	NA	NA	NA	NA
WP_171820715.1\|3873582_3874128_-	HNH endonuclease	A0A2H4JH74	uncultured_Caudovirales_phage	3.5e-74	70.9
WP_041118593.1\|3874148_3874757_-	recombination protein NinG	A0A2H4JA27	uncultured_Caudovirales_phage	4.3e-73	69.1
WP_041118594.1\|3874756_3875344_-	DUF1367 family protein	Q9MC49	Pseudomonas_phage	6.6e-95	84.1
WP_041118595.1\|3875336_3876122_-	hypothetical protein	A0A1B0VMD9	Pseudomonas_phage	6.4e-53	50.0
WP_041118596.1\|3876111_3877014_-	helix-turn-helix domain-containing protein	A0A1B0VME0	Pseudomonas_phage	5.5e-48	72.4
WP_041118597.1\|3877065_3877488_-	Rha family transcriptional regulator	A0A2D1GNM7	Pseudomonas_phage	1.5e-32	50.7
WP_041118598.1\|3877569_3877773_-	helix-turn-helix domain-containing protein	A0A2H4JF66	uncultured_Caudovirales_phage	7.5e-22	76.1
WP_041120666.1\|3877889_3878678_+	XRE family transcriptional regulator	B5TK58	Pseudomonas_phage	5.8e-70	64.0
WP_041120667.1\|3878714_3879026_+	hypothetical protein	NA	NA	NA	NA
WP_041118599.1\|3879294_3879474_+	hypothetical protein	NA	NA	NA	NA
WP_080774199.1\|3879610_3880729_+	AAA family ATPase	R4TQL5	Phaeocystis_globosa_virus	5.3e-16	28.5

DBSCAN-SWA_3

3886342 : 3961454

uncultured_Caudovirales_phage(71.43%)

head,lysis,portal,capsid,terminase,tail,protease,holin,plate,integrase

attL 3890077:3890091|attR 3965967:3965981

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_171820716.1\|3886342_3886519_+	hypothetical protein	A0A0S2SY66	Pseudomonas_phage	2.6e-07	54.4
WP_041118605.1\|3886627_3887356_+	hypothetical protein	A0A2H4J2D5	uncultured_Caudovirales_phage	2.8e-95	74.3
WP_041118606.1\|3887352_3887916_+	siphovirus Gp157 family protein	A0A2H4IZG3	uncultured_Caudovirales_phage	3.1e-65	69.5
WP_041118607.1\|3887923_3888442_+	hypothetical protein	NA	NA	NA	NA
WP_041118608.1\|3888523_3888838_+	hypothetical protein	NA	NA	NA	NA
WP_041118609.1\|3889392_3890172_+	DUF2786 domain-containing protein	A0A2P9JZH4	Alteromonadaceae_phage	4.3e-17	31.5
3890077:3890091	attL	NA	NA	NA	NA
WP_041118610.1\|3890168_3891044_+	hypothetical protein	A0A2H4J418	uncultured_Caudovirales_phage	1.1e-93	55.2
WP_041118611.1\|3891045_3891957_-	hypothetical protein	NA	NA	NA	NA
WP_144404865.1\|3892006_3892636_+	hypothetical protein	NA	NA	NA	NA
WP_041118613.1\|3892638_3892881_-	hypothetical protein	A0A2H4J1H6	uncultured_Caudovirales_phage	1.6e-23	58.8
WP_041118614.1\|3893012_3893291_+	hypothetical protein	A0A1U8QJU8	Salmonella_virus	7.1e-23	57.6
WP_052470414.1\|3893537_3893942_+	hypothetical protein	H2BD40	Pseudomonas_phage	2.1e-47	75.5
WP_041118616.1\|3894055_3894436_+	hypothetical protein	NA	NA	NA	NA
WP_041118617.1\|3894470_3894677_+	DUF4224 domain-containing protein	NA	NA	NA	NA
WP_041118618.1\|3894678_3895710_+\|integrase	tyrosine-type recombinase/integrase	C8CLF4	Xylella_phage	8.6e-98	56.9
WP_015635906.1\|3896235_3896436_-	hypothetical protein	NA	NA	NA	NA
WP_041118619.1\|3896704_3896968_-	DUF1652 domain-containing protein	NA	NA	NA	NA
WP_015635908.1\|3897320_3897809_+	ATP-binding protein	A0A2H4JFX6	uncultured_Caudovirales_phage	1.1e-23	36.6
WP_041118620.1\|3898416_3899025_-	NAD(P)H-dependent oxidoreductase	NA	NA	NA	NA
WP_011061711.1\|3899118_3899760_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA
WP_041118621.1\|3899814_3900351_+	HD domain-containing protein	NA	NA	NA	NA
WP_171820756.1\|3900539_3901181_+	HAD family hydrolase	NA	NA	NA	NA
WP_011061714.1\|3901306_3901792_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041118623.1\|3901908_3903177_+	beta-ketoacyl-ACP synthase II	NA	NA	NA	NA
WP_041118624.1\|3903241_3903709_-	RcnB family protein	NA	NA	NA	NA
WP_041118625.1\|3903841_3904075_-	YceK/YidQ family lipoprotein	NA	NA	NA	NA
WP_041120670.1\|3904144_3904648_-	hypothetical protein	NA	NA	NA	NA
WP_041118626.1\|3904844_3905090_+	hypothetical protein	NA	NA	NA	NA
WP_015635915.1\|3905195_3905837_+	hypothetical protein	NA	NA	NA	NA
WP_041118627.1\|3905970_3906939_-	pyridoxal-phosphate dependent enzyme	NA	NA	NA	NA
WP_041118628.1\|3907166_3907640_+	hypothetical protein	NA	NA	NA	NA
WP_011061723.1\|3907730_3907868_-	hypothetical protein	NA	NA	NA	NA
WP_003083582.1\|3907929_3908070_-	hypothetical protein	NA	NA	NA	NA
WP_015635918.1\|3908362_3908836_+	hypothetical protein	NA	NA	NA	NA
WP_070100297.1\|3908956_3909118_+	DUF2986 domain-containing protein	NA	NA	NA	NA
WP_011061726.1\|3909561_3910125_+	hypothetical protein	NA	NA	NA	NA
WP_011061727.1\|3910150_3910546_+	hypothetical protein	NA	NA	NA	NA
WP_011061728.1\|3911066_3911753_+	methyltransferase domain-containing protein	NA	NA	NA	NA
WP_041118629.1\|3911760_3912810_+	hypothetical protein	NA	NA	NA	NA
WP_041118631.1\|3913672_3914719_+	hypothetical protein	NA	NA	NA	NA
WP_041118632.1\|3914873_3915254_+	hypothetical protein	NA	NA	NA	NA
WP_041118633.1\|3915471_3915831_-	hypothetical protein	NA	NA	NA	NA
WP_041118634.1\|3916120_3916603_+	hypothetical protein	NA	NA	NA	NA
WP_080644459.1\|3916892_3917855_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011061741.1\|3918000_3918384_-	hypothetical protein	NA	NA	NA	NA
WP_041118635.1\|3918451_3919429_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_041118636.1\|3919468_3920905_-	cytosine permease	NA	NA	NA	NA
WP_015635927.1\|3921183_3922113_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_041118637.1\|3923028_3924060_-	RNA-directed DNA polymerase	NA	NA	NA	NA
WP_144404866.1\|3925019_3927149_+	hypothetical protein	A5LH58	Enterobacteria_phage	2.0e-93	31.8
WP_144404867.1\|3927760_3928702_-	hypothetical protein	NA	NA	NA	NA
WP_041118638.1\|3929071_3929593_-\|lysis	lysis protein	A0A2H4JBH9	uncultured_Caudovirales_phage	2.7e-31	51.4
WP_041118639.1\|3929589_3930141_-	glycoside hydrolase family 19 protein	A0A2H4JHX4	uncultured_Caudovirales_phage	2.0e-69	74.7
WP_041118640.1\|3930168_3931212_-	phage late control protein	A0A2H4JBF6	uncultured_Caudovirales_phage	7.3e-153	77.5
WP_041118641.1\|3931273_3931480_-\|tail	tail protein X	A0A2H4J9Z9	uncultured_Caudovirales_phage	3.4e-22	70.1
WP_041118642.1\|3931454_3932300_-\|tail	phage tail protein	A0A2H4J875	uncultured_Caudovirales_phage	2.4e-98	64.3
WP_041118643.1\|3932309_3934874_-\|tail	phage tail tape measure protein	A0A2H4JG00	uncultured_Caudovirales_phage	6.3e-73	33.1
WP_041118644.1\|3935015_3935321_-\|tail	phage tail assembly protein	A0A2H4J873	uncultured_Caudovirales_phage	4.3e-21	60.2
WP_041118645.1\|3935332_3935842_-\|tail	phage major tail tube protein	A0A2H4JBU0	uncultured_Caudovirales_phage	3.3e-66	72.5
WP_041118646.1\|3935854_3937021_-\|tail	phage tail sheath family protein	A0A2H4J869	uncultured_Caudovirales_phage	2.9e-182	81.5
WP_080774201.1\|3937120_3937504_-	hypothetical protein	NA	NA	NA	NA
WP_080774202.1\|3937500_3939192_-\|tail	phage tail protein	A0A077K818	Ralstonia_phage	4.1e-89	55.0
WP_080774203.1\|3939188_3939878_-\|tail	phage tail protein I	A0A2H4JDH5	uncultured_Caudovirales_phage	6.2e-68	67.2
WP_041118647.1\|3939879_3940761_-\|plate	baseplate J/gp47 family protein	A0A2H4JFK9	uncultured_Caudovirales_phage	1.3e-97	63.4
WP_041118648.1\|3940757_3941084_-	GPW/gp25 family protein	A0A2H4JA09	uncultured_Caudovirales_phage	4.3e-35	66.7
WP_041118649.1\|3941088_3941304_-	hypothetical protein	NA	NA	NA	NA
WP_041118650.1\|3941347_3941938_-\|plate	phage baseplate assembly protein V	A0A2H4JG06	uncultured_Caudovirales_phage	1.1e-57	76.4
WP_041118651.1\|3941934_3942444_-	hypothetical protein	A0A2H4J881	uncultured_Caudovirales_phage	1.3e-46	54.8
WP_041118652.1\|3942436_3943090_-	hypothetical protein	A0A2H4JBV1	uncultured_Caudovirales_phage	3.1e-69	61.1
WP_041118653.1\|3943086_3943401_-	hypothetical protein	A0A2H4J879	uncultured_Caudovirales_phage	8.9e-30	62.1
WP_041118654.1\|3943403_3944399_-\|capsid	major capsid protein	A0A2H4J890	uncultured_Caudovirales_phage	6.9e-161	83.1
WP_041118655.1\|3944462_3944807_-\|head	head decoration protein	A0A2H4JF15	uncultured_Caudovirales_phage	1.1e-46	86.0
WP_041118656.1\|3944803_3945946_-\|protease	Clp protease ClpP	A0A2H4JDI2	uncultured_Caudovirales_phage	3.5e-140	70.7
WP_041118657.1\|3945942_3947424_-\|portal	phage portal protein	A0A2H4JFL5	uncultured_Caudovirales_phage	9.8e-236	80.9
WP_041118658.1\|3947423_3947630_-	hypothetical protein	A0A2H4JA19	uncultured_Caudovirales_phage	7.4e-25	83.8
WP_041118659.1\|3947631_3949644_-\|terminase	phage terminase large subunit family protein	A0A2H4J898	uncultured_Caudovirales_phage	0.0e+00	81.6
WP_041118660.1\|3949648_3950221_-	hypothetical protein	A0A2H4JG15	uncultured_Caudovirales_phage	1.5e-62	68.9
WP_080774204.1\|3950437_3950638_+	KTSC domain-containing protein	NA	NA	NA	NA
WP_144404868.1\|3950854_3951595_+	hypothetical protein	NA	NA	NA	NA
WP_041118661.1\|3951643_3951985_-\|holin	pyocin R2, holin	B5TK61	Pseudomonas_phage	3.4e-43	78.7
WP_041118662.1\|3952505_3952871_-	hypothetical protein	NA	NA	NA	NA
WP_041118663.1\|3952863_3955083_-	toprim domain-containing protein	A0A2D1GN57	Marinobacter_phage	6.4e-191	46.4
WP_041120677.1\|3955075_3955300_-	TraR/DksA family transcriptional regulator	A0A218M4I6	Erwinia_phage	1.8e-08	44.9
WP_171820717.1\|3955296_3955815_-	HNH endonuclease	L7THU3	Halovirus	4.4e-18	36.6
WP_041118664.1\|3955807_3956326_-	hypothetical protein	NA	NA	NA	NA
WP_080774206.1\|3956652_3956877_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA
WP_041118665.1\|3956978_3957728_+	helix-turn-helix transcriptional regulator	G9L676	Escherichia_phage	9.6e-30	52.5
WP_080774207.1\|3957805_3957985_+	hypothetical protein	NA	NA	NA	NA
WP_041118666.1\|3957981_3958566_+	hypothetical protein	NA	NA	NA	NA
WP_041118668.1\|3958575_3958860_+	DNA-binding protein	NA	NA	NA	NA
WP_041118669.1\|3959018_3959345_+	pyocin activator PrtN family protein	NA	NA	NA	NA
WP_041118670.1\|3959389_3959809_+	hypothetical protein	NA	NA	NA	NA
WP_041118671.1\|3960149_3960386_+	DUF4224 domain-containing protein	A0A2H4JF29	uncultured_Caudovirales_phage	1.1e-24	70.1
WP_052470417.1\|3960431_3961454_+\|integrase	tyrosine-type recombinase/integrase	A0A2H4JDJ8	uncultured_Caudovirales_phage	1.5e-110	60.7
3965967:3965981	attR	NA	NA	NA	NA

DBSCAN-SWA_4

4394391 : 4400611

uncultured_Caudovirales_phage(83.33%)

tRNA

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_041119039.1\|4394391_4394784_+	sulfurtransferase complex subunit TusD	A0A2H4JA39	uncultured_Caudovirales_phage	1.1e-53	78.3
WP_041119040.1\|4394785_4395148_+	sulfurtransferase complex subunit TusC	A0A2H4J8C0	uncultured_Caudovirales_phage	5.8e-41	70.0
WP_015636279.1\|4395147_4395444_+	sulfurtransferase complex subunit TusB	A0A2H4JG28	uncultured_Caudovirales_phage	1.9e-29	66.7
WP_041119041.1\|4395440_4395776_+	TusE/DsrC/DsvC family sulfur relay protein	A0A2H4J8B6	uncultured_Caudovirales_phage	1.4e-44	78.4
WP_041119042.1\|4395772_4396774_+	glycosyl transferase family protein	A0A2H4JBY5	uncultured_Caudovirales_phage	4.1e-169	86.8
WP_041119044.1\|4396862_4397864_+	glutathione S-transferase family protein	NA	NA	NA	NA
WP_041119046.1\|4397935_4399330_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA
WP_011062164.1\|4399330_4400611_-\|tRNA	serine--tRNA ligase	A0A1B1IVT2	uncultured_Mediterranean_phage	2.2e-98	54.1

DBSCAN-SWA_5

4487516 : 4531310

Lactobacillus_phage(25.0%)

protease,coat

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011062236.1\|4487516_4488506_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_041119102.1\|4488538_4490902_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA
WP_015636325.1\|4491021_4491813_-	molecular chaperone	NA	NA	NA	NA
WP_015636326.1\|4491859_4492360_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_015636327.1\|4492364_4492901_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_011062241.1\|4492921_4493458_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_015636329.1\|4493560_4494061_-\|coat	spore coat protein U domain-containing protein	NA	NA	NA	NA
WP_041119107.1\|4494301_4495432_+	cell division protein ZapE	NA	NA	NA	NA
WP_041119109.1\|4495428_4496043_+	hypothetical protein	NA	NA	NA	NA
WP_041119111.1\|4496029_4496398_+	hypothetical protein	NA	NA	NA	NA
WP_041119113.1\|4496487_4497801_+	protein kinase	NA	NA	NA	NA
WP_011062247.1\|4497866_4498571_-	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA
WP_041119115.1\|4498679_4500071_-	FAD-dependent oxidoreductase	NA	NA	NA	NA
WP_019095130.1\|4500169_4501495_-	MFS transporter	NA	NA	NA	NA
WP_041119117.1\|4501781_4502669_+	LysR family transcriptional regulator	A0A2P0ZL89	Lactobacillus_phage	7.9e-07	24.9
WP_041119119.1\|4502840_4503701_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_041119121.1\|4503811_4504921_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA
WP_015636337.1\|4505023_4505851_+	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA
WP_041119123.1\|4506052_4506607_+	cytochrome b	NA	NA	NA	NA
WP_041119124.1\|4506597_4507527_-	1-aminocyclopropane-1-carboxylate deaminase	NA	NA	NA	NA
WP_011062256.1\|4507715_4509755_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA
WP_011062257.1\|4509914_4511060_-	EstA family serine hydrolase	NA	NA	NA	NA
WP_041119125.1\|4511208_4512276_-	fatty acid desaturase	NA	NA	NA	NA
WP_041119129.1\|4512785_4513916_+	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA
WP_041119131.1\|4513920_4514961_+	AraC family transcriptional regulator	NA	NA	NA	NA
WP_041119133.1\|4515330_4516419_+	hypothetical protein	NA	NA	NA	NA
WP_041119135.1\|4516430_4516901_-	MarR family transcriptional regulator	NA	NA	NA	NA
WP_041119137.1\|4517061_4519737_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA
WP_015636345.1\|4519742_4520588_-	DUF2242 domain-containing protein	NA	NA	NA	NA
WP_011062266.1\|4520680_4521580_-	LysR family transcriptional regulator	NA	NA	NA	NA
WP_041119139.1\|4521704_4522910_+	MFS transporter	NA	NA	NA	NA
WP_041119141.1\|4522968_4523847_-	sterol desaturase family protein	NA	NA	NA	NA
WP_041119143.1\|4523913_4524879_+	AraC family transcriptional regulator ligand-binding domain-containing protein	NA	NA	NA	NA
WP_041119145.1\|4524948_4526820_-	SurA N-terminal domain-containing protein	NA	NA	NA	NA
WP_011062271.1\|4527046_4527319_-	HU family DNA-binding protein	A7KV42	Bacillus_phage	2.3e-18	57.3
WP_011062272.1\|4527467_4529864_-	endopeptidase La	A0A0R6PGP8	Moraxella_phage	1.5e-222	52.1
WP_011062273.1\|4530026_4531310_-\|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	G3M9Z9	Bacillus_virus	5.6e-139	59.8

DBSCAN-SWA_6

6268200 : 6327986

Burkholderia_phage(22.22%)

protease,holin

Protein_ID	Protein_Def	Hit_ID	Hit_Def	E-value	Identity
WP_011063889.1\|6268200_6268701_-\|protease	ATP-dependent zinc protease	NA	NA	NA	NA
WP_041120146.1\|6268938_6269826_+	acyltransferase	NA	NA	NA	NA
WP_041120147.1\|6269826_6270984_-	glutathionylspermidine synthase family protein	Q19CT2	Aeromonas_virus	6.1e-68	36.5
WP_041120148.1\|6270980_6271685_-	DUF1190 domain-containing protein	NA	NA	NA	NA
WP_041120149.1\|6271695_6272124_-	DUF350 domain-containing protein	NA	NA	NA	NA
WP_011063894.1\|6272262_6272829_-	DUF2780 domain-containing protein	NA	NA	NA	NA
WP_041120150.1\|6273052_6273697_+	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA
WP_041120151.1\|6273693_6274368_+	anti-sigma factor	NA	NA	NA	NA
WP_015637292.1\|6274518_6275082_+	hypothetical protein	NA	NA	NA	NA
WP_015637293.1\|6275145_6275460_-	type II toxin-antitoxin system YafQ family toxin	NA	NA	NA	NA
WP_015637294.1\|6275425_6275716_-	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA
WP_041120153.1\|6276168_6276438_+	hypothetical protein	NA	NA	NA	NA
WP_015637296.1\|6276538_6277738_-	formaldehyde dehydrogenase, glutathione-independent	A0A2K9L7I1	Tupanvirus	6.5e-12	28.9
WP_041120155.1\|6277909_6278767_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA
WP_041120156.1\|6278831_6279464_-	sarcosine oxidase subunit gamma family protein	NA	NA	NA	NA
WP_041120157.1\|6279600_6282618_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA
WP_041120158.1\|6282614_6282917_-	sarcosine oxidase subunit delta	NA	NA	NA	NA
WP_025131188.1\|6282931_6284182_-	sarcosine oxidase subunit beta family protein	NA	NA	NA	NA
WP_011063904.1\|6284205_6285459_-	serine hydroxymethyltransferase	A0A240F3L3	Aeromonas_phage	3.9e-100	53.2
WP_041120160.1\|6285771_6286512_-	conjugal transfer protein TraX	NA	NA	NA	NA
WP_015637302.1\|6286612_6287653_+	low specificity L-threonine aldolase	NA	NA	NA	NA
WP_041120161.1\|6287928_6289374_+	cytosine permease	NA	NA	NA	NA
WP_041120163.1\|6289370_6290198_+	carbon-nitrogen hydrolase	M1I5Z5	Acanthocystis_turfacea_Chlorella_virus	2.0e-20	30.6
WP_041120164.1\|6290276_6291377_-	glycine-betaine demethylase subunit GbcB	NA	NA	NA	NA
WP_011063910.1\|6291668_6292964_+	glycine-betaine demethylase subunit GbcA	NA	NA	NA	NA
WP_041120166.1\|6294202_6294973_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA
WP_041120168.1\|6294982_6296203_-	electron transfer flavoprotein subunit alpha/FixB family protein	NA	NA	NA	NA
WP_041120169.1\|6296202_6298152_-	dimethylglycine demethylation protein DgcB	NA	NA	NA	NA
WP_015637308.1\|6298266_6300327_-	dimethylglycine demethylation protein DgcA	NA	NA	NA	NA
WP_011063916.1\|6300342_6300873_-	hypothetical protein	NA	NA	NA	NA
WP_041120171.1\|6301034_6302012_-	membrane dipeptidase	NA	NA	NA	NA
WP_019095253.1\|6302247_6302649_+	DUF1311 domain-containing protein	NA	NA	NA	NA
WP_041120173.1\|6302757_6303108_-	hydroxyisourate hydrolase	NA	NA	NA	NA
WP_041120175.1\|6303104_6303614_-	nucleoside deaminase	NA	NA	NA	NA
WP_041120177.1\|6303669_6305007_-	purine permease	NA	NA	NA	NA
WP_011063922.1\|6305188_6306103_+	LysR family transcriptional regulator	NA	NA	NA	NA
WP_011063923.1\|6306202_6306457_+	type II toxin-antitoxin system RelE/ParE family toxin	A0A1S5NR91	Burkholderia_phage	6.1e-21	57.1
WP_015637312.1\|6306440_6306764_+	helix-turn-helix transcriptional regulator	A0A1S5NNJ5	Burkholderia_phage	1.2e-32	69.4
WP_041120178.1\|6306798_6307215_+	DUF3010 family protein	NA	NA	NA	NA
WP_041120179.1\|6307252_6308212_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_041120180.1\|6308406_6309351_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019095257.1\|6309439_6310327_+	3-keto-5-aminohexanoate cleavage protein	NA	NA	NA	NA
WP_041120181.1\|6310486_6311452_+	L-carnitine dehydrogenase	NA	NA	NA	NA
WP_041120182.1\|6311560_6312037_+	thioesterase family protein	NA	NA	NA	NA
WP_041120183.1\|6312061_6313222_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA
WP_041120184.1\|6313476_6313905_-	DUF4952 domain-containing protein	NA	NA	NA	NA
WP_015637320.1\|6314219_6314483_+	hypothetical protein	NA	NA	NA	NA
WP_041120185.1\|6314545_6314992_+	GNAT family N-acetyltransferase	NA	NA	NA	NA
WP_011063935.1\|6314992_6316096_-	GlxA family transcriptional regulator	NA	NA	NA	NA
WP_011063936.1\|6316508_6317885_-	L-serine ammonia-lyase	NA	NA	NA	NA
WP_011063937.1\|6318312_6319269_+\|holin	choline ABC transporter substrate-binding protein	NA	NA	NA	NA
WP_019095263.1\|6319339_6320185_+\|holin	choline ABC transporter permease subunit	NA	NA	NA	NA
WP_011063939.1\|6320181_6321360_+\|holin	choline ABC transporter ATP-binding protein	G3M9Y6	Bacillus_virus	1.6e-26	37.4
WP_011063940.1\|6321525_6323535_-	BCCT family transporter	A0A2I7QNT1	Vibrio_phage	1.2e-18	26.8
WP_011063941.1\|6323964_6324558_+	transcriptional regulator BetI	NA	NA	NA	NA
WP_041120187.1\|6324666_6326139_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA
WP_041120189.1\|6326282_6327986_+\|holin	choline dehydrogenase	A0A1V0S9M4	Catovirus	7.7e-51	30.1

Anti-CRISPR protein detection

Acr ID	Acr position	Acr size	Homology with known anti	Neighbor HTH/AcRanker	Neighbor Aca	In prophage	Protospacer in prophage

Overview of predicted results

Overview of the results

Cas Category Instructions

Results visualization

1. NZ_AP014522

Click the left colored region to show detailed information

CRISPR-Cas detection and classification

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Click the colored protein region to show detailed information

Self-targeting detection

MGE targeting detection<

Prophage detection

Anti-CRISPR protein detection